Your job contains 1 sequence.
>psy11709
MTAVVQPPPVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQD
ANEADIESVLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLE
PTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKLLRLLHQALLA
SKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFL
LHPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMR
LLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTAENASQAR
EDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVSEKVNTYQDFYKQHKE
YIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11709
(474 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033902 - symbol:Tango7 "Transport and Golgi organ... 817 2.0e-81 1
UNIPROTKB|Q292F0 - symbol:Tango7 "Eukaryotic translation ... 815 3.2e-81 1
UNIPROTKB|F1NZE2 - symbol:EIF3M "Eukaryotic translation i... 692 3.5e-68 1
UNIPROTKB|Q5ZJ64 - symbol:EIF3M "Eukaryotic translation i... 691 4.4e-68 1
UNIPROTKB|E2QWG8 - symbol:EIF3M "Uncharacterized protein"... 690 5.6e-68 1
UNIPROTKB|Q7L2H7 - symbol:EIF3M "Eukaryotic translation i... 690 5.6e-68 1
UNIPROTKB|F1SGR0 - symbol:EIF3M "Uncharacterized protein"... 690 5.6e-68 1
MGI|MGI:1351744 - symbol:Eif3m "eukaryotic translation in... 689 7.2e-68 1
UNIPROTKB|F1N5F7 - symbol:EIF3M "Eukaryotic translation i... 689 7.2e-68 1
UNIPROTKB|Q3T148 - symbol:EIF3M "Eukaryotic translation i... 682 4.0e-67 1
ZFIN|ZDB-GENE-050913-52 - symbol:zgc:114126 "zgc:114126" ... 446 1.8e-66 2
ZFIN|ZDB-GENE-040426-2643 - symbol:eif3m "eukaryotic tran... 672 4.5e-66 1
RGD|1565840 - symbol:Eif3m "eukaryotic translation initia... 322 5.6e-29 1
WB|WBGene00019543 - symbol:cif-1 species:6239 "Caenorhabd... 286 1.7e-24 1
UNIPROTKB|Q94261 - symbol:cif-1 "COP9/Signalosome and eIF... 286 1.7e-24 1
DICTYBASE|DDB_G0287005 - symbol:DDB_G0287005 "proteasome ... 246 1.6e-18 1
UNIPROTKB|A4RK68 - symbol:MGG_01595 "Eukaryotic translati... 206 9.2e-14 1
TAIR|locus:2076517 - symbol:AT3G02200 "AT3G02200" species... 159 1.6e-08 1
TAIR|locus:2180917 - symbol:AT5G15610 "AT5G15610" species... 150 1.7e-07 1
ASPGD|ASPL0000017804 - symbol:AN4259 species:162425 "Emer... 147 4.0e-07 1
POMBASE|SPAC1751.03 - symbol:SPAC1751.03 "translation ini... 116 1.2e-06 3
>FB|FBgn0033902 [details] [associations]
symbol:Tango7 "Transport and Golgi organization 7"
species:7227 "Drosophila melanogaster" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 EMBL:AE013599 GO:GO:0005829
GO:GO:0005794 GO:GO:0005875 GO:GO:0003824 GO:GO:0009306
GO:GO:0003743 GO:GO:0007030 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY118924 RefSeq:NP_610932.1 UniGene:Dm.3068
ProteinModelPortal:Q7JVI3 SMR:Q7JVI3 IntAct:Q7JVI3 STRING:Q7JVI3
PaxDb:Q7JVI3 PRIDE:Q7JVI3 EnsemblMetazoa:FBtr0087579 GeneID:36565
KEGG:dme:Dmel_CG8309 CTD:36565 FlyBase:FBgn0033902
InParanoid:Q7JVI3 OrthoDB:EOG4TTF0C PhylomeDB:Q7JVI3
GenomeRNAi:36565 NextBio:799232 Bgee:Q7JVI3 Uniprot:Q7JVI3
Length = 387
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 161/276 (58%), Positives = 203/276 (73%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
PVFIDL L++Q ELR Y K LGAEIS EKS KG+EDDLHKIIGVCD CF+D + I+
Sbjct: 5 PVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDG 64
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
+LNSIVS+++ I +R EN++LA+ EK++KA + LG V L+ LW LF +L+ SP+RYH
Sbjct: 65 ILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYH 124
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VYYHLVQ+A+ +Q+ VF VD LK QF+ CPPS+EQMQK YRLL
Sbjct: 125 VYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKL-------------YRLLH 171
Query: 189 MQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLK 248
TK + EL++KVMIELL TYTA+NA AREDA CI+ ALADPNTFLL PLL+LK
Sbjct: 172 DVTKDT---NLELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLK 228
Query: 249 PVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYI 284
PV+FLEG+LIHDLL+IFV+EK+ Y FY+ H+E++
Sbjct: 229 PVRFLEGDLIHDLLSIFVSEKLPAYVQFYEDHREFV 264
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 94/155 (60%), Positives = 123/155 (79%)
Query: 182 KQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLL 241
K YRLL TK + EL++KVMIELL TYTA+NA AREDA CI+ ALADPNTFLL
Sbjct: 165 KLYRLLHDVTKDT---NLELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLL 221
Query: 242 HPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRL 301
PLL+LKPV+FLEG+LIHDLL+IFV+EK+ Y FY+ H+E+ VN GL+H++N++KMRL
Sbjct: 222 DPLLSLKPVRFLEGDLIHDLLSIFVSEKLPAYVQFYEDHREF-VNSQGLNHEQNMKKMRL 280
Query: 302 LTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID 336
LTFMQLAE+ EM+F+ + KEL +N +++E F+I+
Sbjct: 281 LTFMQLAESSPEMTFETLTKELQINEDEVEPFVIE 315
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 86/137 (62%), Positives = 115/137 (83%)
Query: 338 KIAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIH 397
++++KVMIELL TYTA+NA AREDA CI+ ALADPNTFLL PLL+LKPV+FLEG+LIH
Sbjct: 180 ELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIH 239
Query: 398 DLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMI 457
DLL+IFVSEK+ Y FY+ H+E+ VN GL+H++N++KMRLLTFMQLAE+ EM+F+ +
Sbjct: 240 DLLSIFVSEKLPAYVQFYEDHREF-VNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETL 298
Query: 458 QKELDLNPNQIEAFIID 474
KEL +N +++E F+I+
Sbjct: 299 TKELQINEDEVEPFVIE 315
