Query psy11701
Match_columns 745
No_of_seqs 365 out of 3814
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 16:43:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 6.1E-48 2.1E-52 421.6 56.6 451 32-497 4-474 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 9E-47 3.1E-51 412.4 50.5 446 32-493 100-564 (570)
3 2v5y_A Receptor-type tyrosine- 100.0 2.6E-47 8.9E-52 429.2 38.8 575 140-741 91-704 (731)
4 1e07_A Carcinoembryonic antige 100.0 3.2E-41 1.1E-45 375.6 60.7 503 40-596 118-635 (642)
5 2jll_A NCAM2, neural cell adhe 100.0 6.7E-42 2.3E-46 356.9 50.6 365 219-597 2-381 (389)
6 3kld_A Contactin 4, axcam, BIG 100.0 3.6E-43 1.2E-47 364.4 38.5 361 33-399 5-382 (384)
7 3laf_A Deleted in colorectal c 100.0 1.2E-42 4E-47 364.6 42.1 367 31-402 19-403 (403)
8 3dmk_A DOWN syndrome cell adhe 100.0 4.9E-40 1.7E-44 376.7 56.9 531 31-597 245-805 (816)
9 2v5m_A Dscam; neurobiology SPL 100.0 2.8E-42 9.6E-47 359.6 34.4 355 32-398 3-387 (388)
10 1cs6_A Axonin-1; neural cell a 100.0 1E-41 3.5E-46 354.5 37.5 358 33-399 4-381 (382)
11 1e07_A Carcinoembryonic antige 100.0 1.9E-38 6.5E-43 353.3 64.9 511 36-592 2-547 (642)
12 3p3y_A Neurofascin; IG domains 100.0 1.6E-41 5.4E-46 356.3 36.9 367 30-399 14-402 (404)
13 3dmk_A DOWN syndrome cell adhe 100.0 1.4E-39 4.9E-44 372.8 53.7 524 34-592 39-607 (816)
14 2v5y_A Receptor-type tyrosine- 100.0 9.6E-41 3.3E-45 375.7 42.9 454 233-743 91-566 (731)
15 1bih_A Hemolin; insect immunit 100.0 5.1E-41 1.7E-45 351.1 33.8 358 33-398 6-394 (395)
16 3qs7_E FL cytokine receptor; i 100.0 4.8E-41 1.7E-45 350.0 33.4 354 36-407 51-421 (423)
17 2ec8_A MAST/stem cell growth f 100.0 5.1E-41 1.7E-45 364.4 32.5 350 33-402 36-413 (524)
18 3qs9_E FL cytokine receptor; i 100.0 1.3E-39 4.4E-44 348.3 36.4 348 38-402 53-416 (527)
19 2ocw_A Polymeric-immunoglobuli 100.0 2.9E-38 1E-42 348.0 46.4 439 37-492 4-538 (585)
20 2rcj_C Light chain; immunoglob 100.0 5.4E-38 1.8E-42 340.5 40.3 361 36-397 3-417 (523)
21 2ec8_A MAST/stem cell growth f 100.0 1.1E-39 3.6E-44 354.0 26.6 362 33-405 115-515 (524)
22 3l5h_A Interleukin-6 receptor 100.0 3E-40 1E-44 363.8 18.4 534 130-740 8-589 (589)
23 3qs9_E FL cytokine receptor; i 100.0 3.8E-38 1.3E-42 337.0 31.0 341 43-401 149-511 (527)
24 2jll_A NCAM2, neural cell adhe 100.0 6.3E-36 2.2E-40 311.7 41.3 360 125-500 1-385 (389)
25 1z7z_I Intercellular adhesion 100.0 3E-37 1E-41 328.1 31.3 408 36-495 2-445 (450)
26 2ocw_A Polymeric-immunoglobuli 100.0 1.1E-35 3.7E-40 327.5 41.2 358 35-402 114-548 (585)
27 1z7z_I Intercellular adhesion 100.0 2.9E-36 9.8E-41 320.6 35.1 337 32-401 85-450 (450)
28 2rik_A Titin; I-SET IG fold, p 100.0 3.4E-35 1.2E-39 291.6 39.0 272 32-305 4-283 (284)
29 2rcj_C Light chain; immunoglob 100.0 4.7E-36 1.6E-40 325.2 32.1 351 34-388 115-512 (523)
30 1wio_A CD4, T-cell surface gly 100.0 7E-37 2.4E-41 315.0 23.5 311 42-398 3-361 (363)
31 1qgc_4 Protein (immunoglobulin 100.0 7.6E-37 2.6E-41 324.0 20.2 359 36-396 4-435 (438)
32 2yd9_A Receptor-type tyrosine- 100.0 4.4E-35 1.5E-39 293.7 30.9 275 32-310 5-295 (304)
33 3v2a_R Vascular endothelial gr 100.0 1.8E-37 6.3E-42 354.0 13.4 442 34-498 225-755 (772)
34 1qz1_A Neural cell adhesion mo 100.0 3.2E-34 1.1E-38 285.7 35.2 273 33-306 2-290 (291)
35 3v2a_R Vascular endothelial gr 100.0 6.5E-36 2.2E-40 341.2 18.2 435 39-491 132-653 (772)
36 2wim_A N-CAM 2, NCAM2, neural 100.0 5.7E-34 2E-38 283.9 29.9 275 32-308 3-286 (291)
37 3laf_A Deleted in colorectal c 100.0 5.6E-33 1.9E-37 291.0 33.2 273 33-308 121-403 (403)
38 2rik_A Titin; I-SET IG fold, p 100.0 3.3E-32 1.1E-36 270.0 36.6 274 123-399 3-283 (284)
39 1zlg_A Anosmin 1; insulin-like 100.0 5.5E-32 1.9E-36 299.4 37.3 417 280-743 133-634 (680)
40 1fnf_A Fibronectin; RGD, extra 100.0 4.3E-32 1.5E-36 280.1 33.7 315 401-738 1-368 (368)
41 3l5h_A Interleukin-6 receptor 100.0 1.4E-34 4.6E-39 318.7 15.5 409 313-742 9-495 (589)
42 3kld_A Contactin 4, axcam, BIG 100.0 3.9E-32 1.3E-36 281.4 32.4 264 39-306 108-383 (384)
43 2y25_A Myomesin; structural pr 100.0 1.6E-33 5.6E-38 284.6 20.8 272 32-306 6-315 (317)
44 1igt_B IGG2A intact antibody - 100.0 1.1E-33 3.6E-38 299.8 18.9 352 36-388 3-433 (444)
45 2yd9_A Receptor-type tyrosine- 100.0 1.5E-31 5.3E-36 267.9 31.4 273 123-403 4-294 (304)
46 3t1w_A Four-domain fibronectin 100.0 1.9E-31 6.5E-36 275.9 32.6 311 400-732 1-361 (375)
47 1cs6_A Axonin-1; neural cell a 100.0 2.6E-31 9E-36 275.9 31.8 261 39-305 107-381 (382)
48 2o26_X MAST/stem cell growth f 100.0 2.7E-32 9.2E-37 271.4 22.6 261 31-308 10-290 (290)
49 3qs7_E FL cytokine receptor; i 100.0 9.4E-32 3.2E-36 280.0 27.2 382 96-507 4-419 (423)
50 1hzh_H IGG, immunoglobulin hea 100.0 8.4E-33 2.9E-37 293.9 18.5 351 36-388 3-442 (457)
51 1qz1_A Neural cell adhesion mo 100.0 2.2E-30 7.4E-35 258.0 34.1 272 125-399 2-289 (291)
52 1iga_A IGA1; immunoglobulin; N 100.0 7.3E-31 2.5E-35 280.1 32.5 351 36-389 4-443 (475)
53 1ry7_B FGFR-3, fibroblast grow 100.0 7.2E-33 2.5E-37 281.9 15.5 273 32-308 7-329 (334)
54 3p3y_A Neurofascin; IG domains 100.0 4.1E-31 1.4E-35 276.9 27.5 270 33-306 116-403 (404)
55 3l5i_A Interleukin-6 receptor 100.0 3.1E-31 1.1E-35 263.6 24.9 281 401-740 3-290 (290)
56 1bih_A Hemolin; insect immunit 100.0 5.1E-31 1.7E-35 275.2 26.4 354 120-492 1-389 (395)
57 3oq3_B IFN-alpha/beta binding 100.0 1.7E-31 5.9E-36 270.3 22.0 266 33-304 29-328 (329)
58 3ejj_X Macrophage colony-stimu 100.0 1.2E-30 4E-35 259.7 27.4 267 32-308 3-283 (289)
59 4fqp_A Poliovirus receptor; im 100.0 1.1E-30 3.8E-35 262.7 26.4 270 36-308 3-306 (313)
60 2y23_A Myomesin; structural pr 100.0 6.3E-31 2.1E-35 264.9 24.1 261 42-305 10-311 (312)
61 2wim_A N-CAM 2, NCAM2, neural 100.0 6.2E-30 2.1E-34 254.7 29.3 273 124-402 3-286 (291)
62 3u83_A Poliovirus receptor-rel 100.0 2.4E-30 8.3E-35 262.9 26.5 277 28-308 9-322 (331)
63 3rjd_A High affinity immunoglo 100.0 6.4E-30 2.2E-34 250.3 28.5 238 35-296 3-249 (262)
64 1igy_B IGG1 intact antibody MA 100.0 7.1E-34 2.4E-38 300.0 0.1 350 37-388 3-423 (434)
65 2v5m_A Dscam; neurobiology SPL 100.0 4.8E-30 1.7E-34 267.0 28.2 347 125-492 3-382 (388)
66 3r8q_A Fibronectin; heparin, F 100.0 7.4E-30 2.5E-34 253.4 27.9 274 398-738 17-290 (290)
67 1tdq_A Tenascin-R; extracellul 100.0 8E-30 2.7E-34 252.4 27.5 269 395-733 8-279 (283)
68 3o4o_C Interleukin-1 receptor 100.0 1.2E-31 4.1E-36 273.3 13.8 270 34-304 19-333 (339)
69 4dep_C Interleukin-1 receptor 100.0 1.5E-30 5.2E-35 266.4 21.5 265 36-306 10-333 (349)
70 2nzi_A Titin; IG-domain, FNIII 100.0 1.3E-28 4.6E-33 246.8 33.8 280 217-504 3-296 (305)
71 1i1r_A GP130, interleukin-6 re 100.0 1.1E-29 3.6E-34 253.6 25.5 280 313-605 10-300 (303)
72 1itb_B Type 1 interleukin-1 re 100.0 8.6E-31 3E-35 264.1 16.4 260 41-305 13-313 (315)
73 3t1w_A Four-domain fibronectin 100.0 8.6E-28 2.9E-32 248.4 36.5 357 313-695 5-365 (375)
74 4fom_A Poliovirus receptor-rel 100.0 3.4E-30 1.2E-34 258.7 17.7 267 40-309 6-303 (308)
75 2y25_A Myomesin; structural pr 100.0 1.4E-29 4.8E-34 255.7 22.1 271 124-401 6-316 (317)
76 2oz4_A Intercellular adhesion 100.0 4.8E-29 1.6E-33 244.0 25.2 237 44-306 14-264 (265)
77 1zlg_A Anosmin 1; insulin-like 100.0 2.8E-28 9.7E-33 269.8 33.3 321 374-729 133-489 (680)
78 1zvo_C Myeloma immunoglobulin 100.0 8.9E-28 3.1E-32 257.4 36.1 348 36-389 3-492 (512)
79 2wng_A Tyrosine-protein phosph 100.0 2.8E-29 9.5E-34 254.2 21.9 262 33-296 3-309 (327)
80 4dkd_C Macrophage colony-stimu 100.0 8E-30 2.7E-34 254.1 17.3 266 32-308 3-283 (292)
81 2o26_X MAST/stem cell growth f 100.0 1.2E-28 4.3E-33 244.9 24.5 264 123-402 10-290 (290)
82 1fnf_A Fibronectin; RGD, extra 100.0 1.4E-27 4.9E-32 246.1 32.9 353 312-691 3-359 (368)
83 3oq3_B IFN-alpha/beta binding 100.0 1.2E-28 4.2E-33 249.4 23.5 260 133-398 37-328 (329)
84 3ejj_X Macrophage colony-stimu 100.0 4E-28 1.4E-32 241.3 24.0 268 124-401 3-282 (289)
85 1ry7_B FGFR-3, fibroblast grow 100.0 2E-29 6.7E-34 256.5 14.3 268 131-404 14-331 (334)
86 3mjg_X Beta-type platelet-deri 100.0 5.1E-28 1.8E-32 240.4 23.1 259 37-310 4-282 (289)
87 3vh8_G Killer cell immunoglobu 100.0 9.6E-29 3.3E-33 248.8 16.9 267 32-308 23-315 (316)
88 4fqp_A Poliovirus receptor; im 100.0 3.1E-27 1.1E-31 237.5 27.5 267 128-401 3-305 (313)
89 4dep_C Interleukin-1 receptor 100.0 4E-28 1.4E-32 248.4 20.1 269 132-400 14-333 (349)
90 2d9q_B Granulocyte colony-stim 100.0 5.5E-28 1.9E-32 242.3 20.2 280 315-606 8-307 (313)
91 3o4o_C Interleukin-1 receptor 100.0 5.8E-29 2E-33 253.5 13.1 276 121-397 14-332 (339)
92 3rjd_A High affinity immunoglo 100.0 7.8E-27 2.7E-31 228.3 27.8 241 125-390 1-249 (262)
93 2dtg_E Insulin receptor; IR ec 100.0 1.1E-28 3.7E-33 280.5 16.6 295 403-742 470-890 (897)
94 2nzi_A Titin; IG-domain, FNIII 100.0 1.9E-26 6.4E-31 231.2 31.0 251 33-297 4-281 (305)
95 1itb_B Type 1 interleukin-1 re 100.0 2.5E-28 8.6E-33 246.0 17.4 265 133-399 13-313 (315)
96 1wio_A CD4, T-cell surface gly 100.0 1.8E-27 6.2E-32 244.6 23.9 304 134-485 3-350 (363)
97 2wng_A Tyrosine-protein phosph 100.0 5.6E-27 1.9E-31 237.3 23.6 260 127-390 5-309 (327)
98 2y23_A Myomesin; structural pr 100.0 7.4E-27 2.5E-31 235.0 23.7 257 133-398 9-310 (312)
99 3u83_A Poliovirus receptor-rel 100.0 1.7E-26 5.7E-31 234.5 26.5 270 127-405 16-325 (331)
100 4dkd_C Macrophage colony-stimu 99.9 1.1E-27 3.6E-32 238.7 16.1 272 124-405 3-286 (292)
101 2oz4_A Intercellular adhesion 99.9 3.3E-26 1.1E-30 223.8 25.4 236 136-400 14-264 (265)
102 4fom_A Poliovirus receptor-rel 99.9 1.3E-26 4.3E-31 232.6 20.3 266 133-403 7-303 (308)
103 1n26_A IL-6 receptor alpha cha 99.9 1.4E-25 4.8E-30 225.6 27.2 276 312-604 11-295 (325)
104 3mjg_X Beta-type platelet-deri 99.9 2.6E-26 9.1E-31 228.0 20.9 266 126-405 1-283 (289)
105 1qgc_4 Protein (immunoglobulin 99.9 2.8E-27 9.5E-32 250.5 12.7 267 32-301 116-434 (438)
106 2wqr_A IG epsilon chain C regi 99.9 5.6E-27 1.9E-31 236.5 12.2 265 30-295 5-309 (323)
107 3se4_A Interferon alpha/beta r 99.9 1.9E-25 6.4E-30 232.6 22.4 357 322-743 20-412 (414)
108 3vh8_G Killer cell immunoglobu 99.9 3.8E-26 1.3E-30 229.8 16.7 261 116-389 15-297 (316)
109 1za6_B IGG heavy chain; immuno 99.9 2.6E-26 8.8E-31 233.8 15.6 257 36-294 3-329 (344)
110 2yd1_A Tyrosine-protein phosph 99.9 1.7E-24 5.8E-29 203.8 26.0 183 32-216 5-200 (212)
111 3f7q_A Integrin beta-4, GP150; 99.9 6.5E-25 2.2E-29 209.6 23.3 186 400-596 4-191 (234)
112 2a38_A Titin; Z1Z2, structural 99.9 1.3E-24 4.4E-29 201.7 23.8 180 33-214 5-193 (194)
113 1epf_A NCAM, protein (neural c 99.9 1.2E-24 4.2E-29 201.2 23.6 182 33-214 2-189 (191)
114 1cfb_A Drosophila neuroglian; 99.9 6.8E-25 2.3E-29 205.0 21.8 195 501-742 3-205 (205)
115 2v44_A NCAM2, neural cell adhe 99.9 8.6E-25 2.9E-29 201.8 22.2 180 34-214 3-185 (189)
116 2c5d_C AXL oncogene, tyrosine- 99.9 1.5E-24 5.1E-29 201.2 23.6 176 33-214 2-191 (195)
117 2iep_A Muscle-specific kinase 99.9 7.2E-25 2.5E-29 203.0 20.8 182 33-216 7-190 (192)
118 2wv3_A Neuroplastin; igcam, me 99.9 3.6E-24 1.2E-28 197.7 25.0 178 31-215 2-189 (190)
119 2yd6_A PTPRD protein; hydrolas 99.9 4E-24 1.4E-28 201.1 25.5 182 33-215 6-203 (212)
120 3p4l_A Neogenin; iron homeosta 99.9 1.3E-24 4.3E-29 204.2 20.8 195 400-601 3-202 (211)
121 1rhf_A Tyrosine-protein kinase 99.9 1.2E-24 4.2E-29 199.4 19.4 174 33-214 2-181 (182)
122 2j8h_A Titin, connectin; cardi 99.9 7.8E-24 2.7E-28 196.8 23.6 182 33-215 4-196 (197)
123 1igt_B IGG2A intact antibody - 99.9 8E-25 2.7E-29 231.6 17.7 272 12-293 109-432 (444)
124 2va4_A NCAM2, N-CAM 2, neural 99.9 1.8E-23 6.1E-28 193.6 23.6 181 32-214 2-191 (192)
125 3lcy_A Titin; A-BAND, IG tande 99.9 1.9E-23 6.4E-28 194.3 23.1 183 32-216 6-196 (197)
126 2vkw_A Neural cell adhesion mo 99.9 6.5E-24 2.2E-28 199.0 19.5 193 396-600 3-200 (209)
127 2v5t_A NCAM2, N-CAM 2, neural 99.9 2.9E-23 1E-27 191.6 23.4 181 33-215 2-187 (189)
128 1cfb_A Drosophila neuroglian; 99.9 1.3E-23 4.3E-28 196.4 20.7 192 398-599 2-199 (205)
129 3rbs_A Myomesin-1; immunoglobu 99.9 9.1E-24 3.1E-28 196.4 19.1 172 38-214 7-205 (207)
130 3p4l_A Neogenin; iron homeosta 99.9 8.2E-24 2.8E-28 198.7 18.3 192 502-741 3-205 (211)
131 1iga_A IGA1; immunoglobulin; N 99.9 2.6E-23 8.9E-28 221.6 24.1 274 12-295 113-443 (475)
132 2a38_A Titin; Z1Z2, structural 99.9 7.4E-23 2.5E-27 189.7 22.8 182 124-305 4-194 (194)
133 2iep_A Muscle-specific kinase 99.9 3.3E-23 1.1E-27 191.7 19.9 185 123-308 5-192 (192)
134 2yd1_A Tyrosine-protein phosph 99.9 1.4E-22 4.7E-27 190.6 24.3 184 124-308 5-202 (212)
135 2vr9_A Roundabout 1, ROBO; imm 99.9 4E-23 1.4E-27 195.3 20.6 185 30-215 6-205 (217)
136 2v9r_A Roundabout homolog 1; p 99.9 4.8E-23 1.7E-27 194.1 20.7 191 32-225 8-210 (212)
137 1hzh_H IGG, immunoglobulin hea 99.9 1.7E-24 5.8E-29 229.9 11.9 272 13-294 119-442 (457)
138 2q7n_A Leukemia inhibitory fac 99.9 5.5E-24 1.9E-28 220.9 15.4 284 303-606 199-486 (488)
139 4fa8_A Secreted protein BARF1; 99.9 8.2E-24 2.8E-28 195.3 14.7 166 42-208 2-194 (203)
140 2yd6_A PTPRD protein; hydrolas 99.9 1.6E-22 5.4E-27 190.2 23.3 186 123-308 4-206 (212)
141 2ibg_A CG9211-PA, GH03927P; IH 99.9 8.1E-23 2.8E-27 192.5 20.6 196 504-741 2-213 (214)
142 2vkw_A Neural cell adhesion mo 99.9 2.4E-23 8.2E-28 195.1 16.7 192 500-739 5-202 (209)
143 2wqr_A IG epsilon chain C regi 99.9 1.8E-24 6.1E-29 218.1 8.8 265 125-389 7-309 (323)
144 1i1r_A GP130, interleukin-6 re 99.9 2.1E-22 7.1E-27 200.7 23.5 230 461-741 63-302 (303)
145 3s98_A Interferon alpha/beta r 99.9 6.8E-23 2.3E-27 202.8 19.8 282 402-740 4-302 (306)
146 1za6_B IGG heavy chain; immuno 99.9 1.1E-23 3.7E-28 214.3 14.1 255 131-388 6-329 (344)
147 2wv3_A Neuroplastin; igcam, me 99.9 1E-21 3.6E-26 181.1 25.9 174 125-305 3-189 (190)
148 2j8h_A Titin, connectin; cardi 99.9 2.1E-22 7.3E-27 187.1 21.4 181 124-305 3-196 (197)
149 3k0w_A Mucosa-associated lymph 99.9 1.7E-22 5.8E-27 190.8 20.8 169 33-216 18-202 (218)
150 3s97_C Contactin-1; carbonic a 99.9 1.1E-22 3.6E-27 189.9 19.2 181 32-215 7-200 (201)
151 1igy_B IGG1 intact antibody MA 99.9 5E-25 1.7E-29 232.2 3.4 258 32-295 119-424 (434)
152 3lpw_A A77-A78 domain from tit 99.9 1.1E-22 3.7E-27 189.1 18.5 187 400-598 4-191 (197)
153 3sgj_C Human FCG3A receptor; r 99.9 1.2E-22 4E-27 188.8 18.3 164 34-216 8-174 (204)
154 1f97_A Junction adhesion molec 99.9 6.2E-23 2.1E-27 193.4 16.5 181 33-215 1-206 (212)
155 1tdq_A Tenascin-R; extracellul 99.9 1.9E-21 6.5E-26 192.1 27.7 258 312-596 16-279 (283)
156 3r8q_A Fibronectin; heparin, F 99.9 2.4E-21 8.3E-26 191.9 28.1 258 311-593 21-283 (290)
157 3lb6_C IL-13, interleukin-13 r 99.9 3E-22 1E-26 204.2 21.8 306 376-742 9-337 (380)
158 3f7q_A Integrin beta-4, GP150; 99.9 1.6E-22 5.3E-27 193.1 18.0 194 502-743 4-202 (234)
159 3ojm_B Fibroblast growth facto 99.9 2.9E-22 9.8E-27 191.6 19.8 175 41-216 27-221 (231)
160 3grw_A Fibroblast growth facto 99.9 4.1E-22 1.4E-26 191.8 20.8 176 40-216 22-218 (241)
161 3se4_A Interferon alpha/beta r 99.9 3.6E-22 1.2E-26 207.8 21.9 274 402-742 8-308 (414)
162 1fnl_A Low affinity immunoglob 99.9 3.2E-22 1.1E-26 181.5 18.3 165 32-215 6-173 (175)
163 2v9r_A Roundabout homolog 1; p 99.9 5.7E-22 1.9E-26 186.7 20.4 191 124-314 8-210 (212)
164 2r15_A Myomesin-1; sarcomeric 99.9 4.4E-22 1.5E-26 187.5 19.3 169 45-215 14-209 (212)
165 2c5d_C AXL oncogene, tyrosine- 99.9 8.3E-22 2.9E-26 182.6 20.5 176 125-304 2-191 (195)
166 1epf_A NCAM, protein (neural c 99.9 1.3E-21 4.6E-26 180.7 21.8 179 125-304 2-189 (191)
167 3lcy_A Titin; A-BAND, IG tande 99.9 1.2E-21 4.2E-26 182.0 20.9 183 122-306 4-196 (197)
168 3fl7_A Ephrin receptor; ATP-bi 99.9 2.2E-22 7.4E-27 210.1 17.3 219 474-741 306-534 (536)
169 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.9E-21 6.6E-26 179.3 21.7 180 125-305 2-187 (189)
170 2gys_A Cytokine receptor commo 99.9 4E-21 1.4E-25 200.3 26.7 311 372-739 80-419 (419)
171 3l5i_A Interleukin-6 receptor 99.9 9.4E-22 3.2E-26 195.0 20.9 217 368-600 65-287 (290)
172 1f2q_A High affinity immunoglo 99.9 2.2E-22 7.5E-27 182.9 14.4 165 33-216 4-171 (176)
173 2ibg_A CG9211-PA, GH03927P; IH 99.9 6.7E-22 2.3E-26 186.2 18.3 191 402-601 2-210 (214)
174 2x1w_L Vascular endothelial gr 99.9 1.7E-22 5.9E-27 189.8 14.1 180 39-221 13-211 (213)
175 2v44_A NCAM2, neural cell adhe 99.9 2.8E-21 9.5E-26 178.1 22.0 172 128-304 5-185 (189)
176 1zvo_C Myeloma immunoglobulin 99.9 8E-21 2.7E-25 203.4 28.9 273 12-295 120-492 (512)
177 3jz7_A MCAR, CAR, coxsackievir 99.9 6E-22 2E-26 186.9 17.2 177 37-215 4-211 (214)
178 2vr9_A Roundabout 1, ROBO; imm 99.9 1.4E-21 4.7E-26 184.7 19.7 183 123-305 7-205 (217)
179 1vca_A VCAM-D1,2, human vascul 99.9 1.8E-21 6E-26 180.5 19.2 178 37-219 4-199 (202)
180 3bpo_C Interleukin-13 receptor 99.9 5.5E-21 1.9E-25 191.2 24.3 291 402-741 4-313 (314)
181 1rhf_A Tyrosine-protein kinase 99.9 1.7E-21 5.8E-26 178.4 18.9 173 125-304 2-181 (182)
182 2d3v_A Leukocyte immunoglobuli 99.9 2.7E-22 9.3E-27 185.8 13.6 169 33-205 5-181 (196)
183 1nbq_A JAM, junctional adhesio 99.9 1.2E-22 4.1E-27 190.9 11.0 175 33-209 4-200 (209)
184 4fa8_A Secreted protein BARF1; 99.9 1.6E-22 5.3E-27 186.7 11.5 164 134-298 2-194 (203)
185 3p2t_A Leukocyte immunoglobuli 99.9 3.3E-22 1.1E-26 185.3 13.3 167 34-204 6-179 (196)
186 1qr4_A Protein (tenascin); fib 99.9 2.5E-21 8.6E-26 177.5 18.8 179 502-739 5-183 (186)
187 3rbs_A Myomesin-1; immunoglobu 99.9 2.2E-21 7.5E-26 180.2 18.5 174 126-304 4-205 (207)
188 2gee_A Hypothetical protein; f 99.9 1.3E-21 4.4E-26 181.9 16.8 184 500-738 20-203 (203)
189 2va4_A NCAM2, N-CAM 2, neural 99.9 1.8E-20 6.2E-25 173.2 23.6 178 125-305 2-192 (192)
190 1uct_A Immunoglobulin alpha FC 99.9 5.4E-22 1.8E-26 186.2 13.0 164 34-203 10-180 (218)
191 1ugn_A LIR1, leukocyte immunog 99.9 7.2E-22 2.5E-26 183.3 13.7 168 33-204 5-181 (198)
192 3ry4_A Low affinity immunoglob 99.9 3.2E-21 1.1E-25 174.2 17.4 163 33-214 4-169 (170)
193 1bqu_A Protein (GP130); cytoki 99.9 9.1E-22 3.1E-26 185.3 14.0 197 398-605 4-204 (215)
194 2ifg_A High affinity nerve gro 99.9 4.4E-22 1.5E-26 202.5 12.6 179 33-216 158-345 (347)
195 3ojm_B Fibroblast growth facto 99.9 4.8E-21 1.6E-25 183.1 19.0 188 123-310 13-225 (231)
196 3k0w_A Mucosa-associated lymph 99.9 8.2E-21 2.8E-25 179.1 20.2 171 124-307 17-203 (218)
197 2gi7_A GPVI protein; IG-like d 99.9 1.2E-21 4.1E-26 179.2 13.8 157 33-204 8-168 (184)
198 3lpw_A A77-A78 domain from tit 99.9 4.2E-21 1.4E-25 178.3 17.4 186 502-738 4-194 (197)
199 3grw_A Fibroblast growth facto 99.9 8.4E-21 2.9E-25 182.6 20.0 188 124-311 10-223 (241)
200 3b5h_A Cervical EMMPRIN, HAB18 99.9 8.2E-21 2.8E-25 174.1 18.7 164 43-215 8-182 (184)
201 1qr4_A Protein (tenascin); fib 99.9 1.1E-20 3.7E-25 173.3 19.2 174 398-594 3-176 (186)
202 3s97_C Contactin-1; carbonic a 99.9 1E-20 3.6E-25 176.3 19.4 177 129-305 12-200 (201)
203 3fl7_A Ephrin receptor; ATP-bi 99.9 2.4E-22 8.2E-27 209.8 9.1 216 373-601 304-531 (536)
204 2gee_A Hypothetical protein; f 99.9 7.5E-21 2.6E-25 176.7 18.1 177 400-595 22-198 (203)
205 3r4d_A CEA-related cell adhesi 99.9 1.1E-20 3.7E-25 177.2 19.3 174 37-215 3-199 (208)
206 3bp6_B Programmed cell death 1 99.9 1.1E-20 3.7E-25 176.1 18.8 174 36-215 5-192 (202)
207 3sgj_C Human FCG3A receptor; r 99.9 7.2E-21 2.5E-25 176.7 17.4 168 124-308 6-176 (204)
208 1oll_A NK receptor; immune sys 99.9 1.9E-21 6.6E-26 178.5 13.2 163 34-203 5-172 (188)
209 2ha1_A Fibronectin; beta sandw 99.9 5.4E-21 1.9E-25 177.7 15.9 179 506-738 2-201 (201)
210 1f97_A Junction adhesion molec 99.9 9.8E-21 3.4E-25 178.2 17.8 180 126-306 2-207 (212)
211 2fbo_J V1V2;, variable region- 99.9 8.8E-21 3E-25 183.7 17.4 177 37-213 6-249 (250)
212 2ny1_B T-cell surface glycopro 99.9 5.3E-21 1.8E-25 175.2 14.6 159 41-217 3-180 (184)
213 3mj6_A Junctional adhesion mol 99.8 1.3E-20 4.4E-25 184.6 17.5 197 36-237 8-258 (268)
214 2d9q_B Granulocyte colony-stim 99.8 8E-20 2.7E-24 182.8 23.4 273 225-505 7-311 (313)
215 1bqu_A Protein (GP130); cytoki 99.8 2E-20 6.7E-25 176.2 17.5 192 502-742 6-207 (215)
216 1hng_A CD2; T lymphocyte adhes 99.8 4.1E-21 1.4E-25 173.6 12.3 157 42-214 5-174 (176)
217 2r15_A Myomesin-1; sarcomeric 99.8 2.7E-20 9.3E-25 175.1 18.5 168 138-306 15-210 (212)
218 2ha1_A Fibronectin; beta sandw 99.8 1.9E-20 6.4E-25 174.0 16.6 176 404-595 2-195 (201)
219 1vca_A VCAM-D1,2, human vascul 99.8 4E-20 1.4E-24 171.4 18.4 177 129-309 4-200 (202)
220 1fnl_A Low affinity immunoglob 99.8 4.2E-20 1.4E-24 167.4 18.1 166 124-306 6-174 (175)
221 2c1o_A IGK-C protein; FAB frag 99.8 5.8E-21 2E-25 185.2 12.7 198 94-295 11-244 (254)
222 3p2t_A Leukocyte immunoglobuli 99.8 1.5E-20 5.1E-25 174.1 14.6 167 124-294 4-179 (196)
223 3mj8_L Stimulatory hamster ant 99.8 1.1E-20 3.8E-25 177.9 13.9 169 42-210 9-207 (213)
224 1f2q_A High affinity immunoglo 99.8 1.3E-20 4.6E-25 171.0 13.9 169 123-308 2-173 (176)
225 2x1w_L Vascular endothelial gr 99.8 5.1E-20 1.7E-24 172.9 18.2 177 131-310 13-211 (213)
226 1b6u_A KIR2DL3, P58 killer cel 99.8 5.8E-21 2E-25 183.1 11.7 214 35-256 9-240 (257)
227 1n26_A IL-6 receptor alpha cha 99.8 8.5E-20 2.9E-24 183.4 20.6 268 220-499 8-295 (325)
228 3d9a_L Light chain of hyhel10 99.8 1.5E-20 5.2E-25 176.9 14.3 170 36-205 4-202 (213)
229 2d3v_A Leukocyte immunoglobuli 99.8 1.8E-20 6.1E-25 173.5 14.5 169 123-295 3-181 (196)
230 1uct_A Immunoglobulin alpha FC 99.8 1.3E-20 4.5E-25 176.8 13.7 180 124-306 8-198 (218)
231 3jz7_A MCAR, CAR, coxsackievir 99.8 1.5E-20 5.3E-25 177.1 14.0 176 131-307 6-213 (214)
232 1jbj_A CD3 epsilon and gamma e 99.8 5.6E-21 1.9E-25 174.8 10.3 145 43-206 9-179 (186)
233 1ugn_A LIR1, leukocyte immunog 99.8 1.9E-20 6.3E-25 173.8 14.0 167 124-294 4-181 (198)
234 1lk3_L 9D7 light chain; antige 99.8 2.4E-20 8.4E-25 174.9 14.9 168 38-205 5-201 (210)
235 3n06_B PRL-R, prolactin recept 99.8 9.4E-20 3.2E-24 170.5 18.2 196 502-744 2-208 (210)
236 4f80_A Butyrophilin subfamily 99.8 1.8E-19 6E-24 171.2 20.3 172 41-215 12-212 (226)
237 1nkr_A P58-CL42 KIR; inhibitor 99.8 4.7E-20 1.6E-24 171.4 14.9 164 34-203 9-184 (201)
238 1q0x_L FAB 9B1, light chain; a 99.8 6.1E-20 2.1E-24 172.5 15.8 170 39-208 6-207 (212)
239 3sbw_C Programmed cell death 1 99.8 7.3E-20 2.5E-24 173.5 16.4 176 39-216 7-211 (222)
240 1oll_A NK receptor; immune sys 99.8 2.8E-20 9.5E-25 170.7 12.6 165 125-293 4-172 (188)
241 2gi7_A GPVI protein; IG-like d 99.8 3.5E-20 1.2E-24 169.4 12.8 159 123-294 6-168 (184)
242 3nl4_L Antigen binding fragmen 99.8 7E-20 2.4E-24 172.3 15.1 165 36-200 4-198 (213)
243 3bp6_B Programmed cell death 1 99.8 1.5E-19 5.2E-24 168.4 17.1 172 131-307 8-194 (202)
244 2pet_A Lutheran blood group gl 99.8 3.1E-20 1.1E-24 177.3 12.4 165 37-202 4-211 (231)
245 3b5h_A Cervical EMMPRIN, HAB18 99.8 6.4E-19 2.2E-23 161.4 20.6 162 135-306 8-183 (184)
246 1nqb_A Single-chain antibody f 99.8 7.2E-20 2.5E-24 177.0 14.9 183 36-218 3-235 (256)
247 1p6f_A NKP46, natural cytotoxi 99.8 7.6E-20 2.6E-24 174.1 14.6 176 34-216 8-191 (242)
248 1mq8_A ICAM-1, intercellular a 99.8 3E-20 1E-24 179.6 11.7 258 37-306 3-282 (291)
249 3mtr_A N-CAM-1, NCAM-1, neural 99.8 1.3E-18 4.4E-23 163.8 22.6 189 307-501 19-211 (215)
250 4frw_A Poliovirus receptor-rel 99.8 1.1E-19 3.8E-24 171.8 15.0 178 37-214 3-209 (218)
251 1nbq_A JAM, junctional adhesio 99.8 2.1E-20 7.2E-25 175.5 9.6 173 125-298 4-199 (209)
252 2ifg_A High affinity nerve gro 99.8 3.9E-20 1.3E-24 188.1 11.9 200 98-308 136-347 (347)
253 2fbo_J V1V2;, variable region- 99.8 2.2E-19 7.7E-24 173.7 16.4 174 130-303 7-249 (250)
254 1cd9_B G-CSF-R, protein (G-CSF 99.8 2.4E-19 8.2E-24 168.6 16.1 196 400-605 3-212 (215)
255 3pv7_A B7-H6, IG-like domain-c 99.8 1.7E-19 5.9E-24 174.1 14.9 186 33-222 3-230 (248)
256 1sy6_A T-cell surface glycopro 99.8 3.3E-20 1.1E-24 172.1 9.4 154 45-213 15-201 (204)
257 2if7_A SLAM family member 6; N 99.8 1.1E-18 3.6E-23 160.6 19.4 157 39-209 4-185 (193)
258 3s96_B 3B5H10 FAB light chain; 99.8 2.1E-19 7.2E-24 169.8 15.1 171 38-209 6-213 (218)
259 1gsm_A Madcam-1, mucosal addre 99.8 1.9E-18 6.3E-23 157.0 20.5 155 43-204 17-193 (210)
260 3r06_A Anti-mouse CD3epsilon a 99.8 2.7E-19 9.4E-24 168.2 15.2 169 36-204 4-201 (213)
261 2ny1_B T-cell surface glycopro 99.8 4.3E-19 1.5E-23 162.5 15.8 160 134-308 4-181 (184)
262 3ry4_A Low affinity immunoglob 99.8 5.6E-19 1.9E-23 159.4 16.3 163 125-304 4-169 (170)
263 2c1o_A IGK-C protein; FAB frag 99.8 1.7E-19 5.7E-24 174.9 13.6 173 33-205 38-244 (254)
264 3r4d_A CEA-related cell adhesi 99.8 5.3E-19 1.8E-23 165.6 16.5 176 130-308 4-202 (208)
265 1c1e_H Catalytic antibody 1E9 99.8 2.3E-19 8E-24 169.5 14.0 175 36-211 3-215 (219)
266 2zg1_A Sialic acid-binding IG- 99.8 6.5E-19 2.2E-23 165.9 16.6 162 37-206 4-203 (214)
267 3tv3_L PGT128 light chain, IG 99.8 1.5E-19 5.1E-24 169.7 12.0 167 42-210 9-205 (211)
268 1f3r_B FV antibody fragment; I 99.8 1.8E-19 6.3E-24 174.6 12.8 168 36-203 3-232 (257)
269 1cd9_B G-CSF-R, protein (G-CSF 99.8 2.8E-18 9.6E-23 161.2 20.4 196 502-742 3-215 (215)
270 2ghw_B Anti-SARS SCFV antibody 99.8 1.5E-18 5.1E-23 167.4 18.8 169 36-204 5-229 (247)
271 2xzc_L FAB A.17 light chain; i 99.8 4.7E-19 1.6E-23 167.0 14.4 167 39-205 6-204 (216)
272 3e0g_A Leukemia inhibitory fac 99.8 2E-18 7E-23 177.5 20.2 270 311-605 202-480 (483)
273 1nfd_E H57 FAB; complex (immun 99.8 4.8E-20 1.6E-24 173.2 7.4 167 39-205 5-201 (212)
274 2dtg_E Insulin receptor; IR ec 99.8 6E-20 2E-24 208.8 9.5 232 363-601 548-886 (897)
275 3sob_L Antibody light chain; b 99.8 7.9E-19 2.7E-23 168.3 15.7 172 34-205 25-225 (237)
276 1dr9_A B7-1 (CD80), T lymphocy 99.8 5E-19 1.7E-23 164.7 13.5 164 42-211 3-196 (201)
277 1hnf_A CD2; T lymphocyte adhes 99.8 1.2E-18 4E-23 157.2 15.3 154 40-212 6-177 (182)
278 2p1y_A Bispecific alpha/beta T 99.8 2E-18 6.7E-23 165.5 17.7 167 36-203 3-222 (238)
279 4i0k_A CD276 antigen; immunogl 99.8 1.4E-19 4.7E-24 171.6 9.5 173 41-216 3-206 (222)
280 3mj6_A Junctional adhesion mol 99.8 1E-18 3.5E-23 171.0 15.6 193 126-324 6-256 (268)
281 3gkz_A Anti-methamphetamine si 99.8 2.2E-18 7.6E-23 167.1 17.4 185 31-215 6-248 (257)
282 3bkj_L WO2 IGG2A FAB fragment 99.8 7.1E-19 2.4E-23 170.0 13.4 173 33-205 34-240 (252)
283 1mju_H Immunoglobulin MS6-12; 99.8 1E-18 3.5E-23 165.6 14.0 179 36-215 3-216 (227)
284 3sbw_C Programmed cell death 1 99.8 3.6E-18 1.2E-22 161.8 17.7 177 131-309 7-214 (222)
285 3mj8_L Stimulatory hamster ant 99.8 7.1E-19 2.4E-23 165.4 12.6 173 127-300 3-207 (213)
286 3uzq_A Anti-dengue MAB 4E11; d 99.8 4.7E-19 1.6E-23 171.4 11.5 181 36-216 4-244 (253)
287 1p6f_A NKP46, natural cytotoxi 99.8 9.7E-19 3.3E-23 166.4 13.4 180 124-307 6-192 (242)
288 3n06_B PRL-R, prolactin recept 99.8 2.9E-18 1E-22 160.3 16.3 187 400-600 2-201 (210)
289 4fmk_A Poliovirus receptor-rel 99.8 1.3E-18 4.5E-23 165.2 14.2 178 38-215 6-218 (225)
290 4frw_A Poliovirus receptor-rel 99.8 4.2E-18 1.4E-22 160.8 17.4 175 130-304 4-209 (218)
291 1qok_A MFE-23 recombinant anti 99.8 2.5E-18 8.6E-23 168.9 15.6 181 34-215 27-267 (282)
292 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 8.9E-18 3E-22 162.6 19.2 172 35-207 5-237 (256)
293 3umt_A SCFV heavy chain and li 99.8 1.8E-18 6.3E-23 167.5 14.4 181 36-216 5-245 (256)
294 1hng_A CD2; T lymphocyte adhes 99.8 1.8E-18 6E-23 156.3 13.2 158 134-304 5-174 (176)
295 1ccz_A Protein (CD58); LFA-3, 99.8 1.9E-18 6.5E-23 154.9 13.3 150 41-212 3-167 (171)
296 2vol_A Murine IGG FC; FC, zinc 99.8 4.3E-19 1.5E-23 165.5 9.3 172 33-204 2-196 (207)
297 1jbj_A CD3 epsilon and gamma e 99.8 1E-18 3.5E-23 159.7 11.4 145 136-296 10-179 (186)
298 1pz5_B Heavy chain of FAB (SYA 99.8 2.6E-18 9E-23 162.3 14.6 174 36-210 3-215 (220)
299 4f80_A Butyrophilin subfamily 99.8 3.3E-18 1.1E-22 162.4 15.2 172 133-307 12-214 (226)
300 3d9a_H Heavy chain of hyhel10 99.8 7.6E-19 2.6E-23 164.6 10.6 170 36-208 3-206 (210)
301 2dru_A Chimera of CD48 antigen 99.8 4.9E-18 1.7E-22 153.7 15.5 153 41-211 7-176 (180)
302 3juy_B 3B3 single chain varian 99.8 4.7E-18 1.6E-22 164.7 16.4 174 31-204 4-244 (256)
303 4go6_B HCF C-terminal chain 1; 99.8 1.2E-18 4.1E-23 164.7 11.7 164 430-597 17-195 (232)
304 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 8.4E-19 2.9E-23 166.0 10.6 175 36-211 3-218 (222)
305 3esu_F Antibody 14B7* light ch 99.8 4.3E-18 1.5E-22 164.5 15.6 167 35-201 6-231 (250)
306 2rgs_A I, IG gamma-2B heavy ch 99.8 2.9E-19 9.9E-24 168.2 7.0 175 30-204 7-204 (218)
307 3auv_A SC-DSFV derived from th 99.8 4E-18 1.4E-22 167.0 15.5 170 33-202 12-235 (276)
308 3bqu_C 3H6 FAB light chain; be 99.8 1.7E-19 5.9E-24 172.3 5.5 171 34-204 24-223 (233)
309 3eow_R Poliovirus receptor; im 99.8 2E-19 7E-24 170.1 5.8 174 39-213 5-209 (221)
310 2if7_A SLAM family member 6; N 99.8 1.5E-17 5.2E-22 152.9 18.1 160 131-299 4-185 (193)
311 1moe_A Anti-CEA MAB T84.66; an 99.8 3.8E-18 1.3E-22 163.7 14.4 166 36-201 4-219 (240)
312 3shs_A HOC head outer capsid p 99.8 2.7E-16 9.3E-21 142.4 25.0 235 36-290 5-278 (304)
313 3s96_B 3B5H10 FAB light chain; 99.8 7E-18 2.4E-22 159.3 15.4 173 126-299 2-213 (218)
314 2znx_A SCFV; fluorotryptohpan, 99.8 3.8E-18 1.3E-22 163.6 13.7 166 36-201 4-221 (242)
315 2q7n_A Leukemia inhibitory fac 99.8 3.2E-17 1.1E-21 170.2 21.3 267 218-502 203-487 (488)
316 1mq8_A ICAM-1, intercellular a 99.8 3.7E-18 1.3E-22 164.9 13.3 260 128-401 2-283 (291)
317 1b6u_A KIR2DL3, P58 killer cel 99.8 1.4E-18 4.8E-23 166.5 10.0 216 123-347 5-240 (257)
318 2fbj_H IGA-kappa J539 FAB (hea 99.8 1.2E-17 4E-22 157.4 15.9 171 36-207 3-212 (220)
319 1op3_H FAB 2G12, heavy chain; 99.8 6.4E-18 2.2E-22 160.0 14.0 170 36-207 3-216 (225)
320 1dee_B IGM RF 2A2; FAB-IBP com 99.8 2.7E-17 9.4E-22 155.3 17.8 174 36-209 3-220 (223)
321 2j6e_L IGM, FAB light chain; a 99.7 7E-19 2.4E-23 168.2 6.7 169 40-208 26-227 (234)
322 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.1E-17 3.7E-22 155.3 14.4 166 122-293 5-184 (201)
323 3d9a_L Light chain of hyhel10 99.7 4.4E-18 1.5E-22 160.0 11.5 169 128-296 4-203 (213)
324 1svz_A Immunoglobulin;, single 99.7 1.5E-17 5.2E-22 160.2 15.1 167 36-202 4-228 (247)
325 2pet_A Lutheran blood group gl 99.7 8.2E-18 2.8E-22 160.5 13.1 163 130-292 5-211 (231)
326 4dzb_B Vbeta2 (MAIT T cell rec 99.7 8.6E-18 3E-22 161.9 13.3 170 36-205 4-220 (246)
327 3bpo_C Interleukin-13 receptor 99.7 6.6E-17 2.2E-21 161.5 20.1 226 366-598 55-304 (314)
328 2p1y_A Bispecific alpha/beta T 99.7 1.8E-17 6.1E-22 158.8 15.3 165 128-293 3-222 (238)
329 3nl4_L Antigen binding fragmen 99.7 1.3E-17 4.5E-22 156.7 13.7 165 126-290 2-198 (213)
330 2gjj_A A21 single-chain antibo 99.7 1.4E-17 4.7E-22 161.7 14.2 170 33-202 5-239 (264)
331 2gki_A Nuclease; anti-DNA anti 99.7 1.8E-17 6.1E-22 163.5 14.8 169 36-204 25-259 (291)
332 2w59_A IGY FCU3-4; immunoglobu 99.7 2.8E-18 9.5E-23 162.8 7.8 174 27-204 7-216 (231)
333 3bae_H WO2 IGG2A FAB fragment 99.7 1.3E-17 4.3E-22 158.3 12.2 172 37-209 4-219 (228)
334 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 3.7E-17 1.3E-21 159.4 15.8 169 34-202 16-254 (268)
335 1sy6_A T-cell surface glycopro 99.7 7.5E-18 2.6E-22 156.2 10.3 153 137-304 15-202 (204)
336 3pv7_A B7-H6, IG-like domain-c 99.7 2.2E-17 7.5E-22 159.3 14.0 172 131-304 9-224 (248)
337 3e0g_A Leukemia inhibitory fac 99.7 2E-16 6.9E-21 162.7 21.8 193 503-742 281-483 (483)
338 1lk3_L 9D7 light chain; antige 99.7 9.7E-18 3.3E-22 157.1 10.8 164 132-295 7-201 (210)
339 3ux9_B SCFV antibody; five hel 99.7 3E-17 1E-21 159.1 14.6 166 38-203 7-236 (256)
340 4fmk_A Poliovirus receptor-rel 99.7 1.1E-16 3.7E-21 151.9 18.0 174 132-305 8-218 (225)
341 3nfj_J T cell receptor beta ch 99.7 4.3E-17 1.5E-21 156.8 15.3 170 36-205 4-219 (245)
342 1f3r_B FV antibody fragment; I 99.7 2.4E-17 8.3E-22 159.6 13.5 177 132-308 7-247 (257)
343 4i0k_A CD276 antigen; immunogl 99.7 1.4E-17 4.7E-22 157.7 11.3 176 134-311 4-211 (222)
344 1i1c_A IGG2A, IG gamma-2A chai 99.7 4.7E-18 1.6E-22 161.6 8.0 174 31-204 14-210 (239)
345 1dn0_B IGM-kappa cold agglutin 99.7 6.8E-17 2.3E-21 153.5 15.9 179 36-214 3-225 (232)
346 3tv3_L PGT128 light chain, IG 99.7 1.4E-17 4.9E-22 156.1 11.0 169 129-300 5-205 (211)
347 3d85_D IL-12B, interleukin-12 99.7 7.4E-17 2.5E-21 158.5 16.4 244 320-598 19-302 (306)
348 2ghw_B Anti-SARS SCFV antibody 99.7 1E-16 3.4E-21 154.5 17.1 174 132-305 9-241 (247)
349 3s98_A Interferon alpha/beta r 99.7 1.4E-16 4.8E-21 157.4 18.5 215 369-601 66-300 (306)
350 2zg1_A Sialic acid-binding IG- 99.7 1.5E-16 5.2E-21 149.5 17.8 163 129-296 4-203 (214)
351 3nl4_H Antigen binding fragmen 99.7 2.8E-17 9.7E-22 154.5 12.7 174 37-212 3-210 (215)
352 1q0x_L FAB 9B1, light chain; a 99.7 5.6E-17 1.9E-21 152.2 14.6 170 128-298 4-207 (212)
353 3omz_A Human vdelta1 gamma del 99.7 2.4E-17 8.4E-22 159.9 11.3 166 36-201 5-230 (259)
354 1wfo_A Sidekick 2; FN3, cell a 99.7 4.9E-17 1.7E-21 138.6 11.8 118 480-601 3-121 (130)
355 1dr9_A B7-1 (CD80), T lymphocy 99.7 5.5E-17 1.9E-21 150.8 13.2 165 134-302 3-197 (201)
356 3liz_H 4C3 monoclonal antibody 99.7 6.4E-17 2.2E-21 156.0 13.9 179 36-215 3-219 (253)
357 2xqy_G A13-D6.3 monoclonal ant 99.7 7.6E-17 2.6E-21 155.5 14.4 169 36-205 9-214 (261)
358 1hxm_B Gamma-delta T-cell rece 99.7 6.4E-17 2.2E-21 154.9 13.7 176 36-213 4-226 (242)
359 3uzq_A Anti-dengue MAB 4E11; d 99.7 6.5E-17 2.2E-21 156.3 13.7 184 128-311 4-249 (253)
360 4ei6_B Vbeta16 XV19 type II na 99.7 9E-17 3.1E-21 154.6 14.7 168 36-204 5-218 (245)
361 3q5y_A TCR N15 beta; IG, T cel 99.7 8.3E-17 2.8E-21 154.3 14.3 168 36-204 5-212 (240)
362 2ed9_A Netrin receptor DCC; tu 99.7 3.3E-17 1.1E-21 138.4 10.2 115 479-600 3-120 (124)
363 3shs_A HOC head outer capsid p 99.7 5.7E-15 1.9E-19 133.8 25.1 242 127-384 4-278 (304)
364 3knb_B Obscurin-like protein 1 99.7 1.3E-16 4.3E-21 129.5 13.0 96 30-126 10-107 (107)
365 1nqb_A Single-chain antibody f 99.7 1.5E-16 5E-21 153.7 15.6 176 130-306 5-233 (256)
366 4go6_B HCF C-terminal chain 1; 99.7 7.5E-18 2.6E-22 159.3 6.1 188 522-740 7-201 (232)
367 3pl6_D MBP peptide / T-cell re 99.7 6.6E-17 2.3E-21 157.8 13.0 170 34-204 27-240 (268)
368 3juy_B 3B3 single chain varian 99.7 2.3E-16 7.9E-21 152.7 16.7 170 125-294 6-244 (256)
369 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 9.1E-17 3.1E-21 151.9 13.3 168 132-300 7-217 (222)
370 3umt_A SCFV heavy chain and li 99.7 2.3E-16 7.9E-21 152.7 16.3 176 132-307 9-246 (256)
371 1c5d_H Monoclonal antibody aga 99.7 7.3E-17 2.5E-21 151.4 12.2 170 37-209 4-209 (215)
372 1c1e_H Catalytic antibody 1E9 99.7 8E-17 2.7E-21 152.0 12.4 170 130-300 5-214 (219)
373 1l6x_A Immunoglobulin gamma-1 99.7 2.3E-17 7.9E-22 153.8 8.5 171 33-204 2-196 (207)
374 3r06_A Anti-mouse CD3epsilon a 99.7 1.1E-16 3.7E-21 150.4 13.2 170 126-295 2-202 (213)
375 3esu_F Antibody 14B7* light ch 99.7 1.8E-16 6.3E-21 152.9 15.1 166 126-291 5-231 (250)
376 3auv_A SC-DSFV derived from th 99.7 1.2E-16 4.2E-21 156.4 13.9 168 125-292 12-235 (276)
377 3qib_D 2B4 beta chain; IG doma 99.7 4.1E-17 1.4E-21 159.4 10.4 194 94-295 3-244 (270)
378 1gsm_A Madcam-1, mucosal addre 99.7 1.3E-15 4.3E-20 138.4 19.3 153 135-295 17-194 (210)
379 3gkz_A Anti-methamphetamine si 99.7 5E-16 1.7E-20 150.5 17.8 177 130-306 13-249 (257)
380 2wbj_D OB TCR; transmembrane, 99.7 2.2E-16 7.4E-21 154.9 15.3 173 33-205 24-245 (279)
381 3bn9_D E2 FAB heavy chain; ant 99.7 6.4E-17 2.2E-21 155.3 11.2 169 36-206 3-220 (257)
382 1moe_A Anti-CEA MAB T84.66; an 99.7 1.2E-16 4.1E-21 153.2 13.0 165 127-291 3-219 (240)
383 3m8o_H Immunoglobulin A1 heavy 99.7 1.2E-16 4E-21 151.0 12.5 169 36-206 3-213 (221)
384 4dzb_B Vbeta2 (MAIT T cell rec 99.7 1.9E-16 6.5E-21 152.4 14.2 169 127-295 3-220 (246)
385 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 2.2E-16 7.7E-21 152.6 14.7 179 127-306 5-248 (256)
386 1hnf_A CD2; T lymphocyte adhes 99.7 6.5E-16 2.2E-20 139.2 16.3 155 133-302 7-177 (182)
387 3mtr_A N-CAM-1, NCAM-1, neural 99.7 5.3E-16 1.8E-20 145.8 16.0 182 215-402 16-211 (215)
388 3sob_L Antibody light chain; b 99.7 3E-16 1E-20 150.2 14.6 171 125-295 24-225 (237)
389 1mju_H Immunoglobulin MS6-12; 99.7 5.1E-16 1.7E-20 146.9 15.6 179 130-309 5-220 (227)
390 1nfd_E H57 FAB; complex (immun 99.7 2.3E-17 7.9E-22 154.8 6.0 164 132-295 6-201 (212)
391 1qok_A MFE-23 recombinant anti 99.7 8.4E-16 2.9E-20 150.9 16.7 177 129-306 30-268 (282)
392 2xzc_L FAB A.17 light chain; i 99.7 5.4E-16 1.8E-20 145.9 14.7 164 132-295 7-204 (216)
393 3qib_D 2B4 beta chain; IG doma 99.7 2.5E-16 8.6E-21 153.8 12.9 171 33-204 27-243 (270)
394 1svz_A Immunoglobulin;, single 99.7 5.6E-16 1.9E-20 149.2 15.0 166 127-292 3-228 (247)
395 3omz_A Human vdelta1 gamma del 99.7 4.6E-16 1.6E-20 150.9 14.4 167 125-291 2-230 (259)
396 1ccz_A Protein (CD58); LFA-3, 99.7 3.4E-16 1.2E-20 140.2 12.3 151 134-302 4-167 (171)
397 2znx_A SCFV; fluorotryptohpan, 99.7 7.2E-16 2.5E-20 147.7 15.3 166 127-292 3-222 (242)
398 2dru_A Chimera of CD48 antigen 99.7 1.9E-15 6.5E-20 136.6 17.0 154 133-301 7-176 (180)
399 2vol_A Murine IGG FC; FC, zinc 99.7 1.6E-16 5.3E-21 148.1 10.0 164 130-294 7-196 (207)
400 3lb6_C IL-13, interleukin-13 r 99.7 3E-15 1E-19 152.5 20.3 273 312-605 33-334 (380)
401 3bkj_L WO2 IGG2A FAB fragment 99.7 3.5E-16 1.2E-20 151.0 12.8 171 125-295 34-240 (252)
402 3fku_X Neutralizing antibody F 99.7 2.9E-16 1E-20 153.8 12.3 164 39-203 6-234 (280)
403 1pz5_B Heavy chain of FAB (SYA 99.7 3.4E-16 1.2E-20 147.7 12.3 167 131-300 6-215 (220)
404 2rgs_A I, IG gamma-2B heavy ch 99.7 8.3E-17 2.8E-21 151.3 7.4 172 124-295 8-205 (218)
405 3ux9_B SCFV antibody; five hel 99.7 7.9E-16 2.7E-20 149.0 14.5 163 131-293 8-236 (256)
406 3lqm_A Interleukin-10 receptor 99.7 2.3E-15 8E-20 138.3 16.5 179 506-742 4-197 (201)
407 2fbj_H IGA-kappa J539 FAB (hea 99.7 2.9E-15 9.8E-20 141.0 17.3 165 132-297 7-212 (220)
408 2dbj_A Proto-oncogene tyrosine 99.6 7.7E-16 2.6E-20 129.5 11.7 111 487-601 1-115 (124)
409 1dee_B IGM RF 2A2; FAB-IBP com 99.6 2.5E-15 8.4E-20 141.8 16.5 166 132-299 7-220 (223)
410 1bec_A 14.3.D T cell antigen r 99.6 6E-16 2.1E-20 147.8 12.2 166 37-203 3-210 (238)
411 1x5h_A Neogenin; RGM binding, 99.6 4.8E-16 1.6E-20 132.9 10.3 126 487-617 1-129 (132)
412 1wfn_A Sidekick 2; FN3, cell a 99.6 9.1E-16 3.1E-20 128.3 11.7 106 487-597 1-106 (119)
413 2gjj_A A21 single-chain antibo 99.6 1.4E-15 4.9E-20 147.4 14.1 167 126-292 6-239 (264)
414 3d9a_H Heavy chain of hyhel10 99.6 6.4E-16 2.2E-20 144.6 11.3 165 132-298 7-206 (210)
415 1axi_B HGHBP, growth hormone r 99.6 2.9E-15 9.9E-20 141.4 15.7 190 502-740 28-235 (236)
416 1x3d_A Fibronectin type-III do 99.6 6.8E-16 2.3E-20 128.8 10.0 109 487-601 1-109 (118)
417 1x5i_A Neogenin; RGM binding, 99.6 8.2E-16 2.8E-20 129.4 10.4 105 484-596 2-112 (126)
418 2j6e_L IGM, FAB light chain; a 99.6 1.5E-16 5.3E-21 151.8 6.6 167 132-298 26-227 (234)
419 3bqu_C 3H6 FAB light chain; be 99.6 2E-16 6.7E-21 150.9 7.3 170 125-294 23-223 (233)
420 2dlh_A Receptor-type tyrosine- 99.6 9.1E-16 3.1E-20 129.0 10.5 111 487-601 1-112 (121)
421 4ei6_B Vbeta16 XV19 type II na 99.6 2.8E-15 9.5E-20 144.1 14.9 169 126-295 3-219 (245)
422 3bae_H WO2 IGG2A FAB fragment 99.6 2.2E-15 7.7E-20 142.7 14.1 167 132-299 7-219 (228)
423 2edx_A Protein tyrosine phosph 99.6 3.8E-15 1.3E-19 127.7 14.0 112 487-601 1-115 (134)
424 2gki_A Nuclease; anti-DNA anti 99.6 4.7E-15 1.6E-19 146.1 16.6 178 131-308 28-274 (291)
425 1op3_H FAB 2G12, heavy chain; 99.6 1.5E-15 5.2E-20 143.5 12.6 163 132-296 7-215 (225)
426 3eow_R Poliovirus receptor; im 99.6 2.6E-16 8.9E-21 148.7 7.2 169 132-302 6-208 (221)
427 3pl6_D MBP peptide / T-cell re 99.6 1.7E-15 6E-20 147.7 13.3 170 125-295 26-241 (268)
428 3knb_A Titin; IG-like, titin, 99.6 4.1E-15 1.4E-19 119.1 12.8 91 33-124 5-99 (100)
429 3to4_D NKT vbeta2 (mouse varia 99.6 1.4E-15 4.9E-20 146.7 12.1 167 37-203 5-217 (253)
430 4acp_A IG gamma-1 chain C regi 99.6 3.9E-16 1.3E-20 147.7 7.7 174 30-203 20-216 (240)
431 3q5y_A TCR N15 beta; IG, T cel 99.6 6.2E-15 2.1E-19 141.1 16.2 168 127-295 4-213 (240)
432 2ee2_A Contactin-1; neural cel 99.6 3.8E-15 1.3E-19 124.4 12.7 110 487-602 1-111 (119)
433 2crm_A Fibronectin type-III do 99.6 2.5E-15 8.6E-20 125.7 11.6 107 487-600 1-110 (120)
434 1oga_E TRBC1, T-cell receptor 99.6 3.8E-15 1.3E-19 143.5 14.5 169 36-205 6-218 (252)
435 1ypz_F T-cell receptor gamma c 99.6 1.9E-15 6.5E-20 143.2 11.9 166 38-205 6-216 (230)
436 3o3u_N Maltose-binding peripla 99.6 2.8E-15 9.5E-20 164.3 14.9 165 39-204 372-565 (581)
437 2aty_A Complement receptor chi 99.6 2.5E-15 8.7E-20 153.6 13.5 172 33-204 167-361 (376)
438 3tv3_H PGT128 heavy chain, IG 99.6 1.7E-15 5.8E-20 144.5 11.2 178 36-214 3-235 (239)
439 3nfj_J T cell receptor beta ch 99.6 4.4E-15 1.5E-19 142.7 14.0 168 128-295 4-219 (245)
440 3knb_B Obscurin-like protein 1 99.6 5.9E-15 2E-19 119.7 12.3 93 124-216 12-105 (107)
441 3liz_H 4C3 monoclonal antibody 99.6 5.8E-15 2E-19 142.3 14.4 171 132-305 7-219 (253)
442 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 3.5E-15 1.2E-19 145.4 12.7 169 124-292 14-254 (268)
443 1x5f_A Neogenin; RGM binding, 99.6 4.6E-15 1.6E-19 124.3 11.7 110 487-601 1-111 (120)
444 2djs_A Ephrin type-B receptor 99.6 4.9E-15 1.7E-19 121.3 11.6 98 498-601 2-99 (108)
445 3lqm_A Interleukin-10 receptor 99.6 1.1E-14 3.9E-19 133.7 15.2 177 403-600 3-192 (201)
446 1v5j_A KIAA1355 protein, RSGI 99.6 1.3E-15 4.6E-20 121.9 7.8 95 502-602 6-100 (108)
447 4acp_A IG gamma-1 chain C regi 99.6 7.7E-16 2.6E-20 145.6 7.5 191 100-293 1-216 (240)
448 2e7h_A Ephrin type-B receptor 99.6 6.4E-15 2.2E-19 120.7 12.0 98 498-600 2-99 (109)
449 3fku_X Neutralizing antibody F 99.6 5.3E-15 1.8E-19 144.8 13.4 161 132-293 7-234 (280)
450 1l6x_A Immunoglobulin gamma-1 99.6 1.5E-15 5.1E-20 141.5 8.9 169 126-294 2-196 (207)
451 3m8o_H Immunoglobulin A1 heavy 99.6 1.9E-14 6.6E-19 135.6 16.6 162 131-296 6-213 (221)
452 3n9g_H FAB fragment of MAB CR4 99.6 1.2E-14 4.1E-19 137.8 15.2 176 37-215 4-224 (230)
453 3qhz_H Human monoclonal antibo 99.6 1.7E-15 5.9E-20 144.0 9.0 177 37-214 4-227 (232)
454 1dn0_B IGM-kappa cold agglutin 99.6 1.6E-14 5.5E-19 137.0 15.6 171 132-304 7-225 (232)
455 1va9_A DOWN syndrome cell adhe 99.6 1.1E-14 3.6E-19 122.6 12.8 108 492-600 3-113 (122)
456 3u2s_H PG9 heavy chain; greek 99.6 1.1E-14 3.6E-19 139.4 14.3 177 37-214 3-236 (248)
457 1wj3_A KIAA1496 protein; beta 99.6 6.9E-15 2.4E-19 121.5 11.3 105 487-601 1-108 (117)
458 3knb_A Titin; IG-like, titin, 99.6 1.2E-14 4.1E-19 116.3 12.2 92 125-216 5-99 (100)
459 1i1c_A IGG2A, IG gamma-2A chai 99.6 1.7E-15 5.8E-20 143.9 8.4 163 132-294 23-210 (239)
460 3v6o_A Leptin receptor; recept 99.6 5.6E-14 1.9E-18 129.9 18.3 186 403-598 2-200 (206)
461 1axi_B HGHBP, growth hormone r 99.6 1.3E-14 4.5E-19 136.8 13.9 185 399-598 27-230 (236)
462 1x5z_A Receptor-type tyrosine- 99.6 5.8E-15 2E-19 122.6 10.0 107 487-602 1-107 (115)
463 2w59_A IGY FCU3-4; immunoglobu 99.6 1.4E-15 4.9E-20 144.1 7.0 170 125-295 12-217 (231)
464 1x5g_A Neogenin; RGM binding, 99.6 1.6E-14 5.3E-19 120.2 12.3 104 489-600 1-106 (116)
465 2yrz_A Integrin beta-4; GP150, 99.6 5.9E-15 2E-19 123.1 9.4 104 487-596 1-104 (118)
466 1x4z_A Biregional cell adhesio 99.6 1.7E-14 5.8E-19 120.8 12.1 108 487-598 1-109 (121)
467 2wbj_D OB TCR; transmembrane, 99.6 2E-14 6.7E-19 140.9 14.6 170 126-295 25-245 (279)
468 2ed7_A Netrin receptor DCC; tu 99.6 1.7E-14 5.9E-19 120.6 11.9 102 495-601 9-110 (119)
469 2xqy_G A13-D6.3 monoclonal ant 99.6 2.3E-14 7.9E-19 138.1 14.5 166 130-296 11-215 (261)
470 3d85_D IL-12B, interleukin-12 99.6 5.6E-13 1.9E-17 130.8 24.3 244 229-496 17-302 (306)
471 2edb_A Netrin receptor DCC; tu 99.6 1.9E-14 6.5E-19 118.9 11.5 92 496-595 9-101 (116)
472 1wis_A KIAA1514 protein; FNIII 99.6 9E-15 3.1E-19 122.9 9.6 108 487-597 1-111 (124)
473 1hxm_B Gamma-delta T-cell rece 99.6 2.5E-14 8.6E-19 136.8 13.7 169 127-297 3-220 (242)
474 1ow0_A IG alpha-1 chain C regi 99.6 3.4E-16 1.2E-20 146.6 0.5 171 32-204 3-199 (214)
475 1x4x_A Fibronectin type-III do 99.6 1.8E-14 6E-19 117.2 10.6 96 498-601 2-97 (106)
476 1x5l_A Ephrin type-A receptor 99.6 1.3E-14 4.5E-19 119.5 9.7 100 496-601 3-102 (111)
477 2cqv_A MLCK, myosin light chai 99.6 4.7E-14 1.6E-18 116.8 13.1 99 31-130 5-105 (114)
478 3iu4_H CHP3 FAB heavy chain; a 99.6 1.5E-14 5.2E-19 139.6 11.5 174 37-213 4-221 (263)
479 2ed9_A Netrin receptor DCC; tu 99.5 1E-14 3.5E-19 123.0 8.8 117 581-741 3-124 (124)
480 1g1c_A Immunoglobulin-like dom 99.5 8.2E-14 2.8E-18 112.1 13.5 92 32-124 4-98 (99)
481 2haz_A N-CAM 1, neural cell ad 99.5 1.5E-14 5.1E-19 117.4 8.9 97 500-600 3-101 (105)
482 1ypz_E T cell receptor delta, 99.5 4.3E-14 1.5E-18 131.1 13.0 164 37-205 5-198 (207)
483 1iam_A ICAM-1, CD54, intercell 99.5 1.9E-13 6.6E-18 121.1 16.4 157 37-204 3-166 (185)
484 3nl4_H Antigen binding fragmen 99.5 4.2E-14 1.4E-18 132.7 13.1 171 224-396 5-210 (215)
485 1c5d_H Monoclonal antibody aga 99.5 3.9E-14 1.3E-18 132.7 12.4 166 132-298 7-208 (215)
486 2ede_A Netrin receptor DCC; tu 99.5 7.2E-14 2.5E-18 115.7 12.6 100 499-601 3-105 (114)
487 3bn9_D E2 FAB heavy chain; ant 99.5 1.8E-14 6E-19 138.2 10.1 164 132-296 7-220 (257)
488 3to4_D NKT vbeta2 (mouse varia 99.5 2.8E-14 9.6E-19 137.6 11.3 165 129-293 5-217 (253)
489 1wit_A Twitchin 18TH IGSF modu 99.5 3.6E-14 1.2E-18 112.5 10.0 88 34-122 3-92 (93)
490 3mlr_H Human monoclonal anti-H 99.5 6.2E-14 2.1E-18 132.3 13.4 170 37-209 4-219 (226)
491 3irg_B Obscurin-like protein 1 99.5 1.1E-13 3.8E-18 113.2 13.1 94 32-126 12-107 (107)
492 2dn7_A Receptor-type tyrosine- 99.5 5.1E-14 1.7E-18 115.1 10.9 93 498-597 2-94 (107)
493 3sob_H Antibody heavy chain, l 99.5 1.4E-13 4.7E-18 132.9 15.4 176 36-214 26-249 (256)
494 2edj_A Roundabout homolog 2; K 99.5 4.9E-14 1.7E-18 113.6 10.2 94 31-126 6-100 (100)
495 2ed8_A Netrin receptor DCC; tu 99.5 6.2E-14 2.1E-18 114.2 10.8 94 500-601 4-97 (106)
496 2gys_A Cytokine receptor commo 99.5 9.4E-13 3.2E-17 137.0 22.5 221 404-644 5-257 (419)
497 2yuz_A Myosin-binding protein 99.5 2.9E-14 1E-18 114.0 8.6 92 31-127 5-98 (100)
498 3n1f_C Cell adhesion molecule- 99.5 7.1E-14 2.4E-18 112.1 10.6 93 505-600 6-100 (102)
499 3qp3_A Titin; I-SET IG-like, s 99.5 2.1E-13 7.1E-18 110.6 13.4 92 33-125 8-101 (103)
500 2dm4_A Sortilin-related recept 99.5 1E-13 3.5E-18 113.3 11.3 94 500-601 4-99 (108)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=6.1e-48 Score=421.63 Aligned_cols=451 Identities=22% Similarity=0.364 Sum_probs=353.0
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEec--cCCcEEEEccCCCCCCEEEEEEEEeC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
.|+.|+..+++..+.+|++++|.|.+.|.|.+.|+|+|||..|....++.+. ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (570)
T 3b43_A 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENS 83 (570)
T ss_dssp CCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeC
Confidence 3566778889999999999999999999999999999999999877666543 33468999999999999999999999
Q ss_pred CeeeEEEEEEEEEE---ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce-eecCceEEEc
Q psy11701 110 VGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-KVGPNRITIE 185 (745)
Q Consensus 110 ~g~~~~~~~~l~V~---~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~-~~~~~~L~i~ 185 (745)
.|... ....|.|. .+|.|...+.+..+.+|+++.|.|.+.|.|.+.++|+|||..+......... ......|.|.
T Consensus 84 ~g~~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~ 162 (570)
T 3b43_A 84 VGAVA-SSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQIL 162 (570)
T ss_dssp TEEEE-EEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEES
T ss_pred CceEE-EEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEEC
Confidence 98876 44556664 3677777788888899999999999999999999999999988743321111 1234689999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-c
Q psy11701 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-G 262 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~ 262 (745)
++..+|+|.|+|.|.|..|.....+.+.|.. .+|.+...|....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .
T Consensus 163 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~ 242 (570)
T 3b43_A 163 QTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGG 242 (570)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTS
T ss_pred cCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCC
Confidence 9999999999999999999888777777653 477888888888889999999999999999999999999998753 3
Q ss_pred eEEEe---ecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCC-cEEEecCCeEEEEEEEEecCCCC
Q psy11701 263 RYTIL---ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-DYEVEAGQSATFRCNAVSDPSLK 338 (745)
Q Consensus 263 ~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~-~~~~~~g~~~~l~C~~~~~~~~~ 338 (745)
++... ..+.|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|.+...+. ...+..|+.+.|.|.+.+.|.
T Consensus 243 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~-- 320 (570)
T 3b43_A 243 NYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPE-- 320 (570)
T ss_dssp SEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSS--
T ss_pred cEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCC--
Confidence 43332 234799999999999999999999999999999999998887665543 345688999999999999876
Q ss_pred cEEEEeeCCeeccCCCCCeEEE-cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCC---CCCCceeEEee
Q psy11701 339 LSIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVI 414 (745)
Q Consensus 339 ~~i~W~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~---~P~~~~~~~~~ 414 (745)
+.+.|++++..+......+... .....|.|.++...|.|.|+|.|.|..|.....+.|.|..||. .|..+.+ .
T Consensus 321 p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~---~ 397 (570)
T 3b43_A 321 IKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVET---L 397 (570)
T ss_dssp CEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEE---C
T ss_pred CEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceee---c
Confidence 7899999999887443333322 3346799999999999999999999999999999999987763 3433332 5
Q ss_pred cCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCC---CceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCC
Q psy11701 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE---GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491 (745)
Q Consensus 415 ~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~ 491 (745)
.+..+.|.|.....+. ..+ .|.+++.. .....+.. ......+.|.++...+...|.|.|.|..|....
T Consensus 398 ~G~~v~l~C~~~g~P~-------p~v-~W~k~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~ 468 (570)
T 3b43_A 398 KGADVHLECELQGTPP-------FQV-SWHKDKRELRSGKKYKIMS-ENFLTSIHILNVDSADIGEYQCKASNDVGSDTC 468 (570)
T ss_dssp TTCCEEEEEEEESSSS-------CCC-EEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCEEEEEEEEecCCC-------CEE-EEEECCEECcCCCCEEEEE-cCCEEEEEECCCChhhCEEEEEEEEECCCeEEE
Confidence 6778899998742221 112 23332211 11112222 334467889999999999999999999997654
Q ss_pred CcceEE
Q psy11701 492 SEIISF 497 (745)
Q Consensus 492 S~~~~~ 497 (745)
+..+.+
T Consensus 469 ~~~l~v 474 (570)
T 3b43_A 469 VGSITL 474 (570)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 433333
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=9e-47 Score=412.39 Aligned_cols=446 Identities=21% Similarity=0.352 Sum_probs=350.1
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEe--ccCCcEEEEccCCCCCCEEEEEEEEeC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--GNYGKSLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
.|+.+...+.+..+.+|++++|.|.+.|.|.++|.|+|||+.|....++.. ......|.|.+++.+|+|.|+|.|.|.
T Consensus 100 ~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 179 (570)
T 3b43_A 100 LPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNP 179 (570)
T ss_dssp CCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeC
Confidence 355666777888899999999999999999999999999999987666542 334468999999999999999999999
Q ss_pred CeeeEEEEEEEEEE---ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee-cCceEEEc
Q psy11701 110 VGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV-GPNRITIE 185 (745)
Q Consensus 110 ~g~~~~~~~~l~V~---~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~-~~~~L~i~ 185 (745)
.|... ....|.|. .+|.+...|....+.+|+++.|.|.+.|.|.+.++|+|+|..+........... ....|.|.
T Consensus 180 ~g~~~-~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~ 258 (570)
T 3b43_A 180 LGTAS-SSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVL 258 (570)
T ss_dssp TEEEE-EEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEES
T ss_pred CcEEE-EEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEc
Confidence 88765 45666664 467888888888899999999999999999999999999999864322111112 23689999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCC-ceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc-e
Q psy11701 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK-DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-R 263 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~-~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~ 263 (745)
++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+... +
T Consensus 259 ~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~ 337 (570)
T 3b43_A 259 KVTKGDAGQYTCYASNVAGKDSCSAQLGVQE-PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSK 337 (570)
T ss_dssp SBCGGGCEEEEEEEEETTEEEEEEEEECCBC-CCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSS
T ss_pred ccCcccCEEEEEEEECCCCcEEEEEEEEeec-CCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCc
Confidence 9999999999999999999998889998875 666665543 345789999999999999999999999999987543 3
Q ss_pred EEEe---ecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcE
Q psy11701 264 YTIL---ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340 (745)
Q Consensus 264 ~~~~---~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~ 340 (745)
+... ..+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...|....+..|+.+.|.|.+.+.|. +.
T Consensus 338 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~ 415 (570)
T 3b43_A 338 FRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPP--FQ 415 (570)
T ss_dssp EEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSS--CC
T ss_pred EEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCC--CE
Confidence 3322 224699999999999999999999999999999999999999988888888899999999999999886 67
Q ss_pred EEEeeCCeeccCCCCCeEEEc-CCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCC---CCCceeEEeecC
Q psy11701 341 IVWLRGSEPIDFESEPRFVQS-NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLIQVIDA 416 (745)
Q Consensus 341 i~W~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~---P~~~~~~~~~~~ 416 (745)
+.|++++..+.......+... ....|.|.++...|.|.|+|.|.|..|.....+.|.+..||.. |.++.+ ..+
T Consensus 416 v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~---~~g 492 (570)
T 3b43_A 416 VSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDIST---VVG 492 (570)
T ss_dssp CEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCC---BTT
T ss_pred EEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCcee---cCC
Confidence 999999998864333222222 2257999999999999999999999999998899988876542 223222 456
Q ss_pred ceeEEEEEeCCCCCcceeeeeEEEEEEeccCCC----CceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCC
Q psy11701 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE----GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492 (745)
Q Consensus 417 ~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S 492 (745)
..+.|.|....... -.| .|.++++. .....+.. ..+...+.|..+.+.+...|.|.|.|..|....+
T Consensus 493 ~~~~l~c~~~g~p~-------~~v-~W~k~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 563 (570)
T 3b43_A 493 EEVQLQATIEGAEP-------ISV-AWFKDKGEIVRESDNIWISY-SENIATLQFSRAEPANAGKYTCQIKNEAGTQECF 563 (570)
T ss_dssp CCEEEEEEEESCSS-------CCC-EEEETTEECCCCTTTEEECC-CSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEE
T ss_pred CeEEEEEEEecCCC-------CEE-EEEeCCeEeccCCCeEEEEE-CCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEE
Confidence 77888887632211 112 23332211 11111222 3455688899999999999999999999976544
Q ss_pred c
Q psy11701 493 E 493 (745)
Q Consensus 493 ~ 493 (745)
.
T Consensus 564 a 564 (570)
T 3b43_A 564 A 564 (570)
T ss_dssp E
T ss_pred E
Confidence 3
No 3
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-47 Score=429.17 Aligned_cols=575 Identities=15% Similarity=0.214 Sum_probs=323.7
Q ss_pred CCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccC-CCCCCEEEEEEEEeCCceEEEEEEEEEee--
Q psy11701 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL-RKSDTGNYGCNATNSLGYVYKDVYVNVLA-- 216 (745)
Q Consensus 140 G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~-- 216 (745)
+.++.|.|.+.|.|.+.+.|.|+|..+... ....+.|..+ ..+..+.|+|.+.+..|..... .+.+..
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~--------~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~ 161 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTW--------NRAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHP 161 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSC--------EEEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSC
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCce--------eEEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeecc
Confidence 468999999999999999999999876421 1234556554 2333478999877777764432 222222
Q ss_pred --cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEE-Ee--eCCEEccCceEEEee----cCcEEEcccCCCCCEEEEE
Q psy11701 217 --HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN-WI--HNQKELTGGRYTILE----TGDLKITDVAFADSGEYTC 287 (745)
Q Consensus 217 --~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~-W~--~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 287 (745)
.+|.+. .+....+.+|++++|.|.+.|.|.+.+. |+ +++..+......... .+.|.|.++...|.|.|+|
T Consensus 162 ~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c 240 (731)
T 2v5y_A 162 CTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRC 240 (731)
T ss_dssp CSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEE
T ss_pred cccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEE
Confidence 356666 5667889999999999999999998887 88 677665433322221 2579999999999999999
Q ss_pred EEEeCCce-EEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEe----cCCCCcEEEEeeCCeeccCCCCCeEEEcC
Q psy11701 288 FARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS----DPSLKLSIVWLRGSEPIDFESEPRFVQSN 362 (745)
Q Consensus 288 ~~~n~~g~-~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~----~~~~~~~i~W~~~~~~~~~~~~~~~~~~~ 362 (745)
.|.|..|. .+..+.|.|..+|.++..|....+ ....+.|.|.... .+...+.+.|...+.. ........
T Consensus 241 ~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~-~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~-----~~~~~~~~ 314 (731)
T 2v5y_A 241 MIRTEGGVGISNYAELVVKEPPVPIAPPQLASV-GATYLWIQLNANSINGDGPIVAREVEYCTASGS-----WNDRQPVD 314 (731)
T ss_dssp EEEETTEEEECCCEEEEEECCCCBSSCCEEEEE-CSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS-----CEEEEECC
T ss_pred EEECCCCCcceeeEEEEEecCCCCCCCcceecc-CCceEEEEeCCcccCCCCccEEEEEEEEECCCC-----ceEEeccC
Confidence 99999998 667788999888876666654443 4578889987643 2233357788765321 11223334
Q ss_pred CeEEEEecCCCCCCEEEEEEEE--eCCceEEEEEEEEEe----ccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeee
Q psy11701 363 DYSLTVTKSSELDSGQYTCRAQ--TELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436 (745)
Q Consensus 363 ~~~l~i~~~~~~~~g~y~c~a~--n~~g~~~~~~~l~v~----~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~ 436 (745)
...+.|.++...+.|.|+|.|. |..|.+..+..+.+. .|+.+|.++.+.. .+.+++.|+|+++.....++.+.
T Consensus 315 ~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~-~~~~sv~l~W~~p~~~~~~~~~~ 393 (731)
T 2v5y_A 315 STSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVE-VKSRQITIRWEPFGYNVTRCHSY 393 (731)
T ss_dssp SSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEE-ECSSCEEEEEECCCHHHHCSSSC
T ss_pred cceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEe-ccCCeEEEEEECCCcccccceee
Confidence 5689999999999999999999 999976644334443 4567888888877 88999999999965444456788
Q ss_pred eEEEEEEeccCCCCcee-E--EEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCC--cee
Q psy11701 437 GYKVQTWTEKDGEGSIR-E--LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ--SLE 511 (745)
Q Consensus 437 ~y~i~~~~~~~~~~~~~-~--~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~--~~~ 511 (745)
+|.|+|+.......... . +.. ......++|.+|.|++.|.|+|.|.|..|.|+ |..+.++|.+++|++|+ .+.
T Consensus 394 ~y~v~y~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~ 471 (731)
T 2v5y_A 394 NLTVHYCYQVGGQEQVREEVSWDT-ENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQ 471 (731)
T ss_dssp EEEEEEEEESSSSEEEEEEEECCS-SCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCE
T ss_pred eEEEEEEEccCCCCccceeEEEEe-cCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEE
Confidence 99999987764322211 1 122 45678899999999999999999999999985 88899999999998775 444
Q ss_pred EEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccC----CcccccccccCCCcceeeecCCCCCccEEEEEEEEec
Q psy11701 512 AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG----PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587 (745)
Q Consensus 512 ~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~ 587 (745)
... ..++|.|+|++|...+|.|.+|.|+|+..+..... .... .. ......++++|.+|.|++.|.|+|.|+|.
T Consensus 472 ~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 548 (731)
T 2v5y_A 472 GST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSG-RV-SKLGNETHFLFFGLYPGTTYSFTIRASTA 548 (731)
T ss_dssp EEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCCEE-EE-EEETTCCEEEECSCCTTEEEEEEEEEEET
T ss_pred eee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCcce-EE-eecCCcceEEecCCCCCCEEEEEEEEEeC
Confidence 443 47899999999988889999999999876532110 0000 00 11456689999999999999999999999
Q ss_pred CCCCCCcceeeecccCCCCCCC-----CCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccce
Q psy11701 588 AGDGAESKYLFYVPFKNPDNVE-----GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662 (745)
Q Consensus 588 ~G~g~~S~~~~~~~~~~~~~~~-----~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~ 662 (745)
.|.|++|..........+.... ......+++.|+|.++ ...+|+|.+|.|.|+............... ...
T Consensus 549 ~G~g~~s~~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp--~~~~g~I~~Y~v~~~~~~~~~~~~~~~~~~--~~~ 624 (731)
T 2v5y_A 549 KGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPA--HSRGAPVSVYQIVVEEERPRRTKKTTEILK--CYP 624 (731)
T ss_dssp TEEEEEEEEEEECCCCCCCC------------------------------------------------------------
T ss_pred CccCCCcccEEEcCCCCCCCCCcccccccccCCceEEEEEeCC--CCCCCceEEEEEEEEecCCCCCcccccccc--Ccc
Confidence 9999998643322222222111 1123567899999865 567889999999998654321100000000 000
Q ss_pred EEeccCC-CcceEEEEEEEEeeeecCCCCeEEEEEec-CCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeCCC
Q psy11701 663 LVLANQP-TFQPYEIKVVQTWTEKDGEGSIRELIVNK-GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740 (745)
Q Consensus 663 ~~~~~l~-~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~ 740 (745)
..+.... ....+...+.|......... ...+.+.+ .....|.+..|+|++.|.|+|+|++.+|.|..++.+.+.|+.
T Consensus 625 ~~~~~~~~~~~~~~~y~aa~~~p~~~~~-~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~~~~~v~~~t~~ 703 (731)
T 2v5y_A 625 VPIHFQNASLLNSQYYFAAEFPADSLQA-AQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKG 703 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCHHHHhhcCCcceEEEEcChhhCcc-cCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCcEeeeEEEeccc
Confidence 0000000 00000000001000000000 00111111 122345667899999999999999999999999999999984
Q ss_pred C
Q psy11701 741 G 741 (745)
Q Consensus 741 ~ 741 (745)
+
T Consensus 704 ~ 704 (731)
T 2v5y_A 704 A 704 (731)
T ss_dssp -
T ss_pred c
Confidence 4
No 4
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=3.2e-41 Score=375.60 Aligned_cols=503 Identities=20% Similarity=0.243 Sum_probs=363.2
Q ss_pred ccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEE
Q psy11701 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID 119 (745)
Q Consensus 40 ~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~ 119 (745)
+....+.+|+.++|.|.+.+ |.+.+.|+|+|..|....++.+...+..|.|.+++.+|+|.|+|.|.+..|...+..+.
T Consensus 118 ~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~ 196 (642)
T 1e07_A 118 NNSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVI 196 (642)
T ss_pred cCceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEE
Confidence 44567899999999999998 88899999999999888888877777899999999999999999999988876667788
Q ss_pred EEEEecCe-EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEE
Q psy11701 120 LSVLAAPY-FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198 (745)
Q Consensus 120 l~V~~~p~-~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 198 (745)
|.|..+|. +...|....+.+|+.+.|.|.+.+.|.+.++|+++|..+.. ...|.|.+++.+|+|.|+|.
T Consensus 197 l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~----------~~~L~i~~~~~~d~G~Y~C~ 266 (642)
T 1e07_A 197 LNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS----------TQELFIPNITVNNSGSYTCQ 266 (642)
T ss_pred EEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEccc----------CCceEEecccccCCeEEEEE
Confidence 99886553 45567777889999999999999999999999999988742 35799999999999999999
Q ss_pred EEeCCceEEE--EEEEEEeecC--CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEEe-ecCcE
Q psy11701 199 ATNSLGYVYK--DVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTIL-ETGDL 272 (745)
Q Consensus 199 ~~~~~g~~~~--~~~l~v~~~~--p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~-~~~~l 272 (745)
|.|..|.... .+.|.|...+ |.+. .+....+..|+.+.|.|.+.+.| +.+.|++++..+.. .++... ..+.|
T Consensus 267 a~n~~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L 344 (642)
T 1e07_A 267 AHNSDTGLNRTTVTTITVYAEPPKPFIT-SNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTL 344 (642)
T ss_pred EEeCCCceEEeeeEEEEEEccCCCCEEE-cCCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEE
Confidence 9998876544 3556665432 3333 33344566688899999998876 68999999988753 344332 34689
Q ss_pred EEcccCCCCCEEEEEEEEeCCceE-EEEEEEEEeeccee-ecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeec
Q psy11701 273 KITDVAFADSGEYTCFARNKLGTA-QGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350 (745)
Q Consensus 273 ~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~~p~~-~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~ 350 (745)
.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|.. ...|....+..|+.+.|.|.+.+.|. +.+.|++++..+
T Consensus 345 ~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~i~W~~~g~~~ 422 (642)
T 1e07_A 345 TLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPP--AQYSWLIDGNIQ 422 (642)
T ss_pred EEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCC--CeEEEEECCEEc
Confidence 999999999999999999998864 45678888766643 34456677889999999999998876 689999999876
Q ss_pred cCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEE--EEEEEeccCCCCCCc--eeEEeecCceeEEEEEeC
Q psy11701 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ--ATLTVQVPLEAPSNF--TLIQVIDAKKAVVSWNPV 426 (745)
Q Consensus 351 ~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~--~~l~v~~pp~~P~~~--~~~~~~~~~~v~l~W~~~ 426 (745)
. ....|.|..+...|.|.|+|.|.|..|....+ ..+.+..++.+|... ....+..+..+.|.|...
T Consensus 423 ~----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~ 492 (642)
T 1e07_A 423 Q----------HTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPE 492 (642)
T ss_pred C----------CCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECC
Confidence 4 23468999999999999999999999876554 445555444444211 011124677899999874
Q ss_pred CCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCC-CcceEEeCCCCCCC
Q psy11701 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP-SEIISFVTPEGVPG 505 (745)
Q Consensus 427 ~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~-S~~~~~~t~~~~P~ 505 (745)
.+ ...+.|+..+........+.+ ..+...+.|.++...+.+.|+|.|.|..|.... +..+.+...+..+.
T Consensus 493 ~~--------~~~i~W~~~g~~l~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~ 563 (642)
T 1e07_A 493 AQ--------NTTYLWWVNGQSLPVSPRLQL-SNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPI 563 (642)
T ss_pred CC--------CcEEEEEECCEeCCCCCcEEE-cCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcce
Confidence 21 123433333222112222333 334568899999999999999999999986533 23444442221111
Q ss_pred -CCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEE
Q psy11701 506 -TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584 (745)
Q Consensus 506 -~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a 584 (745)
.|.+..+ .....+.|.......+. . .|.|...+.. + . ....+.|.++.+...-.++..|
T Consensus 564 ~~~~~~~v--~~g~~~~l~C~~~g~p~--p---~v~W~~~g~~-----------i-~-~~~~L~i~~~~~~d~G~Y~C~a 623 (642)
T 1e07_A 564 ISPPDSSY--LSGANLNLSCHSASNPS--P---QYSWRINGIP-----------Q-Q-HTQVLFIAKITPNNNGTYACFV 623 (642)
T ss_pred ecCCceeE--EcCCcEEEEEEeccCCC--C---eEEEEECCEE-----------C-c-cCceEEECcccccCCeEEEEEE
Confidence 2223222 23445666655422111 1 4666553321 1 1 1246778888888888899999
Q ss_pred EecCCCCCCcce
Q psy11701 585 YTKAGDGAESKY 596 (745)
Q Consensus 585 ~n~~G~g~~S~~ 596 (745)
.|..|....+..
T Consensus 624 ~N~~G~~~~s~~ 635 (642)
T 1e07_A 624 SNLATGRNNSIV 635 (642)
T ss_pred EecccCcceeEE
Confidence 999998765543
No 5
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=6.7e-42 Score=356.89 Aligned_cols=365 Identities=23% Similarity=0.334 Sum_probs=297.4
Q ss_pred CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeC--CEEcc------CceEEEee---cCcEEEcccCCCCCEEEEE
Q psy11701 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELT------GGRYTILE---TGDLKITDVAFADSGEYTC 287 (745)
Q Consensus 219 p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~------~~~~~~~~---~~~l~i~~~~~~d~G~Y~C 287 (745)
|.|.. +....+.+|++++|.|.+.+.|.+.+.|+++ +..+. ..++.+.. .+.|.|.+++.+|+|.|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 55555 5567788899999999999999999999999 77764 34555542 3579999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEc---CCe
Q psy11701 288 FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS---NDY 364 (745)
Q Consensus 288 ~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~~ 364 (745)
.|.|..|..+..+.|.|..+|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+......++... ...
T Consensus 81 ~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 158 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPP--ASIHWRRDKLVLPAKNTTNLKTYSTGRKM 158 (389)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESC--CEEEEEETTEESSCTTCTTEEEEECSSCE
T ss_pred EEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCC--CeEEEEECCccCCcccCceEEEeccCCEE
Confidence 9999999999999999999998877777667889999999999999885 78999999998875433333322 345
Q ss_pred EEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEe
Q psy11701 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444 (745)
Q Consensus 365 ~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~ 444 (745)
.|.|..+...|.|.|+|.|.|..|.....+.+.+..+|.+|.++.+.. ....++.|.|.++ ....+.++.+|.|+|+.
T Consensus 159 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~-~~~~~~~l~w~~p-~~~~g~pi~~y~v~~~~ 236 (389)
T 2jll_A 159 ILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIE-LSQTTAKVSFNKP-DSHGGVPIHHYQVDVKE 236 (389)
T ss_dssp EEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEE-ECSSCEEEEEECC-SCCTTSCEEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEee-ccCCEEEEEEeCC-CCCCCcceEEEEEEEEE
Confidence 799999999999999999999999998889999988999998888877 7889999999974 33445578899998876
Q ss_pred ccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCCCC-CCCCCCceeEEEcCCceEEEE
Q psy11701 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG-VPGTVQSLEAIPLGSSAFYLK 523 (745)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~-~P~~p~~~~~~~~~~~~i~l~ 523 (745)
.+. ..+..... ......+.|.+|.+++.|.|+|.|.|..|.+.+|..+.+.+.+. +|.+| .+.....+.+++.|+
T Consensus 237 ~~~--~~~~~~~~-~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p-~~~~~~~~~~~v~l~ 312 (389)
T 2jll_A 237 VAS--EIWKIVRS-HGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSFKLS 312 (389)
T ss_dssp TTC--SCCEEEEC-STTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-CEEEEEETTTEEEEE
T ss_pred CCC--cccEEeec-cCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-ccccccCcCCEEEEE
Confidence 544 23333433 45667899999999999999999999999999999888888766 56666 577777899999999
Q ss_pred eeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCccee
Q psy11701 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597 (745)
Q Consensus 524 W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~ 597 (745)
|.+|.+.+++|.+|.|+|+..+...|..... + .....++.|.+|.|++.|+|+|.|.|..|.|++|...
T Consensus 313 W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~-~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~ 381 (389)
T 2jll_A 313 ITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----V-QGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYE 381 (389)
T ss_dssp ECCCCCCSSCCCEEEEEEEC-----CCBCCE----E-CTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEE
T ss_pred EECCCCCCCcccEEEEEEEeCCCCcceeEee----c-cCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeE
Confidence 9999888899999999999865544432211 2 4566889999999999999999999999999998663
No 6
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=3.6e-43 Score=364.43 Aligned_cols=361 Identities=24% Similarity=0.367 Sum_probs=282.2
Q ss_pred CCeeEeeccceeE---ecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccC-CCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVA---LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v---~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~~ 108 (745)
++.|+..|.+..+ .+|+++.|.|.+.|.|.|+|+|+|||.+|.......+...++.|.|.++ +.+|+|.|+|.|.|
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N 84 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATN 84 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEc
Confidence 3456677777776 5899999999999999999999999999975433222223456777776 78999999999999
Q ss_pred CCeeeEEEEEEEEEEecCeEEec-CceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCCCceeecCceEEEcc
Q psy11701 109 GVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~~~~~-~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~ 186 (745)
..|...+..+.|.+...+.+... +....+.+|+.+.|.|... +.|.+.+.|++++..+.... ........+.|.|.+
T Consensus 85 ~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~L~I~~ 163 (384)
T 3kld_A 85 SFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDN-RRFVSQETGNLYIAK 163 (384)
T ss_dssp TTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSS-SEEECTTTCCEEESS
T ss_pred CcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeec-cEEEEcCCCcEEEee
Confidence 99987766677777665555433 3457789999999999764 46778999999998875221 111223457899999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEE---EEEEEe------ecCCee-eeCCCceEEecCceEEEEEEEeecCCCeEEEeeCC
Q psy11701 187 LRKSDTGNYGCNATNSLGYVYKD---VYVNVL------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~~~---~~l~v~------~~~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~ 256 (745)
+..+|+|.|+|.|.|..+..... ..+.+. ..+|.+ ...+....+.+|+.+.|.|.+.+.|.+.+.|++++
T Consensus 164 v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~ 243 (384)
T 3kld_A 164 VEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRAD 243 (384)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETT
T ss_pred cCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCC
Confidence 99999999999999987754321 122221 112333 33456677889999999999999999999999954
Q ss_pred -EEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecC
Q psy11701 257 -KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335 (745)
Q Consensus 257 -~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~ 335 (745)
..+..........+.|.|.+++.+|+|.|+|.|.|..|.......|.|..+|.+...+....+..|+.+.|.|.+.|.|
T Consensus 244 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P 323 (384)
T 3kld_A 244 GKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRP 323 (384)
T ss_dssp CCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEES
T ss_pred CccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccC
Confidence 4454433333445689999999999999999999999999899999999999888888888999999999999999998
Q ss_pred CCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 336 ~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
. +.+.|++++..+.. ..++.. .++.|.|..+...|.|.|+|.|.|..|....++.|.|.
T Consensus 324 ~--p~i~W~k~g~~l~~--~~~~~~-~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 324 K--PTYRWLKNGDPLLT--RDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp C--CEEEEEETTEECCC--BTTEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred C--CeEEEEECCEECCC--CccEEE-eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 6 78999999998863 333333 34589999999999999999999999999999888874
No 7
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-42 Score=364.62 Aligned_cols=367 Identities=26% Similarity=0.454 Sum_probs=306.3
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEee-cCCCeeEEEECCEecCCC--CCeEeccCCcEEEEccC-----CCCCCEEE
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGG-TPLPQTIWSKDGVPINPS--DRISQGNYGKSLIIKHV-----EFSDQGSY 102 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~~v~W~~~~~~i~~~--~~~~~~~~~~~L~i~~~-----~~~d~G~Y 102 (745)
..+..+..+|++..+.+|++++|.|.+.+ .|.+.+.|+|||..+... .+..... +++|.|.++ +.+|+|.|
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~-~~~l~i~~~~~~~~~~~D~G~Y 97 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLP-NGSLLIQNILHSRHHKPDEGLY 97 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECT-TSCEEECSCCCBTTBCSSCEEE
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEec-CCcEEEeeeeccCCCCCcceEE
Confidence 44677889999999999999999999976 577899999999998753 4444433 446888877 77899999
Q ss_pred EEEEEeC-CeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce-eecCc
Q psy11701 103 TCEVSNG-VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-KVGPN 180 (745)
Q Consensus 103 ~C~~~~~-~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~-~~~~~ 180 (745)
+|.+.+. .+...+..+.|.|..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|+|+|..+.......+. ...++
T Consensus 98 ~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 177 (403)
T 3laf_A 98 QCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG 177 (403)
T ss_dssp EEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS
T ss_pred EEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc
Confidence 9999864 455555678889988998888888899999999999999999999999999999888644333333 33467
Q ss_pred eEEEccCCCCCCEEEEEEEEeCCceEE-EEEEEEEeecC-----CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEee
Q psy11701 181 RITIENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHA-----PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254 (745)
Q Consensus 181 ~L~i~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v~~~~-----p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~ 254 (745)
.|.|.++..+|+|.|+|.+.|..+... ..+.+.|...+ +.+...+....+.+|+.++|.|.+.+.|.+.+.|++
T Consensus 178 ~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 257 (403)
T 3laf_A 178 ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLR 257 (403)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE
T ss_pred eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEE
Confidence 899999999999999999999877633 34666665433 134556777888999999999999999999999999
Q ss_pred CCEEcc--CceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEE
Q psy11701 255 NQKELT--GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332 (745)
Q Consensus 255 ~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~ 332 (745)
++..+. ..++.....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+..|+.+.|.|.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~ 337 (403)
T 3laf_A 258 GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVS 337 (403)
T ss_dssp TTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEE
T ss_pred CCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEe
Confidence 998875 345555566789999999999999999999999999999999999999988888888889999999999999
Q ss_pred ecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccC
Q psy11701 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402 (745)
Q Consensus 333 ~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp 402 (745)
+.|. +.+.|++++..+. ............|.|..+...|.|.|+|.|.|..|.....+.|.|..||
T Consensus 338 g~p~--p~v~W~~~g~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 338 GKPV--PTVNWMKNGDVVI--PSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp EESC--CEEEEEETTEECC--CSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred eccC--CEEEEEECCEECC--CCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 9886 6899999998876 3344555566789999999999999999999999999999999887664
No 8
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=4.9e-40 Score=376.69 Aligned_cols=531 Identities=21% Similarity=0.283 Sum_probs=377.1
Q ss_pred CCCCeeEe-eccceeEecCCcEEEEEEEeecCCCeeEEEECCEec------CCCCCeEeccCCcEEEEccCCCCCCEEEE
Q psy11701 31 HAPKQQYV-TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI------NPSDRISQGNYGKSLIIKHVEFSDQGSYT 103 (745)
Q Consensus 31 ~~p~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 103 (745)
.+|.+... .+....+.+|++++|.|.+.|.|.+.+.|+|++... ....++. ..+++|.|.+++.+|+|.|+
T Consensus 245 ~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~ 322 (816)
T 3dmk_A 245 AVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVK--QVSGTLIIKDAVVEDSGKYL 322 (816)
T ss_dssp CCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEE--EETTEEEECSCCGGGCEEEE
T ss_pred CCCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceE--eccceEEECCCCHhHCEEEE
Confidence 34544322 235678899999999999999999999999954322 2233443 23568999999999999999
Q ss_pred EEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEE
Q psy11701 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183 (745)
Q Consensus 104 C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~ 183 (745)
|.|.|..|... ..+.|.|..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|+|+|..+.. ..+.|.
T Consensus 323 C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~---------~~~~L~ 392 (816)
T 3dmk_A 323 CVVNNSVGGES-VETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH---------SESVLR 392 (816)
T ss_dssp EEEECSSCEEE-EEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSC---------CSSEEE
T ss_pred EEEEcCCCceE-EEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCC---------CCCEEE
Confidence 99999888765 66888998888888889999999999999999999999999999999998863 246899
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEEEEEEEe--ecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVL--AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~--~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~ 261 (745)
|.+++.+|+|.|+|.+.|..|.....+.+.|. ..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 393 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~ 472 (816)
T 3dmk_A 393 IESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIAN 472 (816)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCS
T ss_pred EcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCC
Confidence 99999999999999999999987777777764 3578888878888899999999999999999999999999988754
Q ss_pred c-eEEE----eecC----cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEE
Q psy11701 262 G-RYTI----LETG----DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332 (745)
Q Consensus 262 ~-~~~~----~~~~----~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~ 332 (745)
. ++.. ...+ .|.|.++...|+|.|+|.|.|..|.....+.|.|..+|.+. .+....+..|+.+.|.|.+.
T Consensus 473 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~-~~~~~~v~~G~~v~l~C~~~ 551 (816)
T 3dmk_A 473 NDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIR-QMEKKAIVAGETLIVTCPVA 551 (816)
T ss_dssp CTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEEC-CCCCEEEETTCCEEEECCEE
T ss_pred CCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeE-ccCCeEEecCCeEEEEEEec
Confidence 3 3322 1122 59999999999999999999999999999999999888654 44456788999999999999
Q ss_pred ecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCC-CCCCEEEEEEEEeCCceE-EEEEEEEEeccCCCC----C
Q psy11701 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS-ELDSGQYTCRAQTELDFI-EAQATLTVQVPLEAP----S 406 (745)
Q Consensus 333 ~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~~~g~y~c~a~n~~g~~-~~~~~l~v~~pp~~P----~ 406 (745)
+.|. ..+.|++++..+.. ..+.....++.|.|..+. ..|.|.|+|.|.|..|.. .....+.+..+|... .
T Consensus 552 g~p~--~~i~W~k~~~~l~~--~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~ 627 (816)
T 3dmk_A 552 GYPI--DSIVWERDNRALPI--NRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFE 627 (816)
T ss_dssp CSSE--EEEEEEETTEESCC--STTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCC
T ss_pred CCCC--CEEEEEECCeEccc--CCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCcccccccc
Confidence 8875 68999999998863 344555567789999998 589999999999999853 445667776554322 1
Q ss_pred CceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCC----ceeEEEEccCceeEEEecccccCcceeEEEEE
Q psy11701 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLA 482 (745)
Q Consensus 407 ~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a 482 (745)
...+ ..+..+.|.|....... ...+. |..++... ....... ......+.|..+.....+.|+|.|
T Consensus 628 ~~~~---~~G~~v~L~C~~~~~~~------~~~i~-W~~~g~~l~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a 696 (816)
T 3dmk_A 628 EGPA---QVGQYLTLHCSVPGGDL------PLNID-WTLDGQAISEDLGITTSRV-GRRGSVLTIEAVEASHAGNFTCHA 696 (816)
T ss_dssp SSCE---ESSCEEEEEEBCCCSSS------CCEEE-EEETTBCCCGGGTCEEEEE-TTTEEEEEEESCCGGGCEEEEEEE
T ss_pred cccc---CCCCeEEEEEEEeCCCC------CCEEE-EEECCeEcCCCCCeeEEEc-CCCeeEEEEccCChhhCEEEEEEE
Confidence 2222 56788999998632111 12333 33332211 1111122 345678999999999999999999
Q ss_pred ecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccccc--cccc
Q psy11701 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL--PYIS 560 (745)
Q Consensus 483 ~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~ 560 (745)
.|..|....+..+.+...+..-..|.+..+ .....+.|.-..-.. +.- .|.|...+........... ...
T Consensus 697 ~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v--~~G~~v~l~C~~~g~---P~p--~i~W~k~~~~~~~~~~~~~~~~~~- 768 (816)
T 3dmk_A 697 RNLAGHQQFTTPLNVYVPPRWILEPTDKAF--AQGSDAKVECKADGF---PKP--QVTWKKAVGDTPGEYKDLKKSDNI- 768 (816)
T ss_dssp ECSSCEEEEEEEECEEEEEEEEECCCCEEE--ETTCCEEEECEEEEE---SCC--EEECCEECSSSTTCCBCCCCBTTE-
T ss_pred EeCCccEEEEEEEEEEeCCceeeeccccee--cCCCcEEEEEEEecC---CCC--eEEEEecCCCCCccccccccCCCE-
Confidence 999887655544444321110012222221 123333333221100 000 2444433221111000000 000
Q ss_pred CCCcceeeecCCCCCccEEEEEEEEecCCCCCCccee
Q psy11701 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597 (745)
Q Consensus 561 ~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~ 597 (745)
........|.++.....=.++..|.|..|.+..+...
T Consensus 769 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~ 805 (816)
T 3dmk_A 769 RVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIM 805 (816)
T ss_dssp EEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEE
T ss_pred EecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEE
Confidence 0012357788888877777888999999988765443
No 9
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=2.8e-42 Score=359.61 Aligned_cols=355 Identities=20% Similarity=0.359 Sum_probs=283.1
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEE-CCEecCCCCCeEeccCCcEEEEccCCCCC------CEEEEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSD------QGSYTC 104 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~i~~~~~~~~~~~~~~L~i~~~~~~d------~G~Y~C 104 (745)
+|.+...++....+.+|+.++|.|.+.|.|.+++.|+| ||.++....+......+++|.|.+++.+| +|.|+|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C 82 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYAC 82 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEE
Confidence 34444433344668899999999999999999999999 88888765443333456689999999997 999999
Q ss_pred EEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCC---CeEEEEeCCEeccCCC--CCCce-eec
Q psy11701 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE---PEIHWVHNGKPISQAP--PNPRR-KVG 178 (745)
Q Consensus 105 ~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~---~~v~W~~~g~~~~~~~--~~~~~-~~~ 178 (745)
.|.|..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.+. +.+.|++++..+.... ...+. ...
T Consensus 83 ~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 2v5m_A 83 LARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLP 162 (388)
T ss_dssp EEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECT
T ss_pred EEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEcc
Confidence 99999988766778899988998888888889999999999999987543 6899999987764221 12222 335
Q ss_pred CceEEEccCCCCCC-EEEEEEEEeCCceEEE-E---EEEEEeec----CCee-eeCCCceEEecCceEEEEEEEeecCCC
Q psy11701 179 PNRITIENLRKSDT-GNYGCNATNSLGYVYK-D---VYVNVLAH----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 179 ~~~L~i~~v~~~d~-G~Y~C~~~~~~g~~~~-~---~~l~v~~~----~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
++.|.|.+++.+|+ |.|+|.+.|..+.... . ..+.|... +|.+ ........+.+|+.++|.|.+.+.|.+
T Consensus 163 ~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p 242 (388)
T 2v5m_A 163 SGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAP 242 (388)
T ss_dssp TSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCC
T ss_pred CCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCC
Confidence 67899999999999 9999999997643322 2 24444421 1211 112334568899999999999999999
Q ss_pred eEEEeeCCEEc------c-CceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEec
Q psy11701 249 EVNWIHNQKEL------T-GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321 (745)
Q Consensus 249 ~i~W~~~~~~~------~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~ 321 (745)
.+.|++++..+ . ..++. ...+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...|....+..
T Consensus 243 ~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~ 321 (388)
T 2v5m_A 243 SFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDF 321 (388)
T ss_dssp EEEEEEECTTSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECT
T ss_pred EEEEEecCCCCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecC
Confidence 99999974322 1 22222 3467899999999999999999999999998999999999888877788888999
Q ss_pred CCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398 (745)
Q Consensus 322 g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v 398 (745)
|+.+.|.|.+.+.|. +.+.|++++..+.. .+..|.|..+...|.|.|+|.|.|..|.....+.|.|
T Consensus 322 g~~~~l~C~~~g~p~--p~i~W~~~g~~i~~---------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 322 GRPAVFTCQYTGNPI--KTVSWMKDGKAIGH---------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp TSCEEEEEEEEEECC--CEEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCEEEEEEeccccC--CeEEEEECCEECcc---------CCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 999999999999886 68999999988752 2468999999999999999999999999998888876
No 10
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1e-41 Score=354.46 Aligned_cols=358 Identities=27% Similarity=0.415 Sum_probs=288.3
Q ss_pred CCeeEeeccceeE---ecCCcEEEEEEEeecCCCeeEEEECCEecCCC--CCeEeccCCcEEEEccCCC-CCCEEEEEEE
Q psy11701 33 PKQQYVTRKKEVA---LRNKKVELFCIFGGTPLPQTIWSKDGVPINPS--DRISQGNYGKSLIIKHVEF-SDQGSYTCEV 106 (745)
Q Consensus 33 p~~~~~~~~~~~v---~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~--~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~ 106 (745)
|+.|...|.+..+ .+|++++|.|.+.|.|.+++.|+|||..|... .++.. .+++|.|.++.. +|+|.|+|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~--~~~~L~i~~~~~~~D~G~Y~C~a 81 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRL--VAGDLVISNPVKAKDAGSYQCVA 81 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEE--ETTEEEEESCCHHHHCEEEEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEe--eCCeEEEecccccccCEEEEEEE
Confidence 5566777888776 78999999999999999999999999998754 44554 345899999997 9999999999
Q ss_pred EeCCeeeEEEEEEEEEEecCeEEec-CceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCCCcee-ecCceEE
Q psy11701 107 SNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRK-VGPNRIT 183 (745)
Q Consensus 107 ~~~~g~~~~~~~~l~V~~~p~~~~~-~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~L~ 183 (745)
.+..|...+..+.|.|...|.+... +....+.+|+++.|.|.+ .+.|.+.+.|++++..+.......... ...+.|.
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~ 161 (382)
T 1cs6_A 82 TNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLY 161 (382)
T ss_dssp EETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEE
T ss_pred EcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEE
Confidence 9998887666678888776665443 556788999999999996 457889999999987654322222222 2347899
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEE-----EEEEEee-----cCCeeee-CCCceEEecCceEEEEEEEeecCCCeEEE
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVYKD-----VYVNVLA-----HAPEITE-APKDEYTVDGKTVVLTCRVFGAPKPEVNW 252 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~~~-----~~l~v~~-----~~p~~~~-~~~~~~v~~g~~~~l~C~~~~~p~~~i~W 252 (745)
|.+++.+|+|.|+|.+.|..|..... +.+.+.. .+|.+.. .+....+.+|+.++|.|.+.+.|.+.+.|
T Consensus 162 i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W 241 (382)
T 1cs6_A 162 IAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW 241 (382)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEE
T ss_pred EEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEE
Confidence 99999999999999999877432221 3444321 2455544 35677889999999999999999999999
Q ss_pred eeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEE
Q psy11701 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332 (745)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~ 332 (745)
++++..+... .....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+..|+.+.|.|.+.
T Consensus 242 ~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 319 (382)
T 1cs6_A 242 RKLDGSQTSK--WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVAS 319 (382)
T ss_dssp EECCSCCSCC--CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEE
T ss_pred EECCcccccE--EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEee
Confidence 9988765431 11234579999999999999999999999999899999999999888888888899999999999999
Q ss_pred ecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 333 ~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
+.|. +.+.|++++..+... .++.. .++.|.|..+...|.|.|+|.|.|..|.....+.|.|.
T Consensus 320 g~p~--p~v~W~~~g~~~~~~--~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 320 GKPR--PAVRWLRDGQPLASQ--NRIEV-SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EESC--CEEEEEETTEECCCC--SSEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eecC--CEEEEEECCEECCCC--ceEEE-ECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9886 679999999988743 34433 34589999999999999999999999999988888875
No 11
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=1.9e-38 Score=353.26 Aligned_cols=511 Identities=17% Similarity=0.201 Sum_probs=352.7
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC-------------------CCCeEeccCCcEEEEccCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-------------------SDRISQGNYGKSLIIKHVEF 96 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~-------------------~~~~~~~~~~~~L~i~~~~~ 96 (745)
+..+|....+.+|++++|.|...+.+...+.|+|++..... .+|..+.. +.+|.|.+++.
T Consensus 2 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~-~~sL~I~~v~~ 80 (642)
T 1e07_A 2 LTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYP-NASLLIQNIIQ 80 (642)
T ss_pred ceEeccCCcccccccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeecc-CCcEEECCCCc
Confidence 45677888899999999999986666779999994432211 11222222 34799999999
Q ss_pred CCCEEEEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCC
Q psy11701 97 SDQGSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173 (745)
Q Consensus 97 ~d~G~Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~ 173 (745)
+|+|.|+|.+.+.........+.|.|.. +|.+... ....+.+|+.+.|.|.+.+ |.+.++|+++|..+..... .
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~-~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~-~ 157 (642)
T 1e07_A 81 NDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSN-NSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPR-L 157 (642)
T ss_pred ccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEcc-CceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCc-e
Confidence 9999999999876433334566777765 4444443 3456889999999999998 8899999999998874321 1
Q ss_pred ceeecCceEEEccCCCCCCEEEEEEEEeCCceE-EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEE
Q psy11701 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252 (745)
Q Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~-~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W 252 (745)
......+.|.|.++..+|+|.|+|.+.|..|.. ...+.|.|...|+.....+....+.+|+.++|.|.+.+.|.+.+.|
T Consensus 158 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W 237 (642)
T 1e07_A 158 QLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSW 237 (642)
T ss_pred EEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEE
Confidence 222345789999999999999999999988764 3457788876565556667777889999999999999999999999
Q ss_pred eeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEE--EEEEEEeec---ceeecCCCcEEEecCCeEEE
Q psy11701 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG--SGSLTVKEH---THITDQPEDYEVEAGQSATF 327 (745)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~--~~~l~v~~~---p~~~~~p~~~~~~~g~~~~l 327 (745)
++++..+. ....|.|.++..+|+|.|+|.|.|..|.... ...|.|..+ |.+. .+....+..|+.+.|
T Consensus 238 ~~~g~~i~-------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~~~~g~~v~l 309 (642)
T 1e07_A 238 FVNGTFQQ-------STQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFIT-SNNSNPVEDEDAVAL 309 (642)
T ss_pred EECCeEcc-------cCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEE-cCCceeEecCCcEEE
Confidence 99998773 2457999999999999999999998876543 455666543 2222 233344566888999
Q ss_pred EEEEEecCCCCcEEEEeeCCeeccCCCCCeEEE-cCCeEEEEecCCCCCCEEEEEEEEeCCceE-EEEEEEEEeccCCCC
Q psy11701 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFI-EAQATLTVQVPLEAP 405 (745)
Q Consensus 328 ~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~pp~~P 405 (745)
.|.+.+.+ +.+.|++++..+... .++.. .....|.|..+...|.|.|+|.|.|..|.. ...+.|.|..+|..|
T Consensus 310 ~C~~~~~p---~~v~W~~~g~~l~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~ 384 (642)
T 1e07_A 310 TCEPEIQN---TTYLWWVNNQSLPVS--PRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDP 384 (642)
T ss_pred EEECCCCC---ccEEEEECCccCCCc--CCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCC
Confidence 99998875 579999999887632 23332 345689999999999999999999999864 345778887665443
Q ss_pred CCc-eeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEec
Q psy11701 406 SNF-TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484 (745)
Q Consensus 406 ~~~-~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n 484 (745)
... .......+..+.|.|.....+. -.+ .|.+++.. ......+.|.++.....+.|+|.|.|
T Consensus 385 ~~~~~~~~~~~g~~~~l~C~~~g~p~-------~~i-~W~~~g~~---------~~~~~~L~i~~~~~~d~G~Y~C~a~n 447 (642)
T 1e07_A 385 TISPSYTYYRPGVNLSLSCHAASNPP-------AQY-SWLIDGNI---------QQHTQELFISNITEKNSGLYTCQANN 447 (642)
T ss_pred eecCCceEecCCCcEEEEEEcCccCC-------CeE-EEEECCEE---------cCCCceEEEccCChhhCeEEEEEEEc
Confidence 211 1112256678899998732211 133 33333211 12345688899999999999999999
Q ss_pred CCCCCCCCcceEEeCCCCCCCCCCcee----EEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccccccccc
Q psy11701 485 GAYNGPPSEIISFVTPEGVPGTVQSLE----AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560 (745)
Q Consensus 485 ~~G~g~~S~~~~~~t~~~~P~~p~~~~----~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 560 (745)
..|....+..+.+.... .+.+| .+. ........+.|.+.... + .-.+.|...+........ ..+
T Consensus 448 ~~g~~~~s~~~~v~v~~-~~~~p-~i~~~~~~~v~~g~~v~l~C~~~~----~--~~~i~W~~~g~~l~~~~~---~~~- 515 (642)
T 1e07_A 448 SASGHSRTTVKTITVSA-ELPKP-SISSNNSKPVEDKDAVAFTCEPEA----Q--NTTYLWWVNGQSLPVSPR---LQL- 515 (642)
T ss_pred CCCCCcccceEEEEEec-cCCCc-eEecCCceeecCCCeEEEEEECCC----C--CcEEEEEECCEeCCCCCc---EEE-
Confidence 99887666544443321 11111 111 12224567888887641 1 124556543322111000 001
Q ss_pred CCCcceeeecCCCCCccEEEEEEEEecCCCCC
Q psy11701 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592 (745)
Q Consensus 561 ~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~ 592 (745)
......+.|.++.......++..|.|..|...
T Consensus 516 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 516 SNGNRTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred cCCCcEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 12235788888888888888889999988643
No 12
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.6e-41 Score=356.25 Aligned_cols=367 Identities=22% Similarity=0.409 Sum_probs=294.9
Q ss_pred CCCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCC--CCeEeccCCcEEEEc----cCCCCCCEEEE
Q psy11701 30 RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS--DRISQGNYGKSLIIK----HVEFSDQGSYT 103 (745)
Q Consensus 30 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~--~~~~~~~~~~~L~i~----~~~~~d~G~Y~ 103 (745)
..+|.+....+.+..+.+|++++|.|.+.|.|.+.+.|+|+|..+... .++.....+++|.|. +++.+|+|.|+
T Consensus 14 ~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~ 93 (404)
T 3p3y_A 14 TQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQ 93 (404)
T ss_dssp CCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEE
T ss_pred cCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEE
Confidence 356777777789999999999999999999999999999999988642 344444455667765 88999999999
Q ss_pred EEEEeCCeeeEEEEEEEEEEecCeEEec-CceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCCCceeecCce
Q psy11701 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181 (745)
Q Consensus 104 C~~~~~~g~~~~~~~~l~V~~~p~~~~~-~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 181 (745)
|.+.+..|...+..+.|.|..+|.+... +....+.+|+++.|.|.+ .+.|.+.+.|++++....... .......++.
T Consensus 94 C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~ 172 (404)
T 3p3y_A 94 CFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD-KRVSQGHNGD 172 (404)
T ss_dssp EEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCC-SSEEECTTSC
T ss_pred EEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCC-CcEEEcCCCc
Confidence 9999998888777899999988866443 455788999999999999 788899999999875443211 1122335678
Q ss_pred EEEccCCCCC-CEEEEEEEEeCCceEEEE---EEEEEee------cCCeeeeCC---CceEEecCceEEEEEEEeecCCC
Q psy11701 182 ITIENLRKSD-TGNYGCNATNSLGYVYKD---VYVNVLA------HAPEITEAP---KDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 182 L~i~~v~~~d-~G~Y~C~~~~~~g~~~~~---~~l~v~~------~~p~~~~~~---~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
|.|.++...| +|.|+|.+.|..+..... +.+.+.. .+|.+...+ ....+.+|+.++|.|.+.+.|.+
T Consensus 173 l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~ 252 (404)
T 3p3y_A 173 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTP 252 (404)
T ss_dssp EEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCC
T ss_pred EEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCC
Confidence 9999999999 599999999987764332 4455542 133333222 23468899999999999999999
Q ss_pred eEEEeeCCEEccCceE-EEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEE
Q psy11701 249 EVNWIHNQKELTGGRY-TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327 (745)
Q Consensus 249 ~i~W~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l 327 (745)
.+.|++++..+..... .....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+....+..|+.+.|
T Consensus 253 ~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l 332 (404)
T 3p3y_A 253 DIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRL 332 (404)
T ss_dssp EEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEE
T ss_pred cEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEE
Confidence 9999999988765433 333456899999999999999999999999999999999999999888888899999999999
Q ss_pred EEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 328 ~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
.|.+.+.|. +.+.|++++..+............+..|.|..+...|.|.|+|.|.|..|.....+.|.|.
T Consensus 333 ~C~~~g~p~--p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 333 VCRANGNPK--PTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp ECEEEEESC--CEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEccccCC--CceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 999999886 6799999999887543222222334589999999999999999999999999988888774
No 13
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.4e-39 Score=372.82 Aligned_cols=524 Identities=15% Similarity=0.244 Sum_probs=365.7
Q ss_pred CeeEeeccc-eeEecCCcEEEEEEEeecCCCeeEEEE-CCEecCCCCCeEeccCCcEEEEccCCCCC------CEEEEEE
Q psy11701 34 KQQYVTRKK-EVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSD------QGSYTCE 105 (745)
Q Consensus 34 ~~~~~~~~~-~~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~i~~~~~~~~~~~~~~L~i~~~~~~d------~G~Y~C~ 105 (745)
+.|..+|.+ +.+.+|++++|.|.+.|.|.|++.|+| ||+.+....+......+++|.|.+++.+| +|.|+|.
T Consensus 39 P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g~l~i~~~~~~~~~~~~d~G~Y~C~ 118 (816)
T 3dmk_A 39 PVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACL 118 (816)
T ss_dssp EEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEE
T ss_pred CcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeCCcEEEcCCChHHccccccceEEEEE
Confidence 445555665 568889999999999999999999999 89988754443333445689999999887 8999999
Q ss_pred EEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeec-CC--CeEEEEeCCEeccC--CCCCCcee-ecC
Q psy11701 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL-PE--PEIHWVHNGKPISQ--APPNPRRK-VGP 179 (745)
Q Consensus 106 ~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~--~~v~W~~~g~~~~~--~~~~~~~~-~~~ 179 (745)
|.|..|...+..+.|.+...+.+...+....+.+|+++.|.|.+.+. +. +.+.|++++..+.. .....+.. ..+
T Consensus 119 a~n~~G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~r~~~~~~ 198 (816)
T 3dmk_A 119 ARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS 198 (816)
T ss_dssp EEETTEEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCBTTTEEECTT
T ss_pred EecCcceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEeccccCCCceEEEecC
Confidence 99999998888888888878877777888889999999999998653 22 58999998865431 11233433 356
Q ss_pred ceEEEccCCCCCC-EEEEEEEEeCCceEE-E---EEEEEEee----cCCeeeeCC--CceEEecCceEEEEEEEeecCCC
Q psy11701 180 NRITIENLRKSDT-GNYGCNATNSLGYVY-K---DVYVNVLA----HAPEITEAP--KDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 180 ~~L~i~~v~~~d~-G~Y~C~~~~~~g~~~-~---~~~l~v~~----~~p~~~~~~--~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
+.|.|.+++.+|+ |.|+|.+.+...... . ...+.+.. .+|.+...+ ....+..|+.++|.|.+.+.|.+
T Consensus 199 g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 278 (816)
T 3dmk_A 199 GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVP 278 (816)
T ss_dssp SCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCC
T ss_pred ceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEEEeeecCCC
Confidence 7999999999998 999999997654322 1 13444432 134443222 34567899999999999999999
Q ss_pred eEEEeeCCEEc-------cCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEec
Q psy11701 249 EVNWIHNQKEL-------TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321 (745)
Q Consensus 249 ~i~W~~~~~~~-------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~ 321 (745)
.+.|++++... ...+.. ...++|.|.+++.+|+|.|+|.|.|..|.......|.|..++.+...|....+..
T Consensus 279 ~v~W~k~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~ 357 (816)
T 3dmk_A 279 VFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDF 357 (816)
T ss_dssp EEEEEEECTTSSCEEECCCSSSEE-EETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCT
T ss_pred eEEEEeCCCCCccCcceecCCceE-eccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecC
Confidence 99999853211 122222 3456899999999999999999999999888888999988887777777888899
Q ss_pred CCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 322 g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
|+.+.|.|.+.+.|. +.+.|++++..+.. ....|.|..+...|.|.|+|.+.|..|.......+.+...
T Consensus 358 G~~v~l~C~~~g~p~--~~v~W~k~g~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 426 (816)
T 3dmk_A 358 GRPAVFTCQYTGNPI--KTVSWMKDGKAIGH---------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGR 426 (816)
T ss_dssp TSCEEEEEEEEEECC--CEEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCS
T ss_pred CCCEEEEEEEeccCC--CEEEEEECCEECCC---------CCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccc
Confidence 999999999999876 78999999988752 2457999999999999999999999998888888877654
Q ss_pred CCCCCCcee---EEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCC---ceeEE--EE--ccCceeEEEecccc
Q psy11701 402 LEAPSNFTL---IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG---SIREL--IV--NKGESTTTEVDKFV 471 (745)
Q Consensus 402 p~~P~~~~~---~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~---~~~~~--~~--~~~~~~~~~i~~L~ 471 (745)
..+|..... ..+..+..+.|.|....... ..+. |..++... ..... .+ .......+.|..+.
T Consensus 427 ~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~-------p~v~-W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 498 (816)
T 3dmk_A 427 FDPPVIRQAFQEETMEPGPSVFLKCVAGGNPT-------PEIS-WELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVH 498 (816)
T ss_dssp SCCCEEEEECCCEEECSSSCEEEEEEEECSSC-------CEEE-EEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCC
T ss_pred cCCCceEecCcceEEcCCCCEEEEEEEecCCC-------CEEE-EEECCEECCCCCCcccccEEecCCCcEEEEEEeecc
Confidence 455522111 12245678888887632111 1332 33322110 01111 11 11223468889999
Q ss_pred cCcceeEEEEEecCCCCCCCCcceEEeCCCCCCC--CCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCccc
Q psy11701 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG--TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549 (745)
Q Consensus 472 ~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~--~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~ 549 (745)
......|+|.|.|..|....+..+.+.. +|. .+.. ........+.|....... +. -.+.|...+....
T Consensus 499 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~---~p~~~~~~~--~~v~~G~~v~l~C~~~g~---p~--~~i~W~k~~~~l~ 568 (816)
T 3dmk_A 499 ANDGGLYKCIAKSKVGVAEHSAKLNVYG---LPYIRQMEK--KAIVAGETLIVTCPVAGY---PI--DSIVWERDNRALP 568 (816)
T ss_dssp TTTCEEEEEEEEETTEEEEEEEEEEECS---SCEECCCCC--EEEETTCCEEEECCEECS---SE--EEEEEEETTEESC
T ss_pred ccCCEEEEEEEEECCCeEEEEEEEEEec---CCeeEccCC--eEEecCCeEEEEEEecCC---CC--CEEEEEECCeEcc
Confidence 9999999999999988765554444432 231 1112 222345667777754321 21 2566665443211
Q ss_pred CCcccccccccCCCcceeeecCCC-CCccEEEEEEEEecCCCCC
Q psy11701 550 GPLLERLPYISDPTTTSAKLAGLE-PSTKYRIHLAGYTKAGDGA 592 (745)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~l~~L~-p~t~Y~~~V~a~n~~G~g~ 592 (745)
..... .+ .....+.|.++. ......++..|.|..|.+.
T Consensus 569 ~~~~~---~~--~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~ 607 (816)
T 3dmk_A 569 INRKQ---KV--FPNGTLIIENVERNSDQATYTCVAKNQEGYSA 607 (816)
T ss_dssp CSTTE---EE--CTTSEEEESSCCHHHHCEEEEEEEEESSSCEE
T ss_pred cCCce---EE--ecCCeEEEEecCccccCEEEEEEEEECCCcee
Confidence 11100 01 122467788886 5667778888999988543
No 14
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=375.75 Aligned_cols=454 Identities=17% Similarity=0.163 Sum_probs=331.2
Q ss_pred CceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCC-CCEEEEEEEEeCCceEEEE-EEEEE---eec
Q psy11701 233 GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA-DSGEYTCFARNKLGTAQGS-GSLTV---KEH 307 (745)
Q Consensus 233 g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~n~~g~~~~~-~~l~v---~~~ 307 (745)
...+.|.|.+.|.|.+.+.|.++|..+..-+ .+.+.|..+... ..+.|.|.+.+..|..... ..+.+ ..+
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~-----~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~ 165 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWN-----RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRT 165 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCE-----EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSS
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCcee-----EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccc
Confidence 4589999999999999999999997764321 234556554233 3478899887777764322 22221 134
Q ss_pred ceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEE-Ee--eCCeeccCCCCCeEEEcC---CeEEEEecCCCCCCEEEEE
Q psy11701 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV-WL--RGSEPIDFESEPRFVQSN---DYSLTVTKSSELDSGQYTC 381 (745)
Q Consensus 308 p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~-W~--~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~~~g~y~c 381 (745)
|.+. .+....+..|+.+.|.|.+.+.|.+. +. |+ +++..+... ....... .+.|.|.++...|.|.|+|
T Consensus 166 p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~--i~~W~~~~~g~~l~~~--~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c 240 (731)
T 2v5y_A 166 PHFL-RIQNVEVNAGQFATFQCSAIGRTVAG--DRLWLQGIDVRDAPLK--EIKVTSSRRFIASFNVVNTTKRDAGKYRC 240 (731)
T ss_dssp CEEC-CCCCEEEETTSCEEEEEEEESCCCTT--CEEEEEESSSCCEEEE--EEEECCSSEEEEEEEECSCCTTTCEEEEE
T ss_pred cccc-cccceEEeCCCcEEEEEEeCCCCCCc--eeEEEecCCCcccccc--ceEEeccccceEEEEEcccccccCeEEEE
Confidence 5555 56678899999999999999998754 44 77 677655421 1111111 2689999999999999999
Q ss_pred EEEeCCce-EEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccC
Q psy11701 382 RAQTELDF-IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460 (745)
Q Consensus 382 ~a~n~~g~-~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~ 460 (745)
.|.|..|. ....+.|.+..+|.+|..+.+.. .+.+++.|.|.++ ...+++++.+|.|+|+.... .+..+. ..
T Consensus 241 ~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~-~~~~~v~l~w~~~-~~~g~~~i~~Y~v~~~~~~~---~~~~~~--~~ 313 (731)
T 2v5y_A 241 MIRTEGGVGISNYAELVVKEPPVPIAPPQLAS-VGATYLWIQLNAN-SINGDGPIVAREVEYCTASG---SWNDRQ--PV 313 (731)
T ss_dssp EEEETTEEEECCCEEEEEECCCCBSSCCEEEE-ECSSCEEEECCCS-SBSSCSCCCEEEEEEEESSS---SCEEEE--EC
T ss_pred EEECCCCCcceeeEEEEEecCCCCCCCcceec-cCCceEEEEeCCc-ccCCCCccEEEEEEEEECCC---CceEEe--cc
Confidence 99999997 56678899999999988888877 7889999999974 33455789999999877533 233333 24
Q ss_pred ceeEEEecccccCcceeEEEEEe--cCCCCCCCCcceEEeCCCCCC-CCCCceeEEEcCCceEEEEeeCCCC--CCCcee
Q psy11701 461 ESTTTEVDKFVPASKNFARVLAF--NGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQ--PNGVLM 535 (745)
Q Consensus 461 ~~~~~~i~~L~~~~~Y~~~V~a~--n~~G~g~~S~~~~~~t~~~~P-~~p~~~~~~~~~~~~i~l~W~~p~~--~~g~i~ 535 (745)
....++|.+|.+++.|.|+|.|. |..|.+.+|..+.++|.+..| .+|.++.+...+.++|.|+|++|.. .++.+.
T Consensus 314 ~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~ 393 (731)
T 2v5y_A 314 DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSY 393 (731)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSC
T ss_pred CcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceee
Confidence 55889999999999999999999 999999999989898887666 7899999999999999999999864 356789
Q ss_pred eEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCC-C---CC
Q psy11701 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV-E---GR 611 (745)
Q Consensus 536 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~-~---~~ 611 (745)
+|.|+|+......+..+....... ......++|.+|.|++.|.|+|.|+|..|.|+ |..+...+....+.. + ..
T Consensus 394 ~y~v~y~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~ 471 (731)
T 2v5y_A 394 NLTVHYCYQVGGQEQVREEVSWDT-ENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQ 471 (731)
T ss_dssp EEEEEEEEESSSSEEEEEEEECCS-SCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCE
T ss_pred eEEEEEEEccCCCCccceeEEEEe-cCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEE
Confidence 999999887643222221100112 45678999999999999999999999999985 655544433222111 1 10
Q ss_pred C-CCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCC
Q psy11701 612 G-STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690 (745)
Q Consensus 612 ~-~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~ 690 (745)
. ...+++.|+|++|. ..+|.|.+|.|.|+.......... .. .
T Consensus 472 ~~~~~~si~l~W~~P~--~~~g~i~~Y~V~~~~~~~~~~~~~----------------------------------~~-~ 514 (731)
T 2v5y_A 472 GSTFEEKIFLQWREPT--QTYGVITLYEITYKAVSSFDPEID----------------------------------LS-N 514 (731)
T ss_dssp EEEETTEEEEECCCCS--CCSSCCCEEEEEEEEEEECC---C----------------------------------CC-C
T ss_pred eeecCCeEEEEEcCCC--CCCCCccceEEEEEECcCCCcccc----------------------------------cc-C
Confidence 1 12578999999764 468899999999986532111000 00 0
Q ss_pred eEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeCCCCCc
Q psy11701 691 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGGT 743 (745)
Q Consensus 691 ~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~~~~ 743 (745)
........++.+++.|.+|.|++.|.|+|+|.|.+|.|++|+ +.++|..+++
T Consensus 515 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~~P 566 (731)
T 2v5y_A 515 QSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT-NQFTTKISAP 566 (731)
T ss_dssp CEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE-EEEECCCCCC
T ss_pred cceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc-cEEEcCCCCC
Confidence 011222356788999999999999999999999999999995 8888876553
No 15
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=5.1e-41 Score=351.10 Aligned_cols=358 Identities=23% Similarity=0.299 Sum_probs=281.4
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEee-cCCCeeEEEECCEecCCCC-CeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGG-TPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~~v~W~~~~~~i~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
|+.+...|.+..+.+|++++|.|.+.+ .|.+.+.|+|+|..|.... ++.....+++|.|.+++.+|+|.|+|.+.+..
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 85 (395)
T 1bih_A 6 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPA 85 (395)
T ss_dssp CCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCC
Confidence 555677889999999999999999998 7889999999999987654 45555566789999999999999999999988
Q ss_pred eeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCC---EeccCC-CCCCce-eecCceEEE
Q psy11701 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNG---KPISQA-PPNPRR-KVGPNRITI 184 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g---~~~~~~-~~~~~~-~~~~~~L~i 184 (745)
|...+..+.|.|...+.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++ ...... ....+. ...++.|.|
T Consensus 86 g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 165 (395)
T 1bih_A 86 GVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYF 165 (395)
T ss_dssp EEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEE
T ss_pred CeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEE
Confidence 876654455555443222334556778899999999996 78899999999986 222111 112232 234678999
Q ss_pred ccCCCCCCE---EEEEEEEeCCceEEEEEEEEE---ee---------cCCeeeeCCCceEEecCceEEEEEEEeecCCCe
Q psy11701 185 ENLRKSDTG---NYGCNATNSLGYVYKDVYVNV---LA---------HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249 (745)
Q Consensus 185 ~~v~~~d~G---~Y~C~~~~~~g~~~~~~~l~v---~~---------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~ 249 (745)
.+++.+|+| .|+|.+.|..+.......... .. .+|.+ .+....+.+|+.++|.|.+.+.|.+.
T Consensus 166 ~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~ 243 (395)
T 1bih_A 166 TIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGY 243 (395)
T ss_dssp EEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCC
T ss_pred EEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCe
Confidence 999999999 999999998887443322211 11 12222 35667889999999999999999999
Q ss_pred EEEeeCCEEccCc---eEEEe---ecCcEEEcccCCCCCEEEEEEEEeCCceEEE-EEEEEEeecceeecCCCc-EEEec
Q psy11701 250 VNWIHNQKELTGG---RYTIL---ETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPED-YEVEA 321 (745)
Q Consensus 250 i~W~~~~~~~~~~---~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~-~~~l~v~~~p~~~~~p~~-~~~~~ 321 (745)
+.|++++..+... ++... ....|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.+...+.. ..+..
T Consensus 244 i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~ 323 (395)
T 1bih_A 244 PNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQ 323 (395)
T ss_dssp CEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECT
T ss_pred EEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecC
Confidence 9999999887532 22221 1126999999999999999999999988654 889999999998888877 78899
Q ss_pred CCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398 (745)
Q Consensus 322 g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v 398 (745)
|+.+.|.|.+.+.|. +.+.|++++..+... ++.... +.|.|..+...|.|.|+|.|.|..|.....+.|.|
T Consensus 324 g~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~---~~~~~~-~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 324 GQDVTIPCKVTGLPA--PNVVWSHNAKPLSGG---RATVTD-SGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp TSCEEEECEEEEESC--CCCEEEETTEECCSS---SEEEET-TEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCeEEEEEEECcccC--CeeEEEECCEECCCC---ceEEEC-CEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999999999999887 569999999987632 444333 48999999999999999999999999988888876
No 16
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=349.98 Aligned_cols=354 Identities=16% Similarity=0.233 Sum_probs=246.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEecc-CCcEEEEccCCCCCCEEEEEEEEeCCeeeE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGN-YGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~ 114 (745)
++..+..+.|.+|+++.|.|.+.|.|.+.|.|++++..+.....+.... ...+|.|.+++.+|+|.|+|.|.|..|...
T Consensus 51 ~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~ 130 (423)
T 3qs7_E 51 TVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYT 130 (423)
T ss_dssp -----CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEE
T ss_pred ceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEE
Confidence 3456668999999999999999999999999999998876433322111 123699999999999999999999887765
Q ss_pred EEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCC--CceeecCceEEEccCCCCCC
Q psy11701 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDT 192 (745)
Q Consensus 115 ~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~--~~~~~~~~~L~i~~v~~~d~ 192 (745)
..+.|.|..+|.+.. .....+..|+.+.|.|.+.|.|.|.++|+|++..+...... .........| ...|+
T Consensus 131 -~~~~l~V~~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l-----~~~d~ 203 (423)
T 3qs7_E 131 -ILFTVSIRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVL-----HELFG 203 (423)
T ss_dssp -EEEEEEEC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEE-----CCCCS
T ss_pred -EEEEEEEecCccccc-cCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEE-----ecccC
Confidence 678888887665421 12223567888999999999999999999998765321110 0111111122 57899
Q ss_pred EEEEEEEEeCCceEEEE-EEEEEeecCCeeeeCCCceEEecCceEEEEEEEee-cCCCeEEEeeCCEEccCceEE-----
Q psy11701 193 GNYGCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG-APKPEVNWIHNQKELTGGRYT----- 265 (745)
Q Consensus 193 G~Y~C~~~~~~g~~~~~-~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~~~----- 265 (745)
|.|+|.|.|..|..... +.|.|.. +|.+ .+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+......
T Consensus 204 G~Y~C~A~N~~G~~~~~~~~l~V~~-~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~ 280 (423)
T 3qs7_E 204 TDIRCCARNELGRECTRLFTIDLNQ-TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTY 280 (423)
T ss_dssp SCEEEEEECSSCEEEEECEEEESSS-CCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEE
T ss_pred eEEEEEEEcCCCCcceeeEEEEEec-CCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccc
Confidence 99999999999876553 5666653 3333 455678899999999999998 667899999999877543211
Q ss_pred -----EeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCC--CcEEEecCCeEEEEEEEEecCCCC
Q psy11701 266 -----ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP--EDYEVEAGQSATFRCNAVSDPSLK 338 (745)
Q Consensus 266 -----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p--~~~~~~~g~~~~l~C~~~~~~~~~ 338 (745)
....+.|.|.++..+|+|.|+|.|.|. ....+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.
T Consensus 281 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~-- 355 (423)
T 3qs7_E 281 STNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ-- 355 (423)
T ss_dssp ETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESC--
T ss_pred cCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCC--
Confidence 223347999999999999999999887 6778889998888766555 3455678999999999999987
Q ss_pred cEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCCCC
Q psy11701 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407 (745)
Q Consensus 339 ~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~ 407 (745)
+.+.|++++..+..... . ......+.+......|.|.|+|.|.|..|....++.|.+..+|++|..
T Consensus 356 p~i~W~k~g~~l~~~~~--~-~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~ 421 (423)
T 3qs7_E 356 IRCTWTFSRKSFPCEQK--G-LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHH 421 (423)
T ss_dssp CEEEEEETTEEEECBCC--B-CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----------
T ss_pred CeEEEEECCEECCCccc--c-ccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCccccc
Confidence 78999999998863210 0 001122323556778999999999999999999999999988888754
No 17
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=5.1e-41 Score=364.35 Aligned_cols=350 Identities=17% Similarity=0.242 Sum_probs=283.3
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
|+.+...+.+..+.+|++++|.|.+.+ .+.|+|++.++. ......+|.|.+++.+|+|.|+|.+.+ |.
T Consensus 36 pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~------~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~ 103 (524)
T 2ec8_A 36 PPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET------NENKQNEWITEKAEATNTGKYTCTNKH--GL 103 (524)
T ss_dssp CCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC------EEECSSEEEESSCCSTTCEEEEEEETT--SC
T ss_pred CCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc------ccCccceEEEcccchhhCEEEEEeecC--Cc
Confidence 455566778899999999999999986 899999998772 234567899999999999999999988 43
Q ss_pred eEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe-CCEeccCCCCCCcee-ecCceEEEccCCCC
Q psy11701 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRK-VGPNRITIENLRKS 190 (745)
Q Consensus 113 ~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~-~g~~~~~~~~~~~~~-~~~~~L~i~~v~~~ 190 (745)
+..+.|.|..+|.+...+....+.+|+++.|.|.+.+.+.+.++|++ +|..+... .+.. ...+.|.|.+++.+
T Consensus 104 --~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~---~~~~~~~~~~L~i~~~~~~ 178 (524)
T 2ec8_A 104 --SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKD---LRFIPDPKAGIMIKSVKRA 178 (524)
T ss_dssp --EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSS---CEEEEETTTEEEEESCCGG
T ss_pred --ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCC---CceeECCCccEEEeccchh
Confidence 56788899888877777888889999999999999987768999998 78777532 2332 34678999999999
Q ss_pred CCE-EEEEEEEeCCceEEE-EEEEEEe---ecCCeeeeCCCceEEecCceEEEEEEEeecCCCe-EEEeeCCEEc--cCc
Q psy11701 191 DTG-NYGCNATNSLGYVYK-DVYVNVL---AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE-VNWIHNQKEL--TGG 262 (745)
Q Consensus 191 d~G-~Y~C~~~~~~g~~~~-~~~l~v~---~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~--~~~ 262 (745)
|+| .|+|.+.|..+.... .+.|.|. ..+|.+...+....+.+|+.++|.|.+.+.|.+. +.|++++..+ ...
T Consensus 179 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~ 258 (524)
T 2ec8_A 179 YHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK 258 (524)
T ss_dssp GTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEE
T ss_pred hCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccc
Confidence 999 999999988665533 5677776 3688888888888999999999999999988876 9999998773 211
Q ss_pred -eEE------EeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCC---CcEEEecCCeEEEEEEEE
Q psy11701 263 -RYT------ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP---EDYEVEAGQSATFRCNAV 332 (745)
Q Consensus 263 -~~~------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p---~~~~~~~g~~~~l~C~~~ 332 (745)
+.. ....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...| ....+..|+.+.|.|.+.
T Consensus 259 ~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~ 338 (524)
T 2ec8_A 259 YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYE 338 (524)
T ss_dssp EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEE
T ss_pred cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEe
Confidence 111 2234579999999999999999999999998889999999888766544 367889999999999999
Q ss_pred ecCCCCcE-EEEeeCCeeccCCCCCeEEEcC-------CeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccC
Q psy11701 333 SDPSLKLS-IVWLRGSEPIDFESEPRFVQSN-------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402 (745)
Q Consensus 333 ~~~~~~~~-i~W~~~~~~~~~~~~~~~~~~~-------~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp 402 (745)
+.|. +. +.|++++..+..... ++.... ...|.|..+...|.|.|+|.|.|..|.....+.|.|..+|
T Consensus 339 g~P~--p~~v~W~k~g~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 413 (524)
T 2ec8_A 339 AFPK--PEHQQWIYMNRTFTDKWE-DYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKP 413 (524)
T ss_dssp EESC--CCEEEEESSSCBCSSSBC-CEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE
T ss_pred ecCC--CcEEEEEECCeeccCCcc-ceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCC
Confidence 9887 45 999999988764332 222221 2589999999999999999999999998888999887654
No 18
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=348.32 Aligned_cols=348 Identities=16% Similarity=0.229 Sum_probs=250.0
Q ss_pred eeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCC-cEEEEccCCCCCCEEEEEEEEeCCeeeEEE
Q psy11701 38 VTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG-KSLIIKHVEFSDQGSYTCEVSNGVGEAKSY 116 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 116 (745)
..+..+.|.+|++++|.|.+.+.|..++.|++++..+.....+..++.+ .+|.|.+++.+|+|.|+|.|.+..+... .