>UNIPROTKB|Q292F0 [details] [associations]
symbol:Tango7 "Eukaryotic translation initiation factor 3
subunit M" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 GO:GO:0005794 GO:GO:0003824
GO:GO:0009306 GO:GO:0003743 EMBL:CM000071 GenomeReviews:CM000071_GR
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 OMA:PNTFLLD
OrthoDB:EOG4TTF0C RefSeq:XP_001360337.1 GeneID:4803654
KEGG:dpo:Dpse_GA20974 FlyBase:FBgn0080963 InParanoid:Q292F0
Uniprot:Q292F0
Length = 387
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 161/276 (58%), Positives = 203/276 (73%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
PVFIDL L++Q ELR Y K LGAEIS EKS KG+EDDLHKIIGVCD CF+D + I+
Sbjct: 5 PVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDG 64
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
+LNSIVS+++ I +R EN++LA+ EK++KA + LG V L+ LW LF +L+ SP+RYH
Sbjct: 65 ILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNQPLGKVCLQSLWRLFNNLDTASPLRYH 124
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VYYHLVQ+A+ +Q+ VF VD LK QF+ CPPS+EQMQK YRLL
Sbjct: 125 VYYHLVQVAKQCEQVLEVFTGVDQLKTQFANCPPSSEQMQKL-------------YRLLH 171
Query: 189 MQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLK 248
TK + EL++KVMIELL TYTA+NA AREDA CI+ ALADPNTFLL PLL LK
Sbjct: 172 DVTKDT---NMELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLALK 228
Query: 249 PVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYI 284
PV+FLEG+LIHDLL+IFV++K+ +Y FY+ HKE++
Sbjct: 229 PVRFLEGDLIHDLLSIFVSDKLPSYVQFYEDHKEFV 264
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 94/154 (61%), Positives = 121/154 (78%)
Query: 182 KQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLL 241
K YRLL TK + EL++KVMIELL TYTA+NA AREDA CI+ ALADPNTFLL
Sbjct: 165 KLYRLLHDVTKDT---NMELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLL 221
Query: 242 HPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRL 301
PLL LKPV+FLEG+LIHDLL+IFV++K+ +Y FY+ HKE+ VN GL+H++N++KMRL
Sbjct: 222 DPLLALKPVRFLEGDLIHDLLSIFVSDKLPSYVQFYEDHKEF-VNSQGLNHEQNMKKMRL 280
Query: 302 LTFMQLAETKTEMSFDMIQKELDLNPNQIEAFII 335
LTFMQLAE+ EM+FD + KEL + +++E F+I
Sbjct: 281 LTFMQLAESNPEMTFDTLTKELQITEDEVEPFVI 314
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 86/136 (63%), Positives = 113/136 (83%)
Query: 338 KIAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIH 397
++++KVMIELL TYTA+NA AREDA CI+ ALADPNTFLL PLL LKPV+FLEG+LIH
Sbjct: 180 ELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLALKPVRFLEGDLIH 239
Query: 398 DLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMI 457
DLL+IFVS+K+ +Y FY+ HKE+ VN GL+H++N++KMRLLTFMQLAE+ EM+FD +
Sbjct: 240 DLLSIFVSDKLPSYVQFYEDHKEF-VNSQGLNHEQNMKKMRLLTFMQLAESNPEMTFDTL 298
Query: 458 QKELDLNPNQIEAFII 473
KEL + +++E F+I
Sbjct: 299 TKELQITEDEVEPFVI 314
>UNIPROTKB|F1NZE2 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9031 "Gallus gallus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005852 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AADN02040176 IPI:IPI00822513 Ensembl:ENSGALT00000040077
ArrayExpress:F1NZE2 Uniprot:F1NZE2
Length = 375
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 150/333 (45%), Positives = 219/333 (65%)
Query: 5 VQPPPVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEA 64
V P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II VCD C ++ ++
Sbjct: 1 VMSVPAFIDITEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEVCDVCLKE-DDK 59
Query: 65 DIESVLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSP 124
D+ESV+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P
Sbjct: 60 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 119
Query: 125 MRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQY 184
+RY VY L+++A + I+ + ++D +++ S S + K++
Sbjct: 120 VRYTVYCSLLKVASSCGAIQYIPTELDQVRKWISDWNLSTD----------------KKH 163
Query: 185 RLLRMQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHP 243
LLR+ + C K++ AAKVM+ELL +YT +NASQAR DA CI+ AL DPNTFL
Sbjct: 164 TLLRLLYDVLVDCKKSDTAAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDH 223
Query: 244 LLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLT 303
LL LKPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLT
Sbjct: 224 LLALKPVKFLEGELIHDLLTIFVSAKLVSYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLT 282
Query: 304 FMQLAETKTEMSFDMIQKELDLNPNQIEAFIID 336
FM +A E+SFD +Q+EL + + +EAF+ID
Sbjct: 283 FMGMAVENKEISFDTMQQELQIGADDVEAFVID 315
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 82/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
AAKVM+ELL +YT +NASQAR DA CI+ AL DPNTFL LL LKPVKFLEGELIHDL
Sbjct: 182 AAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLALKPVKFLEGELIHDL 241
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 242 LTIFVSAKLVSYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 300
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 301 ELQIGADDVEAFVID 315
>UNIPROTKB|Q5ZJ64 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9031 "Gallus gallus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 GeneTree:ENSGT00390000004456
OMA:PNTFLLD EMBL:AJ720570 IPI:IPI00587349 RefSeq:NP_001006406.1
UniGene:Gga.2429 STRING:Q5ZJ64 PRIDE:Q5ZJ64
Ensembl:ENSGALT00000019782 GeneID:421602 KEGG:gga:421602