T Consensus 53 ~~~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~-~ 131 (527)
T 3qs9_E 53 YEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYT-I 131 (527)
T ss_dssp ---CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEE-E
T ss_pred eeeeeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEE-E
Confidence 3444789999999999999998888899999999987755555433222 3599999999999999999998776544 3
Q ss_pred EEEEEEEecCeEEecCc-eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEE
Q psy11701 117 SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNY 195 (745)
Q Consensus 117 ~~~l~V~~~p~~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 195 (745)
.+.|.|. |.+...+. ......|+.+.|.|.+.|.|.|.++|++++..+.... ......-......+...|+|.|
T Consensus 132 ~~~v~v~--~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~G~Y 206 (527)
T 3qs9_E 132 LFTVSIR--NTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCK---EESPAVVKKEEKVLHELFGTDI 206 (527)
T ss_dssp EEEEEEC-------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC----------------CEEECCSEECCCCSSCE
T ss_pred EEEEEEC--CceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCcccc---ccCCcEEEEeeeeccccCCEEE
Confidence 3455544 43332222 2234568888999999999999999999887654211 0111111122334458899999
Q ss_pred EEEEEeCCceEEEE-EEEEEeecCCeeeeCCCceEEecCceEEEEEEEe-ecCCCeEEEeeCCEEccCceEE--------
Q psy11701 196 GCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKELTGGRYT-------- 265 (745)
Q Consensus 196 ~C~~~~~~g~~~~~-~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~-------- 265 (745)
+|.|.|..|..... +.|.|.. +|.+ .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+......
T Consensus 207 ~C~A~N~~G~~~~~~~~l~V~~-~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~ 283 (527)
T 3qs9_E 207 RCCARNELGRECTRLFTIDLNQ-TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN 283 (527)
T ss_dssp EEEEECSSCEEEEECEEEESSS-CCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETT
T ss_pred EEEEEeCCCcccceEEEEEEec-cCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccC
Confidence 99999999987665 6777764 4444 56677889999999999996 8899999999999876543211
Q ss_pred --EeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCC--cEEEecCCeEEEEEEEEecCCCCcEE
Q psy11701 266 --ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRCNAVSDPSLKLSI 341 (745)
Q Consensus 266 --~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~--~~~~~~g~~~~l~C~~~~~~~~~~~i 341 (745)
....+.|.|.+++.+|+|.|+|.|.|. ....+.|.|..+|.+...+. ...+..|+.+.|.|.+.+.|. +.+
T Consensus 284 ~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~--p~i 358 (527)
T 3qs9_E 284 RTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ--IRC 358 (527)
T ss_dssp TEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESC--CEE
T ss_pred cceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCC--CEE
Confidence 123346999999999999999999887 66778888988887655543 355678999999999999987 679
Q ss_pred EEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccC
Q psy11701 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402 (745)
Q Consensus 342 ~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp 402 (745)
.|++++..+..... . ......|.|..+...|.|.|+|.|.|..|.....+.|.|..+|
T Consensus 359 ~W~k~g~~l~~~~~--~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P 416 (527)
T 3qs9_E 359 TWTFSRKSFPCEQK--G-LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKP 416 (527)
T ss_dssp EEEETTEEEECBCC--B-CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCC
T ss_pred EEEECCEECcCCcc--c-ccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCC
Confidence 99999998863322 1 2245689999999999999999999999998888888887554
No 19
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.9e-38 Score=347.98 Aligned_cols=439 Identities=18% Similarity=0.249 Sum_probs=315.5
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCC---eeEEEECCEecC--------------CCCCeEecc---C-CcEEEEccCC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLP---QTIWSKDGVPIN--------------PSDRISQGN---Y-GKSLIIKHVE 95 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~i~--------------~~~~~~~~~---~-~~~L~i~~~~ 95 (745)
+..|+++.+.+|++++|.|.+.+.|.+ .+.|+|++..+. ..+|+.+.. . ..+|.|.+++
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 456778899999999999999887654 899999886431 123454432 2 2379999999
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEecc----CC-
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL-PEPEIHWVHNGKPIS----QA- 169 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~----~~- 169 (745)
.+|+|.|+|.|.+..+.. +..+.|.|..+|.+...+....+.+|+++.|.|.+.+. +.+.+.|+|++.... ..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~ 162 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGL-SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 162 (585)
T ss_pred cccCEEEEEEcccCCCCc-eEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCC
Confidence 999999999999877665 46799999999999888999999999999999999864 456899999876421 00
Q ss_pred -----CCCCceee--cC-----ceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEE
Q psy11701 170 -----PPNPRRKV--GP-----NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV 237 (745)
Q Consensus 170 -----~~~~~~~~--~~-----~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~ 237 (745)
....+... .. ..|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+| ....+.+|+.++
T Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p------~~~~~~~G~~v~ 236 (585)
T 2ocw_A 163 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEP------ELVYEDLRGSVT 236 (585)
T ss_pred cccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCC------ceeEEcCCCcEE
Confidence 01122221 11 2799999999999999999999999888888888875433 344677999999
Q ss_pred EEEEEeecCC---CeEEEe-eCCEE----c---------cCceEEEee---cC--cEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 238 LTCRVFGAPK---PEVNWI-HNQKE----L---------TGGRYTILE---TG--DLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 238 l~C~~~~~p~---~~i~W~-~~~~~----~---------~~~~~~~~~---~~--~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
|.|.+ +.+. +.+.|+ +++.. + ...++.+.. .+ .|.|.++..+|+|.|+|.|.|. |.
T Consensus 237 l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 314 (585)
T 2ocw_A 237 FHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQ 314 (585)
T ss_pred EEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CC
Confidence 99997 4443 578897 77631 1 123443332 34 6999999999999999999995 44
Q ss_pred EE-----EEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEE--EEee--CCe--eccC-------CCCCe
Q psy11701 296 AQ-----GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI--VWLR--GSE--PIDF-------ESEPR 357 (745)
Q Consensus 296 ~~-----~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i--~W~~--~~~--~~~~-------~~~~~ 357 (745)
.. ..+.|.|..+|.+...|....+..|+.+.|.|.+.+.|.+.+.+ .|++ ++. .+.. ....+
T Consensus 315 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r 394 (585)
T 2ocw_A 315 LQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGR 394 (585)
T ss_pred ccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCC
Confidence 33 77889999999888888888899999999999999888754433 8998 775 3321 01223
Q ss_pred EEEc---CCe--EEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCC---CCCceeEEeecCceeEEEEEeCCCC
Q psy11701 358 FVQS---NDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLIQVIDAKKAVVSWNPVSPQ 429 (745)
Q Consensus 358 ~~~~---~~~--~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~---P~~~~~~~~~~~~~v~l~W~~~~~~ 429 (745)
+... .++ .|.|..+...|.|.|+|.| |..|.....+.|.|..++.. |..+.+ ..+..+.|.|......
T Consensus 395 ~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v---~~G~~v~L~C~~~~~~ 470 (585)
T 2ocw_A 395 LSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTA---VLGETLKVPCHFPCKF 470 (585)
T ss_pred EEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeE---ecCCcEEEEEEecCCC
Confidence 3222 122 4999999999999999999 88898888888888753221 223332 5677899999874211
Q ss_pred CcceeeeeEEEEEEeccCCCCce-------e-EEEE-ccCceeEEEecccccCcceeEEEEEecCCCCCCCC
Q psy11701 430 SLRGHFRGYKVQTWTEKDGEGSI-------R-ELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492 (745)
Q Consensus 430 ~~~~~i~~y~i~~~~~~~~~~~~-------~-~~~~-~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S 492 (745)
.. .-.+.|. |.+++..... . ...+ .......++|.++...+...|.|.|.|..|.+...
T Consensus 471 ~~---~p~~~v~-W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 538 (585)
T 2ocw_A 471 SS---YEKYWCK-WNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETA 538 (585)
T ss_pred CC---CccEEEE-EeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEE
Confidence 11 1123443 3333321100 0 1111 02334688999999999999999999999876543
No 20
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=340.49 Aligned_cols=361 Identities=16% Similarity=0.236 Sum_probs=261.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--EecC------------CCCCeEeccC--CcEEEEccCCCCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPIN------------PSDRISQGNY--GKSLIIKHVEFSDQ 99 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i~------------~~~~~~~~~~--~~~L~i~~~~~~d~ 99 (745)
++..|....+.+|++++|.|.+.+.|.+.+.|+|++ ..+. ...|+..... ..+|.|.+++.+|+
T Consensus 3 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (523)
T 2rcj_C 3 VLTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDE 82 (523)
T ss_pred ccccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhC
Confidence 345677889999999999999998899999999974 2211 1245554332 34899999999999
Q ss_pred EEEEEEEEeCCeee--EEEEEEEEE----EecCeEEecCceeEeeCCCeEEEEEEEeecCCC--eEEEEeCCEeccCCCC
Q psy11701 100 GSYTCEVSNGVGEA--KSYSIDLSV----LAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVHNGKPISQAPP 171 (745)
Q Consensus 100 G~Y~C~~~~~~g~~--~~~~~~l~V----~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~--~v~W~~~g~~~~~~~~ 171 (745)
|.|+|.|.+..|.. ....+.|.| ..+|.+...+....+.+|+.+.|.|.+.|.|++ .++|+|+|..+.....
T Consensus 83 G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 162 (523)
T 2rcj_C 83 SDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVE 162 (523)
T ss_pred EEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceE
Confidence 99999999876532 224467777 457777777777777899999999999987654 9999999988864321
Q ss_pred CCce-eec------CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE---eecCCeeeeCCCceEEecCceEEEEEE
Q psy11701 172 NPRR-KVG------PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITEAPKDEYTVDGKTVVLTCR 241 (745)
Q Consensus 172 ~~~~-~~~------~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v---~~~~p~~~~~~~~~~v~~g~~~~l~C~ 241 (745)
.... ... .+.|.|.++..+|+|.|+|.|.|..+.....+.+.+ ...+|.+...+....+.+|+.++|.|.
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~ 242 (523)
T 2rcj_C 163 TTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCL 242 (523)
T ss_pred eccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEE
Confidence 1100 111 236999999999999999999999887655554432 123555554444455678999999999
Q ss_pred Eeec-CCC-eEEEeeCCEEccCce--EEEee------cCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeeccee-
Q psy11701 242 VFGA-PKP-EVNWIHNQKELTGGR--YTILE------TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI- 310 (745)
Q Consensus 242 ~~~~-p~~-~i~W~~~~~~~~~~~--~~~~~------~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~- 310 (745)
+.+. |.+ .+.|++++..+.... ..... ...|.|.++..+| |.|+|.|.|..|.......+.+...|.+
T Consensus 243 ~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~ 321 (523)
T 2rcj_C 243 VKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVF 321 (523)
T ss_pred EeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEE
Confidence 9886 766 899999987643211 01111 2379999999999 9999999999998777777776655554
Q ss_pred ecCCCcEE-EecCCeEEEEEEEEecCCC--CcEEEEeeCCeeccCCCCCeEEEcC------CeEEEEecCCCCCCEEEEE
Q psy11701 311 TDQPEDYE-VEAGQSATFRCNAVSDPSL--KLSIVWLRGSEPIDFESEPRFVQSN------DYSLTVTKSSELDSGQYTC 381 (745)
Q Consensus 311 ~~~p~~~~-~~~g~~~~l~C~~~~~~~~--~~~i~W~~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~~~g~y~c 381 (745)
...|.... +..|+.+.|.|.+.+.++. .+.+.|++++..+............ .+.|.|..+...|.|.|+|
T Consensus 322 ~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C 401 (523)
T 2rcj_C 322 LFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKC 401 (523)
T ss_pred ecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEE
Confidence 33343333 6789999999999987643 3699999999887643221111111 1357888888899999999
Q ss_pred EEEeCCceEEEEEEEE
Q psy11701 382 RAQTELDFIEAQATLT 397 (745)
Q Consensus 382 ~a~n~~g~~~~~~~l~ 397 (745)
.|.|..+.......+.
T Consensus 402 ~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 402 KVSNKALPAPIEKTIS 417 (523)
T ss_pred EEeCCCCCCceeEEEE
Confidence 9999877655444444
No 21
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.1e-39 Score=354.00 Aligned_cols=362 Identities=19% Similarity=0.224 Sum_probs=270.4
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEE-CCEecCCCCCeEeccCCcEEEEccCCCCCCE-EEEEEEEeCC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQG-SYTCEVSNGV 110 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~~~~~ 110 (745)
|..+ ..+.+..+.+|++++|.|.+.+.|.+.+.|++ ||..|..+.++.... .+.|.|.+++.+|+| .|+|.+.+..
T Consensus 115 ~~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~-~~~L~i~~~~~~d~G~~Y~C~a~n~~ 192 (524)
T 2ec8_A 115 AKLF-LVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDP-KAGIMIKSVKRAYHRLCLHCSVDQEG 192 (524)
T ss_dssp SCSB-CCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEET-TTEEEEESCCGGGTTCEEEEEEC---
T ss_pred Cccc-ccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECC-CccEEEeccchhhCCceEEEEEEECC
Confidence 3444 77888899999999999999987778999998 898888777776644 447999999999999 9999999876
Q ss_pred eeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeecCCCe-EEEEeCCEec--cCCCC----CCceeecC
Q psy11701 111 GEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGLPEPE-IHWVHNGKPI--SQAPP----NPRRKVGP 179 (745)
Q Consensus 111 g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~-v~W~~~g~~~--~~~~~----~~~~~~~~ 179 (745)
+...+..+.|.|. .+|.+...+....+.+|+++.|.|.+.+.|.+. +.|++++..+ ..... ........
T Consensus 193 ~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
T 2ec8_A 193 KSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQ 272 (524)
T ss_dssp -CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEE
T ss_pred ceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceE
Confidence 6655556888886 788998999988999999999999999988886 9999999874 21100 00012345
Q ss_pred ceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCC---ceEEecCceEEEEEEEeecCCCe-EEEeeC
Q psy11701 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK---DEYTVDGKTVVLTCRVFGAPKPE-VNWIHN 255 (745)
Q Consensus 180 ~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~---~~~v~~g~~~~l~C~~~~~p~~~-i~W~~~ 255 (745)
+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+. ...+.+|+.++|.|.+.+.|.+. +.|+++
T Consensus 273 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~ 351 (524)
T 2ec8_A 273 ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVD-KGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYM 351 (524)
T ss_dssp EEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEES-SCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESS
T ss_pred EEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEec-cCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEEC
Confidence 7899999999999999999999999988888999885 666665443 57889999999999999999998 999999
Q ss_pred CEEccCce--EEEee-------cCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEE
Q psy11701 256 QKELTGGR--YTILE-------TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326 (745)
Q Consensus 256 ~~~~~~~~--~~~~~-------~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~ 326 (745)
+..+.... +.... ...|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+. ...| .
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~---~~~g---~ 425 (524)
T 2ec8_A 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDR---LVNG---M 425 (524)
T ss_dssp SCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEEC---CSSS---C
T ss_pred CeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeeccc---CcCc---E
Confidence 98876442 33222 24799999999999999999999999999999999998887765443 2344 9
Q ss_pred EEEEEEecCCCCcEEEEeeCCeeccC-------CCC--CeEEEcCCeEEE----EecCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 327 FRCNAVSDPSLKLSIVWLRGSEPIDF-------ESE--PRFVQSNDYSLT----VTKSSELDSGQYTCRAQTELDFIEAQ 393 (745)
Q Consensus 327 l~C~~~~~~~~~~~i~W~~~~~~~~~-------~~~--~~~~~~~~~~l~----i~~~~~~~~g~y~c~a~n~~g~~~~~ 393 (745)
|.|.+.|.|. +.+.|++++..+.. ... ........+.+. +......|.|.|+|.|.|..|.....
T Consensus 426 l~C~~~g~P~--p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~ 503 (524)
T 2ec8_A 426 LQCVAAGFPE--PTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAY 503 (524)
T ss_dssp EEEEEEEESC--CEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECC
T ss_pred EEEEEEeecC--CEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEE
Confidence 9999999987 68999999765420 000 011122233333 33334589999999999999999888
Q ss_pred EEEEEeccCCCC
Q psy11701 394 ATLTVQVPLEAP 405 (745)
Q Consensus 394 ~~l~v~~pp~~P 405 (745)
+.|.|..++...
T Consensus 504 ~~l~V~e~~~~~ 515 (524)
T 2ec8_A 504 FNFAFKGNNKEQ 515 (524)
T ss_dssp CCCCC-------
T ss_pred EEEEEecCCHHH
Confidence 888887665443
No 22
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=363.79 Aligned_cols=534 Identities=16% Similarity=0.150 Sum_probs=346.8
Q ss_pred ecCceeEeeCCCeEEEEEEEe-------ecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 130 VEPEFINAAEEETVTFECKAS-------GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~-------~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
+.|.+..+.+|++++|.|.+. +.+.+.|.|++||+.+...... ......+.|+|.++...|++ |+|.+...
T Consensus 8 i~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~-~~~~~~~~l~i~~~~~~~~~-y~C~~~~~ 85 (589)
T 3l5h_A 8 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYT-IINRTASSVTFTDIASLNIQ-LTCNILTF 85 (589)
T ss_dssp CSCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCB-CCSSSCCBCCCCCCCSSCCC-CCCC-CCT
T ss_pred EecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHcc-ccCCcEeEEEEecCCCccee-eEEecccC
Confidence 457777899999999999997 5567899999999877643211 12223568999999988865 77887632
Q ss_pred CceEE---EEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEee-----------
Q psy11701 203 LGYVY---KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE----------- 268 (745)
Q Consensus 203 ~g~~~---~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~----------- 268 (745)
|... ..+.|.+. . ..+....|.|...+.....+.|...........|.+..
T Consensus 86 -~~~~~~~~~~~l~v~-~-------------pP~~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~ 150 (589)
T 3l5h_A 86 -GQLEQNVYGITIISG-L-------------PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCK 150 (589)
T ss_dssp -TCC-CCCCCCCCCC--C-------------CCCCCEEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCCEE
T ss_pred -CCcccEEEeEEEecc-C-------------CCCCCEeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCcccCC
Confidence 2211 11122221 1 13556678888877666778887743221112222210
Q ss_pred -----cCcEEEc-ccCCCCCEEEEEEEEeCCceEEE-EEEEEEeecceeecCCCcEEEe----cCCeEEEEEEEEec---
Q psy11701 269 -----TGDLKIT-DVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVE----AGQSATFRCNAVSD--- 334 (745)
Q Consensus 269 -----~~~l~i~-~~~~~d~G~Y~C~~~n~~g~~~~-~~~l~v~~~p~~~~~p~~~~~~----~g~~~~l~C~~~~~--- 334 (745)
.....+. ++.......|+|.|.|..|.... ...+.. .....+..|..+.+. ....+.|.|.....
T Consensus 151 ~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~-~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~ 229 (589)
T 3l5h_A 151 AKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP-VYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV 229 (589)
T ss_dssp CBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECG-GGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGT
T ss_pred CCCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEcc-ccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCe
Confidence 0122333 34444566788999999887422 222211 112234566666662 34578888875532
Q ss_pred CCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEE---EEEEEEeccC----CCCCC
Q psy11701 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA---QATLTVQVPL----EAPSN 407 (745)
Q Consensus 335 ~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~---~~~l~v~~pp----~~P~~ 407 (745)
+...+.++|...+..................+.+.++.....+.|++.|.|..|.+.. +..+.+..++ .+|..
T Consensus 230 ~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~ 309 (589)
T 3l5h_A 230 IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSF 309 (589)
T ss_dssp SCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCE
T ss_pred eeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcE
Confidence 2223666776554221110000000112357889999999999999999998875422 2333333332 45543
Q ss_pred ceeE---EeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEec
Q psy11701 408 FTLI---QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484 (745)
Q Consensus 408 ~~~~---~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n 484 (745)
+... ...+.+++.|.|+++++...+|.+.+|.|.|+....... . . ......+ ..|.+++.|.|+|.|.|
T Consensus 310 ~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~~~---~--~-~~~~~~~--~~l~~~~~Y~~~V~A~n 381 (589)
T 3l5h_A 310 WYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ---N--Y-TVNATKL--TVNLTNDRYLATLTVRN 381 (589)
T ss_dssp EEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSCCC---B--C-CCSSSCC--EECCCSSCCCEEEEEEB
T ss_pred EEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCCce---e--e-ccCCceE--EEEeCCCCEEEEEEEEe
Confidence 3322 114678999999987778889999999998866544221 1 1 2223333 34889999999999999
Q ss_pred CCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCc
Q psy11701 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564 (745)
Q Consensus 485 ~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (745)
..|.|+++..........+|.+|.++.+... .+++.|+|++|.. .+.+|.|+|+..+........+.. +.....
T Consensus 382 ~~G~~~~s~~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~---~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~ 455 (589)
T 3l5h_A 382 LVGKSDAAVLTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE---SVKKYILEWCVLSDKAPCITDWQQ--EDGTVH 455 (589)
T ss_dssp TTBCCCCCCCCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS---CCSCBCCEEEEECSSSCCCEEECC--BCSSCC
T ss_pred CCccCCCeEEEeecccccCCCCcceEEEEEC-CCeEEEEEECCCC---CccEEEEEEEECCCCCCCccCcEE--eeCCcc
Confidence 9999998864433322234566778888775 6899999999864 799999999987654321111111 224455
Q ss_pred ceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCC---CCCCCCCCCCcceeEEEeecCccccCCCcceEEEEE
Q psy11701 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP---DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641 (745)
Q Consensus 565 ~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~---~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~ 641 (745)
..+++.+|.|++.|.|+|.|.|..|.|.++..........| +.+.+.....+++.|+|++++....+|.|.+|.|+|
T Consensus 456 ~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~~~~t~~~~P~~pp~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~ 535 (589)
T 3l5h_A 456 RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFY 535 (589)
T ss_dssp EEECCSCCCSSSEEEEEECBEETTEECCCEEEEEESSCCCCSSCCCCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECC
T ss_pred eEEehhccccCcEEEEEEEEEeCCcccCCEEEEEEeccCCCCCCCeEEEeecccceEEEEecCCCHHHcCccceeEEEEE
Confidence 67788999999999999999999999998654433322222 233334456789999999887788999999999999
Q ss_pred eccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEE
Q psy11701 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 721 (745)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A 721 (745)
+..++.. + ....++..+.+.|.+|.|++.|.|+|+|
T Consensus 536 ~~~~~~~-~-------------------------------------------~~~~~~~~~~~~~~~L~p~t~Y~~~V~A 571 (589)
T 3l5h_A 536 RTIIGNE-T-------------------------------------------AVNVDSSHTEYTLSSLTSDTLYMVRMAA 571 (589)
T ss_dssp BCSSCCC-C-------------------------------------------CEEECTTCCBCCBCSCCSSCCEECCEEE
T ss_pred EeCCCCe-E-------------------------------------------EEEeCCcccEEEecCCCCCCEEEEEEEE
Confidence 8653211 0 0112467888999999999999999999
Q ss_pred ecCcccCCCCcceEEeCCC
Q psy11701 722 FNGAYNGPPSEIISFVTPE 740 (745)
Q Consensus 722 ~~~~G~g~~s~~~~~~t~~ 740 (745)
.|.+| |++|+++.|+|+.
T Consensus 572 ~n~~G-~~~S~~~~~~T~k 589 (589)
T 3l5h_A 572 YTDEG-GKDGPEFTFTTPK 589 (589)
T ss_dssp EETTE-EEECCCCEECCCC
T ss_pred EeCCC-CCCCCCeEEecCC
Confidence 99999 9999999999963
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=336.98 Aligned_cols=341 Identities=16% Similarity=0.141 Sum_probs=239.8
Q ss_pred eeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEE
Q psy11701 43 EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV 122 (745)
Q Consensus 43 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V 122 (745)
.....|+.++|.|.+.|.|.|.|.|++++..+....... ..........++.+|+|.|+|.|.|..|...+..+.|.|
T Consensus 149 ~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (527)
T 3qs9_E 149 YFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEES--PAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL 226 (527)
T ss_dssp EEEECSSSSCEEEEEEESSCCEEEEEEC---------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred cEEecCCceEEEEEEceecCCeEEEEECCCCCccccccC--CcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEE
Confidence 345678889999999999999999999887764221111 111112233456899999999999999988766688888
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCC-------CceeecCceEEEccCCCCCCEE
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPN-------PRRKVGPNRITIENLRKSDTGN 194 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~-------~~~~~~~~~L~i~~v~~~d~G~ 194 (745)
..+|.+ .|....+.+|+++.|.|.+. +.|.+.++|+|+|..+...... .......+.|.|.+++.+|+|.
T Consensus 227 ~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 304 (527)
T 3qs9_E 227 NQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGY 304 (527)
T ss_dssp SSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEE
T ss_pred eccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeE
Confidence 887766 66788899999999999996 8899999999999877532111 0112233569999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCCeeeeCC--CceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcE
Q psy11701 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDL 272 (745)
Q Consensus 195 Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~--~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l 272 (745)
|+|.|.|. ....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+..........+.|
T Consensus 305 Y~C~a~N~---~~~~~~L~V~~-~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L 380 (527)
T 3qs9_E 305 YTCSSSKH---PSQSALVTIVE-KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSI 380 (527)
T ss_dssp EEEEETTE---EEEEEEEEEC---CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEE
T ss_pred EEEEEEeC---CCceEEEEEEc-cCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEE
Confidence 99999987 56677888875 55555444 33567789999999999999999999999999886443223345689
Q ss_pred EEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccC
Q psy11701 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352 (745)
Q Consensus 273 ~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~ 352 (745)
.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+. ...|.|.+.|.|. +.+.|++++.....
T Consensus 381 ~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~--------~~~l~C~a~g~P~--p~i~W~~~~~~~~~ 450 (527)
T 3qs9_E 381 SKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEAS--------ASQASCFSDGYPL--PSWTWKKCSDKSPN 450 (527)
T ss_dssp EEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCC--------CE---EEEECSSC--CEEEEECCC-----
T ss_pred EEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCC--------CCEEEEEEEEEcC--CeEEEEECCCCcCC
Confidence 9999999999999999999999999999999998887765542 2357999999987 68999987654311
Q ss_pred CCC-----------CeEEEcC-CeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 353 ESE-----------PRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 353 ~~~-----------~~~~~~~-~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
... ....... ...+.+......|.|.|+|.|.|..|.....+.|.+..|
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p 511 (527)
T 3qs9_E 451 CTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGP 511 (527)
T ss_dssp CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC-----
T ss_pred CccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCC
Confidence 000 0000111 112333333456999999999999999999888866543
No 24
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=6.3e-36 Score=311.67 Aligned_cols=360 Identities=19% Similarity=0.246 Sum_probs=270.4
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEeccCCCC--CCceee----cCceEEEccCCCCCCEEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPISQAPP--NPRRKV----GPNRITIENLRKSDTGNYG 196 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~~~~~--~~~~~~----~~~~L~i~~v~~~d~G~Y~ 196 (745)
+|.+.. +.+..+.+|+++.|.|.+.|.|.+.++|+|+ |..+..... ..+... ..+.|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 356655 5667788999999999999999999999999 888864321 223322 3468999999999999999
Q ss_pred EEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc---eEEEeec---C
Q psy11701 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILET---G 270 (745)
Q Consensus 197 C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~---~~~~~~~---~ 270 (745)
|.|.|..|.....+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ++..... .
T Consensus 80 C~a~n~~g~~~~~~~l~V~~-~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 158 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEY-APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKM 158 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEE-EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCE
T ss_pred EEEEeCCCCcceEEEEEEEe-CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEE
Confidence 99999999988889999985 777776666667889999999999999999999999999988643 3444333 3
Q ss_pred cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEE--ecCCeEEEEEEEEec----CCCCcEEEEe
Q psy11701 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV--EAGQSATFRCNAVSD----PSLKLSIVWL 344 (745)
Q Consensus 271 ~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~--~~g~~~~l~C~~~~~----~~~~~~i~W~ 344 (745)
.|.|.++...|.|.|+|.|.|..|.....+.+.+...| ..|....+ ..+..+.|.|..... +...+.+.|.
T Consensus 159 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P---~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~ 235 (389)
T 2jll_A 159 ILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVP---SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVK 235 (389)
T ss_dssp EEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCC---CCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCC---CCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEE
Confidence 69999999999999999999999998888888876654 23323322 345789999975322 2223578888
Q ss_pred eCCeeccCCCCCeEEE-cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEec----cCCCCCCceeEEeecCcee
Q psy11701 345 RGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV----PLEAPSNFTLIQVIDAKKA 419 (745)
Q Consensus 345 ~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~----pp~~P~~~~~~~~~~~~~v 419 (745)
+.+.... ..... .....+.|.++...+.|.|+|.|.|..|.+..+..+.+.. +|.+| .+.... .+.+++
T Consensus 236 ~~~~~~~----~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p-~~~~~~-~~~~~v 309 (389)
T 2jll_A 236 EVASEIW----KIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQP-SSGKSF 309 (389)
T ss_dssp ETTCSCC----EEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-CEEEEE-ETTTEE
T ss_pred ECCCccc----EEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-cccccc-CcCCEE
Confidence 8764322 11111 2335799999999999999999999999766554444443 56666 455555 688999
Q ss_pred EEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeC
Q psy11701 420 VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499 (745)
Q Consensus 420 ~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t 499 (745)
.|+|.++ .+.++++.+|.|+|+......+. ....+ ......++|.+|.+++.|.|+|+|.|..|.|++|.. .++|
T Consensus 310 ~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~-~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T 384 (389)
T 2jll_A 310 KLSITKQ--DDGGAPILEYIVKYRSKDKEDQW-LEKKV-QGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSM 384 (389)
T ss_dssp EEEECCC--CCCSSCCCEEEEEEEC-----CC-BCCEE-CTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEEC
T ss_pred EEEEECC--CCCCCcccEEEEEEEeCCCCcce-eEeec-cCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecC
Confidence 9999974 45678899999999875443222 12334 556778999999999999999999999999999864 6776
Q ss_pred C
Q psy11701 500 P 500 (745)
Q Consensus 500 ~ 500 (745)
.
T Consensus 385 ~ 385 (389)
T 2jll_A 385 P 385 (389)
T ss_dssp C
T ss_pred C
Confidence 4
No 25
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3e-37 Score=328.11 Aligned_cols=408 Identities=13% Similarity=0.131 Sum_probs=280.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCee-----EEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQT-----IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v-----~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
+.+.|++..+.+|++++|.|.+.| |.|.+ .|+|++..+.. .+ ...|.|.+++. |+| |+|.+.+..
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~-~~------~~~l~i~~v~~-d~g-Y~C~a~~~~ 71 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG-NN------RKVYELSNVQE-DSQ-PMCYSNCPD 71 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST-TT------EEEEEEEEECS-CBC-CEEEEEETT
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC-CC------ceEEEEEeccc-CCe-eEEEEeCCC
Confidence 456788999999999999999998 88888 89998875542 22 23799999987 999 999997654
Q ss_pred eeeEEEEEEEEEEecCeEE-ecCceeEeeCCCeEEEEEEEeecCCC---eEEEEeCCEeccCCCCCCceeecCceEEEcc
Q psy11701 111 GEAKSYSIDLSVLAAPYFT-VEPEFINAAEEETVTFECKASGLPEP---EIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~-~~~~~~~v~~G~~~~l~C~~~~~p~~---~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~ 186 (745)
+. .+..+.|.|..+|.+. ..+....+.+|+++.|.|.+.+.|++ .++|+|+|..+....... ...++.|.|.+
T Consensus 72 ~~-~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~--~~~~~~L~i~~ 148 (450)
T 1z7z_I 72 GQ-STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG--EPAEVTTTVLV 148 (450)
T ss_dssp EE-EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT--TTEEEEEEEEC
T ss_pred Cc-ceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc--cccceEEEEEe
Confidence 44 4477889998888776 56777889999999999999998887 899999999886432111 11235899999
Q ss_pred CCCCCCEEEEEEEEeCCceEE--------EEEEEEEeec---CCeeeeCCCceEEecCceEEEEEEEeec-C--CCeEEE
Q psy11701 187 LRKSDTGNYGCNATNSLGYVY--------KDVYVNVLAH---APEITEAPKDEYTVDGKTVVLTCRVFGA-P--KPEVNW 252 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~--------~~~~l~v~~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p--~~~i~W 252 (745)
+..+|+|.|+|.|.|..|... ....+.|... +|.+.. ...+.+|+.++|.|.+.+. | .+.+.|
T Consensus 149 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W 225 (450)
T 1z7z_I 149 RRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHL 225 (450)
T ss_dssp CSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEE
T ss_pred eccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEE
Confidence 999999999999999866321 2234444422 232221 1678899999999999998 6 679999
Q ss_pred eeCCEEccCceEEEeecCcEEEc---ccCCCCCE--EEEEEEEeCCceEEEEEEEEEee--cceeecCCCcEEEecCCeE
Q psy11701 253 IHNQKELTGGRYTILETGDLKIT---DVAFADSG--EYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSA 325 (745)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~i~---~~~~~d~G--~Y~C~~~n~~g~~~~~~~l~v~~--~p~~~~~p~~~~~~~g~~~ 325 (745)
++++..+.. +..... ..+.+. +++..|+| .|+|.+.|..|.......|.|.. +|.+... ...+..|+.+
T Consensus 226 ~~~~~~~~~-~~~~~~-~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~--~~~v~~G~~v 301 (450)
T 1z7z_I 226 ALGDQRLNP-TVTYGN-DSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILT--KPEVSEGTEV 301 (450)
T ss_dssp EETTEECCC-EEEEET-TEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEES--CSEEETTCEE
T ss_pred eCCCEeCCc-eEEecC-CceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecC--CeeEeCCCcE
Confidence 999988865 332222 222222 67889999 99999999999988888888876 4444332 3478899999
Q ss_pred EEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCc-e---EEEEEEEEEecc
Q psy11701 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD-F---IEAQATLTVQVP 401 (745)
Q Consensus 326 ~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g-~---~~~~~~l~v~~p 401 (745)
.|.|.+. | .+.+.| ++..+.. ......|.|..+...|.|.|+|.|.|..+ . ....+.|.|..+
T Consensus 302 ~l~C~~~--p--~p~i~W--~g~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~ 368 (450)
T 1z7z_I 302 TVKCEAH--P--RAKVTL--NGVPAQP-------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG 368 (450)
T ss_dssp EEEEEC-----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEE
T ss_pred EEEEecC--C--CCEeEE--CCEEcCC-------CCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecC
Confidence 9999997 4 378899 6655521 11234789999999999999999997655 3 336677788766
Q ss_pred CCCCCCc--eeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEE
Q psy11701 402 LEAPSNF--TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479 (745)
Q Consensus 402 p~~P~~~--~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~ 479 (745)
|...... ....+..+..+.|.|.....+. -.| .|.+++. ..+ .. ...+ .+...+...|+
T Consensus 369 P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~-------p~i-~W~~~g~------~~~-~~-g~~~---~v~~~d~G~Y~ 429 (450)
T 1z7z_I 369 PRLDERDCPGNWTWPENSQQTPMCQAWGNPL-------PEL-KCLKDGT------FPL-PI-GESV---TVTRDLEGTYL 429 (450)
T ss_dssp EECCSTTSCSEEEEETTCEECCCCCCEEESC-------CEE-EEEETTT------EEC-CT-TSCE---ECCGGGCEEEE
T ss_pred CceeeccCCCceeEcCCCeEEEEEecccCCC-------CcE-EEEECCc------ccC-CC-CCeE---eEehhhCeEEE
Confidence 6443222 1112256778888886521111 123 3444332 111 11 1122 46667888999
Q ss_pred EEEecCCCCCCCCcce
Q psy11701 480 VLAFNGAYNGPPSEII 495 (745)
Q Consensus 480 V~a~n~~G~g~~S~~~ 495 (745)
|.|.|..|....+..+
T Consensus 430 C~a~N~~G~~~~~~~l 445 (450)
T 1z7z_I 430 CRARSTQGEVTREVTV 445 (450)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEEEeCCCceeEEEEE
Confidence 9999998876444333
No 26
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.1e-35 Score=327.48 Aligned_cols=358 Identities=21% Similarity=0.282 Sum_probs=268.0
Q ss_pred eeEeeccceeEecCCcEEEEEEEeec-CCCeeEEEECCEecC----C---------CCCeEeccCCc-----EEEEccCC
Q psy11701 35 QQYVTRKKEVALRNKKVELFCIFGGT-PLPQTIWSKDGVPIN----P---------SDRISQGNYGK-----SLIIKHVE 95 (745)
Q Consensus 35 ~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~i~----~---------~~~~~~~~~~~-----~L~i~~~~ 95 (745)
.+...+....+.+|++++|.|.+.+. |.+.+.|+|++..+. . ..++.+...+. +|.|.+++
T Consensus 114 ~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 193 (585)
T 2ocw_A 114 GLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLR 193 (585)
T ss_pred cccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCC
Confidence 34567888899999999999999865 456899999875421 0 24444433332 79999999
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCC---CeEEEE-eCCEe---ccC
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE---PEIHWV-HNGKP---ISQ 168 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~---~~v~W~-~~g~~---~~~ 168 (745)
.+|+|.|+|.|.+..|... ..+.|.|..+| |....+.+|+.+.|.|.+.+ +. +.+.|+ ++|.. +..
T Consensus 194 ~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~-----p~~~~~~~G~~v~l~C~~~~-~~~~~~~~~w~~~~g~~~~~~~~ 266 (585)
T 2ocw_A 194 LSDAGQYLCQAGDDSNSNK-KNADLQVLKPE-----PELVYEDLRGSVTFHCALGP-EVANVAKFLCRQSSGENCDVVVN 266 (585)
T ss_pred hhHCeEEEEEeccCCcccc-ceEEEEEccCC-----CceeEEcCCCcEEEEEEcCC-CCCCceEEEEEeCCCCCcceEEe
Confidence 9999999999998877654 66888887644 45566789999999999743 33 688997 88842 111
Q ss_pred CC------CCCceeec----Cc--eEEEccCCCCCCEEEEEEEEeCCceEE-----EEEEEEEeecCCeeeeCCCceEEe
Q psy11701 169 AP------PNPRRKVG----PN--RITIENLRKSDTGNYGCNATNSLGYVY-----KDVYVNVLAHAPEITEAPKDEYTV 231 (745)
Q Consensus 169 ~~------~~~~~~~~----~~--~L~i~~v~~~d~G~Y~C~~~~~~g~~~-----~~~~l~v~~~~p~~~~~~~~~~v~ 231 (745)
.. ...+.... ++ .|.|.+++.+|+|.|+|.|.|. |... ..+.|.|.. +|.+...+....+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~ 344 (585)
T 2ocw_A 267 TLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNE-ESTIPRSPTVVKGV 344 (585)
T ss_pred CCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEec-ccccccCCcceEEE
Confidence 10 11222221 33 7999999999999999999995 4433 667788874 77787788888899
Q ss_pred cCceEEEEEEEeecCCCeE----EEee--CCE--Ecc----------CceEEEe---ecCc--EEEcccCCCCCEEEEEE
Q psy11701 232 DGKTVVLTCRVFGAPKPEV----NWIH--NQK--ELT----------GGRYTIL---ETGD--LKITDVAFADSGEYTCF 288 (745)
Q Consensus 232 ~g~~~~l~C~~~~~p~~~i----~W~~--~~~--~~~----------~~~~~~~---~~~~--l~i~~~~~~d~G~Y~C~ 288 (745)
+|+.++|.|.+.+.|.+.+ .|++ ++. .+. ..++.+. ..+. |.|.+++.+|+|.|+|.
T Consensus 345 ~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 424 (585)
T 2ocw_A 345 AGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL 424 (585)
T ss_pred eCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEc
Confidence 9999999999999988866 7999 776 332 2344443 2333 99999999999999999
Q ss_pred EEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecC--CCCcEEEEeeCCeeccCCCCC----eEEE-c
Q psy11701 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP--SLKLSIVWLRGSEPIDFESEP----RFVQ-S 361 (745)
Q Consensus 289 ~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~--~~~~~i~W~~~~~~~~~~~~~----~~~~-~ 361 (745)
| |..|.....+.|.|...+.....|....+..|+.+.|.|.+.+.+ .+.+.+.|++++..+...... .+.. .
T Consensus 425 a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 503 (585)
T 2ocw_A 425 T-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCD 503 (585)
T ss_pred c-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEec
Confidence 9 888888888899998755444557778889999999999997432 234789999999876432211 1222 1
Q ss_pred ---CCeEEEEecCCCCCCEEEEEEEEeCCceEEEE-EEEEEeccC
Q psy11701 362 ---NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ-ATLTVQVPL 402 (745)
Q Consensus 362 ---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~-~~l~v~~pp 402 (745)
....|.|..+...|.|.|+|.|.|..|..... +.|.|..+|
T Consensus 504 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 504 ENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 12589999999999999999999999866544 888888776
No 27
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.9e-36 Score=320.57 Aligned_cols=337 Identities=14% Similarity=0.207 Sum_probs=247.6
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCC---eeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEe
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLP---QTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
+|..+...+.+..+.+|++++|.|.+.|.|.+ .|+|+|+|.+|....... ......|.|.+++.+|+|.|+|.|.|
T Consensus 85 ~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n 163 (450)
T 1z7z_I 85 TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG-EPAEVTTTVLVRRDHHGANFSCRTEL 163 (450)
T ss_dssp CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT-TTEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc-cccceEEEEEeeccccCceEEEEEEc
Confidence 57777788888999999999999999998887 899999999886433221 22235899999999999999999998
Q ss_pred CCeee-------EEEEEEEEEEec----CeEEecCceeEeeCCCeEEEEEEEeec-C--CCeEEEEeCCEeccCCCCCCc
Q psy11701 109 GVGEA-------KSYSIDLSVLAA----PYFTVEPEFINAAEEETVTFECKASGL-P--EPEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 109 ~~g~~-------~~~~~~l~V~~~----p~~~~~~~~~~v~~G~~~~l~C~~~~~-p--~~~v~W~~~g~~~~~~~~~~~ 174 (745)
..|.. .+....|.|... |.+.. ...+.+|+.+.|.|.+.|. | .+.+.|+++|..+.. .
T Consensus 164 ~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~-----~ 235 (450)
T 1z7z_I 164 DLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-----T 235 (450)
T ss_dssp ECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC-----E
T ss_pred ccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc-----e
Confidence 75531 112344555433 22221 1578999999999999997 7 689999999998864 2
Q ss_pred eeecCceEEEc---cCCCCCCE--EEEEEEEeCCceEEEEEEEEEeec-CCeeeeCCCceEEecCceEEEEEEEeecCCC
Q psy11701 175 RKVGPNRITIE---NLRKSDTG--NYGCNATNSLGYVYKDVYVNVLAH-APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 175 ~~~~~~~L~i~---~v~~~d~G--~Y~C~~~~~~g~~~~~~~l~v~~~-~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
.......+.+. +++.+|+| .|+|.+.|..|.....+.|.|... +|.+... ...+.+|+.++|.|.+. |.+
T Consensus 236 ~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~--~~~v~~G~~v~l~C~~~--p~p 311 (450)
T 1z7z_I 236 VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILT--KPEVSEGTEVTVKCEAH--PRA 311 (450)
T ss_dssp EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEES--CSEEETTCEEEEEEEC------
T ss_pred EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecC--CeeEeCCCcEEEEEecC--CCC
Confidence 22222233322 78999999 999999999998888888888753 3444433 45888999999999997 788
Q ss_pred eEEEeeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCc-e---EEEEEEEEEeecceeecCC--CcEEEecC
Q psy11701 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLG-T---AQGSGSLTVKEHTHITDQP--EDYEVEAG 322 (745)
Q Consensus 249 ~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g-~---~~~~~~l~v~~~p~~~~~p--~~~~~~~g 322 (745)
.+.| +|..+... .....|.|.++..+|+|.|+|.|.|..+ . ....+.|.|..+|.+...+ ....+..|
T Consensus 312 ~i~W--~g~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g 385 (450)
T 1z7z_I 312 KVTL--NGVPAQPL----GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPEN 385 (450)
T ss_dssp ------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETT
T ss_pred EeEE--CCEEcCCC----CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCC
Confidence 9999 66655211 1234799999999999999999997655 3 3477888998888876654 66788999
Q ss_pred CeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 323 ~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
+.+.|.|.+.|.|. +.+.|++++..+... ...+ .+...|.|.|+|.|.|..|.....+.|.|..|
T Consensus 386 ~~~~l~C~~~g~P~--p~i~W~~~g~~~~~~---------g~~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 386 SQQTPMCQAWGNPL--PELKCLKDGTFPLPI---------GESV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp CEECCCCCCEEESC--CEEEEEETTTEECCT---------TSCE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CeEEEEEecccCCC--CcEEEEECCcccCCC---------CCeE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 99999999999987 689999998743211 1112 47779999999999999999999999988643
No 28
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3.4e-35 Score=291.62 Aligned_cols=272 Identities=28% Similarity=0.448 Sum_probs=232.0
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEe--ccCCcEEEEccCCCCCCEEEEEEEEeC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--GNYGKSLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
+|+.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+....++.. .....+|.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 477788899999999999999999999999999999999999987766543 344568999999999999999999998
Q ss_pred CeeeEEEEEEEEEEecCeEEecCc-eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce-eecCceEEEccC
Q psy11701 110 VGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-KVGPNRITIENL 187 (745)
Q Consensus 110 ~g~~~~~~~~l~V~~~p~~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~-~~~~~~L~i~~v 187 (745)
.|... ..+.|.|..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+......... ......|.|.++
T Consensus 84 ~g~~~-~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 162 (284)
T 2rik_A 84 AGKDS-CSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNL 162 (284)
T ss_dssp TEEEE-EEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSC
T ss_pred CceEE-EEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCC
Confidence 88754 778999999998876644 556899999999999999999999999999988754321111 123467999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEE
Q psy11701 188 RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTI 266 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~ 266 (745)
+.+|+|.|+|.+.|..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .++..
T Consensus 163 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~ 241 (284)
T 2rik_A 163 SVEDSGDYTCEAHNAAGSASSSTSLKVKE-PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKI 241 (284)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEEC-CCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEE
T ss_pred CcccCEEEEEEEEcCCCceeEEEEEEEec-CCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEE
Confidence 99999999999999999988888898875 78888888888899999999999999999999999999988753 34444
Q ss_pred eec---CcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 267 LET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 267 ~~~---~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
... ..|.|.++..+|.|.|+|.|.|..|.....+.|.|+
T Consensus 242 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 242 MSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 443 379999999999999999999999999888888875
No 29
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=325.24 Aligned_cols=351 Identities=16% Similarity=0.249 Sum_probs=245.1
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCC--eeEEEECCEecCCCCCeE---eccCC-----cEEEEccCCCCCCEEEE
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLP--QTIWSKDGVPINPSDRIS---QGNYG-----KSLIIKHVEFSDQGSYT 103 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~i~~~~~~~---~~~~~-----~~L~i~~~~~~d~G~Y~ 103 (745)
+.+.+.+....+.+|++++|.|.+.|.|++ .|+|+|||.+|..+.+.. ....+ +.|.|.+++.+|+|.|+
T Consensus 115 P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 194 (523)
T 2rcj_C 115 PTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYS 194 (523)
T ss_pred CeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEE
Confidence 344466666778899999999999988654 999999999887543321 11111 36999999999999999
Q ss_pred EEEEeCCeeeEEEEEEEE----EEecCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCEeccCCCCCCceee
Q psy11701 104 CEVSNGVGEAKSYSIDLS----VLAAPYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGKPISQAPPNPRRKV 177 (745)
Q Consensus 104 C~~~~~~g~~~~~~~~l~----V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~~~~~~~~~~~~~~ 177 (745)
|.|.+..+... ..+.+. +..+|.+...+....+.+|+.+.|.|.+.|. |.+ .++|+|+|..+..... .....
T Consensus 195 C~a~n~~~~~~-~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~-~~~~~ 272 (523)
T 2rcj_C 195 CQVTHEGSTVE-KTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTF-PAVLQ 272 (523)
T ss_pred EEEEecCcccc-cceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeC-CcEec
Confidence 99999876544 333332 2346666544444567899999999999885 777 8999999987542111 11111
Q ss_pred c------CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceE-EecCceEEEEEEEeecCC---
Q psy11701 178 G------PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPK--- 247 (745)
Q Consensus 178 ~------~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~-v~~g~~~~l~C~~~~~p~--- 247 (745)
. .+.|.|.++..+| |.|+|.|.|..|.......|.+...|..+...|.... +.+|+.++|.|.+.+.++
T Consensus 273 ~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~ 351 (523)
T 2rcj_C 273 SSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDP 351 (523)
T ss_pred CCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCC
Confidence 1 3489999999999 9999999999998777777766543333344454444 788999999999998653
Q ss_pred -CeEEEeeCCEEccCceE---EEe------ecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEE----EeecceeecC
Q psy11701 248 -PEVNWIHNQKELTGGRY---TIL------ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT----VKEHTHITDQ 313 (745)
Q Consensus 248 -~~i~W~~~~~~~~~~~~---~~~------~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~----v~~~p~~~~~ 313 (745)
+.|.|++++..+..... ... ..+.|.|.++..+|+|.|+|.|.|..+.......+. +..+|.+...
T Consensus 352 ~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~ 431 (523)
T 2rcj_C 352 QVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTL 431 (523)
T ss_pred ceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEe
Confidence 48999999988753321 111 123588999999999999999999877654444444 3445554433
Q ss_pred CCc-EEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCe------EEEEecCCCCCCEEEEEEEEeC
Q psy11701 314 PED-YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY------SLTVTKSSELDSGQYTCRAQTE 386 (745)
Q Consensus 314 p~~-~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~------~l~i~~~~~~~~g~y~c~a~n~ 386 (745)
+.. ..+. +..+.|.|.+.+.+++.+.+.|++++..+............++ .|.+......|.|.|+|.|.|.
T Consensus 432 ~~~~~~~~-~~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~ 510 (523)
T 2rcj_C 432 PPSREEMT-KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHE 510 (523)
T ss_pred CCChHHcc-CCceEEEEEEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcC
Confidence 322 2233 4459999999998776679999999988763222222223333 2444444456799999999987
Q ss_pred Cc
Q psy11701 387 LD 388 (745)
Q Consensus 387 ~g 388 (745)
..
T Consensus 511 ~l 512 (523)
T 2rcj_C 511 AL 512 (523)
T ss_pred Cc
Confidence 64
No 30
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=7e-37 Score=315.02 Aligned_cols=311 Identities=15% Similarity=0.211 Sum_probs=242.1
Q ss_pred ceeEecCCcEEEEEEEeecCCCeeEEEECCEec--------------CCCCCeEec-----cCCcEEEEccCCCCCCEEE
Q psy11701 42 KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI--------------NPSDRISQG-----NYGKSLIIKHVEFSDQGSY 102 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i--------------~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y 102 (745)
.+.+.+|++++|.|.+.+.|.+.+.|+|++..+ ....|+.+. ....+|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 357899999999999998999999999998531 112344432 2456899999999999999
Q ss_pred EEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceE
Q psy11701 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182 (745)
Q Consensus 103 ~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L 182 (745)
+|.+.+.. ..+.|.|.. +...|. ..+.+|+++.|.|.+.+.|.+.+.|+++|..+ ......|
T Consensus 83 ~C~~~n~~-----~~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~---------~~~~~~L 144 (363)
T 1wio_A 83 ICEVEDQK-----EEVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN---------IQGGKTL 144 (363)
T ss_dssp EEEETTEE-----EEEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCE---------EEESSEE
T ss_pred EEEEEECC-----CcEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc---------cccceEE
Confidence 99997653 246666664 333343 46889999999999988899999999987543 2356799
Q ss_pred EEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEee-----cCCCeEEEeeCCE
Q psy11701 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG-----APKPEVNWIHNQK 257 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-----~p~~~i~W~~~~~ 257 (745)
.|.+++.+|+|.|+|.|.|..+.....+.+.|.. +|.. +....+.+|+.++|.|.+.+ .|.+.+.|++++.
T Consensus 145 ~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~-~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~ 220 (363)
T 1wio_A 145 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA-FQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERA 220 (363)
T ss_dssp EECSBCGGGCEECEEEEEETTEEEEECCEECEEC-CSCS---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSC
T ss_pred EEeeCChhcCCEEEEEEecCCCeEEEEEEEEEec-CCCC---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCC
Confidence 9999999999999999999877777767777764 3332 24556889999999998877 6778999999987
Q ss_pred EccC---------ceEEEe-----------e--cCcEEEcccCCCCCEEEEEEEEeC--CceEEEEEEEEEeecceeecC
Q psy11701 258 ELTG---------GRYTIL-----------E--TGDLKITDVAFADSGEYTCFARNK--LGTAQGSGSLTVKEHTHITDQ 313 (745)
Q Consensus 258 ~~~~---------~~~~~~-----------~--~~~l~i~~~~~~d~G~Y~C~~~n~--~g~~~~~~~l~v~~~p~~~~~ 313 (745)
.+.. .++.+. . ...|.|.++..+|+|.|+|.|.|. .|.....+.|.|..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~------- 293 (363)
T 1wio_A 221 SSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR------- 293 (363)
T ss_dssp CCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE-------
T ss_pred CccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE-------
Confidence 7643 333332 2 238999999999999999999999 89888888888872
Q ss_pred CCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393 (745)
Q Consensus 314 p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~ 393 (745)
..|+.+.|.|.+.+.|.+...+.|++++..+.. ...|.|..+...|.|.|+|.|.|. |....+
T Consensus 294 ------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~----------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~ 356 (363)
T 1wio_A 294 ------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV----------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLE 356 (363)
T ss_dssp ------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE----------EESSSEEEESSCCSEEEEEEECSS-SSCCEE
T ss_pred ------ecCCCeeEEEEEccccCCCccEEEEeCCCceee----------eeeeeeeeeccccceeEEEEEecC-CeEEEe
Confidence 128889999999999876667999999876642 234677889999999999999964 444445
Q ss_pred EEEEE
Q psy11701 394 ATLTV 398 (745)
Q Consensus 394 ~~l~v 398 (745)
..+.|
T Consensus 357 ~~~~V 361 (363)
T 1wio_A 357 SNIKV 361 (363)
T ss_dssp EEEEE
T ss_pred cceEe
Confidence 44444
No 31
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=7.6e-37 Score=324.04 Aligned_cols=359 Identities=18% Similarity=0.240 Sum_probs=247.6
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCC----CeeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPL----PQTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVE 95 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~----~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~ 95 (745)
+...|..+.+.+|++++|.|.+.+.|. +.+.|+|++ ..+ ....++.... ...+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 445588889999999999999988876 489999963 322 1134555432 23489999999
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEeccCCC
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPISQAP 170 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~~~~~ 170 (745)
.+|+|.|+|.|.+..+......+.|.|.. +|.+...+......+|+.+.|.|.+.+ .|.+ .++|+|+|..+....
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 163 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 163 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCc
Confidence 99999999999987654333445666653 676666544444457889999999987 6777 999999999886441
Q ss_pred -C-------CCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE
Q psy11701 171 -P-------NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242 (745)
Q Consensus 171 -~-------~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~ 242 (745)
. ........+.|.|.++..+|+|.|+|.|.|..+.......+.+.. ++.....+....+.+|+.++|.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~G~~v~L~C~~ 242 (438)
T 1qgc_4 164 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE-CEVMLVESGGGLVKPGGSLKLSCTA 242 (438)
T ss_dssp EEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC--CCEEEEECCEEECTTCCEEEEEEE
T ss_pred eeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccccccc-ceeEEecCCceEEecCCcEEEEEEE
Confidence 0 001111235799999999999999999999887653333333221 2233344567788999999999999
Q ss_pred eecC--CCeEEEeeC--CEEcc------------------CceEEEeec-----CcEEEcccCCCCCEEEEEEEEeCCc-
Q psy11701 243 FGAP--KPEVNWIHN--QKELT------------------GGRYTILET-----GDLKITDVAFADSGEYTCFARNKLG- 294 (745)
Q Consensus 243 ~~~p--~~~i~W~~~--~~~~~------------------~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~n~~g- 294 (745)
.+.| .+.+.|+++ +..+. .+++....+ ..|.|.+++.+|+|.|+|.|.|..+
T Consensus 243 ~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 322 (438)
T 1qgc_4 243 SGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGD 322 (438)
T ss_dssp ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSC
T ss_pred cccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCC
Confidence 9988 568999986 43221 345554432 2799999999999999999998443
Q ss_pred ----eEEEEEEEEEee----cceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcC----
Q psy11701 295 ----TAQGSGSLTVKE----HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN---- 362 (745)
Q Consensus 295 ----~~~~~~~l~v~~----~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---- 362 (745)
.......+.|.. +|.+...+....+..|+.++|.|.+.+..+..+.+.|++++..+............
T Consensus 323 ~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~ 402 (438)
T 1qgc_4 323 EGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 402 (438)
T ss_dssp CCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEE
T ss_pred ccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEE
Confidence 222345666653 33332222222345799999999999873323599999998776421111222111
Q ss_pred CeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396 (745)
Q Consensus 363 ~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l 396 (745)
.+.|.|......| |.|+|.|.|..|.......+
T Consensus 403 ~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 403 SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp EEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 1258888887778 99999999999976655443
No 32
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=293.66 Aligned_cols=275 Identities=31% Similarity=0.551 Sum_probs=212.6
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEec--cC--CcEEEEccCCC-CCCEEEEEEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG--NY--GKSLIIKHVEF-SDQGSYTCEV 106 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~--~~--~~~L~i~~~~~-~d~G~Y~C~~ 106 (745)
.|+.|...|.+..+.+|++++|.|.+.|.|.+.++|+|+|..+.. .++... .. +..|.|.+++. +|+|.|+|.+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNS-QRFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------C-TTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCC-CceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 355677889999999999999999999999999999999998864 343321 22 26899999998 9999999999
Q ss_pred EeCCeeeEEEEEEEEEEec-------CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce-eec
Q psy11701 107 SNGVGEAKSYSIDLSVLAA-------PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-KVG 178 (745)
Q Consensus 107 ~~~~g~~~~~~~~l~V~~~-------p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~-~~~ 178 (745)
.+..|... ..+.|.|..+ |.+...|....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.......+. ...
T Consensus 84 ~n~~g~~~-~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 84 QNSVGEIT-VHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp ECSSCEEC-CEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECT
T ss_pred ECCCCeEE-EEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCC
Confidence 99888744 6788888875 77888888889999999999999999999999999999988754333333 345
Q ss_pred CceEEEccCCCCCCEEEEEEEEeCCceEEE---EEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeC
Q psy11701 179 PNRITIENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255 (745)
Q Consensus 179 ~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~---~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~ 255 (745)
++.|.|.+++.+|+|.|+|.|.|..|.... .+.+.+...+|.+...+....+.+|+.++|.|.+.+.|.+.+.|+++
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~ 242 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQG 242 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEET
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEEC
Confidence 679999999999999999999999887663 33444434578888888888899999999999999999999999999
Q ss_pred CEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeeccee
Q psy11701 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310 (745)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~ 310 (745)
+..+............|.+.++ +|+|.|+|.|.|..|.....+.|.|..++..
T Consensus 243 ~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 243 AEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp TEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-------
T ss_pred CEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCccc
Confidence 9888644211111223666655 6999999999999999999999999876543
No 33
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1.8e-37 Score=353.96 Aligned_cols=442 Identities=22% Similarity=0.283 Sum_probs=66.2
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeec--CCCeeEEEECCEecCCCCCeEe----------ccCCcEEEEccCCCCCCEE
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDGVPINPSDRISQ----------GNYGKSLIIKHVEFSDQGS 101 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~~~i~~~~~~~~----------~~~~~~L~i~~~~~~d~G~ 101 (745)
...+..+....+.+|++++|.|.+.+. +.+.+.|++++..+........ ......|.|.+++.+|+|.
T Consensus 225 ~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 304 (772)
T 3v2a_R 225 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGL 304 (772)
T ss_dssp EEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSE
T ss_pred eeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeE
Confidence 333334445789999999999999874 4568999999988765433311 1223579999999999999
Q ss_pred EEEEEEeCCeeeEEEEEEEEEEecCeEEecC---ceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeec
Q psy11701 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP---EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178 (745)
Q Consensus 102 Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~---~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~ 178 (745)
|+|.+.+..+... ..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.... . ...
T Consensus 305 Y~C~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~---~-~~~ 379 (772)
T 3v2a_R 305 YTCAASSGLMTKK-NSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNH---T-IKA 379 (772)
T ss_dssp EEEEEECSSCEEE-EEEEEEEECCCC------------------------------------------------------
T ss_pred EEEEEEcCCccee-EEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCc---e-Ecc
Confidence 9999998877654 77899999988775543 45678999999999999999999999999999887421 1 114
Q ss_pred CceEEEccCCCCCCEEEEEEEEeCCceEEE--EEEEEEeecCCeeeeCC---CceEEecCceEEEEEEEeecCCCe-EEE
Q psy11701 179 PNRITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVLAHAPEITEAP---KDEYTVDGKTVVLTCRVFGAPKPE-VNW 252 (745)
Q Consensus 179 ~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~--~~~l~v~~~~p~~~~~~---~~~~v~~g~~~~l~C~~~~~p~~~-i~W 252 (745)
...|.|.++..+|+|.|+|.|.|..|.... .+.|.|.. +|.+.... ....+.+|+.++|.|.+.+.|.+. +.|
T Consensus 380 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~-~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W 458 (772)
T 3v2a_R 380 GHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYV-PPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHW 458 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEec-CCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEE
Confidence 578999999999999999999998886543 45566653 55553221 112377899999999999999886 999
Q ss_pred eeCCEE--------------------------------cc--CceEEEee-----cCcEEEcccCCCCCEEEEEEEEeCC
Q psy11701 253 IHNQKE--------------------------------LT--GGRYTILE-----TGDLKITDVAFADSGEYTCFARNKL 293 (745)
Q Consensus 253 ~~~~~~--------------------------------~~--~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~~~n~~ 293 (745)
++++.. +. ..+..... ...|.|.++ +|+|.|+|.|.|..
T Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~ 536 (772)
T 3v2a_R 459 YWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKV 536 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccc
Confidence 996321 10 00111111 135777766 78999999999999
Q ss_pred ceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEE--------------
Q psy11701 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV-------------- 359 (745)
Q Consensus 294 g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~-------------- 359 (745)
|.....+.+.|..+|.+...|. ..+..|+.+.|.|.+.+.|. +.+.|++++..+.........
T Consensus 537 g~~~~~~~l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~--~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (772)
T 3v2a_R 537 GRGERVISFHVTRGPEITLQPD-MQPTEQESVSLWCTADRSTF--ENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLN 613 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccceeEEEEEECCceeeccCC-cccccCCceEEEEeccCCCC--CCcEEEEcCCcccccccCcccccccccccceeecc
Confidence 9988888999988877766554 44678999999999998875 679999987654321111110
Q ss_pred -----Ec--CCeEEEEecCCCCCCEEEEEEEEeCCceEE--EEEEEEEe--ccCC---CCCCceeEEeecCceeEEEEEe
Q psy11701 360 -----QS--NDYSLTVTKSSELDSGQYTCRAQTELDFIE--AQATLTVQ--VPLE---APSNFTLIQVIDAKKAVVSWNP 425 (745)
Q Consensus 360 -----~~--~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~--~~~~l~v~--~pp~---~P~~~~~~~~~~~~~v~l~W~~ 425 (745)
.. ....|.|.++...|.|.|+|.|.|..|... ....+.+. .+|. .|.+..+ ..+..+.|.|..
T Consensus 614 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v---~~g~~~~l~C~~ 690 (772)
T 3v2a_R 614 ATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTT---SIGESIEVSCTA 690 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEE---eCCCCEEEEEEe
Confidence 00 123489999999999999999999665433 23344443 2222 1122222 445678888876
Q ss_pred CCCCCcceeeeeEEEEEEeccCCCCc-eeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEe
Q psy11701 426 VSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498 (745)
Q Consensus 426 ~~~~~~~~~i~~y~i~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~ 498 (745)
...+. -.| .|.+++.... ...+.+ ......+.|.++...+...|+|.|.|..|....+..+.+.
T Consensus 691 ~g~P~-------p~v-~W~k~g~~l~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 755 (772)
T 3v2a_R 691 SGNPP-------PQI-MWFKDNETLVEDSGIVL-KDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 755 (772)
T ss_dssp --------------------------------------------------------------------------
T ss_pred CccCC-------CeE-EEEECCeECcCCCCeEE-cCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEE
Confidence 32111 123 2333332211 112222 2345678899999999999999999999987776655554
No 34
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=3.2e-34 Score=285.74 Aligned_cols=273 Identities=22% Similarity=0.392 Sum_probs=225.6
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecC-CCeeEEEE-CCEecCCC-CCeEec---cCCcEEEEccCCCCCCEEEEEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTP-LPQTIWSK-DGVPINPS-DRISQG---NYGKSLIIKHVEFSDQGSYTCEV 106 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p-~~~v~W~~-~~~~i~~~-~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~ 106 (745)
|..+.+.|.+..+.+|++++|.|.+.+.| .+.+.|+| +|..+... .++... ....+|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 56678899999999999999999999876 68999999 88887743 444432 34568999999999999999999
Q ss_pred EeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEcc
Q psy11701 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186 (745)
Q Consensus 107 ~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~ 186 (745)
.+..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+............++.|.|.+
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG 161 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETT
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEcc
Confidence 99887666788999999999999999999999999999999999999999999999988765443333345667999999
Q ss_pred CCCCCCEEEEEEEEeCCceE--EEEEEEEEeecCCeeeeCCC--ceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc
Q psy11701 187 LRKSDTGNYGCNATNSLGYV--YKDVYVNVLAHAPEITEAPK--DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~--~~~~~l~v~~~~p~~~~~~~--~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~ 262 (745)
+..+|+|.|+|.+.|..+.. ...+.+.|.. +|.+...+. ...+.+|+.++|.|.+.+.|.+.+.|++++..+...
T Consensus 162 ~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~ 240 (291)
T 1qz1_A 162 IKKTDEGTYRCEGRILARGEINFKDIQVIVNV-PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENE 240 (291)
T ss_dssp CCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE-EEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred CccccCeEEEEEEEecCCCceeeEEEEEEEec-CCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCC
Confidence 99999999999999876433 3445666653 666655443 446778999999999999999999999999987643
Q ss_pred -----eEEEeec-CcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 263 -----RYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 263 -----~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
++..... ..|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 241 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 241 EEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp --CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 3444333 4699999999999999999999999998888888864
No 35
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=6.5e-36 Score=341.18 Aligned_cols=435 Identities=18% Similarity=0.202 Sum_probs=128.9
Q ss_pred eccceeEecC--CcEEEEEEEeecCCCeeEEEEC--CEecCCC-CCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeee
Q psy11701 39 TRKKEVALRN--KKVELFCIFGGTPLPQTIWSKD--GVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113 (745)
Q Consensus 39 ~~~~~~v~~G--~~~~l~C~~~g~p~~~v~W~~~--~~~i~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 113 (745)
.+....+.+| ++++|.|.+.+ |.+.++|+|+ +..+... ..... .....|.|.+++.+|.|.|+|.+.+.....
T Consensus 132 ~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 209 (772)
T 3v2a_R 132 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISW-DSKKGFTIPSYMISYAGMVFCEAKINDESY 209 (772)
T ss_dssp CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCEE-ETTTEEEEEGGGTTTCSEEEEEEEETTEEE
T ss_pred cceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceeec-CCCCCeEecCCChhhCeEEEEEEEECCceE
Confidence 3566778999 99999999976 7789999997 6655443 33333 345679999999999999999999875544
Q ss_pred EEEEEEEEEEe--cCeEEecCc-eeEeeCCCeEEEEEEEee--cCCCeEEEEeCCEeccCCCCCC---------ceeecC
Q psy11701 114 KSYSIDLSVLA--APYFTVEPE-FINAAEEETVTFECKASG--LPEPEIHWVHNGKPISQAPPNP---------RRKVGP 179 (745)
Q Consensus 114 ~~~~~~l~V~~--~p~~~~~~~-~~~v~~G~~~~l~C~~~~--~p~~~v~W~~~g~~~~~~~~~~---------~~~~~~ 179 (745)
.+..+.+.+.. .+.+...+. ...+.+|++++|.|.+.+ .+.+.+.|++++..+....... ......
T Consensus 210 ~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (772)
T 3v2a_R 210 QSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 289 (772)
T ss_dssp ECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEE
T ss_pred EEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEE
Confidence 44435555543 233444444 368999999999999987 4556899999988765322110 112234
Q ss_pred ceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCC---CceEEecCceEEEEEEEeecCCCeEEEeeCC
Q psy11701 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP---KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256 (745)
Q Consensus 180 ~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~---~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~ 256 (745)
..|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. +|.+...+ ....+.+|+.++|.|.+.+.|.+.+.|++++
T Consensus 290 ~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g 368 (772)
T 3v2a_R 290 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE-KPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNG 368 (772)
T ss_dssp EEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEEC-CCC---------------------------------------
T ss_pred EEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeC-CCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECC
Confidence 5899999999999999999999998888888888875 55544332 4556889999999999999999999999999
Q ss_pred EEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceE--EEEEEEEEeecceeecCC---CcEEEecCCeEEEEEEE
Q psy11701 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA--QGSGSLTVKEHTHITDQP---EDYEVEAGQSATFRCNA 331 (745)
Q Consensus 257 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~l~v~~~p~~~~~p---~~~~~~~g~~~~l~C~~ 331 (745)
..+... +.....+.|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|.+.... ....+..|+.+.|.|.+
T Consensus 369 ~~l~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~ 447 (772)
T 3v2a_R 369 IPLESN-HTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTV 447 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCCCC-ceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEe
Confidence 877642 223344789999999999999999999988865 456677777777654331 11236789999999999
Q ss_pred EecCCCCcE-EEEeeCCee--------------------------------ccCCCCCeEEE--c---CCeEEEEecCCC
Q psy11701 332 VSDPSLKLS-IVWLRGSEP--------------------------------IDFESEPRFVQ--S---NDYSLTVTKSSE 373 (745)
Q Consensus 332 ~~~~~~~~~-i~W~~~~~~--------------------------------~~~~~~~~~~~--~---~~~~l~i~~~~~ 373 (745)
.+.|. +. +.|++++.. +... ..+... . ....|.|..+
T Consensus 448 ~g~p~--p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~-~~~~~~~~~~~~~~~~L~i~~~-- 522 (772)
T 3v2a_R 448 YAIPP--PHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVN-KNQFALIEGKNKTVSTLVIQAA-- 522 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCC--CcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEe-ccceeeccCcceEEEEEEEeec--
Confidence 98876 44 999986321 0000 000000 0 1135666655
Q ss_pred CCCEEEEEEEEeCCceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCce-
Q psy11701 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI- 452 (745)
Q Consensus 374 ~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~- 452 (745)
.|.|.|+|.|.|..|.....+.+.|..+|.......... ..+..+.|.|....... -.+ .|.+.+.....
T Consensus 523 ~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~-~~G~~v~l~C~~~~~p~-------~~v-~W~k~~~~~~~~ 593 (772)
T 3v2a_R 523 NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQP-TEQESVSLWCTADRSTF-------ENL-TWYKLGPQPLPI 593 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCeEEEEEEEccccccceeEEEEEECCceeeccCCccc-ccCCceEEEEeccCCCC-------CCc-EEEEcCCccccc
Confidence 689999999999999888888888875543221111111 45566777776532110 112 12222111000
Q ss_pred e--------------------EE-EEccCceeEEEecccccCcceeEEEEEecCCCCCCC
Q psy11701 453 R--------------------EL-IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491 (745)
Q Consensus 453 ~--------------------~~-~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~ 491 (745)
. .. .........+.|.++...+.+.|+|.|.|..|....
T Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 653 (772)
T 3v2a_R 594 HVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRH 653 (772)
T ss_dssp ------------------------------------------------------------
T ss_pred ccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEE
Confidence 0 00 000112334888999999999999999997655433
No 36
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=283.93 Aligned_cols=275 Identities=23% Similarity=0.409 Sum_probs=221.8
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEE-CCEecCCCCCeEeccCC--cEEEEccCCCCCCEEEEEEEEe
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYG--KSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~i~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
+++.+...+.+..+.+|++++|.|.+.|.|. .+.|+| +|..+....++.+...+ ..|.|.+++.+|+|.|+|.+.+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 3566778899999999999999999998875 999999 78888777777654433 5899999999999999999999
Q ss_pred CCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCC
Q psy11701 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (745)
..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+............++.|.|.++.
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 161 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNIN 161 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCC
T ss_pred ccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecc
Confidence 88887777889999999988888888899999999999999999999999999998876543332333456789999999
Q ss_pred CCCCEEEEEEEEeCCceEE--EEEEEEEeecCCeeeeCCC--ceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc-e
Q psy11701 189 KSDTGNYGCNATNSLGYVY--KDVYVNVLAHAPEITEAPK--DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-R 263 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~~~--~~~~l~v~~~~p~~~~~~~--~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~ 263 (745)
.+|+|.|+|.+.|..+... ..+.+.+.. +|.+...+. ...+.+|+.++|.|.+.+.|.+.+.|++++..+... +
T Consensus 162 ~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 240 (291)
T 2wim_A 162 KSDEGIYRCEGRVEARGEIDFRDIIVIVNV-PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEK 240 (291)
T ss_dssp GGGCEEEEEEEEETTTTEEEEEEEEEEEEB-CCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTT
T ss_pred hhhCEEEEEEEEECCCCeeEEeeEEEEecc-CCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCcc
Confidence 9999999999999875433 345565553 666655544 345778999999999999999999999999987543 4
Q ss_pred EEEee-cCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 264 YTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 264 ~~~~~-~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
+.... .+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..++
T Consensus 241 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 241 YILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred EEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 43332 3579999999999999999999999999999999987654
No 37
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=5.6e-33 Score=290.95 Aligned_cols=273 Identities=26% Similarity=0.482 Sum_probs=230.3
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC---CCCeEeccCCcEEEEccCCCCCCEEEEEEEEeC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
|..+...+....+.+|++++|.|.+.|.|.+.+.|+|++..+.. ..+... ..+++|.|.+++.+|+|.|+|.+.+.
T Consensus 121 p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~ 199 (403)
T 3laf_A 121 PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVV-LPSGALQISRLQPGDSGVYRCSARNP 199 (403)
T ss_dssp CCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEE-CTTSCEEECSCCGGGCEEEEEEEECS
T ss_pred CCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEE-cCCceEEEcccccccCEEEEEEEEcC
Confidence 55666778889999999999999999999999999999988853 233433 33458999999999999999999998
Q ss_pred CeeeEEEEEEEEEEecCe------EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEE
Q psy11701 110 VGEAKSYSIDLSVLAAPY------FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183 (745)
Q Consensus 110 ~g~~~~~~~~l~V~~~p~------~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~ 183 (745)
.+...+..+.|.|...|. +...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ......++.|.
T Consensus 200 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~~L~ 278 (403)
T 3laf_A 200 ASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSK-KYSLLGGSNLL 278 (403)
T ss_dssp SCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSS-SEEEETTTEEE
T ss_pred CCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCc-eEEECCccEEE
Confidence 776555567788876653 45567778889999999999999999999999999998864321 22334567899
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-c
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-G 262 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~ 262 (745)
|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .
T Consensus 279 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~ 357 (403)
T 3laf_A 279 ISNVTDDDSGTYTCVVTYKNENISASAELTVLV-PPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSD 357 (403)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSS
T ss_pred EeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC-CCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCC
Confidence 999999999999999999999988889998875 78888888888899999999999999999999999999988753 4
Q ss_pred eEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 263 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
++.....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 358 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 358 YFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp SEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred cEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 4555566789999999999999999999999999999999987653
No 38
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3.3e-32 Score=270.02 Aligned_cols=274 Identities=22% Similarity=0.449 Sum_probs=227.8
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee-ecCceEEEccCCCCCCEEEEEEEEe
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK-VGPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
..+|.|...|....+.+|++++|.|.+.+.|.+.++|+|+|..+.......... .....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 358889999999999999999999999998999999999999887443211111 1346899999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCeeeeCC-CceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc-eEEEe---ecCcEEEcc
Q psy11701 202 SLGYVYKDVYVNVLAHAPEITEAP-KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTIL---ETGDLKITD 276 (745)
Q Consensus 202 ~~g~~~~~~~l~v~~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~---~~~~l~i~~ 276 (745)
..|.....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ++... ....|.|.+
T Consensus 83 ~~g~~~~~~~l~V~~-~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (284)
T 2rik_A 83 VAGKDSCSAQLGVQE-PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN 161 (284)
T ss_dssp TTEEEEEEEEEEEEC-CCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECS
T ss_pred CCceEEEEEEEEccC-CCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECC
Confidence 999888888999885 56655444 4456889999999999999999999999999887543 22221 234699999
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCC
Q psy11701 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356 (745)
Q Consensus 277 ~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~ 356 (745)
++..|+|.|+|.+.|..|.....+.|.|..+|.+...|....+..|+.+.|.|.+.+.|. +.+.|++++..+......
T Consensus 162 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~v~W~~~~~~~~~~~~~ 239 (284)
T 2rik_A 162 LSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPP--FQVSWHKDKRELRSGKKY 239 (284)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSC--CEEEEEETTEEECBTTTE
T ss_pred CCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCC--CEEEEEECCEECcCCCCE
Confidence 999999999999999999999999999999998888888888999999999999998876 789999999988744332
Q ss_pred eEEEc-CCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 357 RFVQS-NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 357 ~~~~~-~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
..... ....|.|..+...|.|.|+|.|.|..|.....+.|.|+
T Consensus 240 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 240 KIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 22222 22579999999999999999999999999888888774
No 39
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=5.5e-32 Score=299.43 Aligned_cols=417 Identities=14% Similarity=0.108 Sum_probs=268.6
Q ss_pred CCCEEEEEEEEeCCceEEEEEEEEEeecceeecCC-CcEEE--ecCCeEEEEEEEEe----cCCCCcEEEEeeCCe-ecc
Q psy11701 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-EDYEV--EAGQSATFRCNAVS----DPSLKLSIVWLRGSE-PID 351 (745)
Q Consensus 280 ~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p-~~~~~--~~g~~~~l~C~~~~----~~~~~~~i~W~~~~~-~~~ 351 (745)
++.|.+.|. .|..|..-......+...| ..| ..+.+ .....+.|.|.... .+.. +.++|..... ...
T Consensus 133 ~c~g~~~Cc-~n~cG~~C~~P~~~~~~~P---~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~ 207 (680)
T 1zlg_A 133 ECSGVKKCC-SNGCGHTCQVPKTLYKGVP---LKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPS 207 (680)
T ss_pred cCCCccccc-cccccccccccceeeeccc---ccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcC
Confidence 456777774 3444442111111123322 334 34444 34567888888642 2221 5556654321 000
Q ss_pred C---CCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCce-EE--EEEEEEEe---ccCCCCCCceeEEee--cCc---
Q psy11701 352 F---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IE--AQATLTVQ---VPLEAPSNFTLIQVI--DAK--- 417 (745)
Q Consensus 352 ~---~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~-~~--~~~~l~v~---~pp~~P~~~~~~~~~--~~~--- 417 (745)
. .............+.|.++.....|.|++.|.|..|. .. ....+... .+|.+|.++.+.. . +.+
T Consensus 208 ~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~-~~~~~~g~~ 286 (680)
T 1zlg_A 208 EDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLAN-STVNSDGSV 286 (680)
T ss_pred ccccCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeee-eeecCCCce
Confidence 0 0111122234456889999999999999999999882 22 22222221 4788999999876 5 667
Q ss_pred eeEEEEEeCCCCCcceeeeeEEEEEEec-c----CCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCC
Q psy11701 418 KAVVSWNPVSPQSLRGHFRGYKVQTWTE-K----DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492 (745)
Q Consensus 418 ~v~l~W~~~~~~~~~~~i~~y~i~~~~~-~----~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S 492 (745)
++.|+|+++. ..+++|.+|.|+|... . .....+....+ ......++|.+|.+++.|.|+|.|.|..|.|++|
T Consensus 287 sv~l~W~pP~--~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S 363 (680)
T 1zlg_A 287 TVTIVWDLPE--EPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTT-DGFQNSVILEKLQPDCDYVVELQAITYWGQTRLK 363 (680)
T ss_pred EEEEEecCCC--CCCCceeEEEEEEEecccccccCCccceEEEEE-cCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCC
Confidence 9999999853 3568999999988732 1 11123444445 5566899999999999999999999999999988
Q ss_pred cc---eEEeCCCCCCCCCCceeEEEcCCceEEE-----------EeeCCCCCCCceeeEEEEEEEcCCcccCCcc-----
Q psy11701 493 EI---ISFVTPEGVPGTVQSLEAIPLGSSAFYL-----------KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL----- 553 (745)
Q Consensus 493 ~~---~~~~t~~~~P~~p~~~~~~~~~~~~i~l-----------~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~----- 553 (745)
.. +.++|.+++|+ |.++.+...+.++|.| +|.+|...+ .+.+|.|.|+..+........
T Consensus 364 ~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~~-~~~~y~v~w~~~~~~~v~~Y~V~w~~ 441 (680)
T 1zlg_A 364 SAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQD-GQLQVKVYWKKTEDPTVNRYHVRWFP 441 (680)
T ss_pred CCceeEEEECCCCCCC-ccccccccccCccccccccccCCCccccccCCcccC-CcceEEEEEeCCCCCccceEEEEEee
Confidence 87 88899988888 8899998888888877 999986433 467899998765432100000
Q ss_pred ---------cccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeeccc----------------------
Q psy11701 554 ---------ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---------------------- 602 (745)
Q Consensus 554 ---------~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~---------------------- 602 (745)
...........++++|.+|.|++.|.|+|.|+|..|.|......+....
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~ 521 (680)
T 1zlg_A 442 EACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVL 521 (680)
T ss_pred eecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCccccceeCCCccccccCCccccccCCCCcccc
Confidence 0000011345678999999999999999999999997653221111100
Q ss_pred ----CCCCC----CCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceE
Q psy11701 603 ----KNPDN----VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674 (745)
Q Consensus 603 ----~~~~~----~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y 674 (745)
..|.+ +.+.....+ |.|+|+++... .||.|.+|+|.|....++...... ...
T Consensus 522 ~~v~~~P~~l~~~v~v~~~~~t-i~lsW~pP~~~-~ng~I~gY~V~y~~~~~~~~~~~~------------------~~~ 581 (680)
T 1zlg_A 522 SKVLAKPENLSASFIVQDVNIT-GHFSWKMAKAN-LYQPMTGFQVTWAEVTTESRQNSL------------------PNS 581 (680)
T ss_pred ccccCCccccceeEEEeccCce-EEEEecCCCCC-CCCCceeEEEEEEEccCCCccccc------------------cce
Confidence 00011 001111223 89999977643 489999999999865332210000 000
Q ss_pred EEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeCCCCCc
Q psy11701 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGGT 743 (745)
Q Consensus 675 ~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~~~~ 743 (745)
.+ ......+++.+++.|.+|+|++.|.|+|+|.|.+|.|++ +++.|+|+++++
T Consensus 582 ~~---------------~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P 634 (680)
T 1zlg_A 582 II---------------SQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPP 634 (680)
T ss_pred ee---------------ecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCC
Confidence 00 001122467889999999999999999999999999998 889999987753
No 40
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=100.00 E-value=4.3e-32 Score=280.07 Aligned_cols=315 Identities=19% Similarity=0.297 Sum_probs=233.4
Q ss_pred cCCCCCCceeEEeecCc-eeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEE
Q psy11701 401 PLEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479 (745)
Q Consensus 401 pp~~P~~~~~~~~~~~~-~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~ 479 (745)
||.+|.++++.. .+.+ ++.|.|+++. ++.+.+|.|+|+.............+ ......+++.+|.+++.|.|+
T Consensus 1 Pp~~P~~l~~~~-~~~~~sv~l~W~~~~----~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~ 74 (368)
T 1fnf_A 1 PLSPPTNLHLEA-NPDTGVLTVSWERST----TPDITGYRITTTPTNGQQGNSLEEVV-HADQSSCTFDNLSPGLEYNVS 74 (368)
T ss_dssp CCCCCEEEEEEE-CSSSSCEEEEEECCS----CSSCCEEEEEEEETTTCSSCCEEEEE-CTTCCEEECCCCCTTSCEEEE
T ss_pred CCCCCcceEEEe-cCCCcEEEEEEeCCC----CCCceEEEEEEEECCCCCCceeEEEe-cCCcCEEEECCCCCCCEEEEE
Confidence 688999999987 6665 6999999853 46789999999876654333333445 667889999999999999999
Q ss_pred EEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccc
Q psy11701 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559 (745)
Q Consensus 480 V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~ 559 (745)
|.|.|..|.+.++. ..+...+ .+|.++++...+.++|.|+|++|. ++.+.+|.|+|+..+.... +... .+
T Consensus 75 V~a~~~~g~s~~~~---~~~~~~~-~~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~~~~~~~--~~~~--~~ 144 (368)
T 1fnf_A 75 VYTVKDDKESVPIS---DTIIPAV-PPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEED--VAEL--SI 144 (368)
T ss_dssp EEEEETTEECCCEE---EEECCCC-CCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTC--CEEE--EE
T ss_pred EEEEcCCCccCcee---eeecCCC-cCCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEEEEECCCCCc--cEEE--Ec
Confidence 99999998876543 2333333 378899999989999999999984 4689999999998654321 1111 12
Q ss_pred cCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccCCCcceEEE
Q psy11701 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639 (745)
Q Consensus 560 ~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i 639 (745)
.....++.+.+|.|++.|.|+|.|.|..|.|.++..........+..+.+.....+++.|+|+++. |.+.+|.|
T Consensus 145 -~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v 218 (368)
T 1fnf_A 145 -SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPR-----ATITGYRI 218 (368)
T ss_dssp -CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSEEEEEEECCS-----SCCSEEEE
T ss_pred -CCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEeeecCCCCCCCccEEEEccCCEEEEEEeCCC-----CCcCEEEE
Confidence 456689999999999999999999999998887544333323333334444556789999998763 56799999
Q ss_pred EEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeE---------------------------
Q psy11701 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIR--------------------------- 692 (745)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~--------------------------- 692 (745)
.|+.......+. ..........+++.||.+++.|.|+|.|....|.+..+..
T Consensus 219 ~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~ 297 (368)
T 1fnf_A 219 RHHPEHFSGRPR-EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWD 297 (368)
T ss_dssp EEECSCCSSCCE-EEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSCEEEEEEEEETTEEEEEEE
T ss_pred EEecCCCCCCcc-EEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCCCeeEEEecCCCEEEEEee
Confidence 998765433322 2233445688999999999999999999444333221110
Q ss_pred ----------------------EEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCc---ceEEeC
Q psy11701 693 ----------------------ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---IISFVT 738 (745)
Q Consensus 693 ----------------------~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~---~~~~~t 738 (745)
.....+++.+.+.+.+|.|++.|.|+|+|.|.+|.|++|+ .++|+|
T Consensus 298 ~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~~~~i~~~T 368 (368)
T 1fnf_A 298 APAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYRT 368 (368)
T ss_dssp CCSSCCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBCCCEEEEECC
T ss_pred CCCCccceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccCceeeeeeeC
Confidence 1123356778999999999999999999999999999987 455554
No 41
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=318.68 Aligned_cols=409 Identities=17% Similarity=0.173 Sum_probs=283.2
Q ss_pred CCCcEEEecCCeEEEEEEEEec-----CCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCC
Q psy11701 313 QPEDYEVEAGQSATFRCNAVSD-----PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387 (745)
Q Consensus 313 ~p~~~~~~~g~~~~l~C~~~~~-----~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 387 (745)
.|.+..+..|++++|.|.+... ..+...|.|++++..+... ..+........|.|.++...+. .|.|.+....
T Consensus 9 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~-~~~~~~~~~~~l~i~~~~~~~~-~y~C~~~~~~ 86 (589)
T 3l5h_A 9 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTIINRTASSVTFTDIASLNI-QLTCNILTFG 86 (589)
T ss_dssp SCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGG-GCBCCSSSCCBCCCCCCCSSCC-CCCCC-CCTT
T ss_pred ecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChH-HccccCCcEeEEEEecCCCcce-eeEEecccCC
Confidence 4556667899999999999743 1223678999998766532 2222223345788888887765 4778876422
Q ss_pred c--eEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEE
Q psy11701 388 D--FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465 (745)
Q Consensus 388 g--~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (745)
. .......|.+..||.+|.++++.. ....++.++|+++... +.+.+|.|+|+..... .............+
T Consensus 87 ~~~~~~~~~~l~v~~pP~~P~nl~c~~-~~~~~~~~~W~~~~~~---~~~~~y~l~~~~~~~~---~~~c~~~~~~~~~c 159 (589)
T 3l5h_A 87 QLEQNVYGITIISGLPPEKPKNLSCIV-NEGKKMRCEWDGGRET---HLETNFTLKSEWATHK---FADCKAKRDTPTSC 159 (589)
T ss_dssp CC-CCCCCCCCCC-CCCCCCEEEEEEE-ETTSCEEEEEECCSCC---SSCEEEEECCBCSSSB---CCCEECBTTBSSCC
T ss_pred CcccEEEeEEEeccCCCCCCEeeEEEE-CCCceEEEEECCCCcC---CcCceEEEEEEEcCCC---cccCCCCCCCcEEE
Confidence 1 223445677788999999999988 7788999999986422 3578899977544321 11122113445677
Q ss_pred Eec-ccccCcceeEEEEEecCCCCCCCCcceEEeCC-CCCCCCCCceeEE--EcCCceEEEEeeCCCCCCCceeeEEEEE
Q psy11701 466 EVD-KFVPASKNFARVLAFNGAYNGPPSEIISFVTP-EGVPGTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKY 541 (745)
Q Consensus 466 ~i~-~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~-~~~P~~p~~~~~~--~~~~~~i~l~W~~p~~~~g~i~~Y~v~~ 541 (745)
.+. +|.+++.|.|+|.|.|..|.+.. ..+.+.+. ...|.+|.++.+. ..+.+++.|+|++|...++.+.+|.|+|
T Consensus 160 ~~~~~l~~~~~Y~~~v~a~n~~G~~~s-~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~ 238 (589)
T 3l5h_A 160 TVDYSTVYFVNIEVWVEAENALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQY 238 (589)
T ss_dssp BCCSCCCSSSCEEECEEEEESSCCBCC-CCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEE
T ss_pred EECCCCchheeEEEEEEEEeCCCCccc-ccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEE
Confidence 777 79999999999999999998743 33445433 3478899999884 4678999999999987778999999999
Q ss_pred EEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCC-C----------
Q psy11701 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE-G---------- 610 (745)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~-~---------- 610 (745)
+..+...|...... .......++.+.+|.|++.|.|+|+|.|..|.|.+|++.......+....+ .
T Consensus 239 ~~~~~~~w~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~ 315 (589)
T 3l5h_A 239 RTKDASTWSQIPPE---DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDP 315 (589)
T ss_dssp EETTCSCCBCCCTT---SSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCS
T ss_pred CCCCCCCcEEEccc---cCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeec
Confidence 98876554432210 113456889999999999999999999999999887665444333333222 1
Q ss_pred -CCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCC
Q psy11701 611 -RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEG 689 (745)
Q Consensus 611 -~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~ 689 (745)
.....+++.|+|++++....+|.|.+|.|.|+..+.. +.... ..... +..|.+++.|.|+|.|....|.++.
T Consensus 316 ~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~--~~~~~---~~~~~--~~~l~~~~~Y~~~V~A~n~~G~~~~ 388 (589)
T 3l5h_A 316 SHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH--LQNYT---VNATK--LTVNLTNDRYLATLTVRNLVGKSDA 388 (589)
T ss_dssp CSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSC--CCBCC---CSSSC--CEECCCSSCCCEEEEEEBTTBCCCC
T ss_pred CcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCC--ceeec---cCCce--EEEEeCCCCEEEEEEEEeCCccCCC
Confidence 1345689999999988888999999999999765332 22221 12233 3448899999999999766554322
Q ss_pred CeEE-------------------------------------------------------EEEecCCCcEEEecccccCCc
Q psy11701 690 SIRE-------------------------------------------------------LIVNKGESTTTEVDKFVPASK 714 (745)
Q Consensus 690 ~~~~-------------------------------------------------------~~~~~~~~~~~~i~~L~p~~~ 714 (745)
+... ..+.......+.+.+|.|++.
T Consensus 389 s~~~~~~~~~~~~~p~~~l~~~~~~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~ 468 (589)
T 3l5h_A 389 AVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKC 468 (589)
T ss_dssp CCCCCCCTTCCCCSCCCSCEEEECSSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSE
T ss_pred eEEEeecccccCCCCcceEEEEECCCeEEEEEECCCCCccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcE
Confidence 1100 011112234566799999999
Q ss_pred ceeEEEEecCcccCCCCcceEEeCCCCC
Q psy11701 715 NFARVLAFNGAYNGPPSEIISFVTPEGG 742 (745)
Q Consensus 715 Y~~~v~A~~~~G~g~~s~~~~~~t~~~~ 742 (745)
|.|+|+|.|..|.|+++. +.+.|.++.
T Consensus 469 Y~~~V~A~~~~g~g~~~~-~~~~t~~~~ 495 (589)
T 3l5h_A 469 YLITVTPVYADGPGSPES-IKAYLKQAP 495 (589)
T ss_dssp EEEEECBEETTEECCCEE-EEEESSCCC
T ss_pred EEEEEEEEeCCcccCCEE-EEEEeccCC
Confidence 999999999999998864 666676554
No 42
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=3.9e-32 Score=281.40 Aligned_cols=264 Identities=31% Similarity=0.448 Sum_probs=212.9
Q ss_pred eccceeEecCCcEEEEEEEe-ecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEE--
Q psy11701 39 TRKKEVALRNKKVELFCIFG-GTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKS-- 115 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~-- 115 (745)
.+....+.+|+.+.|.|... +.|.+.+.|++++.++....+......++.|.|.+++.+|+|.|+|.|.|..+....
T Consensus 108 ~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~ 187 (384)
T 3kld_A 108 TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLG 187 (384)
T ss_dssp CCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEEC
T ss_pred CCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeC
Confidence 34557899999999999763 557789999999999876666555555668999999999999999999997654321
Q ss_pred EEEEEEEE-------ecCeEE-ecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC-CEeccCCCCCCceeecCceEEEcc
Q psy11701 116 YSIDLSVL-------AAPYFT-VEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GKPISQAPPNPRRKVGPNRITIEN 186 (745)
Q Consensus 116 ~~~~l~V~-------~~p~~~-~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~L~i~~ 186 (745)
....+.+. .+|.+. ..|....+.+|+++.|.|.+.|.|.+.+.|+|+ +..+.. ..+....++.|.|.+
T Consensus 188 ~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~---~~~~~~~~~~L~I~~ 264 (384)
T 3kld_A 188 PPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPN 264 (384)
T ss_dssp CCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCT---TCEECTTSCEEEECS
T ss_pred CceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccc---cceecCCCcEEEECC
Confidence 11222221 234443 346677889999999999999999999999995 444442 122333467899999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEE
Q psy11701 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~ 266 (745)
++.+|+|.|+|.|.|..|.....+.|.|.. +|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.......
T Consensus 265 v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~-~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~ 343 (384)
T 3kld_A 265 FQQEDAGSYECVAENSRGKNVAKGQLTFYA-QPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQ 343 (384)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEE
T ss_pred CChhhCEEEEEEEEcCCCeEEEEEEEEEec-CCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEE
Confidence 999999999999999999998888888875 7778788888899999999999999999999999999999886443333
Q ss_pred eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 267 ~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
...++|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 344 ~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 344 IEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 4667999999999999999999999999999999998853
No 43
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=284.56 Aligned_cols=272 Identities=22% Similarity=0.301 Sum_probs=212.3
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeec-CCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGT-PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
.|+.+. .+.+..+.+|++++|.|.+.+. |.+.+.|+|+|..|....++.+......|.|.+++.+|+|.|+|.+.+..
T Consensus 6 ~~P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 84 (317)
T 2y25_A 6 TGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDR 84 (317)
T ss_dssp SCCEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSS
T ss_pred CCCcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCC
Confidence 344444 4556999999999999999887 78899999999999877777766666799999999999999999999988
Q ss_pred eeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEee----------cCCCeEEEEeCCEeccCCCCCCceeec--
Q psy11701 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG----------LPEPEIHWVHNGKPISQAPPNPRRKVG-- 178 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~----------~p~~~v~W~~~g~~~~~~~~~~~~~~~-- 178 (745)
|... ..+.|.|...|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+...... .....
T Consensus 85 g~~~-~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~-~~~~~~~ 162 (317)
T 2y25_A 85 GKDK-SRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRV-KTGVTGE 162 (317)
T ss_dssp CEEE-EEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSE-EEEECSS
T ss_pred CcEE-EEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCe-EEeccCC
Confidence 7665 556666666555544455556678888888888776 688999999999988743211 11112
Q ss_pred CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee-------------------cCCeeee-CCCceEEecCceEEE
Q psy11701 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-------------------HAPEITE-APKDEYTVDGKTVVL 238 (745)
Q Consensus 179 ~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~-------------------~~p~~~~-~~~~~~v~~g~~~~l 238 (745)
...|.|.+++.+|+|.|+|.+.|..|.....+.+.+.. .+|.+.. .+....+.+|+.++|
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 242 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 242 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCE
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEE
Confidence 23599999999999999999999999888877776531 1334443 355678899999999
Q ss_pred EEEEeecCCCeEEEeeCCEEccC-ceEEEeec-C---cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 239 TCRVFGAPKPEVNWIHNQKELTG-GRYTILET-G---DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 239 ~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~-~---~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
.|.+.+.|.+.+.|++++..+.. .++.+... + .|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 243 ~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 243 TCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 99999999999999999988753 34454433 3 799999999999999999999999999888888864
No 44
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=1.1e-33 Score=299.78 Aligned_cols=352 Identities=16% Similarity=0.195 Sum_probs=234.1
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEecC-----------------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPIN-----------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i~-----------------~~~~~~~~~----~~~~L~ 90 (745)
++..|..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+.. ...+|.
T Consensus 3 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (444)
T 1igt_B 3 KLQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQ 82 (444)
T ss_dssp EEEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEE
Confidence 34566778899999999999998764 568999985 33210 124655432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCee--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGE--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHN 162 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~ 162 (745)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.+.|.|.+.|. |.+ .+.|+++
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 162 (444)
T 1igt_B 83 MSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 162 (444)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecC
Confidence 9999999999999999986543 222345677763 4555443333346899999999999884 776 9999999
Q ss_pred CEeccCCCCCC----ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe-----------------ecCCee
Q psy11701 163 GKPISQAPPNP----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL-----------------AHAPEI 221 (745)
Q Consensus 163 g~~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~-----------------~~~p~~ 221 (745)
+..+....... ......+.|.|.++..+| |.|+|.|.|..+.......+.+. ..+|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v 241 (444)
T 1igt_B 163 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSV 241 (444)
T ss_dssp TBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEE
T ss_pred CCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceE
Confidence 87642110000 111123578999999999 99999999998876554444321 124554
Q ss_pred -eeCCCceE-EecCceEEEEEEEeecC----CCeEEEeeCCEEccCce---EEE------eecCcEEEcccCCCCCEEEE
Q psy11701 222 -TEAPKDEY-TVDGKTVVLTCRVFGAP----KPEVNWIHNQKELTGGR---YTI------LETGDLKITDVAFADSGEYT 286 (745)
Q Consensus 222 -~~~~~~~~-v~~g~~~~l~C~~~~~p----~~~i~W~~~~~~~~~~~---~~~------~~~~~l~i~~~~~~d~G~Y~ 286 (745)
...|.... +.+|+.++|.|.+.+.+ .+.+.|++++..+.... ... ...+.|.|.++..+|.|.|+
T Consensus 242 ~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 321 (444)
T 1igt_B 242 FIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFK 321 (444)
T ss_dssp EEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEE
T ss_pred EecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEE
Confidence 34443333 57899999999999884 35899999998764321 111 12347999999999999999
Q ss_pred EEEEeCCceE--EEEEEE--EEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcC
Q psy11701 287 CFARNKLGTA--QGSGSL--TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362 (745)
Q Consensus 287 C~~~n~~g~~--~~~~~l--~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~ 362 (745)
|.|.|..+.. ...+.+ .+..+|.+...+.......+..+.|.|.+.+.+++.+.+.|++++..+............
T Consensus 322 C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 401 (444)
T 1igt_B 322 CKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDS 401 (444)
T ss_dssp EEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECT
T ss_pred EEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCC
Confidence 9999988765 333222 334455543322211112344599999999865544599999999877421111111122
Q ss_pred Ce------EEEEecCCCCCCEEEEEEEEeCCc
Q psy11701 363 DY------SLTVTKSSELDSGQYTCRAQTELD 388 (745)
Q Consensus 363 ~~------~l~i~~~~~~~~g~y~c~a~n~~g 388 (745)
++ .|.+......|.|.|+|.|.|..-
T Consensus 402 ~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 402 DGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp TSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred CCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 22 345555555678999999999753
No 45
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=267.87 Aligned_cols=273 Identities=28% Similarity=0.486 Sum_probs=211.0
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecC---ceEEEccCCC-CCCEEEEEE
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP---NRITIENLRK-SDTGNYGCN 198 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~---~~L~i~~v~~-~d~G~Y~C~ 198 (745)
..+|.|...|.+..+.+|+++.|.|.+.|.|.+.++|+|+|..+...... .....+ ..|.|.++.. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~-~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFE-TIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEE-EEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceE-EEEecCCCceEEEEecccccCCCeEEEEE
Confidence 45889999999999999999999999999999999999999988532111 111122 5799999998 999999999
Q ss_pred EEeCCceEEEEEEEEEeecC------CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc----eEEEee
Q psy11701 199 ATNSLGYVYKDVYVNVLAHA------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG----RYTILE 268 (745)
Q Consensus 199 ~~~~~g~~~~~~~l~v~~~~------p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~----~~~~~~ 268 (745)
+.|..|.....+.|.|...+ |.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+... ++....
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECT
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCC
Confidence 99999988778888887532 67788888888999999999999999999999999999887532 555666
Q ss_pred cCcEEEcccCCCCCEEEEEEEEeCCceEEEE-EEEEEe---ecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEe
Q psy11701 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGS-GSLTVK---EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344 (745)
Q Consensus 269 ~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v~---~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~ 344 (745)
++.|.|.++...|+|.|+|.|.|..|..... ..+.|. .+|.+...|....+..|+.+.|.|.+.+.|. +.+.|+
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~--p~v~W~ 240 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPM--PYVKWM 240 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESC--CEEEEE
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCC--CEEEEE
Confidence 7799999999999999999999998876532 445553 5666777777777889999999999999886 679999
Q ss_pred eCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCC
Q psy11701 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403 (745)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~ 403 (745)
+++..+..... . ......|.+..+ .|.|.|+|.|.|..|.....+.|.|..++.
T Consensus 241 ~~~~~l~~~~~--~-~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 241 QGAEDLTPEDD--M-PVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp ETTEECSCSSS--C-CBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC------
T ss_pred ECCEECCCccc--c-cCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 99988764321 1 122335666655 689999999999999999999998876543
No 46
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=100.00 E-value=1.9e-31 Score=275.88 Aligned_cols=311 Identities=17% Similarity=0.276 Sum_probs=234.8
Q ss_pred ccCCCCCCceeEEeecCc-eeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeE
Q psy11701 400 VPLEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~~~~-~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~ 478 (745)
.|+.+|.++++.. .+.+ ++.|+|+++.. +.+.+|.|+|+.............+ ......+.|.+|.+++.|.|
T Consensus 1 vP~~~P~~l~~~~-~~~~~sv~l~W~~~~~----~~~~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~ 74 (375)
T 3t1w_A 1 MPLSPPTNLHLEA-NPDTGVLTVSWERSTT----PDITGYRITTTPTNGQQGNSLEEVV-HADQSSCTFDNLSPGLEYNV 74 (375)
T ss_dssp -CCCCCEEEEEEE-ETTTTEEEEEEECCSC----SSCCEEEEEEEETTCTTSCCEEEEE-ETTCCEEEECCCCTTCCEEE
T ss_pred CCCCCCCccEEEe-cCCCeEEEEEEeCCCC----CCeeeEEEEEEECCCCCCcceeEEc-CCCccEEEEcCCcCCCEEEE
Confidence 3789999999988 7888 99999998532 4588999999887654444444555 56788999999999999999
Q ss_pred EEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccccccc
Q psy11701 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558 (745)
Q Consensus 479 ~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~ 558 (745)
+|+|.|..|.+.+. ...+...+|. |.++.+...+.+++.|+|++|. ++.+.+|.|+|+..+........
T Consensus 75 ~V~a~~~~g~s~~~---~~~~~~~~p~-p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~----- 143 (375)
T 3t1w_A 75 SVYTVKDDKESVPI---SDTIIPEVPQ-LTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFED----- 143 (375)
T ss_dssp EEEEEETTEECCCE---EEEECCCCCC-CSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCCSCEEE-----
T ss_pred EEEEEcCCCCCCcE---EeeEcCCCCC-CceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCCceeEE-----
Confidence 99999988776553 3444556664 8899999999999999999875 46899999999976543221111
Q ss_pred ccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccCCCcceEE
Q psy11701 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638 (745)
Q Consensus 559 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~ 638 (745)
.......++.+.+|.|++.|.|+|.|.|..|.|.++..........+.++.+....++++.|+|++++ ++.+.+|.
T Consensus 144 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~p~~l~~~~~~~~si~l~W~~p~----~~~i~~Y~ 219 (375)
T 3t1w_A 144 FVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFL 219 (375)
T ss_dssp EECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSCEEEEEECCS----SCCCCEEE
T ss_pred EcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCCCCceeEEEecccCEEEEEEcCCC----CCCccEEE
Confidence 11556789999999999999999999999999999876544433333344444567899999999764 35689999
Q ss_pred EEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCe---------------------------
Q psy11701 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSI--------------------------- 691 (745)
Q Consensus 639 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~--------------------------- 691 (745)
|.|+..+....+.... .......+++.+|.+++.|.|+|.|....+.+....
T Consensus 220 v~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W 298 (375)
T 3t1w_A 220 VRYSPVKNEEDVAELS-ISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHW 298 (375)
T ss_dssp EEEEEGGGTTCCEEEE-ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSCEEEEE
T ss_pred EEEEeCCCCCCcEEEE-cCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCCCCccEeeeccCCEEEEEE
Confidence 9999765443333222 234458899999999999999999833322221110
Q ss_pred ----------------------EEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCc
Q psy11701 692 ----------------------RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732 (745)
Q Consensus 692 ----------------------~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~ 732 (745)
.......+..+++.|.+|.|++.|.|+|+|.|.+|.|++..
T Consensus 299 ~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s 361 (375)
T 3t1w_A 299 IAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI 361 (375)
T ss_dssp ECCSSCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CCCCcceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCcee
Confidence 11133356788999999999999999999999999998875
No 47
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=2.6e-31 Score=275.87 Aligned_cols=261 Identities=26% Similarity=0.368 Sum_probs=214.7
Q ss_pred eccceeEecCCcEEEEEEE-eecCCCeeEEEECCEecC--CCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeee--
Q psy11701 39 TRKKEVALRNKKVELFCIF-GGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA-- 113 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W~~~~~~i~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~-- 113 (745)
.+....+.+|++++|.|.+ .+.|.+.+.|+|++.++. ...+......++.|.|.+++.+|+|.|+|.+.+..|..
T Consensus 107 ~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~ 186 (382)
T 1cs6_A 107 ERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITK 186 (382)
T ss_dssp CCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEE
T ss_pred CCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccc
Confidence 4567789999999999996 567888999999987753 34455555555789999999999999999999865321
Q ss_pred --EEEEEEEEEE------ecCeEEe-cCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEE
Q psy11701 114 --KSYSIDLSVL------AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184 (745)
Q Consensus 114 --~~~~~~l~V~------~~p~~~~-~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i 184 (745)
.+..+.|.|. .+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ........|.|
T Consensus 187 ~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-----~~~~~~~~L~i 261 (382)
T 1cs6_A 187 SVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS-----KWLSSEPLLHI 261 (382)
T ss_dssp EEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC-----CCSBSSSEEEE
T ss_pred eeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc-----EEecCCcEEEE
Confidence 1223445543 2455544 36678899999999999999999999999998877653 23345678999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceE
Q psy11701 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~ 264 (745)
.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.....
T Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 340 (382)
T 1cs6_A 262 QNVDFEDEGTYECEAENIKGRDTYQGRIIIHA-QPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNR 340 (382)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSS
T ss_pred ccCChhhCEEEEEEEEcCCCeEEEEEEEEEec-CCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCce
Confidence 99999999999999999999988888888875 77888888888999999999999999999999999999998865433
Q ss_pred EEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 265 ~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
.....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 341 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 341 IEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 33456789999999999999999999999999988888875
No 48
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=100.00 E-value=2.7e-32 Score=271.44 Aligned_cols=261 Identities=18% Similarity=0.261 Sum_probs=208.0
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
..|+.+...+.+..+.+|++++|.|.+.| .+.|+|++..+ ......+..|.|.+++.+|+|.|+|.+.+
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~-----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n-- 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN-----EMVENKKNEWIQEKAEATRTGTYTCSNSN-- 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS-----CEEEECSSEEEETTCCGGGCEEEEEEESS--
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce-----eeecCCCceEEEeccCHHhCeEEEEEeeC--
Confidence 34556667889999999999999999987 89999999877 12223457999999999999999999988
Q ss_pred eeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCC-CeEEE-EeCCEeccCCCCCCce-eecCceEEEccC
Q psy11701 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE-PEIHW-VHNGKPISQAPPNPRR-KVGPNRITIENL 187 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~-~~v~W-~~~g~~~~~~~~~~~~-~~~~~~L~i~~v 187 (745)
|. +..+.|.|..+|.+...+....+.+|+.+.|.|.+.+ |. +.++| +++|..+... .+. ....+.|.|.++
T Consensus 79 g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~---~~~~~~~~~~L~i~~v 152 (290)
T 2o26_X 79 GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD---LTFVPNPKAGITIKNV 152 (290)
T ss_dssp SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT---CEEEEETTTEEEEESC
T ss_pred Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC---CceeeCCCCCEEEecc
Confidence 43 5678899998887777777888999999999999996 77 89999 5688777532 232 234578999999
Q ss_pred CCCCCE-EEEEEEEeCCceEEE-EEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeecCCCe-EEEeeCCEEc--
Q psy11701 188 RKSDTG-NYGCNATNSLGYVYK-DVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE-VNWIHNQKEL-- 259 (745)
Q Consensus 188 ~~~d~G-~Y~C~~~~~~g~~~~-~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~-- 259 (745)
..+|+| .|+|.|.|..+.... .+.|.|.. .+|.+...+....+.+|+.++|.|.+.+.|.+. +.|++++..+
T Consensus 153 ~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~ 232 (290)
T 2o26_X 153 KRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQH 232 (290)
T ss_dssp CGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEE
T ss_pred cHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCcc
Confidence 999999 999999998655333 36777652 578888888888899999999999999999885 9999988762
Q ss_pred --cC-ceE------EEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 260 --TG-GRY------TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 260 --~~-~~~------~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
.. ... .....+.|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 233 IAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred ceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 11 111 12334579999999999999999999999999888888887654
No 49
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=9.4e-32 Score=279.96 Aligned_cols=382 Identities=13% Similarity=0.099 Sum_probs=215.9
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEE------------EEEEec---CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEE
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSID------------LSVLAA---PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~------------l~V~~~---p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~ 160 (745)
..|.|.|+|.+.+..+...+..+. |..... +.+...|....+.+|+++.|.|.+.+.|.+.+.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~ 83 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWV 83 (423)
T ss_dssp ----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEE
Confidence 468899999998764433222211 222221 24556667889999999999999999999999999
Q ss_pred eCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEE
Q psy11701 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240 (745)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C 240 (745)
+++..+...............|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. +|.+. ......+..|+.+.|.|
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-~p~~~-~~~p~~~~~~~~~~L~C 161 (423)
T 3qs7_E 84 FKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN-TLLYT-LRRPYFRKMENQDALVC 161 (423)
T ss_dssp ETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC------C-EEEEEEEECSSSSCEEE
T ss_pred ECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEec-Ccccc-ccCCcEeccCCceEEEE
Confidence 99987763221110111123699999999999999999999999888888888874 44332 11122345688889999
Q ss_pred EEeecCCCeEEEeeCCEEccCceE----EEeecCcEEEcccCCCCCEEEEEEEEeCCceEEE-EEEEEEeecceeecCCC
Q psy11701 241 RVFGAPKPEVNWIHNQKELTGGRY----TILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPE 315 (745)
Q Consensus 241 ~~~~~p~~~i~W~~~~~~~~~~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~-~~~l~v~~~p~~~~~p~ 315 (745)
.+.|.|.+.|.|++++..+..... .+..... .+ ...|+|.|+|.|.|..|.... .+.|.|..+|.. .+.
T Consensus 162 ~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~-~l---~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~ 235 (423)
T 3qs7_E 162 ISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEK-VL---HELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLP 235 (423)
T ss_dssp EEEESSCCEEEEEEC-------------CEEECCS-EE---CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--STT
T ss_pred EEeeecCCeEEEEECCCCCccccccccccccccce-EE---ecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCC
Confidence 999999999999998875432110 0111111 11 568999999999999988644 366777665544 445
Q ss_pred cEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCC---eE----EEcCCeEEEEecCCCCCCEEEEEEEEeCCc
Q psy11701 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RF----VQSNDYSLTVTKSSELDSGQYTCRAQTELD 388 (745)
Q Consensus 316 ~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~---~~----~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 388 (745)
...+..|+.+.|.|.+.+.++ .+.+.|++++..+...... .+ .......|.|..+...|.|.|+|.|.|.
T Consensus 236 ~~~v~~G~~v~L~C~~~g~~p-~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~-- 312 (423)
T 3qs7_E 236 QLFLKVGEPLWIRCKAVHVNH-GFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-- 312 (423)
T ss_dssp EEEEETTSCEEEEEEEEESSS-CCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE--
T ss_pred ceEEeCCCeEEEEEEEEcCCC-CcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC--
Confidence 677899999999999998432 2689999998876421100 00 0122347999999999999999999987
Q ss_pred eEEEEEEEEEeccCCC---CCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccC--cee
Q psy11701 389 FIEAQATLTVQVPLEA---PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG--EST 463 (745)
Q Consensus 389 ~~~~~~~l~v~~pp~~---P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~--~~~ 463 (745)
....+.|.|..+|.. |....+ .+..+..+.|.|.....+. -.+ .|.+++.. +.. .. ...
T Consensus 313 -~~~~~~L~V~~~p~i~~~~~~~~~-~v~~G~~v~l~C~~~g~P~-------p~i-~W~k~g~~-----l~~-~~~~~~~ 376 (423)
T 3qs7_E 313 -PSQSALVTIVEKGFINATNSSEDY-EIDQYEEFCFSVRFKAYPQ-------IRC-TWTFSRKS-----FPC-EQKGLDN 376 (423)
T ss_dssp -EEEEEEEEEESSCEEEEC---CEE-CCCTTCCCCEEEEEEEESC-------CEE-EEEETTEE-----EEC-BCCBCSS
T ss_pred -CCceEEEEEEeCCcceEcCCCccE-EecCCCeEEEEEEEEEcCC-------CeE-EEEECCEE-----CCC-ccccccC
Confidence 667777888755421 211111 1144567788887632111 133 34443311 111 00 001
Q ss_pred EEEe--cccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCC
Q psy11701 464 TTEV--DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507 (745)
Q Consensus 464 ~~~i--~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p 507 (745)
.+.+ ..+.......|.|.|.|..|....+..+.+. +.|++|
T Consensus 377 ~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~---~~p~~~ 419 (423)
T 3qs7_E 377 GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR---SGTKHH 419 (423)
T ss_dssp SSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----------
T ss_pred CcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEe---cCCccc
Confidence 1222 3445567888999999998876544444443 444444
No 50
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=8.4e-33 Score=293.88 Aligned_cols=351 Identities=17% Similarity=0.219 Sum_probs=229.6
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEe---c--------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVP---I--------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~---i--------------~~~~~~~~~~----~~~~L~ 90 (745)
++..+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +.. + ....|+.+.. ...+|.
T Consensus 3 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (457)
T 1hzh_H 3 QLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYME 82 (457)
T ss_dssp EEEECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred eEecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEE
Confidence 34556678899999999999998876 678999984 321 1 0134665432 224899
Q ss_pred EccCCCCCCEEEEEEEEeCCe---------e--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVG---------E--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PE 154 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g---------~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~ 154 (745)
|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+...+....+.+|+.+.|.|.+.|. |.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 162 (457)
T 1hzh_H 83 LRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (457)
T ss_dssp ECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSC
T ss_pred ECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCC
Confidence 999999999999999988754 1 122335677764 5666555544557899999999999886 65
Q ss_pred -CeEEEEeCCEeccCCCC-----CCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee------------
Q psy11701 155 -PEIHWVHNGKPISQAPP-----NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA------------ 216 (745)
Q Consensus 155 -~~v~W~~~g~~~~~~~~-----~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~------------ 216 (745)
+.+.|++++..+..... ........+.|.|.++..+| |.|+|.|.|..+.......+.+..
T Consensus 163 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~ 241 (457)
T 1hzh_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPA 241 (457)
T ss_dssp CCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCC
T ss_pred CeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCC
Confidence 79999999965431100 00001112479999999999 999999999877655444443321
Q ss_pred ----cCCee-eeCCCceE-EecCceEEEEEEEeecCCC----eEEEeeCCEEccCceE---EEeecCcEEEccc---CCC
Q psy11701 217 ----HAPEI-TEAPKDEY-TVDGKTVVLTCRVFGAPKP----EVNWIHNQKELTGGRY---TILETGDLKITDV---AFA 280 (745)
Q Consensus 217 ----~~p~~-~~~~~~~~-v~~g~~~~l~C~~~~~p~~----~i~W~~~~~~~~~~~~---~~~~~~~l~i~~~---~~~ 280 (745)
.+|.+ ...|.... +.+|+.++|.|.+.+.+++ .+.|++++..+..... ....++.|.+... ...
T Consensus 242 ~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~ 321 (457)
T 1hzh_H 242 PELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQ 321 (457)
T ss_dssp CCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHH
T ss_pred ccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHH
Confidence 13444 33443333 5679999999999987553 8999999987754321 2233455555432 244
Q ss_pred C---CEEEEEEEEeCCceEEEEEEEE----EeecceeecCC-CcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccC
Q psy11701 281 D---SGEYTCFARNKLGTAQGSGSLT----VKEHTHITDQP-EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352 (745)
Q Consensus 281 d---~G~Y~C~~~n~~g~~~~~~~l~----v~~~p~~~~~p-~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~ 352 (745)
| .|.|+|.|.|..+.......+. +..+|.+...+ ....+..|+ +.|.|.+.+.+++.+.+.|++++..+..
T Consensus 322 d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 400 (457)
T 1hzh_H 322 DWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENN 400 (457)
T ss_dssp HHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred HccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcc
Confidence 4 9999999998755433332332 23445443332 222223444 9999999998665579999999988752
Q ss_pred CCCCeEEEcCCe------EEEEecCCCCCCEEEEEEEEeCCc
Q psy11701 353 ESEPRFVQSNDY------SLTVTKSSELDSGQYTCRAQTELD 388 (745)
Q Consensus 353 ~~~~~~~~~~~~------~l~i~~~~~~~~g~y~c~a~n~~g 388 (745)
..........++ .|.+......|.|.|+|.|.|...
T Consensus 401 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 401 YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred eeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 211111222222 345555545678999999999764
No 51
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=2.2e-30 Score=258.01 Aligned_cols=272 Identities=23% Similarity=0.385 Sum_probs=218.7
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecC-CCeEEEEe-CCEeccCCCCCCcee---ecCceEEEccCCCCCCEEEEEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLP-EPEIHWVH-NGKPISQAPPNPRRK---VGPNRITIENLRKSDTGNYGCNA 199 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~-~g~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~~ 199 (745)
++.+...|....+.+|+++.|.|.+.+.+ .+.+.|++ +|..+.......... ...+.|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 56778889999999999999999999876 68999999 787776432221111 13468999999999999999999
Q ss_pred EeCCce-EEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEcc---CceEEEeecCcEEEc
Q psy11701 200 TNSLGY-VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKIT 275 (745)
Q Consensus 200 ~~~~g~-~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~ 275 (745)
.|..|. ....+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..++....++.|.|.
T Consensus 82 ~n~~g~~~~~~~~l~v~~-~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQ-KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 160 (291)
T ss_dssp ECTTSCEEEEEEEEEEEC-CSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEET
T ss_pred EcCCCCeeEEEEEEEeec-cccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEc
Confidence 998854 44567777764 7788888888899999999999999999999999999988764 345666677899999
Q ss_pred ccCCCCCEEEEEEEEeCCce--EEEEEEEEEeecceeecCCC--cEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeecc
Q psy11701 276 DVAFADSGEYTCFARNKLGT--AQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351 (745)
Q Consensus 276 ~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~~p~~~~~p~--~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~ 351 (745)
++...|+|.|+|.+.|..+. ....+.+.|..+|.+...+. ...+..|+.+.|.|.+.+.|. +.+.|++++..+.
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~g~~~~ 238 (291)
T 1qz1_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPE--PTMSWTKDGEPIE 238 (291)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESC--CEEEEEETTEECC
T ss_pred cCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCC--CcEEEEECCEECc
Confidence 99999999999999987643 34567788877777665543 345678999999999999886 6899999999876
Q ss_pred CCCC--CeEEE-cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 352 FESE--PRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 352 ~~~~--~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
.... .++.. .....|.|..+...|.|.|+|.|.|..|.....+.|.|.
T Consensus 239 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 239 NEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp CC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 4321 23333 334689999999999999999999999998888888875
No 52
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=100.00 E-value=7.3e-31 Score=280.09 Aligned_cols=351 Identities=15% Similarity=0.188 Sum_probs=231.6
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEecC-----------------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPIN-----------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i~-----------------~~~~~~~~~----~~~~L~ 90 (745)
.+..|..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+.. ...+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (475)
T 1iga_A 4 LLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMG 83 (475)
T ss_pred eeccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEE
Confidence 34567788899999999999998764 568999985 22110 124555432 234899
Q ss_pred EccCCCCCCEEEEEEEEeCCee-----eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CC-C-eEE
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGE-----AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PE-P-EIH 158 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~-----~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~-~v~ 158 (745)
|.+++.+|+|.|+|.+.+..|. .....+.|.|.. +|.+...+.. .+.+|+.+.|.|.+.|. |. + .|.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~L~C~~~g~~P~~p~~v~ 162 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVVIACLVQGFFPQEPLSVT 162 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEEEEEEEeeecCCCceEEE
Confidence 9999999999999999987642 122445677763 4555444322 23689999999999986 65 4 999
Q ss_pred EEeCCEeccCCCCC------CceeecCceEEEccCCCCCCEEEEEEEEeCCceE-EEEEEEEEee---------------
Q psy11701 159 WVHNGKPISQAPPN------PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVLA--------------- 216 (745)
Q Consensus 159 W~~~g~~~~~~~~~------~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~-~~~~~l~v~~--------------- 216 (745)
|++++......... .......+.|.|..+..+|+|.|+|.|.|..+.. ...+.+.|..
T Consensus 163 W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~ 242 (475)
T 1iga_A 163 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSP 242 (475)
T ss_pred EcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCC
Confidence 99988543211000 0011112468898999999999999999987642 2223322210
Q ss_pred --cCCee-eeCCCceEEecCceEEEEEEEeecCC---CeEEEeeCCEEccCc---eEE------EeecCcEEEcccCCCC
Q psy11701 217 --HAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPK---PEVNWIHNQKELTGG---RYT------ILETGDLKITDVAFAD 281 (745)
Q Consensus 217 --~~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~~~---~~~------~~~~~~l~i~~~~~~d 281 (745)
.+|.+ ...|....+.+|+.++|.|.+.+.++ +.+.| +++ .+... ... ....+.|.|.++..+|
T Consensus 243 ~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~-~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d 320 (475)
T 1iga_A 243 SCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPS-SGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNH 320 (475)
T ss_pred CCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CCC-CcCCccccCceECCCCCEEEEEEEEEchHHhcc
Confidence 24444 33344444688999999999998754 58999 433 33211 000 1133469999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEE---eecceeecCCC-cEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCC--C
Q psy11701 282 SGEYTCFARNKLGTAQGSGSLTV---KEHTHITDQPE-DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES--E 355 (745)
Q Consensus 282 ~G~Y~C~~~n~~g~~~~~~~l~v---~~~p~~~~~p~-~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~--~ 355 (745)
.|.|+|.|.|..+.......+.+ ..+|.+...+. ...+..|+.+.|.|.+.+.+++.+.+.|++++..+.... .
T Consensus 321 ~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 400 (475)
T 1iga_A 321 GKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLT 400 (475)
T ss_pred CCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceee
Confidence 99999999998887544444432 44555443332 223567889999999999765557999999998876331 0
Q ss_pred CeEEEc---CC------eEEEEecCCCCCCEEEEEEEEeCCce
Q psy11701 356 PRFVQS---ND------YSLTVTKSSELDSGQYTCRAQTELDF 389 (745)
Q Consensus 356 ~~~~~~---~~------~~l~i~~~~~~~~g~y~c~a~n~~g~ 389 (745)
...... .+ +.|.|......+.|.|+|.|.|....
T Consensus 401 ~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 401 WASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred cccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 001111 12 34666666667899999999997653
No 53
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=100.00 E-value=7.2e-33 Score=281.88 Aligned_cols=273 Identities=28% Similarity=0.531 Sum_probs=142.1
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeec-CCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGT-PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
.|...+..+.+..+.+|++++|.|.+.+. |.+.+.|+|+|..|....++.+ .+++|.|.+++.+|+|.|+|.+.+.
T Consensus 7 ~p~p~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~- 83 (334)
T 1ry7_B 7 VPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV--GPQRLQVLNASHEDSGAYSCRQRLT- 83 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe--ccceEEEeecccccCEEEEEEEEeC-
Confidence 34444555899999999999999999877 6789999999999987666654 3568999999999999999999987
Q ss_pred eeeEEEEEEEEEEec----------------------CeEEe----cCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCE
Q psy11701 111 GEAKSYSIDLSVLAA----------------------PYFTV----EPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164 (745)
Q Consensus 111 g~~~~~~~~l~V~~~----------------------p~~~~----~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~ 164 (745)
|... ..+.|.|... |.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|+++|.
T Consensus 84 ~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~ 162 (334)
T 1ry7_B 84 QRVL-CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGR 162 (334)
T ss_dssp ------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTB
T ss_pred CeEE-EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCE
Confidence 5433 5677777654 33321 1234678899999999999999999999999999
Q ss_pred eccCCCCCCc--eeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecC---Ceeee-CCCceEEecCceEEE
Q psy11701 165 PISQAPPNPR--RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA---PEITE-APKDEYTVDGKTVVL 238 (745)
Q Consensus 165 ~~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~---p~~~~-~~~~~~v~~g~~~~l 238 (745)
.+........ .......|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+ |.+.. .+....+.+|+.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l 242 (334)
T 1ry7_B 163 EFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEF 242 (334)
T ss_dssp CCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEE
T ss_pred ECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEE
Confidence 8875433222 22345689999999999999999999999998888888887533 33332 356778899999999
Q ss_pred EEEEeecCCCeEEEee----CCEEccCc-e--EEEeec----------CcEEEcccCCCCCEEEEEEEEeCCceEEEEEE
Q psy11701 239 TCRVFGAPKPEVNWIH----NQKELTGG-R--YTILET----------GDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301 (745)
Q Consensus 239 ~C~~~~~p~~~i~W~~----~~~~~~~~-~--~~~~~~----------~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 301 (745)
.|.+.+.|.+.+.|++ ++..+... . +..... ..|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 243 ~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 322 (334)
T 1ry7_B 243 HCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAW 322 (334)
T ss_dssp CCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEE
T ss_pred EEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEE
Confidence 9999999999999999 55554321 1 111111 26999999999999999999999999999999
Q ss_pred EEEeecc
Q psy11701 302 LTVKEHT 308 (745)
Q Consensus 302 l~v~~~p 308 (745)
|.|...+
T Consensus 323 l~V~~~~ 329 (334)
T 1ry7_B 323 LVVLPAE 329 (334)
T ss_dssp EEEECSC
T ss_pred EEEEECC
Confidence 9998654
No 54
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.98 E-value=4.1e-31 Score=276.90 Aligned_cols=270 Identities=26% Similarity=0.443 Sum_probs=216.5
Q ss_pred CCeeEeeccceeEecCCcEEEEEEE-eecCCCeeEEEECCE-ecCCCCCeEeccCCcEEEEccCCCCC-CEEEEEEEEeC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIF-GGTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSNG 109 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W~~~~~-~i~~~~~~~~~~~~~~L~i~~~~~~d-~G~Y~C~~~~~ 109 (745)
|......+....+.+|++++|.|.+ .+.|.+.+.|++++. .+....++.... ++.|.|.+++.+| .|.|+|.+.+.
T Consensus 116 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~~G~Y~C~a~n~ 194 (404)
T 3p3y_A 116 PLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGH-NGDLYFSNVMLQDMQTDYSCNARFH 194 (404)
T ss_dssp CCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECT-TSCEEESSCCSGGGSSCBEEEEECT
T ss_pred CccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcC-CCcEEEEeeeeccCCcceEEEEEec
Confidence 4444444566789999999999999 888999999999874 444455555543 4579999999999 59999999987
Q ss_pred CeeeEE--EEEEEEEEe-------cCeEEec---CceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee
Q psy11701 110 VGEAKS--YSIDLSVLA-------APYFTVE---PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177 (745)
Q Consensus 110 ~g~~~~--~~~~l~V~~-------~p~~~~~---~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~ 177 (745)
.+.... ..+.|.|.. +|.+... +....+.+|+++.|.|.+.+.|.+.+.|+++|..+.... .....
T Consensus 195 ~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~ 272 (404)
T 3p3y_A 195 FTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDK--AKFEN 272 (404)
T ss_dssp TTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTT--EEEEG
T ss_pred cccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCc--ccccc
Confidence 765432 234556653 2333222 234568999999999999999999999999999886432 13334
Q ss_pred cCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCE
Q psy11701 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257 (745)
Q Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~ 257 (745)
.++.|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++.
T Consensus 273 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~ 351 (404)
T 3p3y_A 273 FNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGE 351 (404)
T ss_dssp GGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE-EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTE
T ss_pred cCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC-CCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCE
Confidence 467999999999999999999999999988888998885 7788888888999999999999999999999999999999
Q ss_pred EccCce---EEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 258 ELTGGR---YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 258 ~~~~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
.+.... .....++.|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 352 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 352 PLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 885432 2233556899999999999999999999999999988888754
No 55
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.98 E-value=3.1e-31 Score=263.56 Aligned_cols=281 Identities=15% Similarity=0.209 Sum_probs=204.7
Q ss_pred cCCCCCCceeEE----eecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcce
Q psy11701 401 PLEAPSNFTLIQ----VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476 (745)
Q Consensus 401 pp~~P~~~~~~~----~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y 476 (745)
+|..|.++.... ..+.+++.|.|+++++...++.+.+|.|+|+...... .... .....+.+|.+++.|
T Consensus 3 ~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~---~~~~-----~~~~~~~~l~p~t~Y 74 (290)
T 3l5i_A 3 RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHL---QNYT-----VNATKLTVNLTNDRY 74 (290)
T ss_dssp CCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCC---EEEE-----ESSSEEEEEECSSCE
T ss_pred CCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCc---eeEe-----cCCcEEEEEcCCceE
Confidence 456666665432 0235899999998766678899999999987765422 1121 234467889999999
Q ss_pred eEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccccc
Q psy11701 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556 (745)
Q Consensus 477 ~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~ 556 (745)
.|+|.|.|..|.|+++..........+|.+|.++.+...+ ++|.|+|++|.. .|.+|.|+|+...........+..
T Consensus 75 ~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~~~~~~~~~~~~~~ 150 (290)
T 3l5i_A 75 LATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCVLSDKAPCITDWQQ 150 (290)
T ss_dssp EEEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS---CCCEEEEEEEEECSSSCCCCEEEE
T ss_pred EEEEEEEcCCCCCCCceEEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEECCCCCCCCcCeEE
Confidence 9999999999999877533222222456677788877765 699999999865 799999999987654321111111
Q ss_pred ccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCC---CCCCCCCCCcceeEEEeecCccccCCC
Q psy11701 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD---NVEGRGSTPNNLVISWTAMPEIEHNAP 633 (745)
Q Consensus 557 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~---~~~~~~~~p~~~~v~W~~~~~~~~~g~ 633 (745)
+.......+.+.+|.|++.|.|+|.|.|..|.|+++..........+. .+.+.....+++.|+|++++....+|.
T Consensus 151 --~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~ 228 (290)
T 3l5i_A 151 --EDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGF 228 (290)
T ss_dssp --EETTCSEEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSC
T ss_pred --ccCCCcceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCE
Confidence 224566788899999999999999999999999864433332222221 222223456899999998888889999
Q ss_pred cceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCC
Q psy11701 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 713 (745)
Q Consensus 634 i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~ 713 (745)
|.+|+|+|+..++.. ......+..+++.|.+|.|++
T Consensus 229 i~~Y~v~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~L~p~t 264 (290)
T 3l5i_A 229 IRNYTIFYRTIIGNE--------------------------------------------TAVNVDSSHTEYTLSSLTSDT 264 (290)
T ss_dssp CCEEEEEEEETTSCC--------------------------------------------EEEEEETTCSEEEECSCCTTC
T ss_pred EEEEEEEEEeCCCCe--------------------------------------------EEEEeCCCceEEEeCCCCCCC
Confidence 999999998652210 011125678899999999999
Q ss_pred cceeEEEEecCcccCCCCcceEEeCCC
Q psy11701 714 KNFARVLAFNGAYNGPPSEIISFVTPE 740 (745)
Q Consensus 714 ~Y~~~v~A~~~~G~g~~s~~~~~~t~~ 740 (745)
.|.|+|+|.|.+| |++|+.+.|+|+.
T Consensus 265 ~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 265 LYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred EEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 9999999999999 8999999999974
No 56
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.98 E-value=5.1e-31 Score=275.22 Aligned_cols=354 Identities=18% Similarity=0.234 Sum_probs=251.8
Q ss_pred EEEEecCeEEecCceeEeeCCCeEEEEEEEee-cCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEE
Q psy11701 120 LSVLAAPYFTVEPEFINAAEEETVTFECKASG-LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198 (745)
Q Consensus 120 l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 198 (745)
|.|..+|.|...|....+.+|+++.|.|.+.+ .|.+.++|+|+|..+............+++|.|.+++.+|+|.|+|.
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCF 80 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEE
Confidence 45778999999999999999999999999998 88899999999998875443222334567899999999999999999
Q ss_pred EEeCCceEEE-EEEEEEee-cCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCC---EEcc-----CceEEEe
Q psy11701 199 ATNSLGYVYK-DVYVNVLA-HAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQ---KELT-----GGRYTIL 267 (745)
Q Consensus 199 ~~~~~g~~~~-~~~l~v~~-~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~---~~~~-----~~~~~~~ 267 (745)
+.|..|.... .+.+.+.. ..|.+ .+....+.+|+.++|.|.+ .+.|.+.+.|++++ .... ..++...
T Consensus 81 a~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 1bih_A 81 AETPAGVASSRVISFRKTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAG 158 (395)
T ss_dssp EEETTEEEECCCEEEEEEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEEC
T ss_pred EEeCCCeEEeEEEEEEEEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEc
Confidence 9998887652 24444432 12333 2345567799999999995 78899999999975 2111 4566666
Q ss_pred ecCcEEEcccCCCCCE---EEEEEEEeCCceEEEEEEEEE---ee----------cceeecCCCcEEEecCCeEEEEEEE
Q psy11701 268 ETGDLKITDVAFADSG---EYTCFARNKLGTAQGSGSLTV---KE----------HTHITDQPEDYEVEAGQSATFRCNA 331 (745)
Q Consensus 268 ~~~~l~i~~~~~~d~G---~Y~C~~~n~~g~~~~~~~l~v---~~----------~p~~~~~p~~~~~~~g~~~~l~C~~ 331 (745)
.++.|.|.++...|+| .|+|.+.|..+.......... .. .|.+ .+....+..|+.+.|.|.+
T Consensus 159 ~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~ 236 (395)
T 1bih_A 159 PDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMY 236 (395)
T ss_dssp TTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEE
T ss_pred CCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEe
Confidence 7789999999999999 999999998887433222211 11 1222 2456778999999999999
Q ss_pred EecCCCCcEEEEeeCCeeccCCCCCeEEEc---CCeEEEEecCCCCCCEEEEEEEEeCCceEEE-EEEEEEeccCC---C
Q psy11701 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQS---NDYSLTVTKSSELDSGQYTCRAQTELDFIEA-QATLTVQVPLE---A 404 (745)
Q Consensus 332 ~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~-~~~l~v~~pp~---~ 404 (745)
.+.|. +.+.|++++..+......++... ....|.|..+...|.|.|+|.|.|..|.... .+.|.|..+|. .
T Consensus 237 ~g~p~--~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~ 314 (395)
T 1bih_A 237 GSNPM--GYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQK 314 (395)
T ss_dssp ECSSC--CCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEEC
T ss_pred ccCCC--CeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccC
Confidence 98886 56999999988765433444322 2237999999999999999999999998655 78888876653 2
Q ss_pred CCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEec
Q psy11701 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484 (745)
Q Consensus 405 P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n 484 (745)
|.. .. .+..+..+.|.|.....+.. .+ .|..++.......+.+ ....+.|.++...+...|.|.|.|
T Consensus 315 ~~~-~~-~~~~g~~~~l~C~~~g~p~p-------~v-~W~~~g~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N 381 (395)
T 1bih_A 315 PEK-VI-VVKQGQDVTIPCKVTGLPAP-------NV-VWSHNAKPLSGGRATV---TDSGLVIKGVKNGDKGYYGCRATN 381 (395)
T ss_dssp CCS-EE-EECTTSCEEEECEEEEESCC-------CC-EEEETTEECCSSSEEE---ETTEEEESSCCSTTCEEEEEEEEE
T ss_pred CCc-ce-EecCCCeEEEEEEECcccCC-------ee-EEEECCEECCCCceEE---ECCEEEEeeCCcccCEEEEEEEEc
Confidence 222 11 11566788898876311111 12 3333332111112233 123889999999999999999999
Q ss_pred CCCCCCCC
Q psy11701 485 GAYNGPPS 492 (745)
Q Consensus 485 ~~G~g~~S 492 (745)
..|....+
T Consensus 382 ~~G~~~~~ 389 (395)
T 1bih_A 382 EHGDKYFE 389 (395)
T ss_dssp TTEEEEEE
T ss_pred cCCCceEE
Confidence 98875433
No 57
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.98 E-value=1.7e-31 Score=270.35 Aligned_cols=266 Identities=15% Similarity=0.178 Sum_probs=204.9
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeec---------CCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCE-EE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGT---------PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG-SY 102 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~---------p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y 102 (745)
+.-.........+.+|++++|.|.+.+. |.+.++|+|++..+....+. ..+++|.|.+++.+|+| .|
T Consensus 29 ~~c~~~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~---~~~~~L~i~~v~~~D~Gs~Y 105 (329)
T 3oq3_B 29 PSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR---VKNGDLWIANYTSNDSHRRY 105 (329)
T ss_dssp TTSEEEEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT---EETTEEEESSCCGGGGGCCE
T ss_pred CCcccCCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce---eecceEEEcCCChHhCCCcE
Confidence 3344455577889999999999999874 55799999999877644443 22568999999999999 99
Q ss_pred EEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecC-CCeEEEEeCCEeccCCCCCCceeecCce
Q psy11701 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIHWVHNGKPISQAPPNPRRKVGPNR 181 (745)
Q Consensus 103 ~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 181 (745)
+|.|.+..|......+.+.+..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+|++..+... ..++...++.
T Consensus 106 ~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~--~~~~~~~~~~ 183 (329)
T 3oq3_B 106 LCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIID--GTKYSQSGQN 183 (329)
T ss_dssp EEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCS--SSSEEEETTE
T ss_pred EEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCC--CceEecCCCE
Confidence 999999887655444445555566655544445567899999999999999 8999999999988532 2344444789
Q ss_pred EEEccCCCCCCEEEEEEEEeC--CceEE----EEEEEEEeecCC---eeeeCCCceEEecCceEEEEEEEeecC---CC-
Q psy11701 182 ITIENLRKSDTGNYGCNATNS--LGYVY----KDVYVNVLAHAP---EITEAPKDEYTVDGKTVVLTCRVFGAP---KP- 248 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~--~g~~~----~~~~l~v~~~~p---~~~~~~~~~~v~~g~~~~l~C~~~~~p---~~- 248 (745)
|.|.+++.+|+|.|+|.|.|. .|... ..+.|.|...+. .+. .+....+.+|+.++|.|.+.+.| .+
T Consensus 184 L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i 262 (329)
T 3oq3_B 184 LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDV 262 (329)
T ss_dssp EEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCC
T ss_pred EEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCc
Confidence 999999999999999999986 54332 236777775441 222 66678899999999999999998 66
Q ss_pred eEEEeeCCEEc-cC-ceEEEe-------ecCcEEEcccCCCCCE-EEEEEEEeCCceEEEEEEEEE
Q psy11701 249 EVNWIHNQKEL-TG-GRYTIL-------ETGDLKITDVAFADSG-EYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 249 ~i~W~~~~~~~-~~-~~~~~~-------~~~~l~i~~~~~~d~G-~Y~C~~~n~~g~~~~~~~l~v 304 (745)
.+.|++++..+ .. .+.... ..+.|.|.+++.+|.| .|+|.|.|..|.....+.|.|
T Consensus 263 ~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 263 LIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 88999998874 22 221111 3457999999999999 999999999999888877766
No 58
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.98 E-value=1.2e-30 Score=259.67 Aligned_cols=267 Identities=17% Similarity=0.264 Sum_probs=208.1
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
+|+.+...+....+.+|++++|.|.+.+ .+.|++++... ........+.+|.|.+++.+|+|.|+|.+.+..+
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 75 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPY---WTLDPESPGSTLTTRNATFKNTGTYRCTELEDPM 75 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSS---SEECCCSSCCEEEESSCCGGGCEEEEEECCC---
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCce---EEEeccCCccEEEEeeeccccCEEEEEEEeccCC
Confidence 4566677888899999999999999986 49999876432 1223334567899999999999999999988766
Q ss_pred eeEEEEEEEEEEecCe-EEecCceeEeeCCCeEEEEEEEeecCCCe-EEEEe-CCEeccCCCCCCceeecCceEEEccCC
Q psy11701 112 EAKSYSIDLSVLAAPY-FTVEPEFINAAEEETVTFECKASGLPEPE-IHWVH-NGKPISQAPPNPRRKVGPNRITIENLR 188 (745)
Q Consensus 112 ~~~~~~~~l~V~~~p~-~~~~~~~~~v~~G~~~~l~C~~~~~p~~~-v~W~~-~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (745)
.. +..+.|.|..+|. +...+....+.+|+++.|.|.+.+.+.+. +.|++ ++..+.... ......++.|.|.++.
T Consensus 76 ~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~~L~i~~v~ 152 (289)
T 3ejj_X 76 AG-STTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKT--VYFFSPWRGFIIRKAK 152 (289)
T ss_dssp ---CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTC--CEEEETTTEEEESSCC
T ss_pred cc-eeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCc--cEEECCCCCEEEeecc
Confidence 54 4778899988776 57778888999999999999999866664 99986 666665221 1223456789999999
Q ss_pred CCCCEEEEEEEEe-CCceEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEee-cCCCeEEEeeCCEEccCce
Q psy11701 189 KSDTGNYGCNATN-SLGYVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFG-APKPEVNWIHNQKELTGGR 263 (745)
Q Consensus 189 ~~d~G~Y~C~~~~-~~g~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~ 263 (745)
.+|+|.|+|.+.+ ..+.....+.|.|.. .+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|++++..+....
T Consensus 153 ~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 232 (289)
T 3ejj_X 153 VLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPL 232 (289)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCE
T ss_pred cccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccC
Confidence 9999999999994 444455567788874 5788888888888889999999999998 6888999999998876443
Q ss_pred EEE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 264 YTI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 264 ~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
... ...+.|.|.+++.+|+|.|+|.|.|..|....++.|.+..++
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 233 NSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp EEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred CcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 221 224579999999999999999999999999999988886654
No 59
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.98 E-value=1.1e-30 Score=262.73 Aligned_cols=270 Identities=21% Similarity=0.269 Sum_probs=208.5
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCC-----eeEEEECCEec-------------CCCCCeEecc-------CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLP-----QTIWSKDGVPI-------------NPSDRISQGN-------YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~-----~v~W~~~~~~i-------------~~~~~~~~~~-------~~~~L~ 90 (745)
++..|.++.+..|++++|.|.+.+.+.+ +|+|+|++... ....++.+.. .+.+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4567788889999999999999877655 48999987543 2233343321 235799
Q ss_pred EccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQA 169 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~ 169 (745)
|.+++.+|+|.|+|.+.+..+...+..+.|.|..+|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~ 162 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNT 162 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccc
Confidence 999999999999999976544445577888888999888887777888999999999875 6899999999998776522
Q ss_pred CCC----CceeecCceEEEccCCCCCCEEEEEEEEeCCceE--EEEEEEEEeecCCeeeeC-CCceEEecCceEEEEEEE
Q psy11701 170 PPN----PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNVLAHAPEITEA-PKDEYTVDGKTVVLTCRV 242 (745)
Q Consensus 170 ~~~----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~--~~~~~l~v~~~~p~~~~~-~~~~~v~~g~~~~l~C~~ 242 (745)
... .......+.|.|.++..+|+|.|+|.|.|..+.. ...+.|.|.. +|.+... +....+..|+.++|.|.+
T Consensus 163 ~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~-~P~v~~~~~~~~~~~~g~~v~l~C~~ 241 (313)
T 4fqp_A 163 SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYY-PPEVSISGYDNNWYLGQNEATLTCDA 241 (313)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCE-EEEEEEECCCSCEETTCCCEEEEEEE
T ss_pred ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccccc-CCccccccccceeecCCCeEEEEEEe
Confidence 110 0011112468999999999999999999976553 3445565653 6666543 445566778999999999
Q ss_pred eecCCC-eEEEeeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 243 FGAPKP-EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 243 ~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
.|+|.+ .|.|++++..+.... ...+++|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 242 ~g~P~p~~v~W~~~~~~l~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 242 RSNPEPTGYNWSTTMGPLPPFA--VAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp EEESCCCEEEEEETTBSCCTTE--EEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred cCCCCCcEEEEEECCEECCCce--EEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 999988 699999998886543 3356789999999999999999999999999999999998754
No 60
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=6.3e-31 Score=264.90 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=200.7
Q ss_pred ceeEecCCcEEEEEEEe-ecCCCeeEEEECCEecCCCCCeEeccCC--cEEEEccCCCCCCEEEEEEEEeCCeeeEEEEE
Q psy11701 42 KEVALRNKKVELFCIFG-GTPLPQTIWSKDGVPINPSDRISQGNYG--KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI 118 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~i~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~ 118 (745)
...+.+|++++|.|... +.|.+.+.|+|++..+....++.+...+ .+|.|.+++.+|+|.|+|.+.+..|... ++
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~--s~ 87 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS--SY 87 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE--EE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE--EE
Confidence 45688999999999984 5788999999999999988887766544 6899999999999999999998877554 35
Q ss_pred EEEEEe------------cCeEEecCc-eeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCCCceee---cCce
Q psy11701 119 DLSVLA------------APYFTVEPE-FINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKV---GPNR 181 (745)
Q Consensus 119 ~l~V~~------------~p~~~~~~~-~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~~~~~~---~~~~ 181 (745)
.|.|.. +|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+........... ....