InParanoid:Q5ZJ64 NextBio:20824344 ArrayExpress:Q5ZJ64
Uniprot:Q5ZJ64
Length = 374
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 149/329 (45%), Positives = 218/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II VCD C ++ ++ D+ES
Sbjct: 4 PAFIDITEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEVCDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S S + K++ LLR
Sbjct: 123 VYCSLLKVASSCGAIQYIPTELDQVRKWISDWNLSTD----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ + C K++ AAKVM+ELL +YT +NASQAR DA CI+ AL DPNTFL LL L
Sbjct: 167 LLYDVLVDCKKSDTAAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLAL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKLVSYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 286 AVENKEISFDTMQQELQIGADDVEAFVID 314
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 82/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
AAKVM+ELL +YT +NASQAR DA CI+ AL DPNTFL LL LKPVKFLEGELIHDL
Sbjct: 181 AAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLALKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKLVSYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 300 ELQIGADDVEAFVID 314
>UNIPROTKB|E2QWG8 [details] [associations]
symbol:EIF3M "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005852 "eukaryotic translation initiation
factor 3 complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005852
CTD:10480 KO:K15030 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AAEX03011403 RefSeq:XP_533160.1 ProteinModelPortal:E2QWG8
SMR:E2QWG8 PRIDE:E2QWG8 Ensembl:ENSCAFT00000011822 GeneID:475950
KEGG:cfa:475950 NextBio:20851694 Uniprot:E2QWG8
Length = 374
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 147/329 (44%), Positives = 219/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II CD C ++ ++ D+ES
Sbjct: 4 PAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S + E K++ LLR
Sbjct: 123 VYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTL
Sbjct: 167 LLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 286 AVENKEISFDTMQQELQIGADDVEAFVID 314
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 81/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 181 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 300 ELQIGADDVEAFVID 314
>UNIPROTKB|Q7L2H7 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9606 "Homo sapiens" [GO:0003743 "translation
initiation factor activity" evidence=IC] [GO:0006413 "translational
initiation" evidence=IC] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:CH471064 GO:GO:0006413 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 OMA:PNTFLLD EMBL:AY769947
EMBL:AF064603 EMBL:CR450300 EMBL:AK222564 EMBL:AK292139
EMBL:AK312512 EMBL:BC019103 EMBL:BC051292 EMBL:DQ185042
EMBL:AF277183 IPI:IPI00102069 RefSeq:NP_006351.2 UniGene:Hs.502244
ProteinModelPortal:Q7L2H7 SMR:Q7L2H7 DIP:DIP-31256N IntAct:Q7L2H7
MINT:MINT-4915331 STRING:Q7L2H7 PhosphoSite:Q7L2H7 DMDM:74754296
PaxDb:Q7L2H7 PeptideAtlas:Q7L2H7 PRIDE:Q7L2H7 DNASU:10480
Ensembl:ENST00000531120 GeneID:10480 KEGG:hsa:10480 UCSC:uc001mtu.3
GeneCards:GC11P032564 HGNC:HGNC:24460 HPA:HPA031063 MIM:609641
neXtProt:NX_Q7L2H7 PharmGKB:PA162384944 InParanoid:Q7L2H7
PhylomeDB:Q7L2H7 ChiTaRS:EIF3M GenomeRNAi:10480 NextBio:39758
ArrayExpress:Q7L2H7 Bgee:Q7L2H7 CleanEx:HS_EIF3M
Genevestigator:Q7L2H7 Uniprot:Q7L2H7
Length = 374
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 147/329 (44%), Positives = 219/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II CD C ++ ++ D+ES
Sbjct: 4 PAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S + E K++ LLR
Sbjct: 123 VYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTL
Sbjct: 167 LLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 286 AVENKEISFDTMQQELQIGADDVEAFVID 314
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 81/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 181 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 300 ELQIGADDVEAFVID 314
>UNIPROTKB|F1SGR0 [details] [associations]
symbol:EIF3M "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005852
CTD:10480 KO:K15030 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:CU856194 RefSeq:XP_003122934.1 UniGene:Ssc.3401
Ensembl:ENSSSCT00000014541 GeneID:100513781 KEGG:ssc:100513781
Uniprot:F1SGR0
Length = 374
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 147/329 (44%), Positives = 219/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II CD C ++ ++ D+ES
Sbjct: 4 PAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S + E K++ LLR
Sbjct: 123 VYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLNTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTL
Sbjct: 167 LLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 286 AVENKEISFDTMQQELQIGADDVEAFVID 314
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 81/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 181 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 300 ELQIGADDVEAFVID 314
>MGI|MGI:1351744 [details] [associations]
symbol:Eif3m "eukaryotic translation initiation factor 3,
subunit M" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 MGI:MGI:1351744 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AL606494 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 GeneTree:ENSGT00390000004456
OMA:PNTFLLD EMBL:AK077480 EMBL:AK084738 EMBL:AK146222 EMBL:AK168066
EMBL:BC005598 EMBL:BC089568 EMBL:BC103795 EMBL:BC116787
EMBL:BC116789 IPI:IPI00115580 RefSeq:NP_663355.1 UniGene:Mm.379278
ProteinModelPortal:Q99JX4 SMR:Q99JX4 DIP:DIP-59784N STRING:Q99JX4
PhosphoSite:Q99JX4 PaxDb:Q99JX4 PRIDE:Q99JX4 DNASU:98221
Ensembl:ENSMUST00000028592 GeneID:98221 KEGG:mmu:98221
UCSC:uc008lkl.1 InParanoid:Q99JX4 NextBio:353368 Bgee:Q99JX4
Genevestigator:Q99JX4 Uniprot:Q99JX4
Length = 374
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 146/329 (44%), Positives = 219/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAE+S+E S G+ DL +II CD C ++ ++ D+ES
Sbjct: 4 PAFIDISEEDQAAELRAYLKSKGAELSEENSEGGLHVDLAQIIEACDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S + E K++ LLR
Sbjct: 123 VYCSLIKVAASCGAIQYIPTELDQVRKWISDWKLTTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTL
Sbjct: 167 LLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 286 AVENKEISFDTMQQELQIGADDVEAFVID 314
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 81/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 181 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 300 ELQIGADDVEAFVID 314
>UNIPROTKB|F1N5F7 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005852 IPI:IPI00717799 UniGene:Bt.5114
GeneTree:ENSGT00390000004456 OMA:PNTFLLD EMBL:DAAA02041245
Ensembl:ENSBTAT00000007021 Uniprot:F1N5F7
Length = 374
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 147/329 (44%), Positives = 219/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II CD C ++ ++ D+ES
Sbjct: 4 PAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S + E K++ LLR
Sbjct: 123 VYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTL
Sbjct: 167 LLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 286 AVENKEISFDTMQQELHIGADDVEAFVID 314
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 81/135 (60%), Positives = 104/135 (77%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 181 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKLASYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 300 ELHIGADDVEAFVID 314
>UNIPROTKB|Q3T148 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743
EMBL:BC102130 IPI:IPI00717799 RefSeq:NP_001030389.2 UniGene:Bt.5114
STRING:Q3T148 PRIDE:Q3T148 GeneID:515543 KEGG:bta:515543 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844
InParanoid:Q3T148 KO:K15030 OrthoDB:EOG4FFD21 NextBio:20871877
HAMAP:MF_03012 Uniprot:Q3T148
Length = 373
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 147/329 (44%), Positives = 218/329 (66%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II CD C ++ ++ D+ES
Sbjct: 4 PAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NS+VS+L+++ P++ E LI + EKL K + + + L++L LF ++ +P+RY
Sbjct: 63 VMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I+ + ++D +++ S + E K++ LLR
Sbjct: 123 VYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTL
Sbjct: 167 LLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPVKFLEGELIHDLL IFV+ K+ Y FY+ +K++I + LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVKFLEGELIHDLLTIFVSAKL-AYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGM 284
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SFD +Q+EL + + +EAF+ID
Sbjct: 285 AVENKEISFDTMQQELQIGADDVEAFVID 313
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 81/135 (60%), Positives = 103/135 (76%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 181 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ Y FY+ +K++I + LGL H++N+ KMRLLTFM +A E+SFD +Q+
Sbjct: 241 LTIFVSAKL-AYVKFYQNNKDFI-DSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQ 298
Query: 460 ELDLNPNQIEAFIID 474
EL + + +EAF+ID
Sbjct: 299 ELQIGADDVEAFVID 313
>ZFIN|ZDB-GENE-050913-52 [details] [associations]
symbol:zgc:114126 "zgc:114126" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-050913-52 HOVERGEN:HBG107844 EMBL:BC097184
IPI:IPI00610641 RefSeq:NP_001028904.1 UniGene:Dr.46267
GeneID:619250 KEGG:dre:619250 NextBio:20901469 Uniprot:Q4V8V4
Length = 370
Score = 446 (162.1 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 90/156 (57%), Positives = 117/156 (75%)
Query: 182 KQYRLLRMQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFL 240
K L R+ ++ L C ++E AAKV++ELL TYT ENASQA+EDAQ CI++ALADPNTFL
Sbjct: 136 KLQHLYRLIHEALLKCKESEKAAKVIMELLGTYTPENASQAKEDAQRCIVSALADPNTFL 195
Query: 241 LHPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMR 300
L PLL L PVK LEG IH+LL IFV + + TY FY ++KE+ V+ LGL H+EN+RKMR
Sbjct: 196 LDPLLALPPVKVLEGAPIHELLTIFVTDPLPTYLTFYNENKEF-VDSLGLSHEENVRKMR 254
Query: 301 LLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID 336
LLTFMQ+AE K E++FD +Q +L ++ + FIID
Sbjct: 255 LLTFMQMAEAKEELTFDEVQDQLQISEKDVHQFIID 290
Score = 431 (156.8 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 84/135 (62%), Positives = 107/135 (79%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
AAKV++ELL TYT ENASQA+EDAQ CI++ALADPNTFLL PLL L PVK LEG IH+L
Sbjct: 157 AAKVIMELLGTYTPENASQAKEDAQRCIVSALADPNTFLLDPLLALPPVKVLEGAPIHEL 216
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFV++ + TY FY ++KE+ V+ LGL H+EN+RKMRLLTFMQ+AE K E++FD +Q
Sbjct: 217 LTIFVTDPLPTYLTFYNENKEF-VDSLGLSHEENVRKMRLLTFMQMAEAKEELTFDEVQD 275