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~ 167 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 167 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEE
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEE
Confidence 566543 666555444 77899999999999998 889999999999999875432211111 1234
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceEEEEEEEE------------------EeecCCeeeeCCCceEEecCceEEEEEEEe
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN------------------VLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~------------------v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~ 243 (745)
|.|.+++.+|+|.|+|.+.+..+.......+. +...+|.+.... ...+.+|+.++|.|.+.
T Consensus 168 L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~ 246 (312)
T 2y23_A 168 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVA 246 (312)
T ss_dssp EEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEEEE
T ss_pred EEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecc-eEEEeCCCEEEEEEEEc
Confidence 99999999999999999987554443333321 011235554333 36788999999999999
Q ss_pred ecCCC-eEEEeeCCEEcc-CceEEEeec-CcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 244 GAPKP-EVNWIHNQKELT-GGRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 244 ~~p~~-~i~W~~~~~~~~-~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
+.|.+ .+.|++++..+. ..++..... ..|.|.++..+|+|.|+|.|.|..|.....+.|.+.
T Consensus 247 ~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 247 NIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp SCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred CCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 99888 999999998876 444443322 489999999999999999999999999888877653
No 61
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=6.2e-30 Score=254.70 Aligned_cols=273 Identities=27% Similarity=0.439 Sum_probs=213.6
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe-CCEeccCCCCCCceee-cCceEEEccCCCCCCEEEEEEEEe
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~-~g~~~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
.+|.+...+.+..+.+|+.+.|.|.+.+.|. .+.|++ +|..+........... ....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 3678888999999999999999999998775 999999 6776653221111111 124899999999999999999999
Q ss_pred CCceEE-EEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEcc---CceEEEeecCcEEEccc
Q psy11701 202 SLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKITDV 277 (745)
Q Consensus 202 ~~g~~~-~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~~~ 277 (745)
..|... ..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..++....++.|.|.++
T Consensus 82 ~~g~~~~~~~~l~v~~-~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v 160 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQ-KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNI 160 (291)
T ss_dssp SSSCEEEEEEEEEEEC-CCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTC
T ss_pred ccCceEEEEEEEEecC-CcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEec
Confidence 888764 456677764 6777777778889999999999999999999999999987764 45666667789999999
Q ss_pred CCCCCEEEEEEEEeCCce--EEEEEEEEEeecceeecCCC--cEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCC
Q psy11701 278 AFADSGEYTCFARNKLGT--AQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353 (745)
Q Consensus 278 ~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~~p~~~~~p~--~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~ 353 (745)
...|+|.|+|.+.|..+. ......+.+..+|.+...+. ...+..|+.+.|.|.+.+.|. +.+.|++++..+...
T Consensus 161 ~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~v~W~~~g~~~~~~ 238 (291)
T 2wim_A 161 NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPE--PAISWFRNGKLIEEN 238 (291)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSC--CEEEEEETTEECCCT
T ss_pred chhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCC--CeEEEEECCEECcCC
Confidence 999999999999998754 34566777777776655544 234578999999999998876 679999999987643
Q ss_pred CCCeEEE-cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccC
Q psy11701 354 SEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402 (745)
Q Consensus 354 ~~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp 402 (745)
.++.. .....|.|..+...|.|.|+|.|.|..|.....+.|.+..++
T Consensus 239 --~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 239 --EKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp --TTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred --ccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 23332 345789999999999999999999999999999999887664
No 62
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.97 E-value=2.4e-30 Score=262.91 Aligned_cols=277 Identities=20% Similarity=0.350 Sum_probs=204.8
Q ss_pred ccCCCCCeeEeeccceeEecCCcEEEEEEEeec----CCCeeEEEECC--E-------------ec--CCCCCeEec---
Q psy11701 28 QNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT----PLPQTIWSKDG--V-------------PI--NPSDRISQG--- 83 (745)
Q Consensus 28 ~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~----p~~~v~W~~~~--~-------------~i--~~~~~~~~~--- 83 (745)
+...+|..++..+..+.+.+|++++|.|.+.+. +.+.+.|+|++ . .+ ....|+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (331)
T 3u83_A 9 QMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPS 88 (331)
T ss_dssp ------------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCS
T ss_pred ccCCCCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccC
Confidence 344566777888889999999999999999776 44579999954 1 11 223566553
Q ss_pred cCCcEEEEccCCCCCCEEEEEEEE-eCCeeeEEEEEEEEEEecCeEEe--cCceeEeeCC---CeEEEEEE-EeecCCCe
Q psy11701 84 NYGKSLIIKHVEFSDQGSYTCEVS-NGVGEAKSYSIDLSVLAAPYFTV--EPEFINAAEE---ETVTFECK-ASGLPEPE 156 (745)
Q Consensus 84 ~~~~~L~i~~~~~~d~G~Y~C~~~-~~~g~~~~~~~~l~V~~~p~~~~--~~~~~~v~~G---~~~~l~C~-~~~~p~~~ 156 (745)
..+.+|.|.+++.+|+|.|+|.+. +..+. .+..+.|.|..+|.+.. .+....+.+| +.+.|.|. ..+.|.+.
T Consensus 89 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~ 167 (331)
T 3u83_A 89 FTDGTIRLSRLELEDEGVYICEFATFPTGN-RESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSV 167 (331)
T ss_dssp SSBCCEEECSCCGGGCEEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCE
T ss_pred CCCceEEEcccCcccCcEEEEEEEecCCCc-cEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCce
Confidence 234589999999999999999955 44554 44778999999887744 5666778888 88999998 78899999
Q ss_pred EEEEeCC--EeccCCC-CCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeee-eCCCceEEec
Q psy11701 157 IHWVHNG--KPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVD 232 (745)
Q Consensus 157 v~W~~~g--~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~-~~~~~~~v~~ 232 (745)
+.|++++ ....... .........+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+. ..+....+.+
T Consensus 168 i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~-~P~~~~~~~~~~~~~~ 246 (331)
T 3u83_A 168 VSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY-EPEVTIEGFDGNWYLQ 246 (331)
T ss_dssp EEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE-EEEEEEECCCSCCBTT
T ss_pred EEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec-CCeEEEecCCCceEeC
Confidence 9999953 2211000 0011111234688999999999999999999999888888888875 55555 4445556889
Q ss_pred CceEEEEEEEeecCCCe-EEEeeCCEEccCceEEEeecCcEEEc-ccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 233 GKTVVLTCRVFGAPKPE-VNWIHNQKELTGGRYTILETGDLKIT-DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 233 g~~~~l~C~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
|+.++|.|.+.+.|.+. +.|++++..+.... ....++|.|. ++..+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 247 g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 247 RMDVKLTCKADANPPATEYHWTTLNGSLPKGV--EAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp CCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred CCeEEEEEeCcCCCCCCEEEEEECCCcccccc--eecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 99999999999999997 99999998876542 2356789999 899999999999999999999999999887654
No 63
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=6.4e-30 Score=250.32 Aligned_cols=238 Identities=21% Similarity=0.275 Sum_probs=195.9
Q ss_pred eeEeeccceeEecCCcEEEEEEEeecCCC-eeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeee
Q psy11701 35 QQYVTRKKEVALRNKKVELFCIFGGTPLP-QTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113 (745)
Q Consensus 35 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~~-~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 113 (745)
.+...|.+..+.+|++++|.|.+.+.|.+ .+.|+|+|..+.. .+..|.|.+++.+|+|.|+|.+.+..+.
T Consensus 3 ~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~--------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s- 73 (262)
T 3rjd_A 3 VITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT--------STPSYRITSASVNDSGEYRCQRGLSGRS- 73 (262)
T ss_dssp EEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEESSSCCC-
T ss_pred eEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeec--------cCCeEEEecCCcccCeEEEEEEecCCcc-
Confidence 35577888899999999999999988887 9999999999863 3568999999999999999999875544
Q ss_pred EEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCC
Q psy11701 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDT 192 (745)
Q Consensus 114 ~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 192 (745)
..+.|.|..++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ....+.|.|.+++.+|+
T Consensus 74 --~~~~l~v~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~-------~~~~~~l~i~~~~~~d~ 143 (262)
T 3rjd_A 74 --DPIQLEIHRGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF-------FHWNSNLTILKTNISHN 143 (262)
T ss_dssp --CCEEEEEECSS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE-------EEECCCEEESSCCGGGC
T ss_pred --ccEEEEEeccc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc-------cCCCCeEEEEECChhhC
Confidence 34778887766 4445556678899999999999 6778889999999998752 23357899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeec--CCeeeeCCCceEEecCceEEEEEEEeecCC-C----eEEEeeCCEEccCceEE
Q psy11701 193 GNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPK-P----EVNWIHNQKELTGGRYT 265 (745)
Q Consensus 193 G~Y~C~~~~~~g~~~~~~~l~v~~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-~----~i~W~~~~~~~~~~~~~ 265 (745)
|.|+|.+.|..+.....+.|.|... +|.+...+ ...+.+|+.++|.|.+.+.|. + .+.|++++..+...
T Consensus 144 G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~--- 219 (262)
T 3rjd_A 144 GTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR--- 219 (262)
T ss_dssp EEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE---
T ss_pred EEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc---
Confidence 9999999999987777788888753 55565555 566889999999999998875 4 37899999876522
Q ss_pred EeecCcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 266 ILETGDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 266 ~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
.....|.|.++..+|+|.|+|.|.|..|..
T Consensus 220 -~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 220 -NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred -CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 244579999999999999999999999864
No 64
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=7.1e-34 Score=299.97 Aligned_cols=350 Identities=15% Similarity=0.182 Sum_probs=230.0
Q ss_pred EeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Eec----C-------------CCCCeEeccC----CcEEEE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPI----N-------------PSDRISQGNY----GKSLII 91 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i----~-------------~~~~~~~~~~----~~~L~i 91 (745)
+..+....+.+|++++|.|.+.+.+ .+.|.|+|++ ..+ . ...|+.+... ..+|.|
T Consensus 3 l~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (434)
T 1igy_B 3 LQESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHL 82 (434)
T ss_dssp EECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEE
T ss_pred eECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEE
Confidence 4556677899999999999998764 6789999863 221 0 1246665332 347999
Q ss_pred ccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCEe
Q psy11701 92 KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGKP 165 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~~ 165 (745)
.+++.+|+|.|+|.+.+..+... ..+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .+.|++++..
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~ 161 (434)
T 1igy_B 83 SSLTSDDSAVYYCVREGEVPYWG-QGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 161 (434)
T ss_dssp CSBCGGGCSEECCCCSSSSCCCC-CCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBC
T ss_pred CCCChHHCEEEEEEEEccccccC-CceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcC
Confidence 99999999999999987532221 335667753 4555444333446899999999999885 776 9999999875
Q ss_pred ccCCCCC----CceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee-----------cCCee-eeCCCceE
Q psy11701 166 ISQAPPN----PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-----------HAPEI-TEAPKDEY 229 (745)
Q Consensus 166 ~~~~~~~----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~-----------~~p~~-~~~~~~~~ 229 (745)
+...... .......+.|.|.++..+| |.|+|.|.|..+.......+.+.. ..|.+ ...|....
T Consensus 162 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~ 240 (434)
T 1igy_B 162 SGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKD 240 (434)
T ss_dssp SSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHH
T ss_pred CCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHH
Confidence 3211000 0111123569999999989 999999999988744433332210 00333 33333222
Q ss_pred -EecCceEEEEEEEeecC----CCeEEEeeCCEEccCceE---EE------eecCcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 230 -TVDGKTVVLTCRVFGAP----KPEVNWIHNQKELTGGRY---TI------LETGDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 230 -v~~g~~~~l~C~~~~~p----~~~i~W~~~~~~~~~~~~---~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
+.+|+.++|.|.+.+.+ .+.|.|++++..+..... .. ...+.|.|.++..+|.|.|+|.|.|..+.
T Consensus 241 ~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 320 (434)
T 1igy_B 241 TLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFP 320 (434)
T ss_dssp HHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCS
T ss_pred hcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCC
Confidence 78899999999999874 347999999876642210 00 11346999999999999999999998875
Q ss_pred EE--EEEEE--EEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCC------eE
Q psy11701 296 AQ--GSGSL--TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND------YS 365 (745)
Q Consensus 296 ~~--~~~~l--~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~------~~ 365 (745)
.. ..+.+ .+..+|.+...+.......|+.+.|.|.+.+.+++.+.+.|++++..+............+ ..
T Consensus 321 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~ 400 (434)
T 1igy_B 321 APIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSK 400 (434)
T ss_dssp SCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEE
T ss_pred CceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEE
Confidence 42 22222 2334454433322222235778999999999755457999999998774211111111122 24
Q ss_pred EEEecCCCCCCEEEEEEEEeCCc
Q psy11701 366 LTVTKSSELDSGQYTCRAQTELD 388 (745)
Q Consensus 366 l~i~~~~~~~~g~y~c~a~n~~g 388 (745)
|.|......|.|.|+|.|.|...
T Consensus 401 l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 401 LNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp EEEEHHHHHTTCCEEEEEEETTS
T ss_pred EEECchhccCCCEEEEEEEcCCC
Confidence 56666666679999999999864
No 65
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=4.8e-30 Score=267.04 Aligned_cols=347 Identities=23% Similarity=0.381 Sum_probs=251.8
Q ss_pred cCeEEecCce-eEeeCCCeEEEEEEEeecCCCeEEEEe-CCEeccCCCCCCceeecCceEEEccCCCCC------CEEEE
Q psy11701 125 APYFTVEPEF-INAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSD------TGNYG 196 (745)
Q Consensus 125 ~p~~~~~~~~-~~v~~G~~~~l~C~~~~~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d------~G~Y~ 196 (745)
+|.|...|.. ..+.+|+.+.|.|.+.|.|.+.++|+| +|..+.... .......++.|.|.+++.+| +|.|+
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~-~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~ 81 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVP-GLRQISSDGKLVFPPFRAEDYRQEVHAQVYA 81 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBT-TTBEECSTTEEEECCCCGGGCCHHHHEEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCC-CceEEcCCceEEecccChhhccccccCceEE
Confidence 6788888765 557899999999999999999999999 788776432 22334467899999999987 99999
Q ss_pred EEEEeCCceEE-EEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCC---CeEEEeeCCEEcc------CceEEE
Q psy11701 197 CNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK---PEVNWIHNQKELT------GGRYTI 266 (745)
Q Consensus 197 C~~~~~~g~~~-~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~------~~~~~~ 266 (745)
|.|.|..|... ..+.|.+.. +|.+...+....+.+|+.++|.|.+.+.+. +.+.|++++..+. ..++..
T Consensus 82 C~a~n~~g~~~s~~~~v~v~~-~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 2v5m_A 82 CLARNQFGSIISRDVHVRAVV-AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLV 160 (388)
T ss_dssp EEEEETTEEEECCCEEEEEEC-CCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEE
T ss_pred EEEEccCCeEEecceEEEEcc-ccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEE
Confidence 99999988743 346666654 666666777788999999999999987653 6899999987652 346666
Q ss_pred eecCcEEEcccCCCCC-EEEEEEEEeCCceEE-EE---EEEEEeec-----ceee-cCCCcEEEecCCeEEEEEEEEecC
Q psy11701 267 LETGDLKITDVAFADS-GEYTCFARNKLGTAQ-GS---GSLTVKEH-----THIT-DQPEDYEVEAGQSATFRCNAVSDP 335 (745)
Q Consensus 267 ~~~~~l~i~~~~~~d~-G~Y~C~~~n~~g~~~-~~---~~l~v~~~-----p~~~-~~p~~~~~~~g~~~~l~C~~~~~~ 335 (745)
..++.|.|.+++.+|. |.|+|.+.|..+... .. ..+.|..+ |.++ .......+..|+.+.|.|.+.+.|
T Consensus 161 ~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p 240 (388)
T 2v5m_A 161 LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFP 240 (388)
T ss_dssp CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEES
T ss_pred ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCC
Confidence 7778999999999999 999999999864432 21 24555543 2211 122345678899999999999887
Q ss_pred CCCcEEEEeeCCeeccC----CCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCCCCceeE
Q psy11701 336 SLKLSIVWLRGSEPIDF----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI 411 (745)
Q Consensus 336 ~~~~~i~W~~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~~~~~ 411 (745)
. +.+.|++++..+.. ....++. ...+.|.|..+...|.|.|+|.|.|..|.....+.|.|..||.........
T Consensus 241 ~--p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 317 (388)
T 2v5m_A 241 A--PSFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQ 317 (388)
T ss_dssp C--CEEEEEEECTTSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEE
T ss_pred C--CEEEEEecCCCCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcE
Confidence 6 67999997432210 0122222 234689999999999999999999999998888889888765321111112
Q ss_pred EeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCC
Q psy11701 412 QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491 (745)
Q Consensus 412 ~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~ 491 (745)
.+..+..+.|.|.....+. -.+ .|.+++. .+ ......+.|.++.......|+|.|.|..|....
T Consensus 318 ~v~~g~~~~l~C~~~g~p~-------p~i-~W~~~g~-------~i-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 381 (388)
T 2v5m_A 318 TVDFGRPAVFTCQYTGNPI-------KTV-SWMKDGK-------AI-GHSESVLRIESVKKEDKGMYQCFVRNDRESAEA 381 (388)
T ss_dssp EECTTSCEEEEEEEEEECC-------CEE-EEEETTE-------EC-SCCSSEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred EecCCCCEEEEEEeccccC-------CeE-EEEECCE-------EC-ccCCCEEEEecCChhhCEEEEEEEEcCCCcEEE
Confidence 2256778899998631111 123 3444331 11 234567889999999999999999999987544
Q ss_pred C
Q psy11701 492 S 492 (745)
Q Consensus 492 S 492 (745)
+
T Consensus 382 ~ 382 (388)
T 2v5m_A 382 S 382 (388)
T ss_dssp E
T ss_pred E
Confidence 3
No 66
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.97 E-value=7.4e-30 Score=253.37 Aligned_cols=274 Identities=18% Similarity=0.289 Sum_probs=206.2
Q ss_pred EeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCccee
Q psy11701 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477 (745)
Q Consensus 398 v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~ 477 (745)
...+|.+|.++.+.. .+.+++.|+|+++ ++.+.+|.|+|+..... ..+....+ ......+.|.+|.+++.|.
T Consensus 17 ~~~~p~~P~~l~~~~-~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~-~~~~~~~~-~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 17 QGPAIPAPTDLKFTQ-VTPTSLSAQWTPP-----NVQLTGYRVRVTPKEKT-GPMKEINL-APDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp ---CCCCCEEEEEEE-ECSSCEEEEEECC-----SSCCCEEEEEEEESSSS-SCCEEEEE-CTTCCEEEECSCCSSCEEE
T ss_pred eCCCCCCCCceEEEE-CCCCEEEEEEeCC-----CCCeeEEEEEEEeCCCC-CceEEEEc-CCCccEEEeCCCCCCCEEE
Confidence 345678899999988 8999999999985 35788999988876532 34555556 6678899999999999999
Q ss_pred EEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccc
Q psy11701 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557 (745)
Q Consensus 478 ~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~ 557 (745)
|+|.|.|..|.|.++. ..++|.+. |.+|.++.+...+.+++.|+|++| ++.+.+|.|+|+..+........
T Consensus 89 ~~V~a~~~~g~s~~s~-~~~~t~~~-~~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~---- 159 (290)
T 3r8q_A 89 VSVYALKDTLTSRPAQ-GVVTTLEN-VSPPRRARVTDATETTITISWRTK---TETITGFQVDAVPANGQTPIQRT---- 159 (290)
T ss_dssp EEEEEEETTEECCCEE-EEEECCCC-CCCCEEEEEEEECSSCEEEEEECC---SCCCCEEEEEEEESSSCCCEEEE----
T ss_pred EEEEEEeCCCCCCCcc-eeEecCCC-CCCCceeEEEEcCCCeEEEEEeCC---CCcccEEEEEEEECCCCcceEEe----
Confidence 9999999999998874 55666544 468899999999999999999987 35899999999987644321111
Q ss_pred cccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccCCCcceE
Q psy11701 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637 (745)
Q Consensus 558 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y 637 (745)
. .....++.|.+|.|++.|.|+|.|.|..|.|.++..........+.++.+.....+++.|+|.++. |.+.+|
T Consensus 160 -~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y 232 (290)
T 3r8q_A 160 -I-KPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPR-----ARITGY 232 (290)
T ss_dssp -E-CTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEEETTEEEEEEECCS-----SCCCEE
T ss_pred -c-CCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEEEeeCCCEEEEEEeCCC-----CcccEE
Confidence 1 456789999999999999999999999999888544333322233333333456788999998765 467899
Q ss_pred EEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCccee
Q psy11701 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 717 (745)
Q Consensus 638 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~ 717 (745)
.|.|+..++.. +.. .....+..+++.|.+|.|++.|.|
T Consensus 233 ~v~~~~~~~~~-~~~-----------------------------------------~~~~~~~~~~~~i~~L~p~t~Y~~ 270 (290)
T 3r8q_A 233 IIKYEKPGSPP-REV-----------------------------------------VPRPRPGVTEATITGLEPGTEYTI 270 (290)
T ss_dssp EEEEECTTSCC-EEC-----------------------------------------SSCCCTTCCEEEECSCCTTCEEEE
T ss_pred EEEEEeCCCCc-cee-----------------------------------------EeccCCCccEEEECCCCCCCEEEE
Confidence 99998653211 000 001135678899999999999999
Q ss_pred EEEEecCcccCCCCcceEEeC
Q psy11701 718 RVLAFNGAYNGPPSEIISFVT 738 (745)
Q Consensus 718 ~v~A~~~~G~g~~s~~~~~~t 738 (745)
+|+|.|.+|.|++.. ..++|
T Consensus 271 ~V~A~~~~g~s~p~~-~~~~T 290 (290)
T 3r8q_A 271 YVIALKNNQKSEPLI-GRKKT 290 (290)
T ss_dssp EEEEEETTEECCCEE-EEEEC
T ss_pred EEEEEeCCCcCCccc-cccCC
Confidence 999999999997743 44443
No 67
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.97 E-value=8e-30 Score=252.36 Aligned_cols=269 Identities=16% Similarity=0.243 Sum_probs=203.0
Q ss_pred EEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCc
Q psy11701 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474 (745)
Q Consensus 395 ~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~ 474 (745)
.+....+|.+|.++.+.. .+.+++.|.|+++. +.+.+|.|+|+..... ..+....+ ......+.|.+|.+++
T Consensus 8 ~~~~~~~p~~P~~l~~~~-~~~~sv~l~W~~~~-----~~~~~Y~v~~~~~~~~-~~~~~~~~-~~~~~~~~i~~L~p~t 79 (283)
T 1tdq_A 8 GGGGIPVIDGPTQILVRD-VSDTVAFVEWTPPR-----AKVDFILLKYGLVGGE-GGKTTFRL-QPPLSQYSVQALRPGS 79 (283)
T ss_dssp ----CCSSCCCEEEEEEE-ECSSCEEEEEECCS-----SCCSEEEEEEEESSSS-CCCEEEEE-CTTCSEEEECSCCTTC
T ss_pred ccccccCCCCCcEEEEEe-cCCCeEEEEEECCC-----CceeEEEEEEEEecCC-CCcEEEEe-CCCCCEEEecCCCCCC
Confidence 345567899999999988 88999999999854 5688999988765432 22344555 6678899999999999
Q ss_pred ceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccc
Q psy11701 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554 (745)
Q Consensus 475 ~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~ 554 (745)
.|.|+|.|.|..|.+.+. ...+.+ +|.+|.++++...+.+++.|+|++|. +.+.+|.|+|+..++..+....
T Consensus 80 ~Y~~~V~a~~~~g~s~~~-~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~- 151 (283)
T 1tdq_A 80 RYEVSISAVRGTNESDAS-STQFTT---EIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVL- 151 (283)
T ss_dssp EEEEEEEEEETTEECCCE-EEEEEC---CCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEE-
T ss_pred EEEEEEEEECCCCCCCCe-eEEEEC---CCCCCCceEEEecCCCeEEEEecCCC---CCccEEEEEEEeCCCCcceEEE-
Confidence 999999999998887643 344554 57778999999999999999999986 5799999999987654331111
Q ss_pred ccccccCCC---cceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccC
Q psy11701 555 RLPYISDPT---TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631 (745)
Q Consensus 555 ~~~~~~~~~---~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~ 631 (745)
+ ... ..++.+.+|.|++.|.|+|.|.|..|.|.++..........+.++.+.....+++.|+|+++ +
T Consensus 152 ----~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P~~l~~~~~~~~sv~l~W~~p-----~ 221 (283)
T 1tdq_A 152 ----V-PKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASSETSISLIWTKA-----S 221 (283)
T ss_dssp ----E-ECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEECSSCEEEEEECC-----C
T ss_pred ----C-CCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCCCccEEeEecCCEEEEEEeCC-----C
Confidence 1 233 68899999999999999999999999888754433332233333334444678899999864 3
Q ss_pred CCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEeccccc
Q psy11701 632 APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 711 (745)
Q Consensus 632 g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 711 (745)
|.+.+|.|.|+..++. .......+..+++.|.+|.|
T Consensus 222 ~~i~~Y~v~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~i~~L~p 257 (283)
T 1tdq_A 222 GPIDHYRITFTPSSGI--------------------------------------------SSEVTVPRDRTSYTLTDLEP 257 (283)
T ss_dssp SCCSEEEEEEECSSSC--------------------------------------------CEEEEEESSCSEEEECCCCT
T ss_pred CcccEEEEEEEcCCCC--------------------------------------------eeEEEeCCCccEEEECCCCC
Confidence 6789999999864221 00111246778899999999
Q ss_pred CCcceeEEEEecCcccCCCCcc
Q psy11701 712 ASKNFARVLAFNGAYNGPPSEI 733 (745)
Q Consensus 712 ~~~Y~~~v~A~~~~G~g~~s~~ 733 (745)
++.|.|+|+|.|.+|.|+++..
T Consensus 258 ~t~Y~~~V~A~~~~g~s~~~~~ 279 (283)
T 1tdq_A 258 GAEYIISITAERGRQQSLESTV 279 (283)
T ss_dssp TCCEEEEEEEEETTEECCCEEE
T ss_pred CCEEEEEEEEEcCCCCCcceee
Confidence 9999999999999999998764
No 68
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=273.34 Aligned_cols=270 Identities=18% Similarity=0.253 Sum_probs=211.7
Q ss_pred CeeEeeccceeEecCCcEEEEEEEe-------ecCCCeeEEEECCEec--CCCCCeEeccCCcEEEEccCCCCCCEEEEE
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFG-------GTPLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~-------g~p~~~v~W~~~~~~i--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 104 (745)
+.+...+.+..+.+|++++|.|.+. +.|.+.+.|+|++..+ ....+..+...+++|.|.+++.+|+|.|+|
T Consensus 19 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 98 (339)
T 3o4o_C 19 RFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVC 98 (339)
T ss_dssp EEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEEC
T ss_pred HhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEE
Confidence 4567888999999999999999997 8899999999999874 332122222345689999999999999999
Q ss_pred EEEeCCeeeEEEEEEEEEEecCeEE--ecCceeEeeCCCeEEEEEE-----EeecCCCeEEEEeCCEeccCCCCCCceee
Q psy11701 105 EVSNGVGEAKSYSIDLSVLAAPYFT--VEPEFINAAEEETVTFECK-----ASGLPEPEIHWVHNGKPISQAPPNPRRKV 177 (745)
Q Consensus 105 ~~~~~~g~~~~~~~~l~V~~~p~~~--~~~~~~~v~~G~~~~l~C~-----~~~~p~~~v~W~~~g~~~~~~~~~~~~~~ 177 (745)
.+.+..|... ..+.|.|..+|... .......+.+|+.+.|.|. +.+.|.+.+.|+|+|..+...........
T Consensus 99 ~~~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~ 177 (339)
T 3o4o_C 99 TTRNASYCDK-MSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVR 177 (339)
T ss_dssp CEEETTEEEE-EEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECT
T ss_pred EEECCcceEE-EEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcC
Confidence 9999887555 77888888766432 2233457889999999999 78888999999999998874432212222
Q ss_pred cCceEEEccCCCCCCEEEEEEEEeCCc----eEEEEEEEEEeec----CCeeeeCCCceEEecCceEEEEEEE---eecC
Q psy11701 178 GPNRITIENLRKSDTGNYGCNATNSLG----YVYKDVYVNVLAH----APEITEAPKDEYTVDGKTVVLTCRV---FGAP 246 (745)
Q Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~~~~~~g----~~~~~~~l~v~~~----~p~~~~~~~~~~v~~g~~~~l~C~~---~~~p 246 (745)
..+.|.|.+++.+|+|.|+|.+.|..| .....+.|.|... +|.+...+....+.+|+.++|.|.+ .+.|
T Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P 257 (339)
T 3o4o_C 178 GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTP 257 (339)
T ss_dssp TSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCC
T ss_pred CcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCC
Confidence 335899999999999999999999877 4566677887642 5677777777788999999999999 8888
Q ss_pred -CCeEEEeeCCEEcc----------CceEEEeecC------cEEEcccCCCCC-EEEEEEEEeCCceEEEEEEEEE
Q psy11701 247 -KPEVNWIHNQKELT----------GGRYTILETG------DLKITDVAFADS-GEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 247 -~~~i~W~~~~~~~~----------~~~~~~~~~~------~l~i~~~~~~d~-G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
.+.+.|++++..+. ..++....++ .|.|.++..+|. |.|+|.|.|..|..+..+.+.+
T Consensus 258 ~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 258 LTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp SSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred CCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 77999999887643 2233333344 799999999997 9999999999999876665544
No 69
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=1.5e-30 Score=266.40 Aligned_cols=265 Identities=23% Similarity=0.297 Sum_probs=176.3
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCC-----------CeeEEEECCE------ecC---CCCCeEeccCCcEEEEccCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPL-----------PQTIWSKDGV------PIN---PSDRISQGNYGKSLIIKHVE 95 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~-----------~~v~W~~~~~------~i~---~~~~~~~~~~~~~L~i~~~~ 95 (745)
......++.+.+|++++|.|.+.+.|. +.+.|+|++. .+. ...++. ..+..|.|.+++
T Consensus 10 ~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~ 87 (349)
T 4dep_C 10 GLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS--KEKDVLWFRPTL 87 (349)
T ss_dssp EECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE--EETTEEEESSCC
T ss_pred ccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEe--ecCCEEEEccCC
Confidence 334467788999999999999987654 8999999884 222 123333 335589999999
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEE----ecCceeEeeCCCeEEEEEEE-----eecCCCeEEEEeCCEec
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT----VEPEFINAAEEETVTFECKA-----SGLPEPEIHWVHNGKPI 166 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~----~~~~~~~v~~G~~~~l~C~~-----~~~p~~~v~W~~~g~~~ 166 (745)
.+|+|.|+|.|.+..+... ..+.|.|..+|.+. ..+....+.+|+.+.|.|.+ .+.|.+.++|+|+|..+
T Consensus 88 ~~D~G~Y~C~a~n~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l 166 (349)
T 4dep_C 88 LNDTGNYTCMLRNTTYCSK-VAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKI 166 (349)
T ss_dssp GGGCEEEEEEEECSSCEEE-EEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEEC
T ss_pred hhhCEEEEEEEecCCceEE-EEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEEC
Confidence 9999999999999877665 56888888766432 22446678899999999985 67889999999999988
Q ss_pred cCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC-ceE---EEEEEEEEeec-----CCeeeeCCCce--EEecCce
Q psy11701 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL-GYV---YKDVYVNVLAH-----APEITEAPKDE--YTVDGKT 235 (745)
Q Consensus 167 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-g~~---~~~~~l~v~~~-----~p~~~~~~~~~--~v~~g~~ 235 (745)
... .........|.|.+++.+|+|.|+|.|.|.. |.. ...+.|.|... +|.+...+... .+.+|+.
T Consensus 167 ~~~---~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~ 243 (349)
T 4dep_C 167 QNF---NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEE 243 (349)
T ss_dssp CSC---SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC---------------
T ss_pred CCc---cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCc
Confidence 632 3444556789999999999999999999986 543 45566777643 56665555433 7789999
Q ss_pred EEEEEEEe----ecCCCeEEEeeCCEEccC--ceEEE------------eecCcEEEcccCCCCC-EEEEEEEEeCCceE
Q psy11701 236 VVLTCRVF----GAPKPEVNWIHNQKELTG--GRYTI------------LETGDLKITDVAFADS-GEYTCFARNKLGTA 296 (745)
Q Consensus 236 ~~l~C~~~----~~p~~~i~W~~~~~~~~~--~~~~~------------~~~~~l~i~~~~~~d~-G~Y~C~~~n~~g~~ 296 (745)
++|.|.+. +.|.+.+.|++++..+.. .++.. .....|.|.++..+|. |.|+|.|.|..|..
T Consensus 244 v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~ 323 (349)
T 4dep_C 244 LLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEV 323 (349)
T ss_dssp -CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEE
T ss_pred EEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcE
Confidence 99999998 467889999999887654 22111 1123599999999999 99999999999999
Q ss_pred EEEEEEEEee
Q psy11701 297 QGSGSLTVKE 306 (745)
Q Consensus 297 ~~~~~l~v~~ 306 (745)
...+.|.|..
T Consensus 324 ~~~~~l~v~~ 333 (349)
T 4dep_C 324 AKAAKVKQKV 333 (349)
T ss_dssp EEECC-----
T ss_pred EEEEEEeeec
Confidence 8888888865
No 70
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=246.84 Aligned_cols=280 Identities=21% Similarity=0.283 Sum_probs=225.9
Q ss_pred cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC--ceEEEe--ecC--cEEEcccCCCCCEEEEEEEE
Q psy11701 217 HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG--GRYTIL--ETG--DLKITDVAFADSGEYTCFAR 290 (745)
Q Consensus 217 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~--~~~--~l~i~~~~~~d~G~Y~C~~~ 290 (745)
.+|.|...|....+.+|++++|.|.+.+.|.+.+.|++++..+.. .++... .++ .|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 478888889999999999999999999999999999999988753 344432 223 79999999999999999999
Q ss_pred eCCceEEEEEEEEEeecceeecC-----CCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEc-CCe
Q psy11701 291 NKLGTAQGSGSLTVKEHTHITDQ-----PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS-NDY 364 (745)
Q Consensus 291 n~~g~~~~~~~l~v~~~p~~~~~-----p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~-~~~ 364 (745)
|..|.....+.|.|..+|.+... +....+..|+.+.|.|.+.+.|. +.+.|++++..+........... ...
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~~~~~~~ 160 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPD--PVITWQKGQDLIDNNGHYQVIVTRSFT 160 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESC--CEEEEEESSSBCCSSSSCEEEECSSEE
T ss_pred cCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCC--CEEEEEECCEECCCCCcEEEEEcCCce
Confidence 99999888899999877765332 35577889999999999999886 68999999888764333333322 346
Q ss_pred EEEEec-CCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEE
Q psy11701 365 SLTVTK-SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443 (745)
Q Consensus 365 ~l~i~~-~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~ 443 (745)
.|.|.. +...|.|.|+|.|.|..|.....+.|.+..+|.+|.++.+.. ....++.|.|.++ ..+.+..+..|.++++
T Consensus 161 ~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~-~~~~~v~l~w~~p-~~~g~~~i~~y~v~~~ 238 (305)
T 2nzi_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSD-VSRDSVNLTWTEP-ASDGGSKITNYIVEKC 238 (305)
T ss_dssp EEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEES-CCSSCEEEEEECC-SCCSBSCEEEEEEEEE
T ss_pred EEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeee-ccCCEEEEEEcCC-ccCCCCceeEEEEEEe
Confidence 899998 999999999999999999999999999999999999988876 7889999999984 3345567999999887
Q ss_pred eccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceE-EeCCCCCC
Q psy11701 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVP 504 (745)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~-~~t~~~~P 504 (745)
.... ..|..... .....++|.+|.+++.|.|+|.|.|..|.|.+|.... +++.+++|
T Consensus 239 ~~~~--~~w~~~~~--~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p 296 (305)
T 2nzi_A 239 ATTA--ERWLRVGQ--ARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKT 296 (305)
T ss_dssp ETTS--CCEEEEEE--ESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECCC---
T ss_pred cCCC--CccEECcc--ccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCccc
Confidence 7644 33433332 2367899999999999999999999999999987654 44444444
No 71
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.97 E-value=1.1e-29 Score=253.62 Aligned_cols=280 Identities=20% Similarity=0.177 Sum_probs=207.7
Q ss_pred CCCcEEEecCCeEEEEEEEEec-----CCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCC
Q psy11701 313 QPEDYEVEAGQSATFRCNAVSD-----PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387 (745)
Q Consensus 313 ~p~~~~~~~g~~~~l~C~~~~~-----~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 387 (745)
.|.+..+..|++++|.|.+.+. ..+.+.|.|++++..+... .........+.|.|.++... .|.|+|.|.+..
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~~~~~~~L~i~~~~~~-~g~Y~C~a~~~g 87 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTIINRTASSVTFTDIASL-NIQLTCNILTFG 87 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEEETTEEEEEECSCCCS-EEEEEEEEEETT
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeeeCCcEEEEEEcCcCCC-ceEEEEecccCC
Confidence 4556778999999999999864 1224789999999887532 22333333468999999887 499999998853
Q ss_pred ceE--EEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEE
Q psy11701 388 DFI--EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465 (745)
Q Consensus 388 g~~--~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (745)
+.. ...+.+.+..||.+|.++.+.. .+.+++.|+|+++... +.+.+|.|+|+....... ..... ......+
T Consensus 88 ~~~~~~~~~~l~v~~~P~~P~~l~~~~-~~~~~v~l~W~~~~~~---~~~~~Y~v~~~~~~~~~~--~~~~~-~~~~~~~ 160 (303)
T 1i1r_A 88 QLEQNVYGITIISGLPPEKPKNLSCIV-NEGKKMRCEWDGGRET---HLETNFTLKSEWATHKFA--DCKAK-RDTPTSC 160 (303)
T ss_dssp TEEEEEEEEEEEEECCCCCCEEEEEEE-ETTSCCEEEEECCSCC---SSCCEEEEEEEETTEECC--CEECC-SSCTTEE
T ss_pred CcceEEEEEEEeccCCCCCCeeeEEEE-CCCCcEEEEccCCCCC---CCCcCEEEEEEecCCCCc--cCCCc-CCCceEE
Confidence 222 3446778889999999999877 7778999999986432 346799999876532211 11112 4456789
Q ss_pred Eeccc-ccCcceeEEEEEecCCCCCCCCcceEEeC-CCCCCCCCCceeEEEc--CCceEEEEeeCCCCCCCceeeEEEEE
Q psy11701 466 EVDKF-VPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPGTVQSLEAIPL--GSSAFYLKWVKPEQPNGVLMGYKIKY 541 (745)
Q Consensus 466 ~i~~L-~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t-~~~~P~~p~~~~~~~~--~~~~i~l~W~~p~~~~g~i~~Y~v~~ 541 (745)
+|.+| .+++.|.|+|.|.|..|.+.++. ..+.+ ...+|++|.++.+... +.+++.|+|++|...+|.|.+|.|+|
T Consensus 161 ~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~-~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y 239 (303)
T 1i1r_A 161 TVDYSTVYFVNIEVWVEAENALGKVTSDH-INFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQY 239 (303)
T ss_dssp ECSSCCCTTSCEEEEEEEEETTEEEECCC-EEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEE
T ss_pred EECCcCcccccEEEEEEEEcCCCCcccCC-EEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEE
Confidence 99999 99999999999999999986433 33433 2357888988888755 67899999999987788999999999
Q ss_pred EEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCC
Q psy11701 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605 (745)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~ 605 (745)
+..+...|..... .........+.|.+|.|++.|+|+|+|.|.+|.|++|+++......++
T Consensus 240 ~~~~~~~w~~~~~---~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~ 300 (303)
T 1i1r_A 240 RTKDASTWSQIPP---EDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 300 (303)
T ss_dssp EETTCSSCEECCG---GGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECC
T ss_pred EeCCCCCceEEcc---ccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCC
Confidence 9876544332210 000335578999999999999999999999999999987765555544
No 72
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=8.6e-31 Score=264.08 Aligned_cols=260 Identities=21% Similarity=0.286 Sum_probs=202.3
Q ss_pred cceeEecCCcEEEEEEEeecC-CCeeEEEECCEecC----CCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEE
Q psy11701 41 KKEVALRNKKVELFCIFGGTP-LPQTIWSKDGVPIN----PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKS 115 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g~p-~~~v~W~~~~~~i~----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~ 115 (745)
....+.+|++++|.|.+.+.| .+.+.|+|++..+. ...++... +++|.|.+++.+|+|.|+|.+.+..|...
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~- 89 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH--KEKLWFVPAKVEDSGHYYCVVRNSSYCLR- 89 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--SSBEECTTCCGGGCSCCEECCCSSSCCCC-
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc--CCeEEECCCChhhCEEEEEEEeCCceEEE-
Confidence 356799999999999998887 77999999986542 23444433 45899999999999999999998877655
Q ss_pred EEEEEEEE-ecCeEEecC---ceeEeeCCCeEEEEEEE------eecCCCeEEEEeCCEeccCCCCCCceeecCceEEEc
Q psy11701 116 YSIDLSVL-AAPYFTVEP---EFINAAEEETVTFECKA------SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185 (745)
Q Consensus 116 ~~~~l~V~-~~p~~~~~~---~~~~v~~G~~~~l~C~~------~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~ 185 (745)
..+.+.+. .+|.+...+ ....+.+|+++.|.|.+ .+.|.+.+.|+|+|..+... ..+....++.|.|.
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~--~~~~~~~~~~L~i~ 167 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD--NIHFSGVKDRLIVM 167 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC--SSSEEEETTEEEES
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc--cceEeecCceEEEE
Confidence 44455543 345443332 23568899999999998 78899999999999998643 23455567899999
Q ss_pred cCCCCCCEEEEEEEE-eCCceEE---EEEEEEEe----ecCCeeeeCCCc-eEEecCceEEEEEEEeecCCCeEEEeeCC
Q psy11701 186 NLRKSDTGNYGCNAT-NSLGYVY---KDVYVNVL----AHAPEITEAPKD-EYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~-~~~g~~~---~~~~l~v~----~~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~p~~~i~W~~~~ 256 (745)
+++.+|+|.|+|.|. |..|... ..+.+.+. ..+|.+...+.. ..+.+|+.++|.|.+.+.|.+.+.|++++
T Consensus 168 ~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g 247 (315)
T 1itb_B 168 NVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 247 (315)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETT
T ss_pred eceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECC
Confidence 999999999999999 7777763 33444444 256777666554 46889999999999999999999999999
Q ss_pred EEccCc------eEEEe----------ecCcEEEcccCCCC-CEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 257 KELTGG------RYTIL----------ETGDLKITDVAFAD-SGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 257 ~~~~~~------~~~~~----------~~~~l~i~~~~~~d-~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
..+... .+... ..+.|.|.++..+| +|.|+|.|.|..|.....+.|.|+
T Consensus 248 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 248 SVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred EECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 987642 12111 12379999999999 999999999999999988888775
No 73
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.97 E-value=8.6e-28 Score=248.42 Aligned_cols=357 Identities=15% Similarity=0.188 Sum_probs=256.7
Q ss_pred CCCcEEEe--cCC-eEEEEEEEEec-CCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCc
Q psy11701 313 QPEDYEVE--AGQ-SATFRCNAVSD-PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388 (745)
Q Consensus 313 ~p~~~~~~--~g~-~~~l~C~~~~~-~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 388 (745)
.|.++.+. ... .+.|.|..... ....+.+.|...+..-.. ............+.+.++.....+.|++.|.|..|
T Consensus 5 ~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g 83 (375)
T 3t1w_A 5 PPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN-SLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDK 83 (375)
T ss_dssp CCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSC-CEEEEEETTCCEEEECCCCTTCCEEEEEEEEETTE
T ss_pred CCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCc-ceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcCCC
Confidence 44445442 244 68888876532 233467777764431110 11122233556889999999999999999999887
Q ss_pred eEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEec
Q psy11701 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468 (745)
Q Consensus 389 ~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 468 (745)
.+..........+| +|.++.+.. .+.+++.|+|+++. ++.+.+|.|+|+..+.. .......+ ......+++.
T Consensus 84 ~s~~~~~~~~~~~p-~p~~l~~~~-~~~~si~l~W~~~~----~~~i~~Y~v~~~~~~~~-~~~~~~~~-~~~~~~~~i~ 155 (375)
T 3t1w_A 84 ESVPISDTIIPEVP-QLTDLSFVD-ITDSSIGLRWTPLN----SSTIIGYRITVVAAGEG-IPIFEDFV-DSSVGYYTVT 155 (375)
T ss_dssp ECCCEEEEECCCCC-CCSCCEEEC-CCSSEEEEECCCCC----CTTEEEEEEEEEESSSC-CSCEEEEE-CTTCCEEEEE
T ss_pred CCCcEEeeEcCCCC-CCceEEEEe-cCCCeEEEEEECCC----CCCceEEEEEEEECCCC-CceeEEEc-CCCcceEEEe
Confidence 55443333333333 578998877 78999999999853 35789999988865543 22333444 6678899999
Q ss_pred ccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcc
Q psy11701 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK 548 (745)
Q Consensus 469 ~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~ 548 (745)
+|.+++.|.|+|.|.|..|.|.++. ....| .|.+|.++.+...+.+++.|+|++|. ++.+.+|.|+|+..+...
T Consensus 156 ~L~p~t~Y~~~V~a~~~~g~s~~s~-~~~~t---~~~~p~~l~~~~~~~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~ 229 (375)
T 3t1w_A 156 GLEPGIDYDISVITLINGGESAPTT-LTQQT---AVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEE 229 (375)
T ss_dssp CCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCCCCEEEEEESCCSSCEEEEEECCS--SCCCCEEEEEEEEGGGTT
T ss_pred CCCCCCEEEEEEEEEeCCcccCCee-eeeec---CCCCCceeEEEecccCEEEEEEcCCC--CCCccEEEEEEEeCCCCC
Confidence 9999999999999999999998877 44444 34478899999899999999999974 467999999999876432
Q ss_pred cCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCcc
Q psy11701 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEI 628 (745)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~ 628 (745)
...... + .....++.+.+|.|++.|.|+|.|.|..|.|.++..........+..+.+.....+++.|+|+++.
T Consensus 230 ~~~~~~----~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~-- 302 (375)
T 3t1w_A 230 DVAELS----I-SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPR-- 302 (375)
T ss_dssp CCEEEE----E-CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSCEEEEEECCS--
T ss_pred CcEEEE----c-CCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCCCCccEeeeccCCEEEEEECCCC--
Confidence 211111 2 456689999999999999999999999999988755444333344444454567899999998763
Q ss_pred ccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEE
Q psy11701 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELI 695 (745)
Q Consensus 629 ~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~ 695 (745)
|.+.+|.|.|+..++..... ..........+++.||.+++.|.|+|.|....|.++.......
T Consensus 303 ---~~~~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~ 365 (375)
T 3t1w_A 303 ---ATITGYRIRHHPEHFSGRPR-EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQS 365 (375)
T ss_dssp ---SCCSEEEEEEEETTCCSSCE-EEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEE
T ss_pred ---cceeeEEEEEEECCCCCcce-eEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeE
Confidence 57899999999765423222 2333455688999999999999999999998888876554443
No 74
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=3.4e-30 Score=258.74 Aligned_cols=267 Identities=20% Similarity=0.302 Sum_probs=196.9
Q ss_pred ccceeEecCCcEEEEEEEeec-CCCeeEEEECCEecC---------------C--CCCeEecc---CCcEEEEccCCCCC
Q psy11701 40 RKKEVALRNKKVELFCIFGGT-PLPQTIWSKDGVPIN---------------P--SDRISQGN---YGKSLIIKHVEFSD 98 (745)
Q Consensus 40 ~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~i~---------------~--~~~~~~~~---~~~~L~i~~~~~~d 98 (745)
++++.+.+|++++|.|.+.+. +.+.|+|+|++.... . ..|+.+.. .+.+|.|.+++.+|
T Consensus 6 ~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 6 EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 346789999999999998654 445799998643211 0 13343322 23579999999999
Q ss_pred CEEEEEEEEeCCeeeEEEEEEEEEEecCeEE--ecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCC--C
Q psy11701 99 QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT--VEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPN--P 173 (745)
Q Consensus 99 ~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~--~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~--~ 173 (745)
+|.|+|.|.+..+...+..+.+.+...|.+. ..+.......|+.+.|.|.+ .|.|.+.++|++++..+...... .
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 9999999998754444466778887766543 34555566788999999986 67899999999999877532111 1
Q ss_pred ceeecCceEEEccCCCCCCEEEEEEEEeCCceE--EEEEEEEEeecCCeeeeCC-CceEEecCceEEEEEEEeecCCC-e
Q psy11701 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNVLAHAPEITEAP-KDEYTVDGKTVVLTCRVFGAPKP-E 249 (745)
Q Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~--~~~~~l~v~~~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~~-~ 249 (745)
......+.|.|.++..+|+|.|+|.|.|..+.. ...+.|.|.. +|.+...+ ....+..|+.++|.|.+.+.|.+ .
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~-~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~ 244 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQY-APEVSVTGYDGNWFVGRKGVNLKCNADANPPPFK 244 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCE-EEEECCBCCCSCEETTCCSCEEECCEEEESCEEE
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEec-CCeeEEcccceeeeeccccEEEEEEEecCCCCcE
Confidence 111223579999999999999999999987653 4445566654 55555443 44566778999999999999988 6
Q ss_pred EEEeeCCEEccCceEEEeecC-cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecce
Q psy11701 250 VNWIHNQKELTGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309 (745)
Q Consensus 250 i~W~~~~~~~~~~~~~~~~~~-~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~ 309 (745)
+.|++++..+..... ..++ .|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.++|.
T Consensus 245 v~W~k~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 245 SVWSRLDGQWPDGLL--ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EECCBSSSCCCSSCB--CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEECCeECCCcEE--EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999887754421 2223 356788999999999999999999999999999988763
No 75
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=255.66 Aligned_cols=271 Identities=20% Similarity=0.282 Sum_probs=205.0
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGL-PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.+|.|.. |....+.+|+++.|.|.+.+. |.+.+.|+|+|..+..... .....+...|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~~P~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 6 TGPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK-HDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp SCCEEEE-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC------CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred CCCcEee-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCc-EEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 3666763 445889999999999999886 7789999999999874332 223345579999999999999999999999
Q ss_pred CceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEee----------cCCCeEEEeeCCEEccC-ceEEEeecC-
Q psy11701 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG----------APKPEVNWIHNQKELTG-GRYTILETG- 270 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~----------~p~~~i~W~~~~~~~~~-~~~~~~~~~- 270 (745)
.|.....+.|.|.. +|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+.. .++.....+
T Consensus 84 ~g~~~~~~~l~v~~-~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 84 RGKDKSRLKLVDEA-FKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp SCEEEEEECCSTHH-HHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CCcEEEEEEEEEec-CccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 98877766665543 233322233334556777777777666 67889999999988753 344443333
Q ss_pred --cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee--------------------cce-eecCCCcEEEecCCeEEE
Q psy11701 271 --DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE--------------------HTH-ITDQPEDYEVEAGQSATF 327 (745)
Q Consensus 271 --~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~--------------------~p~-~~~~p~~~~~~~g~~~~l 327 (745)
.|.|.++..+|+|.|+|.|.|..|.....+.+.+.. .|. ....|....+..|+.+.|
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 242 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 242 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCE
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEE
Confidence 499999999999999999999998888777776542 122 223455678899999999
Q ss_pred EEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCC----eEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND----YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 328 ~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~----~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
.|.+.+.|. +.+.|++++..+... .++..... ..|.|..+...|.|.|+|.|.|..|.....+.|.|..|
T Consensus 243 ~C~~~g~p~--p~i~W~~~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 243 TCNVWGDPP--PEVSWLKNEKALASD--DHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp EEEEECSSC--CEEEEEESSSEECCC--SSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEecCCC--CEEEEEECCEeCCCC--CcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 999998886 679999999888643 33333222 48999999999999999999999999999999988754
No 76
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.97 E-value=4.8e-29 Score=244.01 Aligned_cols=237 Identities=21% Similarity=0.334 Sum_probs=184.6
Q ss_pred eEecCCcEEEEEEEee-cCCC--eeEEEECCEecCCCCCeEeccCCcEEEEccC---CCCCCEE--EEEEEEeCCeeeEE
Q psy11701 44 VALRNKKVELFCIFGG-TPLP--QTIWSKDGVPINPSDRISQGNYGKSLIIKHV---EFSDQGS--YTCEVSNGVGEAKS 115 (745)
Q Consensus 44 ~v~~G~~~~l~C~~~g-~p~~--~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~---~~~d~G~--Y~C~~~~~~g~~~~ 115 (745)
.+.+|++++|.|.+.| .|.+ ++.|+|+|..+.. ++ ...+..|.+..+ +.+|+|. |+|.+.+..|...
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~~--~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~- 88 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TV--TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE- 88 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--EE--EECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEE-
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--eE--eeCCCeEEEEeecccccccCCcceEEEEEecCCCCcE-
Confidence 7899999999999998 7776 9999999999874 22 233446666665 7888884 9999999888755
Q ss_pred EEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEE
Q psy11701 116 YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNY 195 (745)
Q Consensus 116 ~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 195 (745)
..+.|.|...|.....+....+.+|+.+.|.|.+. |.+.++| +|..+... ...+.|.|..+..+|+|.|
T Consensus 89 ~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~-------~~~~~l~i~~~~~~~~g~Y 157 (265)
T 2oz4_A 89 TLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL-------GPRAQLLLKATPEDNGRSF 157 (265)
T ss_dssp EEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC-------SSEECCEEECCGGGTTEEE
T ss_pred EEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC-------CCcEEEEEccccccCCceE
Confidence 67888887644333334566788999999999998 8889999 77776311 1235688999999999999
Q ss_pred EEEEEeCC-ceEE---EEEEEEEeecCCeeeeC--CCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeec
Q psy11701 196 GCNATNSL-GYVY---KDVYVNVLAHAPEITEA--PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269 (745)
Q Consensus 196 ~C~~~~~~-g~~~---~~~~l~v~~~~p~~~~~--~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~ 269 (745)
+|.|.|.. |... ..+.|.|.. +|.+... |....+.+|+.++|.|.+.|.|.+.+.|++++.. ....
T Consensus 158 ~C~a~n~~~g~~~~~s~~~~l~V~~-~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~-------~~~~ 229 (265)
T 2oz4_A 158 SCSATLEVAGQLIHKNQTRELRVLY-GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTF-------PLPI 229 (265)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEEEE-EEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTE-------ECCT
T ss_pred EEEEEcCCCCCcccccccEEEEEEe-CCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcc-------cCCC
Confidence 99998544 6554 557777765 5554433 5567889999999999999999999999999872 2233
Q ss_pred CcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 270 ~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
+.+. .++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 230 g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 230 GESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp TSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 4443 3777999999999999999999999998864
No 77
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.97 E-value=2.8e-28 Score=269.75 Aligned_cols=321 Identities=13% Similarity=0.134 Sum_probs=219.3
Q ss_pred CCCEEEEEEEEeCCceEEEEEEEEEeccCCCC-CCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccC----C
Q psy11701 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD----G 448 (745)
Q Consensus 374 ~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P-~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~----~ 448 (745)
...|.+.| +.|..|.........+...|.+| .++.+.. .+.+++.|+|+++.. ....++. |.|+|+.... .
T Consensus 133 ~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~-~~~~sv~l~W~pp~~-~~~~~i~-Y~V~~r~~~g~~~~~ 208 (680)
T 1zlg_A 133 ECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTE-LQSGQLEVKWSSKFN-ISIEPVI-YVVQRRWNYGIHPSE 208 (680)
T ss_pred cCCCcccc-ccccccccccccceeeecccccccccceEEe-ccCceEEEEEeCCCC-CCCCCEE-EEEEEEECCCCCcCc
Confidence 45566777 45566654443333456778888 7999988 889999999998532 2345566 9999987532 1
Q ss_pred --CCceeEEEEccCceeEEEecccccCcceeEEEEEecCCC-CCCCCcceEEeCCC--CCCCCCCceeEEEc--CCc---
Q psy11701 449 --EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY-NGPPSEIISFVTPE--GVPGTVQSLEAIPL--GSS--- 518 (745)
Q Consensus 449 --~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G-~g~~S~~~~~~t~~--~~P~~p~~~~~~~~--~~~--- 518 (745)
...|..+. ......++|.+|.|++.|.|+|.|.|..| .+..+....+++.+ .+|++|.++++... +.+
T Consensus 209 ~~~~~w~~v~--~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~ 286 (680)
T 1zlg_A 209 DDATHWQTVA--QTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSV 286 (680)
T ss_pred cccCceEEEE--ecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCce
Confidence 12333333 24567899999999999999999999999 55555556677754 57889999999888 778
Q ss_pred eEEEEeeCCCCCCCceeeEEEEEEEc-CCc---ccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCc
Q psy11701 519 AFYLKWVKPEQPNGVLMGYKIKYQSV-KGT---KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594 (745)
Q Consensus 519 ~i~l~W~~p~~~~g~i~~Y~v~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S 594 (745)
+|.|+|++|.+.+|+|.+|.|+|+.. +.. ....+... .+ ....++++|.+|.|++.|.|+|.|+|..|.|++|
T Consensus 287 sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~--~v-~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S 363 (680)
T 1zlg_A 287 TVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRK--TT-DGFQNSVILEKLQPDCDYVVELQAITYWGQTRLK 363 (680)
T ss_pred EEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEE--EE-cCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCC
Confidence 99999999987889999999999832 211 11112111 12 4456899999999999999999999999999988
Q ss_pred ce---eeecccCCC---CCCCCCCCCCcceeE-----------EEeecCccccCCCcceEEEEEeccCCCCCCCccCccc
Q psy11701 595 KY---LFYVPFKNP---DNVEGRGSTPNNLVI-----------SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657 (745)
Q Consensus 595 ~~---~~~~~~~~~---~~~~~~~~~p~~~~v-----------~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~ 657 (745)
.. +.+.+...+ .++.+....++++.| +|.+|.. . +.+.+|.|+|.....+
T Consensus 364 ~~~~~v~~~T~~~~P~p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~--~-~~~~~y~v~w~~~~~~---------- 430 (680)
T 1zlg_A 364 SAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFY--Q-DGQLQVKVYWKKTEDP---------- 430 (680)
T ss_pred CCceeEEEECCCCCCCccccccccccCccccccccccCCCccccccCCcc--c-CCcceEEEEEeCCCCC----------
Confidence 76 333322221 222333345566665 9997753 2 2357999999865321
Q ss_pred cccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCC
Q psy11701 658 WRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 729 (745)
Q Consensus 658 ~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~ 729 (745)
....|.|+........ ...............+++.|.+|.|++.|.|+|+|.|.+|.|+
T Consensus 431 ------------~v~~Y~V~w~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~ 489 (680)
T 1zlg_A 431 ------------TVNRYHVRWFPEACAH-NRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSK 489 (680)
T ss_pred ------------ccceEEEEEeeeeccc-CCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCC
Confidence 1245666432110000 0000011122245678999999999999999999999999775
No 78
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=8.9e-28 Score=257.39 Aligned_cols=348 Identities=16% Similarity=0.220 Sum_probs=223.8
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCC----CeeEEEEC--CEecC----------------CCCCeEecc----CCcEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPL----PQTIWSKD--GVPIN----------------PSDRISQGN----YGKSL 89 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~----~~v~W~~~--~~~i~----------------~~~~~~~~~----~~~~L 89 (745)
.+..|..+.+.+|++++|.|.+.+.+. ..+.|+|+ |..+. -..|+.+.. ...+|
T Consensus 3 ~l~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 82 (512)
T 1zvo_C 3 QLQESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSL 82 (512)
T ss_pred EEECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEE
Confidence 345677888999999999999987543 57999985 32110 024555432 12589
Q ss_pred EEccCCCCCCEEEEEEEEeCCe-----------e-eEEEEEEEEEEe----cCeEEe-cCceeEeeCCCeEEEEEEEeec
Q psy11701 90 IIKHVEFSDQGSYTCEVSNGVG-----------E-AKSYSIDLSVLA----APYFTV-EPEFINAAEEETVTFECKASGL 152 (745)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~g-----------~-~~~~~~~l~V~~----~p~~~~-~~~~~~v~~G~~~~l~C~~~~~ 152 (745)
.|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+.. .+.......|+.+.|.|.+.|.
T Consensus 83 ~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~ 162 (512)
T 1zvo_C 83 NLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGY 162 (512)
T ss_pred EECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEee
Confidence 9999999999999999987532 1 112335677763 454432 2222212357899999999885
Q ss_pred -CCC-eEEEEeCCEeccCCCCCCcee------ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEE-----------EEE
Q psy11701 153 -PEP-EIHWVHNGKPISQAPPNPRRK------VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV-----------YVN 213 (745)
Q Consensus 153 -p~~-~v~W~~~g~~~~~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~-----------~l~ 213 (745)
|.+ .++|++++...... ...... ...+.|.|.....+ +|.|+|.|.|..+...... .+.
T Consensus 163 ~P~p~~v~W~~~~~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~ 240 (512)
T 1zvo_C 163 HPTSVTVTWYMGTQSQPQR-TFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSV 240 (512)
T ss_pred ecCceEEEEEcCcccCceE-ecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEE
Confidence 665 89999976432100 011111 11246889888877 9999999999887655443 222
Q ss_pred Eee---------------------------------------------------cCCee-eeCCCceEEecCceEEEEEE
Q psy11701 214 VLA---------------------------------------------------HAPEI-TEAPKDEYTVDGKTVVLTCR 241 (745)
Q Consensus 214 v~~---------------------------------------------------~~p~~-~~~~~~~~v~~g~~~~l~C~ 241 (745)
+.. .+|.+ ...|....+.+|+.++|.|.
T Consensus 241 l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~ 320 (512)
T 1zvo_C 241 PTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCF 320 (512)
T ss_pred EeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEE
Confidence 221 12333 23334344667999999999
Q ss_pred EeecCC--CeEEEeeCCEEccCc----eEEEeec------CcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEE-----
Q psy11701 242 VFGAPK--PEVNWIHNQKELTGG----RYTILET------GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV----- 304 (745)
Q Consensus 242 ~~~~p~--~~i~W~~~~~~~~~~----~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v----- 304 (745)
+.+..+ ..|+|++++..+... ......+ ..|.|.....+|.|.|+|.|.|..+... ...+..
T Consensus 321 v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~ 399 (512)
T 1zvo_C 321 VVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQ 399 (512)
T ss_pred EeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCC
Confidence 988633 389999999876521 1111122 3489999988999999999999876543 222221
Q ss_pred -eecceeecCCCcEEEecCCeEE-EEEEEEecCCCCcEEEEeeCCeeccCCCC--CeEEEcCC-------eEEEEecCCC
Q psy11701 305 -KEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSND-------YSLTVTKSSE 373 (745)
Q Consensus 305 -~~~p~~~~~p~~~~~~~g~~~~-l~C~~~~~~~~~~~i~W~~~~~~~~~~~~--~~~~~~~~-------~~l~i~~~~~ 373 (745)
..+|.+...+... .|+.+. |.|.+.+.+++.+.+.|.+++..+..... .......+ ..|.+.....
T Consensus 400 ~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~ 476 (512)
T 1zvo_C 400 APVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPS 476 (512)
T ss_pred CCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhc
Confidence 1234332222211 688899 99999997776788999999988764211 11122222 2355665666
Q ss_pred CCCEEEEEEEEeCCce
Q psy11701 374 LDSGQYTCRAQTELDF 389 (745)
Q Consensus 374 ~~~g~y~c~a~n~~g~ 389 (745)
.+.|.|+|.|.|....
T Consensus 477 ~~~g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 477 PQPATYTCVVSHEDSR 492 (512)
T ss_pred CCCCeEEEEEEecCCC
Confidence 6799999999998654
No 79
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=2.8e-29 Score=254.23 Aligned_cols=262 Identities=19% Similarity=0.241 Sum_probs=181.0
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeec-CCCeeEEEECCEecC---------CCCCeEec-------cCCcEEEEccCC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGT-PLPQTIWSKDGVPIN---------PSDRISQG-------NYGKSLIIKHVE 95 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~i~---------~~~~~~~~-------~~~~~L~i~~~~ 95 (745)
+..+...|....+.+|++++|.|.+.+. |.+.|.|+|++.++. ...++... ....+|.|.+++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3456677889999999999999999887 888999999886532 11244432 334579999999
Q ss_pred CCCCEEEEEEEEeCCeeeE----EEEEEEEEEecCeE-EecCceeEeeCCCeEEEEEEEeecCCC--eEEEEeCCEeccC
Q psy11701 96 FSDQGSYTCEVSNGVGEAK----SYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEP--EIHWVHNGKPISQ 168 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~----~~~~~l~V~~~p~~-~~~~~~~~v~~G~~~~l~C~~~~~p~~--~v~W~~~g~~~~~ 168 (745)
.+|+|.|+|.+.+..+... +..+.|.|..+|.. ...+....+.+|+.+.|.|.+.+.|++ .++|+++|..+..
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 9999999999998755321 23467788765542 122223568899999999999987665 8999999998864
Q ss_pred CCCC------CceeecCceEEEccCCCCCCEEEEEEEEeCCceE---EEEEEEEE-eecCCeeeeCCCceEEecCceEEE
Q psy11701 169 APPN------PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV---YKDVYVNV-LAHAPEITEAPKDEYTVDGKTVVL 238 (745)
Q Consensus 169 ~~~~------~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~---~~~~~l~v-~~~~p~~~~~~~~~~v~~g~~~~l 238 (745)
.... .......+.|.|.....+|+|.|+|.|.|..+.. ...+.+.+ ...+|.+...+.. +.+|+.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l 240 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNV 240 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEE
Confidence 3210 0111112357787777778899999999987652 33333322 2346776655444 678999999
Q ss_pred EEEEeecC-CC-eEEEeeCCEEccCc---eEEEeecC------cEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 239 TCRVFGAP-KP-EVNWIHNQKELTGG---RYTILETG------DLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 239 ~C~~~~~p-~~-~i~W~~~~~~~~~~---~~~~~~~~------~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
.|.+.+.+ .+ .+.|+++|..+... ......++ .|.|..+..+|.|.|+|.|.|..+..
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 99999854 43 79999999877432 12222222 47888888999999999999998864
No 80
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.97 E-value=8e-30 Score=254.05 Aligned_cols=266 Identities=19% Similarity=0.269 Sum_probs=201.2
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
.|+.+...+.+..+.+|++++|.|.+.+. +.|++++.. ..++......++|.|.+++.+|+|.|+|.+.+..+
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 75 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP---HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPL 75 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS---SCEECCBTTEEEEEESSCCGGGCSCEEECCCC---
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC---ceEEeccCceEEEEEcccccccCEEEEEEEccCCC
Confidence 35667788889999999999999999873 999976532 11222223346899999999999999999998776
Q ss_pred eeEEEEEEEEEEecCe-EEecCceeEeeCCCeEEEEEEEeecCC--CeEEEEeC-CEeccCCCCCCceeecCceEEEccC
Q psy11701 112 EAKSYSIDLSVLAAPY-FTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHN-GKPISQAPPNPRRKVGPNRITIENL 187 (745)
Q Consensus 112 ~~~~~~~~l~V~~~p~-~~~~~~~~~v~~G~~~~l~C~~~~~p~--~~v~W~~~-g~~~~~~~~~~~~~~~~~~L~i~~v 187 (745)
.. +..+.|.|..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+.... ......+..|.|.++
T Consensus 76 ~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~~L~i~~~ 151 (292)
T 4dkd_C 76 GG-SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHT--NYSFSPWHGFTIHRA 151 (292)
T ss_dssp -C-CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSC--CEECCSSSCCEETTC
T ss_pred Cc-ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCC--cccccCCceEEECCC
Confidence 65 4778899988776 466678888999999999999987 44 68999997 44443211 112223456999999
Q ss_pred CCCCCEEEEEEEEeCCceEEE-EEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeecCC-CeEEEeeCCEEccCc
Q psy11701 188 RKSDTGNYGCNATNSLGYVYK-DVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGAPK-PEVNWIHNQKELTGG 262 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~~~-~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~~~ 262 (745)
..+|+|.|+|.+.|..+.... .+.|.|.. .+|.+...+....+.+|+.++|.|.+.+.|. ..+.|++++..+...
T Consensus 152 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~ 231 (292)
T 4dkd_C 152 KFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIP 231 (292)
T ss_dssp CGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCC
T ss_pred CHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccC
Confidence 999999999999988775543 57777764 3788888888877789999999999998765 478899988765422
Q ss_pred eEEE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 263 RYTI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 263 ~~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
.... ...+.|.|.++..+|+|.|+|.|.|..|..+..+.|.|....
T Consensus 232 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 232 QQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp BEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred ccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 2111 123479999999999999999999999999999888887643
No 81
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.2e-28 Score=244.92 Aligned_cols=264 Identities=16% Similarity=0.226 Sum_probs=204.9
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
..+|.|...+....+.+|+++.|.|.+.+ .+.|+|++..+. ......+.|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~------~~~~~~~~L~i~~~~~~d~G~Y~C~~~n- 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNE------MVENKKNEWIQEKAEATRTGTYTCSNSN- 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSC------EEEECSSEEEETTCCGGGCEEEEEEESS-
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCccee------eecCCCceEEEeccCHHhCeEEEEEeeC-
Confidence 34688887888889999999999999987 899999998761 1223348999999999999999999999
Q ss_pred CceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCC-CeEEEe-eCCEEccC-ceEEEeecCcEEEcccCC
Q psy11701 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK-PEVNWI-HNQKELTG-GRYTILETGDLKITDVAF 279 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-~~i~W~-~~~~~~~~-~~~~~~~~~~l~i~~~~~ 279 (745)
|. ...+.|.|.. +|.+...+....+.+|+.+.|.|.+.+ |. +.+.|+ +++..+.. .++.....+.|.|.++..
T Consensus 79 -g~-~~~~~l~V~~-~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~ 154 (290)
T 2o26_X 79 -GL-TSSIYVFVRD-PAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKR 154 (290)
T ss_dssp -SC-EEEEEEEEEC-SSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCG
T ss_pred -Cc-cEEEEEEEeC-CCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccH
Confidence 44 6667888875 444446677788899999999999985 77 899994 67777654 344555567899999999
Q ss_pred CCCE-EEEEEEEeCCceEE-EEEEEEEe----ecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeec---
Q psy11701 280 ADSG-EYTCFARNKLGTAQ-GSGSLTVK----EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI--- 350 (745)
Q Consensus 280 ~d~G-~Y~C~~~n~~g~~~-~~~~l~v~----~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~--- 350 (745)
+|+| .|+|.|.|..+... ..+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+ ..+.|++++..+
T Consensus 155 ~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p-~~i~W~~~~~~~~~~ 233 (290)
T 2o26_X 155 AYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTS-VNSMWLKMNPQPQHI 233 (290)
T ss_dssp GGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTT-CEEEEEEESSSEEEC
T ss_pred HHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcc-eeEEEecCCCCCccc
Confidence 9999 99999999865533 35777776 66777777777788999999999999988762 359999988763
Q ss_pred -cCCCCCeEE----EcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccC
Q psy11701 351 -DFESEPRFV----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402 (745)
Q Consensus 351 -~~~~~~~~~----~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp 402 (745)
......... ......|.|..+...|.|.|+|.|.|..|.....+.|.|..+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 234 AQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred eeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 221111111 2234689999999999999999999999999888888876553
No 82
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.96 E-value=1.4e-27 Score=246.12 Aligned_cols=353 Identities=15% Similarity=0.170 Sum_probs=248.3
Q ss_pred cCCCcEEEec--CC-eEEEEEEEEec-CCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCC
Q psy11701 312 DQPEDYEVEA--GQ-SATFRCNAVSD-PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387 (745)
Q Consensus 312 ~~p~~~~~~~--g~-~~~l~C~~~~~-~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 387 (745)
..|..+.+.. .. .+.|.|..... +...+.+.|...+..... ............+.+.++.....+.|++.|.|..
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~ 81 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN-SLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDD 81 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSC-CEEEEECTTCCEEECCCCCTTSCEEEEEEEEETT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCc-eeEEEecCCcCEEEECCCCCCCEEEEEEEEEcCC
Confidence 3444455432 22 48888877532 233467777654321110 0111222345678899999999999999999998
Q ss_pred ceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEe
Q psy11701 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV 467 (745)
Q Consensus 388 g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i 467 (745)
|.+... ...+...+.+|.++.+.. .+.+++.|.|+++. ++.+.+|.|+|+..... ..+..+.+ ......+.+
T Consensus 82 g~s~~~-~~~~~~~~~~p~~l~~~~-~~~~si~l~W~~p~----~~~~~~Y~v~~~~~~~~-~~~~~~~~-~~~~~~~~i 153 (368)
T 1fnf_A 82 KESVPI-SDTIIPAVPPPTDLRFTN-IGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNE-EDVAELSI-SPSDNAVVL 153 (368)
T ss_dssp EECCCE-EEEECCCCCCCEEEEEES-CCSSCEEEEEECCT----TCCCSEEEEEEEETTCT-TCCEEEEE-CTTCCEEEE
T ss_pred CccCce-eeeecCCCcCCceeEEEE-cCCCeEEEEeeCCC----CCCCcEEEEEEEECCCC-CccEEEEc-CCCcceEEe
Confidence 854432 223333445788888876 78999999999863 36688999988765443 34455556 567889999
Q ss_pred cccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCc
Q psy11701 468 DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547 (745)
Q Consensus 468 ~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~ 547 (745)
.+|.+++.|.|+|.|.|..|.+.+.. .... .+|.+|.++.+...+.+++.|+|++|. +.|.+|.|+|+..+..
T Consensus 154 ~~L~p~t~Y~~~V~a~~~~g~s~~~~-~~~~---~~~~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~ 226 (368)
T 1fnf_A 154 TNLLPGTEYVVSVSSVYEQHESTPLR-GRQK---TGLDSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFS 226 (368)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEE-EEEE---CCCCCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCS
T ss_pred cCCCCCCEEEEEEEEEeCCCCCCCeE-eeec---CCCCCCCccEEEEccCCEEEEEEeCCC---CCcCEEEEEEecCCCC
Confidence 99999999999999999999876543 2222 346677899999989999999999874 5899999999876543
Q ss_pred ccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCc
Q psy11701 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPE 627 (745)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~ 627 (745)
....... + .....++.+.+|.|++.|.|+|.|.|..|.|+++..........+..+.+....++++.|+|+++..
T Consensus 227 ~~~~~~~----~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~ 301 (368)
T 1fnf_A 227 GRPREDR----V-PHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWDAPAV 301 (368)
T ss_dssp SCCEEEE----E-ETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSCEEEEEEEEETTEEEEEEECCSS
T ss_pred CCccEEE----e-CCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCCCeeEEEecCCCEEEEEeeCCCC
Confidence 2211111 2 4566899999999999999999999999999886543222222223333334467899999987654
Q ss_pred cccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCe
Q psy11701 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSI 691 (745)
Q Consensus 628 ~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~ 691 (745)
.+.+|.|.|+..++..... ..........+++.||.+++.|.|+|.|....|.++.+.
T Consensus 302 -----~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 302 -----TVRYYRITYGETGGNSPVQ-EFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp -----CCSEEEEEEEETTCCSCCE-EEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred -----ccceEEEEEEECCCCCccE-EEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 3689999999765433222 222344568899999999999999999999888876554
No 83
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=1.2e-28 Score=249.39 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=201.1
Q ss_pred ceeEeeCCCeEEEEEEEeec---------CCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCE-EEEEEEEeC
Q psy11701 133 EFINAAEEETVTFECKASGL---------PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTG-NYGCNATNS 202 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~~~---------p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~~~ 202 (745)
....+.+|+++.|.|.+.+. |.+.++|+|++..+.... +. ...+.|.|.+++.+|+| .|+|.|.|.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~---~~-~~~~~L~i~~v~~~D~Gs~Y~C~a~n~ 112 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLN---RR-VKNGDLWIANYTSNDSHRRYLCTVTTK 112 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECS---TT-EETTEEEESSCCGGGGGCCEEEEEECT
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccC---ce-eecceEEEcCCChHhCCCcEEEEEEeC
Confidence 34568899999999999874 557999999998766422 12 45789999999999999 999999999
Q ss_pred CceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecC-CCeEEEeeCCEEcc--CceEEEeecCcEEEcccCC
Q psy11701 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP-KPEVNWIHNQKELT--GGRYTILETGDLKITDVAF 279 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p-~~~i~W~~~~~~~~--~~~~~~~~~~~l~i~~~~~ 279 (745)
.|.......+.+...+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+. ..++... .+.|.|.++..
T Consensus 113 ~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~~~L~I~~v~~ 191 (329)
T 3oq3_B 113 NGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNLIIHNPEL 191 (329)
T ss_dssp TSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-TTEEEECSCCG
T ss_pred CCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-CCEEEEeecCh
Confidence 87765554445555566655444444466799999999999999 89999999999884 3444443 68899999999
Q ss_pred CCCEEEEEEEEeC--CceE----EEEEEEEEeecc----eeecCCCcEEEecCCeEEEEEEEEecC--CCCcEEEEeeCC
Q psy11701 280 ADSGEYTCFARNK--LGTA----QGSGSLTVKEHT----HITDQPEDYEVEAGQSATFRCNAVSDP--SLKLSIVWLRGS 347 (745)
Q Consensus 280 ~d~G~Y~C~~~n~--~g~~----~~~~~l~v~~~p----~~~~~p~~~~~~~g~~~~l~C~~~~~~--~~~~~i~W~~~~ 347 (745)
+|+|.|+|.|.|. .|.. ...+.|.|..+| .+. .|....+..|+.+.|.|.+.+.| .+.+.+.|++++
T Consensus 192 ~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g 270 (329)
T 3oq3_B 192 EDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPS 270 (329)
T ss_dssp GGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTT
T ss_pred hhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECC
Confidence 9999999999987 5442 334778887766 333 66678889999999999999998 332489999998
Q ss_pred eeccCCCCCeEEE---c---CCeEEEEecCCCCCCE-EEEEEEEeCCceEEEEEEEEE
Q psy11701 348 EPIDFESEPRFVQ---S---NDYSLTVTKSSELDSG-QYTCRAQTELDFIEAQATLTV 398 (745)
Q Consensus 348 ~~~~~~~~~~~~~---~---~~~~l~i~~~~~~~~g-~y~c~a~n~~g~~~~~~~l~v 398 (745)
..+.......... . ....|.|..+...|.| .|+|.|.|..|.....+.|.+
T Consensus 271 ~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 271 GWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp SCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred eeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 8743222211111 0 3467999999999999 999999999999888887765
No 84
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=4e-28 Score=241.29 Aligned_cols=268 Identities=19% Similarity=0.272 Sum_probs=205.0
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.+|.+...+....+.+|+++.|.|.+.+ .+.|++++..... .........|.|.+++.+|+|.|+|.+.+..
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 74 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWT----LDPESPGSTLTTRNATFKNTGTYRCTELEDP 74 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSE----ECCCSSCCEEEESSCCGGGCEEEEEECCC--
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEE----EeccCCccEEEEeeeccccCEEEEEEEeccC
Confidence 3566777788889999999999999987 5999987643221 1122345789999999999999999999888
Q ss_pred ceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCe-EEEee-CCEEcc-CceEEEeecCcEEEcccCCC
Q psy11701 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE-VNWIH-NQKELT-GGRYTILETGDLKITDVAFA 280 (745)
Q Consensus 204 g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~-i~W~~-~~~~~~-~~~~~~~~~~~l~i~~~~~~ 280 (745)
+.....+.|.|...+..+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+. ..++.....+.|.|.++..+
T Consensus 75 ~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 154 (289)
T 3ejj_X 75 MAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVL 154 (289)
T ss_dssp ---CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGG
T ss_pred CcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccc
Confidence 8877888888886444467777888899999999999998876664 99986 555553 44566666778999999999
Q ss_pred CCEEEEEEEEe-CCceEEEEEEEEEe----ecceeecCCCcEEEecCCeEEEEEEEEe-cCCCCcEEEEeeCCeeccCCC
Q psy11701 281 DSGEYTCFARN-KLGTAQGSGSLTVK----EHTHITDQPEDYEVEAGQSATFRCNAVS-DPSLKLSIVWLRGSEPIDFES 354 (745)
Q Consensus 281 d~G~Y~C~~~n-~~g~~~~~~~l~v~----~~p~~~~~p~~~~~~~g~~~~l~C~~~~-~~~~~~~i~W~~~~~~~~~~~ 354 (745)
|+|.|+|.+.+ ..+..+..+.|.|. .+|.+...+....+..|+.+.|.|.+.+ .|. +.+.|++++..+....
T Consensus 155 d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~ 232 (289)
T 3ejj_X 155 DSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVG--FNVILKRGDTKLEIPL 232 (289)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSC--CEEEEEETTEECCCCE
T ss_pred cCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCc--eEEEEEECCEEeeccC
Confidence 99999999994 44455677888887 5677777777777789999999999998 443 7999999998775321
Q ss_pred CCeE---EEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 355 EPRF---VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 355 ~~~~---~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
...+ .......|.|..+...|.|.|+|.|.|..|....++.|.+..+
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~ 282 (289)
T 3ejj_X 233 NSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVES 282 (289)
T ss_dssp EEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC--
T ss_pred CcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEec
Confidence 1100 0112457999999999999999999999999999988877533
No 85
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=2e-29 Score=256.47 Aligned_cols=268 Identities=26% Similarity=0.440 Sum_probs=138.6
Q ss_pred cCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 131 EPEFINAAEEETVTFECKASGL-PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~ 209 (745)
.+....+.+|+++.|.|.+.+. |.+.+.|+|+|..+... .+....++.|.|.+++.+|+|.|+|.+.|. |.....
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~---~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~ 89 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPS---ERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCH 89 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCc---ccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEE
Confidence 3777889999999999999886 57899999999988632 344445679999999999999999999998 766666
Q ss_pred EEEEEeec---------------------CCeeeeC----CCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceE
Q psy11701 210 VYVNVLAH---------------------APEITEA----PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264 (745)
Q Consensus 210 ~~l~v~~~---------------------~p~~~~~----~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~ 264 (745)
+.|.|... +|.+... +....+.+|+.++|.|.+.+.|.+.+.|++++..+.....
T Consensus 90 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 90 FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR 169 (334)
T ss_dssp -----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSS
T ss_pred EEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccc
Confidence 77777642 2333221 1235688999999999999999999999999987753311
Q ss_pred -----EEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeec----ceee-cCCCcEEEecCCeEEEEEEEEec
Q psy11701 265 -----TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH----THIT-DQPEDYEVEAGQSATFRCNAVSD 334 (745)
Q Consensus 265 -----~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~----p~~~-~~p~~~~~~~g~~~~l~C~~~~~ 334 (745)
.......|.|.++...|+|.|+|.+.|..|.....+.|.|... |.+. ..|....+..|+.+.|.|.+.+.
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~ 249 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSD 249 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCS
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecC
Confidence 1122347999999999999999999999999888888888763 2222 23566788999999999999987
Q ss_pred CCCCcEEEEee----CCeeccCCCCCeEEEc----------CCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEec
Q psy11701 335 PSLKLSIVWLR----GSEPIDFESEPRFVQS----------NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400 (745)
Q Consensus 335 ~~~~~~i~W~~----~~~~~~~~~~~~~~~~----------~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~ 400 (745)
|. +.+.|++ ++..+........... ....|.|..+...|.|.|+|.|.|..|.....+.|.|..
T Consensus 250 p~--p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 327 (334)
T 1ry7_B 250 AQ--PHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLP 327 (334)
T ss_dssp SC--EEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEEC
T ss_pred CC--CeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEE
Confidence 76 6899999 5555543222111111 113799999999999999999999999999999999986
Q ss_pred cCCC
Q psy11701 401 PLEA 404 (745)
Q Consensus 401 pp~~ 404 (745)
.+.+
T Consensus 328 ~~~~ 331 (334)
T 1ry7_B 328 AEEE 331 (334)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 5543
No 86
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.96 E-value=5.1e-28 Score=240.41 Aligned_cols=259 Identities=17% Similarity=0.226 Sum_probs=183.2
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccC---CcEEEEccCCCCCCEEEEEEEEeCCeee
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY---GKSLIIKHVEFSDQGSYTCEVSNGVGEA 113 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 113 (745)
.+...+..+.+|++++|.|.+.|. +.|+|++..+. .+...... .++|.|.+++.+|+|.|+|.|.+..|..
T Consensus 4 ~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (289)
T 3mjg_X 4 TPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLE 77 (289)
T ss_dssp CSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-----
T ss_pred cCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCC
Confidence 345567789999999999999864 99999998874 23333232 2589999999999999999999877653
Q ss_pred E--EEEEEEEEEecCe--EEecCc--eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccC
Q psy11701 114 K--SYSIDLSVLAAPY--FTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187 (745)
Q Consensus 114 ~--~~~~~l~V~~~p~--~~~~~~--~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v 187 (745)
. +..+.|.|..+.. +...+. ...+.+|+++.|.|.+. .|.+.++|++++...... ... .....+.
T Consensus 78 ~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~---~~~-~~~~~~~---- 148 (289)
T 3mjg_X 78 TDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP---VPY-DHQRGFS---- 148 (289)
T ss_dssp -CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC---CCE-ETTTEEE----
T ss_pred cCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc---eee-cCCcCee----
Confidence 3 2445555553332 212222 16789999999999999 578899999875322211 011 1112222
Q ss_pred CCCCCEEEEEEEEeCCceEEEE-EEEEEee-cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc---
Q psy11701 188 RKSDTGNYGCNATNSLGYVYKD-VYVNVLA-HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~~~~-~~l~v~~-~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--- 262 (745)
...|+|.|+|.|.|..+..... ..|.|.. .+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++......
T Consensus 149 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~ 228 (289)
T 3mjg_X 149 GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEP 228 (289)
T ss_dssp ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCC
T ss_pred eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccc
Confidence 3579999999999877665433 5566654 4677777777778999999999999999999999999876543211
Q ss_pred eEEE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeeccee
Q psy11701 263 RYTI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310 (745)
Q Consensus 263 ~~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~ 310 (745)
.... ...+.|.|.++..+|+|.|+|.|.|..|....++.|.|...+..
T Consensus 229 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 229 VTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp EEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC--
T ss_pred cccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecC
Confidence 1111 12357999999999999999999999999999999999876643
No 87
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=9.6e-29 Score=248.83 Aligned_cols=267 Identities=15% Similarity=0.181 Sum_probs=181.7
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC-
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV- 110 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~- 110 (745)
+|+.+...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+... ......+..|.|.+++.+|+|.|+|.|.+..
T Consensus 23 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 98 (316)
T 3vh8_G 23 DKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI--FHGRIFQESFNMSPVTTAHAGNYTCRGSHPHS 98 (316)
T ss_dssp -CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH--HHHCCBSSCEEECSCCGGGCEEEEEEEBCSSS
T ss_pred CCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee--ecCCcceEEEEECCCCcccCeEEEEEEEcCCC
Confidence 3455556666 678999999999999877 6799999999876532 1112345689999999999999999998632
Q ss_pred ---eeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce--eecCceE
Q psy11701 111 ---GEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR--KVGPNRI 182 (745)
Q Consensus 111 ---g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~~L 182 (745)
....+..+.|.|.. +|.+...+... +.+|++++|.|.+.+ +.+.+.|+|+|..+......... ......|
T Consensus 99 ~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L 176 (316)
T 3vh8_G 99 PTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANF 176 (316)
T ss_dssp SSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEE
T ss_pred CcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEE
Confidence 22233556777754 45666666654 889999999999954 56799999999876422111111 1234689
Q ss_pred EEccCCCCCCEEEEEEEEeCCceE-----EEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeC
Q psy11701 183 TIENLRKSDTGNYGCNATNSLGYV-----YKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~~~~~~g~~-----~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~ 255 (745)
.|.+++.+|+|.|+|.|.|..|.. ...+.|.|.. .+|.+...+.. .+.+|+.++|.|.+. .+.+.+.|+++
T Consensus 177 ~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~W~k~ 254 (316)
T 3vh8_G 177 SIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGP-KVQAGESVTLSCSSR-SSYDMYHLSRE 254 (316)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCS-CCCTTSCCEEEEEES-SCCSEEEEEET
T ss_pred EECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCC-eecCCCcEEEEEECC-CCCcEEEEEEC
Confidence 999999999999999999987631 3335566643 35666655543 568899999999997 46789999999
Q ss_pred CEEccCceEE-Ee----ecCcEEEcccCCCCCEEEEEEEEeCCce-----EEEEEEEEEeecc
Q psy11701 256 QKELTGGRYT-IL----ETGDLKITDVAFADSGEYTCFARNKLGT-----AQGSGSLTVKEHT 308 (745)
Q Consensus 256 ~~~~~~~~~~-~~----~~~~l~i~~~~~~d~G~Y~C~~~n~~g~-----~~~~~~l~v~~~p 308 (745)
+..+...... .. ....|.|.+++ |+|.|+|.+.|..+. .+..+.|.|..+|
T Consensus 255 g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 255 GGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp TSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred CCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 8766432111 11 12469999998 999999999997653 2445556665443
No 88
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=3.1e-27 Score=237.54 Aligned_cols=267 Identities=18% Similarity=0.229 Sum_probs=199.1
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecCCC-----eEEEEeCCEeccCC----------CCCCce---------eecCceEE
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLPEP-----EIHWVHNGKPISQA----------PPNPRR---------KVGPNRIT 183 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~-----~v~W~~~g~~~~~~----------~~~~~~---------~~~~~~L~ 183 (745)
+...|....+..|++++|.|.+.+.+.+ .++|+|+|...... ....+. ...+.+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 3456778888999999999999886554 49999987643210 001111 11345799
Q ss_pred EccCCCCCCEEEEEEEE-eCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEe-ecCCCeEEEeeCCEEccC
Q psy11701 184 IENLRKSDTGNYGCNAT-NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKELTG 261 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~-~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~ 261 (745)
|.+++.+|+|.|+|.+. +..+.....+.|.+.. +|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+..
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~-~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~ 161 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA-KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPN 161 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBB-CCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeecc-CCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccc
Confidence 99999999999999986 4456666667777764 66666666666777889999999865 678899999999876643
Q ss_pred ceEEE-eec------CcEEEcccCCCCCEEEEEEEEeCCce--EEEEEEEEEeecceeec-CCCcEEEecCCeEEEEEEE
Q psy11701 262 GRYTI-LET------GDLKITDVAFADSGEYTCFARNKLGT--AQGSGSLTVKEHTHITD-QPEDYEVEAGQSATFRCNA 331 (745)
Q Consensus 262 ~~~~~-~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~~p~~~~-~p~~~~~~~g~~~~l~C~~ 331 (745)
..... ..+ ..|.|.....+|+|.|+|.|.|..+. ....+.|.|..+|.+.. .+....+..|+.+.|.|.+
T Consensus 162 ~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~ 241 (313)
T 4fqp_A 162 TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDA 241 (313)
T ss_dssp EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEE
T ss_pred cceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEe
Confidence 32221 111 24888899999999999999997655 45566777777777643 3344556778999999999
Q ss_pred EecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 332 ~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
.|.|.+ ..+.|++++..+.. . . ...+..|.|..+...|.|.|+|.|.|..|.....+.|.|..+
T Consensus 242 ~g~P~p-~~v~W~~~~~~l~~--~-~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 305 (313)
T 4fqp_A 242 RSNPEP-TGYNWSTTMGPLPP--F-A--VAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEG 305 (313)
T ss_dssp EEESCC-CEEEEEETTBSCCT--T-E--EEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred cCCCCC-cEEEEEECCEECCC--c-e--EEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeC
Confidence 998863 47999999987752 1 1 223458999999999999999999999999999999988754
No 89
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=4e-28 Score=248.42 Aligned_cols=269 Identities=17% Similarity=0.224 Sum_probs=173.7
Q ss_pred CceeEeeCCCeEEEEEEEeecCC-----------CeEEEEeCCEec------cCCCCCCceeecCceEEEccCCCCCCEE
Q psy11701 132 PEFINAAEEETVTFECKASGLPE-----------PEIHWVHNGKPI------SQAPPNPRRKVGPNRITIENLRKSDTGN 194 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p~-----------~~v~W~~~g~~~------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 194 (745)
.....+.+|+++.|.|.+.+.|. +.+.|+|++... .......+.....+.|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 45667899999999999987554 899999988421 1011223445567899999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCCeee---eCCCceEEecCceEEEEEEE-----eecCCCeEEEeeCCEEccCceEEE
Q psy11701 195 YGCNATNSLGYVYKDVYVNVLAHAPEIT---EAPKDEYTVDGKTVVLTCRV-----FGAPKPEVNWIHNQKELTGGRYTI 266 (745)
Q Consensus 195 Y~C~~~~~~g~~~~~~~l~v~~~~p~~~---~~~~~~~v~~g~~~~l~C~~-----~~~p~~~i~W~~~~~~~~~~~~~~ 266 (745)
|+|.+.|..+.....+.|.|...+..+. ..+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.......
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~ 173 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI 173 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEE
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcccee
Confidence 9999999999888888898886333222 12334567889999999985 677889999999999886533233
Q ss_pred eecCcEEEcccCCCCCEEEEEEEEeCC-ceE---EEEEEEEEee------cceeecCCCcE--EEecCCeEEEEEEEEec
Q psy11701 267 LETGDLKITDVAFADSGEYTCFARNKL-GTA---QGSGSLTVKE------HTHITDQPEDY--EVEAGQSATFRCNAVSD 334 (745)
Q Consensus 267 ~~~~~l~i~~~~~~d~G~Y~C~~~n~~-g~~---~~~~~l~v~~------~p~~~~~p~~~--~~~~g~~~~l~C~~~~~ 334 (745)
.....|.|.+++.+|+|.|+|.|.|.. |.. ...+.|.|.. +|.+...+... .+..|+.+.|.|.+.+.
T Consensus 174 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~ 253 (349)
T 4dep_C 174 PEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFS 253 (349)
T ss_dssp EETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEEC
T ss_pred ecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEc
Confidence 344579999999999999999999976 443 5667777765 45444444322 67889999999999964
Q ss_pred C--CCCcEEEEeeCCeeccCC-CCCeE----E------EcCCeEEEEecCCCCCC-EEEEEEEEeCCceEEEEEEEEEec
Q psy11701 335 P--SLKLSIVWLRGSEPIDFE-SEPRF----V------QSNDYSLTVTKSSELDS-GQYTCRAQTELDFIEAQATLTVQV 400 (745)
Q Consensus 335 ~--~~~~~i~W~~~~~~~~~~-~~~~~----~------~~~~~~l~i~~~~~~~~-g~y~c~a~n~~g~~~~~~~l~v~~ 400 (745)
+ .+.+.+.|++++..+... ..... . ......|.|..+...|. |.|+|.|.|..|.....+.|.+..
T Consensus 254 ~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 254 FLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp CCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred cCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 1 124799999998876531 11110 0 00123489999999999 999999999999999888888864
No 90
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.96 E-value=5.5e-28 Score=242.25 Aligned_cols=280 Identities=13% Similarity=0.091 Sum_probs=200.7
Q ss_pred CcEEEecCCeEEEEEEEEec--CC-CCcEEEEeeCCeeccCCCCCeEEEcCC--eEEEEecCCCCCCEEEEEEEEeCCce
Q psy11701 315 EDYEVEAGQSATFRCNAVSD--PS-LKLSIVWLRGSEPIDFESEPRFVQSND--YSLTVTKSSELDSGQYTCRAQTELDF 389 (745)
Q Consensus 315 ~~~~~~~g~~~~l~C~~~~~--~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~~~g~y~c~a~n~~g~ 389 (745)
....+..|++++|.|.+.+. +. +.+.+.|++++..+... ......... +.|.|.++...|.|.|.|.+.+..+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 45667899999999999986 21 23779999999877421 111111222 67999999999999999998765555
Q ss_pred EEEEEEEEEeccCCCCCCceeEEee-cCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCC----CceeEEEEccCceeE
Q psy11701 390 IEAQATLTVQVPLEAPSNFTLIQVI-DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE----GSIRELIVNKGESTT 464 (745)
Q Consensus 390 ~~~~~~l~v~~pp~~P~~~~~~~~~-~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~----~~~~~~~~~~~~~~~ 464 (745)
....+.|.+..||.+|.++.+.. . ..+++++.|+++.. .+ ....|.|+|+...... ..+..... ......
T Consensus 87 ~~~~~~l~v~~~P~~P~~l~c~~-~~~~~~~~~~W~~~~~--~~-~~~~Y~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 161 (313)
T 2d9q_B 87 ILDQVELRAGYPPAIPHNLSCLM-NLTTSSLICQWEPGPE--TH-LPTSFTLKSFKSRGNCQTQGDSILDCVP-KDGQSH 161 (313)
T ss_dssp EEEEEEEEECCCCCCCEEEEEEE-ETTTTEEEEEEECCSC--CS-SCCEEEEEEEECCTTSCSCCCCEEEECC-CTTCSE
T ss_pred eEEEEEEccCCCCCCCccceeeE-CCCCccEEEEecCCCC--CC-CceeEEEEEEecCCCcccCCcccccCCC-CCCCcE
Confidence 55678888889999999999876 5 36899999998643 22 2457999988654321 11222211 223345
Q ss_pred EEe--cccccCcceeEEEEEecCCCCCCCCcceEEeCCC-CCCCCCCceeEEEc------CCceEEEEeeCCCCCCCcee
Q psy11701 465 TEV--DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE-GVPGTVQSLEAIPL------GSSAFYLKWVKPEQPNGVLM 535 (745)
Q Consensus 465 ~~i--~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~-~~P~~p~~~~~~~~------~~~~i~l~W~~p~~~~g~i~ 535 (745)
+++ .+|.+++.|.|+|.|.|..|.+. +..+.+.+.. .+|++|.++.+... ..+++.|+|++|...++.++
T Consensus 162 ~~~~~~~L~~~~~Y~f~V~A~N~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l 240 (313)
T 2d9q_B 162 CSIPRKHLLLYQNMGIWVQAENALGTSM-SPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQ 240 (313)
T ss_dssp EEEEGGGCCSSSCEEEEEEEEETTEEEE-CCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCE
T ss_pred EEECccccccceeEEEEEEEECCCCCcc-CccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeE
Confidence 555 45999999999999999999864 3345555443 46888988887765 46899999999876555568
Q ss_pred eEEEEEE-EcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCC
Q psy11701 536 GYKIKYQ-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606 (745)
Q Consensus 536 ~Y~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~ 606 (745)
+|.|+|+ ..+...|.... ........+.|.+|.|++.|.|+|+|.|..|.|.+|+++..+...+..
T Consensus 241 ~Y~v~y~~~~~~~~w~~~~-----~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 241 KCELRHKPQRGEASWALVG-----PLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp EEEEEEEESSSCCCCEEEE-----EECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred EEEEEEccCCCCCCcEEcc-----cccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 9999999 55444443221 113345789999999999999999999999999988777655555554
No 91
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=5.8e-29 Score=253.49 Aligned_cols=276 Identities=17% Similarity=0.247 Sum_probs=213.3
Q ss_pred EEEecCeEEecCceeEeeCCCeEEEEEEEe-------ecCCCeEEEEeCCEeccCCCC-CCceeecCceEEEccCCCCCC
Q psy11701 121 SVLAAPYFTVEPEFINAAEEETVTFECKAS-------GLPEPEIHWVHNGKPISQAPP-NPRRKVGPNRITIENLRKSDT 192 (745)
Q Consensus 121 ~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~-------~~p~~~v~W~~~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~ 192 (745)
.....|.+...|....+.+|+++.|.|.+. +.|.+.+.|+|+|..+..... ..+....++.|.|.+++.+|+
T Consensus 14 ~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 93 (339)
T 3o4o_C 14 AARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDS 93 (339)
T ss_dssp ----CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCC
T ss_pred cchhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccC
Confidence 445678899999999999999999999998 888899999999987532222 445556778999999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecCCee-eeCCCceEEecCceEEEEEE-----EeecCCCeEEEeeCCEEccC--ceE
Q psy11701 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCR-----VFGAPKPEVNWIHNQKELTG--GRY 264 (745)
Q Consensus 193 G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~-~~~~~~~~v~~g~~~~l~C~-----~~~~p~~~i~W~~~~~~~~~--~~~ 264 (745)
|.|+|.+.|..|.....+.|.|...++.. ........+.+|+.+.|.|. +.+.|.+.+.|++++..+.. .++
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 99999999999988888888888644322 12222346789999999999 78888899999999988754 345
Q ss_pred EEeec-CcEEEcccCCCCCEEEEEEEEeCCc----eEEEEEEEEEee-----cceeecCCCcEEEecCCeEEEEEEE---
Q psy11701 265 TILET-GDLKITDVAFADSGEYTCFARNKLG----TAQGSGSLTVKE-----HTHITDQPEDYEVEAGQSATFRCNA--- 331 (745)
Q Consensus 265 ~~~~~-~~l~i~~~~~~d~G~Y~C~~~n~~g----~~~~~~~l~v~~-----~p~~~~~p~~~~~~~g~~~~l~C~~--- 331 (745)
..... +.|.|.++...|+|.|+|.|.|..| .....+.|.|.. +|.+...+....+..|+.+.|.|.+
T Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~ 253 (339)
T 3o4o_C 174 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLG 253 (339)
T ss_dssp EECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEES
T ss_pred EEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECC
Confidence 44433 4799999999999999999999887 456777888864 4456666666778899999999999
Q ss_pred EecCCCCcEEEEeeCCeeccCC-------CCCeEEEcCCe------EEEEecCCCCCC-EEEEEEEEeCCceEEEEEEEE
Q psy11701 332 VSDPSLKLSIVWLRGSEPIDFE-------SEPRFVQSNDY------SLTVTKSSELDS-GQYTCRAQTELDFIEAQATLT 397 (745)
Q Consensus 332 ~~~~~~~~~i~W~~~~~~~~~~-------~~~~~~~~~~~------~l~i~~~~~~~~-g~y~c~a~n~~g~~~~~~~l~ 397 (745)
.+.|. .+.+.|++++..+... ...++....++ .|.|..+...|. |.|+|.|.|..|.....+.+.
T Consensus 254 ~g~P~-~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~ 332 (339)
T 3o4o_C 254 TGTPL-TTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332 (339)
T ss_dssp SSCCS-SCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCC
T ss_pred CCCCC-CceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhh
Confidence 67763 3789999988765421 11222222232 699999999997 999999999999887665544
No 92
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=7.8e-27 Score=228.31 Aligned_cols=241 Identities=21% Similarity=0.293 Sum_probs=194.0
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCC-eEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEP-EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.|.|...|....+.+|+.+.|.|.+.+.|.+ .++|+|+|..+... ...|.|.+++.+|+|.|+|.+.|..
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~---------~~~l~i~~~~~~d~G~Y~C~~~~~~ 71 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS---------TPSYRITSASVNDSGEYRCQRGLSG 71 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC---------SSEEEESSCCGGGCEEEEEEESSSC
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc---------CCeEEEecCCcccCeEEEEEEecCC
Confidence 4778888999899999999999999988887 99999999988632 5689999999999999999998765
Q ss_pred ceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCCC
Q psy11701 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282 (745)
Q Consensus 204 g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 282 (745)
+.. .+.|.|.. ++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ...+.|.|.+++..|+
T Consensus 72 ~s~--~~~l~v~~-~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~----~~~~~l~i~~~~~~d~ 143 (262)
T 3rjd_A 72 RSD--PIQLEIHR-GW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF----HWNSNLTILKTNISHN 143 (262)
T ss_dssp CCC--CEEEEEEC-SS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE----EECCCEEESSCCGGGC
T ss_pred ccc--cEEEEEec-cc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc----CCCCeEEEEECChhhC
Confidence 543 45566653 33 3444556678899999999999 66677899999999877432 2356899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEee---cceeecCCCcEEEecCCeEEEEEEEEecCC-CC--cEEEEeeCCeeccCCCCC
Q psy11701 283 GEYTCFARNKLGTAQGSGSLTVKE---HTHITDQPEDYEVEAGQSATFRCNAVSDPS-LK--LSIVWLRGSEPIDFESEP 356 (745)
Q Consensus 283 G~Y~C~~~n~~g~~~~~~~l~v~~---~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~-~~--~~i~W~~~~~~~~~~~~~ 356 (745)
|.|+|.+.|..+..+..+.|.|.. +|.+...+ ...+..|+.+.|.|.+.+.|. +. ..+.|++++..+..
T Consensus 144 G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~---- 218 (262)
T 3rjd_A 144 GTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG---- 218 (262)
T ss_dssp EEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE----
T ss_pred EEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc----
Confidence 999999999998888888888875 34444444 455788999999999998864 22 45789999887642
Q ss_pred eEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceE
Q psy11701 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390 (745)
Q Consensus 357 ~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 390 (745)
......|.|..+...|.|.|+|.|.|..|..
T Consensus 219 ---~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 219 ---RNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ---EESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ---cCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 2345689999999999999999999999964
No 93
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.96 E-value=1.1e-28 Score=280.53 Aligned_cols=295 Identities=18% Similarity=0.157 Sum_probs=213.5
Q ss_pred CCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccC------------CCCceeEEEEcc---------Cc
Q psy11701 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD------------GEGSIRELIVNK---------GE 461 (745)
Q Consensus 403 ~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~------------~~~~~~~~~~~~---------~~ 461 (745)
..|.++++.. .+.+++.|+|+++.. ..++++.+|.|+|+.... +...|....+.. ..
T Consensus 470 ~~~~~l~v~~-~s~~sv~LsW~~p~~-~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~ 547 (897)
T 2dtg_E 470 NELLKFSYIR-TSFDKILLRWEPYWP-PDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQN 547 (897)
T ss_dssp CCBCCCSEEE-ECSSCEEEECCCCCS-SSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSS
T ss_pred cceeEEEEEE-EecCeEEEEecCCCC-CCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccc
Confidence 3456788887 899999999998643 344589999998876421 111222111100 02
Q ss_pred eeEEEecccccCcceeEEEEE-ecCCCC----CCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceee
Q psy11701 462 STTTEVDKFVPASKNFARVLA-FNGAYN----GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536 (745)
Q Consensus 462 ~~~~~i~~L~~~~~Y~~~V~a-~n~~G~----g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~ 536 (745)
...+++.+|+|++.|.|+|.| .|..|. |.+|..+.++|.+++|++|.++.+...+.++|.|+|++|.+.+|.|++
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~ 627 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITH 627 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSE
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeE
Confidence 578999999999999999999 999998 788888999999999999999999999999999999999888999999
Q ss_pred EEEEEEEcCCcccC--------------------------------------------------------------Cccc
Q psy11701 537 YKIKYQSVKGTKVG--------------------------------------------------------------PLLE 554 (745)
Q Consensus 537 Y~v~~~~~~~~~~~--------------------------------------------------------------~~~~ 554 (745)
|.|+|+........ .|..
T Consensus 628 Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~ 707 (897)
T 2dtg_E 628 YLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFED 707 (897)
T ss_dssp EECCEEEECCCCSCTTCSSSCSCCCCCC----------------------------------------------------
T ss_pred EEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEE
Confidence 99999875431000 0000
Q ss_pred ----cc---------cc----------------ccCCCcceeeecCCCCCccEEEEEEEEecCCCCCC---cceeeeccc
Q psy11701 555 ----RL---------PY----------------ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE---SKYLFYVPF 602 (745)
Q Consensus 555 ----~~---------~~----------------~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~---S~~~~~~~~ 602 (745)
.. .. ...+..+++++.+|.|++.|+|+|.|.|..|.|++ +..+...+.
T Consensus 708 ~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~ 787 (897)
T 2dtg_E 708 YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM 787 (897)
T ss_dssp ----------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECC
T ss_pred ccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEecc
Confidence 00 00 00124478999999999999999999999998775 333322221
Q ss_pred ------CCCCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEE
Q psy11701 603 ------KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676 (745)
Q Consensus 603 ------~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i 676 (745)
..+..+.+....+++|.|+|++|. ..+|.|.+|.|.|+..+. .+....+.
T Consensus 788 ~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~--~~nG~I~~Y~V~y~~~~~--~~~~~~~~-------------------- 843 (897)
T 2dtg_E 788 PEAKADDIVGPVTHEIFENNVVHLMWQEPK--EPNGLIVLYEVSYRRYGD--EELHLCDT-------------------- 843 (897)
T ss_dssp CCCCCCCCCCCCCCCSSSSSCCCCCCCCCC--SCSSCEEEECCCCBSSSB--CCCCCCCC--------------------
T ss_pred CccCCCCCCcceEEEeCCCCEEEEEECCCC--CCCCCEEEEEEEEEECCC--cceEEEEe--------------------
Confidence 112233334456789999998764 478899999999986532 11000000
Q ss_pred EEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeCCCCC
Q psy11701 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGG 742 (745)
Q Consensus 677 ~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~~~ 742 (745)
.......+.+.|.+|.|+ .|.|+|+|.|.+|.|++|+++.|+|++.+
T Consensus 844 ------------------~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p 890 (897)
T 2dtg_E 844 ------------------RKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYL 890 (897)
T ss_dssp ------------------SSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC
T ss_pred ------------------eeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCC
Confidence 000235677889999999 69999999999999999999999997764
No 94
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=1.9e-26 Score=231.17 Aligned_cols=251 Identities=20% Similarity=0.243 Sum_probs=189.1
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCC-CCeEec---cCCcEEEEccCCCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQG---NYGKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~-~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
|+.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+... .++... .....|.|.+++.+|+|.|+|.|.+
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATN 83 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEc
Confidence 566778889999999999999999999999999999999998754 344432 2224899999999999999999999
Q ss_pred CCeeeEEEEEEEEEEecCeEEec-----CceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee-ecCceE
Q psy11701 109 GVGEAKSYSIDLSVLAAPYFTVE-----PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK-VGPNRI 182 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~~~~~-----~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~L 182 (745)
..|... ..+.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......... .....|
T Consensus 84 ~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l 162 (305)
T 2nzi_A 84 QGGSVS-GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (305)
T ss_dssp TTEEEE-EEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEE
T ss_pred CCCCcc-ceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEE
Confidence 988754 7788999887765432 356778899999999999999999999999998886432221111 134689
Q ss_pred EEcc-CCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEE--ecCceEEEEEEE--------------eec
Q psy11701 183 TIEN-LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT--VDGKTVVLTCRV--------------FGA 245 (745)
Q Consensus 183 ~i~~-v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v--~~g~~~~l~C~~--------------~~~ 245 (745)
.|.+ +..+|+|.|+|.|.|..|.....+.|.|...| .. |....+ ..+..+.|.|.. ...
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P-~~---p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~ 238 (305)
T 2nzi_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP-DP---PRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKC 238 (305)
T ss_dssp EETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC-CC---CEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEE
T ss_pred EEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC-CC---CCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEe
Confidence 9999 99999999999999999999888888887532 11 111111 234556666653 222
Q ss_pred CCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEE
Q psy11701 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297 (745)
Q Consensus 246 p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 297 (745)
+.....|.+.+.. ....|.|.++...+.|.|+|.|.|..|...
T Consensus 239 ~~~~~~w~~~~~~---------~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 239 ATTAERWLRVGQA---------RETRYTVINLFGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp ETTSCCEEEEEEE---------SSSEEEECSCCSSCEEEEEEEEEETTEECC
T ss_pred cCCCCccEECccc---------cCceEEecCCCCCCeEEEEEEEEeCCcccC
Confidence 2222333332211 245799999999999999999999998753
No 95
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=2.5e-28 Score=246.03 Aligned_cols=265 Identities=17% Similarity=0.207 Sum_probs=205.1
Q ss_pred ceeEeeCCCeEEEEEEEeecC-CCeEEEEeCCEeccCC-CCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 133 EFINAAEEETVTFECKASGLP-EPEIHWVHNGKPISQA-PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~~g~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~ 210 (745)
....+.+|+++.|.|.+.+.+ .+.+.|+|+|..+... ....+....++.|.|.+++.+|+|.|+|.+.|..|.....+
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 92 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 92 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEEC
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEE
Confidence 356789999999999998877 7799999998754322 22345555677999999999999999999999988877777
Q ss_pred EEEEeecCCeeeeCCC---ceEEecCceEEEEEEE------eecCCCeEEEeeCCEEccCc-eEEEeecCcEEEcccCCC
Q psy11701 211 YVNVLAHAPEITEAPK---DEYTVDGKTVVLTCRV------FGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280 (745)
Q Consensus 211 ~l~v~~~~p~~~~~~~---~~~v~~g~~~~l~C~~------~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~l~i~~~~~~ 280 (745)
.+.+...+|.+...+. ...+..|+++.|.|.+ .+.|.+.+.|++++..+... .......+.|.|.++...
T Consensus 93 ~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~ 172 (315)
T 1itb_B 93 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEK 172 (315)
T ss_dssp CCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGG
T ss_pred EEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceeh
Confidence 7777666666544432 3467889999999998 78888999999999988532 222345678999999999
Q ss_pred CCEEEEEEEE-eCCceE---EEEEEEEEe-----ecceeecCCCc-EEEecCCeEEEEEEEEecCCCCcEEEEeeCCeec
Q psy11701 281 DSGEYTCFAR-NKLGTA---QGSGSLTVK-----EHTHITDQPED-YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350 (745)
Q Consensus 281 d~G~Y~C~~~-n~~g~~---~~~~~l~v~-----~~p~~~~~p~~-~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~ 350 (745)
|+|.|+|.|. |..|.. ...+.+.+. .+|.+...+.. ..+..|+.+.|.|.+.+.|. +.+.|++++..+
T Consensus 173 d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~--p~i~W~~~g~~i 250 (315)
T 1itb_B 173 HRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS--DIAYWKWNGSVI 250 (315)
T ss_dssp GCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTT--SEEEEEETTEEC
T ss_pred hCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCC--CeeEEEECCEEC
Confidence 9999999999 777775 334444443 45666555543 46789999999999999886 679999999988
Q ss_pred cCCCCCe----EEEc---------CCeEEEEecCCCCC-CEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 351 DFESEPR----FVQS---------NDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 351 ~~~~~~~----~~~~---------~~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
....... .... ....|.|..+...| .|.|+|.|.|..|.....+.|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 7533211 1111 12489999999999 999999999999999988888764
No 96
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=1.8e-27 Score=244.65 Aligned_cols=304 Identities=16% Similarity=0.190 Sum_probs=216.8
Q ss_pred eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccC-----------CCCCCceee-------cCceEEEccCCCCCCEEE
Q psy11701 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ-----------APPNPRRKV-------GPNRITIENLRKSDTGNY 195 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~-----------~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y 195 (745)
...+.+|+++.|.|.+.+.|.+.+.|+|++..+.. .....++.. ....|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 34678999999999999889999999999854210 111223321 356899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEc
Q psy11701 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKIT 275 (745)
Q Consensus 196 ~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~ 275 (745)
+|.+.|..+ .+.|.|.. +...|. ..+.+|++++|.|.+.+.|.+.+.|++++..+ ....+.|.|.
T Consensus 83 ~C~~~n~~~----~~~l~V~~----~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~ 147 (363)
T 1wio_A 83 ICEVEDQKE----EVQLLVFG----LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVS 147 (363)
T ss_dssp EEEETTEEE----EEEEEEEE----EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCE------EEESSEEEEC
T ss_pred EEEEEECCC----cEEEEEEe----CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc------cccceEEEEe
Confidence 999987643 45566653 223332 46789999999999999898999999987543 2356789999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecC---CCCcEEEEeeCCeeccC
Q psy11701 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP---SLKLSIVWLRGSEPIDF 352 (745)
Q Consensus 276 ~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~---~~~~~i~W~~~~~~~~~ 352 (745)
++..+|+|.|+|.|.|..+.....+.+.|...|.. +....+..|+.+.|.|.+.+.+ .+.+.+.|++++..+..
T Consensus 148 ~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 148 QLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSK 224 (363)
T ss_dssp SBCGGGCEECEEEEEETTEEEEECCEECEECCSCS---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCC
T ss_pred eCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccc
Confidence 99999999999999998777777777777755532 3556678899999999887732 12478999999887653
Q ss_pred C------CCCeEEEc-----------C--CeEEEEecCCCCCCEEEEEEEEeC--CceEEEEEEEEEeccCCCCCCceeE
Q psy11701 353 E------SEPRFVQS-----------N--DYSLTVTKSSELDSGQYTCRAQTE--LDFIEAQATLTVQVPLEAPSNFTLI 411 (745)
Q Consensus 353 ~------~~~~~~~~-----------~--~~~l~i~~~~~~~~g~y~c~a~n~--~g~~~~~~~l~v~~pp~~P~~~~~~ 411 (745)
. ....+... . ...|.|..+...|.|.|+|.|.|. .|.....+.|.|...++.+..+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~ 304 (363)
T 1wio_A 225 SWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCE 304 (363)
T ss_dssp CEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEE
T ss_pred eEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEE
Confidence 1 02222221 2 348999999999999999999999 9988888888887544444344332
Q ss_pred EeecC--ceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecC
Q psy11701 412 QVIDA--KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485 (745)
Q Consensus 412 ~~~~~--~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~ 485 (745)
. .+. ..+.+.|. +++.... ....+.|..+...+...|+|.|.|.
T Consensus 305 ~-~g~p~p~~~i~W~--------------------~~~~~~~---------~~~~l~i~~v~~~d~G~Y~C~a~~~ 350 (363)
T 1wio_A 305 V-WGPTSPKLMLSLK--------------------LENKEAK---------VSKREKAVWVLNPEAGMWQCLLSDS 350 (363)
T ss_dssp E-ESSCCTTCCEEEE--------------------CSSSSCS---------EEESSSEEEESSCCSEEEEEEECSS
T ss_pred E-ccccCCCccEEEE--------------------eCCCcee---------eeeeeeeeeeccccceeEEEEEecC
Confidence 2 111 11223333 3222111 1234466788888899999999864
No 97
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=5.6e-27 Score=237.26 Aligned_cols=260 Identities=19% Similarity=0.287 Sum_probs=178.1
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEecc------CCCCCCcee---------ecCceEEEccCCCC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGL-PEPEIHWVHNGKPIS------QAPPNPRRK---------VGPNRITIENLRKS 190 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~------~~~~~~~~~---------~~~~~L~i~~v~~~ 190 (745)
.+...|....+.+|+++.|.|.+.+. |.+.++|+|++.... ......+.. .....|.|.+++.+
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 45666888899999999999999886 888999999875432 011112222 33457999999999
Q ss_pred CCEEEEEEEEeCCceEE-----EEEEEEEeecC--CeeeeCCCceEEecCceEEEEEEEeecCCC--eEEEeeCCEEccC
Q psy11701 191 DTGNYGCNATNSLGYVY-----KDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTG 261 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~~~-----~~~~l~v~~~~--p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~ 261 (745)
|+|.|+|.+.|..+... ..+.|.|...+ |.+. .+ ...+.+|+.++|.|.+.+.|.+ .+.|++++..+..
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 99999999999865411 23566665433 2333 33 4567889999999999988765 8999999998865
Q ss_pred ceEEEee---------cCcEEEcccCCCCCEEEEEEEEeCCce---EEEEEEE--EEeecceeecCCCcEEEecCCeEEE
Q psy11701 262 GRYTILE---------TGDLKITDVAFADSGEYTCFARNKLGT---AQGSGSL--TVKEHTHITDQPEDYEVEAGQSATF 327 (745)
Q Consensus 262 ~~~~~~~---------~~~l~i~~~~~~d~G~Y~C~~~n~~g~---~~~~~~l--~v~~~p~~~~~p~~~~~~~g~~~~l 327 (745)
....... ...|.|.....+|.|.|+|.|.|..+. ......+ .+..+|.+...+.. +..|+.+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l 240 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNV 240 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEE
Confidence 4432211 124677777777789999999998765 2333333 33455554443332 568999999
Q ss_pred EEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCC------eEEEEecCCCCCCEEEEEEEEeCCceE
Q psy11701 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND------YSLTVTKSSELDSGQYTCRAQTELDFI 390 (745)
Q Consensus 328 ~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~------~~l~i~~~~~~~~g~y~c~a~n~~g~~ 390 (745)
.|.+.+.+++.+.+.|++++..+............+ ..|.|..+...|.|.|+|.|.|..|..
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 999999765456899999998875322222222222 347788888899999999999999864
No 98
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=7.4e-27 Score=235.05 Aligned_cols=257 Identities=18% Similarity=0.317 Sum_probs=190.7
Q ss_pred ceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEE
Q psy11701 133 EFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVY 207 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~ 207 (745)
....+.+|+.+.|.|... +.|.+.++|+|+|..+.... +... ....|.|.+++.+|+|.|+|.+.|..|...
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~---~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~ 85 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSP---RLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS 85 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCT---TEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCC---CEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE
Confidence 345678999999999885 57889999999999987432 3222 225899999999999999999999887544
Q ss_pred EEEEEEEee-----------cCCeeeeCCC-ceEEecCceEEEEEEEe-ecCCCeEEEeeCCEEccC-ceEEEeecC---
Q psy11701 208 KDVYVNVLA-----------HAPEITEAPK-DEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKELTG-GRYTILETG--- 270 (745)
Q Consensus 208 ~~~~l~v~~-----------~~p~~~~~~~-~~~v~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~-~~~~~~~~~--- 270 (745)
++.+.|.. .+|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|++++..+.. .++.+..+.
T Consensus 86 -s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~ 164 (312)
T 2y23_A 86 -SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTG 164 (312)
T ss_dssp -EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTT
T ss_pred -EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCC
Confidence 45555532 0444444333 67788999999999998 789999999999998864 344443332
Q ss_pred --cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe---------------------ecceeecCCCcEEEecCCeEEE
Q psy11701 271 --DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK---------------------EHTHITDQPEDYEVEAGQSATF 327 (745)
Q Consensus 271 --~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~---------------------~~p~~~~~p~~~~~~~g~~~~l 327 (745)
.|.|.+++.+|+|.|+|.+.+..+..... +.+. .+|.+.. +....+..|+.+.|
T Consensus 165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~v~~G~~~~l 241 (312)
T 2y23_A 165 IIEMFMEKLQDEDEGTYTFQLQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLL 241 (312)
T ss_dssp EEEEEESCCCGGGCEEEEEEEESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE-EEEEEEETTTEEEE
T ss_pred EEEEEEccCCcccCEeEEEEEEeCCceEEEE--EEEcchhhhhhcccccccccchhhccCCceee-cceEEEeCCCEEEE
Confidence 39999999999999999998654443333 3331 1122221 11357789999999
Q ss_pred EEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398 (745)
Q Consensus 328 ~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v 398 (745)
.|.+.+.|.+ ..+.|++++..+......... .....|.|..+...|.|.|+|.|.|..|.....+.|.+
T Consensus 242 ~C~~~~~p~~-~~v~W~~~g~~~~~~~~~~~~-~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 242 KCKVANIKKE-THIVWYKDEREISVDEKHDFK-DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEEEESCCSS-CEEEEEETTEEEEEECCC-----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred EEEEcCCCCC-CEEEEeeCCEECCCCCcEEEE-CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 9999998763 389999999887643332222 33468999999999999999999999999988887765
No 99
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.95 E-value=1.7e-26 Score=234.53 Aligned_cols=270 Identities=16% Similarity=0.221 Sum_probs=198.0
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeec----CCCeEEEEeCC--Ee-------------ccCCCCCCceee-----cCceE
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGL----PEPEIHWVHNG--KP-------------ISQAPPNPRRKV-----GPNRI 182 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~----p~~~v~W~~~g--~~-------------~~~~~~~~~~~~-----~~~~L 182 (745)
.+...+....+.+|+++.|.|.+.+. +.+.+.|+|++ .. +. .....+... .+..|
T Consensus 16 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~L 94 (331)
T 3u83_A 16 QVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVL-APYRERVEFLRPSFTDGTI 94 (331)
T ss_dssp -----CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEEC-TTCTTTEEESSCSSSBCCE
T ss_pred ceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcC-cccCCceEecccCCCCceE
Confidence 34455777889999999999999875 44589999954 11 11 112223332 35689
Q ss_pred EEccCCCCCCEEEEEE-EEeCCceEEEEEEEEEeecCCeee--eCCCceEEecC---ceEEEEEE-EeecCCCeEEEeeC
Q psy11701 183 TIENLRKSDTGNYGCN-ATNSLGYVYKDVYVNVLAHAPEIT--EAPKDEYTVDG---KTVVLTCR-VFGAPKPEVNWIHN 255 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~-~~~~~g~~~~~~~l~v~~~~p~~~--~~~~~~~v~~g---~~~~l~C~-~~~~p~~~i~W~~~ 255 (745)
.|.+++.+|+|.|+|. +.+..+.....+.|.|.. +|.+. ..+....+.+| +.++|.|. +.+.|.+.+.|+++
T Consensus 95 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 95 RLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA-KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB-CCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEcccCcccCcEEEEEEEecCCCccEEEEEEEEec-CCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 9999999999999998 556677777788888886 55442 35566778888 78999998 88889999999995
Q ss_pred CEEccCceEEE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceeecC-CCcEEEecCCeEEEE
Q psy11701 256 QKELTGGRYTI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ-PEDYEVEAGQSATFR 328 (745)
Q Consensus 256 ~~~~~~~~~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~~~-p~~~~~~~g~~~~l~ 328 (745)
+.......... .....|.|.++..+|+|.|+|.|.|..+..+..+.|.|..+|.+... +....+..|+.+.|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~ 253 (331)
T 3u83_A 174 LKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLT 253 (331)
T ss_dssp SCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEE
T ss_pred CCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEE
Confidence 32211111111 11235888888999999999999999999888999999888876533 344557789999999
Q ss_pred EEEEecCCCCcE-EEEeeCCeeccCCCCCeEEEcCCeEEEEe-cCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCC
Q psy11701 329 CNAVSDPSLKLS-IVWLRGSEPIDFESEPRFVQSNDYSLTVT-KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405 (745)
Q Consensus 329 C~~~~~~~~~~~-i~W~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P 405 (745)
|.+.+.|. +. +.|++++..+.. . . ......|.|. .+...|.|.|+|.|.|..|.....+.|.|...+...
T Consensus 254 C~~~g~p~--p~~i~W~~~~~~~~~--~--~-~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 254 CKADANPP--ATEYHWTTLNGSLPK--G--V-EAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAALE 325 (331)
T ss_dssp EEEEEESC--CCEEEEEETTBSCCT--T--E-EEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC-----
T ss_pred EeCcCCCC--CCEEEEEECCCcccc--c--c-eecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchhh
Confidence 99999987 45 999999887652 2 1 1234689999 899999999999999999999888888887655443
No 100
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=238.67 Aligned_cols=272 Identities=16% Similarity=0.214 Sum_probs=203.4
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.+|.|...+....+.+|+++.|.|.+.+. +.|++++..... .......+.|.|.+++.+|+|.|+|.+.|..
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 74 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWT----LYSDGSSSILSTNNATFQNTGTYRCTEPGDP 74 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCE----ECCBTTEEEEEESSCCGGGCSCEEECCCC--
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceE----EeccCceEEEEEcccccccCEEEEEEEccCC
Confidence 47888888888899999999999999873 899976542110 0011123589999999999999999999988
Q ss_pred ceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCC--CeEEEeeC-CEEcc-CceEEEeecCcEEEcccCC
Q psy11701 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHN-QKELT-GGRYTILETGDLKITDVAF 279 (745)
Q Consensus 204 g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~--~~i~W~~~-~~~~~-~~~~~~~~~~~l~i~~~~~ 279 (745)
+.....+.|.|...+..+...+....+.+|+.++|.|.+.+ |. +.+.|+++ +..+. ..++.....+.|.|.++..
T Consensus 75 ~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 153 (292)
T 4dkd_C 75 LGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKF 153 (292)
T ss_dssp --CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCG
T ss_pred CCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCH
Confidence 87778888888864544566777888999999999999987 44 67999997 44443 3345555566799999999
Q ss_pred CCCEEEEEEEEeCCceE-EEEEEEEEee----cceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCC
Q psy11701 280 ADSGEYTCFARNKLGTA-QGSGSLTVKE----HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354 (745)
Q Consensus 280 ~d~G~Y~C~~~n~~g~~-~~~~~l~v~~----~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~ 354 (745)
.|+|.|+|.+.|..+.. +..+.|.|.. +|.+...+....+..|+.+.|.|.+.+.++ .+.+.|++++..+....
T Consensus 154 ~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~-~~~~~w~~~~~~~~~~~ 232 (292)
T 4dkd_C 154 IQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDV-NFDVFLQHNNTKLAIPQ 232 (292)
T ss_dssp GGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSS-CCEEECCBSSCCCCCCB
T ss_pred HHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCC-ceEEEEeCCCcccccCc
Confidence 99999999999887755 3478888886 777777777666679999999999998764 47899999887664322
Q ss_pred CCeEEE---cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCC
Q psy11701 355 EPRFVQ---SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405 (745)
Q Consensus 355 ~~~~~~---~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P 405 (745)
...+.. .....|.|..+...|.|.|+|.|.|..|.....+.|.|.....++
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 233 QSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp EEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred cceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 211111 123479999999999999999999999999999988887665443
No 101
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=3.3e-26 Score=223.81 Aligned_cols=236 Identities=15% Similarity=0.221 Sum_probs=184.4
Q ss_pred EeeCCCeEEEEEEEee-cCCC--eEEEEeCCEeccCCCCCCceeecCceEEEccC---CCCCCEE--EEEEEEeCCceEE
Q psy11701 136 NAAEEETVTFECKASG-LPEP--EIHWVHNGKPISQAPPNPRRKVGPNRITIENL---RKSDTGN--YGCNATNSLGYVY 207 (745)
Q Consensus 136 ~v~~G~~~~l~C~~~~-~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v---~~~d~G~--Y~C~~~~~~g~~~ 207 (745)
.+.+|+++.|.|.+.+ .|.+ .++|+|+|..+.. ........|.+..+ ...|+|. |+|.+.|..|...
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~-----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~ 88 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE 88 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC-----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc-----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcE
Confidence 6889999999999998 7776 9999999998863 33444556777666 7788885 9999999999988
Q ss_pred EEEEEEEeecCC-eeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCCCEEEE
Q psy11701 208 KDVYVNVLAHAP-EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYT 286 (745)
Q Consensus 208 ~~~~l~v~~~~p-~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 286 (745)
..+.|.|...++ .+. +....+.+|+.++|.|.+. |.+.+.| ++..+.... ..+.|.|..+..+|.|.|+
T Consensus 89 ~~~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~----~~~~l~i~~~~~~~~g~Y~ 158 (265)
T 2oz4_A 89 TLQTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG----PRAQLLLKATPEDNGRSFS 158 (265)
T ss_dssp EEEEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS----SEECCEEECCGGGTTEEEE
T ss_pred EEEEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC----CcEEEEEccccccCCceEE
Confidence 888999875443 333 4456688999999999997 8889999 776663211 2246889999999999999
Q ss_pred EEEEeCC-ceEE---EEEEEEEeecceeecC--CCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEE
Q psy11701 287 CFARNKL-GTAQ---GSGSLTVKEHTHITDQ--PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360 (745)
Q Consensus 287 C~~~n~~-g~~~---~~~~l~v~~~p~~~~~--p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~ 360 (745)
|.|.|.. |... ..+.|.|..+|.+... |....+..|+.+.|.|.+.+.|. +.+.|++++..+.
T Consensus 159 C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~--p~i~W~~~~~~~~--------- 227 (265)
T 2oz4_A 159 CSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPL--PELKCLKDGTFPL--------- 227 (265)
T ss_dssp EEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESC--CEEEEEETTTEEC---------
T ss_pred EEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCC--CeEEEEECCcccC---------
Confidence 9998544 6544 6788888888776443 55678899999999999999986 7899999986222
Q ss_pred cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEec
Q psy11701 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400 (745)
Q Consensus 361 ~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~ 400 (745)
..+.+ ..+...|.|.|+|.|.|..|.....+.|.|..
T Consensus 228 -~~g~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 228 -PIGES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp -CTTSC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred -CCCcE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 11112 23677999999999999999999999988864
No 102
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=1.3e-26 Score=232.63 Aligned_cols=266 Identities=20% Similarity=0.273 Sum_probs=193.6
Q ss_pred ceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEecc--------------CCCCCCceee-----cCceEEEccCCCCCC
Q psy11701 133 EFINAAEEETVTFECKASGL-PEPEIHWVHNGKPIS--------------QAPPNPRRKV-----GPNRITIENLRKSDT 192 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~--------------~~~~~~~~~~-----~~~~L~i~~v~~~d~ 192 (745)
...++.+|++++|.|.+.+. +.+.++|+|++.... ......+... .+.+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 35678899999999998654 445899998643221 0111122221 345799999999999
Q ss_pred EEEEEEEEeC-CceEEEEEEEEEeecCCe-eeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEccCceEEE---
Q psy11701 193 GNYGCNATNS-LGYVYKDVYVNVLAHAPE-ITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGRYTI--- 266 (745)
Q Consensus 193 G~Y~C~~~~~-~g~~~~~~~l~v~~~~p~-~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~--- 266 (745)
|.|+|.|.|. .|.....+.+.+...++. +...+.......|+.+.|.|.+ .+.|.+.+.|++++..+.......
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTS
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeee
Confidence 9999999986 455666667776653332 2344555556678999999985 678999999999987765332221
Q ss_pred --eecCcEEEcccCCCCCEEEEEEEEeCCce--EEEEEEEEEeecceeecCC-CcEEEecCCeEEEEEEEEecCCCCcEE
Q psy11701 267 --LETGDLKITDVAFADSGEYTCFARNKLGT--AQGSGSLTVKEHTHITDQP-EDYEVEAGQSATFRCNAVSDPSLKLSI 341 (745)
Q Consensus 267 --~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~~p~~~~~p-~~~~~~~g~~~~l~C~~~~~~~~~~~i 341 (745)
...+.|.|..+...|.|.|+|.|.|..+. ....+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+ ..+
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~~v 245 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPP-FKS 245 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCE-EEE
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCC-cEE
Confidence 11235999999999999999999998765 4556677777777765444 34456778999999999998862 379
Q ss_pred EEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCC
Q psy11701 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403 (745)
Q Consensus 342 ~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~ 403 (745)
.|++++..+... ........+.|..+...|.|.|+|.|.|..|..+..+.|.|..||.
T Consensus 246 ~W~k~~~~~~~~----~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 246 VWSRLDGQWPDG----LLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp ECCBSSSCCCSS----CBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEECCeECCCc----EEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999998776421 1223445567788999999999999999999999999999987764
No 103
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.94 E-value=1.4e-25 Score=225.58 Aligned_cols=276 Identities=12% Similarity=0.163 Sum_probs=199.7
Q ss_pred cCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEE
Q psy11701 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391 (745)
Q Consensus 312 ~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 391 (745)
.++..+.+..|++++|.|.+.+.+. .+.|.|++++..+.. ...+. ....+.|.|.++...|.|.|+|. ..|...
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~-~~~i~W~~~~~~~~~-~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~---~~g~~~ 84 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPED-NATVHWVLRKPAAGS-HPSRW-AGMGRRLLLRSVQLHDSGNYSCY---RAGRPA 84 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTC-CSEEEEEEECSSSSC-CCEEE-EEESSEEEECSCCGGGCEEEEEE---SSSSCS
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCC-CceEEEEECCccCCc-ccccc-ccccceEEecccchhhCeEeEEE---eCCEEe
Confidence 3344444579999999999887553 478999998765532 11222 23457899999999999999999 367777
Q ss_pred EEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCC-CCce-eEEE-EccCceeEEEec
Q psy11701 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG-EGSI-RELI-VNKGESTTTEVD 468 (745)
Q Consensus 392 ~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~-~~~~-~~~~-~~~~~~~~~~i~ 468 (745)
..+.|.|..||.+|. +.+.......++.+.|+++... +...+|.|.|+..... ...+ .... .......++.+.
T Consensus 85 ~~~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~---~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~ 160 (325)
T 1n26_A 85 GTVHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTP---SLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLA 160 (325)
T ss_dssp CEEEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCC---CTTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEEC
T ss_pred eeEEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCC---CCCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEEC
Confidence 889999999999997 7664213367899999985432 2347899988764221 1111 1221 113456788888
Q ss_pred ccc-cCcceeEEEEEecCCCCCCCCcceEEeC-CCCCCCCCCceeEEEcCC--ceEEEEeeCCCC--CCCceeeEEEEEE
Q psy11701 469 KFV-PASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPGTVQSLEAIPLGS--SAFYLKWVKPEQ--PNGVLMGYKIKYQ 542 (745)
Q Consensus 469 ~L~-~~~~Y~~~V~a~n~~G~g~~S~~~~~~t-~~~~P~~p~~~~~~~~~~--~~i~l~W~~p~~--~~g~i~~Y~v~~~ 542 (745)
.+. +.+.|.|+|.|.|..|.+. +....+.+ ....|++|.++.+...+. +++.|+|++|.. .++.+++|.|+|+
T Consensus 161 ~~~~~~~~Y~f~v~A~N~~G~~~-s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr 239 (325)
T 1n26_A 161 VPEGDSSFYIVSMCVASSVGSKF-SKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYR 239 (325)
T ss_dssp CCTTCCCEEEEEEEEEETTEEEE-CCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEE
T ss_pred CCcccCcEEEEEEEEEcCCCCcc-cCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEE
Confidence 876 7899999999999999874 33344443 345688999999888753 689999999975 5678999999999
Q ss_pred EcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCC
Q psy11701 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN 604 (745)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~ 604 (745)
..+...|.... + .....++.|.+|.|++.|+|+|+|.|..|.|.+|+++..+...+
T Consensus 240 ~~~~~~W~~~~-----~-~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 240 AERSKTFTTWM-----V-KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp ETTCSCCEEEE-----C-GGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred eCCCCCCEEEc-----c-cCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 87654443221 1 23457899999999999999999999999999998876554443
No 104
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.6e-26 Score=228.02 Aligned_cols=266 Identities=16% Similarity=0.218 Sum_probs=178.5
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
|.+........+.+|+++.|.|.+.+. ++|++++..+.............+.|.|.+++.+|+|.|+|.|.|..|.
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 344445666788999999999999874 9999999887311000000001358999999999999999999998876
Q ss_pred ---EEEEEEEEEeecCCeeeeCCCc---eEEecCceEEEEEEEeecCCCeEEEeeCC--EEccCceEEEeecCcEEEccc
Q psy11701 206 ---VYKDVYVNVLAHAPEITEAPKD---EYTVDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDV 277 (745)
Q Consensus 206 ---~~~~~~l~v~~~~p~~~~~~~~---~~v~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~~~~~~~~~~~~l~i~~~ 277 (745)
....+.|.|......+...... ..+.+|+.+.|.|.+. .|.+.+.|++.+ ..+.. .+ . ....+.
T Consensus 77 ~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~-~~-~-~~~~~~---- 148 (289)
T 3mjg_X 77 ETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV-PY-D-HQRGFS---- 148 (289)
T ss_dssp --CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC-CE-E-TTTEEE----
T ss_pred CcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce-ee-c-CCcCee----
Confidence 2334444444211111111112 5688999999999998 677788888864 22221 11 0 111121
Q ss_pred CCCCCEEEEEEEEeCCceEE-EEEEEEEee--cceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCC
Q psy11701 278 AFADSGEYTCFARNKLGTAQ-GSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354 (745)
Q Consensus 278 ~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~--~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~ 354 (745)
...|+|.|+|.|.|..+... ....+.|.. +|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++.......
T Consensus 149 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~--p~v~W~~~~~~~~~~~ 226 (289)
T 3mjg_X 149 GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEV--VNFEWTYPRKESGRLV 226 (289)
T ss_dssp ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSS--BEEEEECTTSSSSCCC
T ss_pred eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCC--cceEEEcCCccCCCcc
Confidence 35799999999998776643 345666654 555555555567889999999999999775 7899998765443212
Q ss_pred CCeEEEc------CCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCC
Q psy11701 355 EPRFVQS------NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405 (745)
Q Consensus 355 ~~~~~~~------~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P 405 (745)
....... ....|.|..+...|.|.|+|.|.|..|....++.|.+...+...
T Consensus 227 ~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 227 EPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp CCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred cccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 2222221 23689999999999999999999999999999999998776544
No 105
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=2.8e-27 Score=250.49 Aligned_cols=267 Identities=18% Similarity=0.281 Sum_probs=180.9
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEee-cCCC-eeEEEECCEecCCCCCe--E--eccC-----CcEEEEccCCCCCCE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGG-TPLP-QTIWSKDGVPINPSDRI--S--QGNY-----GKSLIIKHVEFSDQG 100 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~-~v~W~~~~~~i~~~~~~--~--~~~~-----~~~L~i~~~~~~d~G 100 (745)
+|.+. +.+....+.+|+.++|.|.+.| .|.+ +|+|+|||.+|...... . .... .+.|.|.+++.+|+|
T Consensus 116 ~P~v~-~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 194 (438)
T 1qgc_4 116 APTVS-IFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 194 (438)
T ss_dssp CCEEE-EECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CCEEE-ecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCC
Confidence 34443 3333333457889999999977 6777 99999999998754111 1 1111 237999999999999
Q ss_pred EEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEeccC--------
Q psy11701 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKPISQ-------- 168 (745)
Q Consensus 101 ~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~~~~-------- 168 (745)
.|+|.|.+..+... ....+.+..++.....|....+.+|+++.|.|.+.|.| .+.+.|+|+ |+.+..
T Consensus 195 ~Y~C~a~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~ 273 (438)
T 1qgc_4 195 SYTCEATHKTSTSP-IVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGG 273 (438)
T ss_dssp EEEEEEEETTCSSC-EEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTS
T ss_pred eEEEEEEecccCCc-eecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecC
Confidence 99999999877642 22222222233344456677899999999999999987 679999996 443320
Q ss_pred ------CCCCCceeec------CceEEEccCCCCCCEEEEEEEEeCCc-----eEEEEEEEEEee---cCCeeeeCCCce
Q psy11701 169 ------APPNPRRKVG------PNRITIENLRKSDTGNYGCNATNSLG-----YVYKDVYVNVLA---HAPEITEAPKDE 228 (745)
Q Consensus 169 ------~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~~~~g-----~~~~~~~l~v~~---~~p~~~~~~~~~ 228 (745)
.....++... ...|.|.+++.+|+|.|+|.|.|..+ .......+.|.. .+|.+...+...
T Consensus 274 ~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~ 353 (438)
T 1qgc_4 274 TYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGS 353 (438)
T ss_dssp CCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCG
T ss_pred CceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCccc
Confidence 0011222221 24899999999999999999998443 112234566653 345554444344
Q ss_pred EEecCceEEEEEEEeec-CCC-eEEEeeCCEEccCc---eEEE----eecCcEEEcccCCCCCEEEEEEEEeCCceEEEE
Q psy11701 229 YTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKELTGG---RYTI----LETGDLKITDVAFADSGEYTCFARNKLGTAQGS 299 (745)
Q Consensus 229 ~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~---~~~~----~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 299 (745)
.+.+|+.++|.|.+.+. |.+ .+.|++++..+... .... .....|.|.++..+| |.|+|.|.|..|.....
T Consensus 354 ~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~ 432 (438)
T 1qgc_4 354 AAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 432 (438)
T ss_dssp GGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEE
T ss_pred ccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCccee
Confidence 56689999999999987 777 99999998765321 1110 111258898888888 99999999999876554
Q ss_pred EE
Q psy11701 300 GS 301 (745)
Q Consensus 300 ~~ 301 (745)
..
T Consensus 433 ~~ 434 (438)
T 1qgc_4 433 KK 434 (438)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 106
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.94 E-value=5.6e-27 Score=236.50 Aligned_cols=265 Identities=17% Similarity=0.280 Sum_probs=176.0
Q ss_pred CCCCCeeEeeccceeEecC-CcEEEEEEEeec-C-CCeeEEEECCEecCCCCCe--EeccCC-----cEEEEccCCCCCC
Q psy11701 30 RHAPKQQYVTRKKEVALRN-KKVELFCIFGGT-P-LPQTIWSKDGVPINPSDRI--SQGNYG-----KSLIIKHVEFSDQ 99 (745)
Q Consensus 30 ~~~p~~~~~~~~~~~v~~G-~~~~l~C~~~g~-p-~~~v~W~~~~~~i~~~~~~--~~~~~~-----~~L~i~~~~~~d~ 99 (745)
..+|..++..+....+..| ++++|.|.+.|. | .++|+|+|||..|...... .....+ +.|.|..+..+|.
T Consensus 5 ~~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 84 (323)
T 2wqr_A 5 FTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSD 84 (323)
T ss_dssp CCCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTT
T ss_pred CCCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCC
Confidence 3466666665554444332 699999999886 4 4699999999998754321 111122 2578888888899
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEE---EecCeE-EecCceeEeeCCCeEEEEEEEeec-CCC---eEEEEeCC-EeccCCC
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSV---LAAPYF-TVEPEFINAAEEETVTFECKASGL-PEP---EIHWVHNG-KPISQAP 170 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V---~~~p~~-~~~~~~~~v~~G~~~~l~C~~~~~-p~~---~v~W~~~g-~~~~~~~ 170 (745)
|.|+|.|.+..+... ..+.+.+ ...|.+ ...|....+.+|+++.|.|.+.+. |.+ .+.|+|++ ..+....
T Consensus 85 g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~ 163 (323)
T 2wqr_A 85 RTYTCQVTYQGHTFE-DSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST 163 (323)
T ss_dssp CCEEEEEEETTEEEE-EEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC
T ss_pred CcEEEEEEeCCCCcc-eeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc
Confidence 999999999876543 3232211 123433 444555568899999999999885 555 99999975 4443211
Q ss_pred C-----CCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE---eecCCeeeeCCCceEEecCceEEEEEEE
Q psy11701 171 P-----NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITEAPKDEYTVDGKTVVLTCRV 242 (745)
Q Consensus 171 ~-----~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v---~~~~p~~~~~~~~~~v~~g~~~~l~C~~ 242 (745)
. ........+.|.|.++..+|+|.|+|.|.|..+.......+.+ ...+|.+...+.......|+.++|.|.+
T Consensus 164 ~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~ 243 (323)
T 2wqr_A 164 RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 243 (323)
T ss_dssp CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEE
T ss_pred CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEe
Confidence 0 0001112347999999999999999999998643322223321 1246665543322222239999999999
Q ss_pred eec-CCC-eEEEeeCCEEccCceEEE-----ee------cCcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 243 FGA-PKP-EVNWIHNQKELTGGRYTI-----LE------TGDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 243 ~~~-p~~-~i~W~~~~~~~~~~~~~~-----~~------~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.+. |.+ .+.|++++..+....+.. .. .+.|.|..+..+|.|.|+|.|.|....