Query: 460 ELDLNPNQIEAFIID 474
+L ++ + FIID
Sbjct: 276 QLQISEKDVHQFIID 290
Score = 248 (92.4 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 54/131 (41%), Positives = 79/131 (60%)
Query: 27 LKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIESVLNSIVSMLVLINPERAE 86
+++LGA+I D ++DDL II C CFQ+ E ++E+ LNSI S+LV ++ R E
Sbjct: 1 MQSLGADIPDSSGV--LDDDLTHIIESCHFCFQENKELEMEAALNSITSLLVCMDMNRGE 58
Query: 87 NLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYHVYYHLVQIAQNADQIKSV 146
+L+ F +KL++ KL L+VL+LL+Q L+ S RY VY L+ +A QI SV
Sbjct: 59 SLVKKFCKKLTREQSKKLEISCLKVLYLLYQGLQTQSTPRYEVYCELIPLAGRTGQIMSV 118
Query: 147 FKDVDHLKQQF 157
F D LK+ F
Sbjct: 119 FTDTPTLKKSF 129
>ZFIN|ZDB-GENE-040426-2643 [details] [associations]
symbol:eif3m "eukaryotic translation initiation
factor 3, subunit M" species:7955 "Danio rerio" [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-2643 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 CTD:10480 eggNOG:NOG253821
HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030 OrthoDB:EOG4FFD21
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY398350 EMBL:CR936403 EMBL:BC053188 IPI:IPI00491150
RefSeq:NP_001019906.1 UniGene:Dr.25567 STRING:Q7T3B0 PRIDE:Q7T3B0
Ensembl:ENSDART00000010256 GeneID:334626 KEGG:dre:334626
InParanoid:Q1L885 NextBio:20810484 Bgee:Q7T3B0 Uniprot:Q7T3B0
Length = 375
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 146/329 (44%), Positives = 214/329 (65%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIES 68
P FID+ EDQA ELR YLK+ GAEIS+E S G+ DL +II CD C +D ++ D+ES
Sbjct: 4 PAFIDITEEDQASELRSYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKD-DDKDVES 62
Query: 69 VLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYH 128
V+NSIVS+L+++ E+ E LI + EKL K + + + +++L LF ++ +P+R+
Sbjct: 63 VMNSIVSLLLILETEKQEALIESLCEKLVKFREGERPSLRMQLLSNLFHGMDENTPVRHT 122
Query: 129 VYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLR 188
VY L+++A + I + D+D +++ + E K++ LLR
Sbjct: 123 VYCSLIKVAATCNAITFMPTDLDQVRKWIVDWNLNTE----------------KKHTLLR 166
Query: 189 MQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTL 247
+ ++ + C K+E AAKVM+ELL +YT +NASQAR DA CI+ AL DPNT+L LL L
Sbjct: 167 LVYEALVDCKKSEAAAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTYLFDHLLAL 226
Query: 248 KPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQL 307
KPV+FLEGELIHDLL IFV+ K+ +Y FY+ +K++I LGL H++N+ KMRLLTFM +
Sbjct: 227 KPVRFLEGELIHDLLTIFVSAKLISYVKFYQSNKDFI-ESLGLSHEQNMSKMRLLTFMGM 285
Query: 308 AETKTEMSFDMIQKELDLNPNQIEAFIID 336
A E+SF+ +Q+EL + +EAF+ID
Sbjct: 286 AVEMKEISFETMQQELQIGAEDVEAFVID 314
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 79/135 (58%), Positives = 102/135 (75%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
AAKVM+ELL +YT +NASQAR DA CI+ AL DPNT+L LL LKPV+FLEGELIHDL
Sbjct: 181 AAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTYLFDHLLALKPVRFLEGELIHDL 240
Query: 400 LNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQK 459
L IFVS K+ +Y FY+ +K++I LGL H++N+ KMRLLTFM +A E+SF+ +Q+
Sbjct: 241 LTIFVSAKLISYVKFYQSNKDFI-ESLGLSHEQNMSKMRLLTFMGMAVEMKEISFETMQQ 299
Query: 460 ELDLNPNQIEAFIID 474
EL + +EAF+ID
Sbjct: 300 ELQIGAEDVEAFVID 314
>RGD|1565840 [details] [associations]
symbol:Eif3m "eukaryotic translation initiation factor 3,
subunit M" species:10116 "Rattus norvegicus" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISO]
RGD:1565840 IPI:IPI00952457 Ensembl:ENSRNOT00000064134
UCSC:RGD:1565840 ArrayExpress:D4A654 Uniprot:D4A654
Length = 214
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 71/167 (42%), Positives = 107/167 (64%)
Query: 119 LEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXX 178
++ +P+RY VY L+++A + I+ + ++D +++ S + E
Sbjct: 1 MDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWKLTTE------------- 47
Query: 179 XASKQYRLLRMQTKSSL-CSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPN 237
K++ LLR+ ++ + C K++ A+KVM+ELL +YT +NASQAR DA CI+ AL DPN
Sbjct: 48 ---KKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPN 104
Query: 238 TFLLHPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYI 284
FL LLTLKPVKFLEGELIHDLL IFV+ K+ +Y FY+ +K++I
Sbjct: 105 AFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFI 151
Score = 279 (103.3 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 340 AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDL 399
A+KVM+ELL +YT +NASQAR DA CI+ AL DPN FL LLTLKPVKFLEGELIHDL
Sbjct: 69 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDL 128
Query: 400 LNIFVSEKVNTYQDFYKQHKEYI 422
L IFVS K+ +Y FY+ +K++I
Sbjct: 129 LTIFVSAKLASYVKFYQNNKDFI 151
>WB|WBGene00019543 [details] [associations]
symbol:cif-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0009792
GO:GO:0005737 GO:GO:0030154 GO:GO:0000003 GO:GO:0048477
GO:GO:0003743 GO:GO:0008180 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 EMBL:FO081041 PIR:T30020 RefSeq:NP_500618.1
ProteinModelPortal:Q94261 SMR:Q94261 DIP:DIP-27147N IntAct:Q94261
MINT:MINT-1039802 STRING:Q94261 PaxDb:Q94261
EnsemblMetazoa:K08F11.3.1 EnsemblMetazoa:K08F11.3.2
EnsemblMetazoa:K08F11.3.3 EnsemblMetazoa:K08F11.3.4 GeneID:177236
KEGG:cel:CELE_K08F11.3 UCSC:K08F11.3.1 CTD:177236 WormBase:K08F11.3
GeneTree:ENSGT00390000004456 HOGENOM:HOG000112352 InParanoid:Q94261
OMA:PNTFLLD NextBio:895926 Uniprot:Q94261
Length = 390
Score = 286 (105.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 94/338 (27%), Positives = 166/338 (49%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDAC-FQDANEADIE 67
PVF + Q ELR YL S + G + +I +C + D++
Sbjct: 8 PVFAYIDDVKQLQELRQYLNK---HDSVKLDPNGPSETAQNMIEICSTLNVLPSWSQDVD 64
Query: 68 SVLNSIVSMLVLINPERAENLILAFSEKLS----KASD-AKLGPVTLRVLWLLFQSLEPT 122
VLNSI S++V++ E+ E ++ +F + ++ K + A + +RVL L++
Sbjct: 65 LVLNSISSLIVVVPGEKCEPVVDSFIKNVAPQFYKGTGWASHAGIAVRVLSNLYKGYSNF 124
Query: 123 SPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASK 182
++ ++ LV + A I + +++ L+ +F+ E
Sbjct: 125 HTVQEKIFKALVDMCAEARLIGELECNLETLQDRFNTWKTPVEG---------------- 168
Query: 183 QYRLLRMQTKSSLCS-KTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLL 241
Q +LR ++ L + + AAKVM LL TYT ++A+ AR+DA C+ A+ DP +F
Sbjct: 169 QREILRAVHRALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSF 228
Query: 242 HPLLTLKPVKFLEGE--LIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKM 299
L L VK L+ L+ L +F++ + Y++F ++ +++ L +D L+K+
Sbjct: 229 DHLERLSAVKALKTSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKI 288
Query: 300 RLLTFMQLAETKTEMSFDMIQKELDLNPNQ-IEAFIID 336
RLLT M LAE K E+S D + K+LD+ ++ +E F+ID
Sbjct: 289 RLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVID 326
Score = 251 (93.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 56/148 (37%), Positives = 90/148 (60%)
Query: 332 AFIIDGKI--AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVK 389
A ++D ++ AAKVM LL TYT ++A+ AR+DA C+ A+ DP +F L L VK
Sbjct: 179 ALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSFDHLERLSAVK 238
Query: 390 FLEGE--LIHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAE 447
L+ L+ L +F+S + Y++F ++ +++ L +D L+K+RLLT M LAE
Sbjct: 239 ALKTSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKIRLLTLMSLAE 298
Query: 448 TKTEMSFDMIQKELDLNPNQ-IEAFIID 474
K E+S D + K+LD+ ++ +E F+ID
Sbjct: 299 EKNEISLDELAKQLDILADETLEEFVID 326
>UNIPROTKB|Q94261 [details] [associations]
symbol:cif-1 "COP9/Signalosome and eIF3 complex-shared
subunit 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0030154
GO:GO:0000003 GO:GO:0048477 GO:GO:0003743 GO:GO:0008180
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 EMBL:FO081041 PIR:T30020
RefSeq:NP_500618.1 ProteinModelPortal:Q94261 SMR:Q94261
DIP:DIP-27147N IntAct:Q94261 MINT:MINT-1039802 STRING:Q94261
PaxDb:Q94261 EnsemblMetazoa:K08F11.3.1 EnsemblMetazoa:K08F11.3.2
EnsemblMetazoa:K08F11.3.3 EnsemblMetazoa:K08F11.3.4 GeneID:177236
KEGG:cel:CELE_K08F11.3 UCSC:K08F11.3.1 CTD:177236 WormBase:K08F11.3
GeneTree:ENSGT00390000004456 HOGENOM:HOG000112352 InParanoid:Q94261
OMA:PNTFLLD NextBio:895926 Uniprot:Q94261
Length = 390
Score = 286 (105.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 94/338 (27%), Positives = 166/338 (49%)
Query: 9 PVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDAC-FQDANEADIE 67
PVF + Q ELR YL S + G + +I +C + D++
Sbjct: 8 PVFAYIDDVKQLQELRQYLNK---HDSVKLDPNGPSETAQNMIEICSTLNVLPSWSQDVD 64
Query: 68 SVLNSIVSMLVLINPERAENLILAFSEKLS----KASD-AKLGPVTLRVLWLLFQSLEPT 122
VLNSI S++V++ E+ E ++ +F + ++ K + A + +RVL L++
Sbjct: 65 LVLNSISSLIVVVPGEKCEPVVDSFIKNVAPQFYKGTGWASHAGIAVRVLSNLYKGYSNF 124
Query: 123 SPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXXXXASK 182
++ ++ LV + A I + +++ L+ +F+ E
Sbjct: 125 HTVQEKIFKALVDMCAEARLIGELECNLETLQDRFNTWKTPVEG---------------- 168
Query: 183 QYRLLRMQTKSSLCS-KTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLL 241
Q +LR ++ L + + AAKVM LL TYT ++A+ AR+DA C+ A+ DP +F
Sbjct: 169 QREILRAVHRALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSF 228
Query: 242 HPLLTLKPVKFLEGE--LIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKM 299
L L VK L+ L+ L +F++ + Y++F ++ +++ L +D L+K+
Sbjct: 229 DHLERLSAVKALKTSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKI 288
Query: 300 RLLTFMQLAETKTEMSFDMIQKELDLNPNQ-IEAFIID 336
RLLT M LAE K E+S D + K+LD+ ++ +E F+ID
Sbjct: 289 RLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVID 326
Score = 251 (93.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 56/148 (37%), Positives = 90/148 (60%)
Query: 332 AFIIDGKI--AAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVK 389
A ++D ++ AAKVM LL TYT ++A+ AR+DA C+ A+ DP +F L L VK
Sbjct: 179 ALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSFDHLERLSAVK 238
Query: 390 FLEGE--LIHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAE 447
L+ L+ L +F+S + Y++F ++ +++ L +D L+K+RLLT M LAE
Sbjct: 239 ALKTSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKIRLLTLMSLAE 298
Query: 448 TKTEMSFDMIQKELDLNPNQ-IEAFIID 474
K E+S D + K+LD+ ++ +E F+ID
Sbjct: 299 EKNEISLDELAKQLDILADETLEEFVID 326
>DICTYBASE|DDB_G0287005 [details] [associations]
symbol:DDB_G0287005 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0287005 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AAFI02000095 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 RefSeq:XP_637434.1 STRING:Q54KZ8
EnsemblProtists:DDB0238518 GeneID:8625903 KEGG:ddi:DDB_G0287005
OMA:IQANKVT Uniprot:Q54KZ8
Length = 401
Score = 246 (91.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 82/347 (23%), Positives = 179/347 (51%)