T Consensus 244 ~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 244 QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 884 433 799999999886543321 11 235899999999999999999998765
No 107
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.94 E-value=1.9e-25 Score=232.59 Aligned_cols=357 Identities=13% Similarity=0.118 Sum_probs=164.0
Q ss_pred CCeEEEEEEEEecC--CCCcEEEEeeCCeeccCCCCCeEEE-cCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 322 GQSATFRCNAVSDP--SLKLSIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398 (745)
Q Consensus 322 g~~~~l~C~~~~~~--~~~~~i~W~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v 398 (745)
...+.|+|...... ...+.++|...+..-.......... .....+....+.....+.+++.|.| .+.+.......+
T Consensus 20 ~~~~~L~W~p~~~~~~~i~Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~ 98 (414)
T 3se4_A 20 DDNFILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSF 98 (414)
T ss_dssp TTEEEEC----------CEEEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEEEE-TTEEEEEECCCB
T ss_pred CCceEEEEcCCCCCCCCeEEEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEEee-CCcCCCEecCce
Confidence 45677888765432 1225666665331111000000001 1223444445677888999999999 554333222111
Q ss_pred ----eccCCCCCCceeEEeecCceeEEEEEeCCCCC-----cceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecc
Q psy11701 399 ----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS-----LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469 (745)
Q Consensus 399 ----~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~-----~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 469 (745)
..+.++|. +.+.. ..+++.|+|. +.... .++.+.+|+|.||..+.... .. + ......+.|.+
T Consensus 99 ~~~~~~~~~pP~-v~~~~--~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~--~~--~-~~~~~~~~i~~ 169 (414)
T 3se4_A 99 TPFRKAQIGPPE-VHLEA--EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVE--ER--I-ENIYSRHKIYK 169 (414)
T ss_dssp CHHHHCCCCCCE-EEEEE--CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCE--EE--E-EEECSEEEECC
T ss_pred eecccceeCCCe-EEEEE--cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCce--EE--E-ecCCcEEEEcC
Confidence 13445664 66554 4568999999 43222 14678899999998765432 22 2 33567899999
Q ss_pred cccCcceeEEEEEecC--CCCCCCCcceEEeCCCCCC-CCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEc--
Q psy11701 470 FVPASKNFARVLAFNG--AYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV-- 544 (745)
Q Consensus 470 L~~~~~Y~~~V~a~n~--~G~g~~S~~~~~~t~~~~P-~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~-- 544 (745)
|.|++.|.|+|+|+|. .|.|++|....+.|.+++| .+|.++.+...+ +++.|.|++|.. +.+|.|+|+..
T Consensus 170 L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~~----~~~Y~v~y~~~~~ 244 (414)
T 3se4_A 170 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTYA----NMTFQVQWLHAFL 244 (414)
T ss_dssp CCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSSS----SCEEEEEEEESGG
T ss_pred CCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECCCCC----CeEEEEEEEehhc
Confidence 9999999999999994 7888889888888877655 578899887765 679999999742 35999999973
Q ss_pred ------CCcccCCcccccccccCCCcceeeec-CCCCCccEEEEEEEEecCCCCCCcceeeecccCC----CCCCCCCCC
Q psy11701 545 ------KGTKVGPLLERLPYISDPTTTSAKLA-GLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN----PDNVEGRGS 613 (745)
Q Consensus 545 ------~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~----~~~~~~~~~ 613 (745)
+...|..... ..+.....+.+. +|.+++.|.|+|.|+|..|.|++|....+.+... ++.+.+.+
T Consensus 245 ~~~~~~~~~~w~~~~~----~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~l~~~~- 319 (414)
T 3se4_A 245 KRNPGNHLYKWKQIPD----CENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRS- 319 (414)
T ss_dssp GSCCCC--CCCCBCST----TTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC-------------
T ss_pred cccccccccCceECCC----ccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCCeEEEEE-
Confidence 1122221110 112234666776 6999999999999999999999986554432211 11122222
Q ss_pred CCcceeEEEeecCccc----cCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCC
Q psy11701 614 TPNNLVISWTAMPEIE----HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEG 689 (745)
Q Consensus 614 ~p~~~~v~W~~~~~~~----~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~ 689 (745)
..++|.|+|.+|.... .+|.+..|.|.|...+... .
T Consensus 320 ~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~----------------------------------------~ 359 (414)
T 3se4_A 320 LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNA----------------------------------------E 359 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCc----------------------------------------e
Confidence 2467888888766543 1345677777665321110 0
Q ss_pred CeEEEEEecCCCcEEEecccccCCcceeEEEEec----CcccCCCCcceEEeCCCCCc
Q psy11701 690 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGGT 743 (745)
Q Consensus 690 ~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~----~~G~g~~s~~~~~~t~~~~~ 743 (745)
.. + ....+.+.|.+|+|++.|.|+|+|.+ .+|.|++|+++.++|..|.+
T Consensus 360 --~~--~-~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~~~ 412 (414)
T 3se4_A 360 --RK--I-IEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGNT 412 (414)
T ss_dssp ----------------------------------------------------------
T ss_pred --EE--E-EecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCCCc
Confidence 00 0 12456788999999999999999999 36999999999999977653
No 108
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.94 E-value=3.8e-26 Score=229.79 Aligned_cols=261 Identities=14% Similarity=0.199 Sum_probs=175.9
Q ss_pred EEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEE
Q psy11701 116 YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNY 195 (745)
Q Consensus 116 ~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 195 (745)
..+...+..+|.|...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+... .........|.|.+++.+|+|.|
T Consensus 15 ~~~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~---~~~~~~~~~L~I~~v~~~D~G~Y 89 (316)
T 3vh8_G 15 KGSHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI---FHGRIFQESFNMSPVTTAHAGNY 89 (316)
T ss_dssp ---------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH---HHHCCBSSCEEECSCCGGGCEEE
T ss_pred cccccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee---ecCCcceEEEEECCCCcccCeEE
Confidence 335566778999998888 578899999999999886 6799999999875421 11223467899999999999999
Q ss_pred EEEEEeCCc-----eEEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEE--
Q psy11701 196 GCNATNSLG-----YVYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI-- 266 (745)
Q Consensus 196 ~C~~~~~~g-----~~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~-- 266 (745)
+|.+.+..+ .....+.|.|.. .+|.+...+... +.+|++++|.|.+. .+.+.+.|++++..+.......
T Consensus 90 ~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~ 167 (316)
T 3vh8_G 90 TCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQI 167 (316)
T ss_dssp EEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEE
T ss_pred EEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeee
Confidence 999986422 233345666653 245666555554 88999999999994 4566899999987764322111
Q ss_pred ---eecCcEEEcccCCCCCEEEEEEEEeCCce-----EEEEEEEEEee---cceeecCCCcEEEecCCeEEEEEEEEecC
Q psy11701 267 ---LETGDLKITDVAFADSGEYTCFARNKLGT-----AQGSGSLTVKE---HTHITDQPEDYEVEAGQSATFRCNAVSDP 335 (745)
Q Consensus 267 ---~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~-----~~~~~~l~v~~---~p~~~~~p~~~~~~~g~~~~l~C~~~~~~ 335 (745)
...+.|.|.+++.+|+|.|+|.|.|..|. .+....|.|.. +|.+...+.. .+..|+.++|.|.+.. +
T Consensus 168 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~v~L~C~~~~-~ 245 (316)
T 3vh8_G 168 HDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGP-KVQAGESVTLSCSSRS-S 245 (316)
T ss_dssp ETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCS-CCCTTSCCEEEEEESS-C
T ss_pred cCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCC-eecCCCcEEEEEECCC-C
Confidence 13457999999999999999999998763 14455666653 3444333332 4578999999999973 3
Q ss_pred CCCcEEEEeeCCeeccCCCCCeEEEc--CCeEEEEecCCCCCCEEEEEEEEeCCce
Q psy11701 336 SLKLSIVWLRGSEPIDFESEPRFVQS--NDYSLTVTKSSELDSGQYTCRAQTELDF 389 (745)
Q Consensus 336 ~~~~~i~W~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 389 (745)
. ..+.|++++..+........... ....|.|..+. |.|.|+|.+.|..+.
T Consensus 246 ~--~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 246 Y--DMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp C--SEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred C--cEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 3 78999999876542110000001 12578888888 999999999997663
No 109
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.94 E-value=2.6e-26 Score=233.76 Aligned_cols=257 Identities=16% Similarity=0.214 Sum_probs=174.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEec-----------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPI-----------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i-----------------~~~~~~~~~~----~~~~L~ 90 (745)
.+..|....+.+|++++|.|.+.+.+ .+.+.|+|+ +..+ ....|+.+.. ...+|.
T Consensus 3 ~l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (344)
T 1za6_B 3 QLVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVE 82 (344)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred eeeCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEE
Confidence 45567778899999999999998763 678999996 3322 1134665532 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCE
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGK 164 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~ 164 (745)
|.+++.+|+|.|+|.+.+..+.. ...+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |. +.+.|+++|.
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~ 161 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMAYW-GQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 161 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTCEE-CCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTB
T ss_pred ECCCCcccCEEEEEEEecCccee-cCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCc
Confidence 99999999999999998754322 234577776 35555554444457899999999999986 65 6999999997
Q ss_pred eccCCCCC-----CceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE-----------------------Eee
Q psy11701 165 PISQAPPN-----PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN-----------------------VLA 216 (745)
Q Consensus 165 ~~~~~~~~-----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~-----------------------v~~ 216 (745)
.+...... .......+.|.|.++..+| |.|+|.|.|..+.......+. ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 240 (344)
T 1za6_B 162 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQP 240 (344)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CC
T ss_pred cCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCC
Confidence 64211000 0111112479999998888 999999999887643332221 122
Q ss_pred cCCeeeeCCCceEEecCceEEEEEEEeec-C-CCeEEEeeCCEEccCce---EEEeecC------cEEEcccCCCCCEEE
Q psy11701 217 HAPEITEAPKDEYTVDGKTVVLTCRVFGA-P-KPEVNWIHNQKELTGGR---YTILETG------DLKITDVAFADSGEY 285 (745)
Q Consensus 217 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~---~~~~~~~------~l~i~~~~~~d~G~Y 285 (745)
.+|.+...+.......|..++|.|.+.+. | .+.+.|++++..+.... .....++ .|.|.....+|.|.|
T Consensus 241 ~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~Y 320 (344)
T 1za6_B 241 REPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVF 320 (344)
T ss_dssp BCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEE
T ss_pred cCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeE
Confidence 45665544333223346679999999985 4 35899999998765321 1112233 356666666789999
Q ss_pred EEEEEeCCc
Q psy11701 286 TCFARNKLG 294 (745)
Q Consensus 286 ~C~~~n~~g 294 (745)
+|.|.|...
T Consensus 321 tC~a~~~~l 329 (344)
T 1za6_B 321 SCSVMHEAL 329 (344)
T ss_dssp EEEEECTTS
T ss_pred EEEEEcCCC
Confidence 999998754
No 110
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.93 E-value=1.7e-24 Score=203.75 Aligned_cols=183 Identities=28% Similarity=0.480 Sum_probs=156.6
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecC-CCCCeEec--cCC-cEEEEccCCC-CCCEEEEEEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQG--NYG-KSLIIKHVEF-SDQGSYTCEV 106 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~-~~~~~~~~--~~~-~~L~i~~~~~-~d~G~Y~C~~ 106 (745)
.|+.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+. ...++... ..+ ..|.|.+++. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 46677788999999999999999999999999999999999997 34555442 222 5899999999 9999999999
Q ss_pred EeCCeeeEEEEEEEEEEec-------CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecC
Q psy11701 107 SNGVGEAKSYSIDLSVLAA-------PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179 (745)
Q Consensus 107 ~~~~g~~~~~~~~l~V~~~-------p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 179 (745)
.+..|...+..+.|.|... |.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .+....+
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~ 162 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSN--PRYSLKD 162 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTS--TTEEEET
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCC--CeEEccC
Confidence 9988886667889999876 788888888889999999999999999999999999999887432 3445567
Q ss_pred ceEEEccCCCCCCEEEEEEEEeCCceEEEE-EEEEEee
Q psy11701 180 NRITIENLRKSDTGNYGCNATNSLGYVYKD-VYVNVLA 216 (745)
Q Consensus 180 ~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~-~~l~v~~ 216 (745)
+.|.|.++..+|+|.|+|.|.|..|..... +.|.|..
T Consensus 163 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 163 GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 799999999999999999999999988765 7888764
No 111
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.93 E-value=6.5e-25 Score=209.57 Aligned_cols=186 Identities=24% Similarity=0.414 Sum_probs=155.8
Q ss_pred ccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEE
Q psy11701 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~ 479 (745)
.|+.+|.++.+.. .+.+++.|+|+++ ++.+.+|.|+|+........... + ......++|.+|.+++.|.|+
T Consensus 4 ~p~~~P~~l~~~~-~~~~si~l~W~~p-----~g~i~~Y~v~~~~~~~~~~~~~~--~-~~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 4 MDLGAPQNPNAKA-AGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHL--L-DSKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp -CCCCCEEEEEEE-CSSSCEEEEEECC-----SSCCCEEEEEEEETTSCGGGCEE--E-EESSSEEEECSCCTTCEEEEE
T ss_pred CCCCCCcceEEEE-cCCCEEEEEEECC-----CCccceEEEEEEECCCCccceEE--E-cCCccEEEECCCCCCCEEEEE
Confidence 5789999999988 8899999999985 46789999999877654333322 2 346778999999999999999
Q ss_pred EEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccC--Ccccccc
Q psy11701 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG--PLLERLP 557 (745)
Q Consensus 480 V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~~ 557 (745)
|.|.|..|.|++|..+.++|.+.+|.+|.++++...+.++|.|+|++|.+.+|.|.+|.|+|+..+..... .+.. .
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~ 152 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKK--V 152 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEE--C
T ss_pred EEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceE--E
Confidence 99999999999999999999999999999999999999999999999988889999999999987654321 1211 1
Q ss_pred cccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcce
Q psy11701 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596 (745)
Q Consensus 558 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~ 596 (745)
.......+++.|.+|.|++.|.|+|.|.|..|.|++|..
T Consensus 153 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 191 (234)
T 3f7q_A 153 LVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREA 191 (234)
T ss_dssp CCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred EecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCc
Confidence 122455679999999999999999999999999999874
No 112
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.93 E-value=1.3e-24 Score=201.67 Aligned_cols=180 Identities=24% Similarity=0.371 Sum_probs=150.3
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCC--C--eEeccCCcEEEEccCCCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD--R--ISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~--~--~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
|+.+...+....+.+|++++|.|.+.|.|.+.+.|+|++..+.... + +........|.|.+++.+|+|.|+|.+.+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATN 84 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 4556678889999999999999999999999999999999887653 3 33344456899999999999999999999
Q ss_pred CCeeeEEEEEEEEEE---ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecC--ceEE
Q psy11701 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP--NRIT 183 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~---~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~--~~L~ 183 (745)
..|... ..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+...... ...... ..|.
T Consensus 85 ~~~~~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~L~ 162 (194)
T 2a38_A 85 GSGQAT-STAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDF-QISQEGDLYSLL 162 (194)
T ss_dssp TTEEEE-EEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSE-EEEEETTEEEEE
T ss_pred CCceEe-EEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcE-EEEEcCCEEEEE
Confidence 887765 56778887 6777888888889999999999999999999999999999988743221 111112 2799
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 163 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 163 IAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 9999999999999999999999888888776
No 113
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.93 E-value=1.2e-24 Score=201.16 Aligned_cols=182 Identities=19% Similarity=0.314 Sum_probs=152.4
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecC-CCeeEEEE-CCEecCC-CCCeEec---cCCcEEEEccCCCCCCEEEEEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTP-LPQTIWSK-DGVPINP-SDRISQG---NYGKSLIIKHVEFSDQGSYTCEV 106 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p-~~~v~W~~-~~~~i~~-~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~ 106 (745)
|..+...|.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+.. ..++... .....|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 66778899999999999999999998876 78999999 8888874 4555542 34568999999999999999999
Q ss_pred EeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEcc
Q psy11701 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186 (745)
Q Consensus 107 ~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~ 186 (745)
.+..+...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+............++.|.|.+
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG 161 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETT
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECC
Confidence 99886566688999999999999999999999999999999999999999999999999875433333344567899999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 187 LRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
+..+|+|.|+|.|.|..+.......+.|
T Consensus 162 ~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 162 IKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 9999999999999998865555444443
No 114
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.93 E-value=6.8e-25 Score=205.02 Aligned_cols=195 Identities=25% Similarity=0.397 Sum_probs=148.2
Q ss_pred CCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCC-cccCCcccccccccCCCcceeeecCCCCCccEE
Q psy11701 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG-TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579 (745)
Q Consensus 501 ~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 579 (745)
.++|++|.++++.. +.+++.|+|++|.+.+++|.+|.|+|+.... ..|.... ..+ ......+.+ +|.|++.|+
T Consensus 3 ~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~---~~~-~~~~~~~~~-~L~p~t~Y~ 76 (205)
T 1cfb_A 3 QDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY---EKV-PNTDSSFVV-QMSPWANYT 76 (205)
T ss_dssp CCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE---EEE-ETTCSEEEE-ECCSSEEEE
T ss_pred ccCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee---ecc-CCCceEEEE-eCCCCCEEE
Confidence 57899999999999 9999999999998888899999999987543 2221111 112 345567777 999999999
Q ss_pred EEEEEEecCCCCCCc-ceeeecccC-C----CCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCcc
Q psy11701 580 IHLAGYTKAGDGAES-KYLFYVPFK-N----PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653 (745)
Q Consensus 580 ~~V~a~n~~G~g~~S-~~~~~~~~~-~----~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~ 653 (745)
|+|.|.|..|.|.+| ......+.. . +.++.+....+++|.|+|+++.....||.|.+|.|.|+..+....+
T Consensus 77 ~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~--- 153 (205)
T 1cfb_A 77 FRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAW--- 153 (205)
T ss_dssp EEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCC---
T ss_pred EEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCc---
Confidence 999999999999998 333333222 1 2233334456789999999988778899999999999876332211
Q ss_pred CccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCC-CCc
Q psy11701 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSE 732 (745)
Q Consensus 654 ~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~-~s~ 732 (745)
....+.....+++.|.+|.|++.|.|+|+|.|.+|.|+ .|+
T Consensus 154 --------------------------------------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~ 195 (205)
T 1cfb_A 154 --------------------------------------ENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAE 195 (205)
T ss_dssp --------------------------------------EEEEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCC
T ss_pred --------------------------------------EEEEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCC
Confidence 11111133678899999999999999999999999999 479
Q ss_pred ceEEeCCCCC
Q psy11701 733 IISFVTPEGG 742 (745)
Q Consensus 733 ~~~~~t~~~~ 742 (745)
++.++|.|++
T Consensus 196 ~v~~~T~e~v 205 (205)
T 1cfb_A 196 EVVGYSGEDR 205 (205)
T ss_dssp CEEEESSSCC
T ss_pred cEEEecCCCC
Confidence 9999998864
No 115
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.93 E-value=8.6e-25 Score=201.79 Aligned_cols=180 Identities=20% Similarity=0.310 Sum_probs=150.3
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEE-CCEecCCCCCeEeccCC--cEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYG--KSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~i~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
..+...+.+..+.+|++++|.|.+.|.|. .+.|+| ++..+....++.+...+ .+|.|.+++.+|+|.|+|.+.+..
T Consensus 3 l~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 3 LQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EEEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred eEEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 45677888999999999999999998887 999999 88888877777654433 589999999999999999999988
Q ss_pred eeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCC
Q psy11701 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~ 190 (745)
|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+............++.|.|.++..+
T Consensus 82 g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 161 (189)
T 2v44_A 82 GQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKS 161 (189)
T ss_dssp SCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGG
T ss_pred CCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcc
Confidence 87767889999999999988888888999999999999999999999999999887643333233445679999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 191 DTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
|+|.|+|.|.|..+.......+.|
T Consensus 162 d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 162 DEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cCeEEEEEEEccccCceeeeeEEE
Confidence 999999999999876655444433
No 116
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.93 E-value=1.5e-24 Score=201.23 Aligned_cols=176 Identities=24% Similarity=0.424 Sum_probs=151.5
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEe-ecCCCeeEEEECCEecCCCC--CeEe--ccC-------CcEEEEccCCCCCCE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFG-GTPLPQTIWSKDGVPINPSD--RISQ--GNY-------GKSLIIKHVEFSDQG 100 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~i~~~~--~~~~--~~~-------~~~L~i~~~~~~d~G 100 (745)
|..|+..|++..+.+|++++|.|.+. |.|.+.+.|+|+|..|.... ++.+ ... .++|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 55677899999999999999999998 99999999999999998652 3332 222 358999999999999
Q ss_pred EEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCC-eEEEEeCCEeccCCCCCCceeecC
Q psy11701 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP-EIHWVHNGKPISQAPPNPRRKVGP 179 (745)
Q Consensus 101 ~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~v~W~~~g~~~~~~~~~~~~~~~~ 179 (745)
.|+|.+.+..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+...... ...
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~----~~~ 157 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH----GPQ 157 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----SCC
T ss_pred EEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----CCC
Confidence 9999999988877666689999999999999998999999999999999999999 99999999988754322 456
Q ss_pred ceEEEccCCCCCCEEEEEEEEeCCceEE-EEEEEEE
Q psy11701 180 NRITIENLRKSDTGNYGCNATNSLGYVY-KDVYVNV 214 (745)
Q Consensus 180 ~~L~i~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v 214 (745)
+.|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 158 ~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 158 RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 789999987 79999999999999886 5778877
No 117
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=7.2e-25 Score=202.96 Aligned_cols=182 Identities=27% Similarity=0.452 Sum_probs=156.0
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC-CCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
|+.+...+....+.+|++++|.|.+.|.|.+.+.|+|++..+.. ..++.+...+..|.|.+++.+|+|.|+|.+.+..|
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 86 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVG 86 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSS
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCC
Confidence 34566777888999999999999999999999999999999875 46677777777899999999999999999999888
Q ss_pred eeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCC
Q psy11701 112 EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191 (745)
Q Consensus 112 ~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d 191 (745)
...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......++.|.|.++..+|
T Consensus 87 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~d 164 (192)
T 2iep_A 87 GAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENS--RIAVLESGSLRIHNVQKED 164 (192)
T ss_dssp CCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCS--SEEECTTSCEEESSCCGGG
T ss_pred ceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCC--cEEEecCCcEEEecCChhh
Confidence 76667788999999999988888899999999999999999999999999999887432 1223356689999999999
Q ss_pred CEEEEEEEEeCCceEEE-EEEEEEee
Q psy11701 192 TGNYGCNATNSLGYVYK-DVYVNVLA 216 (745)
Q Consensus 192 ~G~Y~C~~~~~~g~~~~-~~~l~v~~ 216 (745)
+|.|+|.|.|..|.... .+.|.|..
T Consensus 165 ~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 165 AGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 99999999999988743 46777653
No 118
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=3.6e-24 Score=197.68 Aligned_cols=178 Identities=25% Similarity=0.365 Sum_probs=146.3
Q ss_pred CCCCeeEeeccceeEec-CCcEEEEEEEeecCC--CeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEE
Q psy11701 31 HAPKQQYVTRKKEVALR-NKKVELFCIFGGTPL--PQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~-G~~~~l~C~~~g~p~--~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 107 (745)
.+|.+. . +....+.+ |++++|.|.+.+.|. +.+.|+|++..+....... .+..|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~P~i~-~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 2 NEPRIV-T-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA---SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp -CCEEE-E-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC---SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCccc-c-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe---ccEEEEEecCCcccCEEEEEEEE
Confidence 345443 3 55666777 999999999998887 7999999999987543332 45689999999999999999999
Q ss_pred eCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe--CCEeccCCCCCCceeec----Cce
Q psy11701 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH--NGKPISQAPPNPRRKVG----PNR 181 (745)
Q Consensus 108 ~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~--~g~~~~~~~~~~~~~~~----~~~ 181 (745)
+. +.. +..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+.......++... .+.
T Consensus 77 n~-~~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 154 (190)
T 2wv3_A 77 FV-SAP-KANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTE 154 (190)
T ss_dssp ET-TEE-EEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEE
T ss_pred eC-Ccc-cccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeE
Confidence 98 544 47789999999999988988899999999999999999999999999 88877644333343332 237
Q ss_pred EEEccCC-CCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 182 ITIENLR-KSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 182 L~i~~v~-~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
|.|.++. .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 155 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 155 LNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 799999999999999998888888774
No 119
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=4e-24 Score=201.11 Aligned_cols=182 Identities=30% Similarity=0.488 Sum_probs=147.1
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEe--c-cCCcEEEEccC-CCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--G-NYGKSLIIKHV-EFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~--~-~~~~~L~i~~~-~~~d~G~Y~C~~~~ 108 (745)
|+.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+........ . ..+..|.|.++ +.+|+|.|+|.+.+
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n 85 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASN 85 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEE
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEc
Confidence 55566788899999999999999999999999999999999975433222 1 23457999999 59999999999999
Q ss_pred CCeeeEEEEEEEEEEec-------CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee----
Q psy11701 109 GVGEAKSYSIDLSVLAA-------PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV---- 177 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~-------p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~---- 177 (745)
..|... ..+.|.|... |.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.......+...
T Consensus 86 ~~g~~~-~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~ 164 (212)
T 2yd6_A 86 NVGEIS-VSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSE 164 (212)
T ss_dssp TTEEEE-EEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEET
T ss_pred CCCcEE-EEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecC
Confidence 988754 6788888764 6777788888899999999999999999999999999999876533333322
Q ss_pred cCceEEEccCCCCCCEEEEEEEEeCCceEEEE-EEEEEe
Q psy11701 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKD-VYVNVL 215 (745)
Q Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~-~~l~v~ 215 (745)
..+.|.|.++..+|+|.|+|.|.|..|..... +.|.+.
T Consensus 165 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 165 SIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 23789999999999999999999999987654 666665
No 120
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.93 E-value=1.3e-24 Score=204.23 Aligned_cols=195 Identities=16% Similarity=0.206 Sum_probs=158.8
Q ss_pred ccCCCCCCceeEEeecCceeEEEEEeCCC--CCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCccee
Q psy11701 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSP--QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~~~~~v~l~W~~~~~--~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~ 477 (745)
.|+.+|.++.+.. .+.+++.|+|+++.. ...++.+.+|.|+|+........... . ......++|.+|.|++.|.
T Consensus 3 ~P~~~P~~l~~~~-~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~-~~~~~~~~i~~L~p~t~Y~ 78 (211)
T 3p4l_A 3 LPMMPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN--A-NATTLSYLVTGLKPNTLYE 78 (211)
T ss_dssp CCCCCCEEEEEEE-CSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE--E-EESSSEEEECSCCTTCEEE
T ss_pred CCCCCCCCEEEEe-cCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE--e-CCCceEEEecCcCCCCEEE
Confidence 5788999999987 889999999998542 33467899999999876554333332 2 4467789999999999999
Q ss_pred EEEEEecCCCCCCCCcceEEeCCCCCCC-CCCceeEEEc--CCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccc
Q psy11701 478 ARVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIPL--GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554 (745)
Q Consensus 478 ~~V~a~n~~G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~--~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~ 554 (745)
|+|.|.|..|.|++|..+.++|.+..|. +|.++++... +.++|.|+|++|.+.+|.|.+|.|+|+..+......+..
T Consensus 79 ~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~ 158 (211)
T 3p4l_A 79 FSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVI 158 (211)
T ss_dssp EEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEE
T ss_pred EEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEE
Confidence 9999999999999999999999998887 8889998887 478999999999888899999999999765543332221
Q ss_pred ccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 555 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
. ...+..+++.|.+|.|++.|.|+|.|.|..|.|++|+.+.+..
T Consensus 159 ~---~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~ 202 (211)
T 3p4l_A 159 E---PVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 202 (211)
T ss_dssp E---EEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred E---EecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccC
Confidence 1 1145678999999999999999999999999999998876553
No 121
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.93 E-value=1.2e-24 Score=199.37 Aligned_cols=174 Identities=26% Similarity=0.429 Sum_probs=145.6
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccC----CcEEEEccCCCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
++.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+....+...... ...|.|.+++.+|+|.|+|.+.+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 44567788899999999999999999999999999999999987655443322 25899999999999999999998
Q ss_pred CCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCC-eEEEEeCCEeccCCCCCCceeecCceEEEccC
Q psy11701 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP-EIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v 187 (745)
..+...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+.... .....|.|.++
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~------~~~~~L~i~~~ 155 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA------PSPSVLNVTGV 155 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE------ESSEEEEECCC
T ss_pred CCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC------CCceEEEEecc
Confidence 87766667789999999999999999999999999999999999999 999999999886321 25678999988
Q ss_pred CCCCCEEEEEEEEeCCceEEE-EEEEEE
Q psy11701 188 RKSDTGNYGCNATNSLGYVYK-DVYVNV 214 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~~~-~~~l~v 214 (745)
+|+|.|+|.|.|..|.... .+.|.|
T Consensus 156 --~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 156 --TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp --SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --ccCeEEEEEEECCCCCcccceEEEEe
Confidence 5899999999999998754 566655
No 122
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.92 E-value=7.8e-24 Score=196.83 Aligned_cols=182 Identities=21% Similarity=0.272 Sum_probs=149.0
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCC-CCeEecc-CC--cEEEEccCCCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGN-YG--KSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~-~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
|+.+...+.+..+.+|++++|.|.+.|.|.+.+.|+|++..+... .++.... .+ ..|.|.+++.+|+|.|+|.+.+
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 83 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATN 83 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEE
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEE
Confidence 556678889999999999999999999999999999999998754 3444432 22 3899999999999999999999
Q ss_pred CCeeeEEEEEEEEEEecCeEEec-----CceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee-ecCceE
Q psy11701 109 GVGEAKSYSIDLSVLAAPYFTVE-----PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK-VGPNRI 182 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~~~~~-----~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~L 182 (745)
..|... ..+.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......... ...+.|
T Consensus 84 ~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L 162 (197)
T 2j8h_A 84 QGGSVS-GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (197)
T ss_dssp TTEEEE-EEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEE
T ss_pred CCCcee-EEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEE
Confidence 887754 7788888887765432 355678899999999999999999999999999887433221111 134689
Q ss_pred EEcc-CCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 183 TIEN-LRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 183 ~i~~-v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
.|.+ +..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999 99999999999999999998888888875
No 123
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=8e-25 Score=231.55 Aligned_cols=272 Identities=18% Similarity=0.287 Sum_probs=178.7
Q ss_pred eceEEEEEEecccCCcccCCCCCeeEeeccceeEecCCcEEEEEEEeec-CCC-eeEEEECCEecCC--CCCeEec---c
Q psy11701 12 GNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT-PLP-QTIWSKDGVPINP--SDRISQG---N 84 (745)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~v~W~~~~~~i~~--~~~~~~~---~ 84 (745)
+....|.|... ...+|.++...+.. .+.+|+.++|.|.+.|. |.+ .|.|+|++..+.. ....... .
T Consensus 109 ~~~~~l~V~~~------~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~ 181 (444)
T 1igt_B 109 GQGTTVTVSSA------KTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT 181 (444)
T ss_dssp BCCEEEEECSC------CCBCCEEEEECCCS-SCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEE
T ss_pred cCcEEEEecCC------CCCCCceeEecccc-cCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEE
Confidence 34456666521 12345555444443 45899999999999885 776 9999999876421 1111110 0
Q ss_pred CCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEE------------------EecCeEEec-CceeE-eeCCCeEE
Q psy11701 85 YGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV------------------LAAPYFTVE-PEFIN-AAEEETVT 144 (745)
Q Consensus 85 ~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V------------------~~~p~~~~~-~~~~~-v~~G~~~~ 144 (745)
..+.|.|.+++.+| |.|+|.|.+..+... ....+.+ ..+|.+... |.... +.+|++++
T Consensus 182 ~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~ 259 (444)
T 1igt_B 182 LSSSVTVTSSTWPS-QSITCNVAHPASSTK-VDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPI 259 (444)
T ss_dssp EEEEEEECSTTTTT-SCCEEEEEETTTTEE-EEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCE
T ss_pred EEEEEEEchhhcCC-CeEEEEEEeCCCCcc-eEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcE
Confidence 12469999999999 999999999877643 2223322 125555333 33333 58999999
Q ss_pred EEEEEeecC----CCeEEEEeCCEeccCCCCCCcee------ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 145 FECKASGLP----EPEIHWVHNGKPISQAPPNPRRK------VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 145 l~C~~~~~p----~~~v~W~~~g~~~~~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
|.|.+.|.+ .+.++|+|+|..+.......... ...+.|.|.++..+|+|.|+|.|.|..+.......+.+
T Consensus 260 L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~ 339 (444)
T 1igt_B 260 VTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISK 339 (444)
T ss_dssp EEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred EEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEec
Confidence 999999873 36999999998876433221111 12357999999999999999999998876532333321
Q ss_pred ---eecCCeeeeCCCce-EEecCceEEEEEEEeec-CCC-eEEEeeCCEEccCceE---EEeecC------cEEEcccCC
Q psy11701 215 ---LAHAPEITEAPKDE-YTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKELTGGRY---TILETG------DLKITDVAF 279 (745)
Q Consensus 215 ---~~~~p~~~~~~~~~-~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~~~---~~~~~~------~l~i~~~~~ 279 (745)
...+|.+...+... .+..| .++|.|.+.+. |.+ .+.|++++..+..... ....++ .|.|.....
T Consensus 340 ~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~ 418 (444)
T 1igt_B 340 PKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNW 418 (444)
T ss_dssp CCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHH
T ss_pred cCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHh
Confidence 22467665444332 33344 59999999984 555 8999999988743211 112333 355666666
Q ss_pred CCCEEEEEEEEeCC
Q psy11701 280 ADSGEYTCFARNKL 293 (745)
Q Consensus 280 ~d~G~Y~C~~~n~~ 293 (745)
+|.|.|+|.|.|..
T Consensus 419 ~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 419 VERNSYSCSVVHEG 432 (444)
T ss_dssp HTCCCEEEEEECTT
T ss_pred cCCCeEEEEEECCC
Confidence 77999999999875
No 124
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.92 E-value=1.8e-23 Score=193.56 Aligned_cols=181 Identities=26% Similarity=0.496 Sum_probs=149.1
Q ss_pred CCCeeEe-eccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 32 APKQQYV-TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 32 ~p~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
+|.+... .+.+..+.+|++++|.|.+.|.|.+.+.|+|++..+....++.+...+.+|.|.+++.+|+|.|+|.+.+..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 3444332 344778999999999999999999999999999999988888877777899999999999999999999988
Q ss_pred eeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEeccCCCC--CCceee----cCceE
Q psy11701 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPISQAPP--NPRRKV----GPNRI 182 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~~~~~--~~~~~~----~~~~L 182 (745)
+... ..+.|.|..+|.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|+++ +..+..... ..+... ..+.|
T Consensus 82 ~~~~-~~~~l~V~~~p~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 159 (192)
T 2va4_A 82 GEDE-KQAFLQVFVQPHIIQLKN-ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSL 159 (192)
T ss_dssp EEEE-EEEEEEEEEEEEEEEECC-EEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEE
T ss_pred cccc-eEEEEEEEccCcccccCc-ceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEE
Confidence 7766 678899988888766544 4677899999999999999999999998 666543221 112221 23689
Q ss_pred EEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 160 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 160 HIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 99999999999999999999999888888776
No 125
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.92 E-value=1.9e-23 Score=194.35 Aligned_cols=183 Identities=23% Similarity=0.363 Sum_probs=151.0
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCc--EEEEccCCCCCCEEEEEEEEeC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK--SLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
.|+.+...+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+....++.....+. +|.|.+++.+|+|.|+|.+.+.
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 85 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNE 85 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECS
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECC
Confidence 34556788889999999999999999999999999999999998777776654443 8999999999999999999988
Q ss_pred CeeeEEEEEEEEEEecCeEEec---CceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeec--CceEEE
Q psy11701 110 VGEAKSYSIDLSVLAAPYFTVE---PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG--PNRITI 184 (745)
Q Consensus 110 ~g~~~~~~~~l~V~~~p~~~~~---~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~--~~~L~i 184 (745)
.|... ..+.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ..... ...|.|
T Consensus 86 ~~~~~-~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~-~~~~~~~~~~L~i 163 (197)
T 3lcy_A 86 VGEVE-TSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENI-TIENTEHYTHLVM 163 (197)
T ss_dssp SCEEE-EEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSE-EEEECSSEEEEEE
T ss_pred CCcee-EEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCce-EEEEcCCEEEEEE
Confidence 77655 6678888887766533 35567889999999999999999999999999998743221 11111 268999
Q ss_pred ccCCC-CCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 185 ENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 185 ~~v~~-~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
.++.. +|+|.|+|.|.|..|.....+.|.|..
T Consensus 164 ~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 164 KNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 99995 899999999999999998888888763
No 126
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.92 E-value=6.5e-24 Score=199.00 Aligned_cols=193 Identities=14% Similarity=0.195 Sum_probs=153.4
Q ss_pred EEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcce-eeeeEEEEEEeccCCCCceeEEEEc---cCceeEEEecccc
Q psy11701 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG-HFRGYKVQTWTEKDGEGSIRELIVN---KGESTTTEVDKFV 471 (745)
Q Consensus 396 l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~-~i~~y~i~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~ 471 (745)
+....+|.+|.++.+.. .+. ++.|+|+++. ..+| ++.+|.|+|+...... +...... ......+++.+|.
T Consensus 3 l~~~~~P~~P~~~~~~~-~~~-s~~l~W~~p~--~~~g~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~L~ 76 (209)
T 2vkw_A 3 LAQADTPSSPSIDQVEP-YSS-TAQVQFDEPE--ATGGVPILKYKAEWRAVGEEV--WHSKWYDAKEASMEGIVTIVGLK 76 (209)
T ss_dssp --CCCCCCCCEEEEEEE-CSS-CEEEEEECCS--CCCSSCCCEEEEEEEESSCCC--CEEEEEEHHHHHHHSEEEECCCC
T ss_pred ccccCCCcCCcccEeee-ccC-eEEEEEcCCC--cCCCcceeEEEEEEeeCCCCC--ceEeEeeccCCCccceEEeCCCC
Confidence 45567889999999876 555 6899999852 2344 4999999998765433 3223220 1235689999999
Q ss_pred cCcceeEEEEEecCCCCCCCCcceEEeCCCC-CCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccC
Q psy11701 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEG-VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG 550 (745)
Q Consensus 472 ~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~-~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~ 550 (745)
|++.|.|+|.|.|..|.|.+|..+.++|... +|++|.++.+...+.++|.|+|++|.+.+++|.+|.|+|+. ....+.
T Consensus 77 p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~ 155 (209)
T 2vkw_A 77 PETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWK 155 (209)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCC
T ss_pred CCCeEEEEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCc
Confidence 9999999999999999999999888888776 89999999988899999999999997788999999999998 333333
Q ss_pred CcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
.... + .....++.|.+|.|++.|.|+|.|.|..|.|++|......
T Consensus 156 ~~~~----~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~ 200 (209)
T 2vkw_A 156 PEIR----L-PSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 200 (209)
T ss_dssp CCEE----E-CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred eeee----c-CCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhh
Confidence 2221 2 4566899999999999999999999999999998776544
No 127
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.9e-23 Score=191.57 Aligned_cols=181 Identities=28% Similarity=0.429 Sum_probs=144.8
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC--CCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP--SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
|+.+...+....+.+|++++|.|.+.+.|.+.+.|++++..+.. ..++.... +++|.|.+++.+|+|.|+|.+.+..
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT-TSCEEETTCCGGGCEEEEEEEEETT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec-CCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 45567888889999999999999999999999999999988763 45555544 4479999999999999999999876
Q ss_pred -eeeEEEEEEEEEEecCeEEecCc--eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccC
Q psy11701 111 -GEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187 (745)
Q Consensus 111 -g~~~~~~~~l~V~~~p~~~~~~~--~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v 187 (745)
+......+.|.|..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|+++|..+..... .......+.|.|.++
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~-~~~~~~~~~L~i~~~ 159 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEK-YILKGSNTELTVRNI 159 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSS-EEEETTTTEEEECSC
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCc-EEEecCCCEEEEcCC
Confidence 44445667888888888776654 45678999999999999999999999999998874321 112234578999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 188 RKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 160 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 160 INSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999999998888888775
No 128
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.92 E-value=1.3e-23 Score=196.37 Aligned_cols=192 Identities=19% Similarity=0.181 Sum_probs=151.4
Q ss_pred EeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccC-CCCceeEEEEccCceeEEEecccccCcce
Q psy11701 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD-GEGSIRELIVNKGESTTTEVDKFVPASKN 476 (745)
Q Consensus 398 v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y 476 (745)
|+.+|.+|.++.+.. +.+++.|+|+++ .+.++.+.+|.|+|+.... +.+......+ ......+.+ +|.|++.|
T Consensus 2 v~~~P~~P~~~~~~~--~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~-~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 2 VQDVPNAPKLTGITC--QADKAEIHWEQQ--GDNRSPILHYTIQFNTSFTPASWDAAYEKV-PNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCCCCCCEEEEEEE--CSSEEEEEEECC--CCTTSCCCEEEEEEEESSSTTCCEEEEEEE-ETTCSEEEE-ECCSSEEE
T ss_pred cccCCCCCCCcEEEe--cCCEEEEEEECc--ccCCCceEEEEEEEecCCCCCCceeeeecc-CCCceEEEE-eCCCCCEE
Confidence 456889999999876 889999999985 3556889999999976543 2221122233 345567777 99999999
Q ss_pred eEEEEEecCCCCCCCC-cceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCCC--CCCCceeeEEEEEEEcCCcccCCc
Q psy11701 477 FARVLAFNGAYNGPPS-EIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMGYKIKYQSVKGTKVGPL 552 (745)
Q Consensus 477 ~~~V~a~n~~G~g~~S-~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~ 552 (745)
.|+|.|.|..|.|.+| ....++|.+.+|. +|.++++...+.++|.|+|++|. +.+|.|.+|.|+|+..+... .+
T Consensus 76 ~~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~--~~ 153 (205)
T 1cfb_A 76 TFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAA--AW 153 (205)
T ss_dssp EEEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTC--CC
T ss_pred EEEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCC--Cc
Confidence 9999999999999998 5678888887774 78899999999999999999998 68899999999999876542 12
Q ss_pred ccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCC-cceeee
Q psy11701 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE-SKYLFY 599 (745)
Q Consensus 553 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~-S~~~~~ 599 (745)
.... +......++.|.+|.|++.|.|+|.|+|..|.|++ |..+..
T Consensus 154 ~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~ 199 (205)
T 1cfb_A 154 ENNN--IFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVG 199 (205)
T ss_dssp EEEE--ECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEE
T ss_pred EEEE--ecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEE
Confidence 1111 22446789999999999999999999999999995 555433
No 129
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.91 E-value=9.1e-24 Score=196.36 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=134.8
Q ss_pred eeccceeEecCCcEEEEEEEe-ecCCCeeEEEECCEecCCCCCeEeccC----CcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 38 VTRKKEVALRNKKVELFCIFG-GTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~i~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
..+.+..+.+|+.+.|.|.+. +.|.|+|+|+|||++|..+.++.+... ..+|.|.+++.+|+|.|+|.|.|..
T Consensus 7 ~~~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~-- 84 (207)
T 3rbs_A 7 KSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGK-- 84 (207)
T ss_dssp CEEEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETT--
T ss_pred ecCCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCC--
Confidence 445578999999999999995 479999999999999987766544322 2379999999999999999999933
Q ss_pred eEEEEEEEEEE---------------------ecCeEEecCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEeccCCC
Q psy11701 113 AKSYSIDLSVL---------------------AAPYFTVEPEFINAAEEETVTFECKASGL-PEPEIHWVHNGKPISQAP 170 (745)
Q Consensus 113 ~~~~~~~l~V~---------------------~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~~~~ 170 (745)
.. ....+.+. .+|.|...+ ...+.+|+++.|.|.+.|. |.+.++|+|||..+....
T Consensus 85 a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~ 162 (207)
T 3rbs_A 85 AT-NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE 162 (207)
T ss_dssp EE-EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC
T ss_pred eE-EEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC
Confidence 33 22232211 257776555 4778999999999999998 899999999999997533
Q ss_pred CCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
.. ....+...|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 163 ~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 163 KH-DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CC-CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ce-EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 21 11223347999999999999999999999999988887764
No 130
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.91 E-value=8.2e-24 Score=198.66 Aligned_cols=192 Identities=18% Similarity=0.218 Sum_probs=143.2
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCC----CCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCcc
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQP----NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
.+|.+|.++++...+.+++.|+|++|... ++.+.+|.|+|+..+...+.... . .....++.|.+|.|++.
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~-~~~~~~~~i~~L~p~t~ 76 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----A-NATTLSYLVTGLKPNTL 76 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-----E-EESSSEEEECSCCTTCE
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-----e-CCCceEEEecCcCCCCE
Confidence 45678999999999999999999998633 67899999999986654322211 1 45668999999999999
Q ss_pred EEEEEEEEecCCCCCCcceeeecccCCCCC-----CCCCCC--CCcceeEEEeecCccccCCCcceEEEEEeccCCCCCC
Q psy11701 578 YRIHLAGYTKAGDGAESKYLFYVPFKNPDN-----VEGRGS--TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~-----~~~~~~--~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~ 650 (745)
|.|+|.|.|..|.|++|..+...+....+. +.+... .++++.|+|+++. ..+|.|.+|.|.|+........
T Consensus 77 Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~ 154 (211)
T 3p4l_A 77 YEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPS--EANGKITGYIIYYSTDVNAEIH 154 (211)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCT--TCCSCCCEEEEEEESCTTSCGG
T ss_pred EEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCC--CCCCCEEEEEEEEEECCCCCCC
Confidence 999999999999999987765554332221 111112 3678999999764 4778999999999855222100
Q ss_pred CccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCC
Q psy11701 651 NQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730 (745)
Q Consensus 651 ~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~ 730 (745)
. .......++.+++.|.+|.|++.|.|+|+|.|.+|.|++
T Consensus 155 ----------------------~------------------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 194 (211)
T 3p4l_A 155 ----------------------D------------------WVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPM 194 (211)
T ss_dssp ----------------------G------------------SEEEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCC
T ss_pred ----------------------c------------------eEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCC
Confidence 0 011122567889999999999999999999999999999
Q ss_pred CcceEEeCCCC
Q psy11701 731 SEIISFVTPEG 741 (745)
Q Consensus 731 s~~~~~~t~~~ 741 (745)
|+++.|+|.+.
T Consensus 195 S~~v~~~~~~~ 205 (211)
T 3p4l_A 195 SEAVQFRTPKA 205 (211)
T ss_dssp CCCEEEECC--
T ss_pred CCCEEccCccc
Confidence 99999999764
No 131
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.91 E-value=2.6e-23 Score=221.64 Aligned_cols=274 Identities=18% Similarity=0.284 Sum_probs=179.3
Q ss_pred eceEEEEEEecccCCcccCCCCCeeEeeccceeEecCCcEEEEEEEeec-CC-C-eeEEEECCEecCCCC-CeEe-ccC-
Q psy11701 12 GNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT-PL-P-QTIWSKDGVPINPSD-RISQ-GNY- 85 (745)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~-~v~W~~~~~~i~~~~-~~~~-~~~- 85 (745)
+....|.|... ...+|.++...+.. +.+|+.++|.|.+.|. |. + .|.|++++..+.... .... ...
T Consensus 113 ~~~~~l~V~~~------~~~~P~i~~~~~~~--~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g 184 (475)
T 1iga_A 113 GQGTLVTVSSA------SPTSPKVFPLSLCS--TQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGD 184 (475)
T ss_pred cCceEEEeccC------CCcCCeEEecCccc--cCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCC
Confidence 44566777621 12345555443333 3799999999999887 65 5 999999885432110 0001 011
Q ss_pred ----CcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEE------------------ecCeE-EecCceeEeeCCCe
Q psy11701 86 ----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL------------------AAPYF-TVEPEFINAAEEET 142 (745)
Q Consensus 86 ----~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~------------------~~p~~-~~~~~~~~v~~G~~ 142 (745)
.+.|.|..+..+|.|.|+|.|.+..+...+..+.|.|. .+|.+ ...|....+.+|++
T Consensus 185 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~ 264 (475)
T 1iga_A 185 LYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSE 264 (475)
T ss_pred cEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCc
Confidence 13588999999999999999999876444444444331 24444 33344444689999
Q ss_pred EEEEEEEeecCC---CeEEEEeCCEeccCCCCCCce------eecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy11701 143 VTFECKASGLPE---PEIHWVHNGKPISQAPPNPRR------KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213 (745)
Q Consensus 143 ~~l~C~~~~~p~---~~v~W~~~g~~~~~~~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~ 213 (745)
+.|.|.+.|.++ +.+.| ++..+......... ....+.|.|.++..+|+|.|+|.|.|..+.......|.
T Consensus 265 v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~ 342 (475)
T 1iga_A 265 ANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLS 342 (475)
T ss_pred eEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEee
Confidence 999999998644 59999 44433321111111 11345799999999999999999999988754444443
Q ss_pred E--eecCCeeeeCCCc-eEEecCceEEEEEEEeec-C-CCeEEEeeCCEEccCceEE-----Ee---ecC------cEEE
Q psy11701 214 V--LAHAPEITEAPKD-EYTVDGKTVVLTCRVFGA-P-KPEVNWIHNQKELTGGRYT-----IL---ETG------DLKI 274 (745)
Q Consensus 214 v--~~~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~~~-----~~---~~~------~l~i 274 (745)
+ ...+|.+...+.. ..+..|+.++|.|.+.+. | .+.|.|+++|..+....+. .. .++ .|.|
T Consensus 343 ~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i 422 (475)
T 1iga_A 343 KSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRV 422 (475)
T ss_pred cCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEE
Confidence 2 2346666544433 346789999999999986 3 3489999999887654211 11 222 4677
Q ss_pred cccCCCCCEEEEEEEEeCCce
Q psy11701 275 TDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 275 ~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.....+|.|.|+|.|.|....
T Consensus 423 ~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 423 AAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred ChHHhcCCCEEEEEEEcCCCC
Confidence 777778899999999987543
No 132
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=7.4e-23 Score=189.70 Aligned_cols=182 Identities=30% Similarity=0.469 Sum_probs=152.7
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCC-Cceee--cCceEEEccCCCCCCEEEEEEEE
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKV--GPNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~-~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
.+|.|...+....+.+|+++.|.|.+.+.|.+.+.|+++|..+...... ..... ....|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 4678888888999999999999999999999999999999988754321 12222 23589999999999999999999
Q ss_pred eCCceEEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEEeecC---cEEE
Q psy11701 201 NSLGYVYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTILETG---DLKI 274 (745)
Q Consensus 201 ~~~g~~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~~---~l~i 274 (745)
|..|.....+.|.|.. .+|.+...+....+..|+.++|.|.+.+.|.+.+.|++++..+.. .++....++ .|.|
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLI 163 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEE
Confidence 9999888877787763 467778888888899999999999999999999999999998853 344444444 6999
Q ss_pred cccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 275 ~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
.++...|.|.|+|.|.|..|.....+.|.|+
T Consensus 164 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 164 AEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999999999999999998888888763
No 133
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=3.3e-23 Score=191.75 Aligned_cols=185 Identities=35% Similarity=0.563 Sum_probs=152.5
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+...............|.|.+++.+|+|.|+|.+.|.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 84 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNG 84 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECS
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcC
Confidence 45677777888889999999999999999999999999999988743322223334457999999999999999999998
Q ss_pred Cce-EEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEEeecCcEEEcccCCC
Q psy11701 203 LGY-VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTILETGDLKITDVAFA 280 (745)
Q Consensus 203 ~g~-~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~~~l~i~~~~~~ 280 (745)
.|. ....+.+.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .++.....+.|.|.++..+
T Consensus 85 ~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 163 (192)
T 2iep_A 85 VGGAVESCGALQVKM-KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKE 163 (192)
T ss_dssp SSCCEEEEEEEEEEE-EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGG
T ss_pred CCceeEeEEEEEEEe-CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChh
Confidence 877 44556677764 77788888888899999999999999999999999999988753 4566667779999999999
Q ss_pred CCEEEEEEEEeCCceE-EEEEEEEEeecc
Q psy11701 281 DSGEYTCFARNKLGTA-QGSGSLTVKEHT 308 (745)
Q Consensus 281 d~G~Y~C~~~n~~g~~-~~~~~l~v~~~p 308 (745)
|+|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 164 d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 164 DAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred hCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 9999999999999887 456778877653
No 134
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.91 E-value=1.4e-22 Score=190.63 Aligned_cols=184 Identities=32% Similarity=0.540 Sum_probs=152.7
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee-ecC--ceEEEccCCC-CCCEEEEEEE
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK-VGP--NRITIENLRK-SDTGNYGCNA 199 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~-~~~--~~L~i~~v~~-~d~G~Y~C~~ 199 (745)
.+|.|...|....+.+|+++.|.|.+.+.|.+.+.|+++|..+.......... ..+ ..|.|.++.. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 47889999999999999999999999999999999999999986322221111 122 5899999999 9999999999
Q ss_pred EeCCce-EEEEEEEEEeecC------CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC--ceEEEeecC
Q psy11701 200 TNSLGY-VYKDVYVNVLAHA------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG--GRYTILETG 270 (745)
Q Consensus 200 ~~~~g~-~~~~~~l~v~~~~------p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~--~~~~~~~~~ 270 (745)
.|..|. ....+.|.|...+ |.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .++ ...++
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~-~~~~~ 163 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY-SLKDG 163 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTE-EEETT
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeE-EccCC
Confidence 999888 6777888887532 7788888888899999999999999999999999999998753 333 34567
Q ss_pred cEEEcccCCCCCEEEEEEEEeCCceEEEE-EEEEEeecc
Q psy11701 271 DLKITDVAFADSGEYTCFARNKLGTAQGS-GSLTVKEHT 308 (745)
Q Consensus 271 ~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v~~~p 308 (745)
.|.|.++..+|+|.|+|.|.|..|..... +.|.|....
T Consensus 164 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 164 FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 99999999999999999999999988654 788887653
No 135
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=4e-23 Score=195.32 Aligned_cols=185 Identities=29% Similarity=0.486 Sum_probs=147.9
Q ss_pred CCCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCC----CeEeccCCcE---EEEccCCCCCCEEE
Q psy11701 30 RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKS---LIIKHVEFSDQGSY 102 (745)
Q Consensus 30 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~----~~~~~~~~~~---L~i~~~~~~d~G~Y 102 (745)
+..|+.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|+|..+.... ++... .+.. |.|.+++.+|+|.|
T Consensus 6 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFK-DGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECT-TSCEEESSCCBSSSCBCCEEE
T ss_pred ccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEec-CCceEEEEEeccCCcccCceE
Confidence 3456667788999999999999999999999999999999999987642 22222 2222 36889999999999
Q ss_pred EEEEEeCCeeeEEEEEEEEEEe-cCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCC-----CCc-
Q psy11701 103 TCEVSNGVGEAKSYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPP-----NPR- 174 (745)
Q Consensus 103 ~C~~~~~~g~~~~~~~~l~V~~-~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~-----~~~- 174 (745)
+|.+.+..|...+..+.|.|.. +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..... ..+
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 164 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSE
T ss_pred EEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcE
Confidence 9999998887765566777765 5667777888889999999999999 8899999999999998874321 112
Q ss_pred eeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 175 ~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
.....+.|.|.+++.+|+|.|+|.|.|..|....+..+.+.
T Consensus 165 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 165 RIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 22356789999999999999999999999988776555544
No 136
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.91 E-value=4.8e-23 Score=194.06 Aligned_cols=191 Identities=27% Similarity=0.443 Sum_probs=147.6
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCC-----eEeccCCc----EEEEccCCCCCCEEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR-----ISQGNYGK----SLIIKHVEFSDQGSY 102 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~-----~~~~~~~~----~L~i~~~~~~d~G~Y 102 (745)
.|+.+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+..... ......+. .|.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 356667888999999999999999999999999999999999875321 12222222 244567799999999
Q ss_pred EEEEEeCCeeeEEEEEEEEEEe-cCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCCCceeecCc
Q psy11701 103 TCEVSNGVGEAKSYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180 (745)
Q Consensus 103 ~C~~~~~~g~~~~~~~~l~V~~-~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 180 (745)
+|.+.+..|...+..+.|.|.. ++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.... .+....++
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~--~~~~~~~~ 165 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD--ERITIRGG 165 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS--TTEEEETT
T ss_pred EEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc--ceEEccCC
Confidence 9999998887765667777765 4556667778889999999999999 889999999999999987432 34455678
Q ss_pred eEEEccCCCCCCEEEEEEEEeCCceEEEE-EEEEEeecCCeeeeCC
Q psy11701 181 RITIENLRKSDTGNYGCNATNSLGYVYKD-VYVNVLAHAPEITEAP 225 (745)
Q Consensus 181 ~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~-~~l~v~~~~p~~~~~~ 225 (745)
.|.|.++..+|+|.|+|.|.|..|..... +.|.|.. +|.+...|
T Consensus 166 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~-~P~~~~~P 210 (212)
T 2v9r_A 166 KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE-RPSFVKAA 210 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---------
T ss_pred eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe-CchHhhhc
Confidence 99999999999999999999999986654 7888874 66665544
No 137
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.91 E-value=1.7e-24 Score=229.86 Aligned_cols=272 Identities=14% Similarity=0.238 Sum_probs=171.5
Q ss_pred ceEEEEEEecccCCcccCCCCCeeEeeccceeEecCCcEEEEEEEeec-CC-CeeEEEECCEecCCCCC-eEeccCC---
Q psy11701 13 NRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT-PL-PQTIWSKDGVPINPSDR-ISQGNYG--- 86 (745)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~~v~W~~~~~~i~~~~~-~~~~~~~--- 86 (745)
....|.|.... ..+|.++. .+....+.+|++++|.|.+.|. |. +.|.|+|++..+..... ......+
T Consensus 119 ~~~~l~V~~~~------~~~P~i~~-~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 191 (457)
T 1hzh_H 119 KGTTVIVSSAS------TKGPSVFP-LAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS 191 (457)
T ss_dssp CCEEEEECSCC------CBCCEEEE-ECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEE
T ss_pred CcEEEEecCCC------CCCCeEEe-cCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEE
Confidence 45567766311 23454443 3434457899999999999887 65 79999999976531100 0111111
Q ss_pred --cEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEE-----------------ecCeE-EecCceeE-eeCCCeEEE
Q psy11701 87 --KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL-----------------AAPYF-TVEPEFIN-AAEEETVTF 145 (745)
Q Consensus 87 --~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~-----------------~~p~~-~~~~~~~~-v~~G~~~~l 145 (745)
..|.|.+++.+| |.|+|.|.+..+... ....+.+. .+|.+ ...|.... +.+|+++.|
T Consensus 192 ~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L 269 (457)
T 1hzh_H 192 LSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEV 269 (457)
T ss_dssp EEEEEEECSGGGGT-SCCEEEEEEGGGTEE-EEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCE
T ss_pred EEEEEEecccccCC-ceEEEEEEeCCCCcc-eeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEE
Confidence 369999999999 999999999765533 22333321 24554 33333332 678999999
Q ss_pred EEEEeecCCC----eEEEEeCCEeccCCCCCCceeecCceEEEcc---CCCCC---CEEEEEEEEeCCceEEEEEEEEE-
Q psy11701 146 ECKASGLPEP----EIHWVHNGKPISQAPPNPRRKVGPNRITIEN---LRKSD---TGNYGCNATNSLGYVYKDVYVNV- 214 (745)
Q Consensus 146 ~C~~~~~p~~----~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~---v~~~d---~G~Y~C~~~~~~g~~~~~~~l~v- 214 (745)
.|.+.|.+++ .+.|+|+|..+............++.|.+.. +...| +|.|+|.|.|..+.......+.+
T Consensus 270 ~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~ 349 (457)
T 1hzh_H 270 TCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA 349 (457)
T ss_dssp EEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCC
T ss_pred EEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcc
Confidence 9999987543 9999999988763221111222344555443 23455 99999999987554433333322
Q ss_pred --eecCCeeeeCCCc-eEEecCceEEEEEEEeecCCC--eEEEeeCCEEccCceE---EEeecC------cEEEcccCCC
Q psy11701 215 --LAHAPEITEAPKD-EYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRY---TILETG------DLKITDVAFA 280 (745)
Q Consensus 215 --~~~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~~~---~~~~~~------~l~i~~~~~~ 280 (745)
...+|.+...+.. ..+..|+ ++|.|.+.+.+++ .+.|+++|..+..... ....++ .|.|.....+
T Consensus 350 ~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~ 428 (457)
T 1hzh_H 350 KGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQ 428 (457)
T ss_dssp CCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHH
T ss_pred cCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHcc
Confidence 2346666554433 3344455 9999999986443 8999999988753221 112233 3555555557
Q ss_pred CCEEEEEEEEeCCc
Q psy11701 281 DSGEYTCFARNKLG 294 (745)
Q Consensus 281 d~G~Y~C~~~n~~g 294 (745)
|.|.|+|.|.|...
T Consensus 429 ~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 429 QGNVFSCSVMHEAL 442 (457)
T ss_dssp TTCCEEEEEECTTS
T ss_pred CCCeEEEEEEECCC
Confidence 89999999999754
No 138
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.91 E-value=5.5e-24 Score=220.89 Aligned_cols=284 Identities=14% Similarity=0.086 Sum_probs=201.8
Q ss_pred EEeecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEE
Q psy11701 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382 (745)
Q Consensus 303 ~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~ 382 (745)
.+..+..+...|....+..|++++|.|.+. . ..+.|++++..+... + .......|.|.++...|.|.|.|.
T Consensus 199 ~~~~~t~i~v~P~~~~v~~Gs~vtl~C~a~-~----~~I~W~~ng~~i~~~---r-i~~~~~~L~I~nl~~sd~g~y~~~ 269 (488)
T 2q7n_A 199 SWIRNTETNVFPQDKVVLAGSNMTICCMSP-T----KVLSGQIGNTLRPLI---H-LYGQTVAIHILNIPVSENSGTNII 269 (488)
T ss_dssp CCCCCSSCCEECTTCEEESSCCCEEEECCS-S----CEEEEEETTEECCCE---E-CSSSCEEEECCSCCCCCSSCEEEE
T ss_pred CCcCCCceEECCCCCEEcCCCCEEEEEECC-C----CEEEEEECCEECchh---h-ccceEEEEEEeCCCcccCCcEEEE
Confidence 333444455667777889999999999987 2 489999999877532 2 234456899999999888777776
Q ss_pred EEeCCceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcc-eeeeeEEEEEEeccCCCCceeEEEEccCc
Q psy11701 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR-GHFRGYKVQTWTEKDGEGSIRELIVNKGE 461 (745)
Q Consensus 383 a~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~-~~i~~y~i~~~~~~~~~~~~~~~~~~~~~ 461 (745)
+.+ +.....+.+.+..||.+|.++.+.. ....++.++|+++...... .++..|.|.|+..+.. ............
T Consensus 270 C~~--~~~i~~~~l~v~~pP~~P~nl~C~~-~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~-~~c~~~~~~~~~ 345 (488)
T 2q7n_A 270 FIT--DDDVYGTVVFAGYPPDVPQKLSCET-HDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKS-AVFHRIEGLTNE 345 (488)
T ss_dssp EEE--SSCEEEEEEEEECCCCCCCSCEEEB-SSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCE-EEEECSSCCCSS
T ss_pred EEc--CCeEEEEEEEeeCCCCCCcccEEEE-cCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCC-CCCccccccCCc
Confidence 664 2234478888999999999999876 6889999999996544322 2578999988654321 001000000134
Q ss_pred eeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCC-CCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEE
Q psy11701 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP-EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540 (745)
Q Consensus 462 ~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~-~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~ 540 (745)
...+++..+...+.|.|+|.|.|..|.++ + .+.+.+. ..+|++|.++++...+.+++.|+|++|...++.+.+|.|+
T Consensus 346 ~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~ 423 (488)
T 2q7n_A 346 TYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIE 423 (488)
T ss_dssp CEEEEEECCSSCCCCEEEEEEEETTEEEE-E-EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEE
T ss_pred eEEEEEcCCCCccEEEEEEEEEeCCCCcc-c-eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEE
Confidence 45666654444699999999999999854 4 3445433 3578999999999889999999999997667899999999
Q ss_pred EEEcCCcccCCcccccccccCCCccee--eecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCC
Q psy11701 541 YQSVKGTKVGPLLERLPYISDPTTTSA--KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606 (745)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~ 606 (745)
|+..+...+..... ........+ .|.+|.|++.|.|+|+|.+ .|.|.+|+++......+++
T Consensus 424 Yr~~~~~~w~~~~~----~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 424 ICKANSKKEVRNAT----IRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp EBCTTSCCEEEEEE----EECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCC
T ss_pred EEECCCCCceEEEE----EecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCC
Confidence 99876543311111 112123455 9999999999999999999 9998777766555555543
No 139
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.91 E-value=8.2e-24 Score=195.29 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=126.9
Q ss_pred ceeEecCCcEEEEEEE---eecCCCeeEEEECCEecCC-----------------CCCeE--eccCCcEEEEccCCCCCC
Q psy11701 42 KEVALRNKKVELFCIF---GGTPLPQTIWSKDGVPINP-----------------SDRIS--QGNYGKSLIIKHVEFSDQ 99 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~---~g~p~~~v~W~~~~~~i~~-----------------~~~~~--~~~~~~~L~i~~~~~~d~ 99 (745)
.+++..|++++|.|.. .+.|.+.|.|+|+|..+.. ..++. .......|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 5678999999999964 6778999999998743321 11222 223345799999999999
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccC-CCCCCcee-e
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ-APPNPRRK-V 177 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~-~~~~~~~~-~ 177 (745)
|.|+|.|.|..|... ..+.|.|..||.+...+....+.+|+++.|.|.+.|.|.|.++|++++..+.. .....+.. .
T Consensus 82 G~Y~C~a~n~~g~~~-~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 82 GNYLCRMKLGETEVT-KQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp EEEEEEEEETTEEEE-EEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred eEEEEEEEcCCCcEE-EEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 999999999988776 67899999999999889999999999999999999999999999987655432 12222333 3
Q ss_pred cCceE---EEccCCCCCCEEEEEEEEeCCceEEE
Q psy11701 178 GPNRI---TIENLRKSDTGNYGCNATNSLGYVYK 208 (745)
Q Consensus 178 ~~~~L---~i~~v~~~d~G~Y~C~~~~~~g~~~~ 208 (745)
.+++| .|.++..+|+|.|+|.|.|..|.+..
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 44544 45689999999999999999998764
No 140
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=1.6e-22 Score=190.19 Aligned_cols=186 Identities=27% Similarity=0.474 Sum_probs=150.0
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee--cCceEEEccC-CCCCCEEEEEEE
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV--GPNRITIENL-RKSDTGNYGCNA 199 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~~L~i~~v-~~~d~G~Y~C~~ 199 (745)
..+|.|...|....+.+|+++.|.|.+.|.|.+.+.|+++|..+........... ....|.|.++ +.+|+|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 4578899999999999999999999999999999999999998874321111111 2356999999 599999999999
Q ss_pred EeCCceEEEEEEEEEeec------CCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC----ceEEEee-
Q psy11701 200 TNSLGYVYKDVYVNVLAH------APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG----GRYTILE- 268 (745)
Q Consensus 200 ~~~~g~~~~~~~l~v~~~------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~----~~~~~~~- 268 (745)
.|..|.....+.|.|... .|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .++....
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~ 163 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS 163 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEec
Confidence 999999888888888753 26777788888899999999999999999999999999988753 2444333
Q ss_pred --cCcEEEcccCCCCCEEEEEEEEeCCceEE-EEEEEEEeecc
Q psy11701 269 --TGDLKITDVAFADSGEYTCFARNKLGTAQ-GSGSLTVKEHT 308 (745)
Q Consensus 269 --~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~~p 308 (745)
.+.|.|.++..+|.|.|+|.|.|..|... ..+.|.|..++
T Consensus 164 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 164 ESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 25799999999999999999999999864 45777776544
No 141
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.90 E-value=8.1e-23 Score=192.49 Aligned_cols=196 Identities=13% Similarity=0.172 Sum_probs=141.9
Q ss_pred CCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCC-cccCCccccc------ccccCCCcceeeecCCCCCc
Q psy11701 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG-TKVGPLLERL------PYISDPTTTSAKLAGLEPST 576 (745)
Q Consensus 504 P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~l~~L~p~t 576 (745)
|.+|.++++...+.++|.|+|++|.+.+++|.+|.|+|+..+. ..|....... ..+.......+.+.+|.|++
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 81 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH 81 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence 3456677777789999999999998878899999999998653 2222111000 00112355788999999999
Q ss_pred cEEEEEEEEecCCCCCCcceeeecc--cC-------CCCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCC
Q psy11701 577 KYRIHLAGYTKAGDGAESKYLFYVP--FK-------NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647 (745)
Q Consensus 577 ~Y~~~V~a~n~~G~g~~S~~~~~~~--~~-------~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~ 647 (745)
.|.|+|.|.|..|.|.+|....... .. .+..+.+....++++.|+|+++. ...+|.|.+|.|.|+..+..
T Consensus 82 ~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 82 TYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp EEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCC
T ss_pred EEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECCCC
Confidence 9999999999999988776332111 11 11223333456789999999887 56778999999999876332
Q ss_pred CCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCccc
Q psy11701 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 727 (745)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~ 727 (745)
..+ ....+.....+++.|.+|.|++.|.|+|+|.|.+|.
T Consensus 161 ~~~-----------------------------------------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 199 (214)
T 2ibg_A 161 GEY-----------------------------------------FKATIEGAHARSFKIAPLETATMYEFKLQSFSAASA 199 (214)
T ss_dssp SCC-----------------------------------------EEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCB
T ss_pred cce-----------------------------------------EEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCcc
Confidence 111 111112345678999999999999999999999999
Q ss_pred CCCCcceEEeCCCC
Q psy11701 728 GPPSEIISFVTPEG 741 (745)
Q Consensus 728 g~~s~~~~~~t~~~ 741 (745)
|++|+++.++|.+.
T Consensus 200 g~~S~~~~~~T~~p 213 (214)
T 2ibg_A 200 SEFSALKQGRTQRP 213 (214)
T ss_dssp CCCCCCEEEECCCC
T ss_pred CCCcceEeeEecCC
Confidence 99999999999763
No 142
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.90 E-value=2.4e-23 Score=195.14 Aligned_cols=192 Identities=16% Similarity=0.198 Sum_probs=142.8
Q ss_pred CCCCCCCCCceeEEEcCCceEEEEeeCCCCCCC-ceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccE
Q psy11701 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG-VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578 (745)
Q Consensus 500 ~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 578 (745)
..++|++|.++++...+. ++.|+|++|.+.+| +|.+|.|+|+..+...|....... ........+.+.+|+|++.|
T Consensus 5 ~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y 81 (209)
T 2vkw_A 5 QADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA--KEASMEGIVTIVGLKPETTY 81 (209)
T ss_dssp CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEH--HHHHHHSEEEECCCCTTCEE
T ss_pred ccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeec--cCCCccceEEeCCCCCCCeE
Confidence 357899999999988877 68999999986666 499999999987655443221100 00123468999999999999
Q ss_pred EEEEEEEecCCCCCCcceeeecccCC--CC---CCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCcc
Q psy11701 579 RIHLAGYTKAGDGAESKYLFYVPFKN--PD---NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653 (745)
Q Consensus 579 ~~~V~a~n~~G~g~~S~~~~~~~~~~--~~---~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~ 653 (745)
.|+|.|.|..|.|++|..+...+... +. .+.+....++++.|+|.++ ...+|.|.+|.|.|+.. ...+...
T Consensus 82 ~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~--~~~~~~~ 157 (209)
T 2vkw_A 82 AVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQ--DDGGSPIRHYLVRYRAL--SSEWKPE 157 (209)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECC--CCTTSCCCEEEEEEEET--TSCCCCC
T ss_pred EEEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECc--ccCCCCCceEEEEEECC--CCCCcee
Confidence 99999999999999988765543322 11 1122245678999999975 56788999999999872 2111110
Q ss_pred CccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcc
Q psy11701 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733 (745)
Q Consensus 654 ~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~ 733 (745)
...++..+++.|.+|.|++.|.|+|+|.|.+|.|++|++
T Consensus 158 -----------------------------------------~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 196 (209)
T 2vkw_A 158 -----------------------------------------IRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHF 196 (209)
T ss_dssp -----------------------------------------EEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred -----------------------------------------eecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchh
Confidence 111456788999999999999999999999999999998
Q ss_pred eEEeCC
Q psy11701 734 ISFVTP 739 (745)
Q Consensus 734 ~~~~t~ 739 (745)
+.+++.
T Consensus 197 ~~~~~~ 202 (209)
T 2vkw_A 197 VFRTAA 202 (209)
T ss_dssp EEECC-
T ss_pred hhhhhh
Confidence 877664
No 143
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.90 E-value=1.8e-24 Score=218.12 Aligned_cols=265 Identities=15% Similarity=0.191 Sum_probs=168.9
Q ss_pred cCeEEecCceeEeeCC--CeEEEEEEEeec-C-CCeEEEEeCCEeccCCCCCCc-ee-----ecCceEEEccCCCCCCEE
Q psy11701 125 APYFTVEPEFINAAEE--ETVTFECKASGL-P-EPEIHWVHNGKPISQAPPNPR-RK-----VGPNRITIENLRKSDTGN 194 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G--~~~~l~C~~~~~-p-~~~v~W~~~g~~~~~~~~~~~-~~-----~~~~~L~i~~v~~~d~G~ 194 (745)
+|.+...+.......| +++.|.|.+.+. | .+.|+|+|+|..+........ .. ...+.|.|.++..+|+|.
T Consensus 7 ~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 86 (323)
T 2wqr_A 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRT 86 (323)
T ss_dssp CCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCC
T ss_pred CCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCc
Confidence 4554444333223344 699999999885 4 469999999998864321100 11 112357888888889999
Q ss_pred EEEEEEeCCceEEEEEEEEE--eecCCe-eeeCCCceEEecCceEEEEEEEeec-CCC---eEEEeeCC-EEccCce-EE
Q psy11701 195 YGCNATNSLGYVYKDVYVNV--LAHAPE-ITEAPKDEYTVDGKTVVLTCRVFGA-PKP---EVNWIHNQ-KELTGGR-YT 265 (745)
Q Consensus 195 Y~C~~~~~~g~~~~~~~l~v--~~~~p~-~~~~~~~~~v~~g~~~~l~C~~~~~-p~~---~i~W~~~~-~~~~~~~-~~ 265 (745)
|+|.|.|..+.....+.+.+ ...+|. +...|....+.+|+.++|.|.+.+. |.+ .|.|++++ ..+.... ..
T Consensus 87 Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~ 166 (323)
T 2wqr_A 87 YTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKE 166 (323)
T ss_dssp EEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEE
T ss_pred EEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCC
Confidence 99999998776544432211 111233 3445555567889999999999886 445 89999975 3332211 11
Q ss_pred -------EeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEE----eecceeecCCCcEEEecCCeEEEEEEEEec
Q psy11701 266 -------ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV----KEHTHITDQPEDYEVEAGQSATFRCNAVSD 334 (745)
Q Consensus 266 -------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v----~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~ 334 (745)
....+.|.|.+++.+|+|.|+|.|.|..+.......+.+ ..+|.+...+.......|+.+.|.|.+.+.
T Consensus 167 ~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 246 (323)
T 2wqr_A 167 EKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNF 246 (323)
T ss_dssp EECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeee
Confidence 012346999999999999999999998643322222221 133433222111111239999999999986
Q ss_pred CCCCcEEEEeeCCeeccCCC---CCeEEEc-----CCeEEEEecCCCCCCEEEEEEEEeCCce
Q psy11701 335 PSLKLSIVWLRGSEPIDFES---EPRFVQS-----NDYSLTVTKSSELDSGQYTCRAQTELDF 389 (745)
Q Consensus 335 ~~~~~~i~W~~~~~~~~~~~---~~~~~~~-----~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 389 (745)
+++.+.+.|++++..+.... ....... ..+.|.|......|.|.|+|.|.|..+.
T Consensus 247 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 247 MPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp BSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 55456899999998875321 0000011 1246888888888999999999998875
No 144
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.90 E-value=2.1e-22 Score=200.73 Aligned_cols=230 Identities=13% Similarity=0.093 Sum_probs=158.8
Q ss_pred ceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEE
Q psy11701 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540 (745)
Q Consensus 461 ~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~ 540 (745)
....++|.++... ...|.|.|.|. |...............+|++|.++.+...+.++++|+|++|.+.+ .+++|.|+
T Consensus 63 ~~~~L~i~~~~~~-~g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~-~~~~Y~v~ 139 (303)
T 1i1r_A 63 TASSVTFTDIASL-NIQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLK 139 (303)
T ss_dssp TEEEEEECSCCCS-EEEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCS-SCCEEEEE
T ss_pred cEEEEEEcCcCCC-ceEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCC-CCcCEEEE
Confidence 3567889998876 46788888773 432211111111224678999999998888899999999998755 46899999
Q ss_pred EEEcCCcccCCcccccccccCCCcceeeecCC-CCCccEEEEEEEEecCCCCCCcceeeecc----cCCCCCCCCC--CC
Q psy11701 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGL-EPSTKYRIHLAGYTKAGDGAESKYLFYVP----FKNPDNVEGR--GS 613 (745)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~----~~~~~~~~~~--~~ 613 (745)
|+......+ ... .......++.|.+| .|++.|+|+|.|.|..|.|.++....... ..+|..+.+. ..
T Consensus 140 ~~~~~~~~~-~~~-----~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~ 213 (303)
T 1i1r_A 140 SEWATHKFA-DCK-----AKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEE 213 (303)
T ss_dssp EEETTEECC-CEE-----CCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSS
T ss_pred EEecCCCCc-cCC-----CcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecC
Confidence 987643211 111 11445688999999 99999999999999999986544322111 1122222222 23
Q ss_pred CCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEE
Q psy11701 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRE 693 (745)
Q Consensus 614 ~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~ 693 (745)
.++++.|+|+++.. .+|.|.+|.|+|+..+. ..|......+
T Consensus 214 ~~~sv~l~W~~p~~--~~~~i~~Y~v~y~~~~~-~~w~~~~~~~------------------------------------ 254 (303)
T 1i1r_A 214 LSSILKLTWTNPSI--KSVIILKYNIQYRTKDA-STWSQIPPED------------------------------------ 254 (303)
T ss_dssp SSSCEEEEEECCGG--GGTSCEEEEEEEEETTC-SSCEECCGGG------------------------------------
T ss_pred CCCEEEEEECCCCC--CCcccEEEEEEEEeCCC-CCceEEcccc------------------------------------
Confidence 67899999997765 46789999999997632 1221110000
Q ss_pred EEEecCCCcEEEecccccCCcceeEEEEecCcccCCC---CcceEEeCCCC
Q psy11701 694 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP---SEIISFVTPEG 741 (745)
Q Consensus 694 ~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~---s~~~~~~t~~~ 741 (745)
..+..+.+.|.+|.|++.|.|+|+|.|.+|.|+| |+++.++|+|+
T Consensus 255 ---~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e~ 302 (303)
T 1i1r_A 255 ---TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302 (303)
T ss_dssp ---GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCCC
T ss_pred ---CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCcC
Confidence 0235678899999999999999999999998776 57899999885
No 145
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.90 E-value=6.8e-23 Score=202.84 Aligned_cols=282 Identities=15% Similarity=0.122 Sum_probs=161.2
Q ss_pred CCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEE-ccCceeEEEe--cccccCcceeE
Q psy11701 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEV--DKFVPASKNFA 478 (745)
Q Consensus 402 p~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~-~~~~~~~~~i--~~L~~~~~Y~~ 478 (745)
+.+|+++++.. . ..++.|+|+++.. .++.+. |.|+|...+. ..|..... .......+.+ ..|.+++.|.|
T Consensus 4 l~~P~nv~~~~-~-n~~~iL~W~pp~~--~~~~v~-Y~V~y~~~~~--~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~ 76 (306)
T 3s98_A 4 LKSPQKVEVDI-I-DDNFILRWNRSDE--SVGNVT-FSFDYQKTGM--DNWIKLSGCQNITSTKCNFSSLKLNVYEEIKL 76 (306)
T ss_dssp ----CCCEEEE-E-TTEEEEECC----------CE-EEEEEEESSC--SSCEECTTCSSBSSSEEECCC---CTTSCEEE
T ss_pred CCCCcEeEEEE-E-CCeEEEEEcCCCC--CCCCeE-EEEEEEECCC--CCcEECCCccCCCCCEEEccccccCCCCcEEE
Confidence 46799999976 4 4567899999643 345565 9999987533 23332210 0123334444 45789999999
Q ss_pred EEEEecCCCCCCCCcceEEeCCCC-CCCCCCceeEEEcCCceEEEEeeCCCCC------CCceeeEEEEEEEcCCcccCC
Q psy11701 479 RVLAFNGAYNGPPSEIISFVTPEG-VPGTVQSLEAIPLGSSAFYLKWVKPEQP------NGVLMGYKIKYQSVKGTKVGP 551 (745)
Q Consensus 479 ~V~a~n~~G~g~~S~~~~~~t~~~-~P~~p~~~~~~~~~~~~i~l~W~~p~~~------~g~i~~Y~v~~~~~~~~~~~~ 551 (745)
||+|.| .|.|+++....+.+.+. .++|| .+.+.... ++|.|+|.||... +|.+.+|.|.|+..+....
T Consensus 77 rV~A~n-~~~S~~s~~~~f~~~~~~~~~pP-~v~~~~~~-~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~-- 151 (306)
T 3s98_A 77 RIRAEK-ENTSSWYEVDSFTPFRKAQIGPP-EVHLEAED-KAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVE-- 151 (306)
T ss_dssp EEEEEC-SSCEEEEECCCBCHHHHCBCCCC-EEEEEECS-SCEEEEEECC---CCCC-----CCEEEEEEEETTTCCC--
T ss_pred EEEEEe-CCcCCCEeeeeEechhhCccCCC-eEEEEEcC-CEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCe--
Confidence 999999 88887776566655443 34455 47776544 6899999966542 4689999999988765421
Q ss_pred cccccccccCCCcceeeecCCCCCccEEEEEEEEe--cCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccc
Q psy11701 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT--KAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIE 629 (745)
Q Consensus 552 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n--~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~ 629 (745)
+. + ......+.|.+|.|++.|.|+|.|+| ..|.|++|......+... .++.+|.+|.+ ..
T Consensus 152 ~~-----~-~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~-----~p~~~P~~v~~--~~----- 213 (306)
T 3s98_A 152 ER-----I-ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE-----NELPPPENIEV--SV----- 213 (306)
T ss_dssp EE-----E-EEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC-----CSSCCCEEEEE--EE-----
T ss_pred EE-----E-ecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC-----CcCCCCceEEE--EE-----
Confidence 11 1 12357899999999999999999999 789999998875554322 11233443332 11
Q ss_pred cCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEE-EEeeeecCCCCeEEEE---EecCCCcEEE
Q psy11701 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV-QTWTEKDGEGSIRELI---VNKGESTTTE 705 (745)
Q Consensus 630 ~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~-a~~~~~~~~~~~~~~~---~~~~~~~~~~ 705 (745)
.+ ..+.|.|.++..+. .|.+... .+.....+.++..+.. ......+.+.
T Consensus 214 ~~---~s~~l~W~~p~~~~------------------------~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~ 266 (306)
T 3s98_A 214 QN---QNYVLKWDYTYANM------------------------TFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCV 266 (306)
T ss_dssp ET---TEEEEEEECSSSSC------------------------EEEEEEEEGGGGSCC----CCCEECGGGTTBSSSEEE
T ss_pred ec---CEEEEEeCCCCCcE------------------------EEEEEEehhhhhccccccccCceECCCceeCCCcccc
Confidence 11 33445554431110 0100000 0000000100101110 0123556677
Q ss_pred ecc-cccCCcceeEEEEecCcccCCCCcceEEeCCC
Q psy11701 706 VDK-FVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740 (745)
Q Consensus 706 i~~-L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~ 740 (745)
+.+ |.+...|.|||+|.|++|.|.+|+.+.|+|..
T Consensus 267 ~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~~~ 302 (306)
T 3s98_A 267 FPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 302 (306)
T ss_dssp EEGGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC--
T ss_pred CchhhcccCCEEEEEEEccCCCccccccccccCccc
Confidence 777 44555999999999999999999999999864
No 146
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.90 E-value=1.1e-23 Score=214.35 Aligned_cols=255 Identities=18% Similarity=0.316 Sum_probs=166.6
Q ss_pred cCceeEeeCCCeEEEEEEEeec--CCCeEEEEeC--CEecc--------------CCCCCCceee------cCceEEEcc
Q psy11701 131 EPEFINAAEEETVTFECKASGL--PEPEIHWVHN--GKPIS--------------QAPPNPRRKV------GPNRITIEN 186 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~--g~~~~--------------~~~~~~~~~~------~~~~L~i~~ 186 (745)
.|....+.+|++++|.|.+.+. +.+.+.|+|+ |..+. ......++.. ....|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 3556788999999999999886 3579999996 33221 0011223332 124899999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CC-CeEEEeeCCEEcc-
Q psy11701 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK-PEVNWIHNQKELT- 260 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~- 260 (745)
++.+|+|.|+|.+.|..+.......|.|.. .+|.+...+....+.+|+.++|.|.+.+. |. +.+.|++++..+.
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 165 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 165 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTE
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCce
Confidence 999999999999998654444456777763 34555544434446789999999999987 54 6899999986531
Q ss_pred ---------CceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEE------------------------Eeec
Q psy11701 261 ---------GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT------------------------VKEH 307 (745)
Q Consensus 261 ---------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~------------------------v~~~ 307 (745)
++.+. ..+.|.|.++..+| |.|+|.|.|..+.......+. +..+
T Consensus 166 ~~~~~~~~~~~~~~--~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (344)
T 1za6_B 166 HTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPRE 242 (344)
T ss_dssp EECCCEECTTSCEE--EEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBC
T ss_pred eECCCeECCCCCEE--EEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcC
Confidence 11221 12368898888777 999999999887643322221 1223
Q ss_pred ceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCe------EEEEecCCCCCCEEEEE
Q psy11701 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY------SLTVTKSSELDSGQYTC 381 (745)
Q Consensus 308 p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~------~l~i~~~~~~~~g~y~c 381 (745)
|.+...+.......|+.+.|.|.+.+.+++.+.+.|++++..+............++ .|.|......|.|.|+|
T Consensus 243 P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC 322 (344)
T 1za6_B 243 PQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSC 322 (344)
T ss_dssp CEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEE
T ss_pred CEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEE
Confidence 332222111111246679999999997655689999999887652211112222222 34454444456999999
Q ss_pred EEEeCCc
Q psy11701 382 RAQTELD 388 (745)
Q Consensus 382 ~a~n~~g 388 (745)
.|.|...
T Consensus 323 ~a~~~~l 329 (344)
T 1za6_B 323 SVMHEAL 329 (344)
T ss_dssp EEECTTS
T ss_pred EEEcCCC
Confidence 9999764
No 147
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.90 E-value=1e-21 Score=181.07 Aligned_cols=174 Identities=26% Similarity=0.458 Sum_probs=145.5
Q ss_pred cCeEEecCceeEeeC-CCeEEEEEEEeecCC--CeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEe
Q psy11701 125 APYFTVEPEFINAAE-EETVTFECKASGLPE--PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~-G~~~~l~C~~~~~p~--~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
+|.+.. +....+.+ |+++.|.|.+.+.|. +.+.|+|+|..+..... ...++.|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~n 77 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK----NASNMEYRINKPRAEDSGEYHCVYHF 77 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCB----CCSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccce----EeccEEEEEecCCcccCEEEEEEEEe
Confidence 566665 44455666 999999999998876 79999999998874322 22557899999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEee--CCEEc----cCceEEEeecC---cE
Q psy11701 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH--NQKEL----TGGRYTILETG---DL 272 (745)
Q Consensus 202 ~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~--~~~~~----~~~~~~~~~~~---~l 272 (745)
. +.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++ ++..+ ...++.+...+ .|
T Consensus 78 ~-~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L 155 (190)
T 2wv3_A 78 V-SAPKANATIEVKA-APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTEL 155 (190)
T ss_dssp T-TEEEEEEEEEEEC-CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEE
T ss_pred C-CcccccEEEEEec-CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEE
Confidence 9 8888888898885 7888888888889999999999999999999999999 77665 34555554433 69
Q ss_pred EEcccC-CCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 273 KITDVA-FADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 273 ~i~~~~-~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
.|.++. .+|.|.|+|.|.|..|.....+.|.|.
T Consensus 156 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 156 NIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999 799999999999999998888888775
No 148
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.90 E-value=2.1e-22 Score=187.08 Aligned_cols=181 Identities=25% Similarity=0.408 Sum_probs=147.1
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee-cC--ceEEEccCCCCCCEEEEEEEE
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV-GP--NRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~-~~--~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
.+|.|...+....+.+|+++.|.|.+.+.|.+.+.|+++|..+........... .. ..|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 478888889999999999999999999999999999999998874332222222 22 289999999999999999999
Q ss_pred eCCceEEEEEEEEEeecCCeeee-----CCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEEe---ecCc
Q psy11701 201 NSLGYVYKDVYVNVLAHAPEITE-----APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTIL---ETGD 271 (745)
Q Consensus 201 ~~~g~~~~~~~l~v~~~~p~~~~-----~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~---~~~~ 271 (745)
|..|.....+.|.|.. +|.+.. .+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .++... ..+.
T Consensus 83 n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEV-PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (197)
T ss_dssp ETTEEEEEEEEEEEEE-EEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEE
T ss_pred ECCCceeEEEEEEEcC-CCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceE
Confidence 9999888888888875 333322 23445688899999999999999999999999988753 344332 2347
Q ss_pred EEEcc-cCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 272 LKITD-VAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 272 l~i~~-~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
|.|.+ +..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 162 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 99999 99999999999999999998888888875
No 149
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.90 E-value=1.7e-22 Score=190.76 Aligned_cols=169 Identities=24% Similarity=0.345 Sum_probs=144.3
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
...+...|.+..+.+|++++|.|.+.|.|.+.+.|+|++..+... .+..|.|.+++.+|+|.|+|.+.+..|.
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~ 90 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVNNNFTF 90 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEECTTCC
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-------CCCEEEEccCChhhCeEeEEEEEcCCCC
Confidence 344567889999999999999999999999999999999998643 2458999999999999999999998876
Q ss_pred eEEEEEEEEEEec---------------CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee
Q psy11701 113 AKSYSIDLSVLAA---------------PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177 (745)
Q Consensus 113 ~~~~~~~l~V~~~---------------p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~ 177 (745)
..+..+.|.|... |.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+....
T Consensus 91 ~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~------- 163 (218)
T 3k0w_A 91 EFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------- 163 (218)
T ss_dssp EECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC-------
T ss_pred ceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC-------
Confidence 6666688888765 677888888899999999999999999999999999999887432
Q ss_pred cCceEEEccCCCCCCEEEEEEEEeCCceE-EEEEEEEEee
Q psy11701 178 GPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVLA 216 (745)
Q Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~-~~~~~l~v~~ 216 (745)
...|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..
T Consensus 164 -~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 164 -KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp -SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred -CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 3589999999999999999999988874 3446666653
No 150
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.1e-22 Score=189.94 Aligned_cols=181 Identities=24% Similarity=0.274 Sum_probs=146.6
Q ss_pred CCCeeEeeccceeEecCCcEEEEEE-EeecCC-CeeEEEECCEecC--CCCCeEeccCCcEEEEccCCCCCCEEEEEEEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCI-FGGTPL-PQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~-~~g~p~-~~v~W~~~~~~i~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 107 (745)
.|......+....+.+|++++|.|. +.+.|. +.+.|+|++..+. ...+......+.+|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 86 (201)
T 3s97_C 7 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVS 86 (201)
T ss_dssp ECCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEE
T ss_pred CCccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEE
Confidence 3555566778889999999999999 888898 9999999998774 33445555566789999999999999999999
Q ss_pred eCCeeeEE--EEEEEEEE-------ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeec
Q psy11701 108 NGVGEAKS--YSIDLSVL-------AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178 (745)
Q Consensus 108 ~~~g~~~~--~~~~l~V~-------~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~ 178 (745)
+..+.... ..+.+.+. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~---~~~~~~ 163 (201)
T 3s97_C 87 SPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPST---AEISTS 163 (201)
T ss_dssp EGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT---CEEETT
T ss_pred ecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc---eeecCC
Confidence 86554432 22333332 3566766666888999999999999999999999999999977632 344456
Q ss_pred CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 179 ~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
.+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 164 GAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 7799999999999999999999999999888888875
No 151
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.90 E-value=5e-25 Score=232.21 Aligned_cols=258 Identities=16% Similarity=0.245 Sum_probs=171.5
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeec-CCC-eeEEEECCEecCC--------CCCeEeccCCcEEEEccCCCCCCEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGT-PLP-QTIWSKDGVPINP--------SDRISQGNYGKSLIIKHVEFSDQGS 101 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~v~W~~~~~~i~~--------~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (745)
+|.++...+.. .+.+|+.++|.|.+.|. |.+ .|.|+|++..+.. ...+.. .+.|.|.+++.+| |.
T Consensus 119 ~P~i~~~~~~~-~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~---~s~L~i~~~~~~d-g~ 193 (434)
T 1igy_B 119 PPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL---SSSVTVPSSPRPS-ET 193 (434)
T ss_dssp CCCEEEECCCC-CCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEE---EEEEEEETTTTTS-SC
T ss_pred CCeEEEcCCcc-ccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEE---EEEEEEcchhcCC-Cc
Confidence 45555444433 46899999999999886 776 9999999876421 011111 2469999999999 99
Q ss_pred EEEEEEeCCeeeEEEEEEEEEEe----------c--CeEEecCce-eE-eeCCCeEEEEEEEeecC----CCeEEEEeCC
Q psy11701 102 YTCEVSNGVGEAKSYSIDLSVLA----------A--PYFTVEPEF-IN-AAEEETVTFECKASGLP----EPEIHWVHNG 163 (745)
Q Consensus 102 Y~C~~~~~~g~~~~~~~~l~V~~----------~--p~~~~~~~~-~~-v~~G~~~~l~C~~~~~p----~~~v~W~~~g 163 (745)
|+|.|.+..+... ....+.+.. . |.+...+.. .. +.+|+++.|.|.+.|.+ .+.+.|+|+|
T Consensus 194 Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~ 272 (434)
T 1igy_B 194 VTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDN 272 (434)
T ss_dssp CEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSS
T ss_pred EEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCC
Confidence 9999999877643 122232210 0 444333332 22 88999999999999873 3589999999
Q ss_pred EeccCCCCCCc------eeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE---eecCCeeeeCCCceEEecCc
Q psy11701 164 KPISQAPPNPR------RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITEAPKDEYTVDGK 234 (745)
Q Consensus 164 ~~~~~~~~~~~------~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v---~~~~p~~~~~~~~~~v~~g~ 234 (745)
..+........ .....+.|.|.++..+|+|.|+|.|.|..|.......+.+ ...+|.+...+.......|+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~ 352 (434)
T 1igy_B 273 VEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKD 352 (434)
T ss_dssp CCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSS
T ss_pred cccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCC
Confidence 87753321111 1112457999999999999999999998875422222221 22366665544433344577
Q ss_pred eEEEEEEEeec-CC-CeEEEeeCCEEccCceEEE---eecC------cEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 235 TVVLTCRVFGA-PK-PEVNWIHNQKELTGGRYTI---LETG------DLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 235 ~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~~---~~~~------~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.++|.|.+.+. |. +.|.|++++..+....... ..++ .|.|.....+|.|.|+|.|.|....
T Consensus 353 ~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 353 KVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred cEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 89999999985 43 3899999998774322111 1223 3666666667899999999997543
No 152
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.90 E-value=1.1e-22 Score=189.07 Aligned_cols=187 Identities=18% Similarity=0.298 Sum_probs=153.2
Q ss_pred ccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEE
Q psy11701 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~ 479 (745)
.+|.+|.++.+.. .+.+++.|.|+++. ...+.++.+|.|+|+..... .+..+.. ......+.+.+|.+++.|.|+
T Consensus 4 ~~P~~P~~l~~~~-~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~--~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~ 78 (197)
T 3lpw_A 4 DTPGPPQDLKVKE-VTKTSVTLTWDPPL-LDGGSKIKNYIVEKRESTRK--AYSTVAT-NCHKTSWKVDQLQEGCSYYFR 78 (197)
T ss_dssp CSCCCCEEEEEEE-ECSSCEEEEEECCS-CCTTSCCCEEEEEEEETTCS--SCEEEEE-EECSSEEEECCCCTTCEEEEE
T ss_pred CCCCCCCCcEEEE-ecCCEEEEEEcCCc-cCCCCcccEEEEEEEECCCC--ccEEeec-CCCccEEEEcCCCCCCEEEEE
Confidence 5789999999887 88999999999853 23334589999988766442 3444444 456788999999999999999
Q ss_pred EEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCC-ceeeEEEEEEEcCCcccCCccccccc
Q psy11701 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG-VLMGYKIKYQSVKGTKVGPLLERLPY 558 (745)
Q Consensus 480 V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~ 558 (745)
|.|.|..|.+.++....+.+...+|.+|.++.+...+.+++.|+|.+|...++ .+.+|.|+|+..+...+....
T Consensus 79 V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----- 153 (197)
T 3lpw_A 79 VLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA----- 153 (197)
T ss_dssp EEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-----
T ss_pred EEEEcCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-----
Confidence 99999999998887767777788899999999999999999999999876554 999999999987655433222
Q ss_pred ccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceee
Q psy11701 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598 (745)
Q Consensus 559 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~ 598 (745)
....+++.+.+|.|++.|.|+|.|.|..|.|++|....
T Consensus 154 --~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~ 191 (197)
T 3lpw_A 154 --TVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSV 191 (197)
T ss_dssp --EESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSS
T ss_pred --cccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcc
Confidence 34568899999999999999999999999999986653
No 153
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.90 E-value=1.2e-22 Score=188.81 Aligned_cols=164 Identities=19% Similarity=0.257 Sum_probs=133.1
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCe-eEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQ-TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~-v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
..+...|.+..+.+|++++|.|.+.+.|.+. +.|+|+|..|... ...|.|.+++.+|+|.|+|.+.+...
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~--------~~~L~i~~v~~~D~G~Y~C~a~n~~~- 78 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ--------ASSYFIDAATVDDSGEYRCQTQLSTL- 78 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC--------SSEEEESSCCGGGCEEEEEEETTSBC-
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC--------ccEEEEecccccCCEEEEEEeCCCcc-
Confidence 3456777778999999999999999988775 9999999988733 36899999999999999999976422
Q ss_pred eEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCC
Q psy11701 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL-PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191 (745)
Q Consensus 113 ~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d 191 (745)
+..+.|.|..+|.+...+. ..+.+|++++|.|.+.+. |.+.+.|+|+|..+.. ....+.|.|.+++.+|
T Consensus 79 --s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~-------~~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 79 --SDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY-------FHHNSDFYIPKATLKD 148 (204)
T ss_dssp --CCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-------EEECCCEEESSCCGGG
T ss_pred --cccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-------ccCCceEEECcCCccc
Confidence 3457888888887766665 678899999999999665 5679999999998642 2346789999999999
Q ss_pred CEEEEEEEEeCCc-eEEEEEEEEEee
Q psy11701 192 TGNYGCNATNSLG-YVYKDVYVNVLA 216 (745)
Q Consensus 192 ~G~Y~C~~~~~~g-~~~~~~~l~v~~ 216 (745)
+|.|+|.|.|..+ ..+..+.|.|..
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (204)
T 3sgj_C 149 SGSYFCRGLVGSKNVSSETVQITITQ 174 (204)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEEEeCCCceecCcEEEEEeC
Confidence 9999999999543 444457777764
No 154
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=6.2e-23 Score=193.35 Aligned_cols=181 Identities=20% Similarity=0.374 Sum_probs=143.9
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEec------------CCCCCeEeccCCcEEEEccCCCCCCE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI------------NPSDRISQGNYGKSLIIKHVEFSDQG 100 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i------------~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (745)
|..+...+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+ ....++.+.. .+|.|.+++.+|+|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~v~~~D~G 78 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--SGITFSSVTRKDNG 78 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET--TEEEESCCCGGGCE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec--eeEEEcccCcccCe
Confidence 456677888999999999999999998899999999987652 1234555433 78999999999999
Q ss_pred EEEEEEEeCCee-eEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEE-EeecCCCeEEEEeCCE-eccCCCCC-----
Q psy11701 101 SYTCEVSNGVGE-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK-PISQAPPN----- 172 (745)
Q Consensus 101 ~Y~C~~~~~~g~-~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~-~~~~p~~~v~W~~~g~-~~~~~~~~----- 172 (745)
.|+|.+.+..|. ..+..+.|.|..+|.+...+....+.+|+.+.|.|. +.+.|.+.+.|++++. .+......
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~ 158 (212)
T 1f97_A 79 EYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFM 158 (212)
T ss_dssp EEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCS
T ss_pred EEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccccccc
Confidence 999999997662 334678899999988777666678899999999999 6889999999999999 87643322
Q ss_pred -Ccee--ecCceEEEccCCCCCCEEEEEEEEeCCceEEE--EEEEEEe
Q psy11701 173 -PRRK--VGPNRITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVL 215 (745)
Q Consensus 173 -~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~--~~~l~v~ 215 (745)
.... ...+.|.|.++..+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 159 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 159 NSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp SSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred CceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 1122 24678999999999999999999999998733 4566554
No 155
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.89 E-value=1.9e-21 Score=192.06 Aligned_cols=258 Identities=17% Similarity=0.193 Sum_probs=189.1
Q ss_pred cCCCcEEE--ecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeE-EEcCCeEEEEecCCCCCCEEEEEEEEeCCc
Q psy11701 312 DQPEDYEV--EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELD 388 (745)
Q Consensus 312 ~~p~~~~~--~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 388 (745)
..|.++.+ .....+.|.|.....+...+.+.|......- ..... .......+.|.++.....+.+++.|.|..|
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g 92 (283)
T 1tdq_A 16 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEG---GKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTN 92 (283)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSC---CCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCC---CcEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCC
Confidence 34444443 3456788888766533334677774321110 11111 123456789999999999999999999887
Q ss_pred eEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCc---eeEE
Q psy11701 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE---STTT 465 (745)
Q Consensus 389 ~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~---~~~~ 465 (745)
.+. ...+.+..+|.+|.++.+.. .+.+++.|.|+++. +.+.+|.|+|+...... +....+ ... ...+
T Consensus 93 ~s~-~~~~~~~t~p~~P~~l~~~~-~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~--~~~~~~-~~~~~~~~~~ 162 (283)
T 1tdq_A 93 ESD-ASSTQFTTEIDAPKNLRVGS-RTATSLDLEWDNSE-----AEAQEYKVVYSTLAGEQ--YHEVLV-PKGIGPTTKT 162 (283)
T ss_dssp ECC-CEEEEEECCCCCCEEEEEEE-ECSSCEEEEEECCS-----SCCSEEEEEEEETTCCC--CEEEEE-ECCSSSEEEE
T ss_pred CCC-CeeEEEECCCCCCCceEEEe-cCCCeEEEEecCCC-----CCccEEEEEEEeCCCCc--ceEEEC-CCCCcccceE
Confidence 653 45566677889999999887 88999999999853 56889999887765432 234444 344 7899
Q ss_pred EecccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcC
Q psy11701 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545 (745)
Q Consensus 466 ~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~ 545 (745)
++.+|.+++.|.|+|.|.|..|.|.+.. +...+ .|.+|.++.+...+.+++.|+|++| +|.|.+|.|+|+..+
T Consensus 163 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t---~~~~P~~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~ 235 (283)
T 1tdq_A 163 TLTDLVPGTEYGVGISAVMNSKQSIPAT-MNART---ELDSPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSS 235 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCCCCEEEEEEEECSSCEEEEEECC---CSCCSEEEEEEECSS
T ss_pred EEecCCCCCEEEEEEEEEeCCCCCcceE-EEecC---CCCCCCccEEeEecCCEEEEEEeCC---CCcccEEEEEEEcCC
Confidence 9999999999999999999998876543 33333 3457789999999999999999986 468999999999765
Q ss_pred CcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcce
Q psy11701 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596 (745)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~ 596 (745)
+... .. .+ .....++.|.+|.|++.|.|+|.|.|..|.|+++..
T Consensus 236 ~~~~--~~----~~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~ 279 (283)
T 1tdq_A 236 GISS--EV----TV-PRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTV 279 (283)
T ss_dssp SCCE--EE----EE-ESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred CCee--EE----Ee-CCCccEEEECCCCCCCEEEEEEEEEcCCCCCcceee
Confidence 4321 11 12 456789999999999999999999999999998643
No 156
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.89 E-value=2.4e-21 Score=191.91 Aligned_cols=258 Identities=14% Similarity=0.189 Sum_probs=191.0
Q ss_pred ecCCCcEEE--ecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeE-EEcCCeEEEEecCCCCCCEEEEEEEEeCC
Q psy11701 311 TDQPEDYEV--EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTEL 387 (745)
Q Consensus 311 ~~~p~~~~~--~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 387 (745)
+..|.++.+ .....+.|.|.....+...+.+.|...+.... .... .......+.+.++.....+.|++.|.|..
T Consensus 21 p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~ 97 (290)
T 3r8q_A 21 IPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGP---MKEINLAPDSSSVVVSGLMVATKYEVSVYALKDT 97 (290)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSC---CEEEEECTTCCEEEECSCCSSCEEEEEEEEEETT
T ss_pred CCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCc---eEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeCC
Confidence 345555544 34567889988764444457788776432111 1111 12234678999999999999999999988
Q ss_pred ceEEEEEEEEEec--cCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEE
Q psy11701 388 DFIEAQATLTVQV--PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465 (745)
Q Consensus 388 g~~~~~~~l~v~~--pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (745)
|.+.... ..+.. .+.+|.++.+.. .+.+++.|.|+++ ++.+.+|.|+|+...... .....+ ......+
T Consensus 98 g~s~~s~-~~~~t~~~~~~P~~l~~~~-~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~--~~~~~~-~~~~~~~ 167 (290)
T 3r8q_A 98 LTSRPAQ-GVVTTLENVSPPRRARVTD-ATETTITISWRTK-----TETITGFQVDAVPANGQT--PIQRTI-KPDVRSY 167 (290)
T ss_dssp EECCCEE-EEEECCCCCCCCEEEEEEE-ECSSCEEEEEECC-----SCCCCEEEEEEEESSSCC--CEEEEE-CTTCSEE
T ss_pred CCCCCcc-eeEecCCCCCCCceeEEEE-cCCCeEEEEEeCC-----CCcccEEEEEEEECCCCc--ceEEec-CCCccEE
Confidence 8655442 22332 357888898887 8899999999984 356889999988765432 233444 5677889
Q ss_pred EecccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcC
Q psy11701 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545 (745)
Q Consensus 466 ~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~ 545 (745)
+|.+|.+++.|.|+|.|.|..|.|.+.. +.+.+ .|.+|.++.+...+.+++.|+|++|. |.+.+|.|+|+..+
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~ 240 (290)
T 3r8q_A 168 TITGLQPGTDYKIYLYTLNDNARSSPVV-IDAST---AIDAPSNLRFLATTPNSLLVSWQPPR---ARITGYIIKYEKPG 240 (290)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCCCCEEEEEEEEETTEEEEEEECCS---SCCCEEEEEEECTT
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCCEE-EEecC---CCCCCCccEEEeeCCCEEEEEEeCCC---CcccEEEEEEEeCC
Confidence 9999999999999999999999887643 44444 37778899999889999999999986 48999999999876
Q ss_pred CcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCC
Q psy11701 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593 (745)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~ 593 (745)
...+.... .......++.+.+|.|++.|.|+|.|.|..|.|.+
T Consensus 241 ~~~~~~~~-----~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 241 SPPREVVP-----RPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp SCCEECSS-----CCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred CCcceeEe-----ccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 54332111 11456789999999999999999999999999987
No 157
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.89 E-value=3e-22 Score=204.20 Aligned_cols=306 Identities=12% Similarity=0.082 Sum_probs=152.5
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeccCCCCCCceeEEeec-CceeEEEEEeCCC-CCcceeeeeEEEEEEeccCCCCcee
Q psy11701 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID-AKKAVVSWNPVSP-QSLRGHFRGYKVQTWTEKDGEGSIR 453 (745)
Q Consensus 376 ~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~-~~~v~l~W~~~~~-~~~~~~i~~y~i~~~~~~~~~~~~~ 453 (745)
.+.+...+.+..|..... . ...+|.||.++.+.. .+ .+++.|+|+++.+ +..++.+..|+|+|+..+. ..|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~--~~v~~~pP~nl~v~~-~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~--~~w~ 82 (380)
T 3lb6_C 9 GCLYTFLISTTFGCTSSS-D--TEIKVNPPQDFEIVD-PGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGS--ETWK 82 (380)
T ss_dssp -------------------------CCCCCEEEEEEC-CSSSSEEEEEEECCCC------CCCEEEEEEEETTC--SSCE
T ss_pred hhhhhheeecccccccCC-c--ccccCCcCCceEEEe-cCcCceEEEEECCCCCccccccceEEEEEEECCCCC--Ccce
Confidence 455566666766644221 1 123578999999876 44 6889999999765 3356778999999987653 3455
Q ss_pred EEEEccCceeEEEecccccCcceeEEEEEecC----CCCCCCCcceEEe---CCCC-CCCCCCceeEEEcCCceEEEEee
Q psy11701 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNG----AYNGPPSEIISFV---TPEG-VPGTVQSLEAIPLGSSAFYLKWV 525 (745)
Q Consensus 454 ~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~----~G~g~~S~~~~~~---t~~~-~P~~p~~~~~~~~~~~~i~l~W~ 525 (745)
.+.. . ... ...++..+..|+|+|+|.|. .|.|.+|...... +.++ +|++|.++++...+.+++.++|+
T Consensus 83 ~~~~-~-~~~--~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~ 158 (380)
T 3lb6_C 83 TIIT-K-NLH--YKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWK 158 (380)
T ss_dssp EEEE-S-SSE--EEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEE
T ss_pred EEEe-c-cEE--EEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEc
Confidence 5554 2 222 23355558999999999975 6777766544433 3444 46789999999999999999999
Q ss_pred CCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeee--cCCCCCccEEEEEEEEecCCCCCCcceeeecccC
Q psy11701 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL--AGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603 (745)
Q Consensus 526 ~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~ 603 (745)
++.+. +..++|.|+|+..+...+..+.... ...+......+ .++.+++.|.|+|.|.|..|.+.++.........
T Consensus 159 p~~~~-~~~~~Y~l~y~~~~~~~~~~C~~~~--~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~~~~~~~~~ 235 (380)
T 3lb6_C 159 PGIGV-LLDTNYNLFYWYEGLDHALQCVDYI--KADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNI 235 (380)
T ss_dssp CC-------CCEEEEEECTTCSSCEECSEEE--EC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCEEEEECGGGS
T ss_pred CCCCC-CCCccEEEEEEECCCCccccCCCcc--ccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccccEEEcHHHc
Confidence 88753 5678999999876543222221100 11122223444 4678999999999999999987764433222221
Q ss_pred CCC----CCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEE
Q psy11701 604 NPD----NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679 (745)
Q Consensus 604 ~~~----~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~ 679 (745)
..+ ++.+.....+++.|+|++|... ..+.+..|.|+|++. +..|...
T Consensus 236 v~p~pP~~l~v~~~~~~~l~l~W~~P~~~-~~~~~l~Yev~y~~~--~~~w~~~-------------------------- 286 (380)
T 3lb6_C 236 VKPLPPVYLTFTRESSCEIKLKWSIPLGP-IPARCFDYEIEIRED--DTTLVTA-------------------------- 286 (380)
T ss_dssp CCCCCCEEEEEC-------CEEEECCSSS-CCSTTEEEEECC----------CC--------------------------
T ss_pred ccCCCCceEEEEEcCCCeEEEEECCCCCC-CCcceEEEEEEEEeC--CCCceEe--------------------------
Confidence 111 2222223456788899876643 224667888888753 1111100
Q ss_pred EEeeeecCCCCeEEEEEecCCCcEEEecc-cccCCcceeEEEEecC-----cc-cCCCCcceEEeCCCCC
Q psy11701 680 QTWTEKDGEGSIRELIVNKGESTTTEVDK-FVPASKNFARVLAFNG-----AY-NGPPSEIISFVTPEGG 742 (745)
Q Consensus 680 a~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~~~Y~~~v~A~~~-----~G-~g~~s~~~~~~t~~~~ 742 (745)
. .. ..+.|.+ |+|++.|.|+|+|... .| .|.||+++.|.|++..
T Consensus 287 ---------------~--~~--~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~~ 337 (380)
T 3lb6_C 287 ---------------T--VE--NETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLS 337 (380)
T ss_dssp ---------------E--ES--SSCC------------CCEEEEECTTTCSSCCCCCCCCC---------
T ss_pred ---------------c--cc--ceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCCC
Confidence 0 01 1355778 9999999999999843 34 3788999999998653
No 158
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.89 E-value=1.6e-22 Score=193.06 Aligned_cols=194 Identities=21% Similarity=0.311 Sum_probs=145.2
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEE
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 581 (745)
.+|++|.++++...+.+++.|+|++| +|.+.+|.|+|+..+........ + ....+++.|.+|.|++.|.|+
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~-----~-~~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHL-----L-DSKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEE-----E-EESSSEEEECSCCTTCEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEE-----E-cCCccEEEECCCCCCCEEEEE
Confidence 56789999999999999999999998 46899999999986543322111 1 356689999999999999999
Q ss_pred EEEEecCCCCCCcceeeecccCCC----CCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccc
Q psy11701 582 LAGYTKAGDGAESKYLFYVPFKNP----DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657 (745)
Q Consensus 582 V~a~n~~G~g~~S~~~~~~~~~~~----~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~ 657 (745)
|.|.|..|.|++|..+...+.... ..+.+.....+++.|+|+++. ..+|.|.+|.|.|+..+.......
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~----- 147 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPA--ETNGEITAYEVCYGLVNDDNRPIG----- 147 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCS--CCSSCCCEEEEEEEEBCTTSCBSS-----
T ss_pred EEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCC--CCCCceeEEEEEEEECCCCCCccC-----
Confidence 999999999999877655443322 222333456788999999764 467899999999987643321000
Q ss_pred cccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcc-eEE
Q psy11701 658 WRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISF 736 (745)
Q Consensus 658 ~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~-~~~ 736 (745)
....+.+.....+++.|.+|.|++.|.|+|+|.|.+|.|++|++ +.+
T Consensus 148 --------------------------------~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 195 (234)
T 3f7q_A 148 --------------------------------PMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINL 195 (234)
T ss_dssp --------------------------------CCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECG
T ss_pred --------------------------------cceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEe
Confidence 00111111345678999999999999999999999999999984 888
Q ss_pred eCCCCCc
Q psy11701 737 VTPEGGT 743 (745)
Q Consensus 737 ~t~~~~~ 743 (745)
+|.++.+
T Consensus 196 ~T~~~~P 202 (234)
T 3f7q_A 196 ATQPKRP 202 (234)
T ss_dssp GGSCCCC
T ss_pred ecCCCCC
Confidence 8876654
No 159
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=2.9e-22 Score=191.62 Aligned_cols=175 Identities=27% Similarity=0.489 Sum_probs=142.7
Q ss_pred cceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCe---EeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEE
Q psy11701 41 KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRI---SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS 117 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~ 117 (745)
....+.+|++++|.|.+.|.|.+.+.|+|++..+....++ .....+.+|.|.+++.+|+|.|+|.+.+..|... ..
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~-~~ 105 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSIN-HT 105 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEE-EE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCccc-cc
Confidence 7888999999999999999999999999999998765432 4445566899999999999999999999887765 66
Q ss_pred EEEEEEec----CeEEe-cCceeEeeCCCeEEEEEEEeecCCCeEEEEe----CCEeccCCCCCCce--------eecCc
Q psy11701 118 IDLSVLAA----PYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVH----NGKPISQAPPNPRR--------KVGPN 180 (745)
Q Consensus 118 ~~l~V~~~----p~~~~-~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~----~g~~~~~~~~~~~~--------~~~~~ 180 (745)
+.|.|... |.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+......... ....+
T Consensus 106 ~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (231)
T 3ojm_B 106 YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAE 185 (231)
T ss_dssp EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTT
T ss_pred EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCcc
Confidence 78888753 33322 3567788999999999999999999999999 77776533221111 11245
Q ss_pred eEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 181 ~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
.|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 186 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (231)
T 3ojm_B 186 VLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLP 221 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEec
Confidence 799999999999999999999999998889998875
No 160
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=4.1e-22 Score=191.84 Aligned_cols=176 Identities=28% Similarity=0.464 Sum_probs=141.7
Q ss_pred ccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCC---eEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEE
Q psy11701 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSY 116 (745)
Q Consensus 40 ~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 116 (745)
+....+.+|++++|.|.+.|.|.+.+.|+|++..+....+ ........+|.|.+++.+|+|.|+|.+.+..+... .
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~-~ 100 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR-Q 100 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEE-E
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceE-E
Confidence 4578999999999999999999999999999999875433 34445567899999999999999999999887765 5
Q ss_pred EEEEEEEe----cCeEE-ecCceeEeeCCCeEEEEEEEeecCCCeEEEEe----CCEeccCCCCCCce---------eec
Q psy11701 117 SIDLSVLA----APYFT-VEPEFINAAEEETVTFECKASGLPEPEIHWVH----NGKPISQAPPNPRR---------KVG 178 (745)
Q Consensus 117 ~~~l~V~~----~p~~~-~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~----~g~~~~~~~~~~~~---------~~~ 178 (745)
.+.|.|.. +|.+. ..+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+......... ...
T Consensus 101 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 180 (241)
T 3grw_A 101 TYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEA 180 (241)
T ss_dssp EEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEE
T ss_pred EEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCC
Confidence 67788865 23333 34667788999999999999999999999999 88777543322111 113
Q ss_pred CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 179 ~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
.+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 181 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 181 DVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred ceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 45799999999999999999999999999888888875
No 161
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.89 E-value=3.6e-22 Score=207.83 Aligned_cols=274 Identities=16% Similarity=0.147 Sum_probs=170.4
Q ss_pred CCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEE----EEccCceeEEEecccccCccee
Q psy11701 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL----IVNKGESTTTEVDKFVPASKNF 477 (745)
Q Consensus 402 p~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~L~~~~~Y~ 477 (745)
+.+|+++.+.. . ..++.|+|+++.. .++.+. |.|+|+..+.. .|... .+ ......++..+|.+++.|.
T Consensus 8 l~~P~nv~~~~-~-~~~~~L~W~p~~~--~~~~i~-Y~V~y~~~~~~--~W~~~~~c~~~-~~~~~~~t~~~l~~~~~Y~ 79 (414)
T 3se4_A 8 LKSPQKVEVDI-I-DDNFILRWNRSDE--SVGNVT-FSFDYQKTGMD--NWIKLSGCQNI-TSTKCNFSSLKLNVYEEIK 79 (414)
T ss_dssp ---CCCCCEEE-E-TTEEEEC------------CE-EEEEEEESSCC--CCEEEEEEEEE-SCSCEECCSSCCCTTSCEE
T ss_pred CCCCceeEEEE-E-CCceEEEEcCCCC--CCCCeE-EEEEEEECCCC--CcEECcCccCC-CCCEEECCcccccCCCcEE
Confidence 46789999987 4 4578999999654 345666 99999875432 33322 22 3344555666789999999
Q ss_pred EEEEEecCCCCCCCCcceEEeCCCC-CCCCCCceeEEEcCCceEEEEeeCCCCCC-------CceeeEEEEEEEcCCccc
Q psy11701 478 ARVLAFNGAYNGPPSEIISFVTPEG-VPGTVQSLEAIPLGSSAFYLKWVKPEQPN-------GVLMGYKIKYQSVKGTKV 549 (745)
Q Consensus 478 ~~V~a~n~~G~g~~S~~~~~~t~~~-~P~~p~~~~~~~~~~~~i~l~W~~p~~~~-------g~i~~Y~v~~~~~~~~~~ 549 (745)
|||+|.| .|.+.++....+.+... .++|| .+.+... .++|.|+|. |...+ +.+.+|.|.|...+....
T Consensus 80 ~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP-~v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~ 155 (414)
T 3se4_A 80 LRIRAEK-ENTSSWYEVDSFTPFRKAQIGPP-EVHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVE 155 (414)
T ss_dssp EEEEEEE-TTEEEEEECCCBCHHHHCCCCCC-EEEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCE
T ss_pred EEEEEee-CCcCCCEecCceeecccceeCCC-eEEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCce
Confidence 9999999 55555543333332222 23344 4776654 468999999 65332 468899999988765432
Q ss_pred CCcccccccccCCCcceeeecCCCCCccEEEEEEEEec--CCCCCCcceeeecccCCCC-----CCCCCCCCCcceeEEE
Q psy11701 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK--AGDGAESKYLFYVPFKNPD-----NVEGRGSTPNNLVISW 622 (745)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~--~G~g~~S~~~~~~~~~~~~-----~~~~~~~~p~~~~v~W 622 (745)
.. + ......+.|.+|.|++.|.|+|.|+|. .|.|++|......+...++ ++..... ..++.|+|
T Consensus 156 ~~-------~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~-~~~~~l~W 226 (414)
T 3se4_A 156 ER-------I-ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLKW 226 (414)
T ss_dssp EE-------E-EEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEE-TTEEEEEE
T ss_pred EE-------E-ecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEe-cCCeEEEE
Confidence 11 1 234578999999999999999999994 7888888765443322111 1111111 24578899
Q ss_pred eecCccccCCCcceEEEEEecc------C-CCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEE
Q psy11701 623 TAMPEIEHNAPHFKYRIFWRRH------N-TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELI 695 (745)
Q Consensus 623 ~~~~~~~~~g~i~~y~i~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~ 695 (745)
+++. .+ .+|.|+|+.. + +...|..... .
T Consensus 227 ~pp~---~~---~~Y~v~y~~~~~~~~~~~~~~~w~~~~~--------------------------------~------- 261 (414)
T 3se4_A 227 DYTY---AN---MTFQVQWLHAFLKRNPGNHLYKWKQIPD--------------------------------C------- 261 (414)
T ss_dssp ECSS---SS---CEEEEEEEESGGGSCCCC--CCCCBCST--------------------------------T-------
T ss_pred CCCC---CC---eEEEEEEEehhccccccccccCceECCC--------------------------------c-------
Confidence 8753 12 5899998853 0 1111211000 0
Q ss_pred EecCCCcEEEec-ccccCCcceeEEEEecCcccCCCCcceEEeCCCCC
Q psy11701 696 VNKGESTTTEVD-KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGG 742 (745)
Q Consensus 696 ~~~~~~~~~~i~-~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~~~ 742 (745)
.....+.+.+. +|.+++.|.|+|+|.|+.|.|++|+.+.|.|.++.
T Consensus 262 -~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~ 308 (414)
T 3se4_A 262 -ENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQA 308 (414)
T ss_dssp -TTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC-
T ss_pred -cCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhcc
Confidence 01133455555 69999999999999999999999999999998764
No 162
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.89 E-value=3.2e-22 Score=181.47 Aligned_cols=165 Identities=18% Similarity=0.237 Sum_probs=131.6
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCe-eEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ-TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~-v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
+++.+...|....+.+|++++|.|.+.+.|.+. +.|+|++..+. ..+..|.|.+++.+|+|.|+|.+.+..
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 77 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS--------SQASSYFIDAATVNDSGEYRCQTNLST 77 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEE--------SSCSEEEESSCCGGGCEEEEEECSSSC
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEcc--------CCceEEEEeCCCcccCEEEEEEeeCCc
Confidence 445566788888999999999999999888775 88999998876 345689999999999999999998754
Q ss_pred eeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCC-eEEEEeCCEeccCCCCCCceeecCceEEEccCCC
Q psy11701 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP-EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRK 189 (745)
Q Consensus 111 g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~ 189 (745)
+ +..+.|.|..++.+... ....+.+|+.+.|.|.+.+.+++ .+.|+|+|..+.. ......|.|.+++.
T Consensus 78 ~---s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-------~~~~~~L~i~~v~~ 146 (175)
T 1fnl_A 78 L---SDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-------FHHNSDFHIPKATL 146 (175)
T ss_dssp C---CCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-------EEECCCEEESSCCG
T ss_pred c---cccEEEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-------CCCCCEEEEcccCh
Confidence 4 24577888766654443 44678899999999999876654 9999999998742 23467899999999
Q ss_pred CCCEEEEEEEEeCCce-EEEEEEEEEe
Q psy11701 190 SDTGNYGCNATNSLGY-VYKDVYVNVL 215 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g~-~~~~~~l~v~ 215 (745)
+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 147 ~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 147 KDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred hhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 9999999999997654 3334566664
No 163
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.89 E-value=5.7e-22 Score=186.71 Aligned_cols=191 Identities=26% Similarity=0.484 Sum_probs=149.0
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCC---ceeecCceE-----EEccCCCCCCEEE
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP---RRKVGPNRI-----TIENLRKSDTGNY 195 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~---~~~~~~~~L-----~i~~v~~~d~G~Y 195 (745)
.+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+....... +....++.+ .|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 37788888999999999999999999999999999999999887543221 222334444 4456799999999
Q ss_pred EEEEEeCCceE-EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEccCc-eEEEeecCcE
Q psy11701 196 GCNATNSLGYV-YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGG-RYTILETGDL 272 (745)
Q Consensus 196 ~C~~~~~~g~~-~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~l 272 (745)
+|.+.|..|.. ...+.|.|...++.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+... ......++.|
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L 167 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKL 167 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEE
T ss_pred EEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeE
Confidence 99999998865 345777777667777777888889999999999998 88899999999999887632 2233456789
Q ss_pred EEcccCCCCCEEEEEEEEeCCceEEE-EEEEEEeecceeecCC
Q psy11701 273 KITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQP 314 (745)
Q Consensus 273 ~i~~~~~~d~G~Y~C~~~n~~g~~~~-~~~l~v~~~p~~~~~p 314 (745)
.|.++..+|.|.|+|.|.|..|.... .+.|.|..+|.+...|
T Consensus 168 ~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 168 MITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred EEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 99999999999999999999998654 4899999888776555
No 164
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.89 E-value=4.4e-22 Score=187.46 Aligned_cols=169 Identities=26% Similarity=0.417 Sum_probs=136.1
Q ss_pred EecCCcEEEEEEEeec-CCCeeEEEECCEecCCCCCeEeccCC--cEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEE
Q psy11701 45 ALRNKKVELFCIFGGT-PLPQTIWSKDGVPINPSDRISQGNYG--KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLS 121 (745)
Q Consensus 45 v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~i~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~ 121 (745)
..+|+.+.|.|.+.+. |.+.+.|+|+|.+|....++.+...+ ..|.|.+++.+|+|.|+|.+.+..|... ..+.|.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~-~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQ-KTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEE-EEEEEC
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceE-EEEEEE
Confidence 3467888899988775 58899999999999988887654444 4699999999999999999999877655 556665
Q ss_pred EEe--------------------cC-eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeec--
Q psy11701 122 VLA--------------------AP-YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG-- 178 (745)
Q Consensus 122 V~~--------------------~p-~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~-- 178 (745)
|.. .| .+...|....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+...... .....
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~-~~~~~~~ 171 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHC-NLKFEAG 171 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSE-EEEEETT
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCE-EEEEcCC
Confidence 542 33 3444567788999999999999999999999999999998754321 11111
Q ss_pred -CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 179 -PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 179 -~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
...|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 172 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 172 RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 2389999999999999999999999998888888886
No 165
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=8.3e-22 Score=182.65 Aligned_cols=176 Identities=23% Similarity=0.433 Sum_probs=145.4
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCC-Cceee-c--------CceEEEccCCCCCCE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPN-PRRKV-G--------PNRITIENLRKSDTG 193 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~-~~~~~-~--------~~~L~i~~v~~~d~G 193 (745)
+|.|...|....+.+|+++.|.|.+. +.|.+.+.|+|+|..+...... .+... . .+.|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 67888999999999999999999998 8999999999999998754211 11111 1 358999999999999
Q ss_pred EEEEEEEeCCceEEEE-EEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCC-eEEEeeCCEEccCceEEEeecCc
Q psy11701 194 NYGCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP-EVNWIHNQKELTGGRYTILETGD 271 (745)
Q Consensus 194 ~Y~C~~~~~~g~~~~~-~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~ 271 (745)
.|+|.+.+..+..... +.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+ .+.|++++..+...... ...+.
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-~~~~~ 159 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEG-LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-GPQRS 159 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECC-SCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-SCCEE
T ss_pred EEEEEEEeCCCceecccEEEEEec-CCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-CCCCe
Confidence 9999999988775544 7788764 7888888888899999999999999999999 99999999887543211 34557
Q ss_pred EEEcccCCCCCEEEEEEEEeCCceEE-EEEEEEE
Q psy11701 272 LKITDVAFADSGEYTCFARNKLGTAQ-GSGSLTV 304 (745)
Q Consensus 272 l~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v 304 (745)
|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 160 L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 160 LHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999987 78999999999999885 6788887
No 166
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.89 E-value=1.3e-21 Score=180.65 Aligned_cols=179 Identities=22% Similarity=0.364 Sum_probs=145.2
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecC-CCeEEEEe-CCEeccCCCCCCcee---ecCceEEEccCCCCCCEEEEEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLP-EPEIHWVH-NGKPISQAPPNPRRK---VGPNRITIENLRKSDTGNYGCNA 199 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~-~g~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~~ 199 (745)
++.+...|....+.+|+++.|.|.+.+.+ .+.+.|++ +|..+.......... .....|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 45677788888999999999999999876 78999999 888776432211111 23468999999999999999999
Q ss_pred EeCC-ceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEcc---CceEEEeecCcEEEc
Q psy11701 200 TNSL-GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKIT 275 (745)
Q Consensus 200 ~~~~-g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~ 275 (745)
.+.. +.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+. ..++....++.|.|.
T Consensus 82 ~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQ-KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 160 (191)
T ss_dssp EETTTEEEEEEEEEEEEC-CSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEET
T ss_pred EcCCCcceEEEEEEEeec-CceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEEC
Confidence 9998 4556667777774 7888888888889999999999999999999999999998874 346666677799999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 276 DVAFADSGEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 276 ~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
++...|+|.|+|.|.|..+.......+.|
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 99999999999999998865544444443
No 167
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=182.00 Aligned_cols=183 Identities=26% Similarity=0.412 Sum_probs=147.6
Q ss_pred EEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeec--CceEEEccCCCCCCEEEEEEE
Q psy11701 122 VLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNA 199 (745)
Q Consensus 122 V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~ 199 (745)
+..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+...... ..... ...|.|.++..+|+|.|+|.+
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKY-KMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSE-EEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccE-EEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 345788888899999999999999999999999999999999988643211 11111 227999999999999999999
Q ss_pred EeCCceEEEEEEEEEeecCCeeee---CCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc-eEEEeec---CcE
Q psy11701 200 TNSLGYVYKDVYVNVLAHAPEITE---APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILET---GDL 272 (745)
Q Consensus 200 ~~~~g~~~~~~~l~v~~~~p~~~~---~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~---~~l 272 (745)
.|..+.....+.+.|.. +|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ++..... +.|
T Consensus 83 ~n~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQA-TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHL 161 (197)
T ss_dssp ECSSCEEEEEEEEEEEE-EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEE
T ss_pred ECCCCceeEEEEEEEEc-CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEE
Confidence 99999888888888875 333332 234456789999999999999999999999999988543 4444333 469
Q ss_pred EEcccCC-CCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 273 KITDVAF-ADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 273 ~i~~~~~-~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
.|.++.. +|+|.|+|.|.|..|.....+.|.|.+
T Consensus 162 ~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 162 VMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9999985 899999999999999998888888864
No 168
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.88 E-value=2.2e-22 Score=210.13 Aligned_cols=219 Identities=17% Similarity=0.234 Sum_probs=151.2
Q ss_pred cceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCC-ceeeEEEEEEEcCCc--cc-
Q psy11701 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG-VLMGYKIKYQSVKGT--KV- 549 (745)
Q Consensus 474 ~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g-~i~~Y~v~~~~~~~~--~~- 549 (745)
....+.|.|.|..|.++........+ .+|++|.++.. .++.++|.|+|++|.+.+| +|.+|.|+|+..... .+
T Consensus 306 ~~Gs~~C~C~ng~~ra~~d~~~~~ct--~pPsaP~nl~~-~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~ 382 (536)
T 3fl7_A 306 PEGATSCECEEGFFRAPQDPASMPCT--RPPSAPHYLTA-VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECG 382 (536)
T ss_dssp CTTCSSCEECTTCBCCTTCCTTSCCB--CCCCCBSCEEE-ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEE
T ss_pred CCCccEEEEeccccccCCCccccccc--cCCCcccceEE-EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCccc
Confidence 34556788999998876544332222 47899999954 6889999999999988777 799999999974321 11
Q ss_pred --CCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCC---CCcceeeecccC-CCCCCCCCCCCCcceeEEEe
Q psy11701 550 --GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFYVPFK-NPDNVEGRGSTPNNLVISWT 623 (745)
Q Consensus 550 --~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g---~~S~~~~~~~~~-~~~~~~~~~~~p~~~~v~W~ 623 (745)
...............++++|.+|.|++.|.|+|.|.|..|.+ +.+..+...+.. .|..+......+++|.|+|+
T Consensus 383 ~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~tSV~LsW~ 462 (536)
T 3fl7_A 383 PCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWS 462 (536)
T ss_dssp ECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEEECCC-CCEEEEE
T ss_pred ccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCceeeccCCeEEEEEE
Confidence 000000000113456899999999999999999999999984 344444333222 22222233456789999999
Q ss_pred ecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcE
Q psy11701 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTT 703 (745)
Q Consensus 624 ~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~ 703 (745)
+| ...+|.|.+|.|.|+..+.. . . ....++..++
T Consensus 463 pP--~~~ng~I~~Y~V~y~~~~~~--~-~-----------------------------------------~~~v~~~~ts 496 (536)
T 3fl7_A 463 IP--PPQQSRVWKYEVTYRKKGDS--N-S-----------------------------------------YNVRRTEGFS 496 (536)
T ss_dssp CC--TTTTTTCSEEEEEEEEC--C--C-C-----------------------------------------CEEEEESSSE
T ss_pred CC--cCCCCcccEEEEEEEECCCC--c-e-----------------------------------------EEEEcCCCCE
Confidence 76 45788999999999865221 0 0 0011457789
Q ss_pred EEecccccCCcceeEEEEecCcccCCCCcceEEeCCCC
Q psy11701 704 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741 (745)
Q Consensus 704 ~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~~ 741 (745)
+.|.+|+|++.|.|+|+|.|.+|.|++|+++.|+|..+
T Consensus 497 ~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 497 VTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC-
T ss_pred EEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99999999999999999999999999999999999643
No 169
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.9e-21 Score=179.30 Aligned_cols=180 Identities=24% Similarity=0.459 Sum_probs=140.2
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
+|.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+............++.|.|.+++.+|+|.|+|.+.+..+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 81 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 81 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC
Confidence 57788888999999999999999999989999999999988765433333344567899999999999999999998875
Q ss_pred eEE--EEEEEEEeecCCeeeeCCC--ceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc-eEEEe-ecCcEEEcccC
Q psy11701 205 YVY--KDVYVNVLAHAPEITEAPK--DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTIL-ETGDLKITDVA 278 (745)
Q Consensus 205 ~~~--~~~~l~v~~~~p~~~~~~~--~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~-~~~~l~i~~~~ 278 (745)
... ..+.+.+.. +|.+...+. ...+.+|+.++|.|.+.+.|.+.+.|++++..+... ++... ..+.|.|.++.
T Consensus 82 ~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 160 (189)
T 2v5t_A 82 GEIDFRDIIVIVNV-PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 160 (189)
T ss_dssp TEEEEEEEEEEEEE-EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCC
T ss_pred CceEEEEEEEEecC-CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCC
Confidence 433 345555554 566655444 345678999999999999999999999999987643 33332 24579999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 279 FADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 279 ~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 161 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 161 NSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 999999999999999998888888775
No 170
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.88 E-value=4e-21 Score=200.26 Aligned_cols=311 Identities=13% Similarity=0.186 Sum_probs=190.9
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCc----ceeeeeEEEEEEeccC
Q psy11701 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL----RGHFRGYKVQTWTEKD 447 (745)
Q Consensus 372 ~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~----~~~i~~y~i~~~~~~~ 447 (745)
...+.+.|...+.|..|. ...+.+.-...|.||.++.+.. .+ ..+.|+|+++..... .+..+.|+|+|+....
T Consensus 80 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~v~p~pP~~l~v~~-~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~~ 156 (419)
T 2gys_A 80 VVTDVDYFSFQPDRPLGT-RLTVTLTQHVQPPEPRDLQIST-DQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD 156 (419)
T ss_dssp CTTCEEEEEEEESSCCCE-EEEEEGGGSBCCCCCEEEEEEE-ET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETTS
T ss_pred eeecccEEEEeCCccccc-cceEcHHHcccCCCCCceEEEe-cC-CeEEEEECCCccccccchhccCceEEEEEEccCCC
Confidence 334455666666566553 2222222235789999999876 44 699999999765432 1356889999998763
Q ss_pred CCCceeEEEEccCceeEEEec--ccccCcceeEEEEEecCC---CCC---CCCcceEEeCCCCCCCCCCceeEEEcCCce
Q psy11701 448 GEGSIRELIVNKGESTTTEVD--KFVPASKNFARVLAFNGA---YNG---PPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519 (745)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~i~--~L~~~~~Y~~~V~a~n~~---G~g---~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~ 519 (745)
...... . + ......+.+. +|.|++.|+|+|+|.+.. +.| ++|..+.+.+.++.|.+|.++.+...+.+.
T Consensus 157 ~w~~~~-~-~-~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~~ 233 (419)
T 2gys_A 157 SWEDAA-I-L-LSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAV 233 (419)
T ss_dssp CSTTCE-E-E-EESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSSE
T ss_pred Chhhee-e-e-cccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCceE
Confidence 222222 2 1 1223444555 899999999999999964 334 446778899998889999999999989999
Q ss_pred EEEEeeCCCCCCCceeeEEEEEEEcCCc------ccCCcccccccccCC------CcceeeecCCCCCccEEEEEEEEec
Q psy11701 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGT------KVGPLLERLPYISDP------TTTSAKLAGLEPSTKYRIHLAGYTK 587 (745)
Q Consensus 520 i~l~W~~p~~~~g~i~~Y~v~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~~l~~L~p~t~Y~~~V~a~n~ 587 (745)
|.+.|+++....+. .+|.|+|+..... ......... .... ....+.+.+|.+++.|.|+|.|.+.
T Consensus 234 l~c~W~~~~~~~~~-~~y~l~y~~~~~~g~~~~~~~~~C~~~~--~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~ 310 (419)
T 2gys_A 234 LSCSWEVRKEVASS-VSFGLFYKPSPDAGSAVLLREEECSPVL--REGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRA 310 (419)
T ss_dssp EEEEEEEEHHHHTT-CCEEEEEECC-----CCCCCCEECCCEE--EECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCC
T ss_pred EEeEEECCCCCCCc-eeEEEEEEecCccccccCcccccCCCcc--cccCCCcceeEEeEEECccCCccCEEEEEEEEccC
Confidence 99999986322222 5699999865321 011100000 0011 1235778899999999999999754
Q ss_pred CCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEecc
Q psy11701 588 AGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667 (745)
Q Consensus 588 ~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (745)
.|.-.++.. +. ..++.+.+.. ..+.+.|+|++|.....+ .+..|.|+|+..+. .|...
T Consensus 311 ~~~~~~~~~---v~-p~PP~l~v~~-~~~~l~l~W~~P~~~~~~-~~l~Yev~y~~~~~--~w~~~-------------- 368 (419)
T 2gys_A 311 EKHIKSSVN---IQ-MAPPSLQVTK-DGDSYSLRWETMKMRYEH-IDHTFEIQYRKDTA--TWKDS-------------- 368 (419)
T ss_dssp CEEEEGGGS---BC-CCCCEEEEC----CCCEEEEEC---------CEEEEEEEECSSS--CSTTS--------------
T ss_pred CccccceEE---EE-ECCCCeEEEE-eCCeEEEEECCCcccccc-cceEEEEEEEcCCC--Cccee--------------
Confidence 442111111 11 1111122222 257889999887542222 45799999986521 11110
Q ss_pred CCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcc-----cCCCCcceEEeCC
Q psy11701 668 QPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY-----NGPPSEIISFVTP 739 (745)
Q Consensus 668 l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G-----~g~~s~~~~~~t~ 739 (745)
....+ . +.+++.|.+|+|++.|.|+|+|.+.+| .|.||+++.|+|+
T Consensus 369 ------------------------~~~~~-~-~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t~ 419 (419)
T 2gys_A 369 ------------------------KTETL-Q-NAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDTE 419 (419)
T ss_dssp ------------------------CEEEE-E-SCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC-
T ss_pred ------------------------ecccc-c-cccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeCC
Confidence 00011 1 567899999999999999999999763 3488899999874
No 171
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.88 E-value=9.4e-22 Score=195.04 Aligned_cols=217 Identities=16% Similarity=0.210 Sum_probs=164.1
Q ss_pred EecCCCCCCEEEEEEEEeCCceEEEEEEEEEec---cCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEe
Q psy11701 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQV---PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444 (745)
Q Consensus 368 i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~---pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~ 444 (745)
+..+.....+.+++.|.|..|.+.......... ++.+|.++.+.. . ..++.|+|+++.. .+.+|.|+|+.
T Consensus 65 ~~~l~p~t~Y~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~~~-~-~~si~l~W~~p~~-----~i~~Y~v~~~~ 137 (290)
T 3l5i_A 65 LTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFP-K-DNMLWVEWTTPRE-----SVKKYILEWCV 137 (290)
T ss_dssp EEEEECSSCEEEEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEEEE-E-TTEEEEEEECCSS-----CCCEEEEEEEE
T ss_pred EEEEcCCceEEEEEEEEcCCCCCCCceEEeecccccCCCccceeEEEe-C-CCeEEEEEeCCCC-----CCCcEEEEEEE
Confidence 344556788999999999998765443222222 455566676655 3 4799999998532 68899999887
Q ss_pred ccCCCCc-eeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEE
Q psy11701 445 EKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523 (745)
Q Consensus 445 ~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~ 523 (745)
....... .....+.......+.+.+|.+++.|.|+|.|.|..|.|.+ ..+.+.|.+.+|..|+++.+...+.++|.|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~ 216 (290)
T 3l5i_A 138 LSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLE 216 (290)
T ss_dssp ECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEEEESSCCCCSSCCCEEEEEECSSCEEEE
T ss_pred CCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCccccc-EEEEeEccccCCCCCCeeeEeeccCCEEEEE
Confidence 6654321 1122222566778889999999999999999999999984 5566778888998878999988999999999
Q ss_pred eeCC--CCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 524 WVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 524 W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
|+++ .+.+|.|.+|.|+|+..++.... .. + ....++++|.+|.|++.|.|+|.|.|.+| |++|..+.+.
T Consensus 217 W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~-~~-----~-~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~ 287 (290)
T 3l5i_A 217 WDQLPVDVQNGFIRNYTIFYRTIIGNETA-VN-----V-DSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFT 287 (290)
T ss_dssp ECCCCHHHHSSCCCEEEEEEEETTSCCEE-EE-----E-ETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEE
T ss_pred EcCCChhccCCEEEEEEEEEEeCCCCeEE-EE-----e-CCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEee
Confidence 9954 35688999999999987543211 11 2 55678999999999999999999999999 8777665444
No 172
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.88 E-value=2.2e-22 Score=182.86 Aligned_cols=165 Identities=16% Similarity=0.215 Sum_probs=129.4
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCC-eeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLP-QTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~-~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
++.+...|....+.+|++++|.|.+.+.+.+ .+.|+|++..+. ..+.+|.|.+++.+|+|.|+|.+.+..+
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 75 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSE--------ETNSSLNIVNAKFEDSGEYKCQHQQVNE 75 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECS--------CCSSEEEECSCCGGGCEEEEEECTTSSC
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECC--------CCceEEEEeccceecCEEEEEEcCCccc
Confidence 4455677888899999999999999888775 799999999886 3466899999999999999999987554
Q ss_pred eeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCC
Q psy11701 112 EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190 (745)
Q Consensus 112 ~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~ 190 (745)
. ..+.|.|..++.+... ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+... ...+.|.|.++..+
T Consensus 76 s---~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~~~L~i~~v~~~ 144 (176)
T 1f2q_A 76 S---EPVYLEVFSDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-------YENHNISITNATVE 144 (176)
T ss_dssp C---CCEEEEEECSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-------CCSSEEEESSCCGG
T ss_pred c---ccEEEEEeCcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-------cCCCeEEECCCCcc
Confidence 3 3467777755544433 445788999999999994 5666799999999988522 23578999999999
Q ss_pred CCEEEEEEEEeCCce-EEEEEEEEEee
Q psy11701 191 DTGNYGCNATNSLGY-VYKDVYVNVLA 216 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~-~~~~~~l~v~~ 216 (745)
|+|.|+|.|.|..+. ....+.|.|..
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEec
Confidence 999999999997544 33447777764
No 173
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.88 E-value=6.7e-22 Score=186.17 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=144.9
Q ss_pred CCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEE--E---------ccCceeEEEeccc
Q psy11701 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI--V---------NKGESTTTEVDKF 470 (745)
Q Consensus 402 p~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~--~---------~~~~~~~~~i~~L 470 (745)
+.+|.++.+.. .+.+++.|+|+++.. .++.+.+|.|+|+..+.. ..+..+. + .......+++.+|
T Consensus 2 ~~pP~~~~~~~-~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 77 (214)
T 2ibg_A 2 TYPPTPPNVTR-LSDESVMLRWMVPRN--DGLPIVIFKVQYRMVGKR-KNWQTTNDNIPYGKPKWNSELGKSFTASVTDL 77 (214)
T ss_dssp CCCCCCCEEEE-EETTEEEEEEEEECC--SSCCEEEEEEEEEESSSS-CCCEECSCCEECCSSSCSSSSEEEEEEEECSC
T ss_pred CCCCCCCEeeE-ecCCEEEEEEECCCC--CCCCceEEEEEEEECCCC-CcCcccccccCccccccccccCcceeEEecCC
Confidence 35777777777 789999999998643 357899999998875431 2222211 0 0135678899999
Q ss_pred ccCcceeEEEEEecCCCCCCCCc-ceEEeCCCC----CCCCCCceeEEEcCCceEEEEeeCCC-CCCCceeeEEEEEEEc
Q psy11701 471 VPASKNFARVLAFNGAYNGPPSE-IISFVTPEG----VPGTVQSLEAIPLGSSAFYLKWVKPE-QPNGVLMGYKIKYQSV 544 (745)
Q Consensus 471 ~~~~~Y~~~V~a~n~~G~g~~S~-~~~~~t~~~----~P~~p~~~~~~~~~~~~i~l~W~~p~-~~~g~i~~Y~v~~~~~ 544 (745)
.+++.|.|+|.|.|..|.|..+. ...+.+... +|.+|.++.+...+.++|.|+|++|. +.++.|.+|.|+|+..
T Consensus 78 ~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~ 157 (214)
T 2ibg_A 78 KPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPS 157 (214)
T ss_dssp CTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEET
T ss_pred cCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEEC
Confidence 99999999999999999877665 333444333 45678899998889999999999997 5678999999999987
Q ss_pred CC-cccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 545 KG-TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 545 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
+. ..+.... +......+++|.+|.|++.|.|+|.|+|..|.|++|..+...+
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 210 (214)
T 2ibg_A 158 SSAGEYFKAT-----IEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 210 (214)
T ss_dssp TCCSCCEEEE-----EECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred CCCcceEEee-----ccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEe
Confidence 65 2222211 2244468999999999999999999999999999998775553
No 174
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.88 E-value=1.7e-22 Score=189.82 Aligned_cols=180 Identities=19% Similarity=0.202 Sum_probs=131.6
Q ss_pred eccceeEecC--CcEEEEEEEeecCCCeeEEEE---CCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeee
Q psy11701 39 TRKKEVALRN--KKVELFCIFGGTPLPQTIWSK---DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113 (745)
Q Consensus 39 ~~~~~~v~~G--~~~~l~C~~~g~p~~~v~W~~---~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 113 (745)
.|..+.+.+| ++++|.|.+.+ |.+.++|++ |+..+..+.++..+. ...|.|.+++.+|+|.|+|.|.+..+..
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~-~~~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDS-KKGFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEET-TTEEEEEGGGTTTCSEEEEEEC----CE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccC-CccEEEccCChhcCceEEEEEEECCeeE
Confidence 4578899999 99999999986 778999988 477777665555433 4579999999999999999998854444
Q ss_pred EEEEEEEEEEe--cCeEEecCce-eEeeCCCeEEEEEEEeecCC--CeEEEEeCCEeccCCCC-CCc--------eeecC
Q psy11701 114 KSYSIDLSVLA--APYFTVEPEF-INAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAPP-NPR--------RKVGP 179 (745)
Q Consensus 114 ~~~~~~l~V~~--~p~~~~~~~~-~~v~~G~~~~l~C~~~~~p~--~~v~W~~~g~~~~~~~~-~~~--------~~~~~ 179 (745)
.+..+.|.|.. +|.+...+.. ..+.+|++++|.|.+.+.|. +.+.|+++|..+..... ... .....