Query: 10 VFIDLL-LEDQALELRVYLKNL----GAE--ISDEKSTKGIE---DDLHKIIG-VCDACF 58
+FIDL LED +L +++ L G+E ++D + G + + L KI+ + F
Sbjct: 3 IFIDLASLEDLYNDLISHIETLRKKKGSEYSVADYQILIGEQRTVEFLSKIVSNETEFLF 62
Query: 59 QDANEAD--IESVLNSIVSMLVLINPERAENLILA-FSEKLSKASDAKLGPVTLRVLWLL 115
++ ++D IE N I+++L + E N++ + LS A + + +++L L
Sbjct: 63 KECKDSDKDIEGFFNVILTILHKLENEDEINIVSQKIRDSLS-AHPTENSQLKIKILTNL 121
Query: 116 FQSLEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXX 175
F S +P S RY +++ LV++A +++ ++ V + + S +Q +K
Sbjct: 122 FNSFQPKSTQRYDIFFALVKLASDSNNLEFVKYQITDIDSWLEDWNVSIQQKRKL----- 176
Query: 176 XXXXASKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALAD 235
Y+L+ K + L+ + +++ L T+T E++ +A+EDA + +++
Sbjct: 177 --------YKLISNIFKEK---QRMLSHQFLVKYLQTFTKEDSQEAQEDAVRVCIESISL 225
Query: 236 PNTFLLHPLLTLKPVKFLEGE------LIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLG 289
+ LL L V++LEG L ++L+ IF E+++++ F +++ ++ + +G
Sbjct: 226 QELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFL-STIG 284
Query: 290 LDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID 336
L + + L+K+RLL+ L ++++ + +I K L ++ N++E ++I+
Sbjct: 285 LSNDDCLQKIRLLSLATLTSEQSKVPYSLISKMLQIDENEVEMWVIN 331
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 35/142 (24%), Positives = 87/142 (61%)
Query: 339 IAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGE---- 394
++ + +++ L T+T E++ +A+EDA + +++ + LL L V++LEG
Sbjct: 191 LSHQFLVKYLQTFTKEDSQEAQEDAVRVCIESISLQELYQSDYLLDLPAVQYLEGSTVSA 250
Query: 395 --LIHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEM 452
L ++L+ IF +E+++++ F +++ ++ + +GL + + L+K+RLL+ L ++++
Sbjct: 251 NSLTYELMKIFATEQLDSFLQFQQKNPNFL-STIGLSNDDCLQKIRLLSLATLTSEQSKV 309
Query: 453 SFDMIQKELDLNPNQIEAFIID 474
+ +I K L ++ N++E ++I+
Sbjct: 310 PYSLISKMLQIDENEVEMWVIN 331
>UNIPROTKB|A4RK68 [details] [associations]
symbol:MGG_01595 "Eukaryotic translation initiation factor
3 subunit M" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003743 EMBL:CM001232 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OrthoDB:EOG441TM5 RefSeq:XP_003714574.1
STRING:A4RK68 EnsemblFungi:MGG_01595T0 GeneID:2679451
KEGG:mgr:MGG_01595 Uniprot:A4RK68
Length = 432
Score = 206 (77.6 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 93/350 (26%), Positives = 157/350 (44%)
Query: 1 MTAVVQPPPVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQD 60
MTA QP VF+D + A ++ L+ + EI ++ + L KI+
Sbjct: 1 MTASYQPQLVFVDGSFAELAQDMASVLQ-ISDEIQPLLDSEKESEALTKIVSESKK-LNA 58
Query: 61 ANEADIESVLNSIVSMLVLINPERAENLILAFSEKLSK--ASDAKLGP-VTLRVLWLLFQ 117
E + N +V LVL + E ++L + L++ S + G + L L +F
Sbjct: 59 IPEKEFTGAYNLLVH-LVLQSKEPKKHLP-TICQNLTRPVTSSPQHGAQLALFELTSIFN 116
Query: 118 SLEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXX 177
L+P P+R++V+ +++ + I S+ DHLK Q P + +
Sbjct: 117 LLKPNDPVRFNVFIQIIRFYK----IHSI-PISDHLKSALKQLPRWLQSWE------LDE 165
Query: 178 XXASKQY-RLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQ-AREDAQACILAAL-- 233
K Y ++ + T + + E A + +++ L T+ +E+A E+AQ L AL
Sbjct: 166 EDQRKMYSEVIEVMTAAG---EEEEAYQHILKALRTFDSEDAEDYTSEEAQQLALRALRS 222
Query: 234 --ADPNTFLLHPLLTLKPVKFL-EGELIH-DLLNIFVAEKVNTYQDFYKQHKEYIVNKLG 289
+ P + L V L E +H LL IF + ++ Y DF ++H+ +I K
Sbjct: 223 AISSPTRLSFEDIRALPAVHALSESHPVHYQLLQIFGEQDLDDYDDFREEHEGFI-EKEN 281
Query: 290 LDHQENLRKMRLLTFMQLAETKT---EMSFDMIQKELDLNPNQIEAFIID 336
LD++ RKMRLLTF LA E+S++ I K L + +E + ID
Sbjct: 282 LDNEVLYRKMRLLTFASLAAASMQTREISYNSITKALQIPSEDVEMWAID 331
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 61/228 (26%), Positives = 102/228 (44%)
Query: 258 IHDLLNIFVAEKVNT---YQDFYKQHKEYIVNKLGL-DHQENLRKM--RLLTFMQLAETK 311
+ +L +IF K N + F + + Y ++ + + DH ++ K R L +L E
Sbjct: 108 LFELTSIFNLLKPNDPVRFNVFIQIIRFYKIHSIPISDHLKSALKQLPRWLQSWELDEED 167
Query: 312 TEMSFDMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTAENASQAREDAQACILAAL 371
+ + + + + EA+ K E YT+E A Q A + +A+
Sbjct: 168 QRKMYSEVIEVMTAAGEEEEAYQHILKALRTFDSEDAEDYTSEEAQQL---ALRALRSAI 224
Query: 372 ADPNTFLLHPLLTLKPVKFL-EGELIH-DLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLD 429
+ P + L V L E +H LL IF + ++ Y DF ++H+ +I K LD
Sbjct: 225 SSPTRLSFEDIRALPAVHALSESHPVHYQLLQIFGEQDLDDYDDFREEHEGFI-EKENLD 283
Query: 430 HQENLRKMRLLTFMQLAETKT---EMSFDMIQKELDLNPNQIEAFIID 474
++ RKMRLLTF LA E+S++ I K L + +E + ID
Sbjct: 284 NEVLYRKMRLLTFASLAAASMQTREISYNSITKALQIPSEDVEMWAID 331
>TAIR|locus:2076517 [details] [associations]
symbol:AT3G02200 "AT3G02200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000502 UniGene:At.41171 eggNOG:NOG253821 KO:K15030
OMA:IQANKVT EMBL:AY062722 EMBL:AY093343 IPI:IPI00518990
RefSeq:NP_186869.2 UniGene:At.21256 UniGene:At.67677
UniGene:At.73005 ProteinModelPortal:Q8W4A0 STRING:Q8W4A0
PaxDb:Q8W4A0 PRIDE:Q8W4A0 DNASU:821267 EnsemblPlants:AT3G02200.2
GeneID:821267 KEGG:ath:AT3G02200 TAIR:At3g02200
HOGENOM:HOG000005880 InParanoid:Q8W4A0 PhylomeDB:Q8W4A0
ProtClustDB:CLSN2687479 Genevestigator:Q8W4A0 Uniprot:Q8W4A0
Length = 417
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 67/296 (22%), Positives = 143/296 (48%)
Query: 62 NEADIESVLNSIVSMLVLI-NPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLE 120
+E D+E I S++ +PE+ ++ A + K+++ K + L++L+ L+ ++
Sbjct: 72 SEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKAS-LRLKILFNLYNLVD 130