T Consensus 91 ~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (213)
T 2x1w_L 91 QSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 170 (213)
T ss_dssp ECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEE
T ss_pred EEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeee
Confidence 43446677743 4455555544 48999999999999998554 58999999876432110 000 01223
Q ss_pred ceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCee
Q psy11701 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221 (745)
Q Consensus 180 ~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~ 221 (745)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. +|.|
T Consensus 171 ~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-~p~i 211 (213)
T 2x1w_L 171 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE-DPIE 211 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-----
T ss_pred EEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEec-cccc
Confidence 5799999999999999999999999999899999985 4433
No 175
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=2.8e-21 Score=178.13 Aligned_cols=172 Identities=27% Similarity=0.480 Sum_probs=139.2
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe-CCEeccCCCCCCceee----cCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~-~g~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
+...|....+.+|+++.|.|.+.+.|. .+.|++ +|..+.... +... ....|.|.++..+|+|.|+|.+.+.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQ---RVVVQKEGVRSRLTIYNANIEDAGIYRCQATDA 80 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCS---SEEEEEETTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCc---eEEEECCCCeEEEEEccCCcccCeEEEEEEEeC
Confidence 456678889999999999999999877 999999 777665322 2222 1248999999999999999999998
Q ss_pred CceE-EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEcc---CceEEEeecCcEEEcccC
Q psy11701 203 LGYV-YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKITDVA 278 (745)
Q Consensus 203 ~g~~-~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~---~~~~~~~~~~~l~i~~~~ 278 (745)
.|.. ...+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+. ..++....++.|.|.++.
T Consensus 81 ~g~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 159 (189)
T 2v44_A 81 KGQTQEATVVLEIYQ-KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNIN 159 (189)
T ss_dssp TSCEEEEEEEEEEEC-CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCC
T ss_pred CCCcEEEEEEEEEec-CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcC
Confidence 8875 5567777764 6777777778889999999999999999999999999988764 567777777899999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 279 FADSGEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 279 ~~d~G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
.+|+|.|+|.|.|..+.......+.|
T Consensus 160 ~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 160 KSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999876544444433
No 176
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=8e-21 Score=203.44 Aligned_cols=273 Identities=15% Similarity=0.196 Sum_probs=172.4
Q ss_pred eceEEEEEEecccCCcccCCCCCeeEeeccceeEecCCcEEEEEEEeec-CCC-eeEEEECCEecCC-CCCeEeccCC--
Q psy11701 12 GNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT-PLP-QTIWSKDGVPINP-SDRISQGNYG-- 86 (745)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~v~W~~~~~~i~~-~~~~~~~~~~-- 86 (745)
+..+.|+|... ...+|.++...+......+|+.++|.|.+.|. |.+ +|.|++++..... .........+
T Consensus 120 ~~~~~L~V~~~------~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~ 193 (512)
T 1zvo_C 120 GQGTTVHVSSA------PTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYY 193 (512)
T ss_pred cCceEEEeccc------CCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCE
Confidence 45577777732 22356555444433212357999999999887 765 8999997643210 0000111111
Q ss_pred ---cEEEEccCCCCCCEEEEEEEEeCCeeeEEEE----------EEEEEEe-----------------------------
Q psy11701 87 ---KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----------IDLSVLA----------------------------- 124 (745)
Q Consensus 87 ---~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~----------~~l~V~~----------------------------- 124 (745)
+.|.|.....+ .|.|+|.|.+..+...... ..|.+..
T Consensus 194 ~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~ 272 (512)
T 1zvo_C 194 MTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKK 272 (512)
T ss_pred EEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCccccccee
Confidence 35889888777 8999999999876544221 1233332
Q ss_pred -----------------------cCeEE-ecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEeccCCCCCCce-e-
Q psy11701 125 -----------------------APYFT-VEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPISQAPPNPRR-K- 176 (745)
Q Consensus 125 -----------------------~p~~~-~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~~~~~~~~~-~- 176 (745)
+|.+. ..|....+.+|+.++|.|.+.|. |. ..|+|+|+|..+......... .
T Consensus 273 ~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~ 352 (512)
T 1zvo_C 273 KEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERH 352 (512)
T ss_pred ccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecC
Confidence 23332 23344456789999999999885 42 499999999986521111111 1
Q ss_pred -----ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe-----ecCCeeeeCCCceEEecCceEE-EEEEEeec
Q psy11701 177 -----VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL-----AHAPEITEAPKDEYTVDGKTVV-LTCRVFGA 245 (745)
Q Consensus 177 -----~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~-----~~~p~~~~~~~~~~v~~g~~~~-l~C~~~~~ 245 (745)
...+.|.|..+..+|+|.|+|.|.|..+... ...+... ..+|.+...+... .|+.++ |.|.+.+.
T Consensus 353 ~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~ 428 (512)
T 1zvo_C 353 SNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGF 428 (512)
T ss_pred CCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeee
Confidence 1124699999999999999999999876543 2222221 1345554443332 789999 99999986
Q ss_pred CC--CeEEEeeCCEEccCceEE-----EeecC-------cEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 246 PK--PEVNWIHNQKELTGGRYT-----ILETG-------DLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 246 p~--~~i~W~~~~~~~~~~~~~-----~~~~~-------~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
++ ..+.|+++|..+....+. ...++ .|.|.....+|.|.|+|.|.|....
T Consensus 429 ~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 429 SPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSR 492 (512)
T ss_pred CCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCC
Confidence 44 368999999888654322 22333 3666666667799999999987644
No 177
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.88 E-value=6e-22 Score=186.89 Aligned_cols=177 Identities=18% Similarity=0.251 Sum_probs=139.9
Q ss_pred EeeccceeEecCCcEEEEEEEeecC----CCeeEEEE----------------CCEecCC-----CCCeEecc-----CC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTP----LPQTIWSK----------------DGVPINP-----SDRISQGN-----YG 86 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p----~~~v~W~~----------------~~~~i~~-----~~~~~~~~-----~~ 86 (745)
..++..+.+.+|++++|.|.+.+.+ .+.+.|+| ++..+.. ..|+.+.. ..
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 3455677899999999999998876 46999998 5555442 34565533 45
Q ss_pred cEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEe
Q psy11701 87 KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKP 165 (745)
Q Consensus 87 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~ 165 (745)
.+|.|.+++.+|+|.|+|.+.+..|... ..+.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~ 162 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVAN-KKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDS 162 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTT
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccc-cEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCC
Confidence 6899999999999999999999887664 7789999999887666666668899999999999 8899999999995432
Q ss_pred ccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 166 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
.... .........+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 163 ~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 163 QTMP-TPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp CCCC-GGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CccC-ccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 2211 111223345699999999999999999999999999888888876
No 178
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.88 E-value=1.4e-21 Score=184.75 Aligned_cols=183 Identities=28% Similarity=0.563 Sum_probs=149.2
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCC-CceeecCceE----EEccCCCCCCEEEEE
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRI----TIENLRKSDTGNYGC 197 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~-~~~~~~~~~L----~i~~v~~~d~G~Y~C 197 (745)
..+|.|...|....+.+|+++.|.|.+.+.|.+.+.|+++|..+...... .+....++.+ .|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 35788899999999999999999999999899999999999988754322 2233334444 688899999999999
Q ss_pred EEEeCCceEE-EEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEcc---------CceEEE
Q psy11701 198 NATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELT---------GGRYTI 266 (745)
Q Consensus 198 ~~~~~~g~~~-~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~---------~~~~~~ 266 (745)
.+.|..|... ..+.+.|...+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+. ..++..
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 166 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE
T ss_pred EEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe
Confidence 9999988764 34677776667777778888889999999999998 889999999999998875 334555
Q ss_pred eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 267 ~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
...+.|.|.++..+|.|.|+|.|.|..|.......+.+.
T Consensus 167 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 167 VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp ETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 566789999999999999999999999987765444443
No 179
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.88 E-value=1.8e-21 Score=180.53 Aligned_cols=178 Identities=16% Similarity=0.218 Sum_probs=129.5
Q ss_pred Eeecccee-EecCCcEEEEEEEeecCCCeeEEEECC-EecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeE
Q psy11701 37 YVTRKKEV-ALRNKKVELFCIFGGTPLPQTIWSKDG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114 (745)
Q Consensus 37 ~~~~~~~~-v~~G~~~~l~C~~~g~p~~~v~W~~~~-~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~ 114 (745)
.+.|.+.. +.+|++++|.|.+.|.|.|.+.|+++. .++. .+.........|.|.+++.+|+|.|+|.|.+..|..
T Consensus 4 ~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~- 80 (202)
T 1vca_A 4 ETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL- 80 (202)
T ss_dssp EEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEE-
T ss_pred EECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceE-
Confidence 34455544 459999999999999999999999842 2221 222323344579999999999999999999987764
Q ss_pred EEEEEEEEEecCeE-EecCceeEeeCCCeEEEEEEEeec-CC--CeEEEEeCCEeccCCCCCCc-----eeecCceEEEc
Q psy11701 115 SYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGL-PE--PEIHWVHNGKPISQAPPNPR-----RKVGPNRITIE 185 (745)
Q Consensus 115 ~~~~~l~V~~~p~~-~~~~~~~~v~~G~~~~l~C~~~~~-p~--~~v~W~~~g~~~~~~~~~~~-----~~~~~~~L~i~ 185 (745)
+..+.|.|..+|.. ...+. ..+.+|+.++|.|.+.+. |. +.++|+|++..+........ .......|.|.
T Consensus 81 ~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~ 159 (202)
T 1vca_A 81 EKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFT 159 (202)
T ss_dssp EEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEEC
T ss_pred eeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEE
Confidence 47789999887753 33333 668999999999999875 43 37999999998753221110 01223457888
Q ss_pred cCCCCCCEEEEEEEEeCCce-------EEEEEEEEEeecCC
Q psy11701 186 NLRKSDTGNYGCNATNSLGY-------VYKDVYVNVLAHAP 219 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~-------~~~~~~l~v~~~~p 219 (745)
.+..+|+|.|+|+|.|..+. ......|.|.. +|
T Consensus 160 ~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y-~P 199 (202)
T 1vca_A 160 PVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYI-SP 199 (202)
T ss_dssp CCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEEC-CC
T ss_pred eeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEec-CC
Confidence 88889999999999998765 34567777764 44
No 180
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.88 E-value=5.5e-21 Score=191.15 Aligned_cols=291 Identities=13% Similarity=0.086 Sum_probs=172.2
Q ss_pred CCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEE
Q psy11701 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481 (745)
Q Consensus 402 p~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~ 481 (745)
..+|.++++.. ....++.|+|+++. ...++.+.+|++.+... . ..... ...+.+.+|.++..|.|+|+
T Consensus 4 ~~pP~nl~~~~-~~~~~v~l~W~pP~-~~~~~~~~~Y~v~~~~~---~---~~~~~----~~~~~~~~~~~~~~y~~~V~ 71 (314)
T 3bpo_C 4 QPPVTNLSVSV-ENLCTVIWTWNPPE-GASSNCSLWYFSHFGDK---Q---DKKIA----PETRRSIEVPLNERICLQVG 71 (314)
T ss_dssp CCCCEEEEEEE-ETTTEEEEEEECCS-SCCCSSCCCEEECCC-----C---CCEEE----SSSEEEEECCCSSCEEEEEE
T ss_pred CCCCcceEEEe-CCceEEEEEEcCCC-CCCCCceEEEEEEeccc---C---ceEec----cccEEEEEEcCCCcEEEEEE
Confidence 47889999976 78899999999953 33356677899866331 1 11111 22345677899999999999
Q ss_pred Eec-CCCCCCCCcceEEe--CCC-CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccc
Q psy11701 482 AFN-GAYNGPPSEIISFV--TPE-GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557 (745)
Q Consensus 482 a~n-~~G~g~~S~~~~~~--t~~-~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~ 557 (745)
|.+ ..|.|.++..+... +.+ .+|++|.++.+...+.+++.++|++|.+. +.+++|.|+|+..+...+.......
T Consensus 72 a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~~~~~Y~l~y~~~~~~~~~~C~~~~- 149 (314)
T 3bpo_C 72 SQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-SPDTNYTLYYWHRSLEKIHQCENIF- 149 (314)
T ss_dssp ECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEEEEEESSCSSCEECCCEE-
T ss_pred EEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-CCCccEEEEEEeCCCCccccCcCee-
Confidence 964 56677777766522 333 45668999999998899999999998765 4589999999875432221211100
Q ss_pred cccCCCcceeeecCCC----CCccEEEEEEEEecCCCCCCcceeeeccc----CCCCCCCCCCCCCcceeEEEeecCccc
Q psy11701 558 YISDPTTTSAKLAGLE----PSTKYRIHLAGYTKAGDGAESKYLFYVPF----KNPDNVEGRGSTPNNLVISWTAMPEIE 629 (745)
Q Consensus 558 ~~~~~~~~~~~l~~L~----p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~----~~~~~~~~~~~~p~~~~v~W~~~~~~~ 629 (745)
. .+....+.+..+. +++.|.|+|.|.|..|.+.++........ .+|.++.+. ...+++.|+|++|..
T Consensus 150 -~-~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~-- 224 (314)
T 3bpo_C 150 -R-EGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQN-- 224 (314)
T ss_dssp -E-ETTEEEEEEECCC--------CCEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTT--
T ss_pred -c-CCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecccEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCc--
Confidence 1 2334566666665 47899999999999999877643222111 111111121 234677888876653
Q ss_pred cCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEeccc
Q psy11701 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 709 (745)
Q Consensus 630 ~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 709 (745)
.++.+..|.|+|++.+.. .|.. +.+ .........+.......+++.|.+|
T Consensus 225 ~~~~~l~Yev~y~~~~~~-~w~~---------------------~~~--------~~~~c~~~~~~~~~~~~~~~~l~~L 274 (314)
T 3bpo_C 225 FISRCLFYEVEVNNSQTE-THNV---------------------FYV--------QEAKCENPEFERNVENTSCFMVPGV 274 (314)
T ss_dssp CCGGGEEEEEEEEC--CC-CEEE---------------------EEE--------SCCCCCCTTSSCCCSSEEEEEEESC
T ss_pred cCCceEEEEEEEEECCCC-cceE---------------------Eec--------ccccccccccccccCCceEEEEccC
Confidence 333457788888754221 1100 000 0000000000000135677889999
Q ss_pred ccCCcceeEEEEecC------cc-cCCCCcceEEeCCCC
Q psy11701 710 VPASKNFARVLAFNG------AY-NGPPSEIISFVTPEG 741 (745)
Q Consensus 710 ~p~~~Y~~~v~A~~~------~G-~g~~s~~~~~~t~~~ 741 (745)
+|++.|.|+|+|.+. .| .|.||+++.|.+.++
T Consensus 275 ~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~~ 313 (314)
T 3bpo_C 275 LPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKRN 313 (314)
T ss_dssp CTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCCC
T ss_pred CCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccCC
Confidence 999999999999984 56 489999999987653
No 181
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=1.7e-21 Score=178.35 Aligned_cols=173 Identities=23% Similarity=0.443 Sum_probs=138.7
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeec----CceEEEccCCCCCCEEEEEEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG----PNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
+|.|...|....+.+|+++.|.|.+.+.|.+.+.|+|++..+...... ..... .+.|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQL-YIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEE-EEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCce-EEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 466778888899999999999999999899999999999988744211 11111 3689999999999999999999
Q ss_pred eCCceE-EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCC-eEEEeeCCEEccCceEEEeecCcEEEcccC
Q psy11701 201 NSLGYV-YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP-EVNWIHNQKELTGGRYTILETGDLKITDVA 278 (745)
Q Consensus 201 ~~~g~~-~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 278 (745)
+..+.. ...+.|.|.. +|.+...+....+.+|+.++|.|.+.+.|.+ .+.|++++..+..... ....|.|.++
T Consensus 81 ~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~---~~~~L~i~~~- 155 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEG-VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP---SPSVLNVTGV- 155 (182)
T ss_dssp SCTTCEECCCEEEEEEC-SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE---SSEEEEECCC-
T ss_pred cCCCcEEEEEEEEEEec-CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC---CceEEEEecc-
Confidence 987653 3457788874 7888888888899999999999999999998 9999999988865432 4557899888
Q ss_pred CCCCEEEEEEEEeCCceEE-EEEEEEE
Q psy11701 279 FADSGEYTCFARNKLGTAQ-GSGSLTV 304 (745)
Q Consensus 279 ~~d~G~Y~C~~~n~~g~~~-~~~~l~v 304 (745)
+|+|.|+|.|.|..|... ..+.|.|
T Consensus 156 -~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 156 -TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp -SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -ccCeEEEEEEECCCCCcccceEEEEe
Confidence 589999999999999874 3666665
No 182
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.88 E-value=2.7e-22 Score=185.79 Aligned_cols=169 Identities=14% Similarity=0.120 Sum_probs=115.8
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCC-eEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR-ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
|+.+...|. ..+.+|++++|.|.+.+.|. .+.|+|++..+....+ ......+..|.|.+++.+|+|.|+|.+.+..|
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 2d3v_A 5 KATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAG 82 (196)
T ss_dssp BCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCC
Confidence 344455565 48999999999999988766 9999999987753211 11223456899999999999999999998876
Q ss_pred eeE-EEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee---ecCceEEE
Q psy11701 112 EAK-SYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK---VGPNRITI 184 (745)
Q Consensus 112 ~~~-~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~---~~~~~L~i 184 (745)
... +..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+.| +.+.|+|+|..+.......... ...+.|.|
T Consensus 83 ~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I 160 (196)
T 2d3v_A 83 WSEPSDPLELVVTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPV 160 (196)
T ss_dssp ECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEEC
T ss_pred cCCcCccEEEEecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEe
Confidence 432 4557788876 566655543 5788999999999999988 8999999998764211110111 12268999
Q ss_pred ccCCCCCCEEEEEEEEeCCce
Q psy11701 185 ENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
.+++.+|+|.|+|.|.|..+.
T Consensus 161 ~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 161 GPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp CCCBTTBCEEEEEEEEETTEE
T ss_pred eecCcccCeeEEEEEEccCCC
Confidence 999999999999999997653
No 183
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.88 E-value=1.2e-22 Score=190.85 Aligned_cols=175 Identities=24% Similarity=0.388 Sum_probs=141.7
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEec------------CCCCCeEeccCCcEEEEccCCCCCCE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI------------NPSDRISQGNYGKSLIIKHVEFSDQG 100 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i------------~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (745)
+..+...+....+.+|++++|.|.+.+.|.+.+.|+|++..+ ....++.... .+|.|.+++.+|+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP--TGITFKSVTREDTG 81 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET--TEEECSCCCTTSCS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec--cEEEEeeCCHHHCc
Confidence 566778888999999999999999999899999999977552 1234455433 78999999999999
Q ss_pred EEEEEEEeCCee-eEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCC------
Q psy11701 101 SYTCEVSNGVGE-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPN------ 172 (745)
Q Consensus 101 ~Y~C~~~~~~g~-~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~------ 172 (745)
.|+|.+.+..|. ..+..+.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 82 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 161 (209)
T 1nbq_A 82 TYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSN 161 (209)
T ss_dssp EEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTT
T ss_pred EEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeec
Confidence 999999987652 2346688899989988777777778999999999997 88999999999999988754322
Q ss_pred Cce--eecCceEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 173 PRR--KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 173 ~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~ 209 (745)
..+ ....+.|.|.++..+|+|.|+|.|.|..|....+
T Consensus 162 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 200 (209)
T 1nbq_A 162 SSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTS 200 (209)
T ss_dssp CCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEEC
T ss_pred cceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccccc
Confidence 111 1245789999999999999999999999987443
No 184
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=1.6e-22 Score=186.70 Aligned_cols=164 Identities=22% Similarity=0.256 Sum_probs=126.7
Q ss_pred eeEeeCCCeEEEEEE---EeecCCCeEEEEeCCEeccCC--------------CCCCce----eecCceEEEccCCCCCC
Q psy11701 134 FINAAEEETVTFECK---ASGLPEPEIHWVHNGKPISQA--------------PPNPRR----KVGPNRITIENLRKSDT 192 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~---~~~~p~~~v~W~~~g~~~~~~--------------~~~~~~----~~~~~~L~i~~v~~~d~ 192 (745)
..++..|++++|.|. +.+.|.+.++|+|+|..+... ....+. ......|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 356889999999996 467789999999987533210 000111 11235799999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEcc-----CceEEEe
Q psy11701 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-----GGRYTIL 267 (745)
Q Consensus 193 G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~-----~~~~~~~ 267 (745)
|.|+|.|.|..|.....+.|.|.. ||.+...+....+.+|+.++|.|.+.|.|.|.|.|++++..+. ..++.+.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~-p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVK-PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEE-EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred eEEEEEEEcCCCcEEEEEEEEecC-CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 999999999999999899999874 7777777777788899999999999999999999998765442 3455666
Q ss_pred ecCcEEE---cccCCCCCEEEEEEEEeCCceEEE
Q psy11701 268 ETGDLKI---TDVAFADSGEYTCFARNKLGTAQG 298 (745)
Q Consensus 268 ~~~~l~i---~~~~~~d~G~Y~C~~~n~~g~~~~ 298 (745)
.+++|.| .++..+|+|.|+|.|.|..|....
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 6776555 588899999999999999998765
No 185
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.87 E-value=3.3e-22 Score=185.32 Aligned_cols=167 Identities=13% Similarity=0.189 Sum_probs=127.0
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEe-ccCCcEEEEccCCCCCCEEEEEEEEeCCe-
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ-GNYGKSLIIKHVEFSDQGSYTCEVSNGVG- 111 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g- 111 (745)
+.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|++..+....+... ...+..|.|.+++.+|+|.|+|.+.|..|
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGW 83 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcc
Confidence 344566666 8999999999999987 6789999999988764221111 13456899999999999999999999887
Q ss_pred eeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCc--eeecCceEEEcc
Q psy11701 112 EAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR--RKVGPNRITIEN 186 (745)
Q Consensus 112 ~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~--~~~~~~~L~i~~ 186 (745)
...+..+.|.|.. +|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|+|+|..+........ .....+.|.|.+
T Consensus 84 ~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (196)
T 3p2t_A 84 SQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSP 161 (196)
T ss_dssp BCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECS
T ss_pred cCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCC
Confidence 3344667788864 5666666654 6789999999999988 4468999999987653211111 122456899999
Q ss_pred CCCCCCEEEEEEEEeCCc
Q psy11701 187 LRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g 204 (745)
++.+|+|.|+|.|.|..+
T Consensus 162 v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 162 VTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CCGGGCEEEEEEEECGGG
T ss_pred CcccCCCeEEEEEEcCCC
Confidence 999999999999999875
No 186
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.87 E-value=2.5e-21 Score=177.54 Aligned_cols=179 Identities=21% Similarity=0.279 Sum_probs=131.4
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEE
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 581 (745)
.+|++|.++++...+.++|.|+|++|. +.|.+|.|+|+..++. .... .+ .....++.+.+|.|++.|.|+
T Consensus 5 t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~----~~~~--~~-~~~~~~~~i~~L~p~t~Y~~~ 74 (186)
T 1qr4_A 5 TDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGK----KNEM--EI-PVDSTSFILRGLDAGTEYTIS 74 (186)
T ss_dssp ---CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCC----EEEE--EE-CTTCSEEEEESCCSSCEEEEE
T ss_pred CCCcCCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCCCC----eeEE--EC-CCCCCEEEECCCCCCCEEEEE
Confidence 468889999999999999999999984 4789999999954322 1111 12 456689999999999999999
Q ss_pred EEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccc
Q psy11701 582 LAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661 (745)
Q Consensus 582 V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~ 661 (745)
|.|.|..|.|.+...........+.++.+.....+++.|+|+++. |.+.+|.|.|+..+++.
T Consensus 75 V~a~~~~~~s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~------------- 136 (186)
T 1qr4_A 75 LVAEKGRHKSKPTTIKGSTVVGSPKGISFSDITENSATVSWTPPR-----SRVDSYRVSYVPITGGT------------- 136 (186)
T ss_dssp EEEESSSCBCCCEEEEEECCCCCCSCEEEESCCSSCEEEEECCCS-----SCCSEEEEEEEETTCCC-------------
T ss_pred EEEEcCCccCCCEEEEEECCCCCCCccEEEEeCCCEEEEEEECCC-----CcccEEEEEEEeCCCCC-------------
Confidence 999998877776444333333334444455567799999998664 46799999998653211
Q ss_pred eEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeCC
Q psy11701 662 ELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 739 (745)
Q Consensus 662 ~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~ 739 (745)
.......+..+++.|.+|.|++.|.|+|+|.|+.|.|++.. ..++|.
T Consensus 137 ------------------------------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~-~~~~T~ 183 (186)
T 1qr4_A 137 ------------------------------PNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPIS-GILKTA 183 (186)
T ss_dssp ------------------------------CEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE-EEEEC-
T ss_pred ------------------------------ceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEE-EEEEec
Confidence 01112245778899999999999999999999999998865 566663
No 187
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.87 E-value=2.2e-21 Score=180.25 Aligned_cols=174 Identities=18% Similarity=0.313 Sum_probs=130.9
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEee-cCCCeEEEEeCCEeccCCCCCCceeec----CceEEEccCCCCCCEEEEEEEE
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASG-LPEPEIHWVHNGKPISQAPPNPRRKVG----PNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~g~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
|.|.. +....+.+|+.+.|.|.+.+ .|.+.++|+|||+.+..+... +.... ...|.|.+++.+|+|.|+|.|.
T Consensus 4 p~~~~-~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~-~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 4 PFTKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKY-KMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp --CCE-EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSC-EEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred Ceeec-CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCE-EEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 44433 33567899999999999964 799999999999999754322 22221 1269999999999999999999
Q ss_pred eCCceEEEEEEEEEe--------------------ecCCeeeeCCCceEEecCceEEEEEEEeec-CCCeEEEeeCCEEc
Q psy11701 201 NSLGYVYKDVYVNVL--------------------AHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHNQKEL 259 (745)
Q Consensus 201 ~~~g~~~~~~~l~v~--------------------~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~ 259 (745)
| |.......+.+. ..+|.+...+ ...+.+|+.+.|.|.+.+. |.+.+.|++++..+
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 9 444444333221 0256666555 4678899999999999998 89999999999988
Q ss_pred cCc-eEEEe-ecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 260 TGG-RYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 260 ~~~-~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
... ++... ....|.|.++..+|+|.|+|.|.|..|.....+.|.+
T Consensus 159 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 159 SVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 543 22211 1236999999999999999999999999988887764
No 188
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.87 E-value=1.3e-21 Score=181.88 Aligned_cols=184 Identities=14% Similarity=0.233 Sum_probs=135.0
Q ss_pred CCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEE
Q psy11701 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579 (745)
Q Consensus 500 ~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 579 (745)
..++| +|.++.+...+.++|.|+|++|. ++.|.+|.|+|+..+........ .......++.+.+|.|++.|.
T Consensus 20 ~~~~P-~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~~~i~~L~p~t~Y~ 91 (203)
T 2gee_A 20 HMEVP-QPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFED-----FVDSSVGYYTVTGLEPGIDYD 91 (203)
T ss_dssp SSCCC-CCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCCEEE-----EEETTCCEEEECSCCTTCEEE
T ss_pred cccCc-CCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCceeE-----EcCCCccEEEeCCCCCCCEEE
Confidence 34667 78999999999999999999986 46899999999987654322111 114567899999999999999
Q ss_pred EEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccc
Q psy11701 580 IHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659 (745)
Q Consensus 580 ~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~ 659 (745)
|+|.|.|..|.|.++..........+.++.+....++++.|+|++++ +|.|.+|.|.|+...+...
T Consensus 92 ~~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~~sv~l~W~~p~----~~~i~~Y~v~~~~~~~~~~---------- 157 (203)
T 2gee_A 92 ISVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEED---------- 157 (203)
T ss_dssp EEEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEETTEEEEEEECCS----SCCCSEEEEEEEETTCGGG----------
T ss_pred EEEEEEeCCCccccEeeeecCCCcCCCceEEEEcCCCEEEEEEcCCC----CCCccEEEEEEEECCCCCc----------
Confidence 99999999998887644322222222223333446688999999774 3578999999986422110
Q ss_pred cceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeC
Q psy11701 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738 (745)
Q Consensus 660 ~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t 738 (745)
......++..+++.|.+|.|++.|.|+|+|.|.+|.|+|+. ..++|
T Consensus 158 --------------------------------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~-~~~~T 203 (203)
T 2gee_A 158 --------------------------------VAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR-GRQKT 203 (203)
T ss_dssp --------------------------------CEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC
T ss_pred --------------------------------cEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCee-eEEcC
Confidence 01112256788999999999999999999999999998875 44444
No 189
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=1.8e-20 Score=173.21 Aligned_cols=178 Identities=34% Similarity=0.585 Sum_probs=141.7
Q ss_pred cCeEEecCc--eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 125 APYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 125 ~p~~~~~~~--~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
+|.+...+. ...+.+|+++.|.|.+.+.|.+.+.|++++..+.... ..........|.|.+++.+|+|.|+|.+.+.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE-KYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSS-SEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCc-cEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 566666543 5678899999999999999999999999999887432 1112234568999999999999999999999
Q ss_pred CceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeC--CEEcc------CceEEEee---cCc
Q psy11701 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELT------GGRYTILE---TGD 271 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~------~~~~~~~~---~~~ 271 (745)
.+.....+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|+++ +..+. ..++.... ...
T Consensus 81 ~~~~~~~~~l~V~~-~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 81 AGEDEKQAFLQVFV-QPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp TEEEEEEEEEEEEE-EEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred ccccceEEEEEEEc-cCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 99888888888875 55554433 45677899999999999999999999998 55443 23344332 247
Q ss_pred EEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 272 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999998888888763
No 190
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.87 E-value=5.4e-22 Score=186.22 Aligned_cols=164 Identities=13% Similarity=0.160 Sum_probs=123.0
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeE-eccCCc--EEEEccCCCCCCEEEEEEEEeCC
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGK--SLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~-~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
+.+...|. ..+.+|++|+|.|.+.+ +.+.+.|+|+|..+....+.. ....+. .|.|.+++.+|+|.|+|.+.+..
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 87 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGH 87 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETT
T ss_pred CEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCC
Confidence 33445555 58999999999999986 677999999987654222211 112234 89999999999999999999976
Q ss_pred ee-eEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEcc
Q psy11701 111 GE-AKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186 (745)
Q Consensus 111 g~-~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~ 186 (745)
|. ..+..+.|.|.. +|.+...| ...+.+|++++|.|...+.+.+.+.|+|+|..+... .......+.|.|.+
T Consensus 88 ~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~---~~~~~~~~~L~I~~ 163 (218)
T 1uct_A 88 YRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ---HQSGEHPANFSLGP 163 (218)
T ss_dssp TEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS---EEECSSSEEEECCS
T ss_pred CceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc---ccCCCccCEEEEcc
Confidence 43 334557788865 56676666 457899999999997777778899999999877531 11223467899999
Q ss_pred CCCCCCEEEEEEEEeCC
Q psy11701 187 LRKSDTGNYGCNATNSL 203 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~ 203 (745)
++.+|+|.|+|.|.|..
T Consensus 164 v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 164 VDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp CCGGGCEEEEEEEECTT
T ss_pred CCcccCEEEEEEEEcCC
Confidence 99999999999999863
No 191
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.87 E-value=7.2e-22 Score=183.32 Aligned_cols=168 Identities=15% Similarity=0.184 Sum_probs=121.5
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCC-eEeccCCcEEEEccCCCCCCEEEEEEEEeCC-
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR-ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV- 110 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~- 110 (745)
|+.+...|. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....+ ......+..|.|.+++.+|+|.|+|.+.+..
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 82 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTA 82 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTT
T ss_pred CCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCC
Confidence 444455565 48999999999999988776 7999999987742111 1112445689999999999999999999976
Q ss_pred ee-eEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee---cCceEE
Q psy11701 111 GE-AKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV---GPNRIT 183 (745)
Q Consensus 111 g~-~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~---~~~~L~ 183 (745)
|. ..+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. .+.+.|+|+|..+........... ..+.|.
T Consensus 83 g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~ 160 (198)
T 1ugn_A 83 GRSESSDPLELVVTGAYIKPTLSAQPS-PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFS 160 (198)
T ss_dssp EECCCCCCEEEEEECSSCCCEEEEESC-SEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEE
T ss_pred CcccCCccEEEEEcccccCCccccCCc-cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEE
Confidence 52 334567888876 456655543 578899999999999887 779999999987742211111111 236899
Q ss_pred EccCCCCCCEEEEEEEEeCCc
Q psy11701 184 IENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g 204 (745)
|.+++.+|+|.|+|.|.|..+
T Consensus 161 i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 161 VGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp ECCCCTTSCEEEEEEEECTTS
T ss_pred ecccCcccCeEEEEEEEeCCC
Confidence 999999999999999999865
No 192
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.87 E-value=3.2e-21 Score=174.23 Aligned_cols=163 Identities=20% Similarity=0.285 Sum_probs=128.8
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecC-CCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTP-LPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p-~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
+..+...|....+.+|++++|.|.+.+.| .+.+.|+|+|..+... ...+.|.+++.+|+|.|+|.+.+...
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~~~~~ 75 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTGQTSL 75 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC--------CSSEEEEECCGGGCEEEEEEETTSBC
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC--------ccceEEEecccccCeEEEEEEeCCCc
Confidence 34466777878899999999999998886 5699999999998733 34577889999999999999986433
Q ss_pred eeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCC
Q psy11701 112 EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190 (745)
Q Consensus 112 ~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~ 190 (745)
. ..+.|.|..+|.+...+ ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+.. ......|.|.++..+
T Consensus 76 s---~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-------~~~~~~L~i~~v~~~ 144 (170)
T 3ry4_A 76 S---DPVHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-------SHLDPTFSIPQANHS 144 (170)
T ss_dssp C---CCEEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-------ESSCCEEEESSCCGG
T ss_pred e---EeEEEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-------cCCCCeEEEEecccc
Confidence 3 44788888877555444 45688999999999994 556689999999988752 223568999999999
Q ss_pred CCEEEEEEEEeCCceE-EEEEEEEE
Q psy11701 191 DTGNYGCNATNSLGYV-YKDVYVNV 214 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~~-~~~~~l~v 214 (745)
|+|.|+|.|.|..|.. +..+.|.|
T Consensus 145 d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 145 HSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEEEEeCcCccccccEEEEE
Confidence 9999999999998863 23345444
No 193
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.87 E-value=9.1e-22 Score=185.34 Aligned_cols=197 Identities=19% Similarity=0.191 Sum_probs=146.9
Q ss_pred EeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEeccc-ccCcce
Q psy11701 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF-VPASKN 476 (745)
Q Consensus 398 v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~~~~~Y 476 (745)
+..||.+|.++.+.. .+.+++.|+|+++... +...+|.|+|+....... ..... ......++|.+| .+++.|
T Consensus 4 ~g~pP~~P~~l~~~~-~~~~sv~l~W~~p~~~---~~~~~Y~v~~~~~~~~~~--~~~~~-~~~~~~~~i~~L~~~~t~Y 76 (215)
T 1bqu_A 4 SGLPPEKPKNLSCIV-NEGKKMRCEWDGGRET---HLETNFTLKSEWATHKFA--DCKAK-RDTPTSCTVDYSTVYFVNI 76 (215)
T ss_dssp -CCCCCCCEEEEEEE-ETTSCCEEEEECCSCC---SSCCEEEEEEEETTEECC--CEECC-SSCTTEEECSSCCCTTSCE
T ss_pred cCCCCCCCEeeEeEE-CCCCcEEEEcCCCCCC---CCCceEEEEEEEcCCCcc--ccccc-cCCcceEEEcCCccccccE
Confidence 346899999999877 7778999999986443 234799998876543211 11112 445678999999 999999
Q ss_pred eEEEEEecCCCCCCCCcceEEeCC-CCCCCCCCceeEEEc--CCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcc
Q psy11701 477 FARVLAFNGAYNGPPSEIISFVTP-EGVPGTVQSLEAIPL--GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553 (745)
Q Consensus 477 ~~~V~a~n~~G~g~~S~~~~~~t~-~~~P~~p~~~~~~~~--~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~ 553 (745)
.|+|.|.|..|.+. +....+.+. ..+|.+|.++.+... +.+++.|+|++|...+|.|.+|.|+|+..+...|....
T Consensus 77 ~~~V~A~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~ 155 (215)
T 1bqu_A 77 EVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIP 155 (215)
T ss_dssp EEEEEEEETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECC
T ss_pred EEEEEEEecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEec
Confidence 99999999999886 444555433 347888989988765 67899999999987778999999999987644333221
Q ss_pred cccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCC
Q psy11701 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605 (745)
Q Consensus 554 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~ 605 (745)
.. .......++.|.+|.|++.|.|+|+|.|..|.|++|+++..+...+.
T Consensus 156 ~~---~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~ 204 (215)
T 1bqu_A 156 PE---DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 204 (215)
T ss_dssp GG---GGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEEC
T ss_pred cc---cccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccc
Confidence 10 01345689999999999999999999999999988776654444443
No 194
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.87 E-value=4.4e-22 Score=202.51 Aligned_cols=179 Identities=20% Similarity=0.252 Sum_probs=144.7
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCE-EEEEEEEeCCe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG-SYTCEVSNGVG 111 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~~~~~g 111 (745)
|+.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+............++|.|.+++.+|+| .|+|.|.+..|
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g 237 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVG 237 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCC
Confidence 55567788999999999999999999999999999999876543222222334568999999999999 99999999988
Q ss_pred eeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce--------eecCceEE
Q psy11701 112 EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR--------KVGPNRIT 183 (745)
Q Consensus 112 ~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~--------~~~~~~L~ 183 (745)
... ..+.|.|..+|.+ ....+.+|+.+.|.|.+.|.|.+.++|+|+|..+......... ....+.|.
T Consensus 238 ~~~-~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~ 312 (347)
T 2ifg_A 238 RAE-VSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLR 312 (347)
T ss_dssp ECC-EEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEE
T ss_pred CEE-EEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEE
Confidence 775 6788888888875 1223467999999999999999999999999998743321111 01245799
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 313 I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 313 LNQPTHVNNGNYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEECSCC
T ss_pred ECCCCcccCceEEEEEecCCCceeeEEEEEecC
Confidence 999999999999999999999998888888764
No 195
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.87 E-value=4.8e-21 Score=183.07 Aligned_cols=188 Identities=29% Similarity=0.512 Sum_probs=148.1
Q ss_pred EecCeEEecC----ceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCC--ceeecCceEEEccCCCCCCEEEE
Q psy11701 123 LAAPYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP--RRKVGPNRITIENLRKSDTGNYG 196 (745)
Q Consensus 123 ~~~p~~~~~~----~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~Y~ 196 (745)
..+|.|...+ ....+.+|+++.|.|.+.+.|.+.+.|+++|..+....... ........|.|.+++.+|+|.|+
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 3467775555 77889999999999999999999999999999887543332 22334568999999999999999
Q ss_pred EEEEeCCceEEEEEEEEEeec---CCeee-eCCCceEEecCceEEEEEEEeecCCCeEEEee----CCEEccCce---EE
Q psy11701 197 CNATNSLGYVYKDVYVNVLAH---APEIT-EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH----NQKELTGGR---YT 265 (745)
Q Consensus 197 C~~~~~~g~~~~~~~l~v~~~---~p~~~-~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~---~~ 265 (745)
|.+.|..|.....+.|.|... +|.+. ..+....+.+|+.++|.|.+.+.|.+.+.|++ ++..+.... ..
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 999999998888888888752 23332 23567788999999999999999999999999 666553221 11
Q ss_pred E--------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeeccee
Q psy11701 266 I--------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310 (745)
Q Consensus 266 ~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~ 310 (745)
. ...+.|.|.++...|+|.|+|.|.|..|.....+.|.|..+|..
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 1 11245999999999999999999999999999999999887644
No 196
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.87 E-value=8.2e-21 Score=179.14 Aligned_cols=171 Identities=22% Similarity=0.399 Sum_probs=143.6
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
..+.|...|....+.+|+++.|.|.+.+.|.+.+.|++++..+... ..+.|.|.+++.+|+|.|+|.+.+..
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~~n~~ 88 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG--------NTSELIFNAVHVKDAGFYVCRVNNNF 88 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC--------CSSEEEETTCCGGGCEEEEEEEECTT
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC--------CCCEEEEccCChhhCeEeEEEEEcCC
Confidence 3567888899999999999999999999999999999999988643 24689999999999999999999987
Q ss_pred ceE-EEEEEEEEeecC--------------CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEee
Q psy11701 204 GYV-YKDVYVNVLAHA--------------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268 (745)
Q Consensus 204 g~~-~~~~~l~v~~~~--------------p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 268 (745)
+.. ...+.|.|...+ |.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+... .
T Consensus 89 ~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~-----~ 163 (218)
T 3k0w_A 89 TFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----T 163 (218)
T ss_dssp CCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-----C
T ss_pred CCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-----C
Confidence 754 334677776532 67777888889999999999999999999999999999888654 2
Q ss_pred cCcEEEcccCCCCCEEEEEEEEeCCce-EEEEEEEEEeec
Q psy11701 269 TGDLKITDVAFADSGEYTCFARNKLGT-AQGSGSLTVKEH 307 (745)
Q Consensus 269 ~~~l~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~~ 307 (745)
...|.|.++...|+|.|+|.|.|..|. .+..+.|.|...
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 164 KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 457999999999999999999998887 456677777653
No 197
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=179.15 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=122.9
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
|+.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|.. ....+..|.|.+++.+|+|.|+|.+.+..|.
T Consensus 8 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 77 (184)
T 2gi7_A 8 KPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLW 77 (184)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc--------ccCcccEEEECcCChhhCceEEEEEEcCCCc
Confidence 3444455554 8999999999999987 7789999999865 1234568999999999999999999998764
Q ss_pred -eEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCC
Q psy11701 113 -AKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188 (745)
Q Consensus 113 -~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (745)
..+..+.|.|.. +|.+...| ...+.+|++++|.|.+.+.+ +.+.|+|+|..+... .........|.|.+++
T Consensus 78 ~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~---~~~~~~~~~L~i~~v~ 152 (184)
T 2gi7_A 78 SLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYK---NPERWYRASFPIITVT 152 (184)
T ss_dssp BCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSC---CCCEEEEESSSEEEET
T ss_pred cCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcce---ecCCCceEEEEEccCC
Confidence 334557777743 56676666 45688999999999987644 699999999887642 1223345689999999
Q ss_pred CCCCEEEEEEEEeCCc
Q psy11701 189 KSDTGNYGCNATNSLG 204 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g 204 (745)
.+|+|.|+|.|.|..+
T Consensus 153 ~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 153 AAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TCCSEEEEEEEECTTS
T ss_pred ccCCeEEEEEEEeCCC
Confidence 9999999999999754
No 198
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.86 E-value=4.2e-21 Score=178.32 Aligned_cols=186 Identities=16% Similarity=0.206 Sum_probs=137.8
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCC-ceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEE
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG-VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~ 580 (745)
++|++|.++++...+.++|.|+|++|...+| ++.+|.|+|+..+...+..... .....++.+.+|.|++.|.|
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~~~~~~~~~~~L~p~t~Y~~ 77 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVAT------NCHKTSWKVDQLQEGCSYYF 77 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEE------EECSSEEEECCCCTTCEEEE
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeec------CCCccEEEEcCCCCCCEEEE
Confidence 6799999999999999999999999975444 6999999999876544332221 34568999999999999999
Q ss_pred EEEEEecCCCCCCcceeeecccCCCC----CCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCcc
Q psy11701 581 HLAGYTKAGDGAESKYLFYVPFKNPD----NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656 (745)
Q Consensus 581 ~V~a~n~~G~g~~S~~~~~~~~~~~~----~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~ 656 (745)
+|.|.|..|.|.+|......+...++ .+.+.....+++.|+|.++... .++.+.+|.|.|+..+... +
T Consensus 78 ~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~-~~~~i~~Y~v~~~~~~~~~-~------ 149 (197)
T 3lpw_A 78 RVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHD-GGSRILGYIVEMQTKGSDK-W------ 149 (197)
T ss_dssp EEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCC-TTSCCCEEEEEEEETTCSC-C------
T ss_pred EEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcC-CCCcccEEEEEEEeCCCCc-e------
Confidence 99999999999987654433333222 2222334568899999875432 3347899999998642211 0
Q ss_pred ccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEE
Q psy11701 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736 (745)
Q Consensus 657 ~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~ 736 (745)
........+++.+.+|.|++.|.|+|+|.|..|.|++|++...
T Consensus 150 -------------------------------------~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~ 192 (197)
T 3lpw_A 150 -------------------------------------ATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVP 192 (197)
T ss_dssp -------------------------------------EEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSC
T ss_pred -------------------------------------EEeecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCccc
Confidence 0011236788999999999999999999999999999876544
Q ss_pred eC
Q psy11701 737 VT 738 (745)
Q Consensus 737 ~t 738 (745)
.+
T Consensus 193 v~ 194 (197)
T 3lpw_A 193 VI 194 (197)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 199
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.86 E-value=8.4e-21 Score=182.62 Aligned_cols=188 Identities=27% Similarity=0.540 Sum_probs=143.8
Q ss_pred ecCeEEec----CceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCC--ceeecCceEEEccCCCCCCEEEEE
Q psy11701 124 AAPYFTVE----PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP--RRKVGPNRITIENLRKSDTGNYGC 197 (745)
Q Consensus 124 ~~p~~~~~----~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~Y~C 197 (745)
.+|.|... +....+.+|+++.|.|.+.+.|.+.+.|+++|..+....... ........|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35655433 456789999999999999999999999999999887543322 233356789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeec---CCee-eeCCCceEEecCceEEEEEEEeecCCCeEEEee----CCEEccCc-e-EE-E
Q psy11701 198 NATNSLGYVYKDVYVNVLAH---APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH----NQKELTGG-R-YT-I 266 (745)
Q Consensus 198 ~~~~~~g~~~~~~~l~v~~~---~p~~-~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~-~-~~-~ 266 (745)
.+.+..+.....+.+.|... +|.+ ...+....+.+|+.++|.|.+.+.|.+.+.|++ ++..+... . +. .
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 99999998888888888753 2333 334667778899999999999999999999999 77665322 1 11 0
Q ss_pred ---------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceee
Q psy11701 267 ---------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311 (745)
Q Consensus 267 ---------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~ 311 (745)
...+.|.|.++..+|.|.|+|.|.|..|.....+.|.|..+|...
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-------
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCC
Confidence 123469999999999999999999999999999999998876543
No 200
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=8.2e-21 Score=174.06 Aligned_cols=164 Identities=21% Similarity=0.325 Sum_probs=129.8
Q ss_pred eeEecCCcEEEEEEEeecCCC--eeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEE
Q psy11701 43 EVALRNKKVELFCIFGGTPLP--QTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDL 120 (745)
Q Consensus 43 ~~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l 120 (745)
..+.+|++++|.|.+.+.|.+ .+.|+|++..|....... ....|.|. +.+|+|.|+|.+.+.. ...+.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~---~~~~l~i~--~~~d~G~Y~C~~~n~~----~~~~~l 78 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG---QKTEFKVD--SDDQWGEYSCVFLPEP----MGTANI 78 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC---SEEEEEEC--GGGCCEEEEEEEESTT----SCEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC---CcEEEEEe--chhhCeEEEEEEECCc----CcEEEE
Confidence 567899999999999888777 999999999887543221 23356665 6899999999999732 145788
Q ss_pred EEEecCeEEecCceeEeeCCCeEEEEEEEeecC-CCeEEEEe---CCEeccCCCCCCceee----cCceEEEccCC-CCC
Q psy11701 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIHWVH---NGKPISQAPPNPRRKV----GPNRITIENLR-KSD 191 (745)
Q Consensus 121 ~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~---~g~~~~~~~~~~~~~~----~~~~L~i~~v~-~~d 191 (745)
.|..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++..+.......++.. ....|.|.++. .+|
T Consensus 79 ~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d 158 (184)
T 3b5h_A 79 QLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEAD 158 (184)
T ss_dssp EECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTS
T ss_pred EEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccccc
Confidence 899999999988888899999999999999988 78999999 4443332211122222 12489999999 899
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 192 TGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 192 ~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
+|.|+|.|.|..|.....+.|.|.
T Consensus 159 ~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 159 PGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp SEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CceEEEEEEeCCCcceEEEEEEEe
Confidence 999999999999998888888875
No 201
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.86 E-value=1.1e-20 Score=173.33 Aligned_cols=174 Identities=16% Similarity=0.299 Sum_probs=135.0
Q ss_pred EeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCccee
Q psy11701 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477 (745)
Q Consensus 398 v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~ 477 (745)
+..+|.+|.++++.. .+.+++.|+|+++. +.+.+|.|+|+... .......+ ......+.|.+|.+++.|.
T Consensus 3 ~~t~p~~P~~l~~~~-~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~---~~~~~~~~-~~~~~~~~i~~L~p~t~Y~ 72 (186)
T 1qr4_A 3 AGTDLDNPKDLEVSD-PTETTLSLRWRRPV-----AKFDRYRLTYVSPS---GKKNEMEI-PVDSTSFILRGLDAGTEYT 72 (186)
T ss_dssp -----CCCEEEEEES-CCSSEEEEEEECCS-----SCCSEEEEEEECTT---CCEEEEEE-CTTCSEEEEESCCSSCEEE
T ss_pred ccCCCcCCCceEEEe-cCCCEEEEEEeCCC-----CCccEEEEEEEeCC---CCeeEEEC-CCCCCEEEECCCCCCCEEE
Confidence 446789999999987 88999999999852 46889999887432 23444555 5677899999999999999
Q ss_pred EEEEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccc
Q psy11701 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557 (745)
Q Consensus 478 ~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~ 557 (745)
|+|.|.|..|.+.+. .+.+.|. |.+|.++++...+.++|.|+|++|. +.|.+|.|+|+..+........
T Consensus 73 ~~V~a~~~~~~s~~~-~~~~~t~---p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~---- 141 (186)
T 1qr4_A 73 ISLVAEKGRHKSKPT-TIKGSTV---VGSPKGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGGTPNVVT---- 141 (186)
T ss_dssp EEEEEESSSCBCCCE-EEEEECC---CCCCSCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCCCCEEEE----
T ss_pred EEEEEEcCCccCCCE-EEEEECC---CCCCCccEEEEeCCCEEEEEEECCC---CcccEEEEEEEeCCCCCceEEE----
Confidence 999999987766543 3455553 7778899999999999999999875 5799999999987653221111
Q ss_pred cccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCc
Q psy11701 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594 (745)
Q Consensus 558 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S 594 (745)
+ .....++.|.+|.|++.|.|+|.|.|..|.|.+.
T Consensus 142 -~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 176 (186)
T 1qr4_A 142 -V-DGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI 176 (186)
T ss_dssp -E-ETTCCEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred -c-CCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCE
Confidence 2 4566899999999999999999999999988874
No 202
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.86 E-value=1e-20 Score=176.30 Aligned_cols=177 Identities=22% Similarity=0.357 Sum_probs=142.1
Q ss_pred EecCceeEeeCCCeEEEEEE-EeecCC-CeEEEEeCCEeccCCCCCCce-eecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 129 TVEPEFINAAEEETVTFECK-ASGLPE-PEIHWVHNGKPISQAPPNPRR-KVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 129 ~~~~~~~~v~~G~~~~l~C~-~~~~p~-~~v~W~~~g~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
...+....+.+|+++.|.|. +.+.|. +.+.|++++..+......... ...++.|.|.+++.+|+|.|+|.+.+..+.
T Consensus 12 ~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 91 (201)
T 3s97_C 12 PEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 91 (201)
T ss_dssp SSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGT
T ss_pred cCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCC
Confidence 34457788999999999999 888888 899999999877533222222 234678999999999999999999997765
Q ss_pred EEEE---EEEEEee------cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcc
Q psy11701 206 VYKD---VYVNVLA------HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITD 276 (745)
Q Consensus 206 ~~~~---~~l~v~~------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~ 276 (745)
.... ..+.+.. .+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+..........+.|.|.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~ 171 (201)
T 3s97_C 92 KSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN 171 (201)
T ss_dssp EEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECS
T ss_pred cchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEcc
Confidence 5432 3333321 345566666678899999999999999999999999999988776555555667899999
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 277 VAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 277 ~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
+..+|+|.|+|.|.|..|.....+.|.|+
T Consensus 172 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 172 IQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 99999999999999999999888888875
No 203
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.86 E-value=2.4e-22 Score=209.79 Aligned_cols=216 Identities=18% Similarity=0.212 Sum_probs=156.4
Q ss_pred CCCCEEEEEEEEeCCceEEEE-EEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCc
Q psy11701 373 ELDSGQYTCRAQTELDFIEAQ-ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451 (745)
Q Consensus 373 ~~~~g~y~c~a~n~~g~~~~~-~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~ 451 (745)
..+.|.|.|.+.|..+..... .......||.+|.++.. . .+.+++.|+|+++. ...+.++.+|.|+|+........
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~~-~-vs~tSv~LsW~pP~-~~gG~~i~~Y~V~~~~~~~~~~~ 380 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTA-V-GMGAKVELRWTPPQ-DSGGREDIVYSVTCEQCWPESGE 380 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEEE-E-CCTTSEEEEECCBS-CCCSCSCCEEEEEEEEECC-CCC
T ss_pred CCCCCccEEEEeccccccCCCccccccccCCCcccceEE-E-ecCCEEEEEEeCCc-CCCCCceeEEEEEEEeccCCCCc
Confidence 346789999999988865432 22334568999999854 5 78899999999853 22233699999998864321111
Q ss_pred e------eEEE--EccCceeEEEecccccCcceeEEEEEecCCCC---CCCCcceEEeCCCCCCCCCCceeEEEcCCceE
Q psy11701 452 I------RELI--VNKGESTTTEVDKFVPASKNFARVLAFNGAYN---GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520 (745)
Q Consensus 452 ~------~~~~--~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~---g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i 520 (745)
+ .... ........++|.+|.|++.|.|+|.|.|..|. ++.+..+.++|.+.+|. .+.....+.++|
T Consensus 381 ~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps---~~~~~~~s~tSV 457 (536)
T 3fl7_A 381 CGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPP---KVRLEGRSTTSL 457 (536)
T ss_dssp EEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCC---EEEEEECCC-CC
T ss_pred ccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCC---CCceeeccCCeE
Confidence 1 0010 01235778999999999999999999999997 45667778888766654 444577889999
Q ss_pred EEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 521 YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 521 ~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
.|+|++|.+.+|+|.+|.|+|+..+.. .... ......++++|.+|+|++.|.|+|.|.|.+|.|++|..+.+.
T Consensus 458 ~LsW~pP~~~ng~I~~Y~V~y~~~~~~--~~~~-----~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~ 530 (536)
T 3fl7_A 458 SVSWSIPPPQQSRVWKYEVTYRKKGDS--NSYN-----VRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQ 530 (536)
T ss_dssp EEEEECCTTTTTTCSEEEEEEEEC--C--CCCE-----EEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEE
T ss_pred EEEEECCcCCCCcccEEEEEEEECCCC--ceEE-----EEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEE
Confidence 999999988889999999999987654 1111 114567899999999999999999999999999999877554
Q ss_pred c
Q psy11701 601 P 601 (745)
Q Consensus 601 ~ 601 (745)
+
T Consensus 531 T 531 (536)
T 3fl7_A 531 T 531 (536)
T ss_dssp C
T ss_pred e
Confidence 3
No 204
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.86 E-value=7.5e-21 Score=176.68 Aligned_cols=177 Identities=18% Similarity=0.355 Sum_probs=139.6
Q ss_pred ccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEE
Q psy11701 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~ 479 (745)
..| +|.++.+.. .+.+++.|+|+++. ++.+.+|.|+|+..+... ......+ ......++|.+|.|++.|.|+
T Consensus 22 ~~P-~P~~l~~~~-~~~~sv~lsW~~p~----~~~i~~Y~v~~~~~~~~~-~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~ 93 (203)
T 2gee_A 22 EVP-QPTDLSFVD-ITDSSIGLRWTPLN----SSTIIGYRITVVAAGEGI-PIFEDFV-DSSVGYYTVTGLEPGIDYDIS 93 (203)
T ss_dssp CCC-CCEEEEEEC-CTTTCEEEEEECCS----SSSCCEEEEEEEESSSSS-CCEEEEE-ETTCCEEEECSCCTTCEEEEE
T ss_pred cCc-CCCccEEEe-cCCCEEEEEecCCC----CCCccEEEEEEEECCCCC-CceeEEc-CCCccEEEeCCCCCCCEEEEE
Confidence 344 788998887 88999999999854 356899999988765432 2233344 567889999999999999999
Q ss_pred EEEecCCCCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccc
Q psy11701 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559 (745)
Q Consensus 480 V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~ 559 (745)
|.|.|..|.+.++ .+.+...+| +|.++++...+.+++.|+|++|. ++.|.+|.|+|+............ +
T Consensus 94 V~a~~~~g~s~~~---~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~----~ 163 (203)
T 2gee_A 94 VYTVKNGGESTPT---TLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELS----I 163 (203)
T ss_dssp EEEESSSCBCCCE---EEEEECCCC-CCEEEEEEEEETTEEEEEEECCS--SCCCSEEEEEEEETTCGGGCEEEE----E
T ss_pred EEEEeCCCccccE---eeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC--CCCccEEEEEEEECCCCCccEEEE----c
Confidence 9999988877554 455555666 78999999999999999999985 468999999999865432211111 2
Q ss_pred cCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcc
Q psy11701 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595 (745)
Q Consensus 560 ~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~ 595 (745)
....+++.|.+|.|++.|.|+|.|.|..|.|+++.
T Consensus 164 -~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 164 -SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp -CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred -CCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence 55678999999999999999999999999999854
No 205
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.86 E-value=1.1e-20 Score=177.23 Aligned_cols=174 Identities=17% Similarity=0.319 Sum_probs=133.5
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC-------------------CCCeEeccCCcEEEEccCCCC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-------------------SDRISQGNYGKSLIIKHVEFS 97 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~-------------------~~~~~~~~~~~~L~i~~~~~~ 97 (745)
.+.+....+.+|++++|.|.+.+.+.+.+.|+|++..... ..++.+.. +++|.|.+++.+
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~-~~~L~i~~v~~~ 81 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS-NGSLLFQMITMK 81 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT-TSCEEECSCCGG
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec-CCeEEEcccccc
Confidence 4556667899999999999988888889999997542211 23444432 347999999999
Q ss_pred CCEEEEEEEEeCCeeeEEEEEEEEEEec---CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCc
Q psy11701 98 DQGSYTCEVSNGVGEAKSYSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~~~~~~~~l~V~~~---p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~ 174 (745)
|+|.|+|.+.+..+...+..+.|.|..+ |.+...+.. +.+|+.+.|.|.+.+.| +.+.|+++|..+..... ..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~-~~ 157 (208)
T 3r4d_A 82 DMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTER-MT 157 (208)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSS-EE
T ss_pred CCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCC-eE
Confidence 9999999999986555557788888765 555554444 88999999999999866 79999999998874321 12
Q ss_pred eeecCceEEEccCCCCCCEEEEEEEEeCCceEEEE-EEEEEe
Q psy11701 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD-VYVNVL 215 (745)
Q Consensus 175 ~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~-~~l~v~ 215 (745)
....++.|.|.++..+|+|.|+|.|.|..|..... +.|.|.
T Consensus 158 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 158 LSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp EETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred EcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 22244789999999999999999999999886644 566555
No 206
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.86 E-value=1.1e-20 Score=176.15 Aligned_cols=174 Identities=17% Similarity=0.220 Sum_probs=130.1
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCC-----CeeEEEE-CCEecCCCCCeEecc-----CCcEEEEccCCCCCCEEEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPL-----PQTIWSK-DGVPINPSDRISQGN-----YGKSLIIKHVEFSDQGSYTC 104 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~-----~~v~W~~-~~~~i~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C 104 (745)
+..++..+.+.+|++++|.|.+.+.|. +.+.|+| ++..+....++.+.. ...+|.|.+++.+|+|.|+|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 344556788999999999999998876 7899999 555554455665533 33689999999999999999
Q ss_pred EEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecC---ce
Q psy11701 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP---NR 181 (745)
Q Consensus 105 ~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~---~~ 181 (745)
.+.+..+.. +..+.|.|..++..... ....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ...... ..
T Consensus 85 ~~~~~~~~~-~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~----~~~~~~~~~~~ 158 (202)
T 3bp6_B 85 LVICGAAWD-YKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS----HIRTPEGLYQV 158 (202)
T ss_dssp EEEETTEEE-EEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE----EEECTTSCEEE
T ss_pred EEEeCCCcc-eEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCc----eeeCCCCCEEE
Confidence 999988766 47788888876421111 1124568999999999999999999999988755311 111112 34
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
+.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 159 ~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 159 TSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp EEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred EEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 6677999999999999999999998888777764
No 207
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.86 E-value=7.2e-21 Score=176.71 Aligned_cols=168 Identities=21% Similarity=0.371 Sum_probs=133.0
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCe-EEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPE-IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
..|.+...|....+.+|+++.|.|.+.+.|.+. +.|+|+|..+... .+.|.|.+++.+|+|.|+|.+.|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~---------~~~L~i~~v~~~D~G~Y~C~a~n~ 76 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ---------ASSYFIDAATVDDSGEYRCQTQLS 76 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC---------SSEEEESSCCGGGCEEEEEEETTS
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC---------ccEEEEecccccCCEEEEEEeCCC
Confidence 456777888888899999999999999987764 9999999988632 279999999999999999999874
Q ss_pred CceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeec-CCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCC
Q psy11701 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 281 (745)
.....+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. |.+.+.|++++..+.. ....+.|.|.++..+|
T Consensus 77 --~~s~~~~l~V~~-~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~----~~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 77 --TLSDPVQLEVHI-GWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY----FHHNSDFYIPKATLKD 148 (204)
T ss_dssp --BCCCCEEEEEEC-SSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGG
T ss_pred --cccccEEEEEec-CceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec----ccCCceEEECcCCccc
Confidence 334456777764 455555444 678899999999999766 5578999999987632 2245689999999999
Q ss_pred CEEEEEEEEeCC-ceEEEEEEEEEeecc
Q psy11701 282 SGEYTCFARNKL-GTAQGSGSLTVKEHT 308 (745)
Q Consensus 282 ~G~Y~C~~~n~~-g~~~~~~~l~v~~~p 308 (745)
+|.|+|.|.|.. +..+..+.|.|..++
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 149 SGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 999999999954 445667788887654
No 208
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=1.9e-21 Score=178.47 Aligned_cols=163 Identities=15% Similarity=0.189 Sum_probs=121.7
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCC-CeEeccCCcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
+.+...|.. .+.+|++|+|.|.+.+. .+.+.|+|+|..+.... .......+..|.|.+++.+|+|.|+|.+.+..+.
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 82 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELW 82 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCC
Confidence 344555665 89999999999999753 46899999998764211 1112234568999999999999999999886543
Q ss_pred e-EEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCC
Q psy11701 113 A-KSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188 (745)
Q Consensus 113 ~-~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (745)
. .+..+.|.|.. +|.+...| ...+.+|++++|.|.+.+ +.+.+.|+|+|..+.. ..........|.|.+++
T Consensus 83 ~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~---~~~~~~~~~~L~I~~v~ 157 (188)
T 1oll_A 83 SEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV---QRGYGKVQAEFPLGPVT 157 (188)
T ss_dssp CCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE---EEEECSSEEEEEEEECC
T ss_pred CCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc---cccCCCceeEEEECCCC
Confidence 2 24557777764 67776666 356899999999999876 4569999999976652 11112235689999999
Q ss_pred CCCCEEEEEEEEeCC
Q psy11701 189 KSDTGNYGCNATNSL 203 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~ 203 (745)
.+|+|.|+|.|.|..
T Consensus 158 ~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 158 TAHRGTYRCFGSYNN 172 (188)
T ss_dssp GGGCEEEEEECEEET
T ss_pred cCCCcEEEEEEEcCC
Confidence 999999999999864
No 209
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.86 E-value=5.4e-21 Score=177.72 Aligned_cols=179 Identities=14% Similarity=0.215 Sum_probs=128.0
Q ss_pred CCCceeEEEcC--CceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEE
Q psy11701 506 TVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583 (745)
Q Consensus 506 ~p~~~~~~~~~--~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~ 583 (745)
+|.++++..++ .++|.|+|++| .++.|.+|.|+|+....... +.... + .....++.|.+|.|++.|.|+|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~--~~~~~--~-~~~~~~~~i~~L~p~t~Y~~~V~ 74 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSVGR--WKEAT--I-PGHLNSYTIKGLKPGVVYEGQLI 74 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCSSC--CEEEE--E-CTTCCEEEECSCCTTEEEEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCCCc--eEEEe--c-CCCccEEEecCCCCCCEEEEEEE
Confidence 57888888877 99999999998 46799999999997654211 11111 2 45568999999999999999999
Q ss_pred EEecCCCCCCcceeeeccc--------------CC-C----CCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEecc
Q psy11701 584 GYTKAGDGAESKYLFYVPF--------------KN-P----DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644 (745)
Q Consensus 584 a~n~~G~g~~S~~~~~~~~--------------~~-~----~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~ 644 (745)
|.|..|.|.++........ .. + .++.+....++++.|+|.++ +|.|.+|.|.|+..
T Consensus 75 a~n~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~ 149 (201)
T 2ha1_A 75 SIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-----SDTVSGFRVEYELS 149 (201)
T ss_dssp EECTTSCEEEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS-----CTTEEEEEEEEEET
T ss_pred EEecccccCceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC-----CCCccEEEEEEEEC
Confidence 9999999876422111100 00 1 11233344678899999876 34789999999854
Q ss_pred CCCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecC
Q psy11701 645 NTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 724 (745)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~ 724 (745)
..+.. ......+++.+++.|.+|+|++.|.|+|+|.|.
T Consensus 150 ~~~~~------------------------------------------~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~ 187 (201)
T 2ha1_A 150 EEGDE------------------------------------------PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISE 187 (201)
T ss_dssp TTCCC------------------------------------------CEEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCc------------------------------------------eeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcC
Confidence 22211 011122567889999999999999999999999
Q ss_pred cccCCCCcceEEeC
Q psy11701 725 AYNGPPSEIISFVT 738 (745)
Q Consensus 725 ~G~g~~s~~~~~~t 738 (745)
+|.|++......+|
T Consensus 188 ~G~~~~~s~~~~tT 201 (201)
T 2ha1_A 188 DGEQSLILSTSQTT 201 (201)
T ss_dssp TSCEEEEEEEEEEC
T ss_pred CCCcccEeeEeecC
Confidence 99998877665554
No 210
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.86 E-value=9.8e-21 Score=178.19 Aligned_cols=180 Identities=28% Similarity=0.476 Sum_probs=140.7
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEecc---------CCCCCCceeecCceEEEccCCCCCCEEEE
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS---------QAPPNPRRKVGPNRITIENLRKSDTGNYG 196 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~---------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 196 (745)
..+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+. ......+.......|.|.+++.+|+|.|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~ 81 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYT 81 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEE
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEE
Confidence 456667888899999999999999998999999999876531 01123345555689999999999999999
Q ss_pred EEEEeCCc--eEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEE-EeecCCCeEEEeeCCE-EccCc----------
Q psy11701 197 CNATNSLG--YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWIHNQK-ELTGG---------- 262 (745)
Q Consensus 197 C~~~~~~g--~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~-~~~~p~~~i~W~~~~~-~~~~~---------- 262 (745)
|.+.+..| .....+.|.|.. +|.+...+....+.+|+.++|.|. +.+.|.+.+.|++++. .+...
T Consensus 82 C~~~~~~g~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~ 160 (212)
T 1f97_A 82 CMVSEEGGQNYGEVSIHLTVLV-PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNS 160 (212)
T ss_dssp EEEEETTSSSEEEEEEEEEEEB-CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSS
T ss_pred EEEEccCCCcccEEEEEEEEEc-CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCc
Confidence 99999876 556667888875 555555555667889999999999 7889999999999998 76532
Q ss_pred eEEE-eecCcEEEcccCCCCCEEEEEEEEeCCceE--EEEEEEEEee
Q psy11701 263 RYTI-LETGDLKITDVAFADSGEYTCFARNKLGTA--QGSGSLTVKE 306 (745)
Q Consensus 263 ~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~l~v~~ 306 (745)
++.. ...+.|.|.++..+|.|.|+|.|.|..|.. +..+.|.|..
T Consensus 161 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 161 SFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp CEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred eeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 2222 235689999999999999999999999987 4455565543
No 211
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.85 E-value=8.8e-21 Score=183.67 Aligned_cols=177 Identities=20% Similarity=0.295 Sum_probs=131.6
Q ss_pred EeeccceeEecCCcEEEEEEEee---cCCCeeEEEECCEecC------------------------------CCCCeEec
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGG---TPLPQTIWSKDGVPIN------------------------------PSDRISQG 83 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g---~p~~~v~W~~~~~~i~------------------------------~~~~~~~~ 83 (745)
..++..+.+.+|++++|.|.+.+ .|.+.+.|+|++..+. ...|+.+.
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 34455788999999999999988 7888999999875430 12344433
Q ss_pred c-CCcEEEEccCCCCCCEEEEEEEEeCCeee----EEEEEEEEEEec---CeEEe-cCceeEeeCCCeEEEEEEEeecCC
Q psy11701 84 N-YGKSLIIKHVEFSDQGSYTCEVSNGVGEA----KSYSIDLSVLAA---PYFTV-EPEFINAAEEETVTFECKASGLPE 154 (745)
Q Consensus 84 ~-~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~----~~~~~~l~V~~~---p~~~~-~~~~~~v~~G~~~~l~C~~~~~p~ 154 (745)
. ...+|.|.+++.+|+|.|+|.+.+..+.. .+..+.|.|..+ |.+.. .+....+.+|+++.|.|.+.+.|.
T Consensus 86 ~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~ 165 (250)
T 2fbo_J 86 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCAN 165 (250)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTT
T ss_pred cCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCC
Confidence 3 23479999999999999999999876532 245688888764 34443 355677889999999999999899
Q ss_pred CeEEEEeCCEeccCCCCC---------------------Cceee-cCceEEEccCCCCCCEEEEEEEEeCC---ceEEEE
Q psy11701 155 PEIHWVHNGKPISQAPPN---------------------PRRKV-GPNRITIENLRKSDTGNYGCNATNSL---GYVYKD 209 (745)
Q Consensus 155 ~~v~W~~~g~~~~~~~~~---------------------~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~~---g~~~~~ 209 (745)
+.++|+|++..+...... .+... ..+.|.|.+++.+|+|.|+|.|.|.. |.....
T Consensus 166 p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~ 245 (250)
T 2fbo_J 166 ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSS 245 (250)
T ss_dssp CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEE
T ss_pred CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCcccee
Confidence 999999999877542211 11111 45799999999999999999999944 455555
Q ss_pred EEEE
Q psy11701 210 VYVN 213 (745)
Q Consensus 210 ~~l~ 213 (745)
+.|.
T Consensus 246 ~~l~ 249 (250)
T 2fbo_J 246 TILK 249 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5543
No 212
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.85 E-value=5.3e-21 Score=175.21 Aligned_cols=159 Identities=20% Similarity=0.305 Sum_probs=126.2
Q ss_pred cceeEecCCcEEEEEEEeecCCCeeEEEECCEe--cC------------CCCCeEecc-----CCcEEEEccCCCCCCEE
Q psy11701 41 KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVP--IN------------PSDRISQGN-----YGKSLIIKHVEFSDQGS 101 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~--i~------------~~~~~~~~~-----~~~~L~i~~~~~~d~G~ 101 (745)
+.+.+.+|++++|.|.+.+.|.+.+.|+|++.. +. ...++.... ...+|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 345789999999999999889999999998863 21 022333322 24469999999999999
Q ss_pred EEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCce
Q psy11701 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181 (745)
Q Consensus 102 Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 181 (745)
|+|.+.+..+ .+.|.|.. +.. +....+.+|++++|.|.+.+.|.+.+.|++++..+ ....+.
T Consensus 83 Y~C~~~~~~~-----~~~l~V~~---~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~---------~~~~~~ 144 (184)
T 2ny1_B 83 YICEVEDQKE-----EVQLLVFG---LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN---------IQGGKT 144 (184)
T ss_dssp EEEEETTEEE-----EEEEEEEE---EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE---------EEESSE
T ss_pred EEEEEEcCCC-----cEEEEEEE---ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc---------ccCceE
Confidence 9999976543 35566653 222 45567899999999999988899999999987654 345679
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~ 217 (745)
|.|.+++.+|+|.|+|.|.|..+.....+.|.|...
T Consensus 145 L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~ 180 (184)
T 2ny1_B 145 LSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF 180 (184)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEec
Confidence 999999999999999999999998888888888753
No 213
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.85 E-value=1.3e-20 Score=184.61 Aligned_cols=197 Identities=18% Similarity=0.261 Sum_probs=129.2
Q ss_pred eEeeccceeEecCCcEEEEEEEe---ecCCCeeEEEECCEecCCC------------------CCeEec----cCCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFG---GTPLPQTIWSKDGVPINPS------------------DRISQG----NYGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~---g~p~~~v~W~~~~~~i~~~------------------~~~~~~----~~~~~L~ 90 (745)
+...+....+.+|++++|.|.+. +.+.+.+.|+|++...... .++.+. ..+.+|.
T Consensus 8 v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 87 (268)
T 3mj6_A 8 LTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLL 87 (268)
T ss_dssp ----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEE
T ss_pred cccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEE
Confidence 45667778999999999999997 6777789999965433211 344432 2236899
Q ss_pred EccCCCCCCEEEEEEEEeCCeee-EEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEE---eecCCCeEEEEeC-CEe
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEPEIHWVHN-GKP 165 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~-~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~---~~~p~~~v~W~~~-g~~ 165 (745)
|.+++.+|+|.|+|.+.+..+.. ....+.|.|.. ..|....+.+|++++|.|.+ .+.|.+.+.|+++ +..
T Consensus 88 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~ 162 (268)
T 3mj6_A 88 LQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSH 162 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTC
T ss_pred ECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCC
Confidence 99999999999999999875443 34556666642 34567789999999999999 5668889999994 321
Q ss_pred cc------------------CCCCCCcee------ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCee
Q psy11701 166 IS------------------QAPPNPRRK------VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221 (745)
Q Consensus 166 ~~------------------~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~ 221 (745)
.. ......+.. ...+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~ 242 (268)
T 3mj6_A 163 TEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242 (268)
T ss_dssp SSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC----
T ss_pred CcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCee
Confidence 11 011111111 235689999999999999999999999998899999997778888
Q ss_pred eeCCCceEEecCceEE
Q psy11701 222 TEAPKDEYTVDGKTVV 237 (745)
Q Consensus 222 ~~~~~~~~v~~g~~~~ 237 (745)
...|....+.+|+.+.
T Consensus 243 ~~~p~~~~~~~~q~~~ 258 (268)
T 3mj6_A 243 TISPTPPTDKGQQGIL 258 (268)
T ss_dssp ----------------
T ss_pred eeCCCCCCCCcceecc
Confidence 8888887777776543
No 214
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.85 E-value=8e-20 Score=182.81 Aligned_cols=273 Identities=12% Similarity=0.090 Sum_probs=175.4
Q ss_pred CCceEEecCceEEEEEEEeec-----CCCeEEEeeCCEEccCceEEEeec----CcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 225 PKDEYTVDGKTVVLTCRVFGA-----PKPEVNWIHNQKELTGGRYTILET----GDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 225 ~~~~~v~~g~~~~l~C~~~~~-----p~~~i~W~~~~~~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
|....+..|++++|.|.+.+. +.+.+.|.+++..+..+++..... +.|.|.++...|+|.|.|.+.+..+.
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 456678899999999999886 467899999998886554432222 45999999999999999988665555
Q ss_pred EEEEEEEEEeecceeecCCCcEEEe-c--CCeEEEEEEEEecC--CCCcEEEEeeCCeeccCCCCCeEEE---cCCeEEE
Q psy11701 296 AQGSGSLTVKEHTHITDQPEDYEVE-A--GQSATFRCNAVSDP--SLKLSIVWLRGSEPIDFESEPRFVQ---SNDYSLT 367 (745)
Q Consensus 296 ~~~~~~l~v~~~p~~~~~p~~~~~~-~--g~~~~l~C~~~~~~--~~~~~i~W~~~~~~~~~~~~~~~~~---~~~~~l~ 367 (745)
....+.|.|..+| ..|.++.+. . ...+.+.|...... ...+.+.+...+............. .......
T Consensus 87 ~~~~~~l~v~~~P---~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T 2d9q_B 87 ILDQVELRAGYPP---AIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCS 163 (313)
T ss_dssp EEEEEEEEECCCC---CCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEE
T ss_pred eEEEEEEccCCCC---CCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCCcccccCCCCCCCcEEE
Confidence 5556777776654 445555442 2 23455555433221 1124444443321111000001111 1122344
Q ss_pred Ee--cCCCCCCEEEEEEEEeCCceEEEE-EEEEE--eccCCCCCCceeEEee------cCceeEEEEEeCCCCCcceeee
Q psy11701 368 VT--KSSELDSGQYTCRAQTELDFIEAQ-ATLTV--QVPLEAPSNFTLIQVI------DAKKAVVSWNPVSPQSLRGHFR 436 (745)
Q Consensus 368 i~--~~~~~~~g~y~c~a~n~~g~~~~~-~~l~v--~~pp~~P~~~~~~~~~------~~~~v~l~W~~~~~~~~~~~i~ 436 (745)
+. .+.....+.++|.|.|..|..... ..+.. ..+|.+|.++.+.. . ..+++.|+|+++.. .++.+.
T Consensus 164 ~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~-~~~~~~~~~~~l~l~W~~p~~--~~~~~l 240 (313)
T 2d9q_B 164 IPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDP-SPEAAPPQAGCLQLSWEPWQP--GLHINQ 240 (313)
T ss_dssp EEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC--------CCSCEEEEEECCGG--GTTSCE
T ss_pred ECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEE-ecccccCCCCeEEEEECCCCC--CCceeE
Confidence 43 478888999999999999976432 22221 14688998887754 3 46899999998642 223357
Q ss_pred eEEEEEE-eccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCC---CCcceEEeCCCCCCC
Q psy11701 437 GYKVQTW-TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP---PSEIISFVTPEGVPG 505 (745)
Q Consensus 437 ~y~i~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~---~S~~~~~~t~~~~P~ 505 (745)
+|.|+|+ ..+.. .|..+.........+.|.+|.+++.|.|+|+|.|..|.|. +|..+.++|.+++|+
T Consensus 241 ~Y~v~y~~~~~~~--~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 241 KCELRHKPQRGEA--SWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp EEEEEEEESSSCC--CCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred EEEEEEccCCCCC--CcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 9999998 44332 3443332244567899999999999999999999988775 667788999888774
No 215
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.85 E-value=2e-20 Score=176.19 Aligned_cols=192 Identities=16% Similarity=0.150 Sum_probs=136.9
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCC-CCCccEEE
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL-EPSTKYRI 580 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~t~Y~~ 580 (745)
.+|++|.++++...+.+++.|+|++|.+.++ +.+|.|+|+..+... .... .......++.|.+| .+++.|.|
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~-~~~~-----~~~~~~~~~~i~~L~~~~t~Y~~ 78 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKF-ADCK-----AKRDTPTSCTVDYSTVYFVNIEV 78 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEEC-CCEE-----CCSSCTTEEECSSCCCTTSCEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCc-cccc-----cccCCcceEEEcCCccccccEEE
Confidence 5788999999999888999999999987655 489999998764321 1111 11445688999999 99999999
Q ss_pred EEEEEecCCCCCCcceeeecccC----CCCCCCCCC--CCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccC
Q psy11701 581 HLAGYTKAGDGAESKYLFYVPFK----NPDNVEGRG--STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654 (745)
Q Consensus 581 ~V~a~n~~G~g~~S~~~~~~~~~----~~~~~~~~~--~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~ 654 (745)
+|.|.|..|.+.++......... .+..+.+.. ..++++.|+|+++.. .+|.|.+|.|+|+..+. ..+....
T Consensus 79 ~V~A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~y~~~~~-~~~~~~~ 155 (215)
T 1bqu_A 79 WVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI--KSVIILKYNIQYRTKDA-STWSQIP 155 (215)
T ss_dssp EEEEEETTEEEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGG--GGTSCEEEEEEEEETTC-SSCEECC
T ss_pred EEEEEecccCccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCC--CCcceEEEEEEEccCCC-CCceEec
Confidence 99999999998743322211111 111222222 266899999997764 46788999999987532 1111110
Q ss_pred ccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCC---CC
Q psy11701 655 VLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP---PS 731 (745)
Q Consensus 655 ~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~---~s 731 (745)
.. ...+..+.+.|.+|.|++.|.|+|+|.|.+|.|+ +|
T Consensus 156 ~~---------------------------------------~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S 196 (215)
T 1bqu_A 156 PE---------------------------------------DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWS 196 (215)
T ss_dssp GG---------------------------------------GGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCC
T ss_pred cc---------------------------------------cccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCC
Confidence 00 0034667899999999999999999999999866 67
Q ss_pred cceEEeCCCCC
Q psy11701 732 EIISFVTPEGG 742 (745)
Q Consensus 732 ~~~~~~t~~~~ 742 (745)
+++.++|++++
T Consensus 197 ~~~~~~T~~~~ 207 (215)
T 1bqu_A 197 EEASGITYEDR 207 (215)
T ss_dssp CCEEEEECCCH
T ss_pred CcccccccccC
Confidence 78999998765
No 216
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.85 E-value=4.1e-21 Score=173.62 Aligned_cols=157 Identities=17% Similarity=0.196 Sum_probs=120.1
Q ss_pred ceeEecCCcEEEEEEEee--cCCCeeEEEECCEecC----------CCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeC
Q psy11701 42 KEVALRNKKVELFCIFGG--TPLPQTIWSKDGVPIN----------PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~~g--~p~~~v~W~~~~~~i~----------~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
.+.+.+|++++|.|...+ .+.+.|.|+|++..|. ...|+.+...+ +|.|.+++.+|+|.|+|.+.+.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g-sL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG-DLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS-CEEESSCCGGGCEEEEEEEEET
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC-cEEEcccccccCEEEEEEEEeC
Confidence 467899999999995433 4566899999997552 34566664444 5999999999999999999998
Q ss_pred Ceee-EEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCC
Q psy11701 110 VGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188 (745)
Q Consensus 110 ~g~~-~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (745)
.|.. .+..+.|.|..++. .| .....+..+.|.|.+.+.|.+.++|+|+|..+.... .+.|.++.
T Consensus 84 ~g~~~~~~~~~l~V~~~~~---~p--~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~----------~~~i~~~~ 148 (176)
T 1hng_A 84 NGTRILNKALDLRILEMVS---KP--MIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR----------QKTMSYQW 148 (176)
T ss_dssp TCCEEEEEEEEEEEECCCC---CC--EEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEES----------SSEEEEEC
T ss_pred CCCEEEEEEEEEEEeCCCC---CC--EEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCC----------cEEEEEEE
Confidence 8876 45667888876431 11 112235569999999999999999999999876321 25566888
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 189 KSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
.+|+|.|+|.|.|..|.....+.|.+
T Consensus 149 ~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 149 TNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred ccCCeEEEEEEEecCCCceecccccC
Confidence 99999999999999998877765543
No 217
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.85 E-value=2.7e-20 Score=175.10 Aligned_cols=168 Identities=26% Similarity=0.386 Sum_probs=133.1
Q ss_pred eCCCeEEEEEEEeec-CCCeEEEEeCCEeccCCCCCCceeec--CceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 138 AEEETVTFECKASGL-PEPEIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 138 ~~G~~~~l~C~~~~~-p~~~v~W~~~g~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
..++.+.|.|.+.+. |.+.++|+|+|..+...... ..... ...|.|.+++.+|+|.|+|.+.|..|.....+.|.+
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRV-KTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSE-EEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeE-EEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 468888999998874 57899999999998754221 11122 245999999999999999999998888777776655
Q ss_pred ee--------------------cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEEeec-C--
Q psy11701 215 LA--------------------HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTILET-G-- 270 (745)
Q Consensus 215 ~~--------------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~-~-- 270 (745)
.. .++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .++..... +
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~ 173 (212)
T 2r15_A 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRT 173 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTE
T ss_pred eeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCE
Confidence 42 234444556667899999999999999999999999999988764 34444332 2
Q ss_pred -cEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 271 -DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 271 -~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
.|.|.+++..|.|.|+|.|.|..|.....+.|.|..
T Consensus 174 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 174 AYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 799999999999999999999999988888888864
No 218
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.85 E-value=1.9e-20 Score=174.04 Aligned_cols=176 Identities=15% Similarity=0.303 Sum_probs=134.3
Q ss_pred CCCCceeEEeec--CceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEE
Q psy11701 404 APSNFTLIQVID--AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481 (745)
Q Consensus 404 ~P~~~~~~~~~~--~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~ 481 (745)
+|.++.+.. .+ .+++.|+|+++ .++.+.+|.|+|+.... ...+..+.+ ......++|.+|.|++.|.|+|.
T Consensus 2 ~P~~l~v~~-v~~~~~si~l~W~~p----~~~~i~~Y~v~~~~~~~-~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~ 74 (201)
T 2ha1_A 2 GPVEVFITE-TPSQPNSHPIQWNAP----QPSHISKYILRWRPKNS-VGRWKEATI-PGHLNSYTIKGLKPGVVYEGQLI 74 (201)
T ss_dssp CCCEEECCS-CSCCSSCEEEEEECC----SSTTCCEEEEEEEETTC-SSCCEEEEE-CTTCCEEEECSCCTTEEEEEEEE
T ss_pred CceeEEEEe-cCCCCCEEEEEEeCC----CCCCceEEEEEEEECCC-CCceEEEec-CCCccEEEecCCCCCCEEEEEEE
Confidence 577888766 66 89999999985 35679999999886543 233455566 66678999999999999999999
Q ss_pred EecCCCCCCCCcceEEeCCCC-----------CCCC-C----CceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcC
Q psy11701 482 AFNGAYNGPPSEIISFVTPEG-----------VPGT-V----QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545 (745)
Q Consensus 482 a~n~~G~g~~S~~~~~~t~~~-----------~P~~-p----~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~ 545 (745)
|.|..|.|.++ .+.++|... .|.+ | .++++...+.++|.|+|++| ++.|.+|.|+|+...
T Consensus 75 a~n~~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~ 150 (201)
T 2ha1_A 75 SIQQYGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA---SDTVSGFRVEYELSE 150 (201)
T ss_dssp EECTTSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS---CTTEEEEEEEEEETT
T ss_pred EEecccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC---CCCccEEEEEEEECC
Confidence 99999998754 344443321 1222 2 46788888999999999988 358999999999754
Q ss_pred CcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcc
Q psy11701 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595 (745)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~ 595 (745)
...+..... + .+...++.|.+|.|++.|.|+|.|+|..|.|.+..
T Consensus 151 ~~~~~~~~~----v-~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s 195 (201)
T 2ha1_A 151 EGDEPQYLD----L-PSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLIL 195 (201)
T ss_dssp TCCCCEEEE----E-ETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEE
T ss_pred CCCceeEEE----c-CCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEe
Confidence 333322111 2 45678999999999999999999999999998743
No 219
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.84 E-value=4e-20 Score=171.40 Aligned_cols=177 Identities=16% Similarity=0.233 Sum_probs=128.3
Q ss_pred EecCceeE-eeCCCeEEEEEEEeecCCCeEEEEeCC-EeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceE
Q psy11701 129 TVEPEFIN-AAEEETVTFECKASGLPEPEIHWVHNG-KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206 (745)
Q Consensus 129 ~~~~~~~~-v~~G~~~~l~C~~~~~p~~~v~W~~~g-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~ 206 (745)
.+.|.... +.+|+++.|.|.+.|.|.+.+.|+++. ..+.. ..........|.|.+++.+|+|.|+|.|.|..|..
T Consensus 4 ~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~---~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 80 (202)
T 1vca_A 4 ETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL 80 (202)
T ss_dssp EEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSS---EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEE
T ss_pred EECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccc---eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceE
Confidence 34444443 459999999999999999999999843 22110 00011123579999999999999999999998888
Q ss_pred EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCC---CeEEEeeCCEEccCceEE--------EeecCcEEEc
Q psy11701 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK---PEVNWIHNQKELTGGRYT--------ILETGDLKIT 275 (745)
Q Consensus 207 ~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~~~~~~--------~~~~~~l~i~ 275 (745)
...+.|.|...|..+...+. ..+.+|+.++|.|.+.+.++ +.+.|++++..+....+. ......|.|.
T Consensus 81 ~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~ 159 (202)
T 1vca_A 81 EKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFT 159 (202)
T ss_dssp EEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEEC
T ss_pred eeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEE
Confidence 88889999865544444443 56889999999999988643 379999999876432211 1112346788
Q ss_pred ccCCCCCEEEEEEEEeCCce-------EEEEEEEEEeecce
Q psy11701 276 DVAFADSGEYTCFARNKLGT-------AQGSGSLTVKEHTH 309 (745)
Q Consensus 276 ~~~~~d~G~Y~C~~~n~~g~-------~~~~~~l~v~~~p~ 309 (745)
....+|.|.|+|.|.|..+. .+....|.|..+|.
T Consensus 160 ~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 160 PVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 88888999999999998765 35677788877663
No 220
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.84 E-value=4.2e-20 Score=167.43 Aligned_cols=166 Identities=21% Similarity=0.360 Sum_probs=131.5
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCe-EEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPE-IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.+|.+...|....+.+|++++|.|.+.+.|.+. +.|+|+|..+.. ..+.|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~---------~~~~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS---------QASSYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES---------SCSEEEESSCCGGGCEEEEEECSSS
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC---------CceEEEEeCCCcccCEEEEEEeeCC
Confidence 367788888888899999999999999887765 899999988762 3568999999999999999999985
Q ss_pred CceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCC-eEEEeeCCEEccCceEEEeecCcEEEcccCCCC
Q psy11701 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP-EVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 281 (745)
.+ ...+.|.|.. ++.+... ....+.+|+.++|.|.+.+.+++ .+.|++++..+.. ....+.|.|.+++.+|
T Consensus 77 ~~--s~~~~l~V~~-~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~----~~~~~~L~i~~v~~~d 148 (175)
T 1fnl_A 77 TL--SDPVQLEVHI-GWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY----FHHNSDFHIPKATLKD 148 (175)
T ss_dssp CC--CCCEEEEEEC-SSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGG
T ss_pred cc--cccEEEEEeC-CCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC----CCCCCEEEEcccChhh
Confidence 54 3345666663 3333333 44678899999999999887664 9999999987732 2245789999999999
Q ss_pred CEEEEEEEEeCCce-EEEEEEEEEee
Q psy11701 282 SGEYTCFARNKLGT-AQGSGSLTVKE 306 (745)
Q Consensus 282 ~G~Y~C~~~n~~g~-~~~~~~l~v~~ 306 (745)
+|.|+|.|.|..+. .+..+.|.|.+
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 149 SGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999997664 44566666654
No 221
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.84 E-value=5.8e-21 Score=185.20 Aligned_cols=198 Identities=18% Similarity=0.263 Sum_probs=121.8
Q ss_pred CCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecC-----CCeEEEEeCC--Eec
Q psy11701 94 VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-----EPEIHWVHNG--KPI 166 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-----~~~v~W~~~g--~~~ 166 (745)
++.+|+|.|+|.|. |... ..+.+.+..++.+...|....+.+|++++|.|.+.+.| .+.+.|+|++ ..+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~-~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSF-TNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc---hhhh-hhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 68899999999997 4333 33455555577788889999999999999999998877 4899999843 222
Q ss_pred c---------CCCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEEE-EEEEEEee--cCCeeeeCCCceEE
Q psy11701 167 S---------QAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYK-DVYVNVLA--HAPEITEAPKDEYT 230 (745)
Q Consensus 167 ~---------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~-~~~l~v~~--~~p~~~~~~~~~~v 230 (745)
. ......++.. ....|.|.+++.+|+|.|+|.|.|..+.... ...+.|.. .+|.+...+.....
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~ 166 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQ 166 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHH
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhh
Confidence 1 1111223322 2348999999999999999999987654322 23455542 35666654444434
Q ss_pred ecCceEEEEEEEeec-CC-CeEEEeeCCEEccCc-eEEE----------eecCcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 231 VDGKTVVLTCRVFGA-PK-PEVNWIHNQKELTGG-RYTI----------LETGDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 231 ~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~-~~~~----------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
..|+.++|.|.+.+. |. +.+.|++++..+... .... ...+.|.|.++..+|+|.|+|.|.|....
T Consensus 167 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 167 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred ccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 468899999999885 44 469999999887654 1111 11236999999999999999999998654
No 222
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=174.09 Aligned_cols=167 Identities=17% Similarity=0.291 Sum_probs=127.0
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+...............|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 36777778877 8899999999999998 778999999998775321111111234689999999999999999999998
Q ss_pred ce--EEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceE-----EEeecCcEEE
Q psy11701 204 GY--VYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY-----TILETGDLKI 274 (745)
Q Consensus 204 g~--~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-----~~~~~~~l~i 274 (745)
|. ....+.|.|.. .+|.+...+.. .+.+|+.++|.|.+.+. .+.+.|++++..+..... .....+.|.|
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 159 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPM 159 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEe
Confidence 73 23446666653 34566655544 67899999999999874 458999999876643321 1224567999
Q ss_pred cccCCCCCEEEEEEEEeCCc
Q psy11701 275 TDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 275 ~~~~~~d~G~Y~C~~~n~~g 294 (745)
.+++.+|+|.|+|.|.|..+
T Consensus 160 ~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 160 SPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CSCCGGGCEEEEEEEECGGG
T ss_pred CCCcccCCCeEEEEEEcCCC
Confidence 99999999999999999876
No 223
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.84 E-value=1.1e-20 Score=177.86 Aligned_cols=169 Identities=20% Similarity=0.299 Sum_probs=128.4
Q ss_pred ceeEecCCcEEEEEEEeecCCCeeEEEEC--CEecC------------CCCCeEe--ccCCcEEEEccCCCCCCEEEEEE
Q psy11701 42 KEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPIN------------PSDRISQ--GNYGKSLIIKHVEFSDQGSYTCE 105 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i~------------~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~ 105 (745)
...+.+|++++|.|.+.+.|.+.+.|+|. +..+. ...++.. .....+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 77899999999999999899999999982 22110 1235543 23345799999999999999999
Q ss_pred EEeCCe--eeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEeccCCCCCCc---
Q psy11701 106 VSNGVG--EAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPISQAPPNPR--- 174 (745)
Q Consensus 106 ~~~~~g--~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~~~~~~~~--- 174 (745)
+.+..+ ......+.|.|. .+|.+...+....+.+|+.++|.|.+.+. |+ +.+.|+|+|..+........
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 168 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSK 168 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCc
Confidence 999876 344456788888 78888777766666799999999999885 44 49999999998864211111
Q ss_pred ---eeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 175 ---RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210 (745)
Q Consensus 175 ---~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~ 210 (745)
.....+.|.|.++..+|+|.|+|.|.|..+.....+
T Consensus 169 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 169 SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 111234689999999999999999999987655543
No 224
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.84 E-value=1.3e-20 Score=170.99 Aligned_cols=169 Identities=22% Similarity=0.361 Sum_probs=130.7
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCC-eEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEe
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEP-EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
..+|.+...|....+.+|++++|.|.+.+.+.+ .+.|++++..+.. ..+.|.|.+++.+|+|.|+|.+.|
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE---------TNSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC---------CSSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC---------CceEEEEeccceecCEEEEEEcCC
Confidence 457888888888899999999999999887775 7999999998763 357999999999999999999987
Q ss_pred CCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEe-ecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCC
Q psy11701 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280 (745)
Q Consensus 202 ~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 280 (745)
..+.. .+.|.|. .++.+... ....+.+|+.++|.|.+. +.|.+.+.|++++..+... ...+.|.|.++..+
T Consensus 73 ~~~s~--~~~l~V~-~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----~~~~~L~i~~v~~~ 144 (176)
T 1f2q_A 73 VNESE--PVYLEVF-SDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW----YENHNISITNATVE 144 (176)
T ss_dssp SSCCC--CEEEEEE-CSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC----CCSSEEEESSCCGG
T ss_pred ccccc--cEEEEEe-CcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee----cCCCeEEECCCCcc
Confidence 65533 4556665 24433333 345788999999999995 4566699999999887432 23568999999999
Q ss_pred CCEEEEEEEEeCCce-EEEEEEEEEeecc
Q psy11701 281 DSGEYTCFARNKLGT-AQGSGSLTVKEHT 308 (745)
Q Consensus 281 d~G~Y~C~~~n~~g~-~~~~~~l~v~~~p 308 (745)
|+|.|+|.|.|..+. .+..+.|.|..+|
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 999999999997544 4456788887765
No 225
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.84 E-value=5.1e-20 Score=172.90 Aligned_cols=177 Identities=20% Similarity=0.188 Sum_probs=127.2
Q ss_pred cCceeEeeCC--CeEEEEEEEeecCCCeEEEEeC---CEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 131 EPEFINAAEE--ETVTFECKASGLPEPEIHWVHN---GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 131 ~~~~~~v~~G--~~~~l~C~~~~~p~~~v~W~~~---g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
.|....+.+| +++.|.|.+.+ |.+.++|+++ |..+... ..........|.|.+++.+|+|.|+|.|.|..+.
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~--~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG--NRISWDSKKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS--SSCEEETTTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC--CcccccCCccEEEccCChhcCceEEEEEEECCee
Confidence 4577889999 99999999987 7789999884 6666533 1122345578999999999999999999985444
Q ss_pred EEEE-EEEEEee-cCCeeeeCC-CceEEecCceEEEEEEEeecCC--CeEEEeeCCEEccCceE---E---------Eee
Q psy11701 206 VYKD-VYVNVLA-HAPEITEAP-KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRY---T---------ILE 268 (745)
Q Consensus 206 ~~~~-~~l~v~~-~~p~~~~~~-~~~~v~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~---~---------~~~ 268 (745)
.... +.|.|.. .+|.+...+ ....+.+|++++|.|.+.+.|. +.+.|++++..+..... . ...
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKF 169 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEE
T ss_pred EEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceee
Confidence 3322 5666643 134444444 4448899999999999998654 47999998876432211 0 111
Q ss_pred cCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeeccee
Q psy11701 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310 (745)
Q Consensus 269 ~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~ 310 (745)
.+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 336999999999999999999999999999999999887754
No 226
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=5.8e-21 Score=183.10 Aligned_cols=214 Identities=14% Similarity=0.146 Sum_probs=123.8
Q ss_pred eeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCC---eEeccCCcEEEEccCCCCCCEEEEEEEEeCC-
Q psy11701 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV- 110 (745)
Q Consensus 35 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~- 110 (745)
.+...|. ..+.+|++|+|.|.+.+ +.+.+.|+|+|..+..... ......+..|.|.+++.+|+|.|+|.+.+..
T Consensus 9 ~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 86 (257)
T 1b6u_A 9 SLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHS 86 (257)
T ss_dssp EECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSC
T ss_pred EEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCC
Confidence 3334444 77999999999999974 4679999999875531110 0111234579999999999999999998642
Q ss_pred ---eeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee--ecCceE
Q psy11701 111 ---GEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK--VGPNRI 182 (745)
Q Consensus 111 ---g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~--~~~~~L 182 (745)
....+..+.|.|.. +|.+...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+.......... ..+..|
T Consensus 87 ~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l 164 (257)
T 1b6u_A 87 PYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADF 164 (257)
T ss_dssp TTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEE
T ss_pred CccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCceeEEE
Confidence 12334557777764 467766665 468999999999999875 46999999998765322111111 125689
Q ss_pred EEccCCCCCCEEEEEEEEeCCc-----eEEEEEEEEEeecCCeeeeC-CCceEEecCceEEEEEEEeecCCCeEEEeeCC
Q psy11701 183 TIENLRKSDTGNYGCNATNSLG-----YVYKDVYVNVLAHAPEITEA-PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~~~~~~g-----~~~~~~~l~v~~~~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~ 256 (745)
.|.+++ |+|.|+|.+.+... ..+..+.|.|.. +|.+... |.......|..+.|.|.+ |.+.+.|.|...+
T Consensus 165 ~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g-~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 165 PLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTG-NPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp EEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBC-CC--------------------------------------
T ss_pred Eecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEec-cCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 999998 99999999997532 223346677765 4444422 223345568899999876 5556678887654
No 227
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.84 E-value=8.5e-20 Score=183.36 Aligned_cols=268 Identities=16% Similarity=0.176 Sum_probs=175.8
Q ss_pred eeeeCCCceEEecCceEEEEEEEeecC-CCeEEEeeCCEEccC-ceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEE
Q psy11701 220 EITEAPKDEYTVDGKTVVLTCRVFGAP-KPEVNWIHNQKELTG-GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297 (745)
Q Consensus 220 ~~~~~~~~~~v~~g~~~~l~C~~~~~p-~~~i~W~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 297 (745)
.+..++....+..|++++|.|.+.+.+ .+.|.|++++..+.. ........+.|.|.++...|+|.|+|.+ .|...
T Consensus 8 ~~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~~ 84 (325)
T 1n26_A 8 AQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRPA 84 (325)
T ss_dssp CCCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEES---SSSCS
T ss_pred ccccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccccccccccceEEecccchhhCeEeEEEe---CCEEe
Confidence 344444444557999999999988764 679999998765421 1222344678999999999999999993 56666
Q ss_pred EEEEEEEeecceeecCCCcEEEe-cCCeEEEEEEEEec----CCCCcEEEEeeC-Cee-ccCCCCCeEE--EcCCeEEEE
Q psy11701 298 GSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSD----PSLKLSIVWLRG-SEP-IDFESEPRFV--QSNDYSLTV 368 (745)
Q Consensus 298 ~~~~l~v~~~p~~~~~p~~~~~~-~g~~~~l~C~~~~~----~~~~~~i~W~~~-~~~-~~~~~~~~~~--~~~~~~l~i 368 (745)
..+.|.|..+|. .|. +... .+....+.|.+... ....+.+.+.+. +.. ... ...... ........|
T Consensus 85 ~~~~L~V~~pP~---~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~-~~~c~~~~~~~~~~c~i 159 (325)
T 1n26_A 85 GTVHLLVDVPPE---EPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDF-QEPCQYSQESQKFSCQL 159 (325)
T ss_dssp CEEEEEECCCCC---CCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEE-EEEEEEETTTTEEEEEE
T ss_pred eeEEEEeccCCC---CCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcc-cccCCCCCCCCCEEEEE
Confidence 778899988663 344 4443 34344566666522 111234444432 110 000 000000 012235666
Q ss_pred ecCC-CCCCEEEEEEEEeCCceEEE-EEEE--EEeccCCCCCCceeEEeec--CceeEEEEEeCCCCCcceeeeeEEEEE
Q psy11701 369 TKSS-ELDSGQYTCRAQTELDFIEA-QATL--TVQVPLEAPSNFTLIQVID--AKKAVVSWNPVSPQSLRGHFRGYKVQT 442 (745)
Q Consensus 369 ~~~~-~~~~g~y~c~a~n~~g~~~~-~~~l--~v~~pp~~P~~~~~~~~~~--~~~v~l~W~~~~~~~~~~~i~~y~i~~ 442 (745)
..+. ....+.|+|.|.|..|.... ...+ ....+|.+|.++.+.. .. .+++.|+|+++.....++.+.+|.|+|
T Consensus 160 ~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~-~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~y 238 (325)
T 1n26_A 160 AVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTA-VARNPRWLSVTWQDPHSWNSSFYRLRFELRY 238 (325)
T ss_dssp CCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEE-CTTCTTCEEEEEECCTTCCCSSSCEEEEEEE
T ss_pred CCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEE-ecCCCCEEEEEECCCCccCCCcEeEEEEEEE
Confidence 6554 45778899999999997642 2222 2235689999998876 43 368999999976544566789999999
Q ss_pred EeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCc---ceEEeC
Q psy11701 443 WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---IISFVT 499 (745)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~---~~~~~t 499 (745)
+.... ..|..+.+ ......++|.+|.+++.|+|+|+|.|..|.|.+|. .+.+++
T Consensus 239 r~~~~--~~W~~~~~-~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 239 RAERS--KTFTTWMV-KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp EETTC--SCCEEEEC-GGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred EeCCC--CCCEEEcc-cCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 87754 34444444 44567899999999999999999999988776654 455554
No 228
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.84 E-value=1.5e-20 Score=176.88 Aligned_cols=170 Identities=17% Similarity=0.198 Sum_probs=125.9
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCCCCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVEFSDQ 99 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~~~d~ 99 (745)
+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ....++.... ...+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 344578889999999999999999988899999843 221 1124555432 234899999999999
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEeccCC-CCCC
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPISQA-PPNP 173 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~~~~-~~~~ 173 (745)
|.|+|.+.+..+......+.|.|.. +|.+...+......+|+.++|.|.+.| .|.+ .++|+|+|..+... ....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 163 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW 163 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecC
Confidence 9999999987665444445677765 677766554444558999999999987 5665 89999999988744 1000
Q ss_pred c-------eeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 174 R-------RKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 174 ~-------~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
. .....+.|.|.++..+|+|.|+|.|.|....
T Consensus 164 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 164 TDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 0 0111248999999999999999999998654
No 229
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.84 E-value=1.8e-20 Score=173.48 Aligned_cols=169 Identities=16% Similarity=0.235 Sum_probs=117.1
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
..+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|+|..+.............+.|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 346788888874 7899999999999988665 99999999877532111112234568999999999999999999998
Q ss_pred CceEE--EEEEEEEeec--CCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEE--Ee----ecCcE
Q psy11701 203 LGYVY--KDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--IL----ETGDL 272 (745)
Q Consensus 203 ~g~~~--~~~~l~v~~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~--~~----~~~~l 272 (745)
.|... ..+.|.|... +|.+...+ ...+.+|+.++|.|.+.+.| +.+.|++++..+...... .. ..+.|
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L 158 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALF 158 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEE
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEE
Confidence 76432 3466777642 45555444 35788999999999999988 899999999876432211 11 12579
Q ss_pred EEcccCCCCCEEEEEEEEeCCce
Q psy11701 273 KITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 273 ~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.|.+++.+|+|.|+|.|.|..+.
T Consensus 159 ~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 159 PVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp ECCCCBTTBCEEEEEEEEETTEE
T ss_pred EeeecCcccCeeEEEEEEccCCC
Confidence 99999999999999999987653
No 230
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.84 E-value=1.3e-20 Score=176.76 Aligned_cols=180 Identities=12% Similarity=0.166 Sum_probs=130.5
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCc--eEEEccCCCCCCEEEEEEEEe
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
.+|.|...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+.............. .|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 85 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRI 85 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEc
Confidence 4677888877 47899999999999987 6789999999876542111000112234 899999999999999999999
Q ss_pred CCceEEE--EEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEccc
Q psy11701 202 SLGYVYK--DVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDV 277 (745)
Q Consensus 202 ~~g~~~~--~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~ 277 (745)
..|.... .+.|.|.. .+|.+...+ ...+.+|++++|.|.+.+.+.+.+.|++++..+..........+.|.|.++
T Consensus 86 ~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v 164 (218)
T 1uct_A 86 GHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPV 164 (218)
T ss_dssp TTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSC
T ss_pred CCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccC
Confidence 8764332 36666654 356666555 457889999999997666777899999999876543332234567999999
Q ss_pred CCCCCEEEEEEEEeCCc-----eEEEEEEEEEee
Q psy11701 278 AFADSGEYTCFARNKLG-----TAQGSGSLTVKE 306 (745)
Q Consensus 278 ~~~d~G~Y~C~~~n~~g-----~~~~~~~l~v~~ 306 (745)
+.+|+|.|+|.|.|... ..+..+.|.|..
T Consensus 165 ~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 165 DLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp CGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred CcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 99999999999997632 123445666654
No 231
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.84 E-value=1.5e-20 Score=177.15 Aligned_cols=176 Identities=23% Similarity=0.359 Sum_probs=134.6
Q ss_pred cCceeEeeCCCeEEEEEEEeecC----CCeEEEEe----------------CCEeccC--CCCCCceee-------cCce
Q psy11701 131 EPEFINAAEEETVTFECKASGLP----EPEIHWVH----------------NGKPISQ--APPNPRRKV-------GPNR 181 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p----~~~v~W~~----------------~g~~~~~--~~~~~~~~~-------~~~~ 181 (745)
.+....+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.. .....+... .+..
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34566789999999999998866 46999998 4444431 111223322 3468
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCC--EE
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQ--KE 258 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~--~~ 258 (745)
|.|.+++.+|+|.|+|.+.+..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++ ..
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~ 164 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV-KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQT 164 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEc-CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCc
Confidence 99999999999999999999999888888898875 4554444334457789999999999 88899999999953 33
Q ss_pred ccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy11701 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307 (745)
Q Consensus 259 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~ 307 (745)
+..........+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 165 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 165 MPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred cCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 3332222234568999999999999999999999999988888888743
No 232
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.84 E-value=5.6e-21 Score=174.76 Aligned_cols=145 Identities=20% Similarity=0.370 Sum_probs=110.2
Q ss_pred eeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEcc-CCCCCCEEEEEEEEeCCeeeEEEEEEEE
Q psy11701 43 EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVSNGVGEAKSYSIDLS 121 (745)
Q Consensus 43 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~~~~g~~~~~~~~l~ 121 (745)
..+.+|++++|.|.+.+ +. .|+|+|||..|... .+++|.|.+ ++.+|+|.|+|.|.|..|... ..+.+.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~-~~~~~~ 78 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTY-LYLKAR 78 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCCC-EEECCC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcEE-EEEEEE
Confidence 34578999999999987 43 59999999998743 345799999 999999999999998877633 334444
Q ss_pred EEe--cCeE----------------Eec--C--ce---eEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCcee
Q psy11701 122 VLA--APYF----------------TVE--P--EF---INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK 176 (745)
Q Consensus 122 V~~--~p~~----------------~~~--~--~~---~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~ 176 (745)
|.. ++.. ... + .. ..+.+|+++.|.|.+ |.+.++|+|+|..+....
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~------ 149 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN------ 149 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSS------
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccC------
Confidence 332 2210 000 0 00 234499999999988 788999999999987322
Q ss_pred ecCceEEEccCCCCCCEEEEEEEEeCCceE
Q psy11701 177 VGPNRITIENLRKSDTGNYGCNATNSLGYV 206 (745)
Q Consensus 177 ~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~ 206 (745)
...+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 150 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 150 ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 156789999999999999999999988765
No 233
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=1.9e-20 Score=173.77 Aligned_cols=167 Identities=17% Similarity=0.215 Sum_probs=122.5
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|+|..+...............|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 46778777774 7899999999999998765 799999998774211111223456799999999999999999999987
Q ss_pred -ce--EEEEEEEEEeec--CCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEE--Eee----cCcE
Q psy11701 204 -GY--VYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILE----TGDL 272 (745)
Q Consensus 204 -g~--~~~~~~l~v~~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~--~~~----~~~l 272 (745)
|. ....+.|.|... +|.+...+ ...+.+|++++|.|.+.+. .+.+.|++++..+...... ... .+.|
T Consensus 82 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L 159 (198)
T 1ugn_A 82 AGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIF 159 (198)
T ss_dssp TEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEE
T ss_pred CCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEE
Confidence 52 234567777652 35554444 3678899999999999887 6799999999876432221 111 3579
Q ss_pred EEcccCCCCCEEEEEEEEeCCc
Q psy11701 273 KITDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 273 ~i~~~~~~d~G~Y~C~~~n~~g 294 (745)
.|.+++.+|+|.|+|.|.|..+
T Consensus 160 ~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 160 SVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EECCCCTTSCEEEEEEEECTTS
T ss_pred EecccCcccCeEEEEEEEeCCC
Confidence 9999999999999999999865
No 234
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.84 E-value=2.4e-20 Score=174.92 Aligned_cols=168 Identities=14% Similarity=0.213 Sum_probs=123.1
Q ss_pred eeccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEec------------CCCCCeEecc--CCcEEEEccCCCCCCEE
Q psy11701 38 VTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPI------------NPSDRISQGN--YGKSLIIKHVEFSDQGS 101 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i------------~~~~~~~~~~--~~~~L~i~~~~~~d~G~ 101 (745)
..|....+.+|++++|.|.+.+.|.+.+.|+|+ +..+ ....++.... ...+|.|.+++.+|+|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (210)
T 1lk3_L 5 TQPPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAI 84 (210)
T ss_dssp ECCSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ECCCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeE
Confidence 337888999999999999999988889999984 2222 1124555432 23489999999999999
Q ss_pred EEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEeccCC-CCC-Cc
Q psy11701 102 YTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPISQA-PPN-PR 174 (745)
Q Consensus 102 Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~~~~-~~~-~~ 174 (745)
|+|.+.+..+........|.|.. +|.+...+....+.+|+.++|.|.+.| .|.+ .+.|+|+|..+... ... ..
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 164 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTD 164 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECC
T ss_pred EEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCC
Confidence 99999987664443345677765 577766554444558999999999987 4554 89999999988644 100 00
Q ss_pred ------eeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 175 ------RKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 175 ------~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
.....+.|.|.++..+|+|.|+|.|.|....
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 165 QDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred ccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 0111237999999999999999999997653
No 235
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.83 E-value=9.4e-20 Score=170.46 Aligned_cols=196 Identities=14% Similarity=0.153 Sum_probs=134.0
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEE
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 581 (745)
.+|++|.++++.....+++.++|+++.+.++ .++|.|+|+......+....... ........+.+.+|.+++.|.|+
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~-~~~Y~l~y~~~~~~~~~~c~~~~--~~~~~~c~~~~~~l~~~~~Y~~~ 78 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGL-PTNYSLTYHREGETLMHECPDYI--TGGPNSCHFGKQYTSMWRTYIMM 78 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCC-CSEEEEEEEETTCCCCEECSCSS--TTCTTEEEECGGGCCSSSCEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCC-CceEEEEEEECCCCccccCCCCC--CCCCeEEEeCCCCcccceeEEEE
Confidence 4789999999999999999999999887554 47999999976543332221100 00123344556789999999999
Q ss_pred EEEEecCCCCCCcceeeecccC----CCCCCCCCC----CCCcceeEEEeecCcccc-CC-CcceEEEEEeccCCCCCCC
Q psy11701 582 LAGYTKAGDGAESKYLFYVPFK----NPDNVEGRG----STPNNLVISWTAMPEIEH-NA-PHFKYRIFWRRHNTGEAWN 651 (745)
Q Consensus 582 V~a~n~~G~g~~S~~~~~~~~~----~~~~~~~~~----~~p~~~~v~W~~~~~~~~-~g-~i~~y~i~~~~~~~~~~~~ 651 (745)
|.|.|..|.+.++......... +|..+.+.. ..+++|.|+|++|..... +| .+..|.|+|+..+.. .+
T Consensus 79 V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~-~~- 156 (210)
T 3n06_B 79 VNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA-EW- 156 (210)
T ss_dssp EEEEETTEEEECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS-SC-
T ss_pred EEEEcCCCCeeCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC-CC-
Confidence 9999999988543332211111 111122211 135788899987765442 35 458899988865221 11
Q ss_pred ccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCccc-CCC
Q psy11701 652 QDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN-GPP 730 (745)
Q Consensus 652 ~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~-g~~ 730 (745)
. . ...+..+.+.|.+|.|++.|.|+|+|.+..|. |+|
T Consensus 157 -----------------------~------------------~-~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~w 194 (210)
T 3n06_B 157 -----------------------E------------------I-HFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAW 194 (210)
T ss_dssp -----------------------E------------------E-EEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCC
T ss_pred -----------------------E------------------E-EeccCceEEEEeccCCCCEEEEEEEEecCCCcccCC
Confidence 0 0 01235678999999999999999999999998 999
Q ss_pred CcceEEeCCCCCcC
Q psy11701 731 SEIISFVTPEGGTK 744 (745)
Q Consensus 731 s~~~~~~t~~~~~~ 744 (745)
|+++.|+|+++.++
T Consensus 195 S~~~~~~Tp~~~~~ 208 (210)
T 3n06_B 195 SPATFIQIPSDFTM 208 (210)
T ss_dssp CCCEEEECCTTC--
T ss_pred CCceeEECcCCCcc
Confidence 99999999999865
No 236
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.83 E-value=1.8e-19 Score=171.19 Aligned_cols=172 Identities=20% Similarity=0.251 Sum_probs=119.4
Q ss_pred cceeEecCCcEEEEEEEeecCCC---eeEEEECCEe-----------cCC------CCCeEec-----cCCcEEEEccCC
Q psy11701 41 KKEVALRNKKVELFCIFGGTPLP---QTIWSKDGVP-----------INP------SDRISQG-----NYGKSLIIKHVE 95 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~-----------i~~------~~~~~~~-----~~~~~L~i~~~~ 95 (745)
+.+.+.+|++++|.|.+.+.+.+ .|.|+|++.. +.. ..|+... ....+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 44778999999999999876544 6999986532 111 1223221 223589999999
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEee-cCCCeEEEEeCCEeccCCCCCCc
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG-LPEPEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~g~~~~~~~~~~~ 174 (745)
.+|+|.|+|.|.+..|... . .+.+...+.+...+....+.+|+.+.|.|.+.| .|.+.++|+|++..+........
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~-~--~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEK-A--LVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp GGGCEEEEEEEEETTEEEE-E--EEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred hHHCeeEEEEEECCCcEEE-E--EEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE
Confidence 9999999999999877655 3 344444444445555667889999999999988 59999999996544332222222
Q ss_pred eeecCce---EEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 175 RKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 175 ~~~~~~~---L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
....++. +.+.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred EECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 2233332 3455788999999999999999998888888775
No 237
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.83 E-value=4.7e-20 Score=171.35 Aligned_cols=164 Identities=15% Similarity=0.216 Sum_probs=118.2
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCC---eEeccCCcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
+.+...|. ..+.+|++++|.|.+. .+.+.+.|+|+|..+....+ ......+..|.|.+++.+|+|.|+|.+.+..
T Consensus 9 P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~ 86 (201)
T 1nkr_A 9 PSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTH 86 (201)
T ss_dssp CEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTT
T ss_pred CeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCC
Confidence 33445555 7799999999999997 46779999999876642111 1112234689999999999999999998642
Q ss_pred e----eeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee--cCce
Q psy11701 111 G----EAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV--GPNR 181 (745)
Q Consensus 111 g----~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~~ 181 (745)
. ...+..+.|.|.. +|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+........... ....
T Consensus 87 ~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 164 (201)
T 1nkr_A 87 SPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQAD 164 (201)
T ss_dssp BTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEE
T ss_pred CCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEE
Confidence 1 2233556777764 467776665 47899999999999986 5679999999987652111000111 1468
Q ss_pred EEEccCCCCCCEEEEEEEEeCC
Q psy11701 182 ITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
|.|.+++ |+|.|+|.|.+..
T Consensus 165 L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 165 FPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEECC--SCEEEEEEEEETT
T ss_pred EEeCCcC--CCeeEEEEEEcCC
Confidence 9999998 9999999998763
No 238
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.83 E-value=6.1e-20 Score=172.54 Aligned_cols=170 Identities=17% Similarity=0.255 Sum_probs=123.6
Q ss_pred eccceeEecCCcEEEEEEEeecC---CCeeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCCCCCC
Q psy11701 39 TRKKEVALRNKKVELFCIFGGTP---LPQTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVEFSDQ 99 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~g~p---~~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~~~d~ 99 (745)
.|....+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....|+.... ...+|.|.+++.+|+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 85 (212)
T 1q0x_L 6 QESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDE 85 (212)
T ss_dssp ECSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCC
Confidence 37888999999999999998877 4789999852 222 1134555432 334899999999999
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCEeccCCCCCC
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGKPISQAPPNP 173 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~~~~~~~~~~ 173 (745)
|.|+|.+.+..+......+.|.|. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+|+|..+.......
T Consensus 86 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 165 (212)
T 1q0x_L 86 AIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETT 165 (212)
T ss_dssp EEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecC
Confidence 999999998766444344566773 46777665554445679999999999885 443 899999999886432111
Q ss_pred c-eee------cCceEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy11701 174 R-RKV------GPNRITIENLRKSDTGNYGCNATNSLGYVYK 208 (745)
Q Consensus 174 ~-~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~ 208 (745)
. ... ..+.|.|.++..+|+|.|+|.|.|.......
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 166 QPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 1 111 1236899999999999999999998765433
No 239
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.83 E-value=7.3e-20 Score=173.53 Aligned_cols=176 Identities=15% Similarity=0.196 Sum_probs=124.3
Q ss_pred eccceeEecCCcEEEEEEEeecCC-----CeeEEEECCEecC---------C------CCCeEecc-----CCcEEEEcc
Q psy11701 39 TRKKEVALRNKKVELFCIFGGTPL-----PQTIWSKDGVPIN---------P------SDRISQGN-----YGKSLIIKH 93 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~g~p~-----~~v~W~~~~~~i~---------~------~~~~~~~~-----~~~~L~i~~ 93 (745)
++..+.+.+|++++|.|.+.+.|. +.+.|+|++..+. . ..+..+.. ...+|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 445567999999999999987763 3899999763321 1 13343321 234899999
Q ss_pred CCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC-CEeccCCCCC
Q psy11701 94 VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GKPISQAPPN 172 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~-g~~~~~~~~~ 172 (745)
++.+|+|.|+|.+.+ .+. ....+.|.|..+|.....+....+.+|+.+.|.|.+.|.|.+.+.|+++ |..+......
T Consensus 87 v~~~D~G~Y~C~~~~-~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGA-DYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp CCGGGCEEEEEEEES-SSE-EEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEE
T ss_pred cccccCeEEEEEEEe-CCC-ceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccce
Confidence 999999999999998 343 3466888898776543333333678999999999999999999999998 6555421110
Q ss_pred CceeecCceEE---EccCCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 173 PRRKVGPNRIT---IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 173 ~~~~~~~~~L~---i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
......++.+. +..+..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecC
Confidence 01111122222 224567899999999999999999888888864
No 240
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=2.8e-20 Score=170.74 Aligned_cols=165 Identities=18% Similarity=0.313 Sum_probs=122.7
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
+|.+...|.. .+.+|++++|.|.+.+ +...+.|+|+|..+...............|.|.+++.+|+|.|+|.+.|..+
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 5777777776 7999999999999876 4568999999987752111111223456899999999999999999998755
Q ss_pred eE--EEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCC
Q psy11701 205 YV--YKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280 (745)
Q Consensus 205 ~~--~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 280 (745)
.. ...+.|.|.. .+|.+...+ ...+.+|++++|.|.+.+ +.+.+.|++++..+..........+.|.|.+++.+
T Consensus 82 ~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~ 159 (188)
T 1oll_A 82 WSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTA 159 (188)
T ss_dssp ECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGG
T ss_pred CCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCCCcC
Confidence 33 2345666653 256666555 456889999999999865 45689999998765432222233457999999999
Q ss_pred CCEEEEEEEEeCC
Q psy11701 281 DSGEYTCFARNKL 293 (745)
Q Consensus 281 d~G~Y~C~~~n~~ 293 (745)
|+|.|+|.|.|..
T Consensus 160 d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 160 HRGTYRCFGSYNN 172 (188)
T ss_dssp GCEEEEEECEEET
T ss_pred CCcEEEEEEEcCC
Confidence 9999999998764
No 241
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.82 E-value=3.5e-20 Score=169.37 Aligned_cols=159 Identities=17% Similarity=0.232 Sum_probs=124.6
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
..+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|.. .....+.|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~---------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS---------RYQDQAVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC---------CEESSSEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc---------ccCcccEEEECcCChhhCceEEEEEEcC
Confidence 357778777775 7899999999999987 7789999999865 2345679999999999999999999998
Q ss_pred CceE--EEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccC
Q psy11701 203 LGYV--YKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278 (745)
Q Consensus 203 ~g~~--~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 278 (745)
.|.. ...+.|.|.. .+|.+...+ ...+.+|++++|.|.+.+.+ +.+.|++++..+..........+.|.|.+++
T Consensus 75 ~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~ 152 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPERWYRASFPIITVT 152 (184)
T ss_dssp TEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCEEEEESSSEEEET
T ss_pred CCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCCCceEEEEEccCC
Confidence 7642 2335666643 255666555 45677899999999987654 6899999998775432223345679999999
Q ss_pred CCCCEEEEEEEEeCCc
Q psy11701 279 FADSGEYTCFARNKLG 294 (745)
Q Consensus 279 ~~d~G~Y~C~~~n~~g 294 (745)
.+|+|.|+|.|.|..+
T Consensus 153 ~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 153 AAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TCCSEEEEEEEECTTS
T ss_pred ccCCeEEEEEEEeCCC
Confidence 9999999999999754
No 242
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.82 E-value=7e-20 Score=172.32 Aligned_cols=165 Identities=16% Similarity=0.230 Sum_probs=122.7
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCCCCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVEFSDQ 99 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~~~d~ 99 (745)
+...|..+.+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....++.... ...+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3nl4_L 4 MTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADA 83 (213)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHC
Confidence 345577889999999999999999889999999842 111 0124554432 234799999999999
Q ss_pred EEEEEEEEeCCee--eEEEEEEEEE---EecCeEEecCceeEeeCCCeEEEEEEEee-cCCCeEEEEeCCEeccCCC---
Q psy11701 100 GSYTCEVSNGVGE--AKSYSIDLSV---LAAPYFTVEPEFINAAEEETVTFECKASG-LPEPEIHWVHNGKPISQAP--- 170 (745)
Q Consensus 100 G~Y~C~~~~~~g~--~~~~~~~l~V---~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~g~~~~~~~--- 170 (745)
|.|+|.+.+..+. .......|.| ..+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|+|+|..+....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~ 163 (213)
T 3nl4_L 84 ATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENS 163 (213)
T ss_dssp EEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEE
T ss_pred EEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecc
Confidence 9999999886553 3333455666 45666766665556778999999999988 8989999999999886421
Q ss_pred -----CCCceeecCceEEEccCCCCCCEEEEEEEE
Q psy11701 171 -----PNPRRKVGPNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 171 -----~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
.........+.|.|.++..+|+|.|+|.|.
T Consensus 164 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 164 KTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 011111123579999999999999999999
No 243
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.82 E-value=1.5e-19 Score=168.37 Aligned_cols=172 Identities=17% Similarity=0.178 Sum_probs=124.3
Q ss_pred cCceeEeeCCCeEEEEEEEeecCC-----CeEEEEeCCEeccCCCCCCceee-----cCceEEEccCCCCCCEEEEEEEE
Q psy11701 131 EPEFINAAEEETVTFECKASGLPE-----PEIHWVHNGKPISQAPPNPRRKV-----GPNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p~-----~~v~W~~~g~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
.+....+.+|+++.|.|.+.+.|. +.+.|+|++..+........... +...|.|.+++.+|+|.|+|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 445678899999999999998776 79999994443322111111111 33689999999999999999999
Q ss_pred eCCceEEEEEEEEEeecC--CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecC---cEEEc
Q psy11701 201 NSLGYVYKDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG---DLKIT 275 (745)
Q Consensus 201 ~~~g~~~~~~~l~v~~~~--p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~---~l~i~ 275 (745)
|..+.....+.|.|...+ |.+.. ..+.+|+.+.|.|.+.|.|.+.+.|++++..+.. .......+ .+.+.
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~i~ 162 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT-SHIRTPEGLYQVTSVL 162 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE-EEEECTTSCEEEEEEE
T ss_pred eCCCcceEEEEEEecCCCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccC-ceeeCCCCCEEEEEEE
Confidence 999888778888887532 22211 2345799999999999999999999998765532 12222223 35667
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy11701 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307 (745)
Q Consensus 276 ~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~ 307 (745)
.+...|.|.|+|.|.|..|.....+.|.|..+
T Consensus 163 ~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 163 RLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 88889999999999999999888888877554
No 244
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.82 E-value=3.1e-20 Score=177.34 Aligned_cols=165 Identities=20% Similarity=0.342 Sum_probs=123.8
Q ss_pred EeeccceeEecCCcEEEEEEEeecCC-CeeEEEECCEecC---------C----CCCeE----------eccCCcEEEEc
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPL-PQTIWSKDGVPIN---------P----SDRIS----------QGNYGKSLIIK 92 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~-~~v~W~~~~~~i~---------~----~~~~~----------~~~~~~~L~i~ 92 (745)
+..|.+..+.+|++++|.|.+.+.|. +.+.|+|++.... . ..++. +...+ .|.|.
T Consensus 4 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~-~L~i~ 82 (231)
T 2pet_A 4 LSVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG-RLVLA 82 (231)
T ss_dssp CCCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC-CEEES
T ss_pred ccCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc-eEEEc
Confidence 45677888999999999999998885 8999998654321 0 11222 33333 49999
Q ss_pred cCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecC---eEEecCceeEeeCCCeE-EEEEEE-eecCCCeEEEEeCCEecc
Q psy11701 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP---YFTVEPEFINAAEEETV-TFECKA-SGLPEPEIHWVHNGKPIS 167 (745)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p---~~~~~~~~~~v~~G~~~-~l~C~~-~~~p~~~v~W~~~g~~~~ 167 (745)
+++.+|+|.|+|.+.+..+...+..+.|.|..+| .+...+....+.+|+.+ .|.|.+ .+.|.+.+.|+++|..+.
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~ 162 (231)
T 2pet_A 83 EAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLE 162 (231)
T ss_dssp SCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred ccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCc
Confidence 9999999999999998763344577889998774 45556666677899998 999999 889999999999999987
Q ss_pred CCCC-CCceeec-------------CceEEEccCCCCCCEEEEEEEEeC
Q psy11701 168 QAPP-NPRRKVG-------------PNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 168 ~~~~-~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.... ..+.... .+.|.|.....+|+|.|+|.|.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 163 VPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 5441 1111111 156888766666799999999994
No 245
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=6.4e-19 Score=161.39 Aligned_cols=162 Identities=17% Similarity=0.365 Sum_probs=127.9
Q ss_pred eEeeCCCeEEEEEEEeecCCC--eEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 135 INAAEEETVTFECKASGLPEP--EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212 (745)
Q Consensus 135 ~~v~~G~~~~l~C~~~~~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l 212 (745)
..+.+|+++.|.|.+.+.|.+ .+.|+|+|..+...... .....|.|. +.+|+|.|+|.+.|.. ...+.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~----~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~l 78 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP----GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTANI 78 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC----CSEEEEEEC--GGGCCEEEEEEEESTT---SCEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc----CCcEEEEEe--chhhCeEEEEEEECCc---CcEEEE
Confidence 357899999999999887666 99999999988744321 123356666 6899999999999832 245677
Q ss_pred EEeecCCeeeeCCCceEEecCceEEEEEEEeecC-CCeEEEee---CCE-Ecc---CceEEEeecC---cEEEcccC-CC
Q psy11701 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP-KPEVNWIH---NQK-ELT---GGRYTILETG---DLKITDVA-FA 280 (745)
Q Consensus 213 ~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p-~~~i~W~~---~~~-~~~---~~~~~~~~~~---~l~i~~~~-~~ 280 (745)
.|. .+|.+...+....+.+|+.++|.|.+.+.| .+.+.|++ ++. .+. ..++.+...+ .|.|.++. ..
T Consensus 79 ~V~-~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~ 157 (184)
T 3b5h_A 79 QLH-GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 157 (184)
T ss_dssp EEC-CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTT
T ss_pred EEe-cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccc
Confidence 776 478888888777899999999999999999 78999999 443 332 2556655444 79999999 89
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 281 DSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 281 d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
|.|.|+|.|.|..|.....+.|.|..
T Consensus 158 d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 158 DPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp SSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCceEEEEEEeCCCcceEEEEEEEec
Confidence 99999999999999988888888753
No 246
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.82 E-value=7.2e-20 Score=177.00 Aligned_cols=183 Identities=15% Similarity=0.198 Sum_probs=131.2
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEecC-----------------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPIN-----------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i~-----------------~~~~~~~~~----~~~~L~ 90 (745)
.+..|....+.+|++++|.|.+.|.| .+.+.|+|+ +..+. ...|+.+.. ...+|.
T Consensus 3 ~l~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (256)
T 1nqb_A 3 QLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQ 82 (256)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEE
Confidence 45667788999999999999998875 679999994 22210 124555432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCee----eEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCC-----eEEEEe
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGE----AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP-----EIHWVH 161 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~----~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~-----~v~W~~ 161 (745)
|.+++.+|+|.|+|.+.+..|. .....+.|.|..+|.+...|....+.+|++++|.|.+.+.|.+ .+.|+|
T Consensus 83 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 83 LSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp ECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 9999999999999999987552 2224467888888888888888899999999999999887764 999999
Q ss_pred --CCEeccC---------CCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEE-EEEEEEEeecC
Q psy11701 162 --NGKPISQ---------APPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHA 218 (745)
Q Consensus 162 --~g~~~~~---------~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v~~~~ 218 (745)
+|..+.. .....++.. ....|.|.+++.+|+|.|+|.+.+...... ....|.|...+
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 163 QKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp ECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred ECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 5654310 011122221 235799999999999999999987543222 22456665433
No 247
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=7.6e-20 Score=174.06 Aligned_cols=176 Identities=15% Similarity=0.181 Sum_probs=126.9
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCC-CCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCee
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 112 (745)
+.+...|.. .+.+|++|+|.|.+.+ +...+.|+|+|..+... .+.........|.|.+++.+|+|.|+|.+.+..+.
T Consensus 8 P~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~ 85 (242)
T 1p6f_A 8 PFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELW 85 (242)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCcc
Confidence 344556665 8999999999999874 45689999999876421 11111233458999999999999999999876443
Q ss_pred -eEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCC
Q psy11701 113 -AKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188 (745)
Q Consensus 113 -~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (745)
..+..+.|.|.. +|.+...|. ..+.+|++++|.|.+.+. .+.+.|+|+|..+... .........|.|.+++
T Consensus 86 s~~S~~~~L~V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~---~~~~~~~~~l~I~~v~ 160 (242)
T 1p6f_A 86 SEPSNLLDLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ---RGYGKVQAEFPLGPVT 160 (242)
T ss_dssp CCCCCCEEEEEECCSCCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE---EEECSSEEEEEEEECC
T ss_pred ccCCcceEEEeecccCCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc---ccCCCceEEEEeCCCc
Confidence 234557777764 677776664 468999999999998764 4599999999766520 0112234689999999
Q ss_pred CCCCEEEEEEEEeCCc---eEEEEEEEEEee
Q psy11701 189 KSDTGNYGCNATNSLG---YVYKDVYVNVLA 216 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g---~~~~~~~l~v~~ 216 (745)
.+|+|.|+|.+.|... ..+..+.|.|..
T Consensus 161 ~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 161 TAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp GGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred cccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 9999999999998641 223346666664
No 248
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.82 E-value=3e-20 Score=179.56 Aligned_cols=258 Identities=13% Similarity=0.137 Sum_probs=112.3
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCC-eeEEEECCEecCCCCCe-EeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLP-QTIWSKDGVPINPSDRI-SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~-~v~W~~~~~~i~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~ 114 (745)
.+.|++..|.+|++++|+|.+.. +.+ .+.|.- .+. .... ..+.....|.|.+++.+ |.|+|++. ..|...
T Consensus 3 ~v~P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t---~l~-~~~~~~~g~~~~~~~l~~v~~~--~~y~C~~~-~~~~~~ 74 (291)
T 1mq8_A 3 SVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIET---PLP-KKELLLPGNNRKVYELSNVQED--SQPMCYSN-CPDGQS 74 (291)
T ss_dssp EEECSEEEECTTCEEEEEEEECC-SSCSEEEEEC---SSC-CCCCCCSCSSEEEEEEESCCSC--CCCEEEEE-CSSCEE
T ss_pred EEeCCccEEcCCCeEEEEEeCCC-CCCccceEEe---cCC-CcccccCCCceEEEEEEecccC--CeEEEEEE-cCCccE
Confidence 35677889999999999999964 445 488853 111 1111 11112235888888854 46999996 445666
Q ss_pred EEEEEEEEEecCeE-EecCceeEeeCCCeEEEEEEEee-cCCC--eEEEEeCCEeccCCCCCCceeecCceEEEccCCCC
Q psy11701 115 SYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASG-LPEP--EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190 (745)
Q Consensus 115 ~~~~~l~V~~~p~~-~~~~~~~~v~~G~~~~l~C~~~~-~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~ 190 (745)
+..+.|.|..+|.- .+.+....+.+|+.++|.|.+.+ .|.. .|+|+|+++.+...... .......|.+.....+
T Consensus 75 ~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~--~~~~~~~l~~~~~~~D 152 (291)
T 1mq8_A 75 TAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV--GEPAEVTTTVLVRRDH 152 (291)
T ss_dssp EEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC--BTTEEEEEECCCSSSC
T ss_pred EEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC--CCCceEEEEeeeeecc
Confidence 78889999988754 23333345889999999999977 4544 58999999887633211 0112246777777777
Q ss_pred CCEEEEEEEEeCCce--------EEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCC---eEEEeeCCEEc
Q psy11701 191 DTGNYGCNATNSLGY--------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP---EVNWIHNQKEL 259 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~--------~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~---~i~W~~~~~~~ 259 (745)
|.+.|+|+|.+..+. .+....+.|...|+..........+.+|+.++|.|.+.|.+++ .+.|.+++..+
T Consensus 153 ~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l 232 (291)
T 1mq8_A 153 HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL 232 (291)
T ss_dssp SSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------------------------
T ss_pred CCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEec
Confidence 777999999986542 2233567776544331111112357789999999999997554 59999999887
Q ss_pred cCceEEEeecCcEEEccc---CCC--CCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 260 TGGRYTILETGDLKITDV---AFA--DSGEYTCFARNKLGTAQGSGSLTVKE 306 (745)
Q Consensus 260 ~~~~~~~~~~~~l~i~~~---~~~--d~G~Y~C~~~n~~g~~~~~~~l~v~~ 306 (745)
.... ....+.+.+... ..+ +.+.|+|.+.+..........|.|..
T Consensus 233 ~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~ 282 (291)
T 1mq8_A 233 NPTV--TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (291)
T ss_dssp ----------------------------------------------------
T ss_pred Ccee--eecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc
Confidence 6432 112233433333 233 35677788887544455666677755
No 249
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.82 E-value=1.3e-18 Score=163.79 Aligned_cols=189 Identities=18% Similarity=0.169 Sum_probs=150.2
Q ss_pred cceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEc---CCeEEEEecCCCCCCEEEEEEE
Q psy11701 307 HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS---NDYSLTVTKSSELDSGQYTCRA 383 (745)
Q Consensus 307 ~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a 383 (745)
+|.+ ..|....+..|+.+.|.|.+.+.|. +.+.|++++..+......++... ....|.|..+...|.|.|+|.|
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPS--ATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESC--CEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCC--CEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 4555 4666688899999999999999987 68999999998875433344333 3568999999999999999999
Q ss_pred EeCCceEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEc-cCce
Q psy11701 384 QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN-KGES 462 (745)
Q Consensus 384 ~n~~g~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~-~~~~ 462 (745)
.|..|.....+.+.+..+|.+|..+.+. ....++.|.|.++ ....+.++.+|.|+|+......+........ ....
T Consensus 96 ~n~~g~~~~~~~l~v~~~P~~p~~~~~~--~~~~~~~l~w~~p-~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~ 172 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADTPSSPSIDQVE--PYSSTAQVQFDEP-EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172 (215)
T ss_dssp ECSSCEEEEEEEEEECCCCCCCEEEEEE--EETTEEEEEEECC-SCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHH
T ss_pred EECCCceEEEEEEEECCCCCCCcceEEE--EecceEEEEEecC-CccCCCceEEEEEEEEECCCCccccccccccccccc
Confidence 9999999999999999999999877763 5678899999974 3345668999999888766543222222221 1223
Q ss_pred eEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCCC
Q psy11701 463 TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501 (745)
Q Consensus 463 ~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~ 501 (745)
..++|.+|.+++.|.|+|.|.|..|.|.+|..+.++|.+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 789999999999999999999999999999999988753
No 250
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=171.79 Aligned_cols=178 Identities=17% Similarity=0.266 Sum_probs=130.1
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCC---eeEEEECCEecCCC------------------CCeEec-----cCCcEEE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLP---QTIWSKDGVPINPS------------------DRISQG-----NYGKSLI 90 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~i~~~------------------~~~~~~-----~~~~~L~ 90 (745)
+..|+.+.+.+|++++|.|.+.+.|.+ .|.|+|++..+... .++.+. ....+|.
T Consensus 3 l~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~ 82 (218)
T 4frw_A 3 LETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVL 82 (218)
T ss_dssp EECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEE
T ss_pred EeCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEE
Confidence 345677889999999999999988766 48999987654321 122221 1234799
Q ss_pred EccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCe-EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPY-FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~-~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~ 169 (745)
|.+++.+|+|.|.|.+.+..+........+.+..++. ....+....+..|+.+.|.|.+.+.|.+.++|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 83 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred EeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 9999999999999999876555554555555655443 344455667788999999999999999999999998876532
Q ss_pred CCC--CceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 170 PPN--PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 170 ~~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
... .......+.|.|.++..+|+|.|+|.|.|..|.....+.+.|
T Consensus 163 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 163 RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 110 111122357999999999999999999999887665554443
No 251
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.82 E-value=2.1e-20 Score=175.48 Aligned_cols=173 Identities=27% Similarity=0.463 Sum_probs=135.2
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEecc---------CCCCCCceeecCceEEEccCCCCCCEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS---------QAPPNPRRKVGPNRITIENLRKSDTGNY 195 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~---------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 195 (745)
++.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+. ......+.......|.|.+++.+|+|.|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y 83 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTY 83 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEE
Confidence 4456667888889999999999999998889999999876521 1122334445558999999999999999
Q ss_pred EEEEEeCCc--eEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEccCce---------
Q psy11701 196 GCNATNSLG--YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGR--------- 263 (745)
Q Consensus 196 ~C~~~~~~g--~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~--------- 263 (745)
+|.+.+..| .....+.|.|.. +|.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+....
T Consensus 84 ~C~~~~~~g~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 162 (209)
T 1nbq_A 84 TCMVSEEGGNSYGEVKVKLIVLV-PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNS 162 (209)
T ss_dssp EEEEEETTSSCEECCEEECCEEB-CCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTC
T ss_pred EEEEecCCCCccceEEEEEEEec-CCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeecc
Confidence 999999865 334456677764 6666555666678999999999996 888999999999988765321
Q ss_pred -EEE-eecCcEEEcccCCCCCEEEEEEEEeCCceEEE
Q psy11701 264 -YTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQG 298 (745)
Q Consensus 264 -~~~-~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 298 (745)
+.. ...+.|.|.++..+|.|.|+|.|.|..|....
T Consensus 163 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 199 (209)
T 1nbq_A 163 SYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMT 199 (209)
T ss_dssp CCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEE
T ss_pred ceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccc
Confidence 111 13458999999999999999999999988733
No 252
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.81 E-value=3.9e-20 Score=188.10 Aligned_cols=200 Identities=19% Similarity=0.288 Sum_probs=157.2
Q ss_pred CCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee
Q psy11701 98 DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~ 177 (745)
+.|.|+|.+.+... .+.+.+..+|.+...+....+.+|+++.|.|.+.|.|.+.+.|++++..+...... ....
T Consensus 136 ~~~~~~C~~~~~l~-----~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~-~~~~ 209 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-----HMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK-SGGL 209 (347)
T ss_dssp GGGCCCCSSSSCSS-----CCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC-CCCS
T ss_pred cccCCCCCCChHHh-----cCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc-ceec
Confidence 56889998865221 12233445788888888889999999999999999999999999998765422111 1223
Q ss_pred cCceEEEccCCCCCCE-EEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCC
Q psy11701 178 GPNRITIENLRKSDTG-NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256 (745)
Q Consensus 178 ~~~~L~i~~v~~~d~G-~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~ 256 (745)
..+.|.|.+++.+|+| .|+|.|.|..|.....+.|.|.. +|.+ ....+.+|+.++|.|.+.|.|.+.+.|++++
T Consensus 210 ~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~-~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g 284 (347)
T 2ifg_A 210 PSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF-PASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNG 284 (347)
T ss_dssp SEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE-EEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETT
T ss_pred ccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC-CCee----eeccCccCceEEEEEEeeecCCCcEEEEeCC
Confidence 4568999999999999 99999999999887777777764 5554 1123457999999999999999999999999
Q ss_pred EEccCceEEEe-----------ecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 257 KELTGGRYTIL-----------ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 257 ~~~~~~~~~~~-----------~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
..+....+... ..+.|.|.+++..|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 285 SVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred EECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 98875433221 24569999999999999999999999999998888887654
No 253
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=2.2e-19 Score=173.72 Aligned_cols=174 Identities=18% Similarity=0.290 Sum_probs=127.5
Q ss_pred ecCceeEeeCCCeEEEEEEEee---cCCCeEEEEeCCEecc-----C----------------------CCCCCceee--
Q psy11701 130 VEPEFINAAEEETVTFECKASG---LPEPEIHWVHNGKPIS-----Q----------------------APPNPRRKV-- 177 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~---~p~~~v~W~~~g~~~~-----~----------------------~~~~~~~~~-- 177 (745)
..+....+.+|+++.|.|.+.+ .|.+.+.|+|++.... . .....+...
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 3455778999999999999987 7888999999875430 0 011122222
Q ss_pred -cCceEEEccCCCCCCEEEEEEEEeCCce-----EEEEEEEEEeec--CCeeeeC-CCceEEecCceEEEEEEEeecCCC
Q psy11701 178 -GPNRITIENLRKSDTGNYGCNATNSLGY-----VYKDVYVNVLAH--APEITEA-PKDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 178 -~~~~L~i~~v~~~d~G~Y~C~~~~~~g~-----~~~~~~l~v~~~--~p~~~~~-~~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
++..|.|.+++.+|+|.|+|.+.+..+. ....+.|.|... +|.+... +....+.+|+.++|.|.+.+.|.+
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 2358999999999999999999987664 245677888753 3444433 445667789999999999999999
Q ss_pred eEEEeeCCEEccC-------------------------ceEEEeecCcEEEcccCCCCCEEEEEEEEeCC---ceEEEEE
Q psy11701 249 EVNWIHNQKELTG-------------------------GRYTILETGDLKITDVAFADSGEYTCFARNKL---GTAQGSG 300 (745)
Q Consensus 249 ~i~W~~~~~~~~~-------------------------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~---g~~~~~~ 300 (745)
.+.|++++..+.. .+......+.|.|.++..+|+|.|+|.|.|.. |.....+
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 9999999876643 11222233689999999999999999999954 4555555
Q ss_pred EEE
Q psy11701 301 SLT 303 (745)
Q Consensus 301 ~l~ 303 (745)
.|.
T Consensus 247 ~l~ 249 (250)
T 2fbo_J 247 ILK 249 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 254
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.81 E-value=2.4e-19 Score=168.56 Aligned_cols=196 Identities=12% Similarity=0.147 Sum_probs=140.1
Q ss_pred ccCCCCCCceeEEee-cCceeEEEEEeCCCCCcceeeeeEEEEEEeccCC----CCceeEEEE-ccCceeEEEecccccC
Q psy11701 400 VPLEAPSNFTLIQVI-DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG----EGSIRELIV-NKGESTTTEVDKFVPA 473 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~-~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~----~~~~~~~~~-~~~~~~~~~i~~L~~~ 473 (745)
.||.+|.++.+.. . ..+++.+.|+++.. .+ ....|.|.|+..... ...+..... .......+.+.+|.++
T Consensus 3 ~pP~~P~~l~c~~-~~~~~~~~~~W~p~~~--~~-~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 78 (215)
T 1cd9_B 3 YPPASPSNLSCLM-HLTTNSLVCQWEPGPE--TH-LPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLY 78 (215)
T ss_dssp CCCCCCEEEEEEE-ETTTTEEEEEEECCSC--CS-SCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTT
T ss_pred CCCCCCeeeeeec-CCCcccEEEEecCCCC--CC-CceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccc
Confidence 5789999999876 5 57899999998643 22 245799998865421 111111111 1224456778899999
Q ss_pred cceeEEEEEecCCCCCCCCcceEEeCCC-CCCCCCCceeEEEc------CCceEEEEeeCCCCCCCceeeEEEEEE-EcC
Q psy11701 474 SKNFARVLAFNGAYNGPPSEIISFVTPE-GVPGTVQSLEAIPL------GSSAFYLKWVKPEQPNGVLMGYKIKYQ-SVK 545 (745)
Q Consensus 474 ~~Y~~~V~a~n~~G~g~~S~~~~~~t~~-~~P~~p~~~~~~~~------~~~~i~l~W~~p~~~~g~i~~Y~v~~~-~~~ 545 (745)
+.|.|+|.|.|..|.+. +..+.+.+.. ..|++|.++.+... +.+++.|+|++|...+..+.+|.|+|+ ..+
T Consensus 79 ~~Y~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~ 157 (215)
T 1cd9_B 79 QYMAIWVQAENMLGSSE-SPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLK 157 (215)
T ss_dssp SCEEEEEEEEETTEEEE-CCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESST
T ss_pred eEEEEEEEEECCCCCcc-CccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCC
Confidence 99999999999999863 4445565444 46888988887765 678899999999765555689999999 555
Q ss_pred CcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCC
Q psy11701 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605 (745)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~ 605 (745)
...|.... ........+.|.+|.|++.|.|+|+|.+..|.|.+|+++..+...++
T Consensus 158 ~~~w~~~~-----~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~ 212 (215)
T 1cd9_B 158 GANWTLVF-----HLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPT 212 (215)
T ss_dssp TCCCEEEE-----EEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCC
T ss_pred CCCcEEEe-----cccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecC
Confidence 44433211 11234578999999999999999999999998887777655555554
No 255
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.81 E-value=1.7e-19 Score=174.06 Aligned_cols=186 Identities=16% Similarity=0.255 Sum_probs=122.8
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCe-----eEEEECCEecCC-----------------CCCeE---eccCCc
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ-----TIWSKDGVPINP-----------------SDRIS---QGNYGK 87 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~-----v~W~~~~~~i~~-----------------~~~~~---~~~~~~ 87 (745)
|...+..|....+.+|++++|.|.+.|.|.+. +.|+|++..... ..++. ......
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDA 82 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBC
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcE
Confidence 34445566777899999999999999888775 999996432210 01111 011234
Q ss_pred EEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEe
Q psy11701 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKP 165 (745)
Q Consensus 88 ~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~ 165 (745)
+|.|.+++.+|+|.|+|.+.+..+... ..+.|.|..+|.+...+.. .+..|+.+.|.|.+.+ .|.+ .++|+++|+.
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~-~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~ 160 (248)
T 3pv7_A 83 SLRLPGIQLEEAGEYRCEVVVTPLKAQ-GTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQK 160 (248)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEE-EEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSS
T ss_pred EEEeCCCCHHHCeEEEEEEEeCCccce-eEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCcc
Confidence 699999999999999999999877654 6789999999988777663 3556888889999998 7888 9999999965
Q ss_pred ccCCC-------------CCCceeecCceEEEccCCCCCCEEEEEEEEeCCce--EEEEEEEEEeecCCeee
Q psy11701 166 ISQAP-------------PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY--VYKDVYVNVLAHAPEIT 222 (745)
Q Consensus 166 ~~~~~-------------~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~--~~~~~~l~v~~~~p~~~ 222 (745)
+.... ...........|.|.....+|+|.|+|.|.|..+. ....+.|.| ..|.+.
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V--~~p~~~ 230 (248)
T 3pv7_A 161 FPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA--ARHSLS 230 (248)
T ss_dssp SCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC----------
T ss_pred CCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE--cCCCCC
Confidence 43210 00011112346888899999999999999998876 444566666 344443
No 256
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.81 E-value=3.3e-20 Score=172.07 Aligned_cols=154 Identities=20% Similarity=0.263 Sum_probs=110.8
Q ss_pred EecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEE-
Q psy11701 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL- 123 (745)
Q Consensus 45 v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~- 123 (745)
+.+|++++|.|.+ |.+.|.|+|||..|... ...+++|.|.+++.+|+|.|+|.+.+... ..+.|.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s----~~~~v~v~~ 82 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNKS----KPLQVYYRM 82 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSCC----CCEEEEEEC
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCCC----eeEEEEEEE
Confidence 5689999999998 77899999999988532 12456899999999999999999754322 12344443
Q ss_pred --------------------------e----cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCC
Q psy11701 124 --------------------------A----APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173 (745)
Q Consensus 124 --------------------------~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~ 173 (745)
. ++.+...|. ....+|++++|.|. +.|.+.+.|+|+|..+.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~ 159 (204)
T 1sy6_A 83 GSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDK 159 (204)
T ss_dssp ------------------------------------CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCT
T ss_pred eccccccccccccccccccccccccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCc
Confidence 0 222222222 22238999999998 77888999999999886543333
Q ss_pred ceeecCceEEEccC-CCCCCEEEEEEEEeCCceE-EEEEEEE
Q psy11701 174 RRKVGPNRITIENL-RKSDTGNYGCNATNSLGYV-YKDVYVN 213 (745)
Q Consensus 174 ~~~~~~~~L~i~~v-~~~d~G~Y~C~~~~~~g~~-~~~~~l~ 213 (745)
.....++.|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.
T Consensus 160 ~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 160 NIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp TEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred eEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 33445789999999 9999999999999998862 3334443
No 257
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.81 E-value=1.1e-18 Score=160.64 Aligned_cols=157 Identities=17% Similarity=0.248 Sum_probs=117.1
Q ss_pred eccceeEecCCcEEEEEEEee-cCCCeeEEEECCEecC---CC---------------CCeEeccCCcEEEEccCCCCCC
Q psy11701 39 TRKKEVALRNKKVELFCIFGG-TPLPQTIWSKDGVPIN---PS---------------DRISQGNYGKSLIIKHVEFSDQ 99 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~g-~p~~~v~W~~~~~~i~---~~---------------~~~~~~~~~~~L~i~~~~~~d~ 99 (745)
.|..+.+.+|++|+|.|.+.+ .+.+.|.|+|++..|. .+ +|+.+. .+.+|+|.+++.+|+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QSYSLQLSNLKMEDT 82 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TTCCEEECSCCGGGC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CCeEEEECCCCcccC
Confidence 456678999999999999975 4556999999986542 11 245554 356899999999999
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEEEecCe---EEecCceeEeeCCC-eEEEEEEEeec-CCCeEEEEeCCEeccCCCCCCc
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPY---FTVEPEFINAAEEE-TVTFECKASGL-PEPEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V~~~p~---~~~~~~~~~v~~G~-~~~l~C~~~~~-p~~~v~W~~~g~~~~~~~~~~~ 174 (745)
|.|+|.+.+..+... ..+.|.|..++. +...+ ..+..|. .++|.|.+.+. |.+.+.|+++|..+..
T Consensus 83 G~Y~C~~~~~~~~~~-~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~------ 153 (193)
T 2if7_A 83 GSYRAQISTKTSAKL-SSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS------ 153 (193)
T ss_dssp EEEEEEEECSSCEEE-EEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES------
T ss_pred ceEEEEEEecCCCeE-EEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC------
Confidence 999999998877654 578888876543 33332 2234565 89999999984 5789999999987642
Q ss_pred eeecCceEEEccCCCC-CCEEEEEEEEeCCceEEEE
Q psy11701 175 RKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 175 ~~~~~~~L~i~~v~~~-d~G~Y~C~~~~~~g~~~~~ 209 (745)
...|.|.....+ |+|.|+|.|.|..|..+..
T Consensus 154 ----~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 154 ----QPNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp ----SSEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred ----CCeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 346777655554 8999999999999887543
No 258
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.81 E-value=2.1e-19 Score=169.75 Aligned_cols=171 Identities=20% Similarity=0.315 Sum_probs=121.8
Q ss_pred eeccceeEecCCcEEEEEEEeec-CCCeeEEEECC--Eec--------------C--CCCCeEec--cCCcEEEEccCCC
Q psy11701 38 VTRKKEVALRNKKVELFCIFGGT-PLPQTIWSKDG--VPI--------------N--PSDRISQG--NYGKSLIIKHVEF 96 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~--~~i--------------~--~~~~~~~~--~~~~~L~i~~~~~ 96 (745)
..| .+.+.+|++++|.|.+.+. |.+.+.|+|.. ... . ...|+.+. ....+|.|.+++.
T Consensus 6 ~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (218)
T 3s96_B 6 QSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQP 84 (218)
T ss_dssp CCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCG
T ss_pred eCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCc
Confidence 344 7889999999999999998 88999999831 110 0 01344432 2335799999999
Q ss_pred CCCEEEEEEEEeCCe----eeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEec
Q psy11701 97 SDQGSYTCEVSNGVG----EAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPI 166 (745)
Q Consensus 97 ~d~G~Y~C~~~~~~g----~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~ 166 (745)
+|+|.|+|.+.+..| ......+.|.|. .+|.+...+....+..|+.++|.|.+.+ .|.+ .+.|+|+|..+
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l 164 (218)
T 3s96_B 85 EDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPI 164 (218)
T ss_dssp GGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred ccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEEC
Confidence 999999999988654 222345678887 5677766655555667899999999988 5666 89999999988
Q ss_pred cCCCCCCce------eecCceEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 167 SQAPPNPRR------KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 167 ~~~~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~ 209 (745)
......... ....+.|.|.....+|+|.|+|.|.|..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 165 TQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp --------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred cCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 642211111 1112358888888889999999999998765543
No 259
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.81 E-value=1.9e-18 Score=157.03 Aligned_cols=155 Identities=15% Similarity=0.166 Sum_probs=117.9
Q ss_pred eeEecCCcEEEEEEEeecCCC--eeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeeeEEEEEEE
Q psy11701 43 EVALRNKKVELFCIFGGTPLP--QTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDL 120 (745)
Q Consensus 43 ~~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l 120 (745)
+.+.+|++++|.|.+ +.|.| .|.|++.+..+ .+......+..|.|.+++.+|.|.|.|.+.+..+.. ...+.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~-~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTF-QHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCce-EEEEEE
Confidence 699999999999999 88888 99999966555 344445666789999999999999999999987664 478999
Q ss_pred EEEecCeEEecCceeEeeCCCeEEEEEEEeec-CC----CeEEEEeCCEeccCCCCCC-ce--------------eecCc
Q psy11701 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGL-PE----PEIHWVHNGKPISQAPPNP-RR--------------KVGPN 180 (745)
Q Consensus 121 ~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~----~~v~W~~~g~~~~~~~~~~-~~--------------~~~~~ 180 (745)
+|+.+|........ .+.+|+.+ |+|.+.+. |. ++++|+|||+.|....... .. ..-.+
T Consensus 92 tV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts 169 (210)
T 1gsm_A 92 LVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTE 169 (210)
T ss_dssp EEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEE
T ss_pred EEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEE
Confidence 99999976443222 67788889 99999884 64 4899999999996432111 11 01123
Q ss_pred eEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 181 RITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 181 ~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
+|.+.....+|.+.|+|+|.+...
T Consensus 170 ~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 170 RWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp EEECCCCCSSCCSEEEEEEEEEET
T ss_pred EEeecCCcccCCceEEEEEEeeCC
Confidence 455557777778999999997653
No 260
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.81 E-value=2.7e-19 Score=168.24 Aligned_cols=169 Identities=15% Similarity=0.182 Sum_probs=125.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Eec------------CCCCCeEec--cCCcEEEEccCCCCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPI------------NPSDRISQG--NYGKSLIIKHVEFSDQ 99 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i------------~~~~~~~~~--~~~~~L~i~~~~~~d~ 99 (745)
+...|..+.+.+|++++|.|.+.+.|.+.+.|+|++ ... ....++... ....+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3r06_A 4 MTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDI 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccC
Confidence 345578889999999999999999888999999832 111 113455433 2334899999999999
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEE---EecCeEEecCceeEeeCCCeEEEEEEEeecCC--CeEEEEeCCEeccCCC-CC-
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSV---LAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAP-PN- 172 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V---~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~--~~v~W~~~g~~~~~~~-~~- 172 (745)
|.|+|.+.+..+........|.| ..+|.+...+....+..|+.++|.|.+.+.++ +.+.|+|+|..+.... ..
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 163 (213)
T 3r06_A 84 GSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSV 163 (213)
T ss_dssp SEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEE
T ss_pred EEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEecc
Confidence 99999998865544444566777 56788877777666778999999999988544 4899999999886421 00
Q ss_pred C------ceeecCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 173 P------RRKVGPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 173 ~------~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
. ........|.|.....+|+|.|+|.|.|...
T Consensus 164 ~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 164 TDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 0 0111123688888888999999999999764
No 261
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=4.3e-19 Score=162.48 Aligned_cols=160 Identities=21% Similarity=0.320 Sum_probs=124.6
Q ss_pred eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccC-----------CCCCCceee-------cCceEEEccCCCCCCEEE
Q psy11701 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ-----------APPNPRRKV-------GPNRITIENLRKSDTGNY 195 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~-----------~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y 195 (745)
...+.+|++++|.|.+.+.|.+.+.|+|++..+.. .....+... +...|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45688999999999999888899999999863211 011112211 244699999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEc
Q psy11701 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKIT 275 (745)
Q Consensus 196 ~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~ 275 (745)
+|.+.+..+ .+.|.|.. +.. +....+.+|++++|.|.+.+.|.+.+.|++++..+ ....+.|.|.
T Consensus 84 ~C~~~~~~~----~~~l~V~~----~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~ 148 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG----LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVS 148 (184)
T ss_dssp EEEETTEEE----EEEEEEEE----EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE------EEESSEEEES
T ss_pred EEEEEcCCC----cEEEEEEE----ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------ccCceEEEEe
Confidence 999987654 34455542 222 34457889999999999999999999999987554 2356789999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 276 ~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
++..+|+|.|+|.|.|..+.....+.|.|...|
T Consensus 149 ~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 149 QLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred cCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 999999999999999999999899999988755
No 262
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.81 E-value=5.6e-19 Score=159.38 Aligned_cols=163 Identities=23% Similarity=0.389 Sum_probs=126.0
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecC-CCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLP-EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.|.+...|....+.+|+++.|.|.+.+.| .+.+.|+|+|..+... ...+.|.+++.+|+|.|+|.+.+..
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~---------~~~~~~~~~~~~d~G~Y~C~~~~~~ 74 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH---------TQPSYRFKANNNDSGEYTCQTGQTS 74 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC---------CSSEEEEECCGGGCEEEEEEETTSB
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC---------ccceEEEecccccCeEEEEEEeCCC
Confidence 45667778877899999999999998876 5699999999988742 3457788999999999999998754
Q ss_pred ceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEee-cCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCCC
Q psy11701 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG-APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282 (745)
Q Consensus 204 g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 282 (745)
.. ..+.|.|.. ++.+... ....+.+|+.++|.|.+.+ .|.+.+.|++++..+.. ....+.|.|.++..+|+
T Consensus 75 ~s--~~~~l~v~~-~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~----~~~~~~L~i~~v~~~d~ 146 (170)
T 3ry4_A 75 LS--DPVHLTVLF-EWLVLQT-PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF----SHLDPTFSIPQANHSHS 146 (170)
T ss_dssp CC--CCEEEEEEC-CSEEEEC-SCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE----ESSCCEEEESSCCGGGC
T ss_pred ce--EeEEEEEEC-CceEecC-CCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc----cCCCCeEEEEeccccCC
Confidence 33 346666764 4444433 3556789999999999954 45679999999987642 12356799999999999
Q ss_pred EEEEEEEEeCCce-EEEEEEEEE
Q psy11701 283 GEYTCFARNKLGT-AQGSGSLTV 304 (745)
Q Consensus 283 G~Y~C~~~n~~g~-~~~~~~l~v 304 (745)
|.|+|.|.|..|. .+..+.|.|
T Consensus 147 G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 147 GDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEEEeCcCccccccEEEEE
Confidence 9999999999886 344455554
No 263
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.81 E-value=1.7e-19 Score=174.87 Aligned_cols=173 Identities=15% Similarity=0.189 Sum_probs=124.5
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecC-----CCeeEEEEC--CEec------------CCCCCeEecc--CCcEEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTP-----LPQTIWSKD--GVPI------------NPSDRISQGN--YGKSLII 91 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~~~v~W~~~--~~~i------------~~~~~~~~~~--~~~~L~i 91 (745)
+..+...|....+.+|++++|.|.+.+.| .+.+.|+|+ +..+ ....++.... ...+|.|
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 117 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKI 117 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEE
Confidence 44556678899999999999999998887 479999984 3322 1124555433 2348999
Q ss_pred ccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEee-cCC-CeEEEEeCCEec
Q psy11701 92 KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASG-LPE-PEIHWVHNGKPI 166 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~-~~v~W~~~g~~~ 166 (745)
.+++.+|+|.|+|.|.+..+........|.|.. +|.+...+......+|+.++|.|.+.| .|. +.++|+|+|..+
T Consensus 118 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 197 (254)
T 2c1o_A 118 SRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 197 (254)
T ss_dssp SSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEE
T ss_pred CcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcc
Confidence 999999999999999887554333334566653 677766554444457889999999988 444 469999999987
Q ss_pred cCC-CC-------CCceeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 167 SQA-PP-------NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 167 ~~~-~~-------~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
... .. ........+.|.|.++..+|+|.|+|.|.|....
T Consensus 198 ~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 198 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 643 00 0001112357999999999999999999998654
No 264
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.80 E-value=5.3e-19 Score=165.63 Aligned_cols=176 Identities=19% Similarity=0.251 Sum_probs=130.3
Q ss_pred ecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccC----------------CCCCCcee-ecCceEEEccCCCCCC
Q psy11701 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ----------------APPNPRRK-VGPNRITIENLRKSDT 192 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~----------------~~~~~~~~-~~~~~L~i~~v~~~d~ 192 (745)
+.+....+.+|+++.|.|...+.+.+.+.|++++..... .....+.. ..++.|.|.+++.+|+
T Consensus 4 i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~ 83 (208)
T 3r4d_A 4 IEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDM 83 (208)
T ss_dssp EEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGC
T ss_pred ccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCC
Confidence 344456789999999999988888889999997542211 11112222 2356899999999999
Q ss_pred EEEEEEEEeCC-ceEEEEEEEEEeecC--CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccC-ceEEEee
Q psy11701 193 GNYGCNATNSL-GYVYKDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTILE 268 (745)
Q Consensus 193 G~Y~C~~~~~~-g~~~~~~~l~v~~~~--p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~ 268 (745)
|.|+|.+.+.. +.....+.|.|...+ |.+...+.. +.+|+.++|.|.+.+.| +.+.|++++..+.. .++....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~ 160 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQ 160 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEET
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcC
Confidence 99999999985 555666777776432 455544444 88899999999998866 79999999988753 3444433
Q ss_pred -cCcEEEcccCCCCCEEEEEEEEeCCceEE-EEEEEEEeecc
Q psy11701 269 -TGDLKITDVAFADSGEYTCFARNKLGTAQ-GSGSLTVKEHT 308 (745)
Q Consensus 269 -~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~~p 308 (745)
.+.|.|.++..+|.|.|+|.|.|..|... ..+.|.|..++
T Consensus 161 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 161 NNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred CCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 36899999999999999999999998854 45677766654
No 265
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.80 E-value=2.3e-19 Score=169.46 Aligned_cols=175 Identities=18% Similarity=0.209 Sum_probs=121.8
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEecC-----------------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPIN-----------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i~-----------------~~~~~~~~~----~~~~L~ 90 (745)
.+.+|....+.+|++++|.|.+.|.+ .+.+.|+|+ +..+. ...|+.+.. ...+|.
T Consensus 3 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (219)
T 1c1e_H 3 QLVQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQ 82 (219)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEE
T ss_pred cEeCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEE
Confidence 34567778899999999999998865 679999996 33221 124555432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCee---eEEEEEEEEEEec----CeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEe
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGE---AKSYSIDLSVLAA----PYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVH 161 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~---~~~~~~~l~V~~~----p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~ 161 (745)
|.+++.+|+|.|+|.+.+..+. .....+.|.|... |.+...+....+.+|+.+.|.|.+.| .|.+ .++|++
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 162 (219)
T 1c1e_H 83 INNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (219)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEe
Confidence 9999999999999999987531 2223456777653 66655444445678999999999998 8988 999999
Q ss_pred CCEeccCCCCCCce----eecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy11701 162 NGKPISQAPPNPRR----KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211 (745)
Q Consensus 162 ~g~~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~ 211 (745)
+|..+......... ....+.|.|... ..|+|.|+|.|.|..+.......
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 163 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp GTBCTTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEE
T ss_pred CCcccceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEe
Confidence 99865311111101 011246888444 44669999999998876554443
No 266
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.80 E-value=6.5e-19 Score=165.86 Aligned_cols=162 Identities=20% Similarity=0.274 Sum_probs=117.5
Q ss_pred EeeccceeEecCCcEEEEEEEeec-------CCCeeEEEECCEe------c-----------CCCCCeEecc----CCcE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGT-------PLPQTIWSKDGVP------I-----------NPSDRISQGN----YGKS 88 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~-------p~~~v~W~~~~~~------i-----------~~~~~~~~~~----~~~~ 88 (745)
+..|..+.+.+|++++|.|.+.+. +.+.+.|+|++.. + ....|+.+.. ...+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 445778899999999999999754 4668999998652 1 1124555532 2347
Q ss_pred EEEccCCCCCCEEEEEEEEeCCeeeEE---EEEEEEEEec---CeEEecCceeEeeCCCeEEEEEEEeec----CCCeEE
Q psy11701 89 LIIKHVEFSDQGSYTCEVSNGVGEAKS---YSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKASGL----PEPEIH 158 (745)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~g~~~~---~~~~l~V~~~---p~~~~~~~~~~v~~G~~~~l~C~~~~~----p~~~v~ 158 (745)
|.|.+++.+|+|.|.|.+.+..+...+ ..+.|.|..+ |.+.. +. .+.+|+.++|.|.+.+. |.+.++
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEE
Confidence 999999999999999999987533222 3577888763 44433 22 36799999999999763 788999
Q ss_pred EEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceE
Q psy11701 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206 (745)
Q Consensus 159 W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~ 206 (745)
|++++..+... .....+.|.|..+..+|+|.|+|.|.|..+..
T Consensus 161 W~~~~~~~~~~-----~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~ 203 (214)
T 2zg1_A 161 WTGNALSPLDP-----ETTRSSELTLTPRPEDHGTNLTCQMKRQGAQV 203 (214)
T ss_dssp EESSTTSSSCS-----SCCCSSEEEECCCTTCCSCEEEEEEECC----
T ss_pred EeCCCCccCCC-----CceeEEEEEEecccHHcCcEEEEEEEeCCCCc
Confidence 99998654311 12456789999999999999999999976543
No 267
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.80 E-value=1.5e-19 Score=169.74 Aligned_cols=167 Identities=19% Similarity=0.278 Sum_probs=125.0
Q ss_pred ceeEecCCcEEEEEEEeecCCCeeEEEEC--CEecC------------CCCCeEec--cCCcEEEEccCCCCCCEEEEEE
Q psy11701 42 KEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPIN------------PSDRISQG--NYGKSLIIKHVEFSDQGSYTCE 105 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i~------------~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~ 105 (745)
...+.+|++++|.|.+. |.+.+.|+|+ +..+. ...++... ....+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 77899999999999998 7889999994 32221 22455432 2345799999999999999999
Q ss_pred EEeCCe-eeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec--CCCeEEEEeCCEeccCCCCCCce-e-
Q psy11701 106 VSNGVG-EAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL--PEPEIHWVHNGKPISQAPPNPRR-K- 176 (745)
Q Consensus 106 ~~~~~g-~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~g~~~~~~~~~~~~-~- 176 (745)
+.+..+ ......+.|.|. .+|.+...+....+.+|+.++|.|.+.+. |.+.+.|+|+|..+......... .
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 166 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ 166 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceEC
Confidence 999876 344455778887 67888777766556689999999999885 35799999999988642111111 1
Q ss_pred -----ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 177 -----VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210 (745)
Q Consensus 177 -----~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~ 210 (745)
...+.|.|.++..+|+|.|+|.|.|..+.....+
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 167 SNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp TTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 1124689999999999999999999987655543
No 268
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=1.8e-19 Score=174.56 Aligned_cols=168 Identities=20% Similarity=0.269 Sum_probs=121.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEecC----------------CCCCeEecc----CCcEEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPIN----------------PSDRISQGN----YGKSLII 91 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i~----------------~~~~~~~~~----~~~~L~i 91 (745)
++.+|....+.+|++|+|.|.+.|.| .+.+.|+|+ +..+. ...|+.+.. ...+|+|
T Consensus 3 ~~~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (257)
T 1f3r_B 3 QLLESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKM 82 (257)
T ss_dssp EEEEECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEE
T ss_pred eEECCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEE
Confidence 34566677899999999999999875 679999985 22110 134555432 2348999
Q ss_pred ccCCCCCCEEEEEEEEeCCe--------eeEEEEEEEEEEecC---------------eEEecCceeEeeCCCeEEEEEE
Q psy11701 92 KHVEFSDQGSYTCEVSNGVG--------EAKSYSIDLSVLAAP---------------YFTVEPEFINAAEEETVTFECK 148 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~g--------~~~~~~~~l~V~~~p---------------~~~~~~~~~~v~~G~~~~l~C~ 148 (745)
.+++.+|+|.|+|.+.+..| ......+.|.|..+| .+...|....+.+|++++|.|.
T Consensus 83 ~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 162 (257)
T 1f3r_B 83 NSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCK 162 (257)
T ss_dssp ESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEE
T ss_pred CCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEE
Confidence 99999999999999998743 112234577787643 2344566778899999999999
Q ss_pred EeecCCCeEEEEe--CCEeccC---------CCCCCcee----ecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 149 ASGLPEPEIHWVH--NGKPISQ---------APPNPRRK----VGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 149 ~~~~p~~~v~W~~--~g~~~~~---------~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
+.+.+.+.+.|+| +|..+.. .....++. .....|.|.++..+|+|.|+|.|.|..
T Consensus 163 ~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 163 GSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred ECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 9988888999999 5554310 00112222 123579999999999999999999865
No 269
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.80 E-value=2.8e-18 Score=161.23 Aligned_cols=196 Identities=11% Similarity=0.068 Sum_probs=128.8
Q ss_pred CCCCCCCceeEEEc-CCceEEEEeeCCCCCCCceeeEEEEEEEcCCccc-CCc-ccccccccCCCcceeeecCCCCCccE
Q psy11701 502 GVPGTVQSLEAIPL-GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV-GPL-LERLPYISDPTTTSAKLAGLEPSTKY 578 (745)
Q Consensus 502 ~~P~~p~~~~~~~~-~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y 578 (745)
.+|++|.++.+... ..++++++|+++.+.++ ..+|.|+|+.....-. ... ..............+.+.+|.+++.|
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y 81 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYM 81 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCE
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCCCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEE
Confidence 46889999998877 68899999999887554 4679999987543210 000 00000001234567888899999999
Q ss_pred EEEEEEEecCCCCCCcceeeeccc----CCCCCCCCCCC------CCcceeEEEeecCccccCCCcceEEEEEe-ccCCC
Q psy11701 579 RIHLAGYTKAGDGAESKYLFYVPF----KNPDNVEGRGS------TPNNLVISWTAMPEIEHNAPHFKYRIFWR-RHNTG 647 (745)
Q Consensus 579 ~~~V~a~n~~G~g~~S~~~~~~~~----~~~~~~~~~~~------~p~~~~v~W~~~~~~~~~g~i~~y~i~~~-~~~~~ 647 (745)
.|+|.|.|..|.+.+......... .+|..+.+... .+++|.|+|++|.. .+..+..|.|+|+ ..+ .
T Consensus 82 ~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~--~~~~~l~Y~v~y~~~~~-~ 158 (215)
T 1cd9_B 82 AIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP--SEYMEQECELRYQPQLK-G 158 (215)
T ss_dssp EEEEEEEETTEEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG--GTTSCEEEEEEEEESST-T
T ss_pred EEEEEEECCCCCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC--CCeEEEEEEEEEccCCC-C
Confidence 999999999998754332222111 12222223332 57889999997764 2233479999998 432 2
Q ss_pred CCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCccc
Q psy11701 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 727 (745)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~ 727 (745)
..|.. +....+..+.+.|.+|.|++.|.|+|+|.+.+|.
T Consensus 159 ~~w~~-----------------------------------------~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~ 197 (215)
T 1cd9_B 159 ANWTL-----------------------------------------VFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLP 197 (215)
T ss_dssp CCCEE-----------------------------------------EEEEESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred CCcEE-----------------------------------------EecccCcceEEEEcCCCCCCEEEEEEEeeECCCC
Confidence 21110 0011234567889999999999999999998776
Q ss_pred C---CCCcceEEeCCCCC
Q psy11701 728 G---PPSEIISFVTPEGG 742 (745)
Q Consensus 728 g---~~s~~~~~~t~~~~ 742 (745)
| +||+++.++|++.+
T Consensus 198 G~wS~wS~~~~~~T~e~a 215 (215)
T 1cd9_B 198 GFWSPWSPGLQLRPTMKA 215 (215)
T ss_dssp CCCCCCCCCEEECCCC--
T ss_pred CCCcCCCCccceecCCCC
Confidence 4 68899999998753
No 270
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=1.5e-18 Score=167.39 Aligned_cols=169 Identities=18% Similarity=0.235 Sum_probs=122.1
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Eec-----------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPI-----------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i-----------------~~~~~~~~~~----~~~~L~ 90 (745)
.+..|....+.+|++++|.|.+.|.| .+.|.|+|++ ..+ ....|+.+.. ...+|+
T Consensus 5 ~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 84 (247)
T 2ghw_B 5 QLVQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQ 84 (247)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred EEEecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEE
Confidence 34556678999999999999999887 5789999842 111 1134555432 234799
Q ss_pred EccCCCCCCEEEEEEEEeCCeee-EEEEEEEEEEec---------------CeEEecCceeEeeCCCeEEEEEEEeecCC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEA-KSYSIDLSVLAA---------------PYFTVEPEFINAAEEETVTFECKASGLPE 154 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~-~~~~~~l~V~~~---------------p~~~~~~~~~~v~~G~~~~l~C~~~~~p~ 154 (745)
|.+++.+|+|.|+|.+.+..+.. ....+.|.|..+ +.+...+....+.+|++++|.|.+.+.|.
T Consensus 85 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 164 (247)
T 2ghw_B 85 MNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVR 164 (247)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCT
T ss_pred ECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCcc
Confidence 99999999999999999873322 223356777643 34566677788999999999999999888
Q ss_pred CeEEEEe--CCEeccC---------CCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 155 PEIHWVH--NGKPISQ---------APPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 155 ~~v~W~~--~g~~~~~---------~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
+.+.|+| +|..+.. .....++.. ....|.|.+++.+|+|.|+|.|.+...
T Consensus 165 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 229 (247)
T 2ghw_B 165 SNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWP 229 (247)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSS
T ss_pred ceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCC
Confidence 8999999 5554310 011122222 234799999999999999999987543
No 271
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.80 E-value=4.7e-19 Score=166.97 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=117.4
Q ss_pred eccceeEecCCcEEEEEEE-eecC-CCeeEEEECC--Eec------------CCCCCeEec--cCCcEEEEccCCCCCCE
Q psy11701 39 TRKKEVALRNKKVELFCIF-GGTP-LPQTIWSKDG--VPI------------NPSDRISQG--NYGKSLIIKHVEFSDQG 100 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~-~g~p-~~~v~W~~~~--~~i------------~~~~~~~~~--~~~~~L~i~~~~~~d~G 100 (745)
.|....+.+|++++|.|.+ .+.+ .+.+.|+|++ ..+ ....|+... ....+|.|.+++.+|+|
T Consensus 6 qp~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 6 QPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 3677889999999999995 4443 5799999943 221 112455543 23348999999999999
Q ss_pred EEEEEEEeCCe-eeEEEEEEEEEE---ecCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEeccCC-CCC-
Q psy11701 101 SYTCEVSNGVG-EAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPISQA-PPN- 172 (745)
Q Consensus 101 ~Y~C~~~~~~g-~~~~~~~~l~V~---~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~~~~-~~~- 172 (745)
.|+|.+.+..+ ........|.|. .+|.+...+......+|+.++|.|.+.| .|.+ .++|+|+|..+... ...
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 165 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESV 165 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEE
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEec
Confidence 99999998765 222233556665 4666666444333446999999999988 5554 89999999988643 000
Q ss_pred Cce------eecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 173 PRR------KVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 173 ~~~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
... ....+.|.|..+..+|+|.|+|.|.|....
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 166 TEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 000 011237899999999999999999998644
No 272
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.80 E-value=2e-18 Score=177.47 Aligned_cols=270 Identities=16% Similarity=0.125 Sum_probs=185.5
Q ss_pred ecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCC--CCEEEEEEEEeCCc
Q psy11701 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL--DSGQYTCRAQTELD 388 (745)
Q Consensus 311 ~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--~~g~y~c~a~n~~g 388 (745)
...|....+..|.++++.|..... ......++.... ..........+++.++... ....|.|...
T Consensus 202 ~ifP~~~vv~~GS~vt~~Ci~~~~-----~~~~~l~~~~~~----~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~---- 268 (483)
T 3e0g_A 202 KVFPQDKVILVGSDITFCCVSQEK-----VLSALIGHTNCP----LIHLDGENVAIKIRNISVSASSGTNVVFTTE---- 268 (483)
T ss_dssp CEESCSEEEETTCCEEEEECCSSC-----EEEEESSSCCBC----CEECSSSCEEEEECSCCCCCSSCEEEEEEES----
T ss_pred EEeccCCEEeCCCCEEEEEEeCcc-----ccceecCcccce----eEEecCCEEEEEEeCCCCccCccceEEEecC----
Confidence 345666778899999999987621 222222222111 0111223446677776542 3357999852
Q ss_pred eEEEEEEEEEeccCCCCCCceeEEeecCceeEEEEEeCCCCCccee-eeeEEEEEEeccCCCCceeEEEE---ccCceeE
Q psy11701 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH-FRGYKVQTWTEKDGEGSIRELIV---NKGESTT 464 (745)
Q Consensus 389 ~~~~~~~l~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~-i~~y~i~~~~~~~~~~~~~~~~~---~~~~~~~ 464 (745)
.......+.+..||.+|+++.+.. ....++.++|+++.....+|+ .+.|.|.|+..+. ...... .......
T Consensus 269 ~~~~g~~l~vg~PP~~P~nlsC~s-~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~----~~~C~~~~~~~~~~~~ 343 (483)
T 3e0g_A 269 DNIFGTVIFAGYPPDTPQQLNCET-HDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK----YVRLKRAEAPTNESYQ 343 (483)
T ss_dssp SCEEEEEEEEECCCCCCEEEEEEB-SSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC----EEEECCCSSCSCSCEE
T ss_pred CcccceEEECcCCCCCCCccEEEe-cCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC----CccccCCcccCCCEEE
Confidence 234556788999999999999876 677899999999765554454 7899998875321 111111 0123567
Q ss_pred EEecccccCcceeEEEEEecCCCCCCCCcceEEe-CCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEE
Q psy11701 465 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543 (745)
Q Consensus 465 ~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~-t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~ 543 (745)
+.+.+|.+.+.|.|+|.|.|..|.+.. . ..+. +....|.||.++++.....+.+.|+|++|...++.+..|.|+|+.
T Consensus 344 C~~~~l~~~t~Y~f~V~A~N~lG~~~S-~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~ 421 (483)
T 3e0g_A 344 LLFQMLPNQEIYNFTLNAHNPLGRSQS-T-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKK 421 (483)
T ss_dssp EEEECCTTCCCEEEEEEEECSSCEEEE-E-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEEC
T ss_pred EEEccCCCCcEEEEEEEEEeCCCCccc-c-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEE
Confidence 889999999999999999999998763 3 3443 334678999999998778899999999997667788999999998
Q ss_pred cCCcccCCcccccccccC--CCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCC
Q psy11701 544 VKGTKVGPLLERLPYISD--PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605 (745)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~ 605 (745)
.+.... +.... +.. .....+.+.+|.|++.|.|+|+|. ..|.|.+|+++......++
T Consensus 422 ~~~~~~--~~~vs--v~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~ 480 (483)
T 3e0g_A 422 SNSVQE--QRNVT--IQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTT 480 (483)
T ss_dssp SSSCCC--EEECC--CBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCC
T ss_pred CCCCCc--eEEEE--EeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECC
Confidence 765321 11111 111 233468899999999999999999 7788777776655555554
No 273
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.80 E-value=4.8e-20 Score=173.25 Aligned_cols=167 Identities=18% Similarity=0.273 Sum_probs=121.4
Q ss_pred eccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEecC------------CCCCeEecc--CCcEEEEccCCCCCCEEE
Q psy11701 39 TRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPIN------------PSDRISQGN--YGKSLIIKHVEFSDQGSY 102 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i~------------~~~~~~~~~--~~~~L~i~~~~~~d~G~Y 102 (745)
+|....+.+|++++|.|.+.+.|.+.+.|+|+ +..+. ...++.... ...+|.|.+++.+|+|.|
T Consensus 5 qp~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 84 (212)
T 1nfd_E 5 QPSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAY 84 (212)
T ss_dssp CCSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEE
T ss_pred CCCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEE
Confidence 37778899999999999998888789999984 33221 124554432 334899999999999999
Q ss_pred EEEEEeC-C-eeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEeccCCCCCCc
Q psy11701 103 TCEVSNG-V-GEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 103 ~C~~~~~-~-g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~~~~~~~~ 174 (745)
+|.+.+. . .........|.|. .+|.+...+....+.+|+.++|.|.+.|. |. +.++|+|+|..+........
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTK 164 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCC
T ss_pred EEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCC
Confidence 9999963 2 2222233456663 46777665555556789999999999886 55 79999999998875422111
Q ss_pred e------eecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 175 R------KVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 175 ~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
. ....+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 1 111246889999999999999999998764
No 274
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.80 E-value=6e-20 Score=208.82 Aligned_cols=232 Identities=14% Similarity=0.188 Sum_probs=174.5
Q ss_pred CeEEEEecCCCCCCEEEEEEE-EeCCce----EEEEEEEEEec---cCCCCCCceeEEeecCceeEEEEEeCCCCCccee
Q psy11701 363 DYSLTVTKSSELDSGQYTCRA-QTELDF----IEAQATLTVQV---PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434 (745)
Q Consensus 363 ~~~l~i~~~~~~~~g~y~c~a-~n~~g~----~~~~~~l~v~~---pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~ 434 (745)
...+.+.++.+...|.|++.| .|..|. +..+..+.++. +|.+|.++.+.. .+.+++.|+|+++ ...+|.
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~-~s~tsI~LsW~pP--~~~nG~ 624 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVS-NSSSQIILKWKPP--SDPNGN 624 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEE-CSSSCEEEEEECC--CCSSSS
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEe-CCCCEEEEEEeCC--CCCCCC
Confidence 356889999999999999999 888775 33333344443 567888888877 7889999999985 456788
Q ss_pred eeeEEEEEEeccCCCC---------------------------------------------------------------c
Q psy11701 435 FRGYKVQTWTEKDGEG---------------------------------------------------------------S 451 (745)
Q Consensus 435 i~~y~i~~~~~~~~~~---------------------------------------------------------------~ 451 (745)
+.+|.|.|+....... .
T Consensus 625 I~~Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~ 704 (897)
T 2dtg_E 625 ITHYLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKT 704 (897)
T ss_dssp CSEEECCEEEECCCCSCTTCSSSCSCCCCCC-------------------------------------------------
T ss_pred eeEEEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeee
Confidence 9999998776432100 0
Q ss_pred eeE-----EE--------------------------EccCceeEEEecccccCcceeEEEEEecCCCCCCC---CcceEE
Q psy11701 452 IRE-----LI--------------------------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP---SEIISF 497 (745)
Q Consensus 452 ~~~-----~~--------------------------~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~---S~~~~~ 497 (745)
|.. +. ........++|.+|.|++.|.|+|.|.|..|.+++ +..+.+
T Consensus 705 W~~~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~ 784 (897)
T 2dtg_E 705 FEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSA 784 (897)
T ss_dssp -------------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEE
T ss_pred EEEccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEE
Confidence 000 00 00123468999999999999999999999998764 556778
Q ss_pred eCCC--CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCC
Q psy11701 498 VTPE--GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575 (745)
Q Consensus 498 ~t~~--~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 575 (745)
+|.+ .+|++|.++++...+.++|.|+|++|.+++|.|.+|.|+|+..+.......... ........++|.+|.|+
T Consensus 785 ~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~~---~~~~~~~~~~l~~L~pg 861 (897)
T 2dtg_E 785 RTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTR---KHFALERGCRLRGLSPG 861 (897)
T ss_dssp ECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCS---SSCCCTTCCCCCSCCSS
T ss_pred eccCccCCCCCCcceEEEeCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEEEee---eeecccCcEEECCCCCC
Confidence 8876 567889999988889999999999999889999999999987664221111110 01345678999999999
Q ss_pred ccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 576 TKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 576 t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
.|.|+|.|.|.+|.|++|+.+.+.+
T Consensus 862 -tY~~rV~A~n~~G~G~~S~~v~~~T 886 (897)
T 2dtg_E 862 -NYSVRIRATSLAGNGSWTEPTYFYV 886 (897)
T ss_dssp -EECCCCCEEETTBCCCCCCCCEECC
T ss_pred -cEEEEEEEEeCCcccCCCCCEEEEe
Confidence 5999999999999999998765543
No 275
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.79 E-value=7.9e-19 Score=168.26 Aligned_cols=172 Identities=16% Similarity=0.198 Sum_probs=125.0
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Ee------------cCCCCCeEec--cCCcEEEEccCCCC
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VP------------INPSDRISQG--NYGKSLIIKHVEFS 97 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~------------i~~~~~~~~~--~~~~~L~i~~~~~~ 97 (745)
..+...|....+.+|++++|.|.+.+.|.+.+.|+|++ .. .....++... ....+|.|.+++.+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 34556688899999999999999998888899999832 11 1113455433 23457999999999
Q ss_pred CCEEEEEEEEeCCeeeEEEEEEEEE---EecCeEEecCceeEeeCCCeEEEEEEEee-cC-CCeEEEEeCCEeccCCC--
Q psy11701 98 DQGSYTCEVSNGVGEAKSYSIDLSV---LAAPYFTVEPEFINAAEEETVTFECKASG-LP-EPEIHWVHNGKPISQAP-- 170 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~~~~~~~~l~V---~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p-~~~v~W~~~g~~~~~~~-- 170 (745)
|+|.|+|.+.+..+........|.| ..+|.+...+....+.+|+.++|.|.+.+ .| .+.++|+|+|..+....
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~ 184 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE 184 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceee
Confidence 9999999998765433334455666 44666766655555667999999999988 45 57999999999887421
Q ss_pred ------CCCceeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 171 ------PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 171 ------~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
.........+.|.|..+..+|+|.|+|.|.|....
T Consensus 185 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 185 SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred cccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 00011112346889999999999999999998653
No 276
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.79 E-value=5e-19 Score=164.66 Aligned_cols=164 Identities=18% Similarity=0.265 Sum_probs=118.2
Q ss_pred ceeEecCCcEEEEEEEe----ecCCCeeEEEECCEecCC------------CCCeEec-cCCcEEEEccCCCCCCEEEEE
Q psy11701 42 KEVALRNKKVELFCIFG----GTPLPQTIWSKDGVPINP------------SDRISQG-NYGKSLIIKHVEFSDQGSYTC 104 (745)
Q Consensus 42 ~~~v~~G~~~~l~C~~~----g~p~~~v~W~~~~~~i~~------------~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C 104 (745)
.+.+.+|++++|.|.+. +.|.+.+.|++++..+.. ..|..++ ..+.+|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 46789999999999995 446779999999987621 2344432 234689999999999999999
Q ss_pred EEEeCCeeeE----EEEEEEEEEec---CeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccCCCCCCcee
Q psy11701 105 EVSNGVGEAK----SYSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRK 176 (745)
Q Consensus 105 ~~~~~~g~~~----~~~~~l~V~~~---p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~~~~~~~~~ 176 (745)
.+.+..|... ...+.|.|..+ |.+... ....|+.+.|.|.+. |.|.+.++|+++|..+.... ....
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~--~~~~ 156 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAIN--TTVS 156 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSE--EEEE
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECcccc--ceEE
Confidence 9999765432 35677888765 333221 124689999999995 89999999999999887431 1122
Q ss_pred e-cC-ceE---EEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy11701 177 V-GP-NRI---TIENLRKSDTGNYGCNATNSLGYVYKDVY 211 (745)
Q Consensus 177 ~-~~-~~L---~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~ 211 (745)
. .. +.+ .+..+..+|.|.|+|.|.|..|.....+.
T Consensus 157 ~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 157 QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 2 12 222 23455678999999999999987766544
No 277
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.79 E-value=1.2e-18 Score=157.21 Aligned_cols=154 Identities=20% Similarity=0.250 Sum_probs=117.6
Q ss_pred ccceeEecCCcEEEEEEEe--ecCCCeeEEEE--CCEec----------CCCCCeEeccCCcEEEEccCCCCCCEEEEEE
Q psy11701 40 RKKEVALRNKKVELFCIFG--GTPLPQTIWSK--DGVPI----------NPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105 (745)
Q Consensus 40 ~~~~~v~~G~~~~l~C~~~--g~p~~~v~W~~--~~~~i----------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 105 (745)
+..+...+|++|+|.|... +.+.+.|.|+| ++..| ...+|+.+..++ +|.|.+++.+|+|.|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng-sL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG-TLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS-CEEECSCCGGGCEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC-CEEECCCChhhCEEEEEE
Confidence 4567889999999999542 34566999999 88877 345677776544 899999999999999999
Q ss_pred EEeCCeeeE-EEEEEEEEEec---CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCce
Q psy11701 106 VSNGVGEAK-SYSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181 (745)
Q Consensus 106 ~~~~~g~~~-~~~~~l~V~~~---p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 181 (745)
+.+..|... ...+.|.|..+ |.+.. .+..++|.|.+.+.|.+.+.|+++|..+. . ....
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l~-~--------~~~~ 147 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHLK-L--------SQRV 147 (182)
T ss_dssp EEETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEEE-E--------ESSC
T ss_pred EEeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEECC-C--------CCcE
Confidence 999877654 35677888753 33322 34479999999988889999999998872 1 1234
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l 212 (745)
|.+.. ..+|+|.|+|.|.|..+.......+
T Consensus 148 i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 148 ITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp EEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 44433 5789999999999999987776655
No 278
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.79 E-value=2e-18 Score=165.51 Aligned_cols=167 Identities=19% Similarity=0.243 Sum_probs=119.5
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEec---------------CCCCCeEecc---CCcEEEEccCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPI---------------NPSDRISQGN---YGKSLIIKHVE 95 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i---------------~~~~~~~~~~---~~~~L~i~~~~ 95 (745)
+...|..+.+.+|++++|.|. .+.|.+.+.|+|+ +..+ ....++.+.. ...+|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 345678889999999999999 7788899999995 2111 1134555432 34589999999
Q ss_pred CCCCEEEEEEEEeCCee----eEEEEEEEEEEecC------------eEEecCceeEeeCCCeEEEEEEEeecCCCeEEE
Q psy11701 96 FSDQGSYTCEVSNGVGE----AKSYSIDLSVLAAP------------YFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~----~~~~~~~l~V~~~p------------~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W 159 (745)
.+|+|.|+|.+.+..|. .......|.|...+ .+...|....+.+|++++|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 99999999999986542 11133567776543 566678888899999999999999988899999
Q ss_pred EeCCE-----eccC---C---CCCCceee------cCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 160 VHNGK-----PISQ---A---PPNPRRKV------GPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 160 ~~~g~-----~~~~---~---~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
+|++. .+.. . ....++.. ....|.|.+++.+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99641 1100 0 00112222 13589999999999999999999974
No 279
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=171.60 Aligned_cols=173 Identities=26% Similarity=0.369 Sum_probs=124.0
Q ss_pred cceeEecCCcEEEEEEEeecCC-----CeeEEEECCEec-------------CCCCCeEecc-----CCcEEEEccCCCC
Q psy11701 41 KKEVALRNKKVELFCIFGGTPL-----PQTIWSKDGVPI-------------NPSDRISQGN-----YGKSLIIKHVEFS 97 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g~p~-----~~v~W~~~~~~i-------------~~~~~~~~~~-----~~~~L~i~~~~~~ 97 (745)
+.+.+.+|++++|.|.+.+.|. +.+.|+|++... ....++.+.. .+.+|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3456889999999999987754 589999976433 1134454432 2568999999999
Q ss_pred CCEEEEEEEEeCCeeeEEEEEEEEEEec---CeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEe-CCEeccCCCCC
Q psy11701 98 DQGSYTCEVSNGVGEAKSYSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVH-NGKPISQAPPN 172 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~~~~~~~~l~V~~~---p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~-~g~~~~~~~~~ 172 (745)
|+|.|+|.+.+... .+..+.|.|..+ |.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+......
T Consensus 83 D~G~Y~C~~~~~~~--~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~ 159 (222)
T 4i0k_A 83 DEGSYTCFVSIQDF--DSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTT 159 (222)
T ss_dssp GCSCEEEEEEECCC--CCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEE
T ss_pred cCEEEEEEEEeCCC--ceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcce
Confidence 99999999997532 224456666654 5555554 3467899999999999 788999999999 55554421111
Q ss_pred CceeecCc---eEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 173 PRRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 173 ~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
.......+ .|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 160 ~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 160 SQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp EEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred eEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeC
Confidence 11111222 378999999999999999999999999999998875
No 280
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.79 E-value=1e-18 Score=170.99 Aligned_cols=193 Identities=21% Similarity=0.308 Sum_probs=124.4
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEe---ecCCCeEEEEeCCEeccCC---------------CCCCceee------cCce
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKAS---GLPEPEIHWVHNGKPISQA---------------PPNPRRKV------GPNR 181 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~---~~p~~~v~W~~~g~~~~~~---------------~~~~~~~~------~~~~ 181 (745)
+.+...+....+.+|+++.|.|.+. +.+.+.+.|+|++...... ....+... .+..
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4456667788899999999999997 6677799999965432111 01122222 2378
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceE--EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE---eecCCCeEEEeeCC
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV---FGAPKPEVNWIHNQ 256 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~--~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~---~~~p~~~i~W~~~~ 256 (745)
|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|.. ..|....+.+|+.++|.|.+ .+.|.+.+.|++++
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~------~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP------EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC------CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec------cCCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 9999999999999999999876544 3445555542 23446778899999999999 56688899999943
Q ss_pred EE-ccC----------------------ceEEE-----eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEE-eec
Q psy11701 257 KE-LTG----------------------GRYTI-----LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEH 307 (745)
Q Consensus 257 ~~-~~~----------------------~~~~~-----~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v-~~~ 307 (745)
.. +.. .+... ...+.|.|.+++.+|+|.|+|.|.|..|.....+.|.| ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 160 GSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239 (268)
T ss_dssp TTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred CCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCC
Confidence 21 111 11222 23457999999999999999999999999888999988 445
Q ss_pred ceeecCCCcEEEecCCe
Q psy11701 308 THITDQPEDYEVEAGQS 324 (745)
Q Consensus 308 p~~~~~p~~~~~~~g~~ 324 (745)
|.+...|....+..++.
T Consensus 240 p~~~~~p~~~~~~~~q~ 256 (268)
T 3mj6_A 240 FQRTISPTPPTDKGQQG 256 (268)
T ss_dssp -----------------
T ss_pred CeeeeCCCCCCCCccee
Confidence 55555566555555544
No 281
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.79 E-value=2.2e-18 Score=167.13 Aligned_cols=185 Identities=18% Similarity=0.259 Sum_probs=125.7
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--E---ec-------------CCCCCeEecc----CC
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--V---PI-------------NPSDRISQGN----YG 86 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~---~i-------------~~~~~~~~~~----~~ 86 (745)
.+|...+..|....+.+|++|+|.|.+.+. +.+.+.|+|.. . .+ ....|+.+.. ..
T Consensus 6 ~~~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 85 (257)
T 3gkz_A 6 DDKEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQ 85 (257)
T ss_dssp ---CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTE
T ss_pred CCccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCce
Confidence 456777788888899999999999999884 47799999832 1 11 1124554432 22
Q ss_pred cEEEEccCCCCCCEEEEEEEEeCC---eeeEEEEEEEEEEec--------------CeEEecCceeEeeCCCeEEEEEEE
Q psy11701 87 KSLIIKHVEFSDQGSYTCEVSNGV---GEAKSYSIDLSVLAA--------------PYFTVEPEFINAAEEETVTFECKA 149 (745)
Q Consensus 87 ~~L~i~~~~~~d~G~Y~C~~~~~~---g~~~~~~~~l~V~~~--------------p~~~~~~~~~~v~~G~~~~l~C~~ 149 (745)
.+|.|.+++.+|+|.|+|.+.+.. .......+.|.|..+ +.+...|....+.+|++++|.|.+
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 165 (257)
T 3gkz_A 86 VYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSA 165 (257)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEE
Confidence 379999999999999999999862 112223456777654 567777888899999999999999
Q ss_pred eecCCC-eEEEEeC--CEeccC---------CCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEEEE-EEE
Q psy11701 150 SGLPEP-EIHWVHN--GKPISQ---------APPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKD-VYV 212 (745)
Q Consensus 150 ~~~p~~-~v~W~~~--g~~~~~---------~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~-~~l 212 (745)
.+.+.+ .+.|+|+ +..+.. .....++.. ....|.|.+++.+|+|.|+|.+.+........ ..|
T Consensus 166 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l 245 (257)
T 3gkz_A 166 SSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKL 245 (257)
T ss_dssp SSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEE
T ss_pred ccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEE
Confidence 987777 9999983 322210 000122211 22469999999999999999998754332222 344
Q ss_pred EEe
Q psy11701 213 NVL 215 (745)
Q Consensus 213 ~v~ 215 (745)
.|.
T Consensus 246 ~v~ 248 (257)
T 3gkz_A 246 EIK 248 (257)
T ss_dssp EEC
T ss_pred EEE
Confidence 454
No 282
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.78 E-value=7.1e-19 Score=170.00 Aligned_cols=173 Identities=16% Similarity=0.178 Sum_probs=123.2
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecC-----CCeeEEEECC--Eec------------CCCCCeEecc--CCcEEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTP-----LPQTIWSKDG--VPI------------NPSDRISQGN--YGKSLII 91 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i 91 (745)
...+...|..+.+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....|+.... ...+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455668889999999999999998887 5799999954 111 1124555432 2348999
Q ss_pred ccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEec
Q psy11701 92 KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPI 166 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~ 166 (745)
.+++.+|+|.|+|.+.+..+........|.|.. +|.+...+....+.+|+.++|.|.+.+ .|.+ .++|+|+|+.+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 999999999999999876543332334566653 566666554444557999999999988 4543 89999999987
Q ss_pred cCC-CCC-Cce------eecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 167 SQA-PPN-PRR------KVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 167 ~~~-~~~-~~~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
... ... ... ....+.|.|.++..+|+|.|+|.|.|....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 643 000 000 111245999999999999999999997644
No 283
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.78 E-value=1e-18 Score=165.55 Aligned_cols=179 Identities=16% Similarity=0.161 Sum_probs=120.5
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---c---C-----------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---I---N-----------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i---~-----------~~~~~~~~~----~~~~L~ 90 (745)
.+.+|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. + . -..|+.+.. ...+|+
T Consensus 3 ~l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (227)
T 1mju_H 3 QLQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQ 82 (227)
T ss_dssp EEECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEcCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEE
Confidence 34567778899999999999998876 6789999853 21 1 0 024655432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCE
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGK 164 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~ 164 (745)
|.+++.+|+|.|.|.+.+..+......+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .+.|++++.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 162 (227)
T 1mju_H 83 LSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSL 162 (227)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCC
Confidence 9999999999999999986433222345677764 4555544333456789999999999985 766 999999987
Q ss_pred eccCCCCCC----ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 165 PISQAPPNP----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 165 ~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
.+....... ......+.|.|.++..+| |.|+|.|.|..+.......+.+.
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 163 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 653111111 111123579999999888 99999999987765555555443
No 284
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.78 E-value=3.6e-18 Score=161.83 Aligned_cols=177 Identities=22% Similarity=0.277 Sum_probs=121.9
Q ss_pred cCceeEeeCCCeEEEEEEEeecCC-----CeEEEEeCCEeccC---------CC---CCCceee-------cCceEEEcc
Q psy11701 131 EPEFINAAEEETVTFECKASGLPE-----PEIHWVHNGKPISQ---------AP---PNPRRKV-------GPNRITIEN 186 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p~-----~~v~W~~~g~~~~~---------~~---~~~~~~~-------~~~~L~i~~ 186 (745)
.+....+.+|+++.|.|.+.+.|. ..+.|+|++..+.. .. ...+... ++..|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 345667899999999999877653 48999997643311 00 0122222 224899999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeC-CEEccCceEE
Q psy11701 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYT 265 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~-~~~~~~~~~~ 265 (745)
++.+|+|.|+|.+.+ .+.....+.|.|.. ++..........+..|+.++|.|.+.+.|.+.+.|+++ +..+......
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~-~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNA-PYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEB-CCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEE
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEEC-CCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccce
Confidence 999999999999999 56666778888874 33222111112566899999999999999999999998 5544432211
Q ss_pred -E--eecCcEEEc---ccCCCCCEEEEEEEEeCCceEEEEEEEEEeecce
Q psy11701 266 -I--LETGDLKIT---DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309 (745)
Q Consensus 266 -~--~~~~~l~i~---~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~ 309 (745)
. ..++.+.+. .+...|.|.|+|.|.|..|.....+.|.|..+|.
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 1 122222222 4456899999999999999999999999886653
No 285
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.78 E-value=7.1e-19 Score=165.41 Aligned_cols=173 Identities=21% Similarity=0.332 Sum_probs=125.5
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEecc---C------CCCCCcee----ecCceEEEccCCCCC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPIS---Q------APPNPRRK----VGPNRITIENLRKSD 191 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~---~------~~~~~~~~----~~~~~L~i~~v~~~d 191 (745)
.+...| ...+.+|++++|.|.+.+.+.+.+.|+|. +.... . .....++. ..+..|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344556 78899999999999999989999999982 22111 0 00112222 134579999999999
Q ss_pred CEEEEEEEEeCCc---eEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CC-CeEEEeeCCEEccCce
Q psy11701 192 TGNYGCNATNSLG---YVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK-PEVNWIHNQKELTGGR 263 (745)
Q Consensus 192 ~G~Y~C~~~~~~g---~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~ 263 (745)
+|.|+|.+.+..+ .....+.|.|.. .+|.+...+....+.+|+.++|.|.+.+. |. +.+.|++++..+....
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 161 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGV 161 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCc
Confidence 9999999999887 334446777763 46777766666666689999999999986 33 4899999998875421
Q ss_pred E---------EEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 264 Y---------TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300 (745)
Q Consensus 264 ~---------~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 300 (745)
. .....+.|.|.++..+|.|.|+|.|.|..+.....+
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 162 KTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred ccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 1 011124589999999999999999999987665543
No 286
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.78 E-value=4.7e-19 Score=171.42 Aligned_cols=181 Identities=17% Similarity=0.215 Sum_probs=126.3
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEec-----------------CCCCCeEeccC----CcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPI-----------------NPSDRISQGNY----GKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i-----------------~~~~~~~~~~~----~~~L~ 90 (745)
++..|....+.+|++|+|.|.+.|.+ .+.+.|+|. +..+ ....|+.+... ..+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 45677888999999999999998754 679999982 2111 01245544321 23599
Q ss_pred EccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEe---------------cCeEEecCceeEeeCCCeEEEEEEEeecCCC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------------APYFTVEPEFINAAEEETVTFECKASGLPEP 155 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~---------------~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~ 155 (745)
|.+++.+|+|.|+|.+.+..+........|.|.. +|.+...|....+.+|++++|.|.+.+.+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc
Confidence 9999999999999999886554443445677764 5677778888899999999999999987776
Q ss_pred ----eEEEEeC--CEecc---------CCCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEEE-EEEEEEe
Q psy11701 156 ----EIHWVHN--GKPIS---------QAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYK-DVYVNVL 215 (745)
Q Consensus 156 ----~v~W~~~--g~~~~---------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~-~~~l~v~ 215 (745)
.+.|+|+ +..+. ......++.. ....|.|.+++.+|+|.|+|.+.|..+.... ...|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 9999994 22211 0001122221 1346999999999999999999986543222 2455555
Q ss_pred e
Q psy11701 216 A 216 (745)
Q Consensus 216 ~ 216 (745)
.
T Consensus 244 ~ 244 (253)
T 3uzq_A 244 R 244 (253)
T ss_dssp C
T ss_pred C
Confidence 3
No 287
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=9.7e-19 Score=166.43 Aligned_cols=180 Identities=18% Similarity=0.290 Sum_probs=129.3
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.+|.+...|.. .+.+|++++|.|.+.+ +...+.|+|+|..+...............|.|.+++.+|+|.|+|.+.+..
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 83 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 83 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCC
Confidence 46778888877 7999999999999875 456899999998764211111112234689999999999999999998865
Q ss_pred ceE--EEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCC
Q psy11701 204 GYV--YKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF 279 (745)
Q Consensus 204 g~~--~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 279 (745)
+.. +..+.|.|.. .+|.+...+ ...+.+|++++|.|.+.+. .+.+.|++++..+..........+.|.|.+++.
T Consensus 84 ~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~ 161 (242)
T 1p6f_A 84 LWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTT 161 (242)
T ss_dssp EECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEECCG
T ss_pred ccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCCcc
Confidence 432 2345666653 256666555 3568899999999998754 458999999876543221222345799999999
Q ss_pred CCCEEEEEEEEeCCc---eEEEEEEEEEeec
Q psy11701 280 ADSGEYTCFARNKLG---TAQGSGSLTVKEH 307 (745)
Q Consensus 280 ~d~G~Y~C~~~n~~g---~~~~~~~l~v~~~ 307 (745)
+|+|.|+|.+.|... ..+....|.|...
T Consensus 162 ~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 162 AHRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp GGCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred ccCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 999999999988641 2345567777653
No 288
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.78 E-value=2.9e-18 Score=160.25 Aligned_cols=187 Identities=17% Similarity=0.149 Sum_probs=135.0
Q ss_pred ccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEE--Ec-cCceeEEEecccccCcce
Q psy11701 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI--VN-KGESTTTEVDKFVPASKN 476 (745)
Q Consensus 400 ~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~i~~L~~~~~Y 476 (745)
.||++|.++.+.. ....++.++|+++.. .+ ....|.|.|+..... .+.... .. ......+.+.+|.+.+.|
T Consensus 2 ~pP~~P~nl~c~~-~~~~~~~c~W~p~~~--~~-~~~~Y~l~y~~~~~~--~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y 75 (210)
T 3n06_B 2 LPPGKPEIFKCRS-PNKETFTCWWRPGTD--GG-LPTNYSLTYHREGET--LMHECPDYITGGPNSCHFGKQYTSMWRTY 75 (210)
T ss_dssp CCCCCCEEEEEEB-SSSSCEEEEEECCSS--SC-CCSEEEEEEEETTCC--CCEECSCSSTTCTTEEEECGGGCCSSSCE
T ss_pred CCCCCCeEeEEEe-CCCCeEEEEECCCCC--CC-CCceEEEEEEECCCC--ccccCCCCCCCCCeEEEeCCCCcccceeE
Confidence 5899999999987 788999999998653 22 246899998875432 222221 10 112334445679999999
Q ss_pred eEEEEEecCCCCCCCCcceEEeCCC-CCCCCCCceeEEEcC----CceEEEEeeCCCCCC---C-ceeeEEEEEEEcCCc
Q psy11701 477 FARVLAFNGAYNGPPSEIISFVTPE-GVPGTVQSLEAIPLG----SSAFYLKWVKPEQPN---G-VLMGYKIKYQSVKGT 547 (745)
Q Consensus 477 ~~~V~a~n~~G~g~~S~~~~~~t~~-~~P~~p~~~~~~~~~----~~~i~l~W~~p~~~~---g-~i~~Y~v~~~~~~~~ 547 (745)
.|+|.|.|..|.+. +..+.+.+.. ..|++|.++.+.... .+++.|+|++|...+ | .+.+|.|+|+..+..
T Consensus 76 ~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~ 154 (210)
T 3n06_B 76 IMMVNATNQMGSSF-SDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA 154 (210)
T ss_dssp EEEEEEEETTEEEE-CCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS
T ss_pred EEEEEEEcCCCCee-CCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC
Confidence 99999999999884 4445555443 468889889887653 589999999987532 4 579999999987654
Q ss_pred ccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCC-CCCcceeeec
Q psy11701 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD-GAESKYLFYV 600 (745)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~-g~~S~~~~~~ 600 (745)
.|... . ......+.|.+|.|++.|.|+|+|.+..|. |.+|..+.+.
T Consensus 155 ~~~~~------~-~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~ 201 (210)
T 3n06_B 155 EWEIH------F-AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQ 201 (210)
T ss_dssp SCEEE------E-EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEE
T ss_pred CCEEE------e-ccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEE
Confidence 33211 1 234578999999999999999999998776 7777655443
No 289
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.78 E-value=1.3e-18 Score=165.23 Aligned_cols=178 Identities=17% Similarity=0.214 Sum_probs=128.2
Q ss_pred eeccceeEecCCcEEEEEEEeecCCC---eeEEEECCEecC----------------CCCCeEe---------ccCCcEE
Q psy11701 38 VTRKKEVALRNKKVELFCIFGGTPLP---QTIWSKDGVPIN----------------PSDRISQ---------GNYGKSL 89 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~i~----------------~~~~~~~---------~~~~~~L 89 (745)
..|.++.+..|++|+|.|.+.+.+.+ .|+|+|++..+. ...+..+ ...+.+|
T Consensus 6 ~vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL 85 (225)
T 4fmk_A 6 RVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATL 85 (225)
T ss_dssp ECCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCE
T ss_pred EeCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEE
Confidence 34566789999999999999887766 489999764331 0112221 1223579
Q ss_pred EEccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEe-ecCCCeEEEEeCCEeccC
Q psy11701 90 IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS-GLPEPEIHWVHNGKPISQ 168 (745)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~g~~~~~ 168 (745)
.|.+++.+|+|.|+|.+.+..+........+.+..+|.+...+.......++.+.+.|.+. +.|++.+.|++++..+..
T Consensus 86 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~ 165 (225)
T 4fmk_A 86 AFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAK 165 (225)
T ss_dssp EECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEE
T ss_pred EEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccC
Confidence 9999999999999999998777666666778888888777777777778888888888774 578889999998765431
Q ss_pred CCC----CCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEE--EEEEEEe
Q psy11701 169 APP----NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVL 215 (745)
Q Consensus 169 ~~~----~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~--~~~l~v~ 215 (745)
... ........+.|.|.++..+|+|.|+|.|.|..+.... .+.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 166 DTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred CcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 110 0011111246999999999999999999998776543 4444443
No 290
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.78 E-value=4.2e-18 Score=160.85 Aligned_cols=175 Identities=14% Similarity=0.207 Sum_probs=127.1
Q ss_pred ecCceeEeeCCCeEEEEEEEeecCCC---eEEEEeCCEeccCC---------------CCCCce-------eecCceEEE
Q psy11701 130 VEPEFINAAEEETVTFECKASGLPEP---EIHWVHNGKPISQA---------------PPNPRR-------KVGPNRITI 184 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p~~---~v~W~~~g~~~~~~---------------~~~~~~-------~~~~~~L~i 184 (745)
..|....+.+|++++|.|.+.+.|.+ .|+|+|++..+... ....+. ...+.+|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 34677889999999999999987765 48999987544210 001111 112357999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEE-EEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCce
Q psy11701 185 ENLRKSDTGNYGCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~~~~~-~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~ 263 (745)
.+++.+|+|.|.|.+.+..+..... ..+.+...++.....+....+..|+.+.+.|.+.+.|.+.|.|++++..+....
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc
Confidence 9999999999999998866654443 444444444444555566677789999999999999999999999987664332
Q ss_pred EEEe-----ecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 264 YTIL-----ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 264 ~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
.... ..+.|.|.++..+|.|.|+|.|.|..|.....+.+.|
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 2221 1236999999999999999999999987655555544
No 291
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=2.5e-18 Score=168.93 Aligned_cols=181 Identities=18% Similarity=0.277 Sum_probs=127.7
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--EecC-----------------CCCCeEecc----CCcE
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPIN-----------------PSDRISQGN----YGKS 88 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i~-----------------~~~~~~~~~----~~~~ 88 (745)
..++..|....+.+|++|+|.|.+.|.+ .+.+.|+|++ ..+. ...|+.+.. ...+
T Consensus 27 ~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 106 (282)
T 1qok_A 27 QVKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAY 106 (282)
T ss_dssp CCEEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEE
T ss_pred eEEEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEE
Confidence 3456778899999999999999998875 5799999953 1110 124555432 2358
Q ss_pred EEEccCCCCCCEEEEEEEEeCCe---e-eEEEEEEEEEEec---------------CeEEecCceeEeeCCCeEEEEEEE
Q psy11701 89 LIIKHVEFSDQGSYTCEVSNGVG---E-AKSYSIDLSVLAA---------------PYFTVEPEFINAAEEETVTFECKA 149 (745)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~g---~-~~~~~~~l~V~~~---------------p~~~~~~~~~~v~~G~~~~l~C~~ 149 (745)
|.|.+++.+|+|.|+|.+.+..| . .....+.|.|..+ +.+...|....+.+|++++|.|.+
T Consensus 107 L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 186 (282)
T 1qok_A 107 LQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSA 186 (282)
T ss_dssp EEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEE
T ss_pred EEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEe
Confidence 99999999999999999998765 1 1223356777654 345666778889999999999999
Q ss_pred eecCCCeEEEEe--CCEeccC---------CCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEE-EEEEEE
Q psy11701 150 SGLPEPEIHWVH--NGKPISQ---------APPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVY-KDVYVN 213 (745)
Q Consensus 150 ~~~p~~~v~W~~--~g~~~~~---------~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~ 213 (745)
.+.+ +.+.|+| +|..+.. .....++.. ....|.|.++..+|+|.|+|.+.+..+... ....|.
T Consensus 187 ~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~ 265 (282)
T 1qok_A 187 SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLE 265 (282)
T ss_dssp SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEE
T ss_pred cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEE
Confidence 9888 8999999 5654310 001122221 235799999999999999999987543222 224555
Q ss_pred Ee
Q psy11701 214 VL 215 (745)
Q Consensus 214 v~ 215 (745)
|.
T Consensus 266 V~ 267 (282)
T 1qok_A 266 LK 267 (282)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 292
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.77 E-value=8.9e-18 Score=162.55 Aligned_cols=172 Identities=17% Similarity=0.213 Sum_probs=122.3
Q ss_pred eeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Eec-------------CCCCCeEec----cCCcEEEEccCC
Q psy11701 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPI-------------NPSDRISQG----NYGKSLIIKHVE 95 (745)
Q Consensus 35 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i-------------~~~~~~~~~----~~~~~L~i~~~~ 95 (745)
.+...|..+.+.+|++++|.|.+.+.|.+.+.|+|.. ..+ ....++... ....+|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3455677888999999999999998999999999832 111 112344431 223479999999
Q ss_pred CCCCEEEEEEEEeCCee---eEEEEEEEEEEe--------------------cCeEEecCceeEeeCCCeEEEEEEEeec
Q psy11701 96 FSDQGSYTCEVSNGVGE---AKSYSIDLSVLA--------------------APYFTVEPEFINAAEEETVTFECKASGL 152 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~---~~~~~~~l~V~~--------------------~p~~~~~~~~~~v~~G~~~~l~C~~~~~ 152 (745)
.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...|....+.+|++++|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 99999999999986431 122335666664 6677888888889999999999999875
Q ss_pred CCCeEEEEeCC--Eec---cC---------CCCCCcee-----ecCceEEEccCCCCCCEEEEEEEEeCCceEE
Q psy11701 153 PEPEIHWVHNG--KPI---SQ---------APPNPRRK-----VGPNRITIENLRKSDTGNYGCNATNSLGYVY 207 (745)
Q Consensus 153 p~~~v~W~~~g--~~~---~~---------~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~ 207 (745)
.+.+.|+|.. ..+ .. .....++. .....|.|.+++.+|+|.|+|.|.|..|...
T Consensus 165 -~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~ 237 (256)
T 3tf7_C 165 -HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLY 237 (256)
T ss_dssp -CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEE
T ss_pred -ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccE
Confidence 6799999832 111 00 00011111 1234899999999999999999999877543
No 293
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.77 E-value=1.8e-18 Score=167.54 Aligned_cols=181 Identities=18% Similarity=0.214 Sum_probs=125.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEe---c--------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVP---I--------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~---i--------------~~~~~~~~~~----~~~~L~ 90 (745)
.+..+....+.+|++|+|.|.+.+.+ .+.+.|+|. +.. + ....|+.+.. ...+|.
T Consensus 5 ~v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 84 (256)
T 3umt_A 5 QLQQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLE 84 (256)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred eEEccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEE
Confidence 44556667899999999999998865 679999983 211 1 0124454432 223699
Q ss_pred EccCCCCCCEEEEEEEEeCC---eeeEEEEEEEEEEe----------------cCeEEecCceeEeeCCCeEEEEEEEee
Q psy11701 91 IKHVEFSDQGSYTCEVSNGV---GEAKSYSIDLSVLA----------------APYFTVEPEFINAAEEETVTFECKASG 151 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~---g~~~~~~~~l~V~~----------------~p~~~~~~~~~~v~~G~~~~l~C~~~~ 151 (745)
|.+++.+|+|.|.|.+.+.. .......+.|.|.. +|.+...|....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 164 (256)
T 3umt_A 85 LRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQ 164 (256)
T ss_dssp ECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEec
Confidence 99999999999999998761 11222345677764 667778888889999999999999999
Q ss_pred cCCCeEEEEeC--CEecc---------CCCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCceEEE-EEEEEEe
Q psy11701 152 LPEPEIHWVHN--GKPIS---------QAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYK-DVYVNVL 215 (745)
Q Consensus 152 ~p~~~v~W~~~--g~~~~---------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~-~~~l~v~ 215 (745)
.+.+.+.|+|+ +..+. ......++.. ....|.|.+++.+|+|.|+|.+.+....... ...|.|.
T Consensus 165 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 165 DIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp CCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEE
Confidence 88889999994 22111 0001122221 2246999999999999999999986543322 2566665
Q ss_pred e
Q psy11701 216 A 216 (745)
Q Consensus 216 ~ 216 (745)
.
T Consensus 245 ~ 245 (256)
T 3umt_A 245 R 245 (256)
T ss_dssp -
T ss_pred C
Confidence 4
No 294
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.77 E-value=1.8e-18 Score=156.27 Aligned_cols=158 Identities=14% Similarity=0.207 Sum_probs=116.0
Q ss_pred eeEeeCCCeEEEEEEEee--cCCCeEEEEeCCEeccCC-------CCCCceee-cCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 134 FINAAEEETVTFECKASG--LPEPEIHWVHNGKPISQA-------PPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~~~~--~p~~~v~W~~~g~~~~~~-------~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
...+.+|++++|.|...+ .+.+.|.|+|++..+... ....+... .++.|.|.+++.+|+|.|+|.+.|..
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 345789999999995432 456699999999755310 01223333 45679999999999999999999998
Q ss_pred ceE--EEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCC
Q psy11701 204 GYV--YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281 (745)
Q Consensus 204 g~~--~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 281 (745)
|.. ...+.|.|...+. .......+..++|.|.+.+.|.+.+.|++++..+.. ...+.|..+..+|
T Consensus 85 g~~~~~~~~~l~V~~~~~------~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~-------~~~~~i~~~~~~d 151 (176)
T 1hng_A 85 GTRILNKALDLRILEMVS------KPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRS-------LRQKTMSYQWTNL 151 (176)
T ss_dssp CCEEEEEEEEEEEECCCC------CCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEE-------ESSSEEEEECSCC
T ss_pred CCEEEEEEEEEEEeCCCC------CCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCC-------CCcEEEEEEEccC
Confidence 886 5557777764211 011122355699999999999999999999987643 2235666788999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEE
Q psy11701 282 SGEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 282 ~G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
.|.|+|.|.|..|.......|.+
T Consensus 152 ~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 152 RAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SSCEEEEEEETTEEEEEEECCCC
T ss_pred CeEEEEEEEecCCCceecccccC
Confidence 99999999999998877765543
No 295
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.77 E-value=1.9e-18 Score=154.90 Aligned_cols=150 Identities=17% Similarity=0.220 Sum_probs=112.9
Q ss_pred cceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC------------CCCeEeccCCcEEEEccCCCCCCEEEEEEEEe
Q psy11701 41 KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP------------SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~------------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
+.+.+.+|++|+|.|.+. .|.+.|.|+|++..|.. .+|+.+...+++|+|.+++.+|+|.|+|.+.+
T Consensus 3 ~~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred cEEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 456789999999999985 47889999998865421 23566655667899999999999999999987
Q ss_pred CCeeeEEEEEEEEEEecC---eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEc
Q psy11701 109 GVGEAKSYSIDLSVLAAP---YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p---~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~ 185 (745)
..| +..+.|.|..++ .+..... ...|.|.+.+.|.+.++|+++|..+... ....|.+.
T Consensus 82 ~~~---~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~~~--------~~~~l~~~ 142 (171)
T 1ccz_A 82 ITD---TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLRSL--------RQKTMSYQ 142 (171)
T ss_dssp CCS---CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEEEE--------SSSEEEEE
T ss_pred CCC---cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECcCC--------cceEEEEe
Confidence 766 366888887653 2222211 1379999998899999999999988622 12244444
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 186 NLRKSDTGNYGCNATNSLGYVYKDVYV 212 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~~~~~~~l 212 (745)
..+|+|.|+|.|.|..+.....+.|
T Consensus 143 --~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 143 --WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp --CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred --ccCCCceEEEEEEcccCcccceeEE
Confidence 3788999999999999887665544
No 296
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.77 E-value=4.3e-19 Score=165.50 Aligned_cols=172 Identities=16% Similarity=0.232 Sum_probs=120.1
Q ss_pred CCeeEeecccee-EecCCcEEEEEEEeecC---C-CeeEEEECCEecCCCC---CeEecc----CCcEEEEccCCCCCCE
Q psy11701 33 PKQQYVTRKKEV-ALRNKKVELFCIFGGTP---L-PQTIWSKDGVPINPSD---RISQGN----YGKSLIIKHVEFSDQG 100 (745)
Q Consensus 33 p~~~~~~~~~~~-v~~G~~~~l~C~~~g~p---~-~~v~W~~~~~~i~~~~---~~~~~~----~~~~L~i~~~~~~d~G 100 (745)
|..++..|.... +.+|++++|.|.+.|.+ . ..|.|+|++..+.... ...+.. ....|.|.+++.+|+|
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 81 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTC
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCC
Confidence 556666666655 89999999999998884 2 4899999998775321 001111 1247999999999999
Q ss_pred EEEEEEEeCCeee-EEEEEEE--EEEecCeEEecCceeEeeCCCeEEEEEEEee-cCC-CeEEEEeCCEeccCCCCCCce
Q psy11701 101 SYTCEVSNGVGEA-KSYSIDL--SVLAAPYFTVEPEFINAAEEETVTFECKASG-LPE-PEIHWVHNGKPISQAPPNPRR 175 (745)
Q Consensus 101 ~Y~C~~~~~~g~~-~~~~~~l--~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~-~~v~W~~~g~~~~~~~~~~~~ 175 (745)
.|+|.|.+..+.. ....+.+ .+..+|.+...+......+|+.+.|.|.+.| .|. +.++|+|||..+.........
T Consensus 82 ~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 161 (207)
T 2vol_A 82 EFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPI 161 (207)
T ss_dssp CEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCE
T ss_pred EEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCce
Confidence 9999999887643 2234444 5566888766655433456999999999998 455 499999999987532211111
Q ss_pred eecCc------eEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 176 KVGPN------RITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 176 ~~~~~------~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
...++ .|.|.....+|.|.|+|.|.|...
T Consensus 162 ~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 162 MDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 22233 355666666789999999999754
No 297
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.77 E-value=1e-18 Score=159.65 Aligned_cols=145 Identities=16% Similarity=0.320 Sum_probs=110.2
Q ss_pred EeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEcc-CCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 136 NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN-LRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 136 ~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
...+|+++.|.|.+.+ +. .++|+|+|..+... .+..|.|.+ ++.+|+|.|+|.|.|..|.....+.+.|
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~--------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK--------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC--------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC--------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 3468999999999987 43 59999999998743 245899999 9999999999999999887555555444
Q ss_pred eecCCee-----------------e--eCC--Cc---eEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecC
Q psy11701 215 LAHAPEI-----------------T--EAP--KD---EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG 270 (745)
Q Consensus 215 ~~~~p~~-----------------~--~~~--~~---~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 270 (745)
....+.. . ..+ .. ..+.+|+.+.|.|.+ |.+.+.|++++..+..... ..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---~~~ 153 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---TKN 153 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---CSS
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---Ccc
Confidence 3211110 0 000 01 123489999999998 7789999999998864321 456
Q ss_pred cEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 271 DLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 271 ~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
.|.|.++..+|+|.|+|.|.|..|..
T Consensus 154 ~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 154 TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999999999999999987765
No 298
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.77 E-value=2.6e-18 Score=162.28 Aligned_cols=174 Identities=16% Similarity=0.196 Sum_probs=122.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---c---CC-------------CCCeEecc----CCcE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---I---NP-------------SDRISQGN----YGKS 88 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i---~~-------------~~~~~~~~----~~~~ 88 (745)
.+..|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. + .. ..|+.+.. ...+
T Consensus 3 ~v~~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 82 (220)
T 1pz5_B 3 KVEESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVY 82 (220)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEE
T ss_pred eEeccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEE
Confidence 34567778899999999999998766 6799999853 21 1 00 24655432 2238
Q ss_pred EEEccCCCCCCEEEEEEEEeCCeee--EEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEE
Q psy11701 89 LIIKHVEFSDQGSYTCEVSNGVGEA--KSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWV 160 (745)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~g~~--~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~ 160 (745)
|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |.+ .++|+
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 162 (220)
T 1pz5_B 83 LQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWN 162 (220)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEG
T ss_pred EEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEe
Confidence 9999999999999999999865322 1133566665 35666555544456789999999999986 888 99999
Q ss_pred eCCEeccCCCCCC----ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 161 HNGKPISQAPPNP----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210 (745)
Q Consensus 161 ~~g~~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~ 210 (745)
+++.......... ......+.|.|.++..+| |.|+|.|.|..|.....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 163 YGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp GGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 9886421000000 111224578999998866 999999999998765544
No 299
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.77 E-value=3.3e-18 Score=162.41 Aligned_cols=172 Identities=21% Similarity=0.283 Sum_probs=116.9
Q ss_pred ceeEeeCCCeEEEEEEEeecCCC---eEEEEeCCEe-----------ccCC---CCCCcee-------ecCceEEEccCC
Q psy11701 133 EFINAAEEETVTFECKASGLPEP---EIHWVHNGKP-----------ISQA---PPNPRRK-------VGPNRITIENLR 188 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~~~p~~---~v~W~~~g~~-----------~~~~---~~~~~~~-------~~~~~L~i~~v~ 188 (745)
..+.+.+|++++|.|.+.+.+.+ .|+|+|++.. +... ....+.. .++..|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34678999999999999875544 7999987632 1111 1111111 124579999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeec-CCCeEEEeeCCEE-ccCceE--
Q psy11701 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHNQKE-LTGGRY-- 264 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~~i~W~~~~~~-~~~~~~-- 264 (745)
.+|+|.|+|.|.|..|.....+.+.+.. .+...+....+.+|+.+.|.|.+.+. |.+.|.|++++.. +.....
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~---~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAA---LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEB---CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecc---ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE
Confidence 9999999999999888776665555432 22233334567889999999999884 8899999996544 332221
Q ss_pred EEeecCc---EEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy11701 265 TILETGD---LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307 (745)
Q Consensus 265 ~~~~~~~---l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~ 307 (745)
....++. +.+..++.+|+|.|+|.|.|..|.....+.|.|.++
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 2222332 334466789999999999999999988888888653
No 300
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.77 E-value=7.6e-19 Score=164.62 Aligned_cols=170 Identities=17% Similarity=0.203 Sum_probs=119.3
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEEC--CEecC----------------CCCCeEecc----CCcEEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKD--GVPIN----------------PSDRISQGN----YGKSLII 91 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~i~----------------~~~~~~~~~----~~~~L~i 91 (745)
.+..|....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...|+.+.. ...+|.|
T Consensus 3 ~v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 82 (210)
T 3d9a_H 3 QLQESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDL 82 (210)
T ss_dssp EEEEESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred eEecCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEE
Confidence 34557778899999999999998875 479999985 22210 134555432 1248999
Q ss_pred ccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCEe
Q psy11701 92 KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGKP 165 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~~ 165 (745)
.+++.+|+|.|+|.+.+.. .......|.|. .+|.+...+....+.+|+.++|.|.+.|. |.+ .+.|++++..
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 160 (210)
T 3d9a_H 83 NSVTTEDTATYYCANWDGD--YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160 (210)
T ss_dssp CSCCGGGCEEEEEEETTSS--CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CCCCcccCEEEEEEEecCc--ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcc
Confidence 9999999999999998753 11122456665 35666555444457799999999999986 887 9999999876
Q ss_pred ccCCCCCCc----eeecCceEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy11701 166 ISQAPPNPR----RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208 (745)
Q Consensus 166 ~~~~~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~ 208 (745)
+........ .....+.|.|.++..+| |.|+|.|.|..|....
T Consensus 161 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 161 SGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred cceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 431111111 11123468999998877 9999999999886543
No 301
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.77 E-value=4.9e-18 Score=153.67 Aligned_cols=153 Identities=16% Similarity=0.242 Sum_probs=112.8
Q ss_pred cceeEecCCcEEEEEEEee-cCCCeeEEEEC-CEecC------------CC--CCeEeccCCcEEEEccCCCCCCEEEEE
Q psy11701 41 KKEVALRNKKVELFCIFGG-TPLPQTIWSKD-GVPIN------------PS--DRISQGNYGKSLIIKHVEFSDQGSYTC 104 (745)
Q Consensus 41 ~~~~v~~G~~~~l~C~~~g-~p~~~v~W~~~-~~~i~------------~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C 104 (745)
..+.+.+|++|+|.|.+.+ .+.+.|.|+|+ +..|. .. +|+.++..+++|+|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4567999999999999854 34679999994 32221 11 567775566789999999999999999
Q ss_pred EEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEE-eecCCCeEEEEeCCEeccCCCCCCceeecCceEE
Q psy11701 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183 (745)
Q Consensus 105 ~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~ 183 (745)
.+.+.. .....+.|.|..++. .| . ....++.++|.|.+ .+ |.+.+.|++++..+. ...+.+|.
T Consensus 87 ~v~~~~--~~~~~~~L~V~~~~~---~P-~-i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~--------~~~~~~l~ 150 (180)
T 2dru_A 87 RMLHET--EDQWKITMEVYEMVS---KP-M-IYWECSNATLTCEVLEG-TDVELKLYQGKEHLR--------SLRQKTMS 150 (180)
T ss_dssp EEESSS--EEEEEEEEEEECCCC---CC-E-EEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE--------EESSSEEE
T ss_pred EEEcCC--eEEEEEEEEEECCCC---CC-E-EEecCCCEEEEEEeCCC-CCCEEEEEECCeECc--------CCCCCEEE
Confidence 998765 444668888876431 11 1 11245679999999 66 889999999999875 12345666
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVYKDVY 211 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~~~~~ 211 (745)
+.. .+|+|.|+|.|.|..+.......
T Consensus 151 ~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 151 YQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp EEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred EEE--hhcCccEEEEEecCcCcccccee
Confidence 633 78999999999999987765543
No 302
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.77 E-value=4.7e-18 Score=164.68 Aligned_cols=174 Identities=17% Similarity=0.245 Sum_probs=123.8
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--Eec-----------------CCCCCeEec--c--C
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VPI-----------------NPSDRISQG--N--Y 85 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~i-----------------~~~~~~~~~--~--~ 85 (745)
.+|..+...+..+.+.+|++|+|.|.+.+. +.+.+.|+|.. ..+ ....|+.+. . .
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 456778889999999999999999999873 67799999732 111 012455544 2 2
Q ss_pred CcEEEEccCCCCCCEEEEEEEEeC-----------CeeeEEEEEEEEEEe---------------cCeEEecCceeEeeC
Q psy11701 86 GKSLIIKHVEFSDQGSYTCEVSNG-----------VGEAKSYSIDLSVLA---------------APYFTVEPEFINAAE 139 (745)
Q Consensus 86 ~~~L~i~~~~~~d~G~Y~C~~~~~-----------~g~~~~~~~~l~V~~---------------~p~~~~~~~~~~v~~ 139 (745)
..+|+|.+++.+|+|.|.|.+.+. ..........|.|.. +|.+...|....+.+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 163 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSP 163 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECT
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeC
Confidence 237999999999999999999875 122222445677766 456777788899999
Q ss_pred CCeEEEEEEEeecCC-CeEEEEeC--CEeccC---------CCCCCceee----cCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 140 EETVTFECKASGLPE-PEIHWVHN--GKPISQ---------APPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 140 G~~~~l~C~~~~~p~-~~v~W~~~--g~~~~~---------~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
|++++|.|.+.+.+. +.+.|+|. +..+.. .....++.. ....|.|.+++.+|+|.|+|.|.|..
T Consensus 164 G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 164 GERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp TSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 999999999988776 89999983 222110 001122221 23469999999999999999998854
Q ss_pred c
Q psy11701 204 G 204 (745)
Q Consensus 204 g 204 (745)
.
T Consensus 244 ~ 244 (256)
T 3juy_B 244 S 244 (256)
T ss_dssp C
T ss_pred C
Confidence 3
No 303
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=164.73 Aligned_cols=164 Identities=16% Similarity=0.138 Sum_probs=106.0
Q ss_pred CcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceEEeCCCCCCCCCCc
Q psy11701 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509 (745)
Q Consensus 430 ~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~~~P~~p~~ 509 (745)
..++.|++|.|++.... ........ ......+++.+|.|++.|.|+|+|.|..|.|++|....+.+....|..|..
T Consensus 17 ~~~~~Vt~Y~~~~~~~~---~~~~~~~~-~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~ 92 (232)
T 4go6_B 17 GTNVMVTHYFLPPDDAV---PSDDDLGT-VPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPC 92 (232)
T ss_dssp SSEEEECEEECCCC----------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCE
T ss_pred CCCEEEEEEEEEeeCCC---CCcEEEEE-CCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCe
Confidence 34566888888553322 12222222 445678999999999999999999999999999998888776554444445
Q ss_pred eeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccc--------cccccC-------CCcceeeecCCCC
Q psy11701 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER--------LPYISD-------PTTTSAKLAGLEP 574 (745)
Q Consensus 510 ~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~-------~~~~~~~l~~L~p 574 (745)
+.....+.++|.|+|.+|.+.||+|++|.|+|+..+.......... ...... .....+.+.+|.+
T Consensus 93 ~~~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 172 (232)
T 4go6_B 93 AIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTT 172 (232)
T ss_dssp EEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESS
T ss_pred eeEEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCcc
Confidence 5556668899999999999889999999999987655432221100 000000 1112344568999
Q ss_pred CccEEEEEEEEecCCCCCCccee
Q psy11701 575 STKYRIHLAGYTKAGDGAESKYL 597 (745)
Q Consensus 575 ~t~Y~~~V~a~n~~G~g~~S~~~ 597 (745)
++.|.|||.|+|.+|.|++|+..
T Consensus 173 ~t~Y~frV~A~N~~G~Gp~S~v~ 195 (232)
T 4go6_B 173 KPAIIFRIAARNEKGYGPATQVR 195 (232)
T ss_dssp SEEEEEEEEEECSSCBCCCEEEE
T ss_pred CCceEEEEEEECCCcCCCCcccE
Confidence 99999999999999999998754
No 304
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.77 E-value=8.4e-19 Score=165.96 Aligned_cols=175 Identities=15% Similarity=0.157 Sum_probs=122.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---c----------------CCCCCeEecc----CCcE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---I----------------NPSDRISQGN----YGKS 88 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i----------------~~~~~~~~~~----~~~~ 88 (745)
.+.+|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. + ....|+.+.. ...+
T Consensus 3 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 82 (222)
T 1q9r_B 3 KLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILY 82 (222)
T ss_dssp EEEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEE
T ss_pred eEecCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEE
Confidence 34566777899999999999998765 6789999842 21 1 0124555532 2348
Q ss_pred EEEccCCCCCCEEEEEEEEeCCee----eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEE
Q psy11701 89 LIIKHVEFSDQGSYTCEVSNGVGE----AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIH 158 (745)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~g~----~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~ 158 (745)
|+|.+++.+|+|.|.|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .+.
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 162 (222)
T 1q9r_B 83 LQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 162 (222)
T ss_dssp EEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEE
Confidence 999999999999999999876431 111234566653 4666554444446789999999999985 888 999
Q ss_pred EEeCCEeccCCCCC----CceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy11701 159 WVHNGKPISQAPPN----PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211 (745)
Q Consensus 159 W~~~g~~~~~~~~~----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~ 211 (745)
|+++|..+...... .......+.|.|.++..+| |.|+|.|.|..|.......
T Consensus 163 W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 163 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp EGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 99998765421000 0011123478999999999 9999999999887554433
No 305
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.77 E-value=4.3e-18 Score=164.49 Aligned_cols=167 Identities=17% Similarity=0.202 Sum_probs=117.8
Q ss_pred eeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCE-----e---------cCCCCCeEecc--CCcEEEEccCCCCC
Q psy11701 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGV-----P---------INPSDRISQGN--YGKSLIIKHVEFSD 98 (745)
Q Consensus 35 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~-----~---------i~~~~~~~~~~--~~~~L~i~~~~~~d 98 (745)
.+...|..+.+.+|++++|.|.+.+.|.+.+.|+|+.. . .....++.... ...+|.|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 34556778889999999999999999999999998431 1 11134554332 22379999999999
Q ss_pred CEEEEEEEEeCCeeeEEEEEEEEEEec-------------------CeEEecCceeEeeCCCeEEEEEEEeecC--CCeE
Q psy11701 99 QGSYTCEVSNGVGEAKSYSIDLSVLAA-------------------PYFTVEPEFINAAEEETVTFECKASGLP--EPEI 157 (745)
Q Consensus 99 ~G~Y~C~~~~~~g~~~~~~~~l~V~~~-------------------p~~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v 157 (745)
+|.|+|.+.+..+........|.|..+ +.+...+....+.+|++++|.|.+.+.+ .+.+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 165 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWM 165 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEE
Confidence 999999998865544434456666543 3344556677899999999999998866 6799
Q ss_pred EEEeC--CEeccCC--------------CCCCceeec------CceEEEccCCCCCCEEEEEEEEe
Q psy11701 158 HWVHN--GKPISQA--------------PPNPRRKVG------PNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 158 ~W~~~--g~~~~~~--------------~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
.|+|+ +..+... ....++... ...|.|.+++.+|+|.|+|.+.+
T Consensus 166 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 166 NWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 99997 4332100 001222221 23699999999999999999997
No 306
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.77 E-value=2.9e-19 Score=168.16 Aligned_cols=175 Identities=14% Similarity=0.259 Sum_probs=118.1
Q ss_pred CCCCCeeEeecccee-EecCCcEEEEEEEeec---CC-CeeEEEECCEecCCCCCeE--ecc-----CCcEEEEccCCCC
Q psy11701 30 RHAPKQQYVTRKKEV-ALRNKKVELFCIFGGT---PL-PQTIWSKDGVPINPSDRIS--QGN-----YGKSLIIKHVEFS 97 (745)
Q Consensus 30 ~~~p~~~~~~~~~~~-v~~G~~~~l~C~~~g~---p~-~~v~W~~~~~~i~~~~~~~--~~~-----~~~~L~i~~~~~~ 97 (745)
..+|..++.+|.... +.+|++++|.|.+.|. |. +.|.|+|++..+....... ... ..+.|.|.+++.+
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 445666655444443 8999999999999887 33 6999999998876332110 001 1247999999999
Q ss_pred CCEEEEEEEEeCCeee-EEEEEEE--EEEecCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEeccCCCCC
Q psy11701 98 DQGSYTCEVSNGVGEA-KSYSIDL--SVLAAPYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPISQAPPN 172 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~~-~~~~~~l--~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~~~~~~~ 172 (745)
|+|.|+|.|.+..+.. ....+.+ .+..+|.+...+......+|+.++|.|.+.| .|.+ .++|+|+|..+......
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 166 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDT 166 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceec
Confidence 9999999999976643 2233322 4556787766554433346999999999998 5765 99999999987532111
Q ss_pred CceeecCc------eEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 173 PRRKVGPN------RITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 173 ~~~~~~~~------~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
......++ .|.|.....+|.|.|+|.|.|...
T Consensus 167 ~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 167 APVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred ccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 11112333 344555555569999999999764
No 307
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.77 E-value=4e-18 Score=166.97 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=120.1
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCE-----ec---------CCCCCeEecc--CCcEEEEccCCC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGV-----PI---------NPSDRISQGN--YGKSLIIKHVEF 96 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~-----~i---------~~~~~~~~~~--~~~~L~i~~~~~ 96 (745)
...+...|..+.+.+|++++|.|.+.+.|.+.+.|+|++. .+ ....|+.... ...+|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 3445667888999999999999999988888999998541 11 1134555432 234899999999
Q ss_pred CCCEEEEEEEEeCCeeeEEEEEEEEEEecC--------------eEEecCceeEeeCCCeEEEEEEEeecC--CCeEEEE
Q psy11701 97 SDQGSYTCEVSNGVGEAKSYSIDLSVLAAP--------------YFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160 (745)
Q Consensus 97 ~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p--------------~~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~ 160 (745)
+|+|.|+|.+.+..+......+.|.|..+| .+...|....+.+|++++|.|.+.+.+ .+.+.|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 999999999988654323233456665543 234446677899999999999999866 4799999
Q ss_pred eCC--Eec---c-----------CCCCCCceeec------CceEEEccCCCCCCEEEEEEEEeC
Q psy11701 161 HNG--KPI---S-----------QAPPNPRRKVG------PNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 161 ~~g--~~~---~-----------~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
|++ ..+ . ......++... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 172 k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 172 RQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 963 211 0 01112233221 238999999999999999999997
No 308
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.77 E-value=1.7e-19 Score=172.29 Aligned_cols=171 Identities=15% Similarity=0.214 Sum_probs=101.7
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCCCC
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVEFS 97 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~~~ 97 (745)
..+...|..+.+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....|+.... ...+|.|.+++.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 34455688889999999999999998887899999853 211 0022333221 2237999999999
Q ss_pred CCEEEEEEEEeCCeeeEEEEEEEEEEe---cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCEeccCC-CC
Q psy11701 98 DQGSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGKPISQA-PP 171 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~~~~~~~~l~V~~---~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~~~~~~-~~ 171 (745)
|+|.|+|.+.+..+........|.|.. +|.+...+......+|++++|.|.+.|. |.+ .++|+|+|..+... ..
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 183 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 183 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEE
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceE
Confidence 999999999876543332334566654 6777665544444579999999999884 443 79999999887643 00
Q ss_pred -------CCceeecCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 172 -------NPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 172 -------~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
........+.|.|..+..+|+|.|+|.|.|...
T Consensus 184 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 184 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred ecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 000111224689999999999999999998743
No 309
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.77 E-value=2e-19 Score=170.15 Aligned_cols=174 Identities=20% Similarity=0.219 Sum_probs=124.8
Q ss_pred eccceeEecCCcEEEEEEEee-cCCCe----eEEEECCEecC-------------CCCCeEecc-------CCcEEEEcc
Q psy11701 39 TRKKEVALRNKKVELFCIFGG-TPLPQ----TIWSKDGVPIN-------------PSDRISQGN-------YGKSLIIKH 93 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~g-~p~~~----v~W~~~~~~i~-------------~~~~~~~~~-------~~~~L~i~~ 93 (745)
.|..+.+.+|++++|.|.+.+ .+.+. +.|+|++.... ...|+.+.. .+.+|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 455677899999999999944 44444 99999864321 134444433 356899999
Q ss_pred CCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEE-EEEEEe-ecCCCeEEEEeCCEeccCCCC
Q psy11701 94 VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVT-FECKAS-GLPEPEIHWVHNGKPISQAPP 171 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~-l~C~~~-~~p~~~v~W~~~g~~~~~~~~ 171 (745)
++.+|+|.|+|.+.+......+..+.|.|..+|.+...+.... .+|+.+. |.|.+. +.|.+.++|++++........
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEE
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccce
Confidence 9999999999999987623334778889988998876554444 6888884 999987 789999999997544331110
Q ss_pred ----CCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy11701 172 ----NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213 (745)
Q Consensus 172 ----~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~ 213 (745)
........+.|.|.++..+|+|.|+|.|.|..+.....+.|.
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 001111235799999999999999999999887655544443
No 310
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.76 E-value=1.5e-17 Score=152.89 Aligned_cols=160 Identities=20% Similarity=0.297 Sum_probs=116.0
Q ss_pred cCceeEeeCCCeEEEEEEEee-cCCCeEEEEeCCEecc---CCCC--------C----Ccee-ecCceEEEccCCCCCCE
Q psy11701 131 EPEFINAAEEETVTFECKASG-LPEPEIHWVHNGKPIS---QAPP--------N----PRRK-VGPNRITIENLRKSDTG 193 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~g~~~~---~~~~--------~----~~~~-~~~~~L~i~~v~~~d~G 193 (745)
.|....+.+|++++|.|.+.+ .+.+.+.|+|+|..+. .... . .+.. ..+++|.|.+++.+|+|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCc
Confidence 466778899999999999975 4556999999987542 1100 0 1222 24678999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecC--CeeeeCCCceEEecCc-eEEEEEEEeec-CCCeEEEeeCCEEccCceEEEeec
Q psy11701 194 NYGCNATNSLGYVYKDVYVNVLAHA--PEITEAPKDEYTVDGK-TVVLTCRVFGA-PKPEVNWIHNQKELTGGRYTILET 269 (745)
Q Consensus 194 ~Y~C~~~~~~g~~~~~~~l~v~~~~--p~~~~~~~~~~v~~g~-~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~~~~~ 269 (745)
.|+|.+.+..+.....+.|.|...+ |.+...+ .....|. .++|.|.+.+. |.+.+.|++++..+.. .
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------~ 154 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS-------Q 154 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------S
T ss_pred eEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------C
Confidence 9999999988877777888887533 3343333 2233465 89999999985 4789999999876532 3
Q ss_pred CcEEEcccCCC-CCEEEEEEEEeCCceEEEE
Q psy11701 270 GDLKITDVAFA-DSGEYTCFARNKLGTAQGS 299 (745)
Q Consensus 270 ~~l~i~~~~~~-d~G~Y~C~~~n~~g~~~~~ 299 (745)
+.|.|.....+ |.|.|+|.|.|..|..+..
T Consensus 155 ~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 155 PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 45677544444 8999999999999887554
No 311
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=3.8e-18 Score=163.71 Aligned_cols=166 Identities=17% Similarity=0.250 Sum_probs=119.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC----CCeeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP----LPQTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVE 95 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p----~~~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~ 95 (745)
+...|....+.+|++|+|.|.+.+.| .+.+.|+|++ ..+ ....|+.... ...+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 45667888999999999999999887 7799999952 211 0124555432 22379999999
Q ss_pred CCCCEEEEEEEEeCCeeeEEEEEEEEEEecC------eEEecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEe
Q psy11701 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP------YFTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKP 165 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p------~~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~ 165 (745)
.+|+|.|+|.+.+..+......+.|.|..++ .+...+....+.+|++++|.|.+.+.| .+.+.|+|+ +..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~ 163 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQG 163 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCC
Confidence 9999999999998755433344667776643 245557778899999999999999876 359999995 322
Q ss_pred cc--------C------CCCCCceeec------CceEEEccCCCCCCEEEEEEEEe
Q psy11701 166 IS--------Q------APPNPRRKVG------PNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 166 ~~--------~------~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
+. . .....++... ...|.|.+++.+|+|.|+|.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 164 LEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred cEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 21 0 0011222221 24799999999999999999984
No 312
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.76 E-value=2.7e-16 Score=142.38 Aligned_cols=235 Identities=17% Similarity=0.281 Sum_probs=165.0
Q ss_pred eEeeccceeEecCCcEEEEEEEee-cC---CCeeEEEECCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGG-TP---LPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g-~p---~~~v~W~~~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
+.+.|....+..|+.++|+|.+.| .| ..+++|+|||.++. .....|.|..++..|+|.|+|.+.+..|
T Consensus 5 Vs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~Is--------GaT~tLti~s~t~sdSG~YqCvVTDa~G 76 (304)
T 3shs_A 5 VSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHE--------NNTATLTVADATSENAGSYKVTVQDTDT 76 (304)
T ss_dssp EEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECS--------CCSSEEEESSCCGGGCEEEEEEEEETTT
T ss_pred EEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCcccc--------CCcceEEeeeccccCCeEEEEEEEECCC
Confidence 456788889999999999999954 46 34899999999876 3345799999999999999999999776
Q ss_pred eeEEEEEEEEEEec--CeEEe-cCceeEeeCCCeEEEEEEE--ee-cC-----CCeEEEEeCCEeccCCCCCCceeecCc
Q psy11701 112 EAKSYSIDLSVLAA--PYFTV-EPEFINAAEEETVTFECKA--SG-LP-----EPEIHWVHNGKPISQAPPNPRRKVGPN 180 (745)
Q Consensus 112 ~~~~~~~~l~V~~~--p~~~~-~~~~~~v~~G~~~~l~C~~--~~-~p-----~~~v~W~~~g~~~~~~~~~~~~~~~~~ 180 (745)
-.... ..+.|... +.+.. .|....+..|+.+.|.+.+ .| .+ ..+++|+||+..+.. ..
T Consensus 77 cs~tS-s~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg----------Aq 145 (304)
T 3shs_A 77 MTSVE-SEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT----------TQ 145 (304)
T ss_dssp CCEEE-CCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES----------SS
T ss_pred Ceeee-eeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC----------cc
Confidence 54422 23333333 23322 3666666778899999988 54 33 469999999987752 23
Q ss_pred eEEEccCCCCCCEEEEEEEEeCCce--EEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEee--------cCCC--
Q psy11701 181 RITIENLRKSDTGNYGCNATNSLGY--VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG--------APKP-- 248 (745)
Q Consensus 181 ~L~i~~v~~~d~G~Y~C~~~~~~g~--~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~--------~p~~-- 248 (745)
.|++...+..++|.|+|.+.+..+. .+.+..|.+.. -+.-........+..|+.+.|...+.. .|..
T Consensus 146 ~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (304)
T 3shs_A 146 DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLAT-MNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTI 224 (304)
T ss_dssp EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECE-EEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEE
T ss_pred ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEc-cccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEE
Confidence 7788888999999999999988764 33344444432 111122234456778999998776532 2222
Q ss_pred eEEEeeC--CEE----c------cCceEEEeecCcEEEcccCCCCCEEEEEEEE
Q psy11701 249 EVNWIHN--QKE----L------TGGRYTILETGDLKITDVAFADSGEYTCFAR 290 (745)
Q Consensus 249 ~i~W~~~--~~~----~------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 290 (745)
.+.|+.. +.. + .-+.+.+..++.|.-.....+|...|.|.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 225 KYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEEEEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHH
Confidence 4678753 221 1 1235677778889999999999999999985
No 313
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.76 E-value=7e-18 Score=159.26 Aligned_cols=173 Identities=18% Similarity=0.295 Sum_probs=120.2
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeec-CCCeEEEEeCC---Ee------------ccCCCCCCceee----cCceEEEc
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGL-PEPEIHWVHNG---KP------------ISQAPPNPRRKV----GPNRITIE 185 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~g---~~------------~~~~~~~~~~~~----~~~~L~i~ 185 (745)
|.+...| ...+.+|++++|.|.+.+. |.+.+.|+|.. .. ........++.. ....|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 3455556 7889999999999999998 88999999931 10 111111123221 23579999
Q ss_pred cCCCCCCEEEEEEEEeCCc-----eEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEee-cCCC-eEEEeeC
Q psy11701 186 NLRKSDTGNYGCNATNSLG-----YVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHN 255 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g-----~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~ 255 (745)
+++.+|+|.|+|.+.+..| .....+.|.|.. .+|.+...+....+..|+.++|.|.+.+ .|.+ .+.|+++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 9999999999999998775 222346677764 3566665555555567899999999988 4666 8999999
Q ss_pred CEEccCce---EEE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEE
Q psy11701 256 QKELTGGR---YTI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGS 299 (745)
Q Consensus 256 ~~~~~~~~---~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 299 (745)
+..+.... ... .....|.|.....+|.|.|+|.|.|..+.....
T Consensus 161 g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 161 GTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp TEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred CEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 98875421 000 112247788888889999999999998765544
No 314
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.76 E-value=3.8e-18 Score=163.60 Aligned_cols=166 Identities=16% Similarity=0.168 Sum_probs=116.6
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Ee---c---------CCCCCeEecc--CCcEEEEccCCCCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VP---I---------NPSDRISQGN--YGKSLIIKHVEFSDQ 99 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~---i---------~~~~~~~~~~--~~~~L~i~~~~~~d~ 99 (745)
+...|..+.+.+|++++|.|.+.+.|.+.+.|+|+. .. + ....|+.... ...+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 456778889999999999999998888899999843 11 1 0134555432 234899999999999
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEEEecCe-------------EEecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPY-------------FTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHN-- 162 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V~~~p~-------------~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~-- 162 (745)
|.|.|.+.+..+......+.|.|..+|. +...+....+.+|++++|.|.+.+.+ .+.+.|+|+
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~ 163 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFP 163 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCC
Confidence 9999999886543333345677766542 33444445689999999999999865 478999994
Q ss_pred CEecc-------CC------CCCCceee------cCceEEEccCCCCCCEEEEEEEEe
Q psy11701 163 GKPIS-------QA------PPNPRRKV------GPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 163 g~~~~-------~~------~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
+..+. .. ....++.. ....|.|.+++.+|+|.|+|.|.|
T Consensus 164 ~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 221 (242)
T 2znx_A 164 GNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXD 221 (242)
T ss_dssp TSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccC
Confidence 32221 00 01222222 124899999999999999999986
No 315
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.76 E-value=3.2e-17 Score=170.22 Aligned_cols=267 Identities=13% Similarity=0.125 Sum_probs=174.4
Q ss_pred CCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEE
Q psy11701 218 APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297 (745)
Q Consensus 218 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 297 (745)
+..+...|....+.+|++++|.|.+. .+.+.|++++..+...+. ....+.|+|.++...|+|.|.|.+.+. ...
T Consensus 203 ~t~i~v~P~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~ri-~~~~~~L~I~nl~~sd~g~y~~~C~~~--~~i 276 (488)
T 2q7n_A 203 NTETNVFPQDKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLIHL-YGQTVAIHILNIPVSENSGTNIIFITD--DDV 276 (488)
T ss_dssp CSSCCEECTTCEEESSCCCEEEECCS---SCEEEEEETTEECCCEEC-SSSCEEEECCSCCCCCSSCEEEEEEES--SCE
T ss_pred CCceEECCCCCEEcCCCCEEEEEECC---CCEEEEEECCEECchhhc-cceEEEEEEeCCCcccCCcEEEEEEcC--CeE
Confidence 45566788888899999999999987 358999999988765431 112346999999999988887776632 223
Q ss_pred EEEEEEEeecceeecCCCcEEEecCCeEEEEEEEEecCC--------CCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEe
Q psy11701 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS--------LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369 (745)
Q Consensus 298 ~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~--------~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~ 369 (745)
..+.+.+..+| ..|.++.+.....-.+.|.+..... ..+.+.+...+.......... .........+.
T Consensus 277 ~~~~l~v~~pP---~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~-~~~~~~~ct~~ 352 (488)
T 2q7n_A 277 YGTVVFAGYPP---DVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEG-LTNETYRLGVQ 352 (488)
T ss_dssp EEEEEEEECCC---CCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSC-CCSSCEEEEEE
T ss_pred EEEEEEeeCCC---CCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccc-cCCceEEEEEc
Confidence 36677776655 4455566544333455555543211 124444433321110000000 00122344454
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEEe----ccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEec
Q psy11701 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445 (745)
Q Consensus 370 ~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~----~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~ 445 (745)
.......+.|+|.|.|..|.... .+.+. .+|.+|.++++.. .+.+++.|+|+++.. .++.+..|+|+|+..
T Consensus 353 l~~~~t~Y~f~V~A~N~~G~~~S--~~~~~~~~~v~P~PP~nl~v~~-~s~~sl~LsW~pP~~--~~g~~l~YeV~Yr~~ 427 (488)
T 2q7n_A 353 MHPGQEIHNFTLTGRNPLGQAQS--AVVINVTERVAPHDPTSLKVKD-INSTVVTFSWYLPGN--FTKINLLCQIEICKA 427 (488)
T ss_dssp CCSSCCCCEEEEEEEETTEEEEE--EEECCGGGTBCCCCCEEEEEEE-CSTTCEEEEEEEEEE--CSSSEEEEEEEEBCT
T ss_pred CCCCccEEEEEEEEEeCCCCccc--eEEEEecCCCCCCCCeEEEEEe-cCCCEEEEEEeCCCC--CCCcceEEEEEEEEC
Confidence 33334778999999999998544 33332 4689999999877 788999999999643 356789999999876
Q ss_pred cCCCCce-eEEEEccCceeEE--EecccccCcceeEEEEEecCCCC---CCCCcceEEeCCCC
Q psy11701 446 KDGEGSI-RELIVNKGESTTT--EVDKFVPASKNFARVLAFNGAYN---GPPSEIISFVTPEG 502 (745)
Q Consensus 446 ~~~~~~~-~~~~~~~~~~~~~--~i~~L~~~~~Y~~~V~a~n~~G~---g~~S~~~~~~t~~~ 502 (745)
+.. .+ ....+.......+ .|.+|.|++.|.|+|+|.| .|. |++|..+.++|.++
T Consensus 428 ~~~--~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 428 NSK--KEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp TSC--CEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred CCC--CceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence 543 22 2233312223455 9999999999999999999 888 57777778877654
No 316
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.76 E-value=3.7e-18 Score=164.94 Aligned_cols=260 Identities=14% Similarity=0.142 Sum_probs=111.3
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecCCC-eEEEEeC--CEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLPEP-EIHWVHN--GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~-~v~W~~~--g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
+.+.|....+.+|+++.|.|.+.- +.+ .+.|.-. +..+.. .......|.|.+++.+ |.|+|.+.....
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~------~g~~~~~~~l~~v~~~--~~y~C~~~~~~~ 72 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLL------PGNNRKVYELSNVQED--SQPMCYSNCPDG 72 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCC------SCSSEEEEEEESCCSC--CCCEEEEECSSC
T ss_pred eEEeCCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCccccc------CCCceEEEEEEecccC--CeEEEEEEcCCc
Confidence 345577788999999999999964 444 4888641 111100 0011125788888854 469999976544
Q ss_pred eEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCC-C--eEEEeeCCEEccCceEEE-eecCcEEEcccCCC
Q psy11701 205 YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK-P--EVNWIHNQKELTGGRYTI-LETGDLKITDVAFA 280 (745)
Q Consensus 205 ~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~-~--~i~W~~~~~~~~~~~~~~-~~~~~l~i~~~~~~ 280 (745)
.....+.|.|...|-.+.+.+....+.+|+.++|.|.+.+..+ . .|+|++++..+....... .....|.+.....+
T Consensus 73 ~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D 152 (291)
T 1mq8_A 73 QSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDH 152 (291)
T ss_dssp EEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSC
T ss_pred cEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeecc
Confidence 5566678888875555555555556888999999999987643 3 589999997765322100 11224666666677
Q ss_pred CCEEEEEEEEeCCce--------EEEEEEEEEeeccee-ecCCCcEEEecCCeEEEEEEEEecCCC-CcEEEEeeCCeec
Q psy11701 281 DSGEYTCFARNKLGT--------AQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSL-KLSIVWLRGSEPI 350 (745)
Q Consensus 281 d~G~Y~C~~~n~~g~--------~~~~~~l~v~~~p~~-~~~p~~~~~~~g~~~~l~C~~~~~~~~-~~~i~W~~~~~~~ 350 (745)
|.+.|+|+|.+..+. .+....|.|..+|.. +.......+..|+.++|.|.+.+.+++ ++.+.|.+++..+
T Consensus 153 ~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l 232 (291)
T 1mq8_A 153 HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL 232 (291)
T ss_dssp SSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------------------------
T ss_pred CCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEec
Confidence 777999999987552 234456777766422 111111256789999999999997554 5689999999887
Q ss_pred cCCCCCeEEEcCCeEEEEecC---CC--CCCEEEEEEEEeCCceEEEEEEEEEecc
Q psy11701 351 DFESEPRFVQSNDYSLTVTKS---SE--LDSGQYTCRAQTELDFIEAQATLTVQVP 401 (745)
Q Consensus 351 ~~~~~~~~~~~~~~~l~i~~~---~~--~~~g~y~c~a~n~~g~~~~~~~l~v~~p 401 (745)
.... . .+...+.+... .. ++.+.|+|.+.+..........|.|..-
T Consensus 233 ~~~~----~-~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~ 283 (291)
T 1mq8_A 233 NPTV----T-YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSF 283 (291)
T ss_dssp --------------------------------------------------------
T ss_pred Ccee----e-ecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcC
Confidence 6311 1 11223333322 23 3456777888875544556666766543
No 317
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=1.4e-18 Score=166.50 Aligned_cols=216 Identities=15% Similarity=0.173 Sum_probs=126.6
Q ss_pred EecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCC--ceeecCceEEEccCCCCCCEEEEEEEE
Q psy11701 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP--RRKVGPNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 123 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
..+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....... ........|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 34677777776 67899999999999975 567999999987553110000 011234689999999999999999998
Q ss_pred eCCc-----eEEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCce-EEEe----e
Q psy11701 201 NSLG-----YVYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR-YTIL----E 268 (745)
Q Consensus 201 ~~~g-----~~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~----~ 268 (745)
+... ..+..+.|.|.. .+|.+...+. ..+.+|++++|.|.+.+.+ +.+.|+|++..+.... .... .
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~ 160 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTF 160 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCC
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCce
Confidence 6431 223345666654 3466665554 4678999999999987754 6899999987654221 1111 1
Q ss_pred cCcEEEcccCCCCCEEEEEEEEeCCc-----eEEEEEEEEEeecceeecC-CCcEEEecCCeEEEEEEEEecCCCCcEEE
Q psy11701 269 TGDLKITDVAFADSGEYTCFARNKLG-----TAQGSGSLTVKEHTHITDQ-PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342 (745)
Q Consensus 269 ~~~l~i~~~~~~d~G~Y~C~~~n~~g-----~~~~~~~l~v~~~p~~~~~-p~~~~~~~g~~~~l~C~~~~~~~~~~~i~ 342 (745)
.+.|.|.+++ |+|.|+|.+.+... ..+..+.|.|..+|....+ |.......|..+.|.|.+...- ..+.
T Consensus 161 ~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~~~~~---~~~~ 235 (257)
T 1b6u_A 161 QADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAAEQKL---ISEE 235 (257)
T ss_dssp BEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-----------------------------------
T ss_pred eEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEEcchH---HHHH
Confidence 4579999998 99999999997532 2345677888887765422 2223446788899998764332 4677
Q ss_pred EeeCC
Q psy11701 343 WLRGS 347 (745)
Q Consensus 343 W~~~~ 347 (745)
|...+
T Consensus 236 ~~~~~ 240 (257)
T 1b6u_A 236 DLNLD 240 (257)
T ss_dssp -----
T ss_pred Hhhhh
Confidence 76543
No 318
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.75 E-value=1.2e-17 Score=157.42 Aligned_cols=171 Identities=17% Similarity=0.230 Sum_probs=120.6
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---cC--------------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---IN--------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i~--------------~~~~~~~~~----~~~~L~ 90 (745)
.+.+|....+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ...|+.+.. ...+|+
T Consensus 3 ~~~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (220)
T 2fbj_H 3 KLLESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQ 82 (220)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEE
T ss_pred eEecCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEE
Confidence 34556778899999999999998765 5689999842 21 10 124666542 234899
Q ss_pred EccCCCCCCEEEEEEEEeCCeee--EEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CC--CeEEEEe
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEA--KSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PE--PEIHWVH 161 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~--~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~--~~v~W~~ 161 (745)
|.+++.+|+|.|.|.+.+..+.. ....+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+. |. +.+.|++
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 99999999999999999864421 22335677764 45555544 3346789999999999885 76 6999999
Q ss_pred CCEeccCCCCCCc-----eeecCceEEEccCCCCCCEEEEEEEEeCCceEE
Q psy11701 162 NGKPISQAPPNPR-----RKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207 (745)
Q Consensus 162 ~g~~~~~~~~~~~-----~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~ 207 (745)
++..+........ .....+.|.|.+...+|+|.|+|.|.|..+...
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 162 SGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 9876521101000 011123589999999999999999999987644
No 319
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.75 E-value=6.4e-18 Score=159.97 Aligned_cols=170 Identities=14% Similarity=0.154 Sum_probs=118.9
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Eec-----------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPI-----------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i-----------------~~~~~~~~~~----~~~~L~ 90 (745)
.+.+|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ....|+.+.. ...+|+
T Consensus 3 ~l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (225)
T 1op3_H 3 QLVESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQ 82 (225)
T ss_dssp EEEEECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred eEEcCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEE
Confidence 34566778899999999999998876 6789999842 211 0134665532 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCe-----e--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eE
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVG-----E--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EI 157 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g-----~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v 157 (745)
|.+++.+|+|.|.|.+.+..| . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 162 (225)
T 1op3_H 83 MHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 162 (225)
T ss_dssp ECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEE
T ss_pred ECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEE
Confidence 999999999999999998754 2 122345777775 3555443322246789999999999885 776 99
Q ss_pred EEEeCCEeccCCCCCCcee------ecCceEEEccCCCCCCEEEEEEEEeCCceEE
Q psy11701 158 HWVHNGKPISQAPPNPRRK------VGPNRITIENLRKSDTGNYGCNATNSLGYVY 207 (745)
Q Consensus 158 ~W~~~g~~~~~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~ 207 (745)
.|++++..+.... ..... ...+.|.|.++..+| |.|+|.|.|..+...
T Consensus 163 ~W~~~~~~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 163 SWNSGALTSGVHT-FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp ECCTTSCCTTCEE-CCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred EEecCCCcCCeEe-cCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 9999987643110 11111 112468999999888 999999999766433
No 320
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.75 E-value=2.7e-17 Score=155.28 Aligned_cols=174 Identities=18% Similarity=0.229 Sum_probs=120.7
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---c--------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---I--------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i--------------~~~~~~~~~~----~~~~L~ 90 (745)
.+..|..+.+.+|++|+|.|.+.+.+ .+.+.|+|+. .. + ....|+.+.. ...+|.
T Consensus 3 ~v~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (223)
T 1dee_B 3 QLVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQ 82 (223)
T ss_dssp EEEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred eEEcCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEE
Confidence 34566788899999999999998765 4689999842 11 1 0124665532 134899
Q ss_pred EccCCCCCCEEEEEEEEeCCe---e--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEE
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVG---E--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHW 159 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g---~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W 159 (745)
|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 162 (223)
T 1dee_B 83 MNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSW 162 (223)
T ss_dssp ECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEE
T ss_pred ECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEe
Confidence 999999999999999987642 1 122335777763 4555433222345789999999999885 776 9999
Q ss_pred Ee-CCEeccCCCCCC-----ceeecCceEEEccCCC--CCCEEEEEEEEeCCceEEEE
Q psy11701 160 VH-NGKPISQAPPNP-----RRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 160 ~~-~g~~~~~~~~~~-----~~~~~~~~L~i~~v~~--~d~G~Y~C~~~~~~g~~~~~ 209 (745)
++ +|..+....... ......+.|.|..... +|.|.|+|.|.|..+.....
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp EETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred EccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 99 988875310000 1111234688888776 88999999999998865544
No 321
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.75 E-value=7e-19 Score=168.22 Aligned_cols=169 Identities=19% Similarity=0.290 Sum_probs=119.7
Q ss_pred ccceeEecCCcEEEEEEEeecC-CC-eeEEEECC--Eec------------CCCCCeEecc--CCcEEEEccCCCCCCEE
Q psy11701 40 RKKEVALRNKKVELFCIFGGTP-LP-QTIWSKDG--VPI------------NPSDRISQGN--YGKSLIIKHVEFSDQGS 101 (745)
Q Consensus 40 ~~~~~v~~G~~~~l~C~~~g~p-~~-~v~W~~~~--~~i------------~~~~~~~~~~--~~~~L~i~~~~~~d~G~ 101 (745)
|....+.+|++++|.|.+.+.+ .+ .+.|+|++ ..+ ....++.... ...+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 7788899999999999998764 34 79999863 222 0124554432 33489999999999999
Q ss_pred EEEEEEeCCee--eEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEeccCCCCCC
Q psy11701 102 YTCEVSNGVGE--AKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPISQAPPNP 173 (745)
Q Consensus 102 Y~C~~~~~~g~--~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~~~~~~~ 173 (745)
|+|.+.+..+. .....+.|.|. .+|.+...+......+|+.++|.|.+.+. |. +.++|+|||..+.......
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99999988762 22234566663 35555554443344579999999999885 44 4899999999886431100
Q ss_pred -------ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy11701 174 -------RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208 (745)
Q Consensus 174 -------~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~ 208 (745)
......+.|.|.++..+|+|.|+|.|.|..+....
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 01112357999999999999999999998765433
No 322
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.75 E-value=1.1e-17 Score=155.34 Aligned_cols=166 Identities=15% Similarity=0.208 Sum_probs=118.8
Q ss_pred EEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCce--eecCceEEEccCCCCCCEEEEEEE
Q psy11701 122 VLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR--KVGPNRITIENLRKSDTGNYGCNA 199 (745)
Q Consensus 122 V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~ 199 (745)
+..+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+......... ......|.|.+++.+|+|.|+|.+
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a 82 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYG 82 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeE
Confidence 345777777776 67899999999999974 77899999998765421100001 123468999999999999999999
Q ss_pred EeCCc-----eEEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCce-EEEe----
Q psy11701 200 TNSLG-----YVYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR-YTIL---- 267 (745)
Q Consensus 200 ~~~~g-----~~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~---- 267 (745)
.+... ..+..+.|.|.. .+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|++++..+.... ....
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~ 160 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGT 160 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTE
T ss_pred ecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCc
Confidence 86531 223345666654 2466666555 46889999999999876 567899999987664321 1111
Q ss_pred ecCcEEEcccCCCCCEEEEEEEEeCC
Q psy11701 268 ETGDLKITDVAFADSGEYTCFARNKL 293 (745)
Q Consensus 268 ~~~~l~i~~~~~~d~G~Y~C~~~n~~ 293 (745)
..+.|.|.+++ |+|.|+|.|.+..
T Consensus 161 ~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 161 FQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEEEEECC--SCEEEEEEEEETT
T ss_pred eEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 14579999998 9999999998753
No 323
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=4.4e-18 Score=159.95 Aligned_cols=169 Identities=21% Similarity=0.367 Sum_probs=121.1
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Eec---------cCCCCCCceee----cCceEEEccCCCCCC
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KPI---------SQAPPNPRRKV----GPNRITIENLRKSDT 192 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~~---------~~~~~~~~~~~----~~~~L~i~~v~~~d~ 192 (745)
+...|....+.+|+++.|.|.+.+.|.+.+.|+|++ ..+ .......++.. ....|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 445577888999999999999999888899999853 211 00111123222 234899999999999
Q ss_pred EEEEEEEEeCCceEEE-EEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEee-cCCC-eEEEeeCCEEccCc-eEEE
Q psy11701 193 GNYGCNATNSLGYVYK-DVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQKELTGG-RYTI 266 (745)
Q Consensus 193 G~Y~C~~~~~~g~~~~-~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~-~~~~ 266 (745)
|.|+|.+.|..+.... ...|.|.. .+|.+...+.......|+.++|.|.+.+ .|.+ .+.|++++..+... ....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 163 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW 163 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecC
Confidence 9999999988765332 24556643 3566665444444457999999999987 5554 89999999887655 2111
Q ss_pred ----------eecCcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 267 ----------LETGDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 267 ----------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
...+.|.|.++..+|.|.|+|.|.|.....
T Consensus 164 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 164 TDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 012379999999999999999999976553
No 324
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.74 E-value=1.5e-17 Score=160.21 Aligned_cols=167 Identities=20% Similarity=0.207 Sum_probs=116.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC-----CCeeEEEECC--Ee---cC---------CCCCeEecc--CCcEEEEccC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP-----LPQTIWSKDG--VP---IN---------PSDRISQGN--YGKSLIIKHV 94 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p-----~~~v~W~~~~--~~---i~---------~~~~~~~~~--~~~~L~i~~~ 94 (745)
+...|..+.+.+|++++|.|.+.+.| .+.+.|+|++ .. +. ...|+.... ...+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 44567888999999999999998887 6799999842 21 10 134555432 2348999999
Q ss_pred CCCCCEEEEEEEEeCCeeeEEEEEEEEEEecC-------------eEEecCceeEeeCCCeEEEEEEEeecC--CCeEEE
Q psy11701 95 EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP-------------YFTVEPEFINAAEEETVTFECKASGLP--EPEIHW 159 (745)
Q Consensus 95 ~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p-------------~~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W 159 (745)
+.+|+|.|+|.+.+..+......+.|.|..++ .....+....+.+|++++|.|.+.+.+ .+.+.|
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEE
Confidence 99999999999988654333334567776542 233344445689999999999998864 569999
Q ss_pred EeCC--Eec------cCC--------CCCCceee------cCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 160 VHNG--KPI------SQA--------PPNPRRKV------GPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 160 ~~~g--~~~------~~~--------~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
+|++ ..+ ... ....++.. ....|.|.+++.+|+|.|+|.+.|.
T Consensus 164 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 164 VKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 9963 211 000 00122222 1248999999999999999999985
No 325
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.74 E-value=8.2e-18 Score=160.47 Aligned_cols=163 Identities=15% Similarity=0.308 Sum_probs=121.7
Q ss_pred ecCceeEeeCCCeEEEEEEEeecCC-CeEEEEeCCEecc----------CCCCCCce-----------eecCceEEEccC
Q psy11701 130 VEPEFINAAEEETVTFECKASGLPE-PEIHWVHNGKPIS----------QAPPNPRR-----------KVGPNRITIENL 187 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p~-~~v~W~~~g~~~~----------~~~~~~~~-----------~~~~~~L~i~~v 187 (745)
..|....+.+|+++.|.|.+.+.+. +.+.|++++.... ......+. ...++.|.|.++
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v 84 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEA 84 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSC
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEccc
Confidence 3477788999999999999999885 8999998654311 00001111 223456999999
Q ss_pred CCCCCEEEEEEEEeCC-ceEEEEEEEEEeecC--CeeeeCCCceEEecCceE-EEEEEE-eecCCCeEEEeeCCEEccCc
Q psy11701 188 RKSDTGNYGCNATNSL-GYVYKDVYVNVLAHA--PEITEAPKDEYTVDGKTV-VLTCRV-FGAPKPEVNWIHNQKELTGG 262 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~-g~~~~~~~l~v~~~~--p~~~~~~~~~~v~~g~~~-~l~C~~-~~~p~~~i~W~~~~~~~~~~ 262 (745)
+.+|+|.|+|.+.+.. +.....+.|.|...+ |.+...+....+.+|+.+ +|.|.+ .+.|.+.+.|++++..+...
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVP 164 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccc
Confidence 9999999999999987 777777888887533 556666666677789988 999999 88999999999999887533
Q ss_pred -----eEEEeec------------CcEEEcccCCCCCEEEEEEEEeC
Q psy11701 263 -----RYTILET------------GDLKITDVAFADSGEYTCFARNK 292 (745)
Q Consensus 263 -----~~~~~~~------------~~l~i~~~~~~d~G~Y~C~~~n~ 292 (745)
++.+... +.|.|.....+|.|.|+|.|.|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 165 VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 2332211 44777766666799999999994
No 326
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.74 E-value=8.6e-18 Score=161.88 Aligned_cols=170 Identities=16% Similarity=0.220 Sum_probs=120.3
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEE----------------CCEecCCC---CCeEecc---CCcEEEEcc
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK----------------DGVPINPS---DRISQGN---YGKSLIIKH 93 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~----------------~~~~i~~~---~~~~~~~---~~~~L~i~~ 93 (745)
+...|..+.+.+|++++|.|.+.+.+.+.+.|+| ++..+... .|+.+.. ...+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4456778899999999999999989999999999 33333222 3444432 234899999
Q ss_pred CCCCCCEEEEEEEEeCCe---eeEEEEEEEEEEe------cCeEEe-cCceeEeeCCCeEEEEEEEeecCCC--eEEEEe
Q psy11701 94 VEFSDQGSYTCEVSNGVG---EAKSYSIDLSVLA------APYFTV-EPEFINAAEEETVTFECKASGLPEP--EIHWVH 161 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~g---~~~~~~~~l~V~~------~p~~~~-~~~~~~v~~G~~~~l~C~~~~~p~~--~v~W~~ 161 (745)
++.+|+|.|+|.+.+..+ ........|.|.. +|.+.. .+....+.+|+.++|.|.+.|.+++ .+.|+|
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 163 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 163 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE
Confidence 999999999999986532 1222335667763 555543 3555556779999999999986554 899999
Q ss_pred CCEeccCCCCCC------------ceeecCceEEEccCCCCC-CEEEEEEEEeCCce
Q psy11701 162 NGKPISQAPPNP------------RRKVGPNRITIENLRKSD-TGNYGCNATNSLGY 205 (745)
Q Consensus 162 ~g~~~~~~~~~~------------~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~g~ 205 (745)
+|..+....... ......+.|.|.....+| +|.|+|.|.|....
T Consensus 164 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 164 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 999886432110 001111348888888888 99999999987543
No 327
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.74 E-value=6.6e-17 Score=161.48 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=142.3
Q ss_pred EEEecCCCCCCEEEEEEEE---eCCceEEEEEEE----EEeccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeE
Q psy11701 366 LTVTKSSELDSGQYTCRAQ---TELDFIEAQATL----TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438 (745)
Q Consensus 366 l~i~~~~~~~~g~y~c~a~---n~~g~~~~~~~l----~v~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y 438 (745)
..+..+.....+.++..|. +..|..+..... ....||.+|.++.+.. .+..++.++|+++... +.+.+|
T Consensus 55 ~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~-~~~~~~~c~W~~~~~~---~~~~~Y 130 (314)
T 3bpo_C 55 RRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIW-HNLSYMKCSWLPGRNT---SPDTNY 130 (314)
T ss_dssp EEEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEE-ETTTEEEEEEECCC------CCCCE
T ss_pred EEEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEE-CCCCeEEEEECCCCCC---CCCccE
Confidence 3445566677777887774 333322222221 2235777889999877 7889999999986432 457899
Q ss_pred EEEEEeccCCCCce-eEEEEccCceeEEEecccc----cCcceeEEEEEecCCCCCCCCcceEEeC-CCCCCCCCCceeE
Q psy11701 439 KVQTWTEKDGEGSI-RELIVNKGESTTTEVDKFV----PASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPGTVQSLEA 512 (745)
Q Consensus 439 ~i~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~----~~~~Y~~~V~a~n~~G~g~~S~~~~~~t-~~~~P~~p~~~~~ 512 (745)
.|.||..+...... ..... ......+.+..+. ..+.|.|+|.|.|..|.+..+. ..+.+ ....|++|.++++
T Consensus 131 ~l~y~~~~~~~~~~C~~~~~-~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~-~~~~~~~~v~P~pP~~l~~ 208 (314)
T 3bpo_C 131 TLYYWHRSLEKIHQCENIFR-EGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSF-NIVPLTSRVKPDPPHIKNL 208 (314)
T ss_dssp EEEEEESSCSSCEECCCEEE-ETTEEEEEEECCC--------CCEEEEEEETTSCSCCEE-EEECSSSSEECCCCEEEEE
T ss_pred EEEEEeCCCCccccCcCeec-CCCeEEEEECCCCccccceeEEEEEEEEEcCCCceeccc-EEEehhheEeeCCCCEEEE
Confidence 99998764321111 01112 2344667776665 3789999999999999886553 44543 3356999999998
Q ss_pred EEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccc-------ccccccCCCcceeeecCCCCCccEEEEEEEE
Q psy11701 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE-------RLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585 (745)
Q Consensus 513 ~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~ 585 (745)
. ...+++.|+|++|...++.+.+|.|+|+..+...|..... ..........+.+.|.+|.|++.|.|+|+|.
T Consensus 209 ~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~ 287 (314)
T 3bpo_C 209 S-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVK 287 (314)
T ss_dssp E-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEE
T ss_pred E-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEee
Confidence 7 6778999999999765556899999999876554422110 0000002356789999999999999999999
Q ss_pred ecC----CCCCCcceee
Q psy11701 586 TKA----GDGAESKYLF 598 (745)
Q Consensus 586 n~~----G~g~~S~~~~ 598 (745)
+.. +.|.+|+++.
T Consensus 288 ~~~~~~~~~g~WS~WS~ 304 (314)
T 3bpo_C 288 TNKLCYEDDKLWSNWSQ 304 (314)
T ss_dssp ECTTTSCCCCCCCCCCC
T ss_pred ecccccCCCCeeCCCCC
Confidence 862 3455555543
No 328
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.74 E-value=1.8e-17 Score=158.82 Aligned_cols=165 Identities=22% Similarity=0.295 Sum_probs=117.7
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEecc------------CCCCCCceee-----cCceEEEccCC
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPIS------------QAPPNPRRKV-----GPNRITIENLR 188 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~------------~~~~~~~~~~-----~~~~L~i~~v~ 188 (745)
+...|....+.+|++++|.|. .+.|.+.+.|+|+ +..+. ......++.. ....|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 455678888999999999999 7778899999995 21110 0011122222 23579999999
Q ss_pred CCCCEEEEEEEEeCCceE-----EEEEEEEEeecCC-----------eeeeCCCceEEecCceEEEEEEEeecCCCeEEE
Q psy11701 189 KSDTGNYGCNATNSLGYV-----YKDVYVNVLAHAP-----------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~~-----~~~~~l~v~~~~p-----------~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W 252 (745)
.+|+|.|+|.+.|..|.. .....|.|...++ .+...|....+.+|++++|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 999999999999875521 1234666665443 566667778899999999999999998899999
Q ss_pred eeCCE-----Ec----------cCceEEEee-----cCcEEEcccCCCCCEEEEEEEEeCC
Q psy11701 253 IHNQK-----EL----------TGGRYTILE-----TGDLKITDVAFADSGEYTCFARNKL 293 (745)
Q Consensus 253 ~~~~~-----~~----------~~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~~~n~~ 293 (745)
++++. .+ ...++.... ...|.|.+++.+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99631 11 123444432 2479999999999999999999874
No 329
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.74 E-value=1.3e-17 Score=156.68 Aligned_cols=165 Identities=23% Similarity=0.289 Sum_probs=119.6
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Ee---ccC------CCCCCceee----cCceEEEccCCCC
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KP---ISQ------APPNPRRKV----GPNRITIENLRKS 190 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~---~~~------~~~~~~~~~----~~~~L~i~~v~~~ 190 (745)
|.+...|....+.+|++++|.|.+.+.|.+.+.|+|++ .. +.. .....++.. ....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 44566688889999999999999999888999999842 11 100 001122222 2347999999999
Q ss_pred CCEEEEEEEEeCCce---EEEEEEEEEe--ecCCeeeeCCCceEEecCceEEEEEEEee-cCCCeEEEeeCCEEccCce-
Q psy11701 191 DTGNYGCNATNSLGY---VYKDVYVNVL--AHAPEITEAPKDEYTVDGKTVVLTCRVFG-APKPEVNWIHNQKELTGGR- 263 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~---~~~~~~l~v~--~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~- 263 (745)
|+|.|+|.+.|..+. ......+.|. ..+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|++++..+..+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~ 161 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIE 161 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCee
Confidence 999999999987662 2233445543 34566665555555667999999999998 7888999999998876432
Q ss_pred EE----------EeecCcEEEcccCCCCCEEEEEEEE
Q psy11701 264 YT----------ILETGDLKITDVAFADSGEYTCFAR 290 (745)
Q Consensus 264 ~~----------~~~~~~l~i~~~~~~d~G~Y~C~~~ 290 (745)
.. ....+.|.|..+..+|.|.|+|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 162 NSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 11 1112458899999999999999998
No 330
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.74 E-value=1.4e-17 Score=161.71 Aligned_cols=170 Identities=18% Similarity=0.205 Sum_probs=119.4
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecC------CCeeEEEEC--CEecC------------CCCCeEecc--CCcEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTP------LPQTIWSKD--GVPIN------------PSDRISQGN--YGKSLI 90 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p------~~~v~W~~~--~~~i~------------~~~~~~~~~--~~~~L~ 90 (745)
...+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.... ...+|+
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 34556678889999999999999998877 678999984 32211 135655432 234899
Q ss_pred EccCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecC------------------eE-EecCceeEeeCCCeEEEEEEEee
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP------------------YF-TVEPEFINAAEEETVTFECKASG 151 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p------------------~~-~~~~~~~~v~~G~~~~l~C~~~~ 151 (745)
|.+++.+|+|.|.|.+.+..+......+.|.|..+| .+ ...+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 999999999999999987654333334567777653 22 22334457899999999999988
Q ss_pred cCC--CeEEEEeCC--Ee---cc---CCC--------CCCceee------cCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 152 LPE--PEIHWVHNG--KP---IS---QAP--------PNPRRKV------GPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 152 ~p~--~~v~W~~~g--~~---~~---~~~--------~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.+. +.+.|+|+. .. +. ... ...+... ....|.|.+++.+|+|.|+|.+.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 664 799999963 21 11 000 0112221 2358999999999999999999985
No 331
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.74 E-value=1.8e-17 Score=163.49 Aligned_cols=169 Identities=15% Similarity=0.171 Sum_probs=118.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--EecC-----------------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPIN-----------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i~-----------------~~~~~~~~~----~~~~L~ 90 (745)
++..|....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. ...|+.+.. ...+|+
T Consensus 25 ~v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 104 (291)
T 2gki_A 25 QLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYME 104 (291)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEE
T ss_pred EEEcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEE
Confidence 44567788999999999999998776 5789999952 2110 023443321 235899
Q ss_pred EccCCCCCCEEEEEEEEeCC-e---eeEEEEEEEEEEe----------------cCeEEecCceeEeeCCCeEEEEEEEe
Q psy11701 91 IKHVEFSDQGSYTCEVSNGV-G---EAKSYSIDLSVLA----------------APYFTVEPEFINAAEEETVTFECKAS 150 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~-g---~~~~~~~~l~V~~----------------~p~~~~~~~~~~v~~G~~~~l~C~~~ 150 (745)
|.+++.+|+|.|+|.+.+.. | ......+.|.|.. ++.+...|....+.+|++++|.|.+.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 184 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSS 184 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEES
T ss_pred ECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcC
Confidence 99999999999999998764 1 1111234677765 34455567778899999999999998
Q ss_pred ecCCC------eEEEEeCC--Eec---cCC------CCCCceee----cCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 151 GLPEP------EIHWVHNG--KPI---SQA------PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 151 ~~p~~------~v~W~~~g--~~~---~~~------~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
+.+.+ .+.|+|++ ..+ ... ....++.. ....|.|.+++.+|+|.|+|.+.+...
T Consensus 185 ~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 259 (291)
T 2gki_A 185 QSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHM 259 (291)
T ss_dssp SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCc
Confidence 87765 89999962 211 100 01122221 234799999999999999999998653
No 332
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.73 E-value=2.8e-18 Score=162.84 Aligned_cols=174 Identities=13% Similarity=0.219 Sum_probs=118.9
Q ss_pred cccCCCCCeeEeeccceeEecCCcEEEEEEEeec-CC-C-eeEEEECCEec-CCCCCeE-eccCC-----cEEEEccCCC
Q psy11701 27 SQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT-PL-P-QTIWSKDGVPI-NPSDRIS-QGNYG-----KSLIIKHVEF 96 (745)
Q Consensus 27 ~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-~-~v~W~~~~~~i-~~~~~~~-~~~~~-----~~L~i~~~~~ 96 (745)
+....+|..++..|....+.+|++++|.|.+.|. |. + .|.|+++|+.+ ....... ....+ ..|.|.+++.
T Consensus 7 ~~~~~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~ 86 (231)
T 2w59_A 7 AQSCSPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDW 86 (231)
T ss_dssp -----CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHH
T ss_pred CCCCCCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhc
Confidence 3445567777788888888999999999999885 64 4 99999999887 4322222 11222 3699999999
Q ss_pred CCCEEEEEEEEeCCeeeEEEEEEEEEE------ecCeEEecC-ceeEeeCCCeEEEEEEEeec-C-CCeEEEEeCCEecc
Q psy11701 97 SDQGSYTCEVSNGVGEAKSYSIDLSVL------AAPYFTVEP-EFINAAEEETVTFECKASGL-P-EPEIHWVHNGKPIS 167 (745)
Q Consensus 97 ~d~G~Y~C~~~~~~g~~~~~~~~l~V~------~~p~~~~~~-~~~~v~~G~~~~l~C~~~~~-p-~~~v~W~~~g~~~~ 167 (745)
+|.|.|+|.+.+..+... +.+.|. .+|.+.+.+ .... ..|+.++|.|.+.|. | .+.|+|+|||+.+.
T Consensus 87 ~D~g~Y~C~~~~~~~~~~---~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 162 (231)
T 2w59_A 87 LSGERFTCTVQHEELPLP---LSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVP 162 (231)
T ss_dssp HTTCCEEEEEECTTCSSC---EEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred cCCCEEEEEEEcCCCCCc---eEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECC
Confidence 999999999998765422 233332 456554433 2222 345689999999984 4 36999999999986
Q ss_pred CCCCC-C-cee---------------ecCceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 168 QAPPN-P-RRK---------------VGPNRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 168 ~~~~~-~-~~~---------------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
..... . ... ...+.|.|.....+|.|.|+|.|.|...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 163 ATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp GGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 43210 0 011 1124578888888889999999998764
No 333
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.73 E-value=1.3e-17 Score=158.30 Aligned_cols=172 Identities=17% Similarity=0.257 Sum_probs=117.2
Q ss_pred EeeccceeEecCCcEEEEEEEeecCC----CeeEEEEC--CEecC----------------CCCCeEecc----CCcEEE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPL----PQTIWSKD--GVPIN----------------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~----~~v~W~~~--~~~i~----------------~~~~~~~~~----~~~~L~ 90 (745)
+..|....+.+|++++|.|.+.+.|. +.+.|+|+ +..+. ...|+.+.. ...+|.
T Consensus 4 v~qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (228)
T 3bae_H 4 LKESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMK 83 (228)
T ss_dssp EEEECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEE
T ss_pred EeCCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEE
Confidence 45577788999999999999998764 79999984 22210 123555432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCe------e--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-e
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVG------E--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-E 156 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g------~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~ 156 (745)
|.+++.+|+|.|.|.+.+..| . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~ 163 (228)
T 3bae_H 84 ITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 163 (228)
T ss_dssp ECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCE
T ss_pred EcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEE
Confidence 999999999999999988653 2 111236777763 5666554434456789999999999885 777 9
Q ss_pred EEEEeCCEeccCCCCCC----ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 157 IHWVHNGKPISQAPPNP----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 157 v~W~~~g~~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~ 209 (745)
+.|++++..+....... ......+.|.|.++..+| |.|+|.|.|..+.....
T Consensus 164 v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 164 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp EEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 99999987542110000 011123468999988866 99999999998865543
No 334
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.73 E-value=3.7e-17 Score=159.39 Aligned_cols=169 Identities=20% Similarity=0.184 Sum_probs=115.5
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecC-----CCeeEEEECC--Eec---C---------CCCCeEecc--CCcEEEEc
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTP-----LPQTIWSKDG--VPI---N---------PSDRISQGN--YGKSLIIK 92 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~~~v~W~~~~--~~i---~---------~~~~~~~~~--~~~~L~i~ 92 (745)
..+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ . ...|+.... ...+|+|.
T Consensus 16 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 95 (268)
T 1x9q_A 16 VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKIN 95 (268)
T ss_dssp CCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred ceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEEC
Confidence 4456678889999999999999998876 4799999852 211 0 134555432 23489999
Q ss_pred cCCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCe-----------------------EEecCceeEeeCCCeEEEEEEE
Q psy11701 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPY-----------------------FTVEPEFINAAEEETVTFECKA 149 (745)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~-----------------------~~~~~~~~~v~~G~~~~l~C~~ 149 (745)
+++.+|+|.|+|.+.+..+........|.|..++. ....+....+.+|++++|.|.+
T Consensus 96 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~ 175 (268)
T 1x9q_A 96 RVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVT 175 (268)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEE
T ss_pred CCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEe
Confidence 99999999999999876443222334566654321 2334556788999999999999
Q ss_pred eecCC--CeEEEEeC--CEecc----------------CCCCCCceeec------CceEEEccCCCCCCEEEEEEEEeC
Q psy11701 150 SGLPE--PEIHWVHN--GKPIS----------------QAPPNPRRKVG------PNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 150 ~~~p~--~~v~W~~~--g~~~~----------------~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.+.+. +.+.|+|+ +..+. ......++... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 176 ~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 176 SGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp ESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 88653 78999985 22210 00112233221 257999999999999999999874
No 335
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.73 E-value=7.5e-18 Score=156.17 Aligned_cols=153 Identities=24% Similarity=0.435 Sum_probs=108.5
Q ss_pred eeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy11701 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216 (745)
Q Consensus 137 v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~ 216 (745)
+.+|++++|.|.+ |.+.+.|+|+|..+... ...++.|.|.+++.+|+|.|+|.+.+.... .+.|.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~---~~~v~v~~ 82 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSK---PLQVYYRM 82 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE------ESSCCCEEEEEGGGCCEEEEEEESSSSCCC---CEEEEEEC
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC------CCCCCeEEeCCCCcCCCEEEEEEecCCCCe---eEEEEEEE
Confidence 3689999999998 77899999999988632 123568999999999999999997553221 13333320
Q ss_pred ------------------------------cCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc---e
Q psy11701 217 ------------------------------HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---R 263 (745)
Q Consensus 217 ------------------------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~---~ 263 (745)
.++.+...| .....+|++++|.|. +.|.+.+.|++++..+... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~ 159 (204)
T 1sy6_A 83 GSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDK 159 (204)
T ss_dssp ------------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCT
T ss_pred eccccccccccccccccccccccccccccccccceecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCc
Confidence 012222222 222338999999999 7788899999999887532 2
Q ss_pred EEEeecCcEEEccc-CCCCCEEEEEEEEeCCceE-EEEEEEEE
Q psy11701 264 YTILETGDLKITDV-AFADSGEYTCFARNKLGTA-QGSGSLTV 304 (745)
Q Consensus 264 ~~~~~~~~l~i~~~-~~~d~G~Y~C~~~n~~g~~-~~~~~l~v 304 (745)
......+.|.|.++ +.+|+|.|+|.|.|..|.. +....|.+
T Consensus 160 ~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 160 NIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp TEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred eEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 22234778999999 9999999999999998862 34444443
No 336
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.73 E-value=2.2e-17 Score=159.26 Aligned_cols=172 Identities=16% Similarity=0.225 Sum_probs=116.4
Q ss_pred cCceeEeeCCCeEEEEEEEeecCCCe-----EEEEeCCEeccCC--------------CCCCce-----eecCceEEEcc
Q psy11701 131 EPEFINAAEEETVTFECKASGLPEPE-----IHWVHNGKPISQA--------------PPNPRR-----KVGPNRITIEN 186 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p~~~-----v~W~~~g~~~~~~--------------~~~~~~-----~~~~~~L~i~~ 186 (745)
.|....+.+|++++|.|.+.+.|.+. +.|+|++...... ....+. ...+.+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 35566889999999999999877765 9999964321100 000000 11244699999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEee-cCCC-eEEEeeCCEEccCc--
Q psy11701 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQKELTGG-- 262 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~-- 262 (745)
++.+|+|.|+|.+.+..+.....+.|.|.. +|.+...+.. .+..|+.++|.|.+.+ .|.+ .+.|++++..+...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~-~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~ 166 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVA-SPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIE 166 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEB-CCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEec-CCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccc
Confidence 999999999999999988877888888875 7777666553 3456788889999998 7888 99999988543211
Q ss_pred --------eEEEee------cCcEEEcccCCCCCEEEEEEEEeCCce--EEEEEEEEE
Q psy11701 263 --------RYTILE------TGDLKITDVAFADSGEYTCFARNKLGT--AQGSGSLTV 304 (745)
Q Consensus 263 --------~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v 304 (745)
...... ...|.|.....+|.|.|+|.|.|..+. ....+.|.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 167 ISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp ECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 111111 235788888889999999999998876 455666666
No 337
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.73 E-value=2e-16 Score=162.69 Aligned_cols=193 Identities=14% Similarity=0.119 Sum_probs=130.3
Q ss_pred CCCCCCceeEEEcCCceEEEEeeCCCCCC--C-ceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEE
Q psy11701 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQPN--G-VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579 (745)
Q Consensus 503 ~P~~p~~~~~~~~~~~~i~l~W~~p~~~~--g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 579 (745)
+|++|.++.+.....++++++|+++.+.+ | ..+.|.|.|+..+... .... .....+....+.+.+|.+.+.|.
T Consensus 281 PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~~~--~C~~--~~~~~~~~~~C~~~~l~~~t~Y~ 356 (483)
T 3e0g_A 281 PPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYV--RLKR--AEAPTNESYQLLFQMLPNQEIYN 356 (483)
T ss_dssp CCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCCEE--EECC--CSSCSCSCEEEEEECCTTCCCEE
T ss_pred CCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCCCc--cccC--CcccCCCEEEEEEccCCCCcEEE
Confidence 57889999998888889999999987653 4 3899999997543221 1110 00001234578899999999999
Q ss_pred EEEEEEecCCCCCCcceeeeccc----CCCCCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCc
Q psy11701 580 IHLAGYTKAGDGAESKYLFYVPF----KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655 (745)
Q Consensus 580 ~~V~a~n~~G~g~~S~~~~~~~~----~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~ 655 (745)
|+|.|.|..|.+... ....... .+|..+.+....++.+.|+|++|. ..++.+..|.|+|++.+...++....+
T Consensus 357 f~V~A~N~lG~~~S~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~--~~~~~~L~YeVrYr~~~~~~~~~~vsv 433 (483)
T 3e0g_A 357 FTLNAHNPLGRSQST-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPG--NFAKINFLCEIEIKKSNSVQEQRNVTI 433 (483)
T ss_dssp EEEEEECSSCEEEEE-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCS--CCTTSBCCCEEEEECSSSCCCEEECCC
T ss_pred EEEEEEeCCCCcccc-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCC--CCCCceEEEEEEEEECCCCCceEEEEE
Confidence 999999999988743 2221111 122223333446788999999775 345677899999987633211100000
Q ss_pred cccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCccc---CCCCc
Q psy11701 656 LDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN---GPPSE 732 (745)
Q Consensus 656 ~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~---g~~s~ 732 (745)
.+ ......++.|.+|.|++.|.|+|+|. ..|. |+||+
T Consensus 434 ----------~~-----------------------------~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~ 473 (483)
T 3e0g_A 434 ----------QG-----------------------------VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSN 473 (483)
T ss_dssp ----------BC-----------------------------CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCC
T ss_pred ----------ec-----------------------------cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCC
Confidence 00 00123357889999999999999999 6776 88999
Q ss_pred ceEEeCCCCC
Q psy11701 733 IISFVTPEGG 742 (745)
Q Consensus 733 ~~~~~t~~~~ 742 (745)
++.|+|+|+.
T Consensus 474 ~~~f~T~E~~ 483 (483)
T 3e0g_A 474 KKQHLTTEAS 483 (483)
T ss_dssp CCCCCCCCCC
T ss_pred ceeeECCCCC
Confidence 9999998863
No 338
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.73 E-value=9.7e-18 Score=157.12 Aligned_cols=164 Identities=20% Similarity=0.337 Sum_probs=117.5
Q ss_pred CceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEecc---------CCCCCCceee----cCceEEEccCCCCCCEEEE
Q psy11701 132 PEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPIS---------QAPPNPRRKV----GPNRITIENLRKSDTGNYG 196 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~---------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~ 196 (745)
|....+.+|++++|.|.+.+.|.+.+.|+|+ |..+. ......++.. ....|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 7888899999999999999988889999984 22210 0011123322 2348999999999999999
Q ss_pred EEEEeCCceEEE-EEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCEEccCc-eEEE----
Q psy11701 197 CNATNSLGYVYK-DVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKELTGG-RYTI---- 266 (745)
Q Consensus 197 C~~~~~~g~~~~-~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~-~~~~---- 266 (745)
|.+.|..+.... ...|.|.. .+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..+... ....
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 999987764332 23556643 35666654444444579999999999874 443 89999999987655 1111
Q ss_pred eec------CcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 267 LET------GDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 267 ~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
..+ ..|.|.++..+|+|.|+|.|.|....
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 111 25899999999999999999997653
No 339
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.73 E-value=3e-17 Score=159.08 Aligned_cols=166 Identities=20% Similarity=0.281 Sum_probs=112.9
Q ss_pred eeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--EecC------------CCCCeEeccC--CcEEEEccCCCCCC
Q psy11701 38 VTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VPIN------------PSDRISQGNY--GKSLIIKHVEFSDQ 99 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~i~------------~~~~~~~~~~--~~~L~i~~~~~~d~ 99 (745)
..|....+.+|++++|.|.+.+. +.+.+.|+|++ ..+. ...|+..... ..+|.|.+++.+|+
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDE 86 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhC
Confidence 44556789999999999999877 77899999842 1110 1245554322 23799999999999
Q ss_pred EEEEEEEEeCCee--eEEEEEEEEEEecCe--------------------EEecCceeEeeCCCeEEEEEEEeecC--CC
Q psy11701 100 GSYTCEVSNGVGE--AKSYSIDLSVLAAPY--------------------FTVEPEFINAAEEETVTFECKASGLP--EP 155 (745)
Q Consensus 100 G~Y~C~~~~~~g~--~~~~~~~l~V~~~p~--------------------~~~~~~~~~v~~G~~~~l~C~~~~~p--~~ 155 (745)
|.|+|.+.+..+. .....+.|.|..++. ....+....+.+|++++|.|.+.+.+ .+
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 166 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSY 166 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCccccc
Confidence 9999999986432 222345677766541 22333445689999999999998866 67
Q ss_pred eEEEEeC--CEecc------CC--------CCCCceee------cCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 156 EIHWVHN--GKPIS------QA--------PPNPRRKV------GPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 156 ~v~W~~~--g~~~~------~~--------~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
.+.|+|+ +..+. .. ....++.. ....|.|.+++.+|+|.|+|.+.|..
T Consensus 167 ~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 167 AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9999996 32221 00 01112221 12359999999999999999999864
No 340
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.73 E-value=1.1e-16 Score=151.90 Aligned_cols=174 Identities=16% Similarity=0.199 Sum_probs=119.3
Q ss_pred CceeEeeCCCeEEEEEEEeecCCC---eEEEEeCCEeccC-------------CCCC-----------CceeecCceEEE
Q psy11701 132 PEFINAAEEETVTFECKASGLPEP---EIHWVHNGKPISQ-------------APPN-----------PRRKVGPNRITI 184 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p~~---~v~W~~~g~~~~~-------------~~~~-----------~~~~~~~~~L~i 184 (745)
|....+..|++++|.|.+.+.+.+ .++|+|++..+.. .... ......+.+|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 445678899999999999886665 4899997644310 0000 011123467999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEccCce
Q psy11701 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGR 263 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~ 263 (745)
.+++.+|+|.|+|.+.+..+.........+...+|.+...+.......++.+.+.|.+ .+.|.+.+.|++++..+....
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~ 167 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT 167 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCc
Confidence 9999999999999999887765555443444446666655556666677777777775 456788999999876543222
Q ss_pred EE-Eeec------CcEEEcccCCCCCEEEEEEEEeCCceE--EEEEEEEEe
Q psy11701 264 YT-ILET------GDLKITDVAFADSGEYTCFARNKLGTA--QGSGSLTVK 305 (745)
Q Consensus 264 ~~-~~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~l~v~ 305 (745)
.. ...+ +.|.|.++..+|+|.|+|.|.|..+.. ...+.|.|.
T Consensus 168 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 168 QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 11 1122 259999999999999999999987764 344444443
No 341
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.72 E-value=4.3e-17 Score=156.80 Aligned_cols=170 Identities=21% Similarity=0.272 Sum_probs=118.2
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEec--------------CCCCCeEecc---CCcEEEEccCCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPI--------------NPSDRISQGN---YGKSLIIKHVEF 96 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i--------------~~~~~~~~~~---~~~~L~i~~~~~ 96 (745)
+...|..+.+.+|++++|.|.+.+.+.+.+.|+|. +..+ ....|+.+.. ...+|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 45667888999999999999999889999999982 2110 0123444322 234799999999
Q ss_pred CCCEEEEEEEEeCC-----eeeEEEEEEEEEEe------cCeEEec-CceeEeeCCCeEEEEEEEeec-CCC-eEEEEeC
Q psy11701 97 SDQGSYTCEVSNGV-----GEAKSYSIDLSVLA------APYFTVE-PEFINAAEEETVTFECKASGL-PEP-EIHWVHN 162 (745)
Q Consensus 97 ~d~G~Y~C~~~~~~-----g~~~~~~~~l~V~~------~p~~~~~-~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~ 162 (745)
+|+|.|+|.+.+.. .........|.|.. +|.+... +....+.+|+.++|.|.+.|. |.+ .+.|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 99999999999822 22222335677765 5655433 444445669999999999884 444 7999999
Q ss_pred CEeccCCCCC------------CceeecCceEEEccCCCCC-CEEEEEEEEeCCce
Q psy11701 163 GKPISQAPPN------------PRRKVGPNRITIENLRKSD-TGNYGCNATNSLGY 205 (745)
Q Consensus 163 g~~~~~~~~~------------~~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~g~ 205 (745)
|..+...... .......+.|.|.....+| .|.|+|.|.|....
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 9988643211 0111112468888888888 67999999987543
No 342
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=2.4e-17 Score=159.57 Aligned_cols=177 Identities=20% Similarity=0.312 Sum_probs=121.4
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEecc-------------CCCCCCceee------cCceEEEccCC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKPIS-------------QAPPNPRRKV------GPNRITIENLR 188 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~~~-------------~~~~~~~~~~------~~~~L~i~~v~ 188 (745)
|....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ......++.. ....|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 4455789999999999999875 679999985 22110 0001223332 12489999999
Q ss_pred CCCCEEEEEEEEeCCc-------eEE--EEEEEEEeecC--------------CeeeeCCCceEEecCceEEEEEEEeec
Q psy11701 189 KSDTGNYGCNATNSLG-------YVY--KDVYVNVLAHA--------------PEITEAPKDEYTVDGKTVVLTCRVFGA 245 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g-------~~~--~~~~l~v~~~~--------------p~~~~~~~~~~v~~g~~~~l~C~~~~~ 245 (745)
.+|+|.|+|.+.|..| ... ....|.|...+ +.+...+....+.+|++++|.|.+.+.
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 166 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQN 166 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSC
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCc
Confidence 9999999999998853 111 23567776432 234445666778899999999999988
Q ss_pred CCCeEEEee--CCEEcc-------------CceEEEee---cCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy11701 246 PKPEVNWIH--NQKELT-------------GGRYTILE---TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307 (745)
Q Consensus 246 p~~~i~W~~--~~~~~~-------------~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~ 307 (745)
+.+.+.|++ ++..+. ..++.... ...|.|.+++.+|+|.|.|.|.|..........|.|...
T Consensus 167 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp CBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSS
T ss_pred CCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCC
Confidence 888999999 444321 23444322 236999999999999999999986512223345655544
Q ss_pred c
Q psy11701 308 T 308 (745)
Q Consensus 308 p 308 (745)
+
T Consensus 247 ~ 247 (257)
T 1f3r_B 247 E 247 (257)
T ss_dssp C
T ss_pred C
Confidence 3
No 343
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.72 E-value=1.4e-17 Score=157.72 Aligned_cols=176 Identities=24% Similarity=0.398 Sum_probs=120.7
Q ss_pred eeEeeCCCeEEEEEEEeecCC-----CeEEEEeCCEeccC----------CCCCCceee-------cCceEEEccCCCCC
Q psy11701 134 FINAAEEETVTFECKASGLPE-----PEIHWVHNGKPISQ----------APPNPRRKV-------GPNRITIENLRKSD 191 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~~~~~p~-----~~v~W~~~g~~~~~----------~~~~~~~~~-------~~~~L~i~~v~~~d 191 (745)
...+.+|++++|.|.+.+.+. +.+.|++++..... .....+... ++..|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456789999999999987654 68999998743310 011122222 25689999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeec--CCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeC-CEEccCce-EEE
Q psy11701 192 TGNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHN-QKELTGGR-YTI 266 (745)
Q Consensus 192 ~G~Y~C~~~~~~g~~~~~~~l~v~~~--~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~-~~~~~~~~-~~~ 266 (745)
+|.|+|.+.+. +.....+.|.|... +|.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|+++ +..+.... ...
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 99999999986 33344455555532 34555444 3467789999999999 7889999999994 44443321 111
Q ss_pred --eecCc---EEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecceee
Q psy11701 267 --LETGD---LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311 (745)
Q Consensus 267 --~~~~~---l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~~~ 311 (745)
..++. |.|.++..+|.|.|+|.|.|..|.....+.|.|..+|...
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 211 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTF 211 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-----
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcccc
Confidence 12222 7899999999999999999999999999999998877543
No 344
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.72 E-value=4.7e-18 Score=161.61 Aligned_cols=174 Identities=15% Similarity=0.208 Sum_probs=117.0
Q ss_pred CCCCeeEeecccee-EecCCcEEEEEEEeec---CCC-eeEEEECCEecCCCC---CeEecc----CCcEEEEccCCCCC
Q psy11701 31 HAPKQQYVTRKKEV-ALRNKKVELFCIFGGT---PLP-QTIWSKDGVPINPSD---RISQGN----YGKSLIIKHVEFSD 98 (745)
Q Consensus 31 ~~p~~~~~~~~~~~-v~~G~~~~l~C~~~g~---p~~-~v~W~~~~~~i~~~~---~~~~~~----~~~~L~i~~~~~~d 98 (745)
.+|..++.++.... +.+|++++|.|.+.|. |.+ .|.|+|++..+.... ...+.. ....|.|.+++.+|
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D 93 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLN 93 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHT
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccC
Confidence 56676666565555 8899999999999887 766 999999887664321 011111 12379999999999
Q ss_pred CEEEEEEEEeCCeee-EEEEEEE--EEEecCeEEecCceeEeeCCCeEEEEEEEee-cCC-CeEEEEeCCEeccCCCCCC
Q psy11701 99 QGSYTCEVSNGVGEA-KSYSIDL--SVLAAPYFTVEPEFINAAEEETVTFECKASG-LPE-PEIHWVHNGKPISQAPPNP 173 (745)
Q Consensus 99 ~G~Y~C~~~~~~g~~-~~~~~~l--~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~-~~v~W~~~g~~~~~~~~~~ 173 (745)
+|.|+|.+.+..+.. ....+.+ .+..+|.+.+.+.......|+.++|.|.+.| .|. ..++|+|||+.+.......
T Consensus 94 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 173 (239)
T 1i1c_A 94 GKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTP 173 (239)
T ss_dssp TCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECC
T ss_pred CCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecC
Confidence 999999999877643 2233333 4556777766655433346899999999998 455 4899999999886422111
Q ss_pred ceeecCce------EEEccCCCCCCEEEEEEEEeCCc
Q psy11701 174 RRKVGPNR------ITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 174 ~~~~~~~~------L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
.....+++ |.|.....+|.|.|+|.|.|...
T Consensus 174 ~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 174 PTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 11223333 44444444579999999998764
No 345
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.72 E-value=6.8e-17 Score=153.46 Aligned_cols=179 Identities=18% Similarity=0.230 Sum_probs=117.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---c-------------CCCCCeEecc----CCcEEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---I-------------NPSDRISQGN----YGKSLII 91 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i-------------~~~~~~~~~~----~~~~L~i 91 (745)
.+.+|....+.+|++++|.|.+.+.+ .+.+.|+|.. .. + ....|+.+.. ...+|+|
T Consensus 3 ~l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (232)
T 1dn0_B 3 QLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKL 82 (232)
T ss_dssp EEEEECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred eEECCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEE
Confidence 34566778899999999999998765 5689999842 21 1 0135665532 1238999
Q ss_pred ccCCCCCCEEEEEEEEe--CCee---eEEEEEEEEEEe----cCeEEecCceeEeeCC-CeEEEEEEEeec-CCC-eEEE
Q psy11701 92 KHVEFSDQGSYTCEVSN--GVGE---AKSYSIDLSVLA----APYFTVEPEFINAAEE-ETVTFECKASGL-PEP-EIHW 159 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~--~~g~---~~~~~~~l~V~~----~p~~~~~~~~~~v~~G-~~~~l~C~~~~~-p~~-~v~W 159 (745)
.+++.+|+|.|.|.+.+ ..+. .....+.|.|.. +|.+........+.+| +.++|.|.+.+. |.+ .+.|
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W 162 (232)
T 1dn0_B 83 SSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSW 162 (232)
T ss_dssp CSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEE
T ss_pred CCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEE
Confidence 99999999999999983 2111 122335677764 3554433222235578 999999999885 776 9999
Q ss_pred Ee-CCEeccCCCCCC-----ceeecCceEEEccCCC--CCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 160 VH-NGKPISQAPPNP-----RRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 160 ~~-~g~~~~~~~~~~-----~~~~~~~~L~i~~v~~--~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
++ +|..+....... ......+.|.|.+... +|.|.|+|.|.|..+.......+.+
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp EETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred EcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 99 998875310000 1111235688988887 8899999999999887655554443
No 346
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.72 E-value=1.4e-17 Score=156.12 Aligned_cols=169 Identities=18% Similarity=0.282 Sum_probs=120.9
Q ss_pred EecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEecc---C------CCCCCcee----ecCceEEEccCCCCCCE
Q psy11701 129 TVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPIS---Q------APPNPRRK----VGPNRITIENLRKSDTG 193 (745)
Q Consensus 129 ~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~---~------~~~~~~~~----~~~~~L~i~~v~~~d~G 193 (745)
...+ ...+.+|++++|.|.+. +.+.+.|+|+ +..+. . .....++. .....|.|.+++.+|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 81 (211)
T 3tv3_L 5 TQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEA 81 (211)
T ss_dssp BCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCE
T ss_pred EeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCE
Confidence 3344 77899999999999999 8889999994 22211 0 00112222 12357999999999999
Q ss_pred EEEEEEEeCCc--eEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeecC--CCeEEEeeCCEEccCceEE-
Q psy11701 194 NYGCNATNSLG--YVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYT- 265 (745)
Q Consensus 194 ~Y~C~~~~~~g--~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p--~~~i~W~~~~~~~~~~~~~- 265 (745)
.|+|.+.+..+ .....+.|.|.. .+|.+...+....+..|+.++|.|.+.+.+ .+.+.|++++..+......
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 161 (211)
T 3tv3_L 82 VYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETT 161 (211)
T ss_dssp EEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccC
Confidence 99999999887 233446777763 466776666555555799999999998863 4789999999887542111
Q ss_pred ---Eee------cCcEEEcccCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 266 ---ILE------TGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300 (745)
Q Consensus 266 ---~~~------~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 300 (745)
... ...|.|..+..+|.|.|+|.|.|..+.....+
T Consensus 162 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 162 TPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 111 13588999988899999999999987665443
No 347
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.72 E-value=7.4e-17 Score=158.50 Aligned_cols=244 Identities=15% Similarity=0.116 Sum_probs=149.9
Q ss_pred ecCCeEEEEEEEEecCCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399 (745)
Q Consensus 320 ~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 399 (745)
..|++++|.|.+.. + ..|.|.+++..... ..+++|.|..+...|.|.|+|.+ .|.....+.+.|.
T Consensus 19 ~~G~~v~l~C~~~~-~---~~i~W~~~~~~~~~--------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~ 83 (306)
T 3d85_D 19 APGEMVVLTCDTPE-E---DGITWTLDQSSEVL--------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLH 83 (306)
T ss_dssp CCCEEEEEECSSSC-C---SSCEEEETTCCCCC--------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEE
T ss_pred ccCCcEEEECCCCC-C---CcCEEEECCccccC--------CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEE
Confidence 47999999998873 2 26889999875321 24568999999989999999999 3666555555554
Q ss_pred c-------------cCCCC--CCceeEEeecC-ceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeE---------
Q psy11701 400 V-------------PLEAP--SNFTLIQVIDA-KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE--------- 454 (745)
Q Consensus 400 ~-------------pp~~P--~~~~~~~~~~~-~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~--------- 454 (745)
. ++.|| .++.+.. ... ..+++.|.++.... ....|...+... + ..+..
T Consensus 84 ~~~~~~~~t~i~~~~~~pp~~~~lsC~~-~~~~~~~~C~W~pg~~~~---l~~~~~~~r~~~-~--~~~~~C~~~~~~~~ 156 (306)
T 3d85_D 84 KKEDGIWSTDILKDQKEPKNKTFLRCEA-KNYSGRFTCWWLTTISTD---LTFSVKSSRGSS-D--PQGVTCGAATLSAE 156 (306)
T ss_dssp EEETTEECCCSSCCCC---CCCCCEEEB-SSSSSEEEEEEEESCCSS---EEEEEEEEECSS-S--CEEEEECCCEEEEE
T ss_pred eccCCcceeeeecccCCCCCCCcceEEc-CCcccCcEEEecCCCCCc---eeEEEEEEecCC-C--CcceECCCCCCCcc
Confidence 2 12223 3566544 333 38999999965322 223444432111 1 11111
Q ss_pred -EEEccCce--eEE--EecccccC----cceeEEEEEecCCCCCCCCcceEEe-CCCCCCCCCCceeEEEcCC-ceEEEE
Q psy11701 455 -LIVNKGES--TTT--EVDKFVPA----SKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGS-SAFYLK 523 (745)
Q Consensus 455 -~~~~~~~~--~~~--~i~~L~~~----~~Y~~~V~a~n~~G~g~~S~~~~~~-t~~~~P~~p~~~~~~~~~~-~~i~l~ 523 (745)
..+ .... .++ ....+.+. ..|.|+|.|.|..|....+ ..+. +....|.||.++.+..... ..+.|+
T Consensus 157 ~c~v-~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~--~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vs 233 (306)
T 3d85_D 157 RVRG-DNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYT--SSFFIRDIIKPDPPKNLQLKPLKNSRQVEVS 233 (306)
T ss_dssp EEC---CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEE--EEECHHHHBCCCCCEEEEEEEC----CEEEE
T ss_pred ceee-cCccccceeeeeeccccccccccEEEEEEEEEEccCCccccc--eEEEehhcEecCCCceEEEEEecCCCcEEEE
Confidence 011 0100 111 12233333 4799999999998864332 3332 3346788999999987544 789999
Q ss_pred eeCCCCCCCc----eeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceee
Q psy11701 524 WVKPEQPNGV----LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598 (745)
Q Consensus 524 W~~p~~~~g~----i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~ 598 (745)
|.+|...+.+ ...|.|+|+..+...+.... ....+++.| .+++.|+|+|+|.+..|.|.+|+++.
T Consensus 234 W~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~-------~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 234 WEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRV-------FTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp EECCTTSCSCTTTSCEEEEEEEECC------CEE-------EESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred EcCCCCCcCCCceeeEEEEEEEEECCCCccEEEe-------eccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCC
Confidence 9998754433 37999999977654332211 223456766 46999999999999999999998864
No 348
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=1e-16 Score=154.51 Aligned_cols=174 Identities=20% Similarity=0.304 Sum_probs=121.1
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc--------------CCCCCCceee------cCceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS--------------QAPPNPRRKV------GPNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~--------------~~~~~~~~~~------~~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+.| .+.+.|+|+. ..+. ......++.. ...+|.|.++
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 4457889999999999999876 5789999842 1110 0111223322 1247999999
Q ss_pred CCCCCEEEEEEEEeCCceE--EEEEEEEEeec--------------CCeeeeCCCceEEecCceEEEEEEEeecCCCeEE
Q psy11701 188 RKSDTGNYGCNATNSLGYV--YKDVYVNVLAH--------------APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~--~~~~~l~v~~~--------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~ 251 (745)
+.+|+|.|+|.+.|..+.. .....|.|... ++.+...+....+.+|++++|.|.+.+.+.+.+.
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~ 168 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLA 168 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEE
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEE
Confidence 9999999999999973322 22356777642 3445666777788999999999999999888999
Q ss_pred Eee--CCEEc-------------cCceEEEee---cCcEEEcccCCCCCEEEEEEEEeCCceE-EEEEEEEEe
Q psy11701 252 WIH--NQKEL-------------TGGRYTILE---TGDLKITDVAFADSGEYTCFARNKLGTA-QGSGSLTVK 305 (745)
Q Consensus 252 W~~--~~~~~-------------~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~ 305 (745)
|++ ++..+ ...++.... ..+|.|.+++.+|+|.|+|.|.+..... .....|.|.
T Consensus 169 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 169 WYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999 44432 123444322 2359999999999999999998754332 233455554
No 349
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.72 E-value=1.4e-16 Score=157.43 Aligned_cols=215 Identities=15% Similarity=0.141 Sum_probs=144.6
Q ss_pred ecCCCCCCEEEEEEEEeCCceEEEEEEEEEe----ccCCCCCCceeEEeecCceeEEEEEeCCCCC----cceeeeeEEE
Q psy11701 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS----LRGHFRGYKV 440 (745)
Q Consensus 369 ~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~----~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~----~~~~i~~y~i 440 (745)
..+.....+.+++.|.| .|.+..+....+. .+++||. +.+.. ...++.|.|+|+.... .++.+.+|.|
T Consensus 66 ~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~--~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v 141 (306)
T 3s98_A 66 LKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEA--EDKAIVIHISPGTKDSVMWALDGLSFTYSL 141 (306)
T ss_dssp ---CTTSCEEEEEEEEC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEE--CSSCEEEEEECC---CCCC-----CCEEEE
T ss_pred cccCCCCcEEEEEEEEe-CCcCCCEeeeeEechhhCccCCCe-EEEEE--cCCEEEEEEECCCCCCcceeccCCcEEEEE
Confidence 34566778899999999 6655443333332 3567774 76654 4468999999543210 1578999999
Q ss_pred EEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEec--CCCCCCCCcceEEeCCCCCC-CCCCceeEEEcCC
Q psy11701 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN--GAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGS 517 (745)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n--~~G~g~~S~~~~~~t~~~~P-~~p~~~~~~~~~~ 517 (745)
.||..+.... +. +. .....++|.+|.+++.|.|+|+|+| ..|.|++|..+.+.|..+.| .+|.++.+... .
T Consensus 142 ~y~~~~~~~~-~~-~~---~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~-~ 215 (306)
T 3s98_A 142 VIWKNSSGVE-ER-IE---NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-N 215 (306)
T ss_dssp EEEETTTCCC-EE-EE---EECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEE-T
T ss_pred EEEECCCCCe-EE-Ee---cccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEe-c
Confidence 9998765432 22 22 2457899999999999999999999 78999999999988877766 57788888664 5
Q ss_pred ceEEEEeeCCCCCCCceeeEEEEEEE--------cCCcccCCcccccccccCCCcceeeecC-CCCCccEEEEEEEEecC
Q psy11701 518 SAFYLKWVKPEQPNGVLMGYKIKYQS--------VKGTKVGPLLERLPYISDPTTTSAKLAG-LEPSTKYRIHLAGYTKA 588 (745)
Q Consensus 518 ~~i~l~W~~p~~~~g~i~~Y~v~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~~V~a~n~~ 588 (745)
+++.|+|++|... .+|.++|.. .+...|.+... -.+...+.+.+.+ |.+...|.|||.|.|..
T Consensus 216 ~s~~l~W~~p~~~----~~~~v~~~~gy~~~~~~~~~~~W~~~~~----c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~ 287 (306)
T 3s98_A 216 QNYVLKWDYTYAN----MTFQVQWLHAFLKRNPGNHLYKWKQIPD----CENVKTTQCVFPQNVFQKGIYLLRVQASDGN 287 (306)
T ss_dssp TEEEEEEECSSSS----CEEEEEEEEGGGGSCC----CCCEECGG----GTTBSSSEEEEEGGGSCSSEEEEEEEEECSS
T ss_pred CEEEEEeCCCCCc----EEEEEEEehhhhhccccccccCceECCC----ceeCCCccccCchhhcccCCEEEEEEEccCC
Confidence 7899999997632 256666653 22223321100 1133456778887 45666999999999999
Q ss_pred CCCCCcceeeecc
Q psy11701 589 GDGAESKYLFYVP 601 (745)
Q Consensus 589 G~g~~S~~~~~~~ 601 (745)
|.|.+|+...+.+
T Consensus 288 ~~s~~s~~~~~~~ 300 (306)
T 3s98_A 288 NTSFWSEEIKFDT 300 (306)
T ss_dssp CBCCCCCCEEEEC
T ss_pred CccccccccccCc
Confidence 9999987765543
No 350
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.72 E-value=1.5e-16 Score=149.52 Aligned_cols=163 Identities=18% Similarity=0.274 Sum_probs=114.7
Q ss_pred EecCceeEeeCCCeEEEEEEEeec-------CCCeEEEEeCCEec------c--------CCCCCCceee------cCce
Q psy11701 129 TVEPEFINAAEEETVTFECKASGL-------PEPEIHWVHNGKPI------S--------QAPPNPRRKV------GPNR 181 (745)
Q Consensus 129 ~~~~~~~~v~~G~~~~l~C~~~~~-------p~~~v~W~~~g~~~------~--------~~~~~~~~~~------~~~~ 181 (745)
...|....+.+|++++|.|.+.+. +.+.+.|+|++... . ......+... .+.+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 344777889999999999999753 46799999987531 0 0111223332 2347
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceEE----EEEEEEEeec--CCeeeeCCCceEEecCceEEEEEEEeec----CCCeEE
Q psy11701 182 ITIENLRKSDTGNYGCNATNSLGYVY----KDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGA----PKPEVN 251 (745)
Q Consensus 182 L~i~~v~~~d~G~Y~C~~~~~~g~~~----~~~~l~v~~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~----p~~~i~ 251 (745)
|.|.+++.+|+|.|+|.+.+..+... ..+.|.|... +|.+.. +. .+.+|+.++|.|.+.+. |.+.+.
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEE
Confidence 99999999999999999998764332 2466777653 344433 22 26689999999999764 778999
Q ss_pred EeeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 252 W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
|++++..+..... ...+.|.|..+..+|.|.|+|.|.|..+..
T Consensus 161 W~~~~~~~~~~~~--~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~ 203 (214)
T 2zg1_A 161 WTGNALSPLDPET--TRSSELTLTPRPEDHGTNLTCQMKRQGAQV 203 (214)
T ss_dssp EESSTTSSSCSSC--CCSSEEEECCCTTCCSCEEEEEEECC----
T ss_pred EeCCCCccCCCCc--eeEEEEEEecccHHcCcEEEEEEEeCCCCc
Confidence 9999865433221 345679999999999999999999976543
No 351
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.72 E-value=2.8e-17 Score=154.46 Aligned_cols=174 Identities=16% Similarity=0.170 Sum_probs=114.4
Q ss_pred EeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--Ee---c-------------CCCCCeEeccC--CcEEEEccC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VP---I-------------NPSDRISQGNY--GKSLIIKHV 94 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~---i-------------~~~~~~~~~~~--~~~L~i~~~ 94 (745)
+..|..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. + ....|+.+... ..+|.|.++
T Consensus 3 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (215)
T 3nl4_H 3 VEESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSP 82 (215)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSC
T ss_pred eEcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCC
Confidence 456778889999999999999864 35689999732 11 1 01244544332 236999999
Q ss_pred CCCCCEEEEEEEEeCCee---eEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeecCC--CeEEEEeCCEe
Q psy11701 95 EFSDQGSYTCEVSNGVGE---AKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKP 165 (745)
Q Consensus 95 ~~~d~G~Y~C~~~~~~g~---~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~--~~v~W~~~g~~ 165 (745)
+.+|+|.|.|.+.+..+. .......|.|. .+|.+...+....+.+|+.++|.|.+.+.++ ..+.|+++|..
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 162 (215)
T 3nl4_H 83 TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLT 162 (215)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEE
Confidence 999999999999876431 12233567776 5666664554446778999999999988543 36889999975
Q ss_pred ccCCCCCCceeecCceEEE---ccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 166 ISQAPPNPRRKVGPNRITI---ENLRKSDTGNYGCNATNSLGYVYKDVYV 212 (745)
Q Consensus 166 ~~~~~~~~~~~~~~~~L~i---~~v~~~d~G~Y~C~~~~~~g~~~~~~~l 212 (745)
+..... ......++.+.+ ..+...| |.|+|.|.|..+.......|
T Consensus 163 ~~~~~~-~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 163 NGVRTF-PSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp TTEEEC-CCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred CCeEec-CceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 542211 112223445544 5567778 99999999998876555444
No 352
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.72 E-value=5.6e-17 Score=152.22 Aligned_cols=170 Identities=19% Similarity=0.289 Sum_probs=119.3
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecC---CCeEEEEeCC--Eecc---------CCCCCCceee----cCceEEEccCCC
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLP---EPEIHWVHNG--KPIS---------QAPPNPRRKV----GPNRITIENLRK 189 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p---~~~v~W~~~g--~~~~---------~~~~~~~~~~----~~~~L~i~~v~~ 189 (745)
+.. |....+.+|++++|.|.+.+.| .+.+.|+|++ ..+. ......++.. ....|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 344 7788899999999999998876 4789999953 2220 0011223322 234899999999
Q ss_pred CCCEEEEEEEEeCCceEE-EEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeecCCC--eEEEeeCCEEccCce
Q psy11701 190 SDTGNYGCNATNSLGYVY-KDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGR 263 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g~~~-~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~~ 263 (745)
+|+|.|+|.+.+..+... ....|.|.. .+|.+...+....+..|+.++|.|.+.+.+++ .+.|++++..+....
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 162 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGM 162 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCe
Confidence 999999999998776432 234566632 36666655444445579999999999886433 899999998876442
Q ss_pred EE----Eeec------CcEEEcccCCCCCEEEEEEEEeCCceEEE
Q psy11701 264 YT----ILET------GDLKITDVAFADSGEYTCFARNKLGTAQG 298 (745)
Q Consensus 264 ~~----~~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 298 (745)
.. ...+ ..|.|..+..+|.|.|+|.|.|.......
T Consensus 163 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 163 ETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp EECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred ecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 21 1111 25889999889999999999998765433
No 353
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.71 E-value=2.4e-17 Score=159.91 Aligned_cols=166 Identities=17% Similarity=0.192 Sum_probs=108.5
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEecC---C----C-----------CCeEe---ccCCcEEEEc
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPIN---P----S-----------DRISQ---GNYGKSLIIK 92 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i~---~----~-----------~~~~~---~~~~~~L~i~ 92 (745)
+...|..+.+.+|++|+|.|.+.+.+.+.+.|+|. +..+. . . .++.. .....+|.|.
T Consensus 5 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 84 (259)
T 3omz_A 5 LEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILR 84 (259)
T ss_dssp ------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEES
T ss_pred cccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEEC
Confidence 44567788899999999999999888889999982 21110 0 0 11111 1223479999
Q ss_pred cCCCCCCEEEEEEEEeCCee--eEEEEEEEEEEe-----------------cCeEEecCceeEeeCCCeEEEEEEEeec-
Q psy11701 93 HVEFSDQGSYTCEVSNGVGE--AKSYSIDLSVLA-----------------APYFTVEPEFINAAEEETVTFECKASGL- 152 (745)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~g~--~~~~~~~l~V~~-----------------~p~~~~~~~~~~v~~G~~~~l~C~~~~~- 152 (745)
+++.+|+|.|+|.+.+..+. .......|.|.. .|.+...|....+.+|++++|.|.+.+.
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 164 (259)
T 3omz_A 85 NLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSW 164 (259)
T ss_dssp SCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCC
T ss_pred CCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCcc
Confidence 99999999999999986542 223445677765 3566777888899999999999998774
Q ss_pred CCCeEEEEeCC--Eecc---------CCCCCCceee------cCceEEEccCCCCCCEEEEEEEEe
Q psy11701 153 PEPEIHWVHNG--KPIS---------QAPPNPRRKV------GPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 153 p~~~v~W~~~g--~~~~---------~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
+.+.+.|+|++ ..+. ......++.. ....|.|.+++.+|+|.|+|.+.+
T Consensus 165 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 165 WSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp SSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 77899999843 1110 0000112222 235699999999999999999985
No 354
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.71 E-value=4.9e-17 Score=138.62 Aligned_cols=118 Identities=22% Similarity=0.331 Sum_probs=99.4
Q ss_pred EEEecCCCCCCCCc-ceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCccccccc
Q psy11701 480 VLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558 (745)
Q Consensus 480 V~a~n~~G~g~~S~-~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~ 558 (745)
|.|+|..|.|++|. .+.++|.+++|++|.++++...+.++|.|+|++|.+.+|.|.+|.|+|+..+..... +.. .
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~---~ 78 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT-ATV---E 78 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC-CCE---E
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce-EEE---E
Confidence 67999999999997 488999999999999999999999999999999988889999999999987543211 110 0
Q ss_pred ccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 559 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
........++|.+|.|++.|.|+|.|.|..|.|++|..+.+.+
T Consensus 79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 121 (130)
T 1wfo_A 79 VLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 121 (130)
T ss_dssp EECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEec
Confidence 1256778999999999999999999999999999987765443
No 355
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.71 E-value=5.5e-17 Score=150.77 Aligned_cols=165 Identities=20% Similarity=0.313 Sum_probs=115.1
Q ss_pred eeEeeCCCeEEEEEEEe----ecCCCeEEEEeCCEeccCC---------CCCCce---eecCceEEEccCCCCCCEEEEE
Q psy11701 134 FINAAEEETVTFECKAS----GLPEPEIHWVHNGKPISQA---------PPNPRR---KVGPNRITIENLRKSDTGNYGC 197 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~~~----~~p~~~v~W~~~g~~~~~~---------~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C 197 (745)
...+.+|+++.|.|.+. +.|.+.+.|++++..+... ....+. ..++..|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 45688999999999985 3466799999999876310 001111 1245789999999999999999
Q ss_pred EEEeCCceE-----EEEEEEEEeecC--CeeeeCCCceEEecCceEEEEEEEe-ecCCCeEEEeeCCEEccCceEEEee-
Q psy11701 198 NATNSLGYV-----YKDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKELTGGRYTILE- 268 (745)
Q Consensus 198 ~~~~~~g~~-----~~~~~l~v~~~~--p~~~~~~~~~~v~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~- 268 (745)
.+.|..|.. ...+.|.|...+ |.+... ....|+.++|.|.+. +.|.+.|.|++++..+.........
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 999976543 345666666422 222211 123588999999995 8899999999999887644332222
Q ss_pred -c-CcEE---EcccCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 269 -T-GDLK---ITDVAFADSGEYTCFARNKLGTAQGSGSL 302 (745)
Q Consensus 269 -~-~~l~---i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 302 (745)
. +.+. +..+...|.|.|+|.|.|..+..+..+.+
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 2 2222 23455689999999999999887766543
No 356
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.71 E-value=6.4e-17 Score=156.05 Aligned_cols=179 Identities=15% Similarity=0.153 Sum_probs=119.1
Q ss_pred eEeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--E---ec--------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--V---PI--------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~---~i--------------~~~~~~~~~~----~~~~L~ 90 (745)
.+..+..+.+.+|++++|.|.+.+. +...+.|+|.. . .+ ...+|+.+.. ...+|+
T Consensus 3 ~v~~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (253)
T 3liz_H 3 QLVESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQ 82 (253)
T ss_dssp EEEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEE
T ss_pred eEEcCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEE
Confidence 3456777889999999999999763 35689999832 1 11 0124554432 223699
Q ss_pred EccCCCCCCEEEEEEEEeCC---eeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEe
Q psy11701 91 IKHVEFSDQGSYTCEVSNGV---GEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVH 161 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~---g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~ 161 (745)
|.+++.+|+|.|.|.+.+.. .........|.|. .+|.+...+....+.+|+.++|.|.+.+ .|.+ .+.|++
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 162 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEe
Confidence 99999999999999997642 1111233466665 4666665555556678999999999988 6766 899999
Q ss_pred CCEeccCCCCCC----ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 162 NGKPISQAPPNP----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 162 ~g~~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
+|..+....... ......+.|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 163 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp GTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 987442111000 111123579999999999 99999999998876666555543
No 357
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.71 E-value=7.6e-17 Score=155.54 Aligned_cols=169 Identities=16% Similarity=0.192 Sum_probs=116.8
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Eec------C-----------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPI------N-----------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i------~-----------~~~~~~~~~----~~~~L~ 90 (745)
.+..|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ . ...|+.+.. ...+|+
T Consensus 9 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 88 (261)
T 2xqy_G 9 QLQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQ 88 (261)
T ss_dssp EEECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred eEECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEE
Confidence 34557788899999999999998876 5789999852 211 1 024555432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCCee--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeC
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVGE--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHN 162 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~ 162 (745)
|.+++.+|+|.|.|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+++
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~ 168 (261)
T 2xqy_G 89 LSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 168 (261)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecC
Confidence 9999999999999999985421 112335677764 4555544333346789999999999884 766 9999999
Q ss_pred CEeccCCCCCC----ceeecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 163 GKPISQAPPNP----RRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 163 g~~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
+..+....... ......+.|.|.++..+| |.|+|.|.|....
T Consensus 169 g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 169 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp TCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred CCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 87653211110 111123579999988888 9999999997654
No 358
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=6.4e-17 Score=154.94 Aligned_cols=176 Identities=18% Similarity=0.247 Sum_probs=117.7
Q ss_pred eEeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--Eec--------------C---CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VPI--------------N---PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~i--------------~---~~~~~~~~~----~~~~L~ 90 (745)
+...|..+.+.+|++++|.|.+.+. +.+.+.|+|+. ..+ . ...|+.+.. ...+|+
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 3455778889999999999999875 56799999842 211 0 235665432 235899
Q ss_pred EccCCCCCCEEEEEEEEeCC------eeeEEEEEEEEEEec-------CeEEec-CceeEeeCCCeEEEEEEEeec-CC-
Q psy11701 91 IKHVEFSDQGSYTCEVSNGV------GEAKSYSIDLSVLAA-------PYFTVE-PEFINAAEEETVTFECKASGL-PE- 154 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~------g~~~~~~~~l~V~~~-------p~~~~~-~~~~~v~~G~~~~l~C~~~~~-p~- 154 (745)
|.+++.+|+|.|.|.+.+.. .......+.|.|... |...+. |....+.+|+.++|.|.+.|. |.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~ 163 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDV 163 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCC
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCC
Confidence 99999999999999998752 111223457777752 333222 444456679999999999885 65
Q ss_pred CeEEEEeCCE-eccCCCCCCcee-----ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy11701 155 PEIHWVHNGK-PISQAPPNPRRK-----VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213 (745)
Q Consensus 155 ~~v~W~~~g~-~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~ 213 (745)
+.+.|++++. .+.......... ...+.|.|.++.. | |.|+|.|.|..+.......+.
T Consensus 164 ~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~ 226 (242)
T 1hxm_B 164 IKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEII 226 (242)
T ss_dssp EEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEE
T ss_pred eEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEee
Confidence 6999999987 554221110111 1124688887765 4 999999999887643333333
No 359
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.71 E-value=6.5e-17 Score=156.29 Aligned_cols=184 Identities=17% Similarity=0.262 Sum_probs=124.6
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEecc--------------CCCCCCceeec------CceEE
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKPIS--------------QAPPNPRRKVG------PNRIT 183 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~~~--------------~~~~~~~~~~~------~~~L~ 183 (745)
+...|....+.+|++++|.|.+.+.+ .+.+.|+|. +..+. ......++... ...|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 34556778899999999999998744 679999982 21110 00111222221 23499
Q ss_pred EccCCCCCCEEEEEEEEeCCceEE-EEEEEEEeec--------------CCeeeeCCCceEEecCceEEEEEEEeecCCC
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAH--------------APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v~~~--------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
|.+++.+|+|.|+|.+.+..+... ....|.|... ++.+...|....+.+|++++|.|.+.+.+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc
Confidence 999999999999999998655432 3456666632 5667777778889999999999999988776
Q ss_pred ----eEEEeeC--CEEcc-------------CceEEEeec---CcEEEcccCCCCCEEEEEEEEeCCceE-EEEEEEEEe
Q psy11701 249 ----EVNWIHN--QKELT-------------GGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTA-QGSGSLTVK 305 (745)
Q Consensus 249 ----~i~W~~~--~~~~~-------------~~~~~~~~~---~~l~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~ 305 (745)
.+.|+++ +..+. ..++..... .+|.|.+++.+|+|.|.|.+.|..+.. .....|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 8999984 22111 134433222 259999999999999999998865432 344567776
Q ss_pred ecceee
Q psy11701 306 EHTHIT 311 (745)
Q Consensus 306 ~~p~~~ 311 (745)
..+.++
T Consensus 244 ~~~~~~ 249 (253)
T 3uzq_A 244 RPLEHH 249 (253)
T ss_dssp CC----
T ss_pred CCCCCc
Confidence 655443
No 360
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.71 E-value=9e-17 Score=154.60 Aligned_cols=168 Identities=20% Similarity=0.250 Sum_probs=117.5
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEE--------------CCEecCC----CCCeEeccC---CcEEEEccC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK--------------DGVPINP----SDRISQGNY---GKSLIIKHV 94 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~--------------~~~~i~~----~~~~~~~~~---~~~L~i~~~ 94 (745)
+...|..+.+.+|++++|.| ..+.+.+.+.|+| ++..+.. ..|+.+... ..+|.|.++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 83 (245)
T 4ei6_B 5 VLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPT 83 (245)
T ss_dssp CEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSC
T ss_pred eEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCC
Confidence 45667788999999999999 6677888999998 2222211 156655432 348999999
Q ss_pred CCCCCEEEEEEEEeCC---eeeEEEEEEEEEE------ecCeEEe-cCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeC
Q psy11701 95 EFSDQGSYTCEVSNGV---GEAKSYSIDLSVL------AAPYFTV-EPEFINAAEEETVTFECKASG-LPEP-EIHWVHN 162 (745)
Q Consensus 95 ~~~d~G~Y~C~~~~~~---g~~~~~~~~l~V~------~~p~~~~-~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~ 162 (745)
+.+|+|.|+|.+.+.. .........|.|. .+|.+.. .+....+.+|+.++|.|.+.+ .|.+ .+.|+++
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~ 163 (245)
T 4ei6_B 84 ALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 163 (245)
T ss_dssp CGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEEC
Confidence 9999999999998531 2222234567776 3555543 455555677999999999988 4544 8999999
Q ss_pred CEeccCCCCCC------------ceeecCceEEEccCCCCC-CEEEEEEEEeCCc
Q psy11701 163 GKPISQAPPNP------------RRKVGPNRITIENLRKSD-TGNYGCNATNSLG 204 (745)
Q Consensus 163 g~~~~~~~~~~------------~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~g 204 (745)
|..+....... ........|.|.....+| +|.|+|.|.|...
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp TEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 99886432110 111112358888888888 9999999998653
No 361
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.71 E-value=8.3e-17 Score=154.26 Aligned_cols=168 Identities=20% Similarity=0.339 Sum_probs=116.7
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEEC--------------CEecC---CCCCeEecc---CCcEEEEccCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--------------GVPIN---PSDRISQGN---YGKSLIIKHVE 95 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--------------~~~i~---~~~~~~~~~---~~~~L~i~~~~ 95 (745)
+...|..+.+.+|++++|.|.+.+ +.+.+.|+|. +.... ...|+.+.. ...+|.|.+++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 445677889999999999999875 7779999982 21111 124555432 23489999999
Q ss_pred CCCCEEEEEEEEe--CCeeeEEEEEEEEEE------ecCeEEe-cCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCE
Q psy11701 96 FSDQGSYTCEVSN--GVGEAKSYSIDLSVL------AAPYFTV-EPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGK 164 (745)
Q Consensus 96 ~~d~G~Y~C~~~~--~~g~~~~~~~~l~V~------~~p~~~~-~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~ 164 (745)
.+|+|.|+|.+.+ ...........|.|. .+|.+.. .+....+.+|+.++|.|.+.+ .|.+ .+.|+++|.
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~ 163 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGK 163 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCE
Confidence 9999999999973 222222233556665 3555543 344555677999999999988 5656 899999999
Q ss_pred eccCCCCCC--ceeecC------ceEEEccCCCCC-CEEEEEEEEeCCc
Q psy11701 165 PISQAPPNP--RRKVGP------NRITIENLRKSD-TGNYGCNATNSLG 204 (745)
Q Consensus 165 ~~~~~~~~~--~~~~~~------~~L~i~~v~~~d-~G~Y~C~~~~~~g 204 (745)
.+....... .....+ +.|.|..+..+| +|.|+|.|.|...
T Consensus 164 ~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 164 EVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred ECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 986432111 011112 348899998888 7799999998754
No 362
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=3.3e-17 Score=138.42 Aligned_cols=115 Identities=23% Similarity=0.332 Sum_probs=99.6
Q ss_pred EEEEecCCCCCCCCcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCCCC--CCCceeeEEEEEEEcCCcccCCcccc
Q psy11701 479 RVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKPEQ--PNGVLMGYKIKYQSVKGTKVGPLLER 555 (745)
Q Consensus 479 ~V~a~n~~G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p~~--~~g~i~~Y~v~~~~~~~~~~~~~~~~ 555 (745)
+|.|.|..|.|++|..+.+.|.++.|. +|.++++...+.++|.|+|++|.. .+|.|.+|.|+|+..+...+..
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~---- 78 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEME---- 78 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEE----
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceE----
Confidence 578999999999999999999999888 788999999999999999999986 7889999999999876543321
Q ss_pred cccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 556 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
.......++.|.+|+|++.|.|+|.|.|..|.|++|..+.+.
T Consensus 79 ---~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 120 (124)
T 2ed9_A 79 ---TLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAE 120 (124)
T ss_dssp ---EECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEE
T ss_pred ---EecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEE
Confidence 125567899999999999999999999999999999876544
No 363
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.71 E-value=5.7e-15 Score=133.83 Aligned_cols=242 Identities=16% Similarity=0.254 Sum_probs=164.9
Q ss_pred eEEecCceeEeeCCCeEEEEEEEee-cC---CCeEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASG-LP---EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~-~p---~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.+...|....+..|+.++|+|.+.+ .| +..++|+|||..+.. ....|.|..+...|+|.|+|.+.+.
T Consensus 4 tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG---------aT~tLti~s~t~sdSG~YqCvVTDa 74 (304)
T 3shs_A 4 TVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN---------NTATLTVADATSENAGSYKVTVQDT 74 (304)
T ss_dssp EEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEEEET
T ss_pred EEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC---------CcceEEeeeccccCCeEEEEEEEEC
Confidence 3445577778999999999999965 45 348999999988652 2358999999999999999999998
Q ss_pred CceEEEEEEEEEeecCC-ee-eeCCCceEEecCceEEEEEEE--ee-cC-----CCeEEEeeCCEEccCceEEEeecCcE
Q psy11701 203 LGYVYKDVYVNVLAHAP-EI-TEAPKDEYTVDGKTVVLTCRV--FG-AP-----KPEVNWIHNQKELTGGRYTILETGDL 272 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~p-~~-~~~~~~~~v~~g~~~~l~C~~--~~-~p-----~~~i~W~~~~~~~~~~~~~~~~~~~l 272 (745)
.|....+..+.|...+. .+ ...|....+..|..+.|.+.+ .+ .+ ...++|++++..+... ..|
T Consensus 75 ~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA-------q~l 147 (304)
T 3shs_A 75 DTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT-------QDI 147 (304)
T ss_dssp TTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS-------SEE
T ss_pred CCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc-------ccc
Confidence 88776554444443222 22 223555556667889999887 43 33 3589999999876543 257
Q ss_pred EEcccCCCCCEEEEEEEEeCCce--EEEEEEEEEeecceeecCCCcEEEecCCeEEEEEEEE--------ecCCCCcEEE
Q psy11701 273 KITDVAFADSGEYTCFARNKLGT--AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV--------SDPSLKLSIV 342 (745)
Q Consensus 273 ~i~~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~~p~~~~~p~~~~~~~g~~~~l~C~~~--------~~~~~~~~i~ 342 (745)
++......++|.|+|.+.+..+. .+.+..+.+..............+..|+.+.|.-.+. |.|...+.+.
T Consensus 148 T~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (304)
T 3shs_A 148 TIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYN 227 (304)
T ss_dssp EECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEE
T ss_pred ceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEE
Confidence 77788889999999999998763 4556666665444333444556677888888876655 2233346677
Q ss_pred EeeC--Cee----ccCC---CCCeEEEcCCeEEEEecCCCCCCEEEEEEEE
Q psy11701 343 WLRG--SEP----IDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384 (745)
Q Consensus 343 W~~~--~~~----~~~~---~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~ 384 (745)
|+.. ++. +... ....+.+..++.|--.....+|...|.|.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 228 WYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHH
Confidence 8743 221 1000 1123444455556666667778889999886
No 364
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=1.3e-16 Score=129.55 Aligned_cols=96 Identities=27% Similarity=0.487 Sum_probs=83.2
Q ss_pred CCCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCC--cEEEEccCCCCCCEEEEEEEE
Q psy11701 30 RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG--KSLIIKHVEFSDQGSYTCEVS 107 (745)
Q Consensus 30 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~ 107 (745)
+..|+.|+..|++..+.+|+++.|.|.+.|.|.|.|+|+|||..|..+.++.+...+ .+|.|.+++.+|+|.|+|.|.
T Consensus 10 ~~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 345677888999999999999999999999999999999999999988887765433 479999999999999999999
Q ss_pred eCCeeeEEEEEEEEEEecC
Q psy11701 108 NGVGEAKSYSIDLSVLAAP 126 (745)
Q Consensus 108 ~~~g~~~~~~~~l~V~~~p 126 (745)
|..|... .++.|.|..+|
T Consensus 90 N~~G~~~-~~~~l~V~~pP 107 (107)
T 3knb_B 90 NAAGEAY-AAAAVTVLEPP 107 (107)
T ss_dssp ETTEEEE-EEEEEEEEC--
T ss_pred ECCCEEE-EEEEEEEEcCC
Confidence 9999876 67889998765
No 365
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.70 E-value=1.5e-16 Score=153.69 Aligned_cols=176 Identities=21% Similarity=0.323 Sum_probs=123.6
Q ss_pred ecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEecc---C-----------CCCCCceeec------CceEEEc
Q psy11701 130 VEPEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKPIS---Q-----------APPNPRRKVG------PNRITIE 185 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~~~---~-----------~~~~~~~~~~------~~~L~i~ 185 (745)
..|....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. . .....++... ...|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 345667899999999999998865 579999994 22210 0 0011233221 2489999
Q ss_pred cCCCCCCEEEEEEEEeCCce-----EEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEEeecCCC-----eEEEee-
Q psy11701 186 NLRKSDTGNYGCNATNSLGY-----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP-----EVNWIH- 254 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~-----~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~-----~i~W~~- 254 (745)
+++.+|+|.|+|.+.+..|. ....+.|.|.. ++.+...|....+.+|++++|.|.+.+.+.+ .+.|++
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~-~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS-DIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQ 163 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECC-CCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeecc-cccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEE
Confidence 99999999999999988552 22335677764 5666677777889999999999999988765 899999
Q ss_pred -CCEEcc-------------CceEEEee---cCcEEEcccCCCCCEEEEEEEEeCCce-EEEEEEEEEee
Q psy11701 255 -NQKELT-------------GGRYTILE---TGDLKITDVAFADSGEYTCFARNKLGT-AQGSGSLTVKE 306 (745)
Q Consensus 255 -~~~~~~-------------~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~ 306 (745)
++..+. ..++.... ...|.|.+++.+|+|.|+|.+.+.... ......|.|..
T Consensus 164 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 164 KPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp CTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 554321 23444322 236999999999999999999875432 22344566653
No 366
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.70 E-value=7.5e-18 Score=159.28 Aligned_cols=188 Identities=14% Similarity=0.191 Sum_probs=103.7
Q ss_pred EEeeCC---CCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceee
Q psy11701 522 LKWVKP---EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598 (745)
Q Consensus 522 l~W~~p---~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~ 598 (745)
.+|... .+.++.|++|.|++.......+ ... .....+++++.+|.|++.|.|+|.|+|..|.|++|....
T Consensus 7 ~qW~dvgv~~~~~~~Vt~Y~~~~~~~~~~~~-~~~------~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~ 79 (232)
T 4go6_B 7 NQWFDVGVIKGTNVMVTHYFLPPDDAVPSDD-DLG------TVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISA 79 (232)
T ss_dssp -CCEEEEEESSSEEEECEEECCCC-------------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEE
T ss_pred CEeecCCEecCCCEEEEEEEEEeeCCCCCcE-EEE------ECCCccEEEeCCCCCCCEEEEEEEEEeCCCcccccccee
Confidence 456432 3455678999998765432221 111 134567899999999999999999999999999987765
Q ss_pred ecccCC-CCCCC---CCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCccccccceEEeccCCCcceE
Q psy11701 599 YVPFKN-PDNVE---GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674 (745)
Q Consensus 599 ~~~~~~-~~~~~---~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y 674 (745)
..+... ++..+ .....++++.|+|.+|. ..+|.|.+|.|+|+.............. .....
T Consensus 80 ~~t~~~~~~~~~~~~~~~~~~~sv~l~W~~P~--~~~G~i~~Y~v~~~~~~~~~~~~~~~~~-------------~~~~~ 144 (232)
T 4go6_B 80 FKTCLPGFPGAPCAIKISKSPDGAHLTWEPPS--VTSGKIIEYSVYLAIQSSQAGGELKSST-------------PAQLA 144 (232)
T ss_dssp EECCCTTSCCCCEEEEEEEETTEEEEEEECCS--CCSSCCCEEEEEEEEC--------------------------CCEE
T ss_pred eeecCCCCCCCCeeeEEecCCCEEEEEEeCCC--CCCCceeeEEEEEEECCCCCcceeeecc-------------CCcee
Confidence 443221 11111 11234588999999765 3578999999999865433211111000 00000
Q ss_pred EEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceEEeCCC
Q psy11701 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740 (745)
Q Consensus 675 ~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~~~t~~ 740 (745)
.+++. .+..... ........+.+.+|.+++.|.|||+|.|.+|.|++|+.+.++++.
T Consensus 145 ~~~~~------~~~~~~~---~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 145 FMRVY------CGPSPSC---LVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp EEEEE------EESSSEE---EEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eEEEE------eccCceE---EEEccccEEeeecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 00000 0000000 011223334456899999999999999999999999877666543
No 367
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.70 E-value=6.6e-17 Score=157.83 Aligned_cols=170 Identities=22% Similarity=0.247 Sum_probs=118.1
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEE--CCEec------------CC----CCCeEecc---CCcEEEEc
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK--DGVPI------------NP----SDRISQGN---YGKSLIIK 92 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~--~~~~i------------~~----~~~~~~~~---~~~~L~i~ 92 (745)
..+...|..+.+.+|++++|.|.+. .+.+.+.|+| .+..+ .. ..|+.+.. ...+|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 3455677788999999999999986 5777999998 22211 11 15665543 24589999
Q ss_pred cCCCCCCEEEEEEEEeC-CeeeEEEEEEEEEEe------cCeEEe-cCceeEeeCCCeEEEEEEEeecCC-C-eEEEEeC
Q psy11701 93 HVEFSDQGSYTCEVSNG-VGEAKSYSIDLSVLA------APYFTV-EPEFINAAEEETVTFECKASGLPE-P-EIHWVHN 162 (745)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~-~g~~~~~~~~l~V~~------~p~~~~-~~~~~~v~~G~~~~l~C~~~~~p~-~-~v~W~~~ 162 (745)
+++.+|+|.|+|.+.+. ..........|.|.. +|.+.. .+....+.+|+.++|.|.+.+.++ + .++|+++
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 99999999999999864 122222345677765 565443 355555667999999999988554 4 8999999
Q ss_pred CEeccCCCCC------------CceeecCceEEEccCCCCC-CEEEEEEEEeCCc
Q psy11701 163 GKPISQAPPN------------PRRKVGPNRITIENLRKSD-TGNYGCNATNSLG 204 (745)
Q Consensus 163 g~~~~~~~~~------------~~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~g 204 (745)
|+.+...... .......+.|.|.....+| +|.|+|.|.|...
T Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 186 GKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp SSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 9988642111 0111112457888887777 9999999998754
No 368
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.70 E-value=2.3e-16 Score=152.72 Aligned_cols=170 Identities=22% Similarity=0.305 Sum_probs=121.6
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEee--cCCCeEEEEeCC--Eec--------------cCCCCCCceeec------Cc
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASG--LPEPEIHWVHNG--KPI--------------SQAPPNPRRKVG------PN 180 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~--~p~~~v~W~~~g--~~~--------------~~~~~~~~~~~~------~~ 180 (745)
+|.+...+....+.+|++++|.|.+.+ .+.+.+.|+|.. ..+ .......++... ..
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 456677788899999999999999987 366799999732 111 011112233322 23
Q ss_pred eEEEccCCCCCCEEEEEEEEeC------------CceEEEEEEEEEeec--------------CCeeeeCCCceEEecCc
Q psy11701 181 RITIENLRKSDTGNYGCNATNS------------LGYVYKDVYVNVLAH--------------APEITEAPKDEYTVDGK 234 (745)
Q Consensus 181 ~L~i~~v~~~d~G~Y~C~~~~~------------~g~~~~~~~l~v~~~--------------~p~~~~~~~~~~v~~g~ 234 (745)
.|.|.+++.+|+|.|.|.+.+. .+.......|.|... ++.+...+....+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 6999999999999999999986 222333456777653 45667778888899999
Q ss_pred eEEEEEEEeecCC-CeEEEeeC--CEEc-------------cCceEEEeecC---cEEEcccCCCCCEEEEEEEEeCCc
Q psy11701 235 TVVLTCRVFGAPK-PEVNWIHN--QKEL-------------TGGRYTILETG---DLKITDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 235 ~~~l~C~~~~~p~-~~i~W~~~--~~~~-------------~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~~~n~~g 294 (745)
+++|.|.+.+.+. +.+.|++. +..+ ...++.....+ +|.|.+++.+|+|.|.|.+.|...
T Consensus 166 ~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 166 RATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp CEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 9999999988776 78999983 2211 12344443333 499999999999999999987543
No 369
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.70 E-value=9.1e-17 Score=151.88 Aligned_cols=168 Identities=17% Similarity=0.286 Sum_probs=115.3
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Ee---cc-------------CCCCCCceeec------CceEEEc
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KP---IS-------------QAPPNPRRKVG------PNRITIE 185 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~---~~-------------~~~~~~~~~~~------~~~L~i~ 185 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ......++... ...|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 4556789999999999998765 6799999853 21 10 00111233221 3489999
Q ss_pred cCCCCCCEEEEEEEEeCCc-----eEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeC
Q psy11701 186 NLRKSDTGNYGCNATNSLG-----YVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHN 255 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g-----~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~ 255 (745)
+++.+|+|.|.|.+.+..+ .......|.|.. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 166 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 166 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecC
Confidence 9999999999999998654 122234666653 34555544433345689999999999986 877 9999999
Q ss_pred CEEccCceEE-E------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 256 QKELTGGRYT-I------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300 (745)
Q Consensus 256 ~~~~~~~~~~-~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 300 (745)
+..+...... . ...+.|.|.++...| |.|+|.|.|..+......
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 167 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp TBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 8765321111 1 112368999998889 999999999988754443
No 370
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.70 E-value=2.3e-16 Score=152.70 Aligned_cols=176 Identities=20% Similarity=0.387 Sum_probs=121.8
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc--------------CCCCCCceee------cCceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS--------------QAPPNPRRKV------GPNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~--------------~~~~~~~~~~------~~~~L~i~~v 187 (745)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+. ......++.. ....|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 4445689999999999998865 6799999832 1110 0001122222 1235999999
Q ss_pred CCCCCEEEEEEEEeC----CceEEEEEEEEEeec---------------CCeeeeCCCceEEecCceEEEEEEEeecCCC
Q psy11701 188 RKSDTGNYGCNATNS----LGYVYKDVYVNVLAH---------------APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~----~g~~~~~~~l~v~~~---------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~ 248 (745)
+.+|+|.|.|.+.+. .+.......|.|... ++.+...|....+.+|++++|.|.+.+.+.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 168 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS 168 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc
Confidence 999999999999987 333333466777642 6677777888889999999999999998888
Q ss_pred eEEEeeC--CEEc-------------cCceEEEeecC---cEEEcccCCCCCEEEEEEEEeCCceE-EEEEEEEEeec
Q psy11701 249 EVNWIHN--QKEL-------------TGGRYTILETG---DLKITDVAFADSGEYTCFARNKLGTA-QGSGSLTVKEH 307 (745)
Q Consensus 249 ~i~W~~~--~~~~-------------~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~~ 307 (745)
.+.|++. +..+ ...++.....+ +|.|.+++.+|+|.|.|.+.+..... .....|.|..+
T Consensus 169 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 169 NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 9999984 2111 12344443332 49999999999999999998754432 33466776654
No 371
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.70 E-value=7.3e-17 Score=151.44 Aligned_cols=170 Identities=17% Similarity=0.243 Sum_probs=113.1
Q ss_pred EeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--EecC----------------CCCCeEecc----CCcEEEEc
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPIN----------------PSDRISQGN----YGKSLIIK 92 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i~----------------~~~~~~~~~----~~~~L~i~ 92 (745)
+..|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+.. ...+|+|.
T Consensus 4 v~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (215)
T 1c5d_H 4 LLESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMN 83 (215)
T ss_dssp EEEECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEES
T ss_pred EEcCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEEC
Confidence 4557778899999999999998764 4689999852 2210 123555432 12489999
Q ss_pred cCCCCCCEEEEEEEEeCCee--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCCE
Q psy11701 93 HVEFSDQGSYTCEVSNGVGE--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-PEP-EIHWVHNGK 164 (745)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~g~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g~ 164 (745)
+++.+|+|.|.|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .+.|+++|.
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 163 (215)
T 1c5d_H 84 SLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGAL 163 (215)
T ss_dssp SCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTT
T ss_pred CCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCc
Confidence 99999999999999875421 111235677763 4555544433346789999999999985 877 999999987
Q ss_pred eccCCCCCCceeecCceEE----EccCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 165 PISQAPPNPRRKVGPNRIT----IENLRKSDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 165 ~~~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~~~~~~g~~~~~ 209 (745)
.+.... ....... +.+. +.....+| |.|+|.|.|..+.....
T Consensus 164 ~~~~~~-~~~~~~~-g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 164 SSDVHT-FPAVLQS-GLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp CCSCCB-CCCEEET-TEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCceEe-cCcccCC-CCEEEEEEEecccCCC-CeEEEEEEeCCCCccEE
Confidence 643211 1111111 2211 22444456 99999999988765433
No 372
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=8e-17 Score=151.98 Aligned_cols=170 Identities=20% Similarity=0.276 Sum_probs=114.9
Q ss_pred ecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEecc------C--------CCCCCceee------cCceEEEc
Q psy11701 130 VEPEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKPIS------Q--------APPNPRRKV------GPNRITIE 185 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~~~------~--------~~~~~~~~~------~~~~L~i~ 185 (745)
..|....+.+|++++|.|.+.+.+ .+.+.|+|+ |..+. . .....++.. ....|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 345667889999999999999865 679999996 33221 0 001123322 23589999
Q ss_pred cCCCCCCEEEEEEEEeCCce----EEEEEEEEEeec---CCeeeeCCCceEEecCceEEEEEEEee-cCCC-eEEEeeCC
Q psy11701 186 NLRKSDTGNYGCNATNSLGY----VYKDVYVNVLAH---APEITEAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQ 256 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~----~~~~~~l~v~~~---~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~ 256 (745)
+++.+|+|.|+|.+.+..+. ....+.|.|... +|.+...+....+.+|+.++|.|.+.+ .|.+ .+.|++++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 99999999999999997631 112456676642 355544443345678999999999998 7888 99999998
Q ss_pred EEccC---ceEE----EeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 257 KELTG---GRYT----ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300 (745)
Q Consensus 257 ~~~~~---~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 300 (745)
..+.. .... ....+.|.|.... .|.|.|+|.|.|..+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp BCTTEEECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEE
T ss_pred cccceEecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEE
Confidence 75421 1100 0112358884444 466999999999887754443
No 373
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.69 E-value=2.3e-17 Score=153.82 Aligned_cols=171 Identities=18% Similarity=0.340 Sum_probs=108.7
Q ss_pred CCeeEeecccee-EecCCcEEEEEEEeecC----CCeeEEEECCEecCCCC--CeEeccCCcEEEE------ccCCCCCC
Q psy11701 33 PKQQYVTRKKEV-ALRNKKVELFCIFGGTP----LPQTIWSKDGVPINPSD--RISQGNYGKSLII------KHVEFSDQ 99 (745)
Q Consensus 33 p~~~~~~~~~~~-v~~G~~~~l~C~~~g~p----~~~v~W~~~~~~i~~~~--~~~~~~~~~~L~i------~~~~~~d~ 99 (745)
|..++.+|.... +.+|++++|.|.+.|.+ .+.|.|+|++.++.... .... ..++.|.+ .....+|+
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~-~~~g~~~~~~~l~i~~~d~~d~ 80 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREE-QYNSTYRVVSVLTVLHQDWLNG 80 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEE-CTTSCEEEEEEEECCHHHHHTT
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCcee-ccCCcEEEEEEEEEEHHHccCC
Confidence 555555555444 37999999999998875 24999999998876431 1111 11223333 23333459
Q ss_pred EEEEEEEEeCCeee-EEEEEEE--EEEecCeEEecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEeccCCCCCCc
Q psy11701 100 GSYTCEVSNGVGEA-KSYSIDL--SVLAAPYFTVEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 100 G~Y~C~~~~~~g~~-~~~~~~l--~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~~~~~~~~ 174 (745)
|.|+|.|.+..+.. .+..+.+ .+..+|.+...+.......|+.+.|.|.+.|. |. +.++|+|+|..+........
T Consensus 81 g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 160 (207)
T 1l6x_A 81 KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP 160 (207)
T ss_dssp CCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCC
T ss_pred ceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCc
Confidence 99999999986653 2233332 34567776655443323456779999999984 54 49999999998763211111
Q ss_pred eeecCc------eEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 175 RKVGPN------RITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 175 ~~~~~~------~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
....++ .|.|.....+|+|.|+|.|.|...
T Consensus 161 ~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 161 VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 122333 344555555679999999998753
No 374
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.69 E-value=1.1e-16 Score=150.37 Aligned_cols=170 Identities=20% Similarity=0.312 Sum_probs=120.2
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC---Ee--cc------CCCCCCceee----cCceEEEccCCCC
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP--IS------QAPPNPRRKV----GPNRITIENLRKS 190 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g---~~--~~------~~~~~~~~~~----~~~~L~i~~v~~~ 190 (745)
|.+...|....+.+|++++|.|.+.+.|.+.+.|+|.+ .. +. ......++.. ....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 44556678889999999999999999888999999832 11 00 0001122221 2348999999999
Q ss_pred CCEEEEEEEEeCCceEE-EEEEEEEe--ecCCeeeeCCCceEEecCceEEEEEEEeecCC--CeEEEeeCCEEccCce-E
Q psy11701 191 DTGNYGCNATNSLGYVY-KDVYVNVL--AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGR-Y 264 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~~~-~~~~l~v~--~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~-~ 264 (745)
|+|.|+|.+.+..+... ....|.|. ..+|.+...+....+..|+.++|.|.+.+.++ +.+.|++++..+..+. .
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 161 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQ 161 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEe
Confidence 99999999998754322 23455552 34677776666666667889999999988654 3899999998876532 1
Q ss_pred E--E--eec------CcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 265 T--I--LET------GDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 265 ~--~--~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
. . ..+ ..|.|.....+|.|.|+|.|.|....
T Consensus 162 ~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 162 SVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred ccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 1 1 111 24778888888999999999997643
No 375
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.69 E-value=1.8e-16 Score=152.95 Aligned_cols=166 Identities=20% Similarity=0.329 Sum_probs=115.9
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC-----Eecc------CCCCCCceee----cCceEEEccCCCC
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG-----KPIS------QAPPNPRRKV----GPNRITIENLRKS 190 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g-----~~~~------~~~~~~~~~~----~~~~L~i~~v~~~ 190 (745)
..+...|....+.+|++++|.|.+.+.|.+.+.|+|+. ..+. ......++.. ....|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 34556677888999999999999999888999999953 1110 0011122221 1237999999999
Q ss_pred CCEEEEEEEEeCCceEE-EEEEEEEeec------------------CCeeeeCCCceEEecCceEEEEEEEeecC--CCe
Q psy11701 191 DTGNYGCNATNSLGYVY-KDVYVNVLAH------------------APEITEAPKDEYTVDGKTVVLTCRVFGAP--KPE 249 (745)
Q Consensus 191 d~G~Y~C~~~~~~g~~~-~~~~l~v~~~------------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p--~~~ 249 (745)
|+|.|+|.+.|..+... ....|.|... ++.+...+....+.+|++++|.|.+.+.+ .+.
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSW 164 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSE
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCE
Confidence 99999999998755432 2245666531 23344556667889999999999998876 678
Q ss_pred EEEeeC--CEEc------------------cCceEEEeecC-----cEEEcccCCCCCEEEEEEEEe
Q psy11701 250 VNWIHN--QKEL------------------TGGRYTILETG-----DLKITDVAFADSGEYTCFARN 291 (745)
Q Consensus 250 i~W~~~--~~~~------------------~~~~~~~~~~~-----~l~i~~~~~~d~G~Y~C~~~n 291 (745)
+.|+++ +..+ ...++....++ +|.|.+++.+|+|.|.|.+.+
T Consensus 165 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 165 MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 999986 3222 11345444332 599999999999999999986
No 376
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.69 E-value=1.2e-16 Score=156.41 Aligned_cols=168 Identities=19% Similarity=0.254 Sum_probs=118.3
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCE-----eccC------CCCCCceee----cCceEEEccCCC
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK-----PISQ------APPNPRRKV----GPNRITIENLRK 189 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~-----~~~~------~~~~~~~~~----~~~~L~i~~v~~ 189 (745)
.+.+...|....+.+|++++|.|.+.+.|.+.+.|+|++. .+.. .....++.. ....|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4456667888889999999999999998888999998542 1110 011223322 123899999999
Q ss_pred CCCEEEEEEEEeCCce-EEEEEEEEEeec-------------CCeeeeCCCceEEecCceEEEEEEEeecC--CCeEEEe
Q psy11701 190 SDTGNYGCNATNSLGY-VYKDVYVNVLAH-------------APEITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI 253 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g~-~~~~~~l~v~~~-------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p--~~~i~W~ 253 (745)
+|+|.|+|.+.|..+. ......|.|... ++.+...|....+.+|++++|.|.+.+.+ .+.+.|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 9999999999987543 122245555532 12233445677889999999999999876 4789999
Q ss_pred eCC--EEc------------------cCceEEEeec-----CcEEEcccCCCCCEEEEEEEEeC
Q psy11701 254 HNQ--KEL------------------TGGRYTILET-----GDLKITDVAFADSGEYTCFARNK 292 (745)
Q Consensus 254 ~~~--~~~------------------~~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~n~ 292 (745)
+++ ..+ ...++....+ ..|.|.+++.+|+|.|.|.+.|.
T Consensus 172 k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 172 RQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 953 111 1235555433 27999999999999999999997
No 377
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.69 E-value=4.1e-17 Score=159.44 Aligned_cols=194 Identities=18% Similarity=0.315 Sum_probs=111.0
Q ss_pred CCCCCCEEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEec-----
Q psy11701 94 VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPI----- 166 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~----- 166 (745)
.+++|.+.|.|.+.+..|... ... ...+...|....+.+|++++|.|.+.+ +.+.+.|+|. +...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~-~~~------~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSG-GGG------GMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp --------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEE
T ss_pred chhhhHHHHHHHHhccCCccc-ccc------ceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEE
Confidence 357899999999988765433 222 233455567788999999999999876 6779999982 2110
Q ss_pred -------cCCCCCC-ceee-----cCceEEEccCCCCCCEEEEEEEEeCCc----eEEEEEEEEEee-----cCCeee-e
Q psy11701 167 -------SQAPPNP-RRKV-----GPNRITIENLRKSDTGNYGCNATNSLG----YVYKDVYVNVLA-----HAPEIT-E 223 (745)
Q Consensus 167 -------~~~~~~~-~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~~~~g----~~~~~~~l~v~~-----~~p~~~-~ 223 (745)
....... ++.. .+..|.|.+++.+|+|.|.|.+.+... .......|.|.. .+|.+. .
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 0000000 2211 245899999999999999999986421 222334566653 134433 3
Q ss_pred CCCceEEecCceEEEEEEEee-cCCC-eEEEeeCCEEccCceEEEe---------ec------CcEEEcccCCCC-CEEE
Q psy11701 224 APKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQKELTGGRYTIL---------ET------GDLKITDVAFAD-SGEY 285 (745)
Q Consensus 224 ~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~~~~~---------~~------~~l~i~~~~~~d-~G~Y 285 (745)
.+....+..|+.++|.|.+.+ .|.+ .+.|++++..+........ .+ ..|.|.....+| .|.|
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~Y 234 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 234 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEE
T ss_pred CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeE
Confidence 334444556999999999988 5655 7999999988754322110 12 246777777677 9999
Q ss_pred EEEEEeCCce
Q psy11701 286 TCFARNKLGT 295 (745)
Q Consensus 286 ~C~~~n~~g~ 295 (745)
+|.+.|....
T Consensus 235 tC~v~~~~l~ 244 (270)
T 3qib_D 235 RCQVQFYGLS 244 (270)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEecCCC
Confidence 9999987543
No 378
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.69 E-value=1.3e-15 Score=138.43 Aligned_cols=153 Identities=16% Similarity=0.265 Sum_probs=111.8
Q ss_pred eEeeCCCeEEEEEEEeecCCC--eEEEEeCCEeccCCCCCCceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 135 INAAEEETVTFECKASGLPEP--EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212 (745)
Q Consensus 135 ~~v~~G~~~~l~C~~~~~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l 212 (745)
..+..|++++|.|.+ +.|.+ .|+|++.+..+. ..........|.|.+++.+|+|.|.|.+.|..+.....+.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSLG----AVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTC----CEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccccC----cEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEE
Confidence 588999999999999 87777 999999554331 11112335689999999999999999999998888888999
Q ss_pred EEeecCCeeeeCCCceEEecCceEEEEEEEeec-CC----CeEEEeeCCEEccCceE---EE------e---ecC-----
Q psy11701 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK----PEVNWIHNQKELTGGRY---TI------L---ETG----- 270 (745)
Q Consensus 213 ~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~----~~i~W~~~~~~~~~~~~---~~------~---~~~----- 270 (745)
.|...|-.+...+. .+..|+.. |.|.+.+. |. +.|.|++++..+....+ .. . ...
T Consensus 92 tV~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vt 168 (210)
T 1gsm_A 92 LVYAFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVT 168 (210)
T ss_dssp EEEBCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEE
T ss_pred EEEecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEE
Confidence 99864433443443 56678888 99999986 64 37999999999865432 11 0 111
Q ss_pred -cEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 271 -DLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 271 -~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
+|.+.....+|.+.|+|.|.+....
T Consensus 169 s~~~~~~~~~D~~~~~tC~a~~~L~~ 194 (210)
T 1gsm_A 169 ERWRLPPLGTPVPPALYCQATMRLPG 194 (210)
T ss_dssp EEEECCCCCSSCCSEEEEEEEEEETT
T ss_pred EEEeecCCcccCCceEEEEEEeeCCC
Confidence 2334466667778999999876543
No 379
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.69 E-value=5e-16 Score=150.50 Aligned_cols=177 Identities=17% Similarity=0.267 Sum_probs=119.8
Q ss_pred ecCceeEeeCCCeEEEEEEEeec--CCCeEEEEeCC--E---ec----------cCCCCCCceeec------CceEEEcc
Q psy11701 130 VEPEFINAAEEETVTFECKASGL--PEPEIHWVHNG--K---PI----------SQAPPNPRRKVG------PNRITIEN 186 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~g--~---~~----------~~~~~~~~~~~~------~~~L~i~~ 186 (745)
..|....+.+|++++|.|.+.+. +.+.+.|+|.. . .+ .......++... ...|.|.+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 34556678999999999999884 46799999832 1 11 001112233221 23799999
Q ss_pred CCCCCCEEEEEEEEeCC----ceEEEEEEEEEeec-------------CCeeeeCCCceEEecCceEEEEEEEeecCCC-
Q psy11701 187 LRKSDTGNYGCNATNSL----GYVYKDVYVNVLAH-------------APEITEAPKDEYTVDGKTVVLTCRVFGAPKP- 248 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~----g~~~~~~~l~v~~~-------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~- 248 (745)
++.+|+|.|+|.+.|.. ........|.|... ++.+...+....+.+|++++|.|.+.+.+.+
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 172 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS 172 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce
Confidence 99999999999999862 22223456777643 3566777777889999999999999988777
Q ss_pred eEEEeeC--CEEcc-------------CceEEEeec---CcEEEcccCCCCCEEEEEEEEeCCceE-EEEEEEEEee
Q psy11701 249 EVNWIHN--QKELT-------------GGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTA-QGSGSLTVKE 306 (745)
Q Consensus 249 ~i~W~~~--~~~~~-------------~~~~~~~~~---~~l~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~ 306 (745)
.+.|++. +..+. ..++..... .+|.|.+++.+|+|.|.|.+.+..... .....|.|..
T Consensus 173 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~ 249 (257)
T 3gkz_A 173 HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKR 249 (257)
T ss_dssp GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 8999983 22111 134433322 259999999999999999998654322 2334555554
No 380
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.69 E-value=2.2e-16 Score=154.88 Aligned_cols=173 Identities=15% Similarity=0.211 Sum_probs=119.4
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Eec--------------C---CCCCeEecc---CCcEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPI--------------N---PSDRISQGN---YGKSLI 90 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i--------------~---~~~~~~~~~---~~~~L~ 90 (745)
...+...|..+.+.+|++++|.|.+.+.+.+.+.|+|++ ..+ . ...|+.+.. ...+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 344567788899999999999999988888899999853 111 0 124555432 234899
Q ss_pred EccCCCCCCEEEEEEEEeCCe-----eeEEEEEEEEEEe------cCeEEec-CceeEeeCCCeEEEEEEEeec-CC-Ce
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVG-----EAKSYSIDLSVLA------APYFTVE-PEFINAAEEETVTFECKASGL-PE-PE 156 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g-----~~~~~~~~l~V~~------~p~~~~~-~~~~~v~~G~~~~l~C~~~~~-p~-~~ 156 (745)
|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+... +....+.+|+.++|.|.+.+. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998421 1112234667764 5655443 344445679999999999985 54 69
Q ss_pred EEEEeCCEeccCCCCCC------------ceeecCceEEEccCCCCC-CEEEEEEEEeCCce
Q psy11701 157 IHWVHNGKPISQAPPNP------------RRKVGPNRITIENLRKSD-TGNYGCNATNSLGY 205 (745)
Q Consensus 157 v~W~~~g~~~~~~~~~~------------~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~g~ 205 (745)
++|++||+.+....... ......+.|.|.+....| .|.|+|.|.|....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 99999999886432110 001112347887777754 77899999997643
No 381
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.69 E-value=6.4e-17 Score=155.26 Aligned_cols=169 Identities=14% Similarity=0.181 Sum_probs=103.0
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Eec------C-----------CCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPI------N-----------PSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i------~-----------~~~~~~~~~----~~~~L~ 90 (745)
.+.+|....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+ . ...|+.+.. ...+|.
T Consensus 3 ~l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (257)
T 3bn9_D 3 QLVQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQ 82 (257)
T ss_dssp EEEEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEEccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEE
Confidence 34566778899999999999998765 5789999842 211 0 124555432 234899
Q ss_pred EccCCCCCCEEEEEEEEeCCe----------e--eEEEEEEEEEEe----cCeEEecCceeEeeCCCeEEEEEEEeec-C
Q psy11701 91 IKHVEFSDQGSYTCEVSNGVG----------E--AKSYSIDLSVLA----APYFTVEPEFINAAEEETVTFECKASGL-P 153 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~g----------~--~~~~~~~l~V~~----~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p 153 (745)
|.+++.+|+|.|.|.+.+..| . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P 162 (257)
T 3bn9_D 83 MSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 162 (257)
T ss_dssp EESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBS
T ss_pred ECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEEC
Confidence 999999999999999998654 1 112335677764 4655544333346789999999999885 7
Q ss_pred CC-eEEEEeCCEeccCCCCCCceee------cCceEEEccCCCCCCEEEEEEEEeCCceE
Q psy11701 154 EP-EIHWVHNGKPISQAPPNPRRKV------GPNRITIENLRKSDTGNYGCNATNSLGYV 206 (745)
Q Consensus 154 ~~-~v~W~~~g~~~~~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~ 206 (745)
.+ .+.|++++..+... ....... ..+.|.|.++..+| |.|+|.|.|.....
T Consensus 163 ~pi~v~W~k~g~~~~~~-~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 163 EPVTVSWNSGALTSGVH-TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp SCCEEEETTTTCCSSCE-ECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred CCcEEEEeeCCCcCCcE-ecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 76 99999998764321 1111111 12357888888778 99999999976543
No 382
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.69 E-value=1.2e-16 Score=153.20 Aligned_cols=165 Identities=19% Similarity=0.302 Sum_probs=117.7
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecC----CCeEEEEeCC--Eec---cC------CCCCCceee----cCceEEEccC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLP----EPEIHWVHNG--KPI---SQ------APPNPRRKV----GPNRITIENL 187 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p----~~~v~W~~~g--~~~---~~------~~~~~~~~~----~~~~L~i~~v 187 (745)
.+...|....+.+|++++|.|.+.+.| .+.+.|+|++ ..+ .. .....++.. ....|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 345667788899999999999999887 6799999952 211 10 001122222 1237999999
Q ss_pred CCCCCEEEEEEEEeCCce-EEEEEEEEEeec-----CCeeeeCCCceEEecCceEEEEEEEeecCC--CeEEEeeC--CE
Q psy11701 188 RKSDTGNYGCNATNSLGY-VYKDVYVNVLAH-----APEITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHN--QK 257 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~-~~~~~~l~v~~~-----~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~--~~i~W~~~--~~ 257 (745)
+.+|+|.|+|.+.|..+. ....+.|.|... ++.+...+....+.+|++++|.|.+.+.|. +.+.|+++ +.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 999999999999987654 233456777643 223445567778999999999999998864 58999995 22
Q ss_pred Ec------------------cCceEEEeec-----CcEEEcccCCCCCEEEEEEEEe
Q psy11701 258 EL------------------TGGRYTILET-----GDLKITDVAFADSGEYTCFARN 291 (745)
Q Consensus 258 ~~------------------~~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~n 291 (745)
.+ ...++....+ ..|.|.+++.+|+|.|.|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 11 1234544332 3699999999999999999984
No 383
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.69 E-value=1.2e-16 Score=151.00 Aligned_cols=169 Identities=13% Similarity=0.215 Sum_probs=115.1
Q ss_pred eEeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Eec------C-------------CCCCeEecc----CCcE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VPI------N-------------PSDRISQGN----YGKS 88 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~i------~-------------~~~~~~~~~----~~~~ 88 (745)
.+..|..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. ..+ . ...|+.+.. ...+
T Consensus 3 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 82 (221)
T 3m8o_H 3 QLVESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAF 82 (221)
T ss_dssp EEEEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEE
T ss_pred eEEccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEE
Confidence 34566778899999999999998743 5689999732 111 0 124555432 2237
Q ss_pred EEEccCCCCCCEEEEEEEEeCCe-eeEEEEEEEEEE----ecCeEE-ecCceeEeeCCCeEEEEEEEee-cCC--CeEEE
Q psy11701 89 LIIKHVEFSDQGSYTCEVSNGVG-EAKSYSIDLSVL----AAPYFT-VEPEFINAAEEETVTFECKASG-LPE--PEIHW 159 (745)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~g-~~~~~~~~l~V~----~~p~~~-~~~~~~~v~~G~~~~l~C~~~~-~p~--~~v~W 159 (745)
|.|.+++.+|+|.|.|.+.+... ........|.|. .+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W 160 (221)
T 3m8o_H 83 LQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTW 160 (221)
T ss_dssp EEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEE
T ss_pred EEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEE
Confidence 99999999999999999987531 112233456664 345554 233333 78999999999988 676 49999
Q ss_pred EeCCEeccCCCCC------CceeecCceEEEccCCCCCCEEEEEEEEeCCceE
Q psy11701 160 VHNGKPISQAPPN------PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206 (745)
Q Consensus 160 ~~~g~~~~~~~~~------~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~ 206 (745)
+++|..+...... .......+.|.|..+..+|+|.|+|.|.+..+..
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 161 SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp SCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 9999776321111 0111112469999999999999999999987543
No 384
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=1.9e-16 Score=152.42 Aligned_cols=169 Identities=17% Similarity=0.323 Sum_probs=118.9
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe----------------CCEeccCCCCCCceee-----cCceEEEc
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH----------------NGKPISQAPPNPRRKV-----GPNRITIE 185 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~----------------~g~~~~~~~~~~~~~~-----~~~~L~i~ 185 (745)
.+...|....+.+|++++|.|.+.+.+.+.+.|+| ++..........++.. ....|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 35566778889999999999999998889999999 3333322222223322 23479999
Q ss_pred cCCCCCCEEEEEEEEeCCc----eEEEEEEEEEee-----cCCeee-eCCCceEEecCceEEEEEEEeecCCC--eEEEe
Q psy11701 186 NLRKSDTGNYGCNATNSLG----YVYKDVYVNVLA-----HAPEIT-EAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWI 253 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g----~~~~~~~l~v~~-----~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~p~~--~i~W~ 253 (745)
+++.+|+|.|+|.+.+..+ .......|.|.. .+|.+. ..+....+.+|+.++|.|.+.+.+++ .+.|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 9999999999999987643 122334566653 345543 34445556679999999999987654 89999
Q ss_pred eCCEEccCceEEEe---------ecC------cEEEcccCCCC-CEEEEEEEEeCCce
Q psy11701 254 HNQKELTGGRYTIL---------ETG------DLKITDVAFAD-SGEYTCFARNKLGT 295 (745)
Q Consensus 254 ~~~~~~~~~~~~~~---------~~~------~l~i~~~~~~d-~G~Y~C~~~n~~g~ 295 (745)
+++..+........ .++ .|.|.....+| .|.|+|.|.|....
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 99988764322211 122 37888887778 99999999987544
No 385
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.69 E-value=2.2e-16 Score=152.65 Aligned_cols=179 Identities=20% Similarity=0.288 Sum_probs=123.4
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Ee---ccCC-------CCCCceee------cCceEEEccCC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KP---ISQA-------PPNPRRKV------GPNRITIENLR 188 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~---~~~~-------~~~~~~~~------~~~~L~i~~v~ 188 (745)
.+...|....+.+|++++|.|.+.+.|.+.+.|+|.. .. +... ....++.. ....|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 4556677889999999999999999899999999832 11 1000 00112221 23479999999
Q ss_pred CCCCEEEEEEEEeCCce----EEEEEEEEEee-------------------cCCeeeeCCCceEEecCceEEEEEEEeec
Q psy11701 189 KSDTGNYGCNATNSLGY----VYKDVYVNVLA-------------------HAPEITEAPKDEYTVDGKTVVLTCRVFGA 245 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~----~~~~~~l~v~~-------------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~ 245 (745)
.+|+|.|+|.+.+..+. ......|.|.. .+|.+...|....+.+|++++|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 99999999999987541 12234566654 35677788888889999999999999876
Q ss_pred CCCeEEEeeCC--EEc---c-------------CceEEEe----ecCcEEEcccCCCCCEEEEEEEEeCCceEE--EEEE
Q psy11701 246 PKPEVNWIHNQ--KEL---T-------------GGRYTIL----ETGDLKITDVAFADSGEYTCFARNKLGTAQ--GSGS 301 (745)
Q Consensus 246 p~~~i~W~~~~--~~~---~-------------~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~--~~~~ 301 (745)
.+.+.|++.. ..+ . ..++... ...+|.|.+++.+|+|.|+|.|.|..|... ....
T Consensus 165 -~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~ 243 (256)
T 3tf7_C 165 -HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSK 243 (256)
T ss_dssp -CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEE
T ss_pred -ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeE
Confidence 6789999832 111 0 1222221 123699999999999999999998766532 2344
Q ss_pred EEEee
Q psy11701 302 LTVKE 306 (745)
Q Consensus 302 l~v~~ 306 (745)
|.|..
T Consensus 244 l~v~~ 248 (256)
T 3tf7_C 244 LTVLE 248 (256)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 55543
No 386
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.68 E-value=6.5e-16 Score=139.21 Aligned_cols=155 Identities=18% Similarity=0.232 Sum_probs=112.0
Q ss_pred ceeEeeCCCeEEEEEEEe--ecCCCeEEEEe--CCEeccCC-------CCCCce-eecCceEEEccCCCCCCEEEEEEEE
Q psy11701 133 EFINAAEEETVTFECKAS--GLPEPEIHWVH--NGKPISQA-------PPNPRR-KVGPNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~--~~p~~~v~W~~--~g~~~~~~-------~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
......+|++++|.|... +.+.+.|.|+| ++..+... ....+. ...+++|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEE
Confidence 445678999999999542 34567999999 88776210 012233 2356799999999999999999999
Q ss_pred eCCceEE--EEEEEEEeec--CCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcc
Q psy11701 201 NSLGYVY--KDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITD 276 (745)
Q Consensus 201 ~~~g~~~--~~~~l~v~~~--~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~ 276 (745)
|..|... ..+.|.|... .|.+.. .+..++|.|.+.+.|.+.+.|++++..+. . ....|.+..
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l~-~-----~~~~i~~~~ 152 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHLK-L-----SQRVITHKW 152 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEEE-E-----ESSCEEEEC
T ss_pred eCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEECC-C-----CCcEEEEec
Confidence 9887654 3566777642 233322 34479999999988888999999998771 1 233454433
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 277 VAFADSGEYTCFARNKLGTAQGSGSL 302 (745)
Q Consensus 277 ~~~~d~G~Y~C~~~n~~g~~~~~~~l 302 (745)
...|+|.|+|.|.|..+.......+
T Consensus 153 -~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 153 -TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp -CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred -ccCCCcEEEEEEEeCCCCcEEccee
Confidence 4689999999999999987766554
No 387
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.68 E-value=5.3e-16 Score=145.79 Aligned_cols=182 Identities=20% Similarity=0.275 Sum_probs=135.8
Q ss_pred eecCCeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCc---eEEEee---cCcEEEcccCCCCCEEEEEE
Q psy11701 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE---TGDLKITDVAFADSGEYTCF 288 (745)
Q Consensus 215 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~---~~~~~~---~~~l~i~~~~~~d~G~Y~C~ 288 (745)
...+|.| ..|....+.+|+.++|.|.+.+.|.+.+.|++++..+... ++.+.. .+.|.|.++...|.|.|+|.
T Consensus 16 ~~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 16 HMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp CCEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEE
T ss_pred eecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEE
Confidence 3346677 4666788999999999999999999999999999988643 344432 35799999999999999999
Q ss_pred EEeCCceEEEEEEEEEeecceeecCCCcEEE-ecCCeEEEEEEEEe----cCCCCcEEEEeeCCeeccCCCCCeEEEc--
Q psy11701 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEV-EAGQSATFRCNAVS----DPSLKLSIVWLRGSEPIDFESEPRFVQS-- 361 (745)
Q Consensus 289 ~~n~~g~~~~~~~l~v~~~p~~~~~p~~~~~-~~g~~~~l~C~~~~----~~~~~~~i~W~~~~~~~~~~~~~~~~~~-- 361 (745)
|.|..|.....+.|.|..+|.. |....+ ..+..+.|.|.... .+...+.+.|.+++..... .......
T Consensus 95 a~n~~g~~~~~~~l~v~~~P~~---p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~--~~~~~~~~~ 169 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQADTPSS---PSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWH--SKWYDAKEA 169 (215)
T ss_dssp EECSSCEEEEEEEEEECCCCCC---CEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCE--EEEEEHHHH
T ss_pred EEECCCceEEEEEEEECCCCCC---CcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccc--ccccccccc
Confidence 9999999988899998876643 333322 45678899997432 2332356889887754221 0111111
Q ss_pred -CCeEEEEecCCCCCCEEEEEEEEeCCceEEEEEEEEEeccC
Q psy11701 362 -NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402 (745)
Q Consensus 362 -~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~l~v~~pp 402 (745)
....+.|.++...+.|.|+|.|.|..|.+..+..+.++.+|
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 12679999999999999999999999988777777777665
No 388
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.68 E-value=3e-16 Score=150.19 Aligned_cols=171 Identities=18% Similarity=0.288 Sum_probs=119.9
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Eec---c------CCCCCCceee----cCceEEEccCCC
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KPI---S------QAPPNPRRKV----GPNRITIENLRK 189 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~~---~------~~~~~~~~~~----~~~~L~i~~v~~ 189 (745)
.+.+...|....+.+|++++|.|.+.+.+.+.+.|+|++ ... . ......++.. .+..|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 344566678889999999999999998888899999842 110 0 0011122222 345799999999
Q ss_pred CCCEEEEEEEEeCCceEE-EEEEEEE--eecCCeeeeCCCceEEecCceEEEEEEEeec-C-CCeEEEeeCCEEccCceE
Q psy11701 190 SDTGNYGCNATNSLGYVY-KDVYVNV--LAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-P-KPEVNWIHNQKELTGGRY 264 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g~~~-~~~~l~v--~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~~ 264 (745)
+|+|.|+|.+.+..+... ....+.| ...+|.+...+....+..|+.++|.|.+.+. | .+.+.|++++..+..+..
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ 183 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCcee
Confidence 999999999988765322 2234444 2346666655555555568899999999884 4 479999999988764320
Q ss_pred ---EE--------eecCcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 265 ---TI--------LETGDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 265 ---~~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.. .....|.|.....+|.|.|+|.|.|....
T Consensus 184 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 184 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 00 11234888889889999999999998654
No 389
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.68 E-value=5.1e-16 Score=146.93 Aligned_cols=179 Identities=18% Similarity=0.251 Sum_probs=116.8
Q ss_pred ecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc------C--------CCCCCceee------cCceEEEc
Q psy11701 130 VEPEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS------Q--------APPNPRRKV------GPNRITIE 185 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~------~--------~~~~~~~~~------~~~~L~i~ 185 (745)
..|....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. . .....++.. ....|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 346677899999999999998866 5799999853 2110 0 001223322 23589999
Q ss_pred cCCCCCCEEEEEEEEeCCceE-EEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCEEc
Q psy11701 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKEL 259 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~~-~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 259 (745)
+++.+|+|.|.|.+.+..+.. .....|.|.. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++++..+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 999999999999999864322 1235677764 24555433323346689999999999986 666 99999988754
Q ss_pred c---CceEE----EeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecce
Q psy11701 260 T---GGRYT----ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309 (745)
Q Consensus 260 ~---~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p~ 309 (745)
. ..... ....+.|.|..+..+| |.|+|.|.|..+.......+.+..+|.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~ 220 (227)
T 1mju_H 165 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTI 220 (227)
T ss_dssp TEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC--
T ss_pred CcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCC
Confidence 2 11110 1123468999988877 999999999877766666666666553
No 390
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=2.3e-17 Score=154.82 Aligned_cols=164 Identities=21% Similarity=0.311 Sum_probs=116.5
Q ss_pred CceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEecc---------CCCCCCceee----cCceEEEccCCCCCCEEEE
Q psy11701 132 PEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPIS---------QAPPNPRRKV----GPNRITIENLRKSDTGNYG 196 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~---------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~ 196 (745)
|....+.+|++++|.|.+.+.|.+.+.|+|+ |..+. ......++.. ....|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 7788899999999999998877778999984 33221 0011123222 2348999999999999999
Q ss_pred EEEEeC-CceE--EEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CC-CeEEEeeCCEEccCceEE---
Q psy11701 197 CNATNS-LGYV--YKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK-PEVNWIHNQKELTGGRYT--- 265 (745)
Q Consensus 197 C~~~~~-~g~~--~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~--- 265 (745)
|.+.|. .+.. .....+.|.. .+|.+...+....+.+|+.++|.|.+.+. |. +.+.|++++..+......
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 999973 2221 1224555532 45667665555555679999999999987 54 699999999887533110
Q ss_pred ------EeecCcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 266 ------ILETGDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 266 ------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
....+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 111245889999999999999999998765
No 391
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=8.4e-16 Score=150.88 Aligned_cols=177 Identities=19% Similarity=0.354 Sum_probs=122.4
Q ss_pred EecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc--------------CCCCCCceee------cCceEEE
Q psy11701 129 TVEPEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS--------------QAPPNPRRKV------GPNRITI 184 (745)
Q Consensus 129 ~~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~--------------~~~~~~~~~~------~~~~L~i 184 (745)
...|....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. ......++.. ....|.|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 3456677899999999999998865 5799999953 1110 0001123322 1257999
Q ss_pred ccCCCCCCEEEEEEEEeCCc---eEE--EEEEEEEeec--------------CCeeeeCCCceEEecCceEEEEEEEeec
Q psy11701 185 ENLRKSDTGNYGCNATNSLG---YVY--KDVYVNVLAH--------------APEITEAPKDEYTVDGKTVVLTCRVFGA 245 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g---~~~--~~~~l~v~~~--------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~ 245 (745)
.+++.+|+|.|+|.+.|..| ... ..+.|.|... ++.+...|....+.+|++++|.|.+.+.
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 189 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSS 189 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCC
Confidence 99999999999999999865 111 2346666643 2445566777789999999999999998
Q ss_pred CCCeEEEee--CCEEcc-------------CceEEEee---cCcEEEcccCCCCCEEEEEEEEeCCce-EEEEEEEEEee
Q psy11701 246 PKPEVNWIH--NQKELT-------------GGRYTILE---TGDLKITDVAFADSGEYTCFARNKLGT-AQGSGSLTVKE 306 (745)
Q Consensus 246 p~~~i~W~~--~~~~~~-------------~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~ 306 (745)
+ +.+.|++ ++..+. ..++.... ..+|.|.+++.+|+|.|.|.+.+.... ......|.|..
T Consensus 190 ~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 190 V-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp C-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred C-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 8 8999999 554331 23444332 236999999999999999999875332 22345566643
No 392
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.67 E-value=5.4e-16 Score=145.90 Aligned_cols=164 Identities=16% Similarity=0.276 Sum_probs=113.2
Q ss_pred CceeEeeCCCeEEEEEEE-eecC-CCeEEEEeCC--Eecc---------CCCCCCceee----cCceEEEccCCCCCCEE
Q psy11701 132 PEFINAAEEETVTFECKA-SGLP-EPEIHWVHNG--KPIS---------QAPPNPRRKV----GPNRITIENLRKSDTGN 194 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~-~~~p-~~~v~W~~~g--~~~~---------~~~~~~~~~~----~~~~L~i~~v~~~d~G~ 194 (745)
|....+.+|++++|.|.+ .+.+ .+.+.|+|++ ..+. ......++.. ....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 677889999999999995 4432 5799999953 2210 0111123322 23479999999999999
Q ss_pred EEEEEEeCCc-e-EEEEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCEEccCc-eEEE-
Q psy11701 195 YGCNATNSLG-Y-VYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKELTGG-RYTI- 266 (745)
Q Consensus 195 Y~C~~~~~~g-~-~~~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~-~~~~- 266 (745)
|+|.+.|..+ . ......|.|.. .+|.+...+.......|+.++|.|.+.+. |.+ .+.|++++..+... ....
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 9999999876 1 22234555542 35666654433333468999999999984 554 89999999987655 1111
Q ss_pred -e--ec------CcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 267 -L--ET------GDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 267 -~--~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
. .+ ..|.|..+..+|+|.|+|.|.|....
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 1 11 25889999999999999999997644
No 393
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.67 E-value=2.5e-16 Score=153.82 Aligned_cols=171 Identities=22% Similarity=0.278 Sum_probs=117.2
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEec------------CCC---C-CeEecc---CCcEEEE
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPI------------NPS---D-RISQGN---YGKSLII 91 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i------------~~~---~-~~~~~~---~~~~L~i 91 (745)
...+...|..+.+.+|++++|.|.+.+ +.+.+.|+|. +..+ ... + |+.+.. ...+|.|
T Consensus 27 ~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 105 (270)
T 3qib_D 27 GMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEI 105 (270)
T ss_dssp -CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEE
T ss_pred ceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEE
Confidence 445667788899999999999999865 6779999982 2111 000 0 444322 2458999
Q ss_pred ccCCCCCCEEEEEEEEeCC---eeeEEEEEEEEEEe------cCeEEe-cCceeEeeCCCeEEEEEEEee-cCCC-eEEE
Q psy11701 92 KHVEFSDQGSYTCEVSNGV---GEAKSYSIDLSVLA------APYFTV-EPEFINAAEEETVTFECKASG-LPEP-EIHW 159 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~---g~~~~~~~~l~V~~------~p~~~~-~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W 159 (745)
.+++.+|+|.|+|.+.+.. .......+.|.|.. +|.+.. .+....+.+|+.++|.|.+.+ .|.+ .+.|
T Consensus 106 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 185 (270)
T 3qib_D 106 QSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 185 (270)
T ss_dssp SSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEE
Confidence 9999999999999998632 11222335677765 565443 344445667999999999988 6666 8999
Q ss_pred EeCCEeccCCCCC------------CceeecCceEEEccCCCCC-CEEEEEEEEeCCc
Q psy11701 160 VHNGKPISQAPPN------------PRRKVGPNRITIENLRKSD-TGNYGCNATNSLG 204 (745)
Q Consensus 160 ~~~g~~~~~~~~~------------~~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~g 204 (745)
+|+|..+...... .........|.|.....+| +|.|+|.|.|...
T Consensus 186 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 186 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 243 (270)
T ss_dssp EETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCB
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCC
Confidence 9999988642211 0111112457888887777 9999999998754
No 394
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.67 E-value=5.6e-16 Score=149.18 Aligned_cols=166 Identities=16% Similarity=0.311 Sum_probs=114.5
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecC-----CCeEEEEeCC--Ee---ccC------CCCCCceee----cCceEEEcc
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLP-----EPEIHWVHNG--KP---ISQ------APPNPRRKV----GPNRITIEN 186 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p-----~~~v~W~~~g--~~---~~~------~~~~~~~~~----~~~~L~i~~ 186 (745)
.+...|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. +.. .....++.. ....|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 345567888899999999999998877 6899999842 21 110 001123222 234799999
Q ss_pred CCCCCCEEEEEEEEeCCceEE-EEEEEEEeec------------CCeeeeCCCceEEecCceEEEEEEEeecC--CCeEE
Q psy11701 187 LRKSDTGNYGCNATNSLGYVY-KDVYVNVLAH------------APEITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVN 251 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v~~~------------~p~~~~~~~~~~v~~g~~~~l~C~~~~~p--~~~i~ 251 (745)
++.+|+|.|+|.+.|..+... ..+.|.|... ++.....+....+.+|++++|.|.+.+.+ .+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 999999999999998755322 2356666542 22233334445688999999999998875 46899
Q ss_pred EeeCC--EEc------------------cCceEEEee-----cCcEEEcccCCCCCEEEEEEEEeC
Q psy11701 252 WIHNQ--KEL------------------TGGRYTILE-----TGDLKITDVAFADSGEYTCFARNK 292 (745)
Q Consensus 252 W~~~~--~~~------------------~~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~~~n~ 292 (745)
|++++ ..+ ...++.... ...|.|.+++.+|+|.|.|.+.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99853 111 134554432 137999999999999999999985
No 395
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.67 E-value=4.6e-16 Score=150.88 Aligned_cols=167 Identities=19% Similarity=0.266 Sum_probs=108.6
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEe---ccC-----------CCCC-Cce-----eecCceE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKP---ISQ-----------APPN-PRR-----KVGPNRI 182 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~---~~~-----------~~~~-~~~-----~~~~~~L 182 (745)
+|.+...|....+.+|++++|.|.+.+.+.+.+.|+|. +.. +.. .... ... ......|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 35566677888999999999999999888889999982 111 100 0000 111 1134579
Q ss_pred EEccCCCCCCEEEEEEEEeCCc---eEEEEEEEEEeec----------------CCeeeeCCCceEEecCceEEEEEEEe
Q psy11701 183 TIENLRKSDTGNYGCNATNSLG---YVYKDVYVNVLAH----------------APEITEAPKDEYTVDGKTVVLTCRVF 243 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~~~~~~g---~~~~~~~l~v~~~----------------~p~~~~~~~~~~v~~g~~~~l~C~~~ 243 (745)
.|.+++.+|+|.|+|.+.+..+ .......|.|... ++.+...+....+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999998765 2223356666643 35677778888999999999999988
Q ss_pred ec-CCCeEEEeeCCE--Ec-------------cCceEEEee-----cCcEEEcccCCCCCEEEEEEEEe
Q psy11701 244 GA-PKPEVNWIHNQK--EL-------------TGGRYTILE-----TGDLKITDVAFADSGEYTCFARN 291 (745)
Q Consensus 244 ~~-p~~~i~W~~~~~--~~-------------~~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~~~n 291 (745)
+. +.+.+.|++... .+ ...++.... ...|.|.+++.+|+|.|.|.+.+
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 75 677999998431 11 123444432 23599999999999999999974
No 396
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.67 E-value=3.4e-16 Score=140.18 Aligned_cols=151 Identities=19% Similarity=0.251 Sum_probs=108.6
Q ss_pred eeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCC---------CCCceee--cCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP---------PNPRRKV--GPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 134 ~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~---------~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
...+.+|++++|.|.+.+ |.+.+.|+|++..+.... ...+... .+++|.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456789999999999854 788999999987543110 1123333 4679999999999999999999988
Q ss_pred CceEEEEEEEEEeecC--CeeeeCCCceEEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCC
Q psy11701 203 LGYVYKDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280 (745)
Q Consensus 203 ~g~~~~~~~l~v~~~~--p~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 280 (745)
.| ...+.|.|...+ |.+.... ...+|.|.+.+.|.+.+.|++++..+... ....|.+. ...
T Consensus 83 ~~--~~~~~L~V~~~~~~p~i~~~~--------~~~~L~C~~~~~p~p~i~W~~~~~~l~~~-----~~~~l~~~--~~~ 145 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKPMIYWEC--------SNATLTCEVLEGTDVELKLYQGKEHLRSL-----RQKTMSYQ--WTN 145 (171)
T ss_dssp CS--CEEEEEEEECCCCCCEEEEET--------TTTEEEEECSSCSSCEEEEEETTEEEEEE-----SSSEEEEE--CSC
T ss_pred CC--cEEEEEEEECcCCCCEEEEec--------CCcEEEEEeCCCCCcEEEEEECCEECcCC-----cceEEEEe--ccC
Confidence 77 556677776422 2332211 11389999998888999999999876521 11234333 367
Q ss_pred CCEEEEEEEEeCCceEEEEEEE
Q psy11701 281 DSGEYTCFARNKLGTAQGSGSL 302 (745)
Q Consensus 281 d~G~Y~C~~~n~~g~~~~~~~l 302 (745)
|.|.|+|.|.|..+..+..+.|
T Consensus 146 ~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 146 LRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp CSSCEEEEEEETTEEEEEEECC
T ss_pred CCceEEEEEEcccCcccceeEE
Confidence 8999999999999887665544
No 397
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.67 E-value=7.2e-16 Score=147.66 Aligned_cols=166 Identities=19% Similarity=0.291 Sum_probs=114.7
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Ee---ccC------CCCCCceee----cCceEEEccCCCCC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KP---ISQ------APPNPRRKV----GPNRITIENLRKSD 191 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~---~~~------~~~~~~~~~----~~~~L~i~~v~~~d 191 (745)
.+...|....+.+|++++|.|.+.+.|.+.+.|+|+. .. +.. .....++.. ....|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 3556678889999999999999999888899999953 11 100 001223322 23479999999999
Q ss_pred CEEEEEEEEeCCceEE-EEEEEEEeecC------------CeeeeCCCceEEecCceEEEEEEEeecC--CCeEEEeeCC
Q psy11701 192 TGNYGCNATNSLGYVY-KDVYVNVLAHA------------PEITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQ 256 (745)
Q Consensus 192 ~G~Y~C~~~~~~g~~~-~~~~l~v~~~~------------p~~~~~~~~~~v~~g~~~~l~C~~~~~p--~~~i~W~~~~ 256 (745)
+|.|.|.+.|..+... ....|.|...+ +.....+....+.+|++++|.|.+.+.+ .+.+.|++++
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 9999999998754322 23466665422 1123333345688999999999998875 4689999842
Q ss_pred --EEc-----------------cCceEEEeec-----CcEEEcccCCCCCEEEEEEEEeC
Q psy11701 257 --KEL-----------------TGGRYTILET-----GDLKITDVAFADSGEYTCFARNK 292 (745)
Q Consensus 257 --~~~-----------------~~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~n~ 292 (745)
..+ ...++....+ .+|.|.+++.+|+|.|.|.|.|.
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 211 1344554322 37999999999999999999873
No 398
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.66 E-value=1.9e-15 Score=136.59 Aligned_cols=154 Identities=17% Similarity=0.212 Sum_probs=109.2
Q ss_pred ceeEeeCCCeEEEEEEEee-cCCCeEEEEeC-CEecc-----------CCCCCCceee--cCceEEEccCCCCCCEEEEE
Q psy11701 133 EFINAAEEETVTFECKASG-LPEPEIHWVHN-GKPIS-----------QAPPNPRRKV--GPNRITIENLRKSDTGNYGC 197 (745)
Q Consensus 133 ~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~-g~~~~-----------~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C 197 (745)
....+.+|++++|.|.+.+ .+.+.|.|+|+ +..+. ......+... .+++|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4567899999999999854 34679999994 33221 0111234443 56789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecCCeeeeCCCceEEecCceEEEEEEE-eecCCCeEEEeeCCEEccCceEEEeecCcEEEcc
Q psy11701 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGRYTILETGDLKITD 276 (745)
Q Consensus 198 ~~~~~~g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~ 276 (745)
.+.+.. .....+.|.|...++. ......+++++|.|.+ .+ |.+.+.|++++..+. .....+|.+..
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~~~~------P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-----~~~~~~l~~~~ 153 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEMVSK------PMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR-----SLRQKTMSYQW 153 (180)
T ss_dssp EEESSS-EEEEEEEEEEECCCCC------CEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE-----EESSSEEEEEC
T ss_pred EEEcCC-eEEEEEEEEEECCCCC------CEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc-----CCCCCEEEEEE
Confidence 998776 5566677888642211 1111245679999999 55 889999999998775 12234566533
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEE
Q psy11701 277 VAFADSGEYTCFARNKLGTAQGSGS 301 (745)
Q Consensus 277 ~~~~d~G~Y~C~~~n~~g~~~~~~~ 301 (745)
.+|+|.|+|.|.|..+.......
T Consensus 154 --~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 154 --TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp --SCCSSCEEEEEEETTEEEEEEEC
T ss_pred --hhcCccEEEEEecCcCcccccee
Confidence 68999999999999987765543
No 399
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.66 E-value=1.6e-16 Score=148.12 Aligned_cols=164 Identities=14% Similarity=0.228 Sum_probs=111.1
Q ss_pred ecCceeE-eeCCCeEEEEEEEeecC---C-CeEEEEeCCEeccCCCCC------CceeecCceEEEccCCCCCCEEEEEE
Q psy11701 130 VEPEFIN-AAEEETVTFECKASGLP---E-PEIHWVHNGKPISQAPPN------PRRKVGPNRITIENLRKSDTGNYGCN 198 (745)
Q Consensus 130 ~~~~~~~-v~~G~~~~l~C~~~~~p---~-~~v~W~~~g~~~~~~~~~------~~~~~~~~~L~i~~v~~~d~G~Y~C~ 198 (745)
..|.... +.+|++++|.|.+.|.+ . ..+.|+|++..+...... .......+.|.|.+++.+|+|.|+|.
T Consensus 7 ~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 86 (207)
T 2vol_A 7 FPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCR 86 (207)
T ss_dssp ECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEE
T ss_pred eCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEE
Confidence 3444444 78999999999999874 3 499999999776532100 01111235799999999999999999
Q ss_pred EEeCCceEE--EEEEE--EEeecCCeeeeCCCceEEecCceEEEEEEEeec-CC-CeEEEeeCCEEccCceE---EEeec
Q psy11701 199 ATNSLGYVY--KDVYV--NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK-PEVNWIHNQKELTGGRY---TILET 269 (745)
Q Consensus 199 ~~~~~g~~~--~~~~l--~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~---~~~~~ 269 (745)
|.|..+... ..+.+ .+ ..+|.+...+.......|+.++|.|.+.+. |. +.+.|++++..+..... ....+
T Consensus 87 a~~~~~~~~~~~~v~~~~~~-~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~ 165 (207)
T 2vol_A 87 VNSAAFPAPIEKTISKTKGR-PKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTD 165 (207)
T ss_dssp EECTTCSSCEEEEECCCCCC-CBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTT
T ss_pred EEccCCCCceEEEeccCCCC-CcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCC
Confidence 999877532 22222 22 246766554443333469999999999985 44 38999999988754321 22333
Q ss_pred Cc------EEEcccCCCCCEEEEEEEEeCCc
Q psy11701 270 GD------LKITDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 270 ~~------l~i~~~~~~d~G~Y~C~~~n~~g 294 (745)
++ |.|.....+|.|.|+|.|.|...
T Consensus 166 g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 166 GSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp SCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 43 45555555689999999999754
No 400
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.66 E-value=3e-15 Score=152.51 Aligned_cols=273 Identities=12% Similarity=0.068 Sum_probs=143.8
Q ss_pred cCCCcEEEe-cC--CeEEEEEEEEec------CCCCcEEEEeeCCeeccCCCCCeEEEcCCeEEEEecCCCCCCEEEEEE
Q psy11701 312 DQPEDYEVE-AG--QSATFRCNAVSD------PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382 (745)
Q Consensus 312 ~~p~~~~~~-~g--~~~~l~C~~~~~------~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~ 382 (745)
.+|.++.+. .+ ..+.|+|..... ....+.+.|...+.. ......... +.....+.....+.+++.
T Consensus 33 ~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~----~w~~~~~~~--~~~~~~~~l~~~y~~rV~ 106 (380)
T 3lb6_C 33 NPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSE----TWKTIITKN--LHYKDGFDLNKGIEAXIH 106 (380)
T ss_dssp CCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCS----SCEEEEESS--SEEEEECCTTSCEEEEEE
T ss_pred CcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCC----cceEEEecc--EEEEEeecCCCceEEEEE
Confidence 556667775 34 568999977543 133456777665411 111111111 123334455678899999
Q ss_pred EEeC----CceEE---EEEEEEE----eccCCCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCC-
Q psy11701 383 AQTE----LDFIE---AQATLTV----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG- 450 (745)
Q Consensus 383 a~n~----~g~~~---~~~~l~v----~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~- 450 (745)
|.|. .|.+. ....... ..|+.+|+++.+.. .+...+.++|+++... +...+|.+.|+..+....
T Consensus 107 a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~-~~~~~l~csW~p~~~~---~~~~~Y~l~y~~~~~~~~~ 182 (380)
T 3lb6_C 107 TLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVY-YNWQYLLCSWKPGIGV---LLDTNYNLFYWYEGLDHAL 182 (380)
T ss_dssp EECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEE-ETTTEEEEEEECC---------CCEEEEEECTTCSSCE
T ss_pred eecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEE-CCCcEEEEEEcCCCCC---CCCccEEEEEEECCCCccc
Confidence 9853 33322 1222221 35677889999987 7889999999986432 456789999987654221
Q ss_pred ceeEEEEccCceeEEEec--ccccCcceeEEEEEecCCCCCCCCcceEEeCCC-CCCCCCCceeEEEcCCceEEEEeeCC
Q psy11701 451 SIRELIVNKGESTTTEVD--KFVPASKNFARVLAFNGAYNGPPSEIISFVTPE-GVPGTVQSLEAIPLGSSAFYLKWVKP 527 (745)
Q Consensus 451 ~~~~~~~~~~~~~~~~i~--~L~~~~~Y~~~V~a~n~~G~g~~S~~~~~~t~~-~~P~~p~~~~~~~~~~~~i~l~W~~p 527 (745)
.........+....+.+. ++...+.|.|+|.|.|..|.+..+ .+.+.+.+ ..|+||.++.+...+.+++.|+|++|
T Consensus 183 ~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~-~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P 261 (380)
T 3lb6_C 183 QCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSS-YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIP 261 (380)
T ss_dssp ECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCE-EEEECGGGSCCCCCCEEEEEC-------CEEEECC
T ss_pred cCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccc-cEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCC
Confidence 111122212233355555 567889999999999998876543 35566655 47889999998877788999999998
Q ss_pred CCC-CCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecC-CCCCccEEEEEEEEec---CCCCCCcceeeeccc
Q psy11701 528 EQP-NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG-LEPSTKYRIHLAGYTK---AGDGAESKYLFYVPF 602 (745)
Q Consensus 528 ~~~-~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~~V~a~n~---~G~g~~S~~~~~~~~ 602 (745)
... ++.+.+|.|+|+..+ ..|.... . ..++.|.+ |.|++.|.|+|+|... .+.|.+|+++.....
T Consensus 262 ~~~~~~~~l~Yev~y~~~~-~~w~~~~-----~----~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~ 331 (380)
T 3lb6_C 262 LGPIPARCFDYEIEIREDD-TTLVTAT-----V----ENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCW 331 (380)
T ss_dssp SSSCCSTTEEEEECC---------CCE-----E----SSSCC------------CCEEEEECTTTCSSCCCCCCCCC---
T ss_pred CCCCCcceEEEEEEEEeCC-CCceEec-----c----cceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEE
Confidence 754 357899999999853 2222211 1 13577889 9999999999999954 345666666544444
Q ss_pred CCC
Q psy11701 603 KNP 605 (745)
Q Consensus 603 ~~~ 605 (745)
.++
T Consensus 332 ~t~ 334 (380)
T 3lb6_C 332 EGE 334 (380)
T ss_dssp ---
T ss_pred eCC
Confidence 443
No 401
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.66 E-value=3.5e-16 Score=151.00 Aligned_cols=171 Identities=18% Similarity=0.263 Sum_probs=119.1
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecC-----CCeEEEEeCCE--ec---c------CCCCCCceee----cCceEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLP-----EPEIHWVHNGK--PI---S------QAPPNPRRKV----GPNRITI 184 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-----~~~v~W~~~g~--~~---~------~~~~~~~~~~----~~~~L~i 184 (745)
.+.+...|....+.+|++++|.|.+.+.+ .+.+.|+|++. .+ . ......++.. ....|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455667888899999999999998877 58999999641 11 0 0011123322 2238999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEE-EEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCEEc
Q psy11701 185 ENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKEL 259 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 259 (745)
.+++.+|+|.|+|.+.+..+... ....|.|.. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++++..+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 99999999999999998755322 224566643 35666654444444579999999999885 443 79999999887
Q ss_pred cCc-eEEE----eec------CcEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 260 TGG-RYTI----LET------GDLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 260 ~~~-~~~~----~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
... .... ..+ ..|.|.++..+|+|.|+|.|.|....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 654 1111 112 24899999999999999999987644
No 402
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.66 E-value=2.9e-16 Score=153.78 Aligned_cols=164 Identities=18% Similarity=0.285 Sum_probs=112.6
Q ss_pred eccceeEecCCcEEEEEEEeec--CCCeeEEEECC--EecC-------C----------CCCeEec--cC--CcEEEEcc
Q psy11701 39 TRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VPIN-------P----------SDRISQG--NY--GKSLIIKH 93 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~i~-------~----------~~~~~~~--~~--~~~L~i~~ 93 (745)
.|....+.+|++|+|.|.+.+. +.+.+.|+|.. ..+. . ..|+.+. .. ..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 6 QSGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3778889999999999999875 55789999732 1111 0 1344433 11 23799999
Q ss_pred CCCCCCEEEEEEEEeC--------CeeeEEEEEEEEEEe---------------cCeEEecCceeEeeCCCeEEEEEEEe
Q psy11701 94 VEFSDQGSYTCEVSNG--------VGEAKSYSIDLSVLA---------------APYFTVEPEFINAAEEETVTFECKAS 150 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~--------~g~~~~~~~~l~V~~---------------~p~~~~~~~~~~v~~G~~~~l~C~~~ 150 (745)
++.+|+|.|+|.+.+. ..........|.|.. ++.+...|. ..+.+|++++|.|.+.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~ 164 (280)
T 3fku_X 86 LRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGN 164 (280)
T ss_dssp CCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECC
T ss_pred CChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEec
Confidence 9999999999999875 112222345666665 455555566 8899999999999998
Q ss_pred e-cC-CCeEEEEeC--CEecc---CC------CCCCceee----cCceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 151 G-LP-EPEIHWVHN--GKPIS---QA------PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 151 ~-~p-~~~v~W~~~--g~~~~---~~------~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
+ .+ .+.+.|+|. +..+. .. ....++.. ....|.|.+++.+|+|.|+|.+.+..
T Consensus 165 ~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 165 SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 7 44 379999983 22211 00 00112221 12359999999999999999999876
No 403
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.66 E-value=3.4e-16 Score=147.66 Aligned_cols=167 Identities=22% Similarity=0.347 Sum_probs=116.3
Q ss_pred cCceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Ee---cc-C----C--------CCCCceee------cCceEEE
Q psy11701 131 EPEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KP---IS-Q----A--------PPNPRRKV------GPNRITI 184 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~---~~-~----~--------~~~~~~~~------~~~~L~i 184 (745)
.|....+.+|++++|.|.+.+.+ .+.+.|+|++ .. +. . . ....++.. +...|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 35567889999999999998765 6799999953 11 10 0 0 00123322 1238999
Q ss_pred ccCCCCCCEEEEEEEEeCCceE-E--EEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCC
Q psy11701 185 ENLRKSDTGNYGCNATNSLGYV-Y--KDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQ 256 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~~-~--~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~ 256 (745)
.+++.+|+|.|+|.+.+..+.. . ....|.|.. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGA 165 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCC
Confidence 9999999999999999875432 1 235666653 34555544434456789999999999987 888 99999987
Q ss_pred EEc-----cC----ceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEE
Q psy11701 257 KEL-----TG----GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300 (745)
Q Consensus 257 ~~~-----~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 300 (745)
... .. +.+ ...+.|.|.++..+| |.|+|.|.|..+...+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~--~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 166 LSSGVRTVSSVLQSGFY--SLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp CCTTEEECCCEEETTEE--EEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cccceEEcCCcccCCeE--EEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 631 11 112 123568999888766 999999999998765543
No 404
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.66 E-value=8.3e-17 Score=151.29 Aligned_cols=172 Identities=18% Similarity=0.267 Sum_probs=113.5
Q ss_pred ecCeEEecCceeE--eeCCCeEEEEEEEeec---CC-CeEEEEeCCEeccCCCC------CCceeecCceEEEccCCCCC
Q psy11701 124 AAPYFTVEPEFIN--AAEEETVTFECKASGL---PE-PEIHWVHNGKPISQAPP------NPRRKVGPNRITIENLRKSD 191 (745)
Q Consensus 124 ~~p~~~~~~~~~~--v~~G~~~~l~C~~~~~---p~-~~v~W~~~g~~~~~~~~------~~~~~~~~~~L~i~~v~~~d 191 (745)
.+|.+...|.... +.+|++++|.|.+.+. |. +.|+|+|++..+..... ........+.|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 3555555554444 7899999999999886 33 69999999987753210 00111123579999999999
Q ss_pred CEEEEEEEEeCCceE--EEEEEE-EEeecCCeeeeCCCceEEecCceEEEEEEEee-cCCC-eEEEeeCCEEccCce---
Q psy11701 192 TGNYGCNATNSLGYV--YKDVYV-NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQKELTGGR--- 263 (745)
Q Consensus 192 ~G~Y~C~~~~~~g~~--~~~~~l-~v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~--- 263 (745)
+|.|+|.+.|..+.. ...+.+ .....+|.+...+.......|+.++|.|.+.| .|.+ .|.|++++..+....
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecc
Confidence 999999999987643 222211 01224666655444333335999999999998 5655 899999998774321
Q ss_pred EEEeecCc------EEEcccCCCCCEEEEEEEEeCCce
Q psy11701 264 YTILETGD------LKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 264 ~~~~~~~~------l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.....++. |.|.....+|.|.|+|.|.|....
T Consensus 168 ~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 168 PVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 11233443 444444445689999999997643
No 405
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.66 E-value=7.9e-16 Score=149.04 Aligned_cols=163 Identities=18% Similarity=0.300 Sum_probs=110.9
Q ss_pred cCceeEeeCCCeEEEEEEEeec--CCCeEEEEeCC--Eecc---C------CCCCCceee----cCceEEEccCCCCCCE
Q psy11701 131 EPEFINAAEEETVTFECKASGL--PEPEIHWVHNG--KPIS---Q------APPNPRRKV----GPNRITIENLRKSDTG 193 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~g--~~~~---~------~~~~~~~~~----~~~~L~i~~v~~~d~G 193 (745)
.|....+.+|++++|.|.+.+. +.+.+.|+|++ .... . .....++.. ....|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 4556789999999999999876 77899999842 1110 0 001122222 1237999999999999
Q ss_pred EEEEEEEeCCceE---EEEEEEEEeecCC-------------------eeeeCCCceEEecCceEEEEEEEeecC--CCe
Q psy11701 194 NYGCNATNSLGYV---YKDVYVNVLAHAP-------------------EITEAPKDEYTVDGKTVVLTCRVFGAP--KPE 249 (745)
Q Consensus 194 ~Y~C~~~~~~g~~---~~~~~l~v~~~~p-------------------~~~~~~~~~~v~~g~~~~l~C~~~~~p--~~~ 249 (745)
.|+|.+.+..+.. .....|.|...+. .....+....+.+|++++|.|.+.+.+ .+.
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 167 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYA 167 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccE
Confidence 9999999865422 2235666664321 122233445688999999999998876 678
Q ss_pred EEEeeC--CEEc------------------cCceEEEeecC-----cEEEcccCCCCCEEEEEEEEeCC
Q psy11701 250 VNWIHN--QKEL------------------TGGRYTILETG-----DLKITDVAFADSGEYTCFARNKL 293 (745)
Q Consensus 250 i~W~~~--~~~~------------------~~~~~~~~~~~-----~l~i~~~~~~d~G~Y~C~~~n~~ 293 (745)
+.|+++ +..+ ...++....++ .|.|.+++.+|+|.|.|.+.|..
T Consensus 168 v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 168 MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 999986 2211 11245444332 39999999999999999999863
No 406
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.65 E-value=2.3e-15 Score=138.31 Aligned_cols=179 Identities=13% Similarity=0.146 Sum_probs=119.9
Q ss_pred CCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEE
Q psy11701 506 TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585 (745)
Q Consensus 506 ~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~ 585 (745)
+|+++++.....+ ..|.|++|.+.++.+. |.|+|+..+ .|. .... +...+.+.|.+|.+++.|.|+|.|.
T Consensus 4 ~P~nv~~~s~n~~-~iL~W~pp~~~~~~v~-Y~V~y~~~~--~w~---~~c~---~~~~~~c~lt~l~~~~~Y~~rV~A~ 73 (201)
T 3lqm_A 4 PPENVRMNSVNFK-NILQWESPAFAKGQLT-FTAQYLSYR--IFQ---DKCM---QTTLTECDFSSLSKYGDHTLRVRAE 73 (201)
T ss_dssp CCEEEEEEEETTE-EEEEEECCCCSSSCCE-EEEEEEETT--EEE---EEEE---EESSSEEECTTSCSSSCEEEEEEEE
T ss_pred CCcccEEEEECCc-eEEEECCCCCCCCCeE-EEEEEEECC--Ccc---cCcC---ccCCCEEECCCCccCCCEEEEEEEe
Confidence 5789998887665 5699999998777765 999999752 222 1111 3356788999999999999999999
Q ss_pred ecCCCCCCcceeeeccc----CCCCCCCCCCCCCcceeEEEeecCccccCC---------CcceEEEEEeccCCCCCCCc
Q psy11701 586 TKAGDGAESKYLFYVPF----KNPDNVEGRGSTPNNLVISWTAMPEIEHNA---------PHFKYRIFWRRHNTGEAWNQ 652 (745)
Q Consensus 586 n~~G~g~~S~~~~~~~~----~~~~~~~~~~~~p~~~~v~W~~~~~~~~~g---------~i~~y~i~~~~~~~~~~~~~ 652 (745)
+..|.|.++.. .+... ..++.+.. ....++|.|+|.+|... .+| .+..|.|.|...
T Consensus 74 ~~~~~S~~s~~-~f~~~~~t~~~PP~v~~-~~~~~si~v~w~~P~~~-~~~~~~~~~~~~~~l~Y~v~y~~~-------- 142 (201)
T 3lqm_A 74 FADEHSDWVQI-TFSPVDDTIIGPPGMQV-EVLADCLHMRFLAPKIE-NEYETWTMKNVYNSWTYNVQYWKQ-------- 142 (201)
T ss_dssp ETTEECCCEEE-EECHHHHSBCCCCEEEE-EEETTEEEEEEECCEEE-CSSCEEEHHHHCTTCEEEEEEEET--------
T ss_pred cCCCcCcceee-eeeecccCeeCCCEEEE-EEeCCEEEEEEcCCCcc-CCCcccCHHHhCCceEEEEEEEEC--------
Confidence 99998888753 22211 11122221 12235666666654322 112 145555544332
Q ss_pred cCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecC--cccCCC
Q psy11701 653 DDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG--AYNGPP 730 (745)
Q Consensus 653 ~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~--~G~g~~ 730 (745)
+.... . . .......+.|.+|+|++.|-|+|+|.+. +|.|.+
T Consensus 143 --------------------------------~~~~~--~--~-~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~ 185 (201)
T 3lqm_A 143 --------------------------------GTDEK--F--Q-ITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEW 185 (201)
T ss_dssp --------------------------------TCCCC--E--E-ECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCC
T ss_pred --------------------------------CCCcE--E--E-EEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCc
Confidence 11111 1 1 1245677899999999999999999996 789999
Q ss_pred CcceEEeCCCCC
Q psy11701 731 SEIISFVTPEGG 742 (745)
Q Consensus 731 s~~~~~~t~~~~ 742 (745)
|+++.++|..+.
T Consensus 186 S~~~c~~T~~~~ 197 (201)
T 3lqm_A 186 SEPVCEQTTHDE 197 (201)
T ss_dssp CCCEEEECCCGG
T ss_pred CCCEeEEeCCCC
Confidence 999999997665
No 407
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.65 E-value=2.9e-15 Score=141.04 Aligned_cols=165 Identities=19% Similarity=0.306 Sum_probs=114.4
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Ee---cc-----------CCCCCCceeec------CceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KP---IS-----------QAPPNPRRKVG------PNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~---~~-----------~~~~~~~~~~~------~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|.. .. +. ......++... ...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4557889999999999998765 5689999842 11 10 01112333321 248999999
Q ss_pred CCCCCEEEEEEEEeCCceE---EEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CC--CeEEEeeCCEE
Q psy11701 188 RKSDTGNYGCNATNSLGYV---YKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK--PEVNWIHNQKE 258 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g~~---~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~--~~i~W~~~~~~ 258 (745)
+.+|+|.|.|.+.+..+.. .....|.|.. .+|.+...+ ...+..|+.++|.|.+.+. |. +.+.|++++..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 9999999999999875531 2235677764 245555444 3345689999999999887 65 68999999865
Q ss_pred cc--CceEEEeec------CcEEEcccCCCCCEEEEEEEEeCCceEE
Q psy11701 259 LT--GGRYTILET------GDLKITDVAFADSGEYTCFARNKLGTAQ 297 (745)
Q Consensus 259 ~~--~~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 297 (745)
+. ........+ ..|.|......|.|.|+|.|.|..+...
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 41 000011111 2488888888999999999999887754
No 408
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=7.7e-16 Score=129.51 Aligned_cols=111 Identities=23% Similarity=0.307 Sum_probs=89.6
Q ss_pred CCCCCCcceEEeCCCCCCC-CCCceeEE-EcCCceEEEEeeCC--CCCCCceeeEEEEEEEcCCcccCCcccccccccCC
Q psy11701 487 YNGPPSEIISFVTPEGVPG-TVQSLEAI-PLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~-~p~~~~~~-~~~~~~i~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 562 (745)
|.|++|..+.++|.+++|. +|.++++. ..+.++|.|+|++| ...+|.|++|+|+|+.........+... + ..
T Consensus 1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~---~-~~ 76 (124)
T 2dbj_A 1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEE---V-GQ 76 (124)
T ss_dssp CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEE---E-ES
T ss_pred CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEE---e-CC
Confidence 6788999999999999887 78899988 58899999999999 5678999999999975433221122110 1 34
Q ss_pred CcceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 563 ~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
..+++.|.+|.|++.|.|+|.|+|.+|.|++|..+.+.+
T Consensus 77 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T 115 (124)
T 2dbj_A 77 NGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFI 115 (124)
T ss_dssp TTSCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEEC
T ss_pred CcceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEc
Confidence 568999999999999999999999999999998775553
No 409
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.65 E-value=2.5e-15 Score=141.81 Aligned_cols=166 Identities=19% Similarity=0.322 Sum_probs=113.8
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--E---ecc-----------CCCCCCceeec------CceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--K---PIS-----------QAPPNPRRKVG------PNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~---~~~-----------~~~~~~~~~~~------~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|.. . .+. ......++... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 4566789999999999998765 4689999843 1 110 01112333321 248999999
Q ss_pred CCCCCEEEEEEEEeCCc----e--EEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEee-C
Q psy11701 188 RKSDTGNYGCNATNSLG----Y--VYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIH-N 255 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g----~--~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~-~ 255 (745)
+.+|+|.|.|.+.+..| . ......|.|.. .+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++ +
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 99999999999998653 1 11235677763 34555432222235689999999999887 666 999999 8
Q ss_pred CEEccC----------ceEEEeecCcEEEcccCC--CCCEEEEEEEEeCCceEEEE
Q psy11701 256 QKELTG----------GRYTILETGDLKITDVAF--ADSGEYTCFARNKLGTAQGS 299 (745)
Q Consensus 256 ~~~~~~----------~~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~n~~g~~~~~ 299 (745)
+..+.. +.+. ....|.|..... +|.|.|+|.|.|..+.....
T Consensus 167 g~~l~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 167 NSDISSTRGFPSVLRGGKYA--ATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp SCBCSCEEECCCEEETTEEE--EEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred CCccceeEECCccccCCeEE--EEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 877643 1111 123578877766 78999999999998876543
No 410
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.65 E-value=6e-16 Score=147.79 Aligned_cols=166 Identities=21% Similarity=0.325 Sum_probs=111.9
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Ee---c------------CCCCCeEecc---CCcEEEEccCCC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VP---I------------NPSDRISQGN---YGKSLIIKHVEF 96 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~---i------------~~~~~~~~~~---~~~~L~i~~~~~ 96 (745)
...|..+.+.+|++++|.|.+. .+.+.+.|+|++ .. + ....|+.+.. ...+|.|.+++.
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 4567788999999999999995 467799999853 11 1 0134555432 234899999999
Q ss_pred CCCEEEEEEEEeCCe----eeEEEEEEEEEEe------cCeEEec-CceeEeeCCCeEEEEEEEeec-CCC-eEEEEeCC
Q psy11701 97 SDQGSYTCEVSNGVG----EAKSYSIDLSVLA------APYFTVE-PEFINAAEEETVTFECKASGL-PEP-EIHWVHNG 163 (745)
Q Consensus 97 ~d~G~Y~C~~~~~~g----~~~~~~~~l~V~~------~p~~~~~-~~~~~v~~G~~~~l~C~~~~~-p~~-~v~W~~~g 163 (745)
+|+|.|+|.+.+..+ ........|.|.. +|.+... |....+.+|+.++|.|.+.|. |.+ .+.|+++|
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 161 (238)
T 1bec_A 82 SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 161 (238)
T ss_dssp GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETT
T ss_pred ccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECC
Confidence 999999999987631 1111234567764 5655443 444556789999999999985 654 99999999
Q ss_pred EeccCCCCCC--ceeecCce------EEEccCCCCC-CEEEEEEEEeCC
Q psy11701 164 KPISQAPPNP--RRKVGPNR------ITIENLRKSD-TGNYGCNATNSL 203 (745)
Q Consensus 164 ~~~~~~~~~~--~~~~~~~~------L~i~~v~~~d-~G~Y~C~~~~~~ 203 (745)
..+....... .....++. |.|......| .|.|+|.|.|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 162 KEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred EECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 9886432111 11123333 3344333333 678999999874
No 411
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.65 E-value=4.8e-16 Score=132.91 Aligned_cols=126 Identities=22% Similarity=0.320 Sum_probs=98.7
Q ss_pred CCCCCCcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCCCC--CCCceeeEEEEEEEcCCcccCCcccccccccCCC
Q psy11701 487 YNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKPEQ--PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p~~--~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 563 (745)
|.|++|..+.++|.+++|. +|.++++...+.++|.|+|++|.. .+|.|.+|.|+|+..+...+.... .....
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~~~~ 75 (132)
T 1x5h_A 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTET-----LVSGT 75 (132)
T ss_dssp CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECC-----BCCTT
T ss_pred CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEE-----EeCCC
Confidence 6788999999999999998 678999999999999999999986 788999999999986644322111 12567
Q ss_pred cceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecccCCCCCCCCCCCCCcc
Q psy11701 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNN 617 (745)
Q Consensus 564 ~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~~~~~~~~~~~~~p~~ 617 (745)
.++++|.+|+|++.|.|+|.|+|..|.|++|..+.+.+..........|..|.+
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~ 129 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVSGP 129 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCCCCCCCCCCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcccCCcccCCCCCCC
Confidence 789999999999999999999999999999987765544332222234455543
No 412
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.65 E-value=9.1e-16 Score=128.28 Aligned_cols=106 Identities=26% Similarity=0.376 Sum_probs=91.9
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcce
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (745)
|.|++|..+.++|.+++|++|.++++...+.++|.|+|++|.+.+|.|.+|.|+|+..+........ ......++
T Consensus 1 G~g~~S~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~ 75 (119)
T 1wfn_A 1 GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH-----YLPNVTLE 75 (119)
T ss_dssp CCCCCSCCCSCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE-----EECSSCCE
T ss_pred CCCCCCCCEEEECCCCCCCCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEE-----EeCCCceE
Confidence 6788999999999999999999999999999999999999998889999999999987644321111 11456789
Q ss_pred eeecCCCCCccEEEEEEEEecCCCCCCccee
Q psy11701 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597 (745)
Q Consensus 567 ~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~ 597 (745)
+.|.+|.|++.|.|+|.|+|.+|.|++|..+
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 9999999999999999999999999998775
No 413
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.64 E-value=1.4e-15 Score=147.43 Aligned_cols=167 Identities=18% Similarity=0.318 Sum_probs=115.4
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecC------CCeEEEEeC--CEecc---C------CCCCCceee----cCceEEE
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLP------EPEIHWVHN--GKPIS---Q------APPNPRRKV----GPNRITI 184 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p------~~~v~W~~~--g~~~~---~------~~~~~~~~~----~~~~L~i 184 (745)
+.+...|....+.+|++++|.|.+.+.+ .+.+.|+|+ |..+. . .....++.. ....|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 4556678888999999999999998876 579999984 22111 0 001223322 2348999
Q ss_pred ccCCCCCCEEEEEEEEeCCceE-EEEEEEEEeecC-----------------Cee-eeCCCceEEecCceEEEEEEEeec
Q psy11701 185 ENLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAHA-----------------PEI-TEAPKDEYTVDGKTVVLTCRVFGA 245 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g~~-~~~~~l~v~~~~-----------------p~~-~~~~~~~~v~~g~~~~l~C~~~~~ 245 (745)
.+++.+|+|.|.|.+.+..+.. .....|.|...+ |.+ ...+....+.+|++++|.|.+.+.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 165 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGY 165 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESS
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCC
Confidence 9999999999999999875432 223566666431 122 223334578899999999999887
Q ss_pred CC--CeEEEeeCC--EE---cc---------------CceEEEee-----cCcEEEcccCCCCCEEEEEEEEeC
Q psy11701 246 PK--PEVNWIHNQ--KE---LT---------------GGRYTILE-----TGDLKITDVAFADSGEYTCFARNK 292 (745)
Q Consensus 246 p~--~~i~W~~~~--~~---~~---------------~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~~~n~ 292 (745)
+. +.+.|+++. .. +. ..++.+.. ...|.|.+++.+|+|.|.|.+.|.
T Consensus 166 ~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 166 SFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp CGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred ccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 64 689999863 11 10 23443322 237999999999999999999985
No 414
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.64 E-value=6.4e-16 Score=144.60 Aligned_cols=165 Identities=16% Similarity=0.273 Sum_probs=112.5
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeC--CEecc----C---------CCCCCceee------cCceEEEccCC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHN--GKPIS----Q---------APPNPRRKV------GPNRITIENLR 188 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--g~~~~----~---------~~~~~~~~~------~~~~L~i~~v~ 188 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|+ |.... . .....++.. ....|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 5566789999999999998865 379999985 22210 0 001223322 12389999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCEEcc---
Q psy11701 189 KSDTGNYGCNATNSLGYVYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKELT--- 260 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~--- 260 (745)
.+|+|.|+|.+.+.. .......|.|.. .+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..+.
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 999999999998753 111224566653 34555544434456789999999999987 777 999999887532
Q ss_pred CceEE----EeecCcEEEcccCCCCCEEEEEEEEeCCceEEE
Q psy11701 261 GGRYT----ILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298 (745)
Q Consensus 261 ~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 298 (745)
..... ....+.|.|..+..+| |.|+|.|.|..+....
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 11110 1123458899888866 9999999999887543
No 415
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.64 E-value=2.9e-15 Score=141.38 Aligned_cols=190 Identities=12% Similarity=0.122 Sum_probs=116.1
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCCc-eeeEEEEEEEcCCcc----cCCcccccccccCCCcceeeecCCCCCc
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LMGYKIKYQSVKGTK----VGPLLERLPYISDPTTTSAKLAGLEPST 576 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~-i~~Y~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~L~p~t 576 (745)
.+|+.|.++.+.....++++++|+++.+.+.. ...|.|.|+...... +....... ........+...+|.+++
T Consensus 28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~--~~~~~~C~~~~~~l~~~~ 105 (236)
T 1axi_B 28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYV--SAGENSCYFNSSFTSIAI 105 (236)
T ss_dssp ----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSS--TTCTTEEEECGGGCCSSS
T ss_pred CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCC--CCCCEEEEECCcCCcccc
Confidence 57889999988888889999999976553333 258999997653321 11111000 002344667788999999
Q ss_pred cEEEEEEEEecCCCCCCcceeeecc---cCCCCCCC--CCCCC----CcceeEEEeecCcc-ccCC-CcceEEEEEeccC
Q psy11701 577 KYRIHLAGYTKAGDGAESKYLFYVP---FKNPDNVE--GRGST----PNNLVISWTAMPEI-EHNA-PHFKYRIFWRRHN 645 (745)
Q Consensus 577 ~Y~~~V~a~n~~G~g~~S~~~~~~~---~~~~~~~~--~~~~~----p~~~~v~W~~~~~~-~~~g-~i~~y~i~~~~~~ 645 (745)
.|.|+|.| | .+.+.+.. +.... ..+|.++. ..... +..|.|+|++|... ..+| .+..|.|+|+..+
T Consensus 106 ~Y~~~V~a-N-~~~s~~~~-~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~ 182 (236)
T 1axi_B 106 PYCIKLTS-N-GGTVDEKC-FSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVN 182 (236)
T ss_dssp EEEEEEEE-T-TEEEEEEE-EEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETT
T ss_pred eEEEEEEE-C-CccCCCeE-eecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECC
Confidence 99999999 8 33332211 11111 11122221 11111 23588899877543 3466 6688888888653
Q ss_pred CCCCCCccCccccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCc
Q psy11701 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725 (745)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~ 725 (745)
. ..|.. +.....+++.|.+|+|++.|.|+|+|.+.+
T Consensus 183 ~-~~w~~-------------------------------------------~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~ 218 (236)
T 1axi_B 183 E-TKWKM-------------------------------------------MDPILTTSVPVYSLKVDKEYEVRVRSKQRN 218 (236)
T ss_dssp C-SSCEE-------------------------------------------CCCBSSSEEEEEEEETTSCEEEEEEEEETT
T ss_pred C-CceEE-------------------------------------------EeccCCCEEEEeccCCCCEEEEEEEEEECC
Confidence 2 11110 112345788899999999999999999999
Q ss_pred c--cCCCCcceEEeCCC
Q psy11701 726 Y--NGPPSEIISFVTPE 740 (745)
Q Consensus 726 G--~g~~s~~~~~~t~~ 740 (745)
| .|+||+++.|+|++
T Consensus 219 gg~ws~WS~~~~~~~p~ 235 (236)
T 1axi_B 219 SGNYGEFSEVLYVTLPQ 235 (236)
T ss_dssp SSCCCCCCCCEEECCCC
T ss_pred CCCcCCCCCCEEEECCC
Confidence 8 89999999999986
No 416
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=6.8e-16 Score=128.84 Aligned_cols=109 Identities=16% Similarity=0.250 Sum_probs=91.6
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcce
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (745)
|.|.+|..+.++|...+|.+|.++++...+.++|.|+|.+|.+.+++|.+|.|+|+..... ..|.. +.....+.
T Consensus 1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~~~----~~~~~~~~ 74 (118)
T 1x3d_A 1 GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQ----CYMGSQKQ 74 (118)
T ss_dssp CCCCCCCCCCCCCCCSCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEE----EEEESCSE
T ss_pred CCCCCCcCEEEEcCCCCCcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC--CCeEE----eeccCCcE
Confidence 6788899899999999999999999999999999999999998888999999999876542 12221 11234588
Q ss_pred eeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 567 ~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
+++.+|.|++.|.|+|.|.|..|.|.+|..+...+
T Consensus 75 ~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T 109 (118)
T 1x3d_A 75 FKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 109 (118)
T ss_dssp EEEESCCTTCEEEEECCEEESSCBCCCCCCEEEEC
T ss_pred EEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEc
Confidence 99999999999999999999999999998776553
No 417
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=8.2e-16 Score=129.35 Aligned_cols=105 Identities=28% Similarity=0.450 Sum_probs=88.6
Q ss_pred cCCCCCCCCcceEEeCCCC------CCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccc
Q psy11701 484 NGAYNGPPSEIISFVTPEG------VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557 (745)
Q Consensus 484 n~~G~g~~S~~~~~~t~~~------~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~ 557 (745)
+..|.|++|..+.++|.++ +|++|.++++...+ ++|.|+|++|.+.+|.|.+|.|+|+. +..... ..
T Consensus 2 t~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~-~~~~~~-~~---- 74 (126)
T 1x5i_A 2 SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGI-GSPHAQ-TI---- 74 (126)
T ss_dssp CSCCCCCCCCCCCSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECS-SCGGGE-EE----
T ss_pred CCCccCCCCCCEEeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEc-CCCCce-EE----
Confidence 4679999999999999988 99999999999987 99999999998888999999999983 221111 11
Q ss_pred cccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcce
Q psy11701 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596 (745)
Q Consensus 558 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~ 596 (745)
......++++|.+|+|++.|.|+|.|+|.+|.|+++..
T Consensus 75 -~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~ 112 (126)
T 1x5i_A 75 -KVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE 112 (126)
T ss_dssp -ECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCC
T ss_pred -EeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceee
Confidence 11567789999999999999999999999999999754
No 418
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.63 E-value=1.5e-16 Score=151.84 Aligned_cols=167 Identities=18% Similarity=0.254 Sum_probs=114.9
Q ss_pred CceeEeeCCCeEEEEEEEeecC-CC-eEEEEeCC--Eec---c------CCCCCCceee----cCceEEEccCCCCCCEE
Q psy11701 132 PEFINAAEEETVTFECKASGLP-EP-EIHWVHNG--KPI---S------QAPPNPRRKV----GPNRITIENLRKSDTGN 194 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p-~~-~v~W~~~g--~~~---~------~~~~~~~~~~----~~~~L~i~~v~~~d~G~ 194 (745)
|....+.+|++++|.|.+.+.+ .+ .+.|+|++ ..+ . ......++.. ....|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 7777899999999999998754 34 79999863 221 0 0011123222 23489999999999999
Q ss_pred EEEEEEeCCce---EEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeecCC--CeEEEeeCCEEccCceEEE
Q psy11701 195 YGCNATNSLGY---VYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTI 266 (745)
Q Consensus 195 Y~C~~~~~~g~---~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~~~ 266 (745)
|+|.+.+..+. ......|.|.. .+|.+...+.......|+.++|.|.+.+.++ +.+.|++++..+.......
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99999998772 22234555532 3455544333333446889999999988643 3899999999876542211
Q ss_pred ----eec------CcEEEcccCCCCCEEEEEEEEeCCceEEE
Q psy11701 267 ----LET------GDLKITDVAFADSGEYTCFARNKLGTAQG 298 (745)
Q Consensus 267 ----~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 298 (745)
..+ ..|.|.++..+|.|.|+|.|.|......+
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 111 24889999999999999999998766433
No 419
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.63 E-value=2e-16 Score=150.94 Aligned_cols=170 Identities=21% Similarity=0.327 Sum_probs=98.5
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Eec---c------CCCCCCcee----ecCceEEEccCCC
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KPI---S------QAPPNPRRK----VGPNRITIENLRK 189 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~~---~------~~~~~~~~~----~~~~~L~i~~v~~ 189 (745)
.+.+...|....+.+|++++|.|.+.+.|.+.+.|+|++ ..+ . ......++. .....|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 344555577788999999999999998777889999853 211 0 000111221 1234799999999
Q ss_pred CCCEEEEEEEEeCCceEE-EEEEEEEee--cCCeeeeCCCceEEecCceEEEEEEEeecC-CC-eEEEeeCCEEccCc-e
Q psy11701 190 SDTGNYGCNATNSLGYVY-KDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAP-KP-EVNWIHNQKELTGG-R 263 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g~~~-~~~~l~v~~--~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p-~~-~i~W~~~~~~~~~~-~ 263 (745)
+|+|.|+|.+.+..+... ....|.|.. .+|.+...+....+..|+.++|.|.+.+.+ .+ .+.|++++..+... .
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 182 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 182 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCce
Confidence 999999999988765321 123444443 356666544444444799999999999854 33 79999999877554 1
Q ss_pred EEE----e------ecCcEEEcccCCCCCEEEEEEEEeCCc
Q psy11701 264 YTI----L------ETGDLKITDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 264 ~~~----~------~~~~l~i~~~~~~d~G~Y~C~~~n~~g 294 (745)
... . ....|.|.....+|+|.|+|.|.|...
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 183 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 111 0 112588888888999999999998643
No 420
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=9.1e-16 Score=128.97 Aligned_cols=111 Identities=23% Similarity=0.419 Sum_probs=91.9
Q ss_pred CCCCCCcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcc
Q psy11701 487 YNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (745)
|.|++|..+.+.|.++.|. +|.++++...+.++|.|+|++|.+.+|.|.+|.|+|+.........+.. .......
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~ 76 (121)
T 2dlh_A 1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMK----HNVADSQ 76 (121)
T ss_dssp CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCC----CCCSSCS
T ss_pred CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEE----EecCCce
Confidence 6789999999999988885 8999999988999999999999888899999999998765433332221 1134668
Q ss_pred eeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 566 ~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
.+.|.+|.|++.|.|+|.|+|..|.|++|..+.+.+
T Consensus 77 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 112 (121)
T 2dlh_A 77 ITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT 112 (121)
T ss_dssp EECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEEC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEEC
Confidence 899999999999999999999999999997765543
No 421
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.63 E-value=2.8e-15 Score=144.13 Aligned_cols=169 Identities=19% Similarity=0.275 Sum_probs=115.4
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe--------------CCEeccCCCCC-Cceee-----cCceEEEc
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH--------------NGKPISQAPPN-PRRKV-----GPNRITIE 185 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~--------------~g~~~~~~~~~-~~~~~-----~~~~L~i~ 185 (745)
+.+...|....+.+|++++|.| ..+.+.+.+.|+| ++......... .++.. .+..|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3456667888899999999999 6667888999998 23222222111 33332 23489999
Q ss_pred cCCCCCCEEEEEEEEeCC----ceEEEEEEEEEee-----cCCeee-eCCCceEEecCceEEEEEEEeec-CCC-eEEEe
Q psy11701 186 NLRKSDTGNYGCNATNSL----GYVYKDVYVNVLA-----HAPEIT-EAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWI 253 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~----g~~~~~~~l~v~~-----~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~ 253 (745)
+++.+|+|.|.|.+.+.. ........|.|.. .+|.+. ..+....+.+|+.++|.|.+.+. |.+ .+.|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 999999999999998532 2222335666653 345443 44444556679999999999885 444 89999
Q ss_pred eCCEEccCceEEEe---------ecC------cEEEcccCCCC-CEEEEEEEEeCCce
Q psy11701 254 HNQKELTGGRYTIL---------ETG------DLKITDVAFAD-SGEYTCFARNKLGT 295 (745)
Q Consensus 254 ~~~~~~~~~~~~~~---------~~~------~l~i~~~~~~d-~G~Y~C~~~n~~g~ 295 (745)
+++..+........ .++ .|.|.....+| .|.|+|.|.|....
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 99988764322110 122 37888887777 99999999986543
No 422
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.63 E-value=2.2e-15 Score=142.72 Aligned_cols=167 Identities=18% Similarity=0.304 Sum_probs=111.3
Q ss_pred CceeEeeCCCeEEEEEEEeecCC----CeEEEEeC--CEecc----C---------CCCCCceee------cCceEEEcc
Q psy11701 132 PEFINAAEEETVTFECKASGLPE----PEIHWVHN--GKPIS----Q---------APPNPRRKV------GPNRITIEN 186 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p~----~~v~W~~~--g~~~~----~---------~~~~~~~~~------~~~~L~i~~ 186 (745)
|....+.+|++++|.|.+.+.+. +.+.|+|+ +..+. . .....++.. ....|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 55667899999999999998764 79999984 22110 0 011223322 125899999
Q ss_pred CCCCCCEEEEEEEEeCCc------eE-E--EEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEE
Q psy11701 187 LRKSDTGNYGCNATNSLG------YV-Y--KDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNW 252 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~g------~~-~--~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W 252 (745)
++.+|+|.|.|.+.+..| .. . ..+.|.|.. .+|.+...+....+.+|+.++|.|.+.+. |.+ .+.|
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 999999999999998754 11 1 236777763 34555543333446789999999999986 766 9999
Q ss_pred eeCCEEccCc-eEEE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEE
Q psy11701 253 IHNQKELTGG-RYTI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGS 299 (745)
Q Consensus 253 ~~~~~~~~~~-~~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 299 (745)
++++..+... .... ...+.|.|..+..+| |.|+|.|.|..+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 9987653210 0001 122358888888756 99999999988775443
No 423
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=3.8e-15 Score=127.75 Aligned_cols=112 Identities=28% Similarity=0.444 Sum_probs=92.3
Q ss_pred CCCCCCcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCC--CCCCCceeeEEEEEEEcCCcccCCcccccccccCCC
Q psy11701 487 YNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 563 (745)
|.|++|..+.++|.+++|. +|.++++...+.++|.|+|++| .+.+|.|.+|.|+|+..+.......... .....
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~ 77 (134)
T 2edx_A 1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVD---GISRE 77 (134)
T ss_dssp CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEEC---CCBTT
T ss_pred CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEE---eeCCC
Confidence 6788999999999999998 7889999999999999999999 5678899999999998765432221110 11456
Q ss_pred cceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 564 ~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
.++++|.+|.|++.|.|+|.|+|..|.|++|..+...+
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 115 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRT 115 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEEC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeec
Confidence 78999999999999999999999999999987765443
No 424
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.63 E-value=4.7e-15 Score=146.13 Aligned_cols=178 Identities=19% Similarity=0.299 Sum_probs=120.4
Q ss_pred cCceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc---C-----------CCCCCceee------cCceEEEcc
Q psy11701 131 EPEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS---Q-----------APPNPRRKV------GPNRITIEN 186 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~---~-----------~~~~~~~~~------~~~~L~i~~ 186 (745)
.|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. . .....++.. ....|.|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 45567889999999999998866 5799999953 1110 0 001122221 235799999
Q ss_pred CCCCCCEEEEEEEEeCC-c--eEE--EEEEEEEee---------------cCCeeeeCCCceEEecCceEEEEEEEeecC
Q psy11701 187 LRKSDTGNYGCNATNSL-G--YVY--KDVYVNVLA---------------HAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246 (745)
Q Consensus 187 v~~~d~G~Y~C~~~~~~-g--~~~--~~~~l~v~~---------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~~p 246 (745)
++.+|+|.|+|.+.+.. | ... ....|.|.. .++.+...|....+.+|++++|.|.+.+.+
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcc
Confidence 99999999999999874 2 111 234666664 134455567777899999999999998877
Q ss_pred CC------eEEEeeCC--EE---cc----------CceEEEeec---CcEEEcccCCCCCEEEEEEEEeCCceE-EEEEE
Q psy11701 247 KP------EVNWIHNQ--KE---LT----------GGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTA-QGSGS 301 (745)
Q Consensus 247 ~~------~i~W~~~~--~~---~~----------~~~~~~~~~---~~l~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~ 301 (745)
.+ .+.|+++. .. +. ..++..... ..|.|.+++.+|+|.|.|.+.+..... .....
T Consensus 188 ~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~ 267 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTK 267 (291)
T ss_dssp EETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEE
Confidence 65 89999952 21 10 234443322 369999999999999999999854322 22345
Q ss_pred EEEeecc
Q psy11701 302 LTVKEHT 308 (745)
Q Consensus 302 l~v~~~p 308 (745)
|.|+..+
T Consensus 268 l~v~~~~ 274 (291)
T 2gki_A 268 LEIKHHH 274 (291)
T ss_dssp EEEECC-
T ss_pred EEEEeeE
Confidence 6665544
No 425
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.63 E-value=1.5e-15 Score=143.53 Aligned_cols=163 Identities=18% Similarity=0.256 Sum_probs=111.0
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc--------------CCCCCCceee------cCceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS--------------QAPPNPRRKV------GPNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~--------------~~~~~~~~~~------~~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ......++.. ....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4556789999999999998866 6799999853 2110 0011233332 1358999999
Q ss_pred CCCCCEEEEEEEEeCCc-----e---EEEEEEEEEee---cCCeeee-CCCceEEecCceEEEEEEEeec-CCC-eEEEe
Q psy11701 188 RKSDTGNYGCNATNSLG-----Y---VYKDVYVNVLA---HAPEITE-APKDEYTVDGKTVVLTCRVFGA-PKP-EVNWI 253 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g-----~---~~~~~~l~v~~---~~p~~~~-~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~ 253 (745)
+.+|+|.|.|.+.+..| . ......|.|.. .+|.+.. .+.. .+.+|+.++|.|.+.+. |.+ .+.|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 99999999999998754 2 11235677764 2355443 3332 35689999999999986 665 89999
Q ss_pred eCCEEccCc--eEEEee------cCcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 254 HNQKELTGG--RYTILE------TGDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 254 ~~~~~~~~~--~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
+++..+... ...... ...|.|..+..+| |.|+|.|.|..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 988653210 000111 2358899888888 99999999976554
No 426
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.63 E-value=2.6e-16 Score=148.68 Aligned_cols=169 Identities=20% Similarity=0.277 Sum_probs=117.3
Q ss_pred CceeEeeCCCeEEEEEEEee-cCCC----eEEEEeCCEeccCCCC----------CCcee---------ecCceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASG-LPEP----EIHWVHNGKPISQAPP----------NPRRK---------VGPNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~-~p~~----~v~W~~~g~~~~~~~~----------~~~~~---------~~~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+ .+.+ .+.|+|++........ ..+.. ..+..|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 55667889999999999954 4433 4999998653211000 11111 13568999999
Q ss_pred CCCCCEEEEEEEEeCC-ceEEEEEEEEEeecCCeeeeCCCceEEecCceE-EEEEEEe-ecCCCeEEEeeCCEEccCceE
Q psy11701 188 RKSDTGNYGCNATNSL-GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV-VLTCRVF-GAPKPEVNWIHNQKELTGGRY 264 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~-g~~~~~~~l~v~~~~p~~~~~~~~~~v~~g~~~-~l~C~~~-~~p~~~i~W~~~~~~~~~~~~ 264 (745)
+.+|+|.|+|.+.+.. +.....+.|.|.. +|.+...+.... ..|+.+ .|.|.+. +.|.+.+.|++++........
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~-~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLA-KPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCC-CCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEE-CCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccce
Confidence 9999999999999876 6667777777775 666654433333 578888 4999987 788899999987443321111
Q ss_pred -EE------eecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 265 -TI------LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL 302 (745)
Q Consensus 265 -~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 302 (745)
.. ...+.|.|.++..+|.|.|+|.|.|..+.......|
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEE
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEE
Confidence 11 112359999999999999999999987765444433
No 427
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.63 E-value=1.7e-15 Score=147.68 Aligned_cols=170 Identities=16% Similarity=0.268 Sum_probs=114.3
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe--CCEe------------ccCCCCC-Cceee-----cCceEEE
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH--NGKP------------ISQAPPN-PRRKV-----GPNRITI 184 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~--~g~~------------~~~~~~~-~~~~~-----~~~~L~i 184 (745)
.+.+...|....+.+|++++|.|.+. .+.+.+.|+| .+.. ....... .++.. .+..|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 34455667788899999999999987 4778999999 2221 1111111 23322 2458999
Q ss_pred ccCCCCCCEEEEEEEEeC--CceEEEEEEEEEee-----cCCeee-eCCCceEEecCceEEEEEEEeecCCC--eEEEee
Q psy11701 185 ENLRKSDTGNYGCNATNS--LGYVYKDVYVNVLA-----HAPEIT-EAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIH 254 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~--~g~~~~~~~l~v~~-----~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~p~~--~i~W~~ 254 (745)
.+++.+|+|.|+|.+.+. .........+.|.. .+|.+. ..+....+.+|+.++|.|.+.+.+++ .+.|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999974 22333334566653 144443 34444456679999999999986554 899999
Q ss_pred CCEEccCceEEE---------------eecCcEEEcccCCCC-CEEEEEEEEeCCce
Q psy11701 255 NQKELTGGRYTI---------------LETGDLKITDVAFAD-SGEYTCFARNKLGT 295 (745)
Q Consensus 255 ~~~~~~~~~~~~---------------~~~~~l~i~~~~~~d-~G~Y~C~~~n~~g~ 295 (745)
++..+....... .....|.|.....+| .|.|+|.|.|....
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 998775432111 011246777777677 99999999987543
No 428
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.62 E-value=4.1e-15 Score=119.05 Aligned_cols=91 Identities=25% Similarity=0.422 Sum_probs=77.2
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCC--CeEeccC--CcEEEEccCCCCCCEEEEEEEEe
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNY--GKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~--~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
|+.|...|.+..+.+|+++.|.|.+.|.|.|.+.|+|||++|.... ++.+... ..+|.|.+++.+|+|.|+|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 5566778899999999999999999999999999999999997643 5554333 35899999999999999999999
Q ss_pred CCeeeEEEEEEEEEEe
Q psy11701 109 GVGEAKSYSIDLSVLA 124 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~ 124 (745)
..|... ..+.|.|..
T Consensus 85 ~~G~~~-~~~~l~V~~ 99 (100)
T 3knb_A 85 EFGSDS-ATVNIHIRS 99 (100)
T ss_dssp TTEEEE-EEEEEEEEC
T ss_pred CCCEEE-EEEEEEEEE
Confidence 999876 668888753
No 429
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=146.67 Aligned_cols=167 Identities=18% Similarity=0.278 Sum_probs=111.8
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCCeeEEEEC--CEec------CC---------CC-CeEeccCCc-EEEEccCCCC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPI------NP---------SD-RISQGNYGK-SLIIKHVEFS 97 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~i------~~---------~~-~~~~~~~~~-~L~i~~~~~~ 97 (745)
...|..+.+.+|++++|.|.+.+.+.+.+.|+|. +..+ .. .+ |+.+...+. .|.|.+++.+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~ 84 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMS 84 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCS
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChh
Confidence 3456778899999999999998888889999982 1110 00 11 444322211 1999999999
Q ss_pred CCEEEEEEEEeCCe---e--eEEEEEEEEEE------ecCeEEec-CceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCC
Q psy11701 98 DQGSYTCEVSNGVG---E--AKSYSIDLSVL------AAPYFTVE-PEFINAAEEETVTFECKASG-LPEP-EIHWVHNG 163 (745)
Q Consensus 98 d~G~Y~C~~~~~~g---~--~~~~~~~l~V~------~~p~~~~~-~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g 163 (745)
|+|.|+|.+.+..+ . .......|.|. .+|.+... +....+..|+.++|.|.+.| .|.+ .++|+++|
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g 164 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 164 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECC
Confidence 99999999986532 1 11223456665 34554433 33333446799999999988 6666 89999999
Q ss_pred EeccCCCCCC------------ceeecCceEEEccCCCCC-CEEEEEEEEeCC
Q psy11701 164 KPISQAPPNP------------RRKVGPNRITIENLRKSD-TGNYGCNATNSL 203 (745)
Q Consensus 164 ~~~~~~~~~~------------~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~ 203 (745)
..+....... ......+.|.|.....+| .|.|+|.|.|..
T Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 165 KEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 9886422110 111112467888887777 779999999864
No 430
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.62 E-value=3.9e-16 Score=147.66 Aligned_cols=174 Identities=17% Similarity=0.318 Sum_probs=116.7
Q ss_pred CCCCCeeEeecccee-EecCCcEEEEEEEeecC----CCeeEEEECCEecCCCCC--eEeccCC-----cEEEEccCCCC
Q psy11701 30 RHAPKQQYVTRKKEV-ALRNKKVELFCIFGGTP----LPQTIWSKDGVPINPSDR--ISQGNYG-----KSLIIKHVEFS 97 (745)
Q Consensus 30 ~~~p~~~~~~~~~~~-v~~G~~~~l~C~~~g~p----~~~v~W~~~~~~i~~~~~--~~~~~~~-----~~L~i~~~~~~ 97 (745)
..+|..++..|.... +..|++++|.|.+.|++ ..+|+|+|||.++..... .....++ +.|.|.....+
T Consensus 20 ~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~ 99 (240)
T 4acp_A 20 LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWL 99 (240)
T ss_dssp ---CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhcc
Confidence 356888888888877 77899999999999874 238999999999854311 1111111 36888777778
Q ss_pred CCEEEEEEEEeCCee-eEEEEEEE--EEEecCeEEecCceeEeeCCCeEEEEEEEee-cCCC-eEEEEeCCEeccCCCCC
Q psy11701 98 DQGSYTCEVSNGVGE-AKSYSIDL--SVLAAPYFTVEPEFINAAEEETVTFECKASG-LPEP-EIHWVHNGKPISQAPPN 172 (745)
Q Consensus 98 d~G~Y~C~~~~~~g~-~~~~~~~l--~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~-~v~W~~~g~~~~~~~~~ 172 (745)
|.|.|+|+|.+..+. .....+.+ .+..+|.+.+.+......+|+.++|.|.+.+ +|.+ .+.|+|||+.+......
T Consensus 100 d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~ 179 (240)
T 4acp_A 100 NGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKAT 179 (240)
T ss_dssp HTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEEC
T ss_pred CCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCcc
Confidence 899999999987653 33343432 2446777766655444445999999999998 5654 89999999987532211
Q ss_pred CceeecC------ceEEEccCCCCCCEEEEEEEEeCC
Q psy11701 173 PRRKVGP------NRITIENLRKSDTGNYGCNATNSL 203 (745)
Q Consensus 173 ~~~~~~~------~~L~i~~v~~~d~G~Y~C~~~~~~ 203 (745)
......+ +.|.|.....++.|.|+|+|.+..
T Consensus 180 ~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 180 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 1111222 356666665567899999999875
No 431
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.62 E-value=6.2e-15 Score=141.11 Aligned_cols=168 Identities=17% Similarity=0.292 Sum_probs=114.6
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEe--------------CCEeccCCCCCCceee-----cCceEEEccC
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH--------------NGKPISQAPPNPRRKV-----GPNRITIENL 187 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~--------------~g~~~~~~~~~~~~~~-----~~~~L~i~~v 187 (745)
.+...|....+.+|++++|.|.+.+ +.+.+.|+| ++..........++.. .+..|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 3455677888999999999999876 777999998 2222221112223322 2457999999
Q ss_pred CCCCCEEEEEEEEeCCc---eEEEEEEEEEee-----cCCeee-eCCCceEEecCceEEEEEEEee-cCCC-eEEEeeCC
Q psy11701 188 RKSDTGNYGCNATNSLG---YVYKDVYVNVLA-----HAPEIT-EAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQ 256 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g---~~~~~~~l~v~~-----~~p~~~-~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~ 256 (745)
+.+|+|.|+|.+.+..+ .......|.|.. .+|.+. ..+....+..|+.++|.|.+.+ .|.+ .+.|++++
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 99999999999983211 222334566653 345554 3444445667999999999988 4555 78999999
Q ss_pred EEccCceEE-----EeecC------cEEEcccCCCC-CEEEEEEEEeCCce
Q psy11701 257 KELTGGRYT-----ILETG------DLKITDVAFAD-SGEYTCFARNKLGT 295 (745)
Q Consensus 257 ~~~~~~~~~-----~~~~~------~l~i~~~~~~d-~G~Y~C~~~n~~g~ 295 (745)
..+...... ...++ .|.|.....+| .|.|+|.|.|....
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 887543221 11222 38888888888 77999999987543
No 432
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3.8e-15 Score=124.42 Aligned_cols=110 Identities=19% Similarity=0.275 Sum_probs=89.4
Q ss_pred CCCCCCcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcc
Q psy11701 487 YNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (745)
|.|++|..+.+.|.++.|. +|.++++...+.++|.|+|++|.. |.|.+|.|+|+..+..... +.. ..+ .....
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~~~-~~~--~~~-~~~~~ 74 (119)
T 2ee2_A 1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKEEA-ANR--VQV-TSQEY 74 (119)
T ss_dssp CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCGGG-CEE--EEE-ETTCS
T ss_pred CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcccC-cEE--EEc-CCCEe
Confidence 6788899899999998887 567999999999999999999987 7899999999876543211 111 011 34567
Q ss_pred eeeecCCCCCccEEEEEEEEecCCCCCCcceeeeccc
Q psy11701 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602 (745)
Q Consensus 566 ~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~ 602 (745)
+++|.+|+|++.|.|+|.|+|.+|.|++|..+.+.+.
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 111 (119)
T 2ee2_A 75 SARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTK 111 (119)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECC
Confidence 9999999999999999999999999999987765543
No 433
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=2.5e-15 Score=125.72 Aligned_cols=107 Identities=19% Similarity=0.266 Sum_probs=88.9
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEE-EcCCceEEEEeeCCCCCC-CceeeEEEEEEEcCCc-ccCCcccccccccCCC
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKPEQPN-GVLMGYKIKYQSVKGT-KVGPLLERLPYISDPT 563 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~-~~~~~~i~l~W~~p~~~~-g~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~ 563 (745)
|.|++|..+.++|..++|++|.++.+. ..+.++|.|+|++|.+.+ .+|.+|.|+|+..... .|... ....
T Consensus 1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-------~~~~ 73 (120)
T 2crm_A 1 GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-------YSGA 73 (120)
T ss_dssp CCCTTCSCCSCCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-------ECSS
T ss_pred CCCCCcCCEEEEeCCCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-------Eecc
Confidence 678999999999999999999998887 778899999999998764 4899999999987542 33221 1345
Q ss_pred cceeeecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 564 ~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
.+.+++.+|.|++.|.|+|.|+|..|.|++|..+...
T Consensus 74 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~ 110 (120)
T 2crm_A 74 TREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQ 110 (120)
T ss_dssp CSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEE
Confidence 7889999999999999999999999999998765443
No 434
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.62 E-value=3.8e-15 Score=143.53 Aligned_cols=169 Identities=17% Similarity=0.219 Sum_probs=113.7
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Ee---c------------CCCCCeEecc---CCcEEEEccCC
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VP---I------------NPSDRISQGN---YGKSLIIKHVE 95 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~---i------------~~~~~~~~~~---~~~~L~i~~~~ 95 (745)
+...|..+.+.+|++++|.|.+. .+.+.+.|+|+. .. + ....|+.+.. ...+|.|.+++
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 34557778899999999999995 457799999842 11 1 0134666532 23589999999
Q ss_pred CCCCEEEEEEEEeCC--eeeEEEEEEEEEE------ecCeEEec-CceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCE
Q psy11701 96 FSDQGSYTCEVSNGV--GEAKSYSIDLSVL------AAPYFTVE-PEFINAAEEETVTFECKASGL-PE-PEIHWVHNGK 164 (745)
Q Consensus 96 ~~d~G~Y~C~~~~~~--g~~~~~~~~l~V~------~~p~~~~~-~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~ 164 (745)
.+|+|.|+|.+.+.. .........|.|. .+|.+... |....+.+|+.++|.|.+.|. |. +.+.|+|+|+
T Consensus 85 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~ 164 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 164 (252)
T ss_dssp SCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred hhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCE
Confidence 999999999998751 1111122346665 35665543 444455679999999999984 65 4999999999
Q ss_pred eccCCCCCC------------ceeecCceEEEccCCCC-CCEEEEEEEEeCCce
Q psy11701 165 PISQAPPNP------------RRKVGPNRITIENLRKS-DTGNYGCNATNSLGY 205 (745)
Q Consensus 165 ~~~~~~~~~------------~~~~~~~~L~i~~v~~~-d~G~Y~C~~~~~~g~ 205 (745)
.+....... ......+.|.|...... |.|.|+|.|.|....
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 165 EVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 886432110 00011234777776654 678999999997643
No 435
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.62 E-value=1.9e-15 Score=143.20 Aligned_cols=166 Identities=15% Similarity=0.223 Sum_probs=110.6
Q ss_pred eeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--Ee---cC-------------CCCCeEecc----CCcEEEEcc
Q psy11701 38 VTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VP---IN-------------PSDRISQGN----YGKSLIIKH 93 (745)
Q Consensus 38 ~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~---i~-------------~~~~~~~~~----~~~~L~i~~ 93 (745)
..|..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. |. ...|+.+.. ...+|.|.+
T Consensus 6 q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (230)
T 1ypz_F 6 QPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYS 85 (230)
T ss_dssp CSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECS
T ss_pred ccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECc
Confidence 45677889999999999999765 56789999842 21 10 134555432 223899999
Q ss_pred CCCCCCEEEEEEEEeC---CeeeEEEEEEEEEEe---------cCeEEe-cCceeEeeCCCeEEEEEEEeec-CC-CeEE
Q psy11701 94 VEFSDQGSYTCEVSNG---VGEAKSYSIDLSVLA---------APYFTV-EPEFINAAEEETVTFECKASGL-PE-PEIH 158 (745)
Q Consensus 94 ~~~~d~G~Y~C~~~~~---~g~~~~~~~~l~V~~---------~p~~~~-~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~ 158 (745)
++.+|+|.|.|.+.+. ........+.|.|.. +|...+ .|....+.+|+.++|.|.+.+. |. +.+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~ 165 (230)
T 1ypz_F 86 LEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVY 165 (230)
T ss_dssp CCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEE
T ss_pred CChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEE
Confidence 9999999999999874 111112234677751 233222 2444445679999999999885 75 5999
Q ss_pred EEe-CCEeccCCCCCCcee-----ecCceEEEccCCCCCCEEEEEEEEeCCce
Q psy11701 159 WVH-NGKPISQAPPNPRRK-----VGPNRITIENLRKSDTGNYGCNATNSLGY 205 (745)
Q Consensus 159 W~~-~g~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~ 205 (745)
|++ +|+.+.......... ...+.|.|..+.. + |.|+|.|.|....
T Consensus 166 W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 166 WKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 999 887665322111111 1124688888776 4 9999999987653
No 436
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.61 E-value=2.8e-15 Score=164.26 Aligned_cols=165 Identities=16% Similarity=0.239 Sum_probs=120.8
Q ss_pred eccceeEecCCcEEEEEEE-eecCCCeeEEEECCEecCC------------CCCeEeccCCcEEEEccCCCCCCEEEEEE
Q psy11701 39 TRKKEVALRNKKVELFCIF-GGTPLPQTIWSKDGVPINP------------SDRISQGNYGKSLIIKHVEFSDQGSYTCE 105 (745)
Q Consensus 39 ~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W~~~~~~i~~------------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 105 (745)
......+.+|++++|.|.+ .+.|.+.+.|+|++..+.. ..+...... ++|.|.+++.+|+|.|+|.
T Consensus 372 l~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~L~i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 372 SAQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPN-GSLFLPAVGIQDEGIFRCQ 450 (581)
T ss_dssp CCEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTT-SCEEESSCCGGGCEEEEEE
T ss_pred HhcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCC-ceEEEeccccccCeEEEEE
Confidence 3456789999999999999 7889999999998753211 223444333 4799999999999999999
Q ss_pred EEeCCeeeEEEEEEEEEEecCeE-EecCceeEeeCCCeE-EEEEEEee-cCCCeEEEEeCCEeccCCCCCCcee------
Q psy11701 106 VSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETV-TFECKASG-LPEPEIHWVHNGKPISQAPPNPRRK------ 176 (745)
Q Consensus 106 ~~~~~g~~~~~~~~l~V~~~p~~-~~~~~~~~v~~G~~~-~l~C~~~~-~p~~~v~W~~~g~~~~~~~~~~~~~------ 176 (745)
+.+..+......+.|.|..+|.. ...+....+.+|+.. .|.|.+.+ .|.+.++|++||+.+..........
T Consensus 451 ~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 530 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRH 530 (581)
T ss_dssp EECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEEC
T ss_pred EEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEc
Confidence 99988887567789999875432 222333335566555 66999988 6999999999999987532221110
Q ss_pred ------ecCceEEEccCC-CCCCEEEEEEEEeCCc
Q psy11701 177 ------VGPNRITIENLR-KSDTGNYGCNATNSLG 204 (745)
Q Consensus 177 ------~~~~~L~i~~v~-~~d~G~Y~C~~~~~~g 204 (745)
...+.|.|.+++ .++.|.|+|.|+|...
T Consensus 531 ~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 531 PETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp TTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred CCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 012469999998 5558899999999854
No 437
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.61 E-value=2.5e-15 Score=153.64 Aligned_cols=172 Identities=15% Similarity=0.219 Sum_probs=120.6
Q ss_pred CCeeEeecccee-EecCCcEEEEEEEeec-CCC---eeEEEECCEecCCCCC---eEecc----CCcEEEEccCCCCCCE
Q psy11701 33 PKQQYVTRKKEV-ALRNKKVELFCIFGGT-PLP---QTIWSKDGVPINPSDR---ISQGN----YGKSLIIKHVEFSDQG 100 (745)
Q Consensus 33 p~~~~~~~~~~~-v~~G~~~~l~C~~~g~-p~~---~v~W~~~~~~i~~~~~---~~~~~----~~~~L~i~~~~~~d~G 100 (745)
|..++..+.... +.+|++++|.|.+.|. |.| .|.|+|++..+..... ..... ....|.|..++.+|.|
T Consensus 167 p~v~~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g 246 (376)
T 2aty_A 167 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGK 246 (376)
T ss_pred cEEEEeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCC
Confidence 555566666555 8999999999999887 333 7999999876542211 01101 1236999999999999
Q ss_pred EEEEEEEeCCee-eEEEEEEE--EEEecCeEEecCceeEeeCCCeEEEEEEEeec-C-CCeEEEEeCCEeccCCCCCCce
Q psy11701 101 SYTCEVSNGVGE-AKSYSIDL--SVLAAPYFTVEPEFINAAEEETVTFECKASGL-P-EPEIHWVHNGKPISQAPPNPRR 175 (745)
Q Consensus 101 ~Y~C~~~~~~g~-~~~~~~~l--~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p-~~~v~W~~~g~~~~~~~~~~~~ 175 (745)
.|+|.+.+..+. .....+.+ .+..+|.+.+.+......+|+.++|.|.+.|. | .+.|+|+|||+.+.........
T Consensus 247 ~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~ 326 (376)
T 2aty_A 247 EFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPI 326 (376)
T ss_pred EEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCce
Confidence 999999987553 22233333 55668888877776666679999999999984 4 4599999999987543221111
Q ss_pred eecC------ceEEEccCCCCCCEEEEEEEEeCCc
Q psy11701 176 KVGP------NRITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 176 ~~~~------~~L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
...+ ..|.|.....+|.|.|+|.|.|..-
T Consensus 327 ~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 327 MNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred ECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 1222 3577777777889999999998753
No 438
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.61 E-value=1.7e-15 Score=144.52 Aligned_cols=178 Identities=15% Similarity=0.179 Sum_probs=116.4
Q ss_pred eEeeccceeEecCCcEEEEEEEeecCC----CeeEEEECC--Ee---c---C----------------CCCCeEec----
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGTPL----PQTIWSKDG--VP---I---N----------------PSDRISQG---- 83 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~p~----~~v~W~~~~--~~---i---~----------------~~~~~~~~---- 83 (745)
.+..|..+.+.+|++|+|.|.+.+.+. ..+.|+|.. .. + . ..+|+.+.
T Consensus 3 ~l~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~ 82 (239)
T 3tv3_H 3 QLQESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTP 82 (239)
T ss_dssp EEEEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGG
T ss_pred eEecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECC
Confidence 345677788999999999999987653 489999832 11 1 0 01344432
Q ss_pred cCCcEEEEccCCCCCCEEEEEEEEeCCe------------eeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEE
Q psy11701 84 NYGKSLIIKHVEFSDQGSYTCEVSNGVG------------EAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFEC 147 (745)
Q Consensus 84 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~g------------~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C 147 (745)
....+|.|.+++.+|+|.|.|.+.+..+ ........|.|. .+|.+...+....+..|+.++|.|
T Consensus 83 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C 162 (239)
T 3tv3_H 83 KNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 162 (239)
T ss_dssp GTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEE
Confidence 1223699999999999999999976421 111122456664 356665555555566799999999
Q ss_pred EEee-cCCC-eEEEEeCCEeccCCCCCC-----ceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 148 KASG-LPEP-EIHWVHNGKPISQAPPNP-----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 148 ~~~~-~p~~-~v~W~~~g~~~~~~~~~~-----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
.+.+ .|.+ .+.|+++|..+....... ......+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 9988 5544 689999987543211110 111122468899988888 9999999998876655554443
No 439
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.61 E-value=4.4e-15 Score=142.67 Aligned_cols=168 Identities=20% Similarity=0.380 Sum_probs=112.6
Q ss_pred EEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEecc-----------CCCCCCceee-----cCceEEEccCCC
Q psy11701 128 FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKPIS-----------QAPPNPRRKV-----GPNRITIENLRK 189 (745)
Q Consensus 128 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~~~-----------~~~~~~~~~~-----~~~~L~i~~v~~ 189 (745)
+...|....+.+|++++|.|.+.+.+.+.+.|+|. +.... ......++.. ....|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 44557788899999999999999888899999992 11100 0011122221 234799999999
Q ss_pred CCCEEEEEEEEeCCc------eEEEEEEEEEee-----cCCeee-eCCCceEEecCceEEEEEEEeec-CCC-eEEEeeC
Q psy11701 190 SDTGNYGCNATNSLG------YVYKDVYVNVLA-----HAPEIT-EAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHN 255 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g------~~~~~~~l~v~~-----~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~ 255 (745)
+|+|.|+|.+.+..| .......|.|.. .+|.+. ..+....+..|+.++|.|.+.+. |.+ .+.|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999998322 222334566653 244443 33333345569999999999985 434 7899999
Q ss_pred CEEccCceEEEe---------ec------CcEEEcccCCCC-CEEEEEEEEeCCce
Q psy11701 256 QKELTGGRYTIL---------ET------GDLKITDVAFAD-SGEYTCFARNKLGT 295 (745)
Q Consensus 256 ~~~~~~~~~~~~---------~~------~~l~i~~~~~~d-~G~Y~C~~~n~~g~ 295 (745)
+..+........ .+ ..|.|......| .|.|+|.|.|....
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 988754322110 11 257788777777 67999999987544
No 440
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=5.9e-15 Score=119.68 Aligned_cols=93 Identities=22% Similarity=0.404 Sum_probs=79.3
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCceee-cCceEEEccCCCCCCEEEEEEEEeC
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNS 202 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~ 202 (745)
.+|.|...|.+..+.+|+++.|.|.+.|.|.+.++|+|||..+........... ....|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 478899999999999999999999999999999999999999975432211111 2347999999999999999999999
Q ss_pred CceEEEEEEEEEee
Q psy11701 203 LGYVYKDVYVNVLA 216 (745)
Q Consensus 203 ~g~~~~~~~l~v~~ 216 (745)
.|.....+.|.|..
T Consensus 92 ~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 92 AGEAYAAAAVTVLE 105 (107)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEc
Confidence 99999999998875
No 441
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.61 E-value=5.8e-15 Score=142.28 Aligned_cols=171 Identities=17% Similarity=0.281 Sum_probs=112.9
Q ss_pred CceeEeeCCCeEEEEEEEeec--CCCeEEEEeCC--E---ec-----------cCCCCCCceee------cCceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGL--PEPEIHWVHNG--K---PI-----------SQAPPNPRRKV------GPNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~g--~---~~-----------~~~~~~~~~~~------~~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+. +...+.|+|.. . .+ .......++.. ....|.|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 455678999999999999763 35689999832 1 11 00011123222 1235999999
Q ss_pred CCCCCEEEEEEEEeCC----ceEEEEEEEEEe---ecCCeeeeCCCceEEecCceEEEEEEEee-cCCC-eEEEeeCCEE
Q psy11701 188 RKSDTGNYGCNATNSL----GYVYKDVYVNVL---AHAPEITEAPKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQKE 258 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~----g~~~~~~~l~v~---~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~ 258 (745)
+.+|+|.|.|.+.+.. ........|.|. ..+|.+...+....+..|+.++|.|.+.+ .|.+ .+.|++++..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 9999999999998752 222233566665 23566654444445667999999999998 5655 8999998863
Q ss_pred c---------cCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 259 L---------TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305 (745)
Q Consensus 259 ~---------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 305 (745)
+ ..+.+. ..+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 167 ~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 167 SGVHTFPAVLQSDLYT--LSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TTEEECCCEEETTEEE--EEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cceEeCCccccCCeEE--EEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 2 112222 22569999999889 99999999998876666555544
No 442
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.60 E-value=3.5e-15 Score=145.39 Aligned_cols=169 Identities=17% Similarity=0.309 Sum_probs=114.3
Q ss_pred ecCeEEecCceeEeeCCCeEEEEEEEeecC-----CCeEEEEeCC--Ee---ccC------CCCCCceee----cCceEE
Q psy11701 124 AAPYFTVEPEFINAAEEETVTFECKASGLP-----EPEIHWVHNG--KP---ISQ------APPNPRRKV----GPNRIT 183 (745)
Q Consensus 124 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~p-----~~~v~W~~~g--~~---~~~------~~~~~~~~~----~~~~L~ 183 (745)
..+.+...|....+.+|++++|.|.+.+.+ .+.+.|+|+. .. +.. .....++.. ....|.
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 345566778888899999999999998866 4799999853 21 110 001223322 234899
Q ss_pred EccCCCCCCEEEEEEEEeCCceEE-EEEEEEEeecC--------C--------------eeeeCCCceEEecCceEEEEE
Q psy11701 184 IENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHA--------P--------------EITEAPKDEYTVDGKTVVLTC 240 (745)
Q Consensus 184 i~~v~~~d~G~Y~C~~~~~~g~~~-~~~~l~v~~~~--------p--------------~~~~~~~~~~v~~g~~~~l~C 240 (745)
|.+++.+|+|.|.|.+.+..+... ....|.|...+ | .....+....+.+|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 999999999999999998754321 22455554311 1 122334566888999999999
Q ss_pred EEeecCC--CeEEEeeCC--EEc--------------------cCceEEEeec-----CcEEEcccCCCCCEEEEEEEEe
Q psy11701 241 RVFGAPK--PEVNWIHNQ--KEL--------------------TGGRYTILET-----GDLKITDVAFADSGEYTCFARN 291 (745)
Q Consensus 241 ~~~~~p~--~~i~W~~~~--~~~--------------------~~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~n 291 (745)
.+.+.+. +.+.|+++. ..+ ...++....+ ..|.|.+++.+|+|.|.|.+.+
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 9988753 689999842 111 1235554332 3699999999999999999987
Q ss_pred C
Q psy11701 292 K 292 (745)
Q Consensus 292 ~ 292 (745)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 4
No 443
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=4.6e-15 Score=124.33 Aligned_cols=110 Identities=20% Similarity=0.241 Sum_probs=90.0
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCC-CCCCceeeEEEEEEEcCCcccCCcccccccccCCCcc
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE-QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (745)
|.+..+..+.+.|.+.+|++|.++++...+.++|.|+|++|. +.+|.|.+|.|+|+..+...+.... .......
T Consensus 1 G~sgss~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~ 75 (120)
T 1x5f_A 1 GSSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN-----TSHPGEM 75 (120)
T ss_dssp CCCCCCSSCCCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE-----CSSTTCS
T ss_pred CCCCCCCCEEecCCCCCCCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE-----eccCCcc
Confidence 344455667788889999999999999999999999999998 8888999999999987544322211 2245678
Q ss_pred eeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 566 ~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
.++|.+|+|++.|.|+|.|+|..|.|++|..+.+.+
T Consensus 76 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 111 (120)
T 1x5f_A 76 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVET 111 (120)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEEC
T ss_pred EEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEe
Confidence 999999999999999999999999999988765543
No 444
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=4.9e-15 Score=121.31 Aligned_cols=98 Identities=26% Similarity=0.494 Sum_probs=82.5
Q ss_pred eCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCcc
Q psy11701 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 498 ~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
+|.+++|++|.++++...+.++|.|+|++|.+.+|.|.+|.|+|+..+...+.... + ....+++.|.+|.|++.
T Consensus 2 tT~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~-~~~~~~~~l~~L~p~t~ 75 (108)
T 2djs_A 2 SSGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----A-RSQTNTARIDGLRPGMV 75 (108)
T ss_dssp CSCCCCCCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----E-EESSSEEEEESCCTTCE
T ss_pred ccCCCCCCCCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----E-ecCccEEEEcCCCCCCE
Confidence 46788999999999999999999999999988889999999999987654322111 1 45668999999999999
Q ss_pred EEEEEEEEecCCCCCCcceeeecc
Q psy11701 578 YRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
|.|+|.|+|..|.|++|..+.+.+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T 99 (108)
T 2djs_A 76 YVVQVRARTVAGYGKFSGKMCFQT 99 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEEC
T ss_pred EEEEEEEEeCCEECCCCCCEEEEe
Confidence 999999999999999988765543
No 445
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.60 E-value=1.1e-14 Score=133.70 Aligned_cols=177 Identities=16% Similarity=0.255 Sum_probs=126.5
Q ss_pred CCCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEE
Q psy11701 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482 (745)
Q Consensus 403 ~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a 482 (745)
.+|+++.+.. .+ ....|.|+++... ++.+ .|.|+|...+ .|..... ......+.|.+|.+...|.++|+|
T Consensus 3 p~P~nv~~~s-~n-~~~iL~W~pp~~~--~~~v-~Y~V~y~~~~----~w~~~c~-~~~~~~c~lt~l~~~~~Y~~rV~A 72 (201)
T 3lqm_A 3 PPPENVRMNS-VN-FKNILQWESPAFA--KGQL-TFTAQYLSYR----IFQDKCM-QTTLTECDFSSLSKYGDHTLRVRA 72 (201)
T ss_dssp CCCEEEEEEE-ET-TEEEEEEECCCCS--SSCC-EEEEEEEETT----EEEEEEE-EESSSEEECTTSCSSSCEEEEEEE
T ss_pred CCCcccEEEE-EC-CceEEEECCCCCC--CCCe-EEEEEEEECC----CcccCcC-ccCCCEEECCCCccCCCEEEEEEE
Confidence 4688999876 44 4567999996532 3334 5999997652 2333222 335678899999999999999999
Q ss_pred ecCCCCCCCCcceEEeC-CCCCCCCCCceeEEEcCCceEEEEeeCCCCCC-C---------ceeeEEEEEEEcCCcccCC
Q psy11701 483 FNGAYNGPPSEIISFVT-PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN-G---------VLMGYKIKYQSVKGTKVGP 551 (745)
Q Consensus 483 ~n~~G~g~~S~~~~~~t-~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~-g---------~i~~Y~v~~~~~~~~~~~~ 551 (745)
.|..|.|.++.. .+.. ....++|| .+.+. ...++|.|.|.+|...+ | .+..|.|.|...+....
T Consensus 73 ~~~~~~S~~s~~-~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~-- 147 (201)
T 3lqm_A 73 EFADEHSDWVQI-TFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEK-- 147 (201)
T ss_dssp EETTEECCCEEE-EECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCC--
T ss_pred ecCCCcCcceee-eeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcE--
Confidence 999888888763 4431 12345555 67764 45689999999986432 4 38999999987654322
Q ss_pred cccccccccCCCcceeeecCCCCCccEEEEEEEEec--CCCCCCcceeeec
Q psy11701 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK--AGDGAESKYLFYV 600 (745)
Q Consensus 552 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~--~G~g~~S~~~~~~ 600 (745)
.. + ......+.|.+|+|++.|.|+|.|.+. .|.|.+|....+.
T Consensus 148 ~~-----~-~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~ 192 (201)
T 3lqm_A 148 FQ-----I-TPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQ 192 (201)
T ss_dssp EE-----E-CCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEE
T ss_pred EE-----E-EecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEE
Confidence 11 1 234578999999999999999999997 6888888776544
No 446
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=1.3e-15 Score=121.94 Aligned_cols=95 Identities=18% Similarity=0.152 Sum_probs=76.6
Q ss_pred CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEE
Q psy11701 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581 (745)
Q Consensus 502 ~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 581 (745)
.+|++|.++.+.. ..+++.|+|++|.+++++|++|.|+|+. ....|...... + ....++|++.+|.+++.|+||
T Consensus 6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~---~-~~~~t~~~v~~L~pg~~Y~FR 79 (108)
T 1v5j_A 6 SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPA---V-AGTETELLVPGLIKDVLYEFR 79 (108)
T ss_dssp CCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEE---E-CSSCCEEECCCCCTTSCEECC
T ss_pred CCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeee---c-CCCcCEEEeCCCCCCCEEEEE
Confidence 5568999999876 5678999999999888899999999998 33334322211 1 456789999999999999999
Q ss_pred EEEEecCCCCCCcceeeeccc
Q psy11701 582 LAGYTKAGDGAESKYLFYVPF 602 (745)
Q Consensus 582 V~a~n~~G~g~~S~~~~~~~~ 602 (745)
|.|+|.+|.|.+|+.+.+.+.
T Consensus 80 V~A~n~~G~s~pS~~~~v~T~ 100 (108)
T 1v5j_A 80 LVAFAGSFVSDPSNTANVSTS 100 (108)
T ss_dssp BEEEETTEEEEECSCCCCCCS
T ss_pred EEEEcCCCCcCCCCCEEEEeC
Confidence 999999999999987655543
No 447
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.60 E-value=7.7e-16 Score=145.61 Aligned_cols=191 Identities=16% Similarity=0.278 Sum_probs=108.7
Q ss_pred EEEEEEEEeCCeeeEEEEEEEEEEecCeEEecCceeE-eeCCCeEEEEEEEeecC----CCeEEEEeCCEeccCCCCCCc
Q psy11701 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN-AAEEETVTFECKASGLP----EPEIHWVHNGKPISQAPPNPR 174 (745)
Q Consensus 100 G~Y~C~~~~~~g~~~~~~~~l~V~~~p~~~~~~~~~~-v~~G~~~~l~C~~~~~p----~~~v~W~~~g~~~~~~~~~~~ 174 (745)
|.|.|.+.+..+. . .....+..++.+...|.... +..|+.++|.|.+.|.. ...|+|+|||..+........
T Consensus 1 ~~~~~~~~~~~~~-c--~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP-C--PAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp -------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC-C--CccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 7899999876543 1 11111222333444555555 66799999999999853 348999999998854321111
Q ss_pred ee------ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE---EeecCCeeeeCCCceEEecCceEEEEEEEeec
Q psy11701 175 RK------VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN---VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245 (745)
Q Consensus 175 ~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~---v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~ 245 (745)
.. ...+.|.|.....+|.|.|+|.|.+..+.......+. ....+|.+...+.......|+.++|.|.+.+.
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf 157 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGF 157 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEE
Confidence 11 1124688888878889999999999876432222221 12246666655544433458999999999985
Q ss_pred -CC-CeEEEeeCCEEccCce---EEEeecC------cEEEcccCCCCCEEEEEEEEeCC
Q psy11701 246 -PK-PEVNWIHNQKELTGGR---YTILETG------DLKITDVAFADSGEYTCFARNKL 293 (745)
Q Consensus 246 -p~-~~i~W~~~~~~~~~~~---~~~~~~~------~l~i~~~~~~d~G~Y~C~~~n~~ 293 (745)
|. ..+.|++++..+.... .....++ .|.|......+.|.|+|.|.+..
T Consensus 158 ~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 158 YPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred eCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 54 3799999998864321 1112233 35565555567899999999875
No 448
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=6.4e-15 Score=120.66 Aligned_cols=98 Identities=19% Similarity=0.375 Sum_probs=81.1
Q ss_pred eCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCcc
Q psy11701 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 498 ~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
+|.+++|++|.++++...+.++|.|+|++|...+|.|.+|.|+|+..+......+.. + ....+.++|.+|+|++.
T Consensus 2 tT~~~~P~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----~-~~~~~~~~i~~L~p~t~ 76 (109)
T 2e7h_A 2 SSGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRF----L-KTSENRAELRGLKRGAS 76 (109)
T ss_dssp CSSCCSSCCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEE----E-EESSSEEEEESCCTTSC
T ss_pred CCCCCCCCCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEE----E-ccCCCEEEECCCCCCCe
Confidence 477889999999999999999999999999988899999999999876222221211 1 33457999999999999
Q ss_pred EEEEEEEEecCCCCCCcceeeec
Q psy11701 578 YRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
|.|+|+|+|.+|.|++|..+.+.
T Consensus 77 Y~~~V~A~n~~G~g~~S~~~~~~ 99 (109)
T 2e7h_A 77 YLVQVRARSEAGYGPFGQEHHSQ 99 (109)
T ss_dssp EEEEEEEECSSCBCCCCSCEECC
T ss_pred EEEEEEEEeCCccCCCCCCEEEE
Confidence 99999999999999999876544
No 449
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.60 E-value=5.3e-15 Score=144.80 Aligned_cols=161 Identities=20% Similarity=0.324 Sum_probs=110.8
Q ss_pred CceeEeeCCCeEEEEEEEeec--CCCeEEEEeCC--Eecc---C-C----------CCCCceeec------CceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGL--PEPEIHWVHNG--KPIS---Q-A----------PPNPRRKVG------PNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~g--~~~~---~-~----------~~~~~~~~~------~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+. +.+.+.|+|.. .... . . ....++... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 777889999999999999874 55799999842 1110 0 0 001122221 137999999
Q ss_pred CCCCCEEEEEEEEeC---------CceEEEEEEEEEee--------------cCCeeeeCCCceEEecCceEEEEEEEee
Q psy11701 188 RKSDTGNYGCNATNS---------LGYVYKDVYVNVLA--------------HAPEITEAPKDEYTVDGKTVVLTCRVFG 244 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~---------~g~~~~~~~l~v~~--------------~~p~~~~~~~~~~v~~g~~~~l~C~~~~ 244 (745)
+.+|+|.|.|.+.+. .........|.|.. .++.+...+. ..+.+|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 999999999999886 11122234566654 2445555555 78899999999999987
Q ss_pred -cC-CCeEEEeeC--CEEcc-------------CceEEEeecC---cEEEcccCCCCCEEEEEEEEeCC
Q psy11701 245 -AP-KPEVNWIHN--QKELT-------------GGRYTILETG---DLKITDVAFADSGEYTCFARNKL 293 (745)
Q Consensus 245 -~p-~~~i~W~~~--~~~~~-------------~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~~~n~~ 293 (745)
.+ .+.+.|++. +..+. ..++.....+ .|.|.+++.+|+|.|.|.+.+..
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 33 368999873 22111 2344443333 49999999999999999999875
No 450
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.60 E-value=1.5e-15 Score=141.52 Aligned_cols=169 Identities=17% Similarity=0.274 Sum_probs=104.4
Q ss_pred CeEEecCceeEe--eCCCeEEEEEEEeecC----CCeEEEEeCCEeccCCCCCCceeecCceEEEc------cCCCCCCE
Q psy11701 126 PYFTVEPEFINA--AEEETVTFECKASGLP----EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE------NLRKSDTG 193 (745)
Q Consensus 126 p~~~~~~~~~~v--~~G~~~~l~C~~~~~p----~~~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~------~v~~~d~G 193 (745)
|.+...|....+ .+|+++.|.|.+.|.+ .+.+.|+|++..+............++.|.+. ....+|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 444444433333 7999999999999865 34999999998776432111122233444443 33334499
Q ss_pred EEEEEEEeCCceEEEEEEEEE---eecCCeeeeCCCceEEecCceEEEEEEEeec-CC-CeEEEeeCCEEccCce---EE
Q psy11701 194 NYGCNATNSLGYVYKDVYVNV---LAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK-PEVNWIHNQKELTGGR---YT 265 (745)
Q Consensus 194 ~Y~C~~~~~~g~~~~~~~l~v---~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~---~~ 265 (745)
.|+|.|.|..+.......+.. ...+|.+...+.......|..++|.|.+.+. |. +.+.|++++..+.... ..
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 161 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV 161 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCE
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCce
Confidence 999999998775422223321 2235665544333222346679999999985 44 4899999998775321 12
Q ss_pred EeecCc------EEEcccCCCCCEEEEEEEEeCCc
Q psy11701 266 ILETGD------LKITDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 266 ~~~~~~------l~i~~~~~~d~G~Y~C~~~n~~g 294 (745)
...+++ |.|......|.|.|+|.|.|...
T Consensus 162 ~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 162 LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 233443 44444444679999999998754
No 451
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.60 E-value=1.9e-14 Score=135.64 Aligned_cols=162 Identities=21% Similarity=0.369 Sum_probs=109.4
Q ss_pred cCceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc------C----------CCCCCceee------cCceEEE
Q psy11701 131 EPEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS------Q----------APPNPRRKV------GPNRITI 184 (745)
Q Consensus 131 ~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~------~----------~~~~~~~~~------~~~~L~i 184 (745)
.|....+.+|++++|.|.+.+.+ .+.+.|+|.. .... . .....++.. ....|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 34556789999999999998743 5699999732 1110 0 001123322 1236999
Q ss_pred ccCCCCCCEEEEEEEEeCC--ceEEEEEEEEEee---cCCeee-eCCCceEEecCceEEEEEEEee-cCC--CeEEEeeC
Q psy11701 185 ENLRKSDTGNYGCNATNSL--GYVYKDVYVNVLA---HAPEIT-EAPKDEYTVDGKTVVLTCRVFG-APK--PEVNWIHN 255 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~--g~~~~~~~l~v~~---~~p~~~-~~~~~~~v~~g~~~~l~C~~~~-~p~--~~i~W~~~ 255 (745)
.+++.+|+|.|.|.+.+.. ........|.|.. .+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|+++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~ 163 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSES 163 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEEC
Confidence 9999999999999999763 1222234566642 344444 333333 68999999999998 665 38999998
Q ss_pred CEEcc-----------CceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 256 QKELT-----------GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 256 ~~~~~-----------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
+..+. ++.+.. ...|.|......|.|.|+|.|.|..+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 164 GQGVTARNFPPSQDASGDLYTT--SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp STTCEEEECCCEECSSSSCEEE--EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CEECceEEcCceeeCCCCcEEE--EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 86552 222222 2358999999999999999999987653
No 452
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.60 E-value=1.2e-14 Score=137.85 Aligned_cols=176 Identities=14% Similarity=0.164 Sum_probs=116.0
Q ss_pred EeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--E---ec---C-----------CCCCeEeccC----CcEEEE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--V---PI---N-----------PSDRISQGNY----GKSLII 91 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~---~i---~-----------~~~~~~~~~~----~~~L~i 91 (745)
+..|..+.+.+|++|+|.|.+.+. ....+.|+|.. . .+ . ..+|+.+... ..+|+|
T Consensus 4 v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (230)
T 3n9g_H 4 LVQSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMEL 83 (230)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EEecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEE
Confidence 445566889999999999999753 34589999731 1 11 0 0245554221 236999
Q ss_pred ccCCCCCCEEEEEEEEeCC-------eeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEee-cC-CCeEE
Q psy11701 92 KHVEFSDQGSYTCEVSNGV-------GEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASG-LP-EPEIH 158 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~-------g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p-~~~v~ 158 (745)
.+++.+|+|.|.|.+.+.. .........|.|. .+|.+...+....+.+|+.++|.|.+.+ .| .+.+.
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 163 (230)
T 3n9g_H 84 SSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 163 (230)
T ss_dssp CSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEE
T ss_pred CCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEE
Confidence 9999999999999998743 1112233456664 3555554444445678999999999987 44 34799
Q ss_pred EEeCCEeccCCCCCC-ce------eecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy11701 159 WVHNGKPISQAPPNP-RR------KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215 (745)
Q Consensus 159 W~~~g~~~~~~~~~~-~~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v~ 215 (745)
| ++..+....... .. ....+.|.|.....+| |.|+|.|.|..+.......+.|.
T Consensus 164 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 164 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred E--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 9 555443211100 11 1112478999999999 99999999988776666665554
No 453
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.59 E-value=1.7e-15 Score=144.03 Aligned_cols=177 Identities=13% Similarity=0.173 Sum_probs=111.9
Q ss_pred EeeccceeEecCCcEEEEEEEeecC--CCee--EEEECC--E---ec-----CC-----------CCCeEecc----CCc
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTP--LPQT--IWSKDG--V---PI-----NP-----------SDRISQGN----YGK 87 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v--~W~~~~--~---~i-----~~-----------~~~~~~~~----~~~ 87 (745)
+..+..+.+.+|++|+|.|.+.+.+ ...+ .|+|.. . .+ .. .+|+.+.. ...
T Consensus 4 v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 83 (232)
T 3qhz_H 4 LRESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQV 83 (232)
T ss_dssp EEEECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEE
T ss_pred EEcCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEE
Confidence 4556667899999999999997642 2445 999832 1 11 00 13555432 223
Q ss_pred EEEEccCCCCCCEEEEEEEEeCCe-------eeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEeec-C-C
Q psy11701 88 SLIIKHVEFSDQGSYTCEVSNGVG-------EAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASGL-P-E 154 (745)
Q Consensus 88 ~L~i~~~~~~d~G~Y~C~~~~~~g-------~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p-~ 154 (745)
+|.|.+++.+|+|.|.|.+.+..+ ........|.|. .+|.+...+....+..|+.++|.|.+.+. | .
T Consensus 84 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~ 163 (232)
T 3qhz_H 84 VLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 163 (232)
T ss_dssp EEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSC
T ss_pred EEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCC
Confidence 799999999999999999986521 112233456665 45666544444456789999999999874 4 2
Q ss_pred CeEEEEeCCEeccCCCCC-----CceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 155 PEIHWVHNGKPISQAPPN-----PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 155 ~~v~W~~~g~~~~~~~~~-----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
..+.|+++|..+...... .......+.|.|......| |.|+|.|.|..+.......|.+
T Consensus 164 ~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 164 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred eEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 378899998644211111 0111122478899998888 9999999999877666655544
No 454
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.59 E-value=1.6e-14 Score=137.02 Aligned_cols=171 Identities=18% Similarity=0.292 Sum_probs=110.5
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Ee---cc----------CCCCCCceeec------CceEEEccCC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KP---IS----------QAPPNPRRKVG------PNRITIENLR 188 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~---~~----------~~~~~~~~~~~------~~~L~i~~v~ 188 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|.. .. +. ......++... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4556789999999999998754 5689999842 21 10 00112333321 2389999999
Q ss_pred CCCCEEEEEEEEeCCc------eEEEEEEEEEee---cCCeeeeCCCceEEecC-ceEEEEEEEeec-CCC-eEEEee-C
Q psy11701 189 KSDTGNYGCNATNSLG------YVYKDVYVNVLA---HAPEITEAPKDEYTVDG-KTVVLTCRVFGA-PKP-EVNWIH-N 255 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g------~~~~~~~l~v~~---~~p~~~~~~~~~~v~~g-~~~~l~C~~~~~-p~~-~i~W~~-~ 255 (745)
.+|+|.|.|.+.+..+ .......|.|.. .+|.+........+..| +.++|.|.+.+. |.+ .+.|++ +
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 9999999999984221 112235677754 23554432212234578 999999999886 765 999999 8
Q ss_pred CEEccC----------ceEEEeecCcEEEcccCC--CCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 256 QKELTG----------GRYTILETGDLKITDVAF--ADSGEYTCFARNKLGTAQGSGSLTV 304 (745)
Q Consensus 256 ~~~~~~----------~~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~n~~g~~~~~~~l~v 304 (745)
+..+.. +.+. ..+.|.|..... +|.|.|+|.|.|..+.......+.|
T Consensus 167 g~~l~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 167 NSDISSTRGFPSVLRGGKYA--ATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp SCEECCEEECCCEEETTEEE--EEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred CCceeeEEECCccccCCcEE--EEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 876643 1111 123588888876 7899999999999887655554444
No 455
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.59 E-value=1.1e-14 Score=122.59 Aligned_cols=108 Identities=21% Similarity=0.334 Sum_probs=86.3
Q ss_pred CcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCCCC--CCCceeeEEEEEEEcCCcccCCcccccccccCCCcceee
Q psy11701 492 SEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKPEQ--PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568 (745)
Q Consensus 492 S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p~~--~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (745)
|..+.++|.+++|. +|.++++...+.++|.|+|++|.. .+|.|.+|.|+|+..+...+..+....... .+....+.
T Consensus 3 S~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 81 (122)
T 1va9_A 3 SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKA-TGDSEVYT 81 (122)
T ss_dssp CCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCC-CSSEEEEE
T ss_pred CCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEec-CCceeEEE
Confidence 44566888888886 789999999999999999999986 688999999999987754433322111111 34568999
Q ss_pred ecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 569 l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
|.+|+|++.|.|+|.|+|..|.|++|..+...
T Consensus 82 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 113 (122)
T 1va9_A 82 LDNLKKFAQYGVVVQAFNRAGTGPSSSEINAT 113 (122)
T ss_dssp EESCCSSCCEEEEEEEEETTEECCCCCCEECC
T ss_pred eCCCCCCCEEEEEEEEEcCCCCCCCccCEEEE
Confidence 99999999999999999999999998876544
No 456
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.59 E-value=1.1e-14 Score=139.40 Aligned_cols=177 Identities=15% Similarity=0.179 Sum_probs=113.9
Q ss_pred EeeccceeEecCCcEEEEEEEeec--CCCeeEEEEC--CEe---c---C-----------CCCCeEecc----CCcEEEE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKD--GVP---I---N-----------PSDRISQGN----YGKSLII 91 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~--~~~---i---~-----------~~~~~~~~~----~~~~L~i 91 (745)
+..|..+.+.+|++|+|.|.+.+. +...+.|+|. +.. + . ..+|+.+.. ...+|+|
T Consensus 3 l~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (248)
T 3u2s_H 3 LVESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQM 82 (248)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred eecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEE
Confidence 456778889999999999999763 3458999973 211 1 0 124555432 2236999
Q ss_pred ccCCCCCCEEEEEEEEeCC---------------------eeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEE
Q psy11701 92 KHVEFSDQGSYTCEVSNGV---------------------GEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFE 146 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~---------------------g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~ 146 (745)
.+++.+|+|.|.|.+.+.. .........|.|. .+|.+...+....+..|+.++|.
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~ 162 (248)
T 3u2s_H 83 NSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALG 162 (248)
T ss_dssp CSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEE
T ss_pred CCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEE
Confidence 9999999999999998631 1112233566665 35666555454456679999999
Q ss_pred EEEee-cC-CCeEEEEeCCEeccCCCCC-----CceeecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 147 CKASG-LP-EPEIHWVHNGKPISQAPPN-----PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 147 C~~~~-~p-~~~v~W~~~g~~~~~~~~~-----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
|.+.+ .| ...+.|+++|..+...... .......+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 163 C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 163 CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 99987 45 3589999998654311111 0111122468888888888 9999999998776655544433
No 457
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.59 E-value=6.9e-15 Score=121.48 Aligned_cols=105 Identities=21% Similarity=0.319 Sum_probs=85.6
Q ss_pred CCCCCCcceEEeCCCCCCC-CCCceeEEEcCCceEEEEeeCC--CCCCCceeeEEEEEEEcCCcccCCcccccccccCCC
Q psy11701 487 YNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~-~p~~~~~~~~~~~~i~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 563 (745)
|.|++|..+.++|.+++|+ +|.++++.. +.++|.|+|++| ...+|.|++|+|+|+..+.... .. + ...
T Consensus 1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~-~~------~-~~~ 71 (117)
T 1wj3_A 1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV-QV------L-NTN 71 (117)
T ss_dssp CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSC-EE------E-EES
T ss_pred CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCC-eE------E-eCC
Confidence 6788999999999999997 678888877 788999999999 4589999999999998764432 11 1 233
Q ss_pred cceeeecCCCCCccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 564 ~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
...+.+. |.+++.|.|+|.|+|.+|.|++|+.+.+.+
T Consensus 72 ~~~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T 108 (117)
T 1wj3_A 72 KTSAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108 (117)
T ss_dssp SSEEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECC
T ss_pred CcEEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEc
Confidence 4577887 999999999999999999999997765443
No 458
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.59 E-value=1.2e-14 Score=116.31 Aligned_cols=92 Identities=23% Similarity=0.393 Sum_probs=77.7
Q ss_pred cCeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCCEeccCCCCCCc-eee--cCceEEEccCCCCCCEEEEEEEEe
Q psy11701 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKV--GPNRITIENLRKSDTGNYGCNATN 201 (745)
Q Consensus 125 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g~~~~~~~~~~~-~~~--~~~~L~i~~v~~~d~G~Y~C~~~~ 201 (745)
||.|...|.+..+.+|+++.|.|.+.|.|.+.++|+|||+.+........ ... ....|.|.+++.+|+|.|+|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 67888889999999999999999999999999999999999875432211 111 234799999999999999999999
Q ss_pred CCceEEEEEEEEEee
Q psy11701 202 SLGYVYKDVYVNVLA 216 (745)
Q Consensus 202 ~~g~~~~~~~l~v~~ 216 (745)
..|.....+.|.|..
T Consensus 85 ~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 85 EFGSDSATVNIHIRS 99 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEEEEE
Confidence 999999888888863
No 459
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.59 E-value=1.7e-15 Score=143.90 Aligned_cols=163 Identities=13% Similarity=0.204 Sum_probs=108.5
Q ss_pred CceeE-eeCCCeEEEEEEEeec---CCC-eEEEEeCCEeccCCCCCC------ceeecCceEEEccCCCCCCEEEEEEEE
Q psy11701 132 PEFIN-AAEEETVTFECKASGL---PEP-EIHWVHNGKPISQAPPNP------RRKVGPNRITIENLRKSDTGNYGCNAT 200 (745)
Q Consensus 132 ~~~~~-v~~G~~~~l~C~~~~~---p~~-~v~W~~~g~~~~~~~~~~------~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 200 (745)
|.... +.+|++++|.|.+.+. |.+ .|.|+|++..+....... ......+.|.|.++..+|+|.|+|.+.
T Consensus 23 p~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~ 102 (239)
T 1i1c_A 23 PKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVN 102 (239)
T ss_dssp CCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred CChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEe
Confidence 33333 7899999999999886 765 999999987654221110 111223579999999999999999999
Q ss_pred eCCceEEEEEEEE---EeecCCeeeeCCCceEEecCceEEEEEEEeec-CC-CeEEEeeCCEEccCce---EEEeecCc-
Q psy11701 201 NSLGYVYKDVYVN---VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PK-PEVNWIHNQKELTGGR---YTILETGD- 271 (745)
Q Consensus 201 ~~~g~~~~~~~l~---v~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~---~~~~~~~~- 271 (745)
+..+.......+. ....+|.+...+.......|+.++|.|.+.+. |. ..+.|+++|..+.... .....+++
T Consensus 103 ~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~ 182 (239)
T 1i1c_A 103 SGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSY 182 (239)
T ss_dssp CSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCE
T ss_pred cccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCE
Confidence 9877532222221 12246666555444333458899999999985 44 4899999998875421 12233444
Q ss_pred -----EEEcccCCCCCEEEEEEEEeCCc
Q psy11701 272 -----LKITDVAFADSGEYTCFARNKLG 294 (745)
Q Consensus 272 -----l~i~~~~~~d~G~Y~C~~~n~~g 294 (745)
|.|.....+|.|.|+|.|.|...
T Consensus 183 ~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 183 FLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp EEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 34444444578999999998764
No 460
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.59 E-value=5.6e-14 Score=129.87 Aligned_cols=186 Identities=13% Similarity=0.060 Sum_probs=118.1
Q ss_pred CCCCCceeEEee-cCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCC---------CceeEEEEccCceeEEEeccccc
Q psy11701 403 EAPSNFTLIQVI-DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE---------GSIRELIVNKGESTTTEVDKFVP 472 (745)
Q Consensus 403 ~~P~~~~~~~~~-~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~L~~ 472 (745)
+.|.++.+.. . ....++++|+++......+ ..|.+.|+.....- ...............+.+..+..
T Consensus 2 ~~~~nlsC~~-~~~~~~~~C~W~~g~~~~l~t--~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~ 78 (206)
T 3v6o_A 2 DVNINISCET-DGYLTKMTCRWSTSTIQSLAE--STLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFL 78 (206)
T ss_dssp --CCCCEEEE-CTTSSCEEEEECCCC----------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCT
T ss_pred CCCEEEEEEE-CCCCcEEEEEecCCCcCCccc--ccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHh
Confidence 4578888876 5 4689999999965433322 16888777643100 00122223234556788888888
Q ss_pred CcceeEEEEEecCCCCCCCCcceEEe-CCCCCCCCCCceeEEEc-CCceEEEEeeCCCCCCCceeeEEEEEEEcCC-ccc
Q psy11701 473 ASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPL-GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG-TKV 549 (745)
Q Consensus 473 ~~~Y~~~V~a~n~~G~g~~S~~~~~~-t~~~~P~~p~~~~~~~~-~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~-~~~ 549 (745)
.+.|.|+|.|.|..|.+. |..+.+. .....|.||.++.+... ..+.+.|+|++|.... .+..|.|+|+..+. ..|
T Consensus 79 ~~~Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~-~~l~yev~y~~~~~~~~w 156 (206)
T 3v6o_A 79 LSGYTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPE-NNLQFQIRYGLSGKEVQW 156 (206)
T ss_dssp TSCEEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC---------CEEEEEEEEESSSSCCC
T ss_pred cccEEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCC-CcEEEEEEEEECCCCCce
Confidence 899999999999999865 4445554 34457889999988765 5789999999986533 46899999998752 232
Q ss_pred CCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCCCCCCcceee
Q psy11701 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598 (745)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~ 598 (745)
.... ........+.+.+|.|++.|.|+|+|.+..|.|.+|+++.
T Consensus 157 ~~~~-----~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeWS~ 200 (206)
T 3v6o_A 157 KMYE-----VYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSN 200 (206)
T ss_dssp EEEE-----ECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCCCC
T ss_pred EEEe-----cccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCCCc
Confidence 2211 1122335689999999999999999999989999888764
No 461
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.58 E-value=1.3e-14 Score=136.83 Aligned_cols=185 Identities=14% Similarity=0.138 Sum_probs=118.6
Q ss_pred eccCCCCCCceeEEeecCceeEEEEEeCCCCCccee-eeeEEEEEEeccCCC--CceeEEEE---ccCceeEEEeccccc
Q psy11701 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH-FRGYKVQTWTEKDGE--GSIRELIV---NKGESTTTEVDKFVP 472 (745)
Q Consensus 399 ~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~-i~~y~i~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~~ 472 (745)
..||..|+++.+.. ....+++++|+++. ..+.. ...|.+.|+...... ........ .......+...+|.+
T Consensus 27 ~~pP~~P~~l~C~~-~~~~~~~c~W~p~~--~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~ 103 (236)
T 1axi_B 27 TNSSGEPKFTKCRS-PERETFSCHWTDEV--HHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSI 103 (236)
T ss_dssp -----CCCEEEEEB-SSSSCEEEEECCC----------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCS
T ss_pred CCCCCCCcCCeEEe-CCCCEEEEEecCCC--CCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcc
Confidence 36889999998876 78899999999742 22222 247888887653221 11111110 012345566778899
Q ss_pred CcceeEEEEEecCCCCCCCCcceEEe-CCCCCCCCCCceeE--EEcCC----ceEEEEeeCCCC---CCC-ceeeEEEEE
Q psy11701 473 ASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEA--IPLGS----SAFYLKWVKPEQ---PNG-VLMGYKIKY 541 (745)
Q Consensus 473 ~~~Y~~~V~a~n~~G~g~~S~~~~~~-t~~~~P~~p~~~~~--~~~~~----~~i~l~W~~p~~---~~g-~i~~Y~v~~ 541 (745)
.+.|.|+|.| | .+ .+....+. +....|.||.++.+ ...+. ..+.|+|++|.. .+| .+..|.|+|
T Consensus 104 ~~~Y~~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry 178 (236)
T 1axi_B 104 AIPYCIKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQY 178 (236)
T ss_dssp SSEEEEEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEE
T ss_pred cceEEEEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEE
Confidence 9999999999 8 22 23334443 33457889999953 33332 349999999863 255 689999999
Q ss_pred EEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEEEEEecCC--CCCCcceee
Q psy11701 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG--DGAESKYLF 598 (745)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~n~~G--~g~~S~~~~ 598 (745)
+..+...|.... ....+++.|.+|.|++.|.|+|+|.+..| .|.+|..+.
T Consensus 179 ~~~~~~~w~~~~-------~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~ 230 (236)
T 1axi_B 179 KEVNETKWKMMD-------PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLY 230 (236)
T ss_dssp EETTCSSCEECC-------CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEE
T ss_pred EECCCCceEEEe-------ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEE
Confidence 987654332211 22458899999999999999999999988 666665543
No 462
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=5.8e-15 Score=122.65 Aligned_cols=107 Identities=24% Similarity=0.388 Sum_probs=90.2
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcce
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (745)
|.|+.|..+.++|.+++|++|.++++...+.++|.|+|++|.+ +.|.+|.|+|+..+...+.... ....+.
T Consensus 1 G~g~~S~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~--~~i~~Y~v~~~~~~~~~~~~~~-------~~~~~~ 71 (115)
T 1x5z_A 1 GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRS--DTIANYELVYKDGEHGEEQRIT-------IEPGTS 71 (115)
T ss_dssp CCCCCCCCCCCCCCSCCCCCCEEEEEECSSSSEEEEEEECCSC--CCCCEEEECBEESSSCCCBCCE-------ECSSSE
T ss_pred CCCCCCCCEEEECCCCCCCCCccCEeeeCCCCEEEEEEcCCCC--CCccEEEEEEEeCCCCCceEEe-------cCCCcE
Confidence 6788999999999999999999999999999999999999975 3899999999987654432111 334589
Q ss_pred eeecCCCCCccEEEEEEEEecCCCCCCcceeeeccc
Q psy11701 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602 (745)
Q Consensus 567 ~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~~~ 602 (745)
+.|.+|.|++.|.|+|.|+|..|.|++|..+...+.
T Consensus 72 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 107 (115)
T 1x5z_A 72 YRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM 107 (115)
T ss_dssp EEEECCCTTCEEEECEEEECSSCEEEECCCEEEECC
T ss_pred EEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecC
Confidence 999999999999999999999999999987765533
No 463
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.58 E-value=1.4e-15 Score=144.06 Aligned_cols=170 Identities=12% Similarity=0.216 Sum_probs=112.3
Q ss_pred cCeE-EecCceeEeeCCCeEEEEEEEeec-CC-C-eEEEEeCCEec-cCCCCCC-----ceeecCceEEEccCCCCCCEE
Q psy11701 125 APYF-TVEPEFINAAEEETVTFECKASGL-PE-P-EIHWVHNGKPI-SQAPPNP-----RRKVGPNRITIENLRKSDTGN 194 (745)
Q Consensus 125 ~p~~-~~~~~~~~v~~G~~~~l~C~~~~~-p~-~-~v~W~~~g~~~-~~~~~~~-----~~~~~~~~L~i~~v~~~d~G~ 194 (745)
+|.+ ...|....+.+|++++|.|.+.|. |. + .++|+++|+.+ ....... ........|.|.++..+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 3443 345666677899999999999884 64 4 99999999877 3211000 000122469999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEE---eecCCeeeeC-CCceEEecCceEEEEEEEeec-C-CCeEEEeeCCEEccCceEE---
Q psy11701 195 YGCNATNSLGYVYKDVYVNV---LAHAPEITEA-PKDEYTVDGKTVVLTCRVFGA-P-KPEVNWIHNQKELTGGRYT--- 265 (745)
Q Consensus 195 Y~C~~~~~~g~~~~~~~l~v---~~~~p~~~~~-~~~~~v~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~~~--- 265 (745)
|+|.+.|..+.......+.+ ...+|.+... +....+ .+..++|.|.+.+. | .+.|.|+++|..+....+.
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 170 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTA 170 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECC
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCc
Confidence 99999998764322333322 1135555433 322222 35579999999986 4 3689999999987544311
Q ss_pred --Ee--------ec-C------cEEEcccCCCCCEEEEEEEEeCCce
Q psy11701 266 --IL--------ET-G------DLKITDVAFADSGEYTCFARNKLGT 295 (745)
Q Consensus 266 --~~--------~~-~------~l~i~~~~~~d~G~Y~C~~~n~~g~ 295 (745)
.. .+ + .|.|......|.|.|+|.|.|....
T Consensus 171 ~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 171 VLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 11 22 3 3777777778899999999987643
No 464
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.6e-14 Score=120.20 Aligned_cols=104 Identities=23% Similarity=0.390 Sum_probs=87.3
Q ss_pred CCCCcceEEeCC--CCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcce
Q psy11701 489 GPPSEIISFVTP--EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566 (745)
Q Consensus 489 g~~S~~~~~~t~--~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (745)
|++|..+.++|. .++|++|.++++...+.++|.|+|++|...+|.|.+|.|+|+..+...+.. + .....+
T Consensus 1 G~~S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-------~-~~~~~~ 72 (116)
T 1x5g_A 1 GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQD-------V-DVSSHS 72 (116)
T ss_dssp CCCCCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCC-------E-EECSSE
T ss_pred CCCccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEE-------E-ecCCce
Confidence 467777888884 378999999999999999999999999888889999999999876554321 1 234689
Q ss_pred eeecCCCCCccEEEEEEEEecCCCCCCcceeeec
Q psy11701 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 567 ~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
+.|.+|+|++.|.|+|.|+|..|.|++|..+.+.
T Consensus 73 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 106 (116)
T 1x5g_A 73 YTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVR 106 (116)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEE
Confidence 9999999999999999999999999998776544
No 465
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=5.9e-15 Score=123.13 Aligned_cols=104 Identities=26% Similarity=0.399 Sum_probs=86.1
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcce
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (745)
|.+..+....++|.+++|++|.++++...+.++|.|+|++|... |.|.+|.|+|+..+...+.... +.....+.
T Consensus 1 Gss~~~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~ 74 (118)
T 2yrz_A 1 GSSGSSGSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNGGELHRLN-----IPNPAQTS 74 (118)
T ss_dssp CCCCCCSCCTTSSSCSCCCCCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSSCCEEEEE-----ESCTTCCE
T ss_pred CCCCCCCcceeecCCCCCCCCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCCCceEEEE-----cCCCCcCE
Confidence 44556666778899999999999999999999999999999875 6999999999986654332211 22456789
Q ss_pred eeecCCCCCccEEEEEEEEecCCCCCCcce
Q psy11701 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596 (745)
Q Consensus 567 ~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~ 596 (745)
++|.+|.|++.|.|+|.|+|..|.|++|..
T Consensus 75 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 104 (118)
T 2yrz_A 75 VVVEDLLPNHSYVFRVRAQSQEGWGREREG 104 (118)
T ss_dssp EEEESCCTTCEEEEEEEEEESSCEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEcCCcCCCCcCC
Confidence 999999999999999999999999999873
No 466
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.57 E-value=1.7e-14 Score=120.78 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=85.8
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcC-CcccCCcccccccccCCCcc
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK-GTKVGPLLERLPYISDPTTT 565 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~ 565 (745)
|.+..+......+..++|++|.++++...+.++|.|+|+++.+++++|++|.|+|+... ...|...... + ....+
T Consensus 1 G~~~~~~~~~~~~~~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---~-~~~~~ 76 (121)
T 1x4z_A 1 GSSGSSGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---I-PPSRL 76 (121)
T ss_dssp CCCCCCCCCCCSSSCCCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---E-CTTCC
T ss_pred CCcccccceeccCcCCCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---c-CCCcC
Confidence 34444555556677789999999999999999999999987777789999999999875 3333322110 1 44668
Q ss_pred eeeecCCCCCccEEEEEEEEecCCCCCCcceee
Q psy11701 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598 (745)
Q Consensus 566 ~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~~ 598 (745)
.++|.+|.|++.|.|+|.|.|..|.|++|....
T Consensus 77 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~ 109 (121)
T 1x4z_A 77 SVEITGLEKGISYKFRVRALNMLGESEPSAPSR 109 (121)
T ss_dssp EEEEESCCTTCEEEEEEEEEETTEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCC
Confidence 999999999999999999999999999987654
No 467
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.57 E-value=2e-14 Score=140.90 Aligned_cols=170 Identities=17% Similarity=0.340 Sum_probs=114.6
Q ss_pred CeEEecCceeEeeCCCeEEEEEEEeecCCCeEEEEeCC--Eec--------------cCCCCCCceee-----cCceEEE
Q psy11701 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KPI--------------SQAPPNPRRKV-----GPNRITI 184 (745)
Q Consensus 126 p~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~g--~~~--------------~~~~~~~~~~~-----~~~~L~i 184 (745)
+.+...|....+.+|++++|.|.+.+.+.+.+.|+|++ ... .......++.. .+..|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 44566678888999999999999988788899999863 111 00011223322 1247999
Q ss_pred ccCCCCCCEEEEEEEEeCCc------eEEEEEEEEEee-----cCCeeeeC-CCceEEecCceEEEEEEEeec-CC-CeE
Q psy11701 185 ENLRKSDTGNYGCNATNSLG------YVYKDVYVNVLA-----HAPEITEA-PKDEYTVDGKTVVLTCRVFGA-PK-PEV 250 (745)
Q Consensus 185 ~~v~~~d~G~Y~C~~~~~~g------~~~~~~~l~v~~-----~~p~~~~~-~~~~~v~~g~~~~l~C~~~~~-p~-~~i 250 (745)
.+++.+|+|.|+|.+.+..+ .......|.|.. .+|.+... +....+.+|+.++|.|.+.+. |. +.+
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 184 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 184 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEE
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEE
Confidence 99999999999999998421 111224566653 25555433 333344579999999999987 43 589
Q ss_pred EEeeCCEEccCceEEE---------eecC------cEEEcccCCC-CCEEEEEEEEeCCce
Q psy11701 251 NWIHNQKELTGGRYTI---------LETG------DLKITDVAFA-DSGEYTCFARNKLGT 295 (745)
Q Consensus 251 ~W~~~~~~~~~~~~~~---------~~~~------~l~i~~~~~~-d~G~Y~C~~~n~~g~ 295 (745)
.|++++..+....... ..++ .|.|...... +.|.|+|.|.|....
T Consensus 185 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 185 SWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 9999998876443211 0222 3777777665 477899999997544
No 468
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.7e-14 Score=120.62 Aligned_cols=102 Identities=15% Similarity=0.329 Sum_probs=84.5
Q ss_pred eEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCC
Q psy11701 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574 (745)
Q Consensus 495 ~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 574 (745)
..+.+.+++|++|.++++...+.++|.|+|++|.+.++.|.+|.|+|+..+...+.... ........+.|.+|+|
T Consensus 9 ~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~~~i~~L~p 83 (119)
T 2ed7_A 9 PAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN-----TTQPGSLQLTVGNLKP 83 (119)
T ss_dssp SSCCCSSSSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE-----CCCTTCCEEEECSCCS
T ss_pred ccCCCCCCCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE-----eecCCceEEEeCCCCC
Confidence 44567788999999999999999999999999988889999999999987654332111 1134578999999999
Q ss_pred CccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 575 STKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 575 ~t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
++.|.|+|.|+|..|.|++|..+...+
T Consensus 84 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T 110 (119)
T 2ed7_A 84 EAMYTFRVVAYNEWGPGESSQPIKVAT 110 (119)
T ss_dssp SSEEEECCEEEESSCBCSCCCCEEEEC
T ss_pred CCEEEEEEEEEcCCccCCCcCCEEEEe
Confidence 999999999999999999998765543
No 469
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.57 E-value=2.3e-14 Score=138.12 Aligned_cols=166 Identities=17% Similarity=0.263 Sum_probs=111.3
Q ss_pred ecCceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc----CC----------CCCCceee------cCceEEEc
Q psy11701 130 VEPEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS----QA----------PPNPRRKV------GPNRITIE 185 (745)
Q Consensus 130 ~~~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~----~~----------~~~~~~~~------~~~~L~i~ 185 (745)
..|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. .. ....++.. ....|.|.
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 446677899999999999998866 5799999863 2110 00 01223322 23589999
Q ss_pred cCCCCCCEEEEEEEEeCCceE---EEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCE
Q psy11701 186 NLRKSDTGNYGCNATNSLGYV---YKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQK 257 (745)
Q Consensus 186 ~v~~~d~G~Y~C~~~~~~g~~---~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~ 257 (745)
+++.+|+|.|.|.+.+..+.. .....|.|.. .+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~ 170 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 170 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCC
Confidence 999999999999999864311 1235677764 24555433323346789999999999885 665 899999886
Q ss_pred EccC---ceE----EEeecCcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 258 ELTG---GRY----TILETGDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 258 ~~~~---~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
.+.. ... .......|.|.....+| |.|+|.|.|.....
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 171 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred cCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 5421 111 01123468898888877 99999999976553
No 470
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.56 E-value=5.6e-13 Score=130.83 Aligned_cols=244 Identities=20% Similarity=0.307 Sum_probs=138.7
Q ss_pred EEecCceEEEEEEEeecCCCeEEEeeCCEEccCceEEEeecCcEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecc
Q psy11701 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308 (745)
Q Consensus 229 ~v~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~p 308 (745)
.+..|++++|.|.+... . .|.|.+++..... ..+++|.|.++...|+|.|+|.+ .+.....+.+.|..++
T Consensus 17 ~~~~G~~v~l~C~~~~~-~-~i~W~~~~~~~~~-----~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~~~~ 86 (306)
T 3d85_D 17 PDAPGEMVVLTCDTPEE-D-GITWTLDQSSEVL-----GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLHKKE 86 (306)
T ss_dssp SSCCCEEEEEECSSSCC-S-SCEEEETTCCCCC-----EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEEEEE
T ss_pred cCccCCcEEEECCCCCC-C-cCEEEECCccccC-----CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEEecc
Confidence 34579999999998732 2 7999999875322 24678999999999999999999 3555555556565321
Q ss_pred ------eeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCee-ccC-------CCCCe-EEEc-----------C
Q psy11701 309 ------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP-IDF-------ESEPR-FVQS-----------N 362 (745)
Q Consensus 309 ------~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~-~~~-------~~~~~-~~~~-----------~ 362 (745)
.+...+... -+...|.|.+..... .+.+.|..+... +.. ..... .... .
T Consensus 87 ~~~~~t~i~~~~~~p----p~~~~lsC~~~~~~~-~~~C~W~pg~~~~l~~~~~~~r~~~~~~~~~C~~~~~~~~~c~v~ 161 (306)
T 3d85_D 87 DGIWSTDILKDQKEP----KNKTFLRCEAKNYSG-RFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGD 161 (306)
T ss_dssp TTEECCCSSCCCC-------CCCCCEEEBSSSSS-EEEEEEEESCCSSEEEEEEEEECSSSCEEEEECCCEEEEEEEC--
T ss_pred CCcceeeeecccCCC----CCCCcceEEcCCccc-CcEEEecCCCCCceeEEEEEEecCCCCcceECCCCCCCccceeec
Confidence 111000000 011234444333221 134444433220 000 00000 0000 0
Q ss_pred C----eEEE--EecC----CCCCCEEEEEEEEeCCceEEEEEEEEE--eccCCCCCCceeEEeecCceeEEEEEeCCCCC
Q psy11701 363 D----YSLT--VTKS----SELDSGQYTCRAQTELDFIEAQATLTV--QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430 (745)
Q Consensus 363 ~----~~l~--i~~~----~~~~~g~y~c~a~n~~g~~~~~~~l~v--~~pp~~P~~~~~~~~~~~~~v~l~W~~~~~~~ 430 (745)
. .++. .... .....+.++|.|.|..|.......+.+ .+.|.||.++.+........+.|+|+++..
T Consensus 162 ~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~-- 239 (306)
T 3d85_D 162 NKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDT-- 239 (306)
T ss_dssp CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTT--
T ss_pred CccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCC--
Confidence 0 0110 1111 122467789999999997666554433 367899999998762233789999999642
Q ss_pred cce----eeeeEEEEEEeccCCCCceeEEEEccCceeEEEecccccCcceeEEEEEecCCCCCCCCcceE
Q psy11701 431 LRG----HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496 (745)
Q Consensus 431 ~~~----~i~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~~~V~a~n~~G~g~~S~~~~ 496 (745)
.+. -.+.|+|+|+..+...+ .... .....++.| .+++.|+|+|+|.|..|.|.+|....
T Consensus 240 ~~~p~~~~~L~Y~vryr~~~~~~~--~~~~--~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 240 WSTPHSYFSLTFCVQVQGKSKREK--KDRV--FTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp SCSCTTTSCEEEEEEEECC--------CEE--EESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred CcCCCceeeEEEEEEEEECCCCcc--EEEe--eccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCC
Confidence 232 23689999987664322 2122 223345655 45999999999999999999988654
No 471
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.9e-14 Score=118.93 Aligned_cols=92 Identities=27% Similarity=0.395 Sum_probs=75.2
Q ss_pred EEeCCC-CCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCC
Q psy11701 496 SFVTPE-GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574 (745)
Q Consensus 496 ~~~t~~-~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 574 (745)
...+.+ ++|++|.++++...+ ++|.|+|++|.+.+|.|.+|.|+|+.... +.... ......++++|.+|+|
T Consensus 9 ~~~t~e~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~--~~~~~-----~~~~~~~~~~l~~L~p 80 (116)
T 2edb_A 9 ENDLDESQVPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP--YAETV-----RVDSKQRYYSIERLES 80 (116)
T ss_dssp SSSCBCSSCCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST--TSEEE-----EEETTCCEEEECSCCS
T ss_pred cccCCCCCCCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC--CeEEE-----EeCCCeeEEEeCCCCC
Confidence 344556 789999999999988 99999999998888999999999986321 11111 1145678999999999
Q ss_pred CccEEEEEEEEecCCCCCCcc
Q psy11701 575 STKYRIHLAGYTKAGDGAESK 595 (745)
Q Consensus 575 ~t~Y~~~V~a~n~~G~g~~S~ 595 (745)
++.|.|+|.|+|.+|.|+++.
T Consensus 81 ~t~Y~~~V~A~n~~G~g~~~~ 101 (116)
T 2edb_A 81 SSHYVISLKAFNNAGEGVPLY 101 (116)
T ss_dssp SSBEEEEEEEEETTEECSCEE
T ss_pred CCEEEEEEEEEeCCccCCCCc
Confidence 999999999999999999854
No 472
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=9e-15 Score=122.86 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=84.9
Q ss_pred CCCCCCcceEEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEc---CCcccCCcccccccccCCC
Q psy11701 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV---KGTKVGPLLERLPYISDPT 563 (745)
Q Consensus 487 G~g~~S~~~~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~---~~~~~~~~~~~~~~~~~~~ 563 (745)
|.+..+..+...+..++|++|.++++...+.++|.|+|.+|.+++++|++|.|+|+.. ....|...... .....
T Consensus 1 ~~~~~s~~~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~---~~~~~ 77 (124)
T 1wis_A 1 GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL---SNEPD 77 (124)
T ss_dssp CCCCCSCCCCSCCCCCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE---ESCTT
T ss_pred CCCCccccccccCCCCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE---ccCCC
Confidence 3444455566667778999999999999999999999999988888999999999873 22233221110 01356
Q ss_pred cceeeecCCCCCccEEEEEEEEecCCCCCCccee
Q psy11701 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597 (745)
Q Consensus 564 ~~~~~l~~L~p~t~Y~~~V~a~n~~G~g~~S~~~ 597 (745)
...+++.+|+|++.|.|||.|.|..|.|++|...
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~ 111 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPS 111 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCC
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCc
Confidence 6899999999999999999999999999998754
No 473
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.56 E-value=2.5e-14 Score=136.81 Aligned_cols=169 Identities=17% Similarity=0.272 Sum_probs=112.4
Q ss_pred eEEecCceeEeeCCCeEEEEEEEeec--CCCeEEEEeCC--Ee---cc-----------CCCCCCceee------cCceE
Q psy11701 127 YFTVEPEFINAAEEETVTFECKASGL--PEPEIHWVHNG--KP---IS-----------QAPPNPRRKV------GPNRI 182 (745)
Q Consensus 127 ~~~~~~~~~~v~~G~~~~l~C~~~~~--p~~~v~W~~~g--~~---~~-----------~~~~~~~~~~------~~~~L 182 (745)
.+...|....+.+|++++|.|.+.+. +...+.|+|+. .. +. ......++.. ....|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 35556788889999999999999875 56799999842 21 10 0002233332 23579
Q ss_pred EEccCCCCCCEEEEEEEEeCCc-----eE--EEEEEEEEeec------CCeeee-CCCceEEecCceEEEEEEEeec-CC
Q psy11701 183 TIENLRKSDTGNYGCNATNSLG-----YV--YKDVYVNVLAH------APEITE-APKDEYTVDGKTVVLTCRVFGA-PK 247 (745)
Q Consensus 183 ~i~~v~~~d~G~Y~C~~~~~~g-----~~--~~~~~l~v~~~------~p~~~~-~~~~~~v~~g~~~~l~C~~~~~-p~ 247 (745)
.|.+++.+|+|.|.|.+.+... .. .....|.|... +|.... .+....+.+|+.++|.|.+.+. |.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 9999999999999999997631 11 12356777642 233222 2344455679999999999987 54
Q ss_pred -CeEEEeeCCE-EccCce---EEE-----eecCcEEEcccCCCCCEEEEEEEEeCCceEE
Q psy11701 248 -PEVNWIHNQK-ELTGGR---YTI-----LETGDLKITDVAFADSGEYTCFARNKLGTAQ 297 (745)
Q Consensus 248 -~~i~W~~~~~-~~~~~~---~~~-----~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 297 (745)
+.+.|++++. .+.... ... .....|.|..... | |.|+|.|.|..+...
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~ 220 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNG 220 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGG
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCC
Confidence 6899999986 453221 011 0113588887764 4 999999999887643
No 474
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.56 E-value=3.4e-16 Score=146.60 Aligned_cols=171 Identities=14% Similarity=0.201 Sum_probs=112.9
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCC---CeeEEEECCEecCCCC-Ce---Eec---cCCcEEEEccCCCCCCEE
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPL---PQTIWSKDGVPINPSD-RI---SQG---NYGKSLIIKHVEFSDQGS 101 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~---~~v~W~~~~~~i~~~~-~~---~~~---~~~~~L~i~~~~~~d~G~ 101 (745)
+|..++..|....+.+|++++|.|.+.|.+. +.|.| ++.++.... .. ... .....|.|.+++.+|.|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 4677777788888999999999999988754 68999 444443210 00 000 012368898999999999
Q ss_pred EEEEEEeCCeee-EEEEEE-EEEEecCeEEecC-ceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEeccCCCC--CCc
Q psy11701 102 YTCEVSNGVGEA-KSYSID-LSVLAAPYFTVEP-EFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPISQAPP--NPR 174 (745)
Q Consensus 102 Y~C~~~~~~g~~-~~~~~~-l~V~~~p~~~~~~-~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~~~~~--~~~ 174 (745)
|+|.+.+..+.. ....+. +.+..+|.+.+.+ ....+.+|+.++|.|.+.|. |. +.|+|+|||..+..... ...
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 160 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWAS 160 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCC
T ss_pred EEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCC
Confidence 999999875532 222222 1335677765543 33346789999999999984 54 49999999998864311 111
Q ss_pred eee---cCce------EEEccCCCCCCEEEEEEEEeCCc
Q psy11701 175 RKV---GPNR------ITIENLRKSDTGNYGCNATNSLG 204 (745)
Q Consensus 175 ~~~---~~~~------L~i~~v~~~d~G~Y~C~~~~~~g 204 (745)
... .+++ |.|.....+|.|.|+|.|.|...
T Consensus 161 ~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 161 RQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred cccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 222 3443 33444333558999999998753
No 475
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=1.8e-14 Score=117.16 Aligned_cols=96 Identities=17% Similarity=0.273 Sum_probs=78.6
Q ss_pred eCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCcc
Q psy11701 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 498 ~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
+|...+|++|.++++...+.++|.|+|++|.++|++|.+|.|+|+..... + .. ......+++.|.+|.|++.
T Consensus 2 tt~~~~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~-~---~~----~~~~~~~~~~v~~L~p~t~ 73 (106)
T 1x4x_A 2 SSGSSGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGS-M---QI----CYCGPGLSYEIKGLSPATT 73 (106)
T ss_dssp CSSCCSCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTS-C---CE----EEEESCSEEEEESCCSSCE
T ss_pred CCCCCCcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCc-e---EE----EEeCCcceEEEcCCCCCCE
Confidence 35678899999999999999999999999988556999999999865422 1 11 1133557899999999999
Q ss_pred EEEEEEEEecCCCCCCcceeeecc
Q psy11701 578 YRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
|.|+|.|.|..|.|++|..+...+
T Consensus 74 Y~frV~A~n~~G~g~~S~~v~~~T 97 (106)
T 1x4x_A 74 YYCRVQALSVVGAGPFSEVVACVT 97 (106)
T ss_dssp EEEEEEEECSSCCCCBCCCEEEEC
T ss_pred EEEEEEEEcCCcCCCCcCCEEEEC
Confidence 999999999999999988765543
No 476
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=1.3e-14 Score=119.52 Aligned_cols=100 Identities=29% Similarity=0.445 Sum_probs=83.4
Q ss_pred EEeCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCC
Q psy11701 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575 (745)
Q Consensus 496 ~~~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 575 (745)
.++|.+++|++|.++++...+.++|.|+|++|.+.+|.|.+|.|+|+..+..... +. ........+.|.+|.|+
T Consensus 3 ~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~-----~~~~~~~~~~i~~L~p~ 76 (111)
T 1x5l_A 3 SGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS-YS-----TLKAVTTRATVSGLKPG 76 (111)
T ss_dssp CCCCSCCCCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS-CE-----EEEESSSEEEECSCCTT
T ss_pred eEEcCCCCCCCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCcee-EE-----EecCCCCEEEEcCCCCC
Confidence 4678889999999999988899999999999988889999999999987532221 11 11445689999999999
Q ss_pred ccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 576 TKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 576 t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
+.|.|+|.|+|..|.|++|..+.+.+
T Consensus 77 t~Y~~~V~A~n~~G~g~~S~~~~~~T 102 (111)
T 1x5l_A 77 TRYVFQVRARTSAGCGRFSQAMEVET 102 (111)
T ss_dssp CEEEECEEEEETTEECCCCCCEEEEC
T ss_pred CEEEEEEEEEeCCcCCCCcccEEEEc
Confidence 99999999999999999998775543
No 477
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=4.7e-14 Score=116.75 Aligned_cols=99 Identities=24% Similarity=0.276 Sum_probs=84.2
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccC--CcEEEEccCCCCCCEEEEEEEEe
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
..|..+...+.+..+.+|++++|.|.+.|.|.+.+.|+|++..|....++.+... ...|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 3566677889999999999999999999999999999999999987777765432 45899999999999999999999
Q ss_pred CCeeeEEEEEEEEEEecCeEEe
Q psy11701 109 GVGEAKSYSIDLSVLAAPYFTV 130 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~~~~ 130 (745)
..|... ..+.|.|...|....
T Consensus 85 ~~g~~~-~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 85 KLGSRQ-AQVNLTVVDKPDPPA 105 (114)
T ss_dssp SSCEEE-CCEEEEEECSCSCCC
T ss_pred CCCcEE-EEEEEEEECCCCCCC
Confidence 988766 678899988775433
No 478
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.55 E-value=1.5e-14 Score=139.59 Aligned_cols=174 Identities=14% Similarity=0.183 Sum_probs=108.0
Q ss_pred EeeccceeEecCCcEEEEEEEeecC--CCeeEEEECC--Ee---c---C----------CCCCeEecc----CCcEEEEc
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTP--LPQTIWSKDG--VP---I---N----------PSDRISQGN----YGKSLIIK 92 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~---i---~----------~~~~~~~~~----~~~~L~i~ 92 (745)
+..+..+.+.+|++|+|.|.+.+.+ ...+.|+|.. .. + . ...|+.+.. ...+|.|.
T Consensus 4 v~~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (263)
T 3iu4_H 4 LKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMN 83 (263)
T ss_dssp EEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEEC
T ss_pred EECCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEEC
Confidence 3455567899999999999997543 4589999732 11 1 0 024555422 22369999
Q ss_pred cCCCCCCEEEEEEEEeCC-----e-e-eEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEee-cCC-CeEEE
Q psy11701 93 HVEFSDQGSYTCEVSNGV-----G-E-AKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASG-LPE-PEIHW 159 (745)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~-----g-~-~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p~-~~v~W 159 (745)
+++.+|+|.|.|.+.+.. + . .......|.|. .+|.+...+....+.+|+.++|.|.+.+ .|. +.++|
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 84 SLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp SCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred CCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE
Confidence 999999999999998753 1 1 11122456664 3555554333334568999999999987 443 68999
Q ss_pred EeCCEeccCCCC-CCcee------ecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy11701 160 VHNGKPISQAPP-NPRRK------VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213 (745)
Q Consensus 160 ~~~g~~~~~~~~-~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~ 213 (745)
++..+..... ..... ...+.|.|.....+| |.|+|.|.|..+.......+.
T Consensus 164 --~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 164 --NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp --GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred --CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 4443321110 00111 112478888888888 999999999887655444433
No 479
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1e-14 Score=122.96 Aligned_cols=117 Identities=19% Similarity=0.188 Sum_probs=88.7
Q ss_pred EEEEEecCCCCCCcceeeecccCCC-----CCCCCCCCCCcceeEEEeecCccccCCCcceEEEEEeccCCCCCCCccCc
Q psy11701 581 HLAGYTKAGDGAESKYLFYVPFKNP-----DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655 (745)
Q Consensus 581 ~V~a~n~~G~g~~S~~~~~~~~~~~-----~~~~~~~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~~~~~~~~~~~~ 655 (745)
+|.|+|..|.|++|..+...+.... .++.+....++++.|+|+++.....+|.|.+|.|+|+.......
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~------ 76 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGE------ 76 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCC------
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcc------
Confidence 5789999999999876644433221 12222334568899999988876688999999999986522110
Q ss_pred cccccceEEeccCCCcceEEEEEEEEeeeecCCCCeEEEEEecCCCcEEEecccccCCcceeEEEEecCcccCCCCcceE
Q psy11701 656 LDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 735 (745)
Q Consensus 656 ~~~~~~~~~~~~l~~~~~Y~i~v~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~A~~~~G~g~~s~~~~ 735 (745)
........+++.|.+|+|++.|.|+|+|.|.+|.|++|+++.
T Consensus 77 --------------------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~ 118 (124)
T 2ed9_A 77 --------------------------------------METLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYT 118 (124)
T ss_dssp --------------------------------------EEEECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEE
T ss_pred --------------------------------------eEEecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEE
Confidence 001246788899999999999999999999999999999999
Q ss_pred EeCCCC
Q psy11701 736 FVTPEG 741 (745)
Q Consensus 736 ~~t~~~ 741 (745)
++|++.
T Consensus 119 ~~T~ed 124 (124)
T 2ed9_A 119 AETPEN 124 (124)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999873
No 480
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=8.2e-14 Score=112.08 Aligned_cols=92 Identities=25% Similarity=0.273 Sum_probs=78.0
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEe---ccCCcEEEEccCCCCCCEEEEEEEEe
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ---GNYGKSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
.|+.+...+.+..+.+|++++|.|.+.|.|.+.+.|+|++..+....++.. .....+|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 355667788999999999999999999999999999999999987766553 23345899999999999999999999
Q ss_pred CCeeeEEEEEEEEEEe
Q psy11701 109 GVGEAKSYSIDLSVLA 124 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~ 124 (745)
..|... ..+.|.|..
T Consensus 84 ~~g~~~-~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETS-SHAFLLVQA 98 (99)
T ss_dssp TTEEEE-EEEEEEEEC
T ss_pred CCCcEE-EEEEEEEec
Confidence 998877 567777753
No 481
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=1.5e-14 Score=117.36 Aligned_cols=97 Identities=21% Similarity=0.306 Sum_probs=77.1
Q ss_pred CCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCc-eeeEEEEEEEcCCcccCCc-ccccccccCCCcceeeecCCCCCcc
Q psy11701 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LMGYKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 500 ~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~-i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
.+++|++|.++.+...+.+ +.|+|++|...||. |.+|.|+|+..+...|... .... . ....+.++|.+|+|++.
T Consensus 3 ~~~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~--~-~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 3 HMDTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK--E-ASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCCCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHH--H-HHHHSEEEECSCCTTCE
T ss_pred CCCCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEcc--c-cCCccEEEECCCCCCCE
Confidence 4678888999999888888 99999999877776 9999999998775533211 1100 1 22468899999999999
Q ss_pred EEEEEEEEecCCCCCCcceeeec
Q psy11701 578 YRIHLAGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~~~~ 600 (745)
|.|+|.|+|.+|.|++|+...+.
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~~~~ 101 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAASEFK 101 (105)
T ss_dssp EEEEEEEEETTEECCCCCCEEEE
T ss_pred EEEEEEEEcCCccCCCcCCEeeE
Confidence 99999999999999999876544
No 482
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=4.3e-14 Score=131.11 Aligned_cols=164 Identities=13% Similarity=0.190 Sum_probs=105.8
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--Ee---c-------CCCCCeEecc-----CCcEEEEccCCCCCC
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VP---I-------NPSDRISQGN-----YGKSLIIKHVEFSDQ 99 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~---i-------~~~~~~~~~~-----~~~~L~i~~~~~~d~ 99 (745)
...|..+.+.+|++++|.|.+.+.+ +.+.|+|.. .. | ....|+.+.. ...+|.|.+++.+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp EESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred EECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 4456778899999999999997654 489999842 21 1 0235665542 234899999999999
Q ss_pred EEEEEEEEeCCe---------e-eEEEEEEEEEEecCeEEecCceeEeeCCCeEEEEEEEeec-CC-CeEEEEeCCEecc
Q psy11701 100 GSYTCEVSNGVG---------E-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL-PE-PEIHWVHNGKPIS 167 (745)
Q Consensus 100 G~Y~C~~~~~~g---------~-~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-p~-~~v~W~~~g~~~~ 167 (745)
|.|.|.+.+..+ . .......|.|...+.....| ...+..+ .+.|.|.+.+. |. +.++|+++ ..+.
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~ 160 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIV 160 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEE
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Cccc
Confidence 999999987532 1 11123567776432211222 2222222 27999999874 54 69999999 6665
Q ss_pred CCCCCCceeecCceEEEccCCC-CCCEEEEEEEEeCCce
Q psy11701 168 QAPPNPRRKVGPNRITIENLRK-SDTGNYGCNATNSLGY 205 (745)
Q Consensus 168 ~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~~g~ 205 (745)
... .......++.+.+..... +|.|.|+|.|.|..+.
T Consensus 161 ~~~-~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 161 EFD-PAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp ECC-CEEEECTTSSEEEEECEEESSTTTCEEEEEETTEE
T ss_pred CCc-cceEEcCCCcEEEEEeecccCCCcEEEEEEECCcc
Confidence 321 111113345666655544 6789999999998764
No 483
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.54 E-value=1.9e-13 Score=121.10 Aligned_cols=157 Identities=17% Similarity=0.189 Sum_probs=109.1
Q ss_pred EeeccceeEecCCcEEEEEEEeecCCCe-eEEEE--CCEecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCeee
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGTPLPQ-TIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~p~~~-v~W~~--~~~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 113 (745)
.+.|++..|.+|+++.|+|.+.. +.+. +.|.- +...+... +.....|.|.+++. | |.|.|.+. ..|..
T Consensus 3 ~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~-----~~~~~~l~l~~vs~-~-g~y~C~~~-c~~~~ 73 (185)
T 1iam_A 3 SVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLP-----GNNRKVYELSNVQE-D-SQPMCYSN-CPDGQ 73 (185)
T ss_dssp EEESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSS-----SSSEEEEEEEEECS-C-BCCEEEEE-CSSCE
T ss_pred EEECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEecc-----CCceeEEEEEecCc-C-CEEEEEEE-CCCCc
Confidence 35677788999999999999964 4554 77752 11111000 12224699999984 4 99999984 44556
Q ss_pred EEEEEEEEEEecCeE-EecCceeEeeCCCeEEEEEEEee-cCCC--eEEEEeCCEeccCCCCCCceeecCceEEEccCCC
Q psy11701 114 KSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASG-LPEP--EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRK 189 (745)
Q Consensus 114 ~~~~~~l~V~~~p~~-~~~~~~~~v~~G~~~~l~C~~~~-~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~ 189 (745)
....+.|.|+.+|.- .+.+....+.+|+.++|.|.+.| .|.+ .|+|+|+++.+........ ..+.+|++.....
T Consensus 74 ~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~--~~~~tl~~~~~re 151 (185)
T 1iam_A 74 STAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGE--PAEVTTTVLVRRD 151 (185)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTT--TEEEEEEEECCSS
T ss_pred eEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCc--cccEEEEEeceec
Confidence 678899999988764 44555566899999999999988 5554 5899999998864321110 1123677766555
Q ss_pred CCCEEEEEEEEeCCc
Q psy11701 190 SDTGNYGCNATNSLG 204 (745)
Q Consensus 190 ~d~G~Y~C~~~~~~g 204 (745)
+|...|+|+|.+..+
T Consensus 152 D~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 152 HHGAQFSCRTELDLR 166 (185)
T ss_dssp CSSCEEEEEEEEECG
T ss_pred cCCCeEEEEEEecCc
Confidence 666699999998765
No 484
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.54 E-value=4.2e-14 Score=132.68 Aligned_cols=171 Identities=18% Similarity=0.268 Sum_probs=107.7
Q ss_pred CCCceEEecCceEEEEEEEeec--CCCeEEEeeCC--EE---c--------------cCceEEEeecC---cEEEcccCC
Q psy11701 224 APKDEYTVDGKTVVLTCRVFGA--PKPEVNWIHNQ--KE---L--------------TGGRYTILETG---DLKITDVAF 279 (745)
Q Consensus 224 ~~~~~~v~~g~~~~l~C~~~~~--p~~~i~W~~~~--~~---~--------------~~~~~~~~~~~---~l~i~~~~~ 279 (745)
.|....+.+|++++|.|.+.+. +...+.|++.. .. + ..+++.....+ .|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 3456678899999999999764 35679998732 11 1 12344443332 499999999
Q ss_pred CCCEEEEEEEEeCCce----EEEEEEEEEe----ecceeecCCCcEEEecCCeEEEEEEEEecCCCCcEEEEeeCCeecc
Q psy11701 280 ADSGEYTCFARNKLGT----AQGSGSLTVK----EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351 (745)
Q Consensus 280 ~d~G~Y~C~~~n~~g~----~~~~~~l~v~----~~p~~~~~p~~~~~~~g~~~~l~C~~~~~~~~~~~i~W~~~~~~~~ 351 (745)
+|+|.|.|.+.+..+. ......|.|. .+|.+...+....+..|+.++|.|.+.+.+++.+.+.|++++..+.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 9999999999987542 2334567775 3344432222223456999999999999766567899999886543
Q ss_pred CCCCCeEEEcCCeEEEE---ecCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy11701 352 FESEPRFVQSNDYSLTV---TKSSELDSGQYTCRAQTELDFIEAQATL 396 (745)
Q Consensus 352 ~~~~~~~~~~~~~~l~i---~~~~~~~~g~y~c~a~n~~g~~~~~~~l 396 (745)
....... ...++.+.+ ..+...| |.|+|.|.|..|.......+
T Consensus 165 ~~~~~~~-~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 165 VRTFPSV-RQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp EEECCCE-ECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred eEecCce-ECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 2222222 222333333 3455666 99999999998876555444
No 485
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.53 E-value=3.9e-14 Score=132.75 Aligned_cols=166 Identities=20% Similarity=0.336 Sum_probs=106.3
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc-------------CCCCCCceeec------CceEEEccCC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS-------------QAPPNPRRKVG------PNRITIENLR 188 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~-------------~~~~~~~~~~~------~~~L~i~~v~ 188 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ......++... +..|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 5566789999999999998754 4789999852 2110 00112233221 2489999999
Q ss_pred CCCCEEEEEEEEeCCce---EEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-eEEEeeCCEEcc
Q psy11701 189 KSDTGNYGCNATNSLGY---VYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-EVNWIHNQKELT 260 (745)
Q Consensus 189 ~~d~G~Y~C~~~~~~g~---~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~ 260 (745)
.+|+|.|.|.+.+..+. ....+.|.|.. .+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..+.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCS
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCc
Confidence 99999999999986421 11235666753 24555443323345689999999999987 777 999999876432
Q ss_pred Cc-eEEEeecCcE----EEcccCCCCCEEEEEEEEeCCceEEE
Q psy11701 261 GG-RYTILETGDL----KITDVAFADSGEYTCFARNKLGTAQG 298 (745)
Q Consensus 261 ~~-~~~~~~~~~l----~i~~~~~~d~G~Y~C~~~n~~g~~~~ 298 (745)
.. .......+.+ .+.....+| |.|+|.|.|..+....
T Consensus 167 ~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 167 VHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp CCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred eEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 11 0001111221 122333345 9999999998877543
No 486
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=7.2e-14 Score=115.72 Aligned_cols=100 Identities=18% Similarity=0.307 Sum_probs=79.8
Q ss_pred CCCCCC-CCCCceeEEEc--CCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCC
Q psy11701 499 TPEGVP-GTVQSLEAIPL--GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575 (745)
Q Consensus 499 t~~~~P-~~p~~~~~~~~--~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 575 (745)
|.++.| ++|.++++... +.++|.|+|++|.+.+|.|.+|.|+|+.........+.... + ....+.++|.+|.|+
T Consensus 3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~-~~~~~~~~i~~L~p~ 79 (114)
T 2ede_A 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET--I-SGDRLTHQIMDLNLD 79 (114)
T ss_dssp CCCCCCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE--E-ETTCCEEEECSCCSS
T ss_pred CCCCCCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE--E-CCCceEEEEcCCCCC
Confidence 344444 88999999988 78999999999988889999999999875543333222111 1 456789999999999
Q ss_pred ccEEEEEEEEecCCCCCCcceeeecc
Q psy11701 576 TKYRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 576 t~Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
+.|.|+|.|.|..|.|++|..+.+.+
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~~~~~T 105 (114)
T 2ede_A 80 TMYYFRIQARNSKGVGPLSDPILFRT 105 (114)
T ss_dssp CEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred CEEEEEEEEEeCCcCcCCcccEEEEe
Confidence 99999999999999999998776554
No 487
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.53 E-value=1.8e-14 Score=138.24 Aligned_cols=164 Identities=18% Similarity=0.268 Sum_probs=95.9
Q ss_pred CceeEeeCCCeEEEEEEEeecC--CCeEEEEeCC--Eecc------C--------CCCCCceee------cCceEEEccC
Q psy11701 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNG--KPIS------Q--------APPNPRRKV------GPNRITIENL 187 (745)
Q Consensus 132 ~~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~g--~~~~------~--------~~~~~~~~~------~~~~L~i~~v 187 (745)
|....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+. . .....++.. ....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456789999999999998765 5789999853 1110 0 001223322 1348999999
Q ss_pred CCCCCEEEEEEEEeCCc----------e---EEEEEEEEEee---cCCeeeeCCCceEEecCceEEEEEEEeec-CCC-e
Q psy11701 188 RKSDTGNYGCNATNSLG----------Y---VYKDVYVNVLA---HAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKP-E 249 (745)
Q Consensus 188 ~~~d~G~Y~C~~~~~~g----------~---~~~~~~l~v~~---~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-p~~-~ 249 (745)
+.+|+|.|.|.+.+..| . ......|.|.. .+|.+...+....+..|+.++|.|.+.+. |.+ .
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~ 166 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 166 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCE
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcE
Confidence 99999999999998754 1 11235677764 34655443333346789999999999986 766 8
Q ss_pred EEEeeCCEEccCc--eEEEeec------CcEEEcccCCCCCEEEEEEEEeCCceE
Q psy11701 250 VNWIHNQKELTGG--RYTILET------GDLKITDVAFADSGEYTCFARNKLGTA 296 (745)
Q Consensus 250 i~W~~~~~~~~~~--~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 296 (745)
+.|++++..+... ......+ ..|.|.++...| |.|+|.|.|.....
T Consensus 167 v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 167 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp EEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred EEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 9999988653211 0011122 246777777667 99999999975543
No 488
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.53 E-value=2.8e-14 Score=137.56 Aligned_cols=165 Identities=16% Similarity=0.284 Sum_probs=107.8
Q ss_pred EecCceeEeeCCCeEEEEEEEeecCCCeEEEEeC--CEe---ccC-CC--------CCC-ceeecC-ce--EEEccCCCC
Q psy11701 129 TVEPEFINAAEEETVTFECKASGLPEPEIHWVHN--GKP---ISQ-AP--------PNP-RRKVGP-NR--ITIENLRKS 190 (745)
Q Consensus 129 ~~~~~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--g~~---~~~-~~--------~~~-~~~~~~-~~--L~i~~v~~~ 190 (745)
...|....+.+|++++|.|.+.+.+.+.+.|+|. +.. +.. .. ... ++.... .. |.|.+++.+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~ 84 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMS 84 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCS
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChh
Confidence 3456778899999999999998888889999982 111 100 00 001 222211 11 999999999
Q ss_pred CCEEEEEEEEeCCc------eEEEEEEEEEee-----cCCeeeeC-CCceEEecCceEEEEEEEee-cCCC-eEEEeeCC
Q psy11701 191 DTGNYGCNATNSLG------YVYKDVYVNVLA-----HAPEITEA-PKDEYTVDGKTVVLTCRVFG-APKP-EVNWIHNQ 256 (745)
Q Consensus 191 d~G~Y~C~~~~~~g------~~~~~~~l~v~~-----~~p~~~~~-~~~~~v~~g~~~~l~C~~~~-~p~~-~i~W~~~~ 256 (745)
|+|.|+|.+.+..+ .......+.|.. .+|.+... +....+..|+.++|.|.+.+ .|.+ .+.|++++
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g 164 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 164 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECC
Confidence 99999999986643 111224566653 34544332 23333445789999999998 4655 89999999
Q ss_pred EEccCceEEEe---------ec------CcEEEcccCCCC-CEEEEEEEEeCC
Q psy11701 257 KELTGGRYTIL---------ET------GDLKITDVAFAD-SGEYTCFARNKL 293 (745)
Q Consensus 257 ~~~~~~~~~~~---------~~------~~l~i~~~~~~d-~G~Y~C~~~n~~ 293 (745)
..+........ .+ ..|.|.....+| .|.|+|.|.|..
T Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 165 KEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 88754322110 12 247777776667 779999999864
No 489
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.53 E-value=3.6e-14 Score=112.45 Aligned_cols=88 Identities=19% Similarity=0.295 Sum_probs=73.7
Q ss_pred CeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECC--EecCCCCCeEeccCCcEEEEccCCCCCCEEEEEEEEeCCe
Q psy11701 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111 (745)
Q Consensus 34 ~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~i~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 111 (745)
+.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++ ..+....++........|.|.+++.+|+|.|+|.|.|..|
T Consensus 3 P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G 82 (93)
T 1wit_A 3 PKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELG 82 (93)
T ss_dssp CEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTE
T ss_pred CeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCCC
Confidence 33456678899999999999999999999999999999 8887654455444556899999999999999999999999
Q ss_pred eeEEEEEEEEE
Q psy11701 112 EAKSYSIDLSV 122 (745)
Q Consensus 112 ~~~~~~~~l~V 122 (745)
... ..+.|.|
T Consensus 83 ~~~-~~~~l~V 92 (93)
T 1wit_A 83 EDE-AIFEVIV 92 (93)
T ss_dssp EEE-EEEEEEE
T ss_pred eEE-EEEEEEE
Confidence 765 6677766
No 490
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.53 E-value=6.2e-14 Score=132.33 Aligned_cols=170 Identities=15% Similarity=0.163 Sum_probs=109.6
Q ss_pred EeeccceeEecCCcEEEEEEEeec--CCCeeEEEECC--Ee---c--------------CCCCCeEecc----CCcEEEE
Q psy11701 37 YVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKDG--VP---I--------------NPSDRISQGN----YGKSLII 91 (745)
Q Consensus 37 ~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~--~~---i--------------~~~~~~~~~~----~~~~L~i 91 (745)
+..|..+.+.+|++|+|.|.+.+. +...+.|+|.. .. + .-.+|+.+.. ...+|+|
T Consensus 4 v~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (226)
T 3mlr_H 4 LVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQW 83 (226)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEE
T ss_pred EEcCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEE
Confidence 445567889999999999999763 34589999832 11 1 0124554422 2236999
Q ss_pred ccCCCCCCEEEEEEEEeCCe-------e-eEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEee-cC-CCeE
Q psy11701 92 KHVEFSDQGSYTCEVSNGVG-------E-AKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASG-LP-EPEI 157 (745)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~g-------~-~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p-~~~v 157 (745)
.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+...+....+.+|+.+.|.|.+.+ .| .+.+
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v 163 (226)
T 3mlr_H 84 TTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 163 (226)
T ss_dssp SSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEE
T ss_pred CCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEE
Confidence 99999999999999976421 0 11122355663 3555554444445678999999999987 44 4589
Q ss_pred EEEeCCEeccCCCC-CCcee------ecCceEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy11701 158 HWVHNGKPISQAPP-NPRRK------VGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209 (745)
Q Consensus 158 ~W~~~g~~~~~~~~-~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~ 209 (745)
.| ++..+..... ..... ...+.|.|.+...+| |.|+|.|.|..+.....
T Consensus 164 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 164 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp EE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred EE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 99 4433321100 00111 112478999999889 99999999987764443
No 491
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.53 E-value=1.1e-13 Score=113.16 Aligned_cols=94 Identities=28% Similarity=0.494 Sum_probs=80.3
Q ss_pred CCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCCc--EEEEccCCCCCCEEEEEEEEeC
Q psy11701 32 APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK--SLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 32 ~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
.|+.+...+.+..+.+|++++|.|.+.|.|.+.+.|+|++..+....++.+...+. +|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 91 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcC
Confidence 35566778889999999999999999999999999999999998877777654443 8999999999999999999999
Q ss_pred CeeeEEEEEEEEEEecC
Q psy11701 110 VGEAKSYSIDLSVLAAP 126 (745)
Q Consensus 110 ~g~~~~~~~~l~V~~~p 126 (745)
.|... ..+.|.|..+|
T Consensus 92 ~g~~~-~~~~l~V~~~P 107 (107)
T 3irg_B 92 AGEAY-AAAAVTVLEPP 107 (107)
T ss_dssp TEEEE-EEEEEEEEC--
T ss_pred CCcEE-EEEEEEEEcCC
Confidence 88866 77888888765
No 492
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=5.1e-14 Score=115.08 Aligned_cols=93 Identities=22% Similarity=0.375 Sum_probs=77.1
Q ss_pred eCCCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCcc
Q psy11701 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 498 ~t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
.|.+++|++|. +.+...+.++|.|+|++|.+.+|.|.+|.|+|+..+...+.... + ....+++.|.+|.|++.
T Consensus 2 ~T~~~~P~~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~-~~~~~~~~i~~L~p~t~ 74 (107)
T 2dn7_A 2 SSGSSGPGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----F-GKDDQHFTVTGLHKGTT 74 (107)
T ss_dssp TTCCCCCCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----E-ETTCCEEEEECCCTTCE
T ss_pred CCCCCCCCCCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----e-CCCccEEEeCCCCCCCE
Confidence 36678898887 77778899999999999988889999999999987654332211 2 45668999999999999
Q ss_pred EEEEEEEEecCCCCCCccee
Q psy11701 578 YRIHLAGYTKAGDGAESKYL 597 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~ 597 (745)
|.|+|.|+|..|.|++|...
T Consensus 75 Y~~~V~A~n~~G~g~~s~~~ 94 (107)
T 2dn7_A 75 YIFRLAAKNRAGLGEEFEKE 94 (107)
T ss_dssp EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEcCCcccCCeeeE
Confidence 99999999999999998743
No 493
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.52 E-value=1.4e-13 Score=132.87 Aligned_cols=176 Identities=15% Similarity=0.221 Sum_probs=110.9
Q ss_pred eEeeccceeEecCCcEEEEEEEeec--CCCeeEEEEC--CEe---c--------------CCCCCeEecc----CCcEEE
Q psy11701 36 QYVTRKKEVALRNKKVELFCIFGGT--PLPQTIWSKD--GVP---I--------------NPSDRISQGN----YGKSLI 90 (745)
Q Consensus 36 ~~~~~~~~~v~~G~~~~l~C~~~g~--p~~~v~W~~~--~~~---i--------------~~~~~~~~~~----~~~~L~ 90 (745)
.+..+....+.+|++|+|.|.+.+. ....+.|+|. +.. + .-.+|+.+.. ...+|+
T Consensus 26 ~v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 105 (256)
T 3sob_H 26 QLVESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQ 105 (256)
T ss_dssp EEEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEEecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEE
Confidence 3445566789999999999999753 2458999973 211 1 0124555422 223699
Q ss_pred EccCCCCCCEEEEEEEEeCC----------eeeEEEEEEEEEE----ecCeEEecCceeEeeCCCeEEEEEEEee-cC-C
Q psy11701 91 IKHVEFSDQGSYTCEVSNGV----------GEAKSYSIDLSVL----AAPYFTVEPEFINAAEEETVTFECKASG-LP-E 154 (745)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~----------g~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~p-~ 154 (745)
|.+++.+|+|.|.|.+.+.. .........|.|. .+|.+...+....+.+|+.++|.|.+.+ .| .
T Consensus 106 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~ 185 (256)
T 3sob_H 106 MNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 185 (256)
T ss_dssp ECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSC
T ss_pred ECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCC
Confidence 99999999999999998642 1112233456664 3555554444445678999999999987 45 3
Q ss_pred CeEEEEeCCEeccCCCCC-Cce------eecCceEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEE
Q psy11701 155 PEIHWVHNGKPISQAPPN-PRR------KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214 (745)
Q Consensus 155 ~~v~W~~~g~~~~~~~~~-~~~------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~g~~~~~~~l~v 214 (745)
..+.| ++..+...... ... ....+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 186 ~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 186 VTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp CEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred eEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 58999 55444321100 011 1112478899999999 9999999998876655555444
No 494
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=4.9e-14 Score=113.58 Aligned_cols=94 Identities=27% Similarity=0.429 Sum_probs=78.6
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCC-CCCeEeccCCcEEEEccCCCCCCEEEEEEEEeC
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (745)
..|+.+...+.+..+.+|++++|.|.+.|.|.+.+.|+|++..+.. ..++.... +++|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~n~ 84 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE-QGTLQIKNLRISDTGTYTCVATSS 84 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECT-TCCEEEESCCTTTCCEEEEEEECS
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcC-CCEEEEccCCcccCEEEEEEEEcC
Confidence 4566677889999999999999999999999999999999998873 34555433 447999999999999999999999
Q ss_pred CeeeEEEEEEEEEEecC
Q psy11701 110 VGEAKSYSIDLSVLAAP 126 (745)
Q Consensus 110 ~g~~~~~~~~l~V~~~p 126 (745)
.|... ..+.|.|..+|
T Consensus 85 ~g~~~-~~~~l~V~~~~ 100 (100)
T 2edj_A 85 SGETS-WSAVLDVTESG 100 (100)
T ss_dssp SCCCB-CCEEEEEESCC
T ss_pred CCCEE-EEEEEEEecCC
Confidence 88765 66888887654
No 495
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=6.2e-14 Score=114.22 Aligned_cols=94 Identities=26% Similarity=0.478 Sum_probs=79.1
Q ss_pred CCCCCCCCCceeEEEcCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEE
Q psy11701 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579 (745)
Q Consensus 500 ~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 579 (745)
.+++|++|.++++...+.++|.|+|++|...+|.|.+|+|+|+..+...+... ....+++.|.+|.|++.|.
T Consensus 4 ~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--------~~~~~~~~i~~L~p~t~Y~ 75 (106)
T 2ed8_A 4 GSSGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNI--------EVDGLSYKLEGLKKFTEYS 75 (106)
T ss_dssp CCCCCCCCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEE--------EECSSCEEEESCCTTCEEE
T ss_pred CCCCCcCCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEE--------eCCccEEEECCCCCCCEEE
Confidence 45789999999999999999999999998888899999999998765433211 2235899999999999999
Q ss_pred EEEEEEecCCCCCCcceeeecc
Q psy11701 580 IHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 580 ~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
|+|.|+|..|.|++|..+.+.+
T Consensus 76 ~~V~A~n~~G~g~~S~~~~~~T 97 (106)
T 2ed8_A 76 LRFLAYNRYGPGVSTDDITVVT 97 (106)
T ss_dssp EEEEEECSSCEEEECCCEEEEC
T ss_pred EEEEEEeCCccCCCcCCEEEEc
Confidence 9999999999999988765553
No 496
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.52 E-value=9.4e-13 Score=136.96 Aligned_cols=221 Identities=13% Similarity=0.134 Sum_probs=135.6
Q ss_pred CCCCceeEEeecCceeEEEEEeCCCCCcceeeeeEEEEEEeccCCCCceeEEEEc-----------cCceeEEEe--ccc
Q psy11701 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN-----------KGESTTTEV--DKF 470 (745)
Q Consensus 404 ~P~~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~y~i~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i--~~L 470 (745)
+|.++.+.. .....+++.|+++... .....|.+.|+..... ......... ......+.+ ..+
T Consensus 5 ~~~~l~C~~-~~~~~~~C~W~~~~~~---~~~~~~~l~y~~~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 79 (419)
T 2gys_A 5 PLQTLRCYN-DYTSHITCRWADTQDA---QRLVNVTLIRRVNEDL-LEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSF 79 (419)
T ss_dssp HHHHCEEEE-CSSSEEEEEEEEEHHH---HTTCCEEEEEEEETTE-EEECCEEECSCCTTSCCCSSSEEEEEEEEECSCC
T ss_pred cCCCceEEe-CCCEEEEEEeeCCcCC---CCcccEEEEeecCCcC-CccceeccccCcccccCCCCCccccEeEeCCcce
Confidence 467788877 7778999999985421 1123588877653210 000000000 001124444 444
Q ss_pred ccCcceeEEEEEecCCCCCCCCcceEEe-CCCCCCCCCCceeEEEcCCceEEEEeeCCCCCC------CceeeEEEEEEE
Q psy11701 471 VPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN------GVLMGYKIKYQS 543 (745)
Q Consensus 471 ~~~~~Y~~~V~a~n~~G~g~~S~~~~~~-t~~~~P~~p~~~~~~~~~~~~i~l~W~~p~~~~------g~i~~Y~v~~~~ 543 (745)
.-...|.|+|.|.|..|. ...+. .....|.||.+|.+.... +.+.|+|++|.... +....|.|+|+.
T Consensus 80 ~~~~~~~~~v~~~~~~~~-----~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~ 153 (419)
T 2gys_A 80 VVTDVDYFSFQPDRPLGT-----RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKR 153 (419)
T ss_dssp CTTCEEEEEEEESSCCCE-----EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEE
T ss_pred eeecccEEEEeCCccccc-----cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEcc
Confidence 556689999999776653 12232 233578889999988866 69999999987521 357899999998
Q ss_pred cCCcccCCcccccccccCCCcceeeec--CCCCCccEEEEEEEEecC---CCCCCcceeeecccCCCCCCCC-------C
Q psy11701 544 VKGTKVGPLLERLPYISDPTTTSAKLA--GLEPSTKYRIHLAGYTKA---GDGAESKYLFYVPFKNPDNVEG-------R 611 (745)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~l~--~L~p~t~Y~~~V~a~n~~---G~g~~S~~~~~~~~~~~~~~~~-------~ 611 (745)
.+ ..|..... + ......+.+. +|.|++.|+|+|+|.+.. +.|.+|+++..+...++...+. .
T Consensus 154 ~~-~~w~~~~~----~-~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~ 227 (419)
T 2gys_A 154 LQ-DSWEDAAI----L-LSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECF 227 (419)
T ss_dssp TT-SCSTTCEE----E-EESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEE
T ss_pred CC-CChhheee----e-cccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEE
Confidence 76 44433321 1 1123455555 999999999999999964 4578777665444334332221 1
Q ss_pred CCCCcceeEEEeecCccccCCCcceEEEEEecc
Q psy11701 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644 (745)
Q Consensus 612 ~~~p~~~~v~W~~~~~~~~~g~i~~y~i~~~~~ 644 (745)
......|.+.|++....... ..|+|+|+..
T Consensus 228 ~~~~~~l~c~W~~~~~~~~~---~~y~l~y~~~ 257 (419)
T 2gys_A 228 FDGAAVLSCSWEVRKEVASS---VSFGLFYKPS 257 (419)
T ss_dssp ECSSSEEEEEEEEEHHHHTT---CCEEEEEECC
T ss_pred ECCceEEEeEEECCCCCCCc---eeEEEEEEec
Confidence 23346788999976322222 6799999865
No 497
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=2.9e-14 Score=114.05 Aligned_cols=92 Identities=20% Similarity=0.335 Sum_probs=78.3
Q ss_pred CCCCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccCC--cEEEEccCCCCCCEEEEEEEEe
Q psy11701 31 HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG--KSLIIKHVEFSDQGSYTCEVSN 108 (745)
Q Consensus 31 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~ 108 (745)
.+|..|...+.+..+.+|++++|.|.+ .|.+.+.|+|||.+|....++.+...+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 346667788999999999999999999 788899999999999988887765544 4899999999999999999988
Q ss_pred CCeeeEEEEEEEEEEecCe
Q psy11701 109 GVGEAKSYSIDLSVLAAPY 127 (745)
Q Consensus 109 ~~g~~~~~~~~l~V~~~p~ 127 (745)
. ..+.++.|.|..+|.
T Consensus 83 ~---~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y---NVTLPAKVHVISGPS 98 (100)
T ss_dssp S---CCCEEEEEEEECCSC
T ss_pred C---CeeEEEEEEEeCCCC
Confidence 6 233668899988774
No 498
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.51 E-value=7.1e-14 Score=112.11 Aligned_cols=93 Identities=15% Similarity=0.287 Sum_probs=72.4
Q ss_pred CCCCceeEEEcCCceEEEEeeCCCC--CCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCccEEEEE
Q psy11701 505 GTVQSLEAIPLGSSAFYLKWVKPEQ--PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582 (745)
Q Consensus 505 ~~p~~~~~~~~~~~~i~l~W~~p~~--~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V 582 (745)
.+|.++.+...+.++|.|+|++|.. .+|.|.||.|.|+..+......+.... + .+...++.|.+|+|++.|.|+|
T Consensus 6 ~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~--v-~~~~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 6 TGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDV--V-EGSKQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp SCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEE--E-ETTCSEEEECSCCTTCEEEEEE
T ss_pred CCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEE--E-cCCceEEECCCCCCCCEEEEEE
Confidence 5788999999999999999999874 789999999999987643212221111 2 3456789999999999999999
Q ss_pred EEEecCCCCCCcceeeec
Q psy11701 583 AGYTKAGDGAESKYLFYV 600 (745)
Q Consensus 583 ~a~n~~G~g~~S~~~~~~ 600 (745)
.|+|.+|.|++|..+...
T Consensus 83 ~A~n~~G~G~~S~~~~~~ 100 (102)
T 3n1f_C 83 QCFNEGGESEFSNVMICE 100 (102)
T ss_dssp EEEETTEECCCCCCEEEE
T ss_pred EEECCCcCCCCCCCEEee
Confidence 999999999999876543
No 499
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.51 E-value=2.1e-13 Score=110.58 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=79.2
Q ss_pred CCeeEeeccceeEecCCcEEEEEEEeecCCCeeEEEECCEecCCCCCeEeccC--CcEEEEccCCCCCCEEEEEEEEeCC
Q psy11701 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEVSNGV 110 (745)
Q Consensus 33 p~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~i~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (745)
|+.+...+.+..+.+|+++.|.|.+.|.|.|.+.|+|++..+....++.+... ..+|.|.+++.+|+|.|+|.|.|..
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 87 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYK 87 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCC
Confidence 45566788899999999999999999999999999999999988777665443 3479999999999999999999999
Q ss_pred eeeEEEEEEEEEEec
Q psy11701 111 GEAKSYSIDLSVLAA 125 (745)
Q Consensus 111 g~~~~~~~~l~V~~~ 125 (745)
|... ..+.|.|...
T Consensus 88 G~~~-~~~~l~V~~~ 101 (103)
T 3qp3_A 88 GEAS-DYATLDVTGG 101 (103)
T ss_dssp EEEE-EEEEEEEECC
T ss_pred CcEE-EEEEEEEECC
Confidence 8876 6688888654
No 500
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.51 E-value=1e-13 Score=113.32 Aligned_cols=94 Identities=16% Similarity=0.225 Sum_probs=77.7
Q ss_pred CCCCCCCCCceeEEE--cCCceEEEEeeCCCCCCCceeeEEEEEEEcCCcccCCcccccccccCCCcceeeecCCCCCcc
Q psy11701 500 PEGVPGTVQSLEAIP--LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577 (745)
Q Consensus 500 ~~~~P~~p~~~~~~~--~~~~~i~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 577 (745)
.++.|++|.++++.. .+.++|.|+|++|.+.+|.|.+|.|+|+..+...|... ....+.++|.+|+|++.
T Consensus 4 ~~~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--------~~~~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 4 GSSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ--------RAASNFTEIKNLLVNTL 75 (108)
T ss_dssp CCCCTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE--------EESSSEEEECSCCSSCE
T ss_pred CCCCCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe--------cCCccEEEeCCCCCCCE
Confidence 346788999998766 58899999999999888999999999998765433211 22457999999999999
Q ss_pred EEEEEEEEecCCCCCCcceeeecc
Q psy11701 578 YRIHLAGYTKAGDGAESKYLFYVP 601 (745)
Q Consensus 578 Y~~~V~a~n~~G~g~~S~~~~~~~ 601 (745)
|.|+|.|+|..|.|++|..+...+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T 99 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITT 99 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEEC
T ss_pred EEEEEEEECCCceeCCCCCEEEEC
Confidence 999999999999999998776553
Done!