Query: 121 -PTSPMRYHVYYHLVQIAQNA---DQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXX 176
P + R+ VY + +A + + I S FK +D+ +++ N ++
Sbjct: 131 HPYA--RFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEW------NIDIKDQRELFLA 182
Query: 177 XXXASKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENAS---QAREDAQACILAAL 233
K+ + L SL K + + L+T++ E+A +A+E+A ++ +
Sbjct: 183 IANVLKENKSL---VNESL--------KFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFV 231
Query: 234 ADPNTFLLHPLLTLKPVKFLEGEL----IHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLG 289
+ F LL L V LE + ++ LL IF+ +++N Y +F + ++ G
Sbjct: 232 KASSIFQCD-LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFL-QSYG 289
Query: 290 LDHQENLRKMRLLTFMQLAETKT-EMSFDMIQKELDLNPNQIEAFIIDGKIAAKVM 344
L +++ + KMRLL+ + LA ++ ++ + I+ L +N +E +I+ I AK++
Sbjct: 290 LSNEDCVTKMRLLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKA-ITAKLI 344
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/140 (25%), Positives = 77/140 (55%)
Query: 342 KVMIELLSTYTAENAS---QAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGEL--- 395
K + + L+T++ E+A +A+E+A ++ + + F LL L V LE +
Sbjct: 199 KFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD-LLDLPAVAQLEKDAKYA 257
Query: 396 -IHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKT-EMS 453
++ LL IF+++++N Y +F + ++ GL +++ + KMRLL+ + LA ++ ++
Sbjct: 258 PVYQLLKIFLTQRLNAYTEFQNANSGFL-QSYGLSNEDCVTKMRLLSLVDLASDESGKIP 316
Query: 454 FDMIQKELDLNPNQIEAFII 473
+ I+ L +N +E +I+
Sbjct: 317 YTSIKDTLQVNEQDVELWIV 336
>TAIR|locus:2180917 [details] [associations]
symbol:AT5G15610 "AT5G15610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
EMBL:CP002688 GO:GO:0000502 EMBL:AL391143 KO:K15030
HOGENOM:HOG000005880 ProtClustDB:CLSN2687479 EMBL:AY099844
EMBL:BT000340 IPI:IPI00545684 PIR:T51539 RefSeq:NP_197065.1
UniGene:At.25003 ProteinModelPortal:Q9LF21 SMR:Q9LF21 PRIDE:Q9LF21
EnsemblPlants:AT5G15610.1 GeneID:831413 KEGG:ath:AT5G15610
TAIR:At5g15610 InParanoid:Q9LF21 OMA:RCAEREF PhylomeDB:Q9LF21
Genevestigator:Q9LF21 Uniprot:Q9LF21
Length = 442
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 65/295 (22%), Positives = 144/295 (48%)
Query: 62 NEADIESVLNSIVSMLVLIN-PERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLE 120
+E D+E I +++ N PE ++ A + K+ + + K + L++L+ L+ ++
Sbjct: 72 SEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKAS-LRLKILFNLYNLVD 130
Query: 121 PTSPMRYHVYYHLVQIAQNA---DQIKSVFKDVDHLKQQFSQCPPSNEQMQKXXXXXXXX 177
+ R+ VY +++A N + I FK +D ++++ +Q +
Sbjct: 131 HPNA-RFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNI--DIKDQRELFLAIA--- 184
Query: 178 XXASKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENA---SQAREDAQACILAALA 234
++LR + KS +K L + + L+T++ E+ S+A+E+A ++ +
Sbjct: 185 -------KVLR-ENKSF--AKESL--QFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVK 232
Query: 235 DPNTF---LL-HPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGL 290
P+ F LL HP + + K ++ LL IF+ ++++ Y +F + ++ GL
Sbjct: 233 APSIFQCDLLDHPAVA-QLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFL-QTYGL 290
Query: 291 DHQENLRKMRLLTFMQLAETKT-EMSFDMIQKELDLNPNQIEAFIIDGKIAAKVM 344
++ + KMRLL+ + LA + ++ + I+ L +N ++E +++ I AK++
Sbjct: 291 VEEDCVAKMRLLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKA-ITAKLV 344
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 44/184 (23%), Positives = 94/184 (51%)
Query: 303 TFMQLAETKTEMSFDMI-QKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTA----ENA- 356
+F ++ E + D+ Q+EL L I + + K AK ++ ++ Y A E+
Sbjct: 158 SFKKIDSFLKEWNIDIKDQRELFL---AIAKVLRENKSFAKESLQFVTNYLATFSNEDTQ 214
Query: 357 --SQAREDAQACILAALADPNTF---LL-HPLLTLKPVKFLEGELIHDLLNIFVSEKVNT 410
S+A+E+A ++ + P+ F LL HP + + K ++ LL IF++++++
Sbjct: 215 VLSEAKEEAVRAVIEFVKAPSIFQCDLLDHPAVA-QLEKDPNNAPVYQLLKIFLTQRLDA 273
Query: 411 YQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKT-EMSFDMIQKELDLNPNQIE 469
Y +F + ++ GL ++ + KMRLL+ + LA + ++ + I+ L +N ++E
Sbjct: 274 YMEFQNANSGFL-QTYGLVEEDCVAKMRLLSLVDLASDDSGKIPYASIKNTLQVNDEEVE 332
Query: 470 AFII 473
+++
Sbjct: 333 LWVV 336
>ASPGD|ASPL0000017804 [details] [associations]
symbol:AN4259 species:162425 "Emericella nidulans"
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006413
"translational initiation" evidence=IEA] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 EMBL:BN001302 GO:GO:0003743 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OMA:IQANKVT EMBL:AACD01000069
RefSeq:XP_661863.1 EnsemblFungi:CADANIAT00004396 GeneID:2873678
KEGG:ani:AN4259.2 HOGENOM:HOG000234940 OrthoDB:EOG441TM5
Uniprot:Q5B5C1
Length = 459
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 77/338 (22%), Positives = 141/338 (41%)
Query: 33 EISDEKSTKGIEDDLHKIIGVCDACFQDANEADIESVLNSIVSMLVLIN-PERAENLILA 91
E +D + + D++ K + A E +I N ++ ++ + P+ + I +
Sbjct: 51 EQNDTQLDQSKRDEVLKKLVSAATVLNTAPEKEITPAYNLLIHLVQQASDPDMFLSRICS 110
Query: 92 FSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVD 151
+ K +S +++ +L +F +L PT R+HV +V + + + + F D
Sbjct: 111 YLAKPIPSSPQFGASLSIAILSTIFNTLAPTDSSRFHVLLAIVTVIRQSGS-SAAF---D 166
Query: 152 HLKQQFSQCPPSNEQMQKXXXXXXXXXXASKQYRLLRMQTKSSLCSKTELAAKVMIELLS 211
LK Q + Q+ +++ L + + + A +++ L
Sbjct: 167 ALKPQLTA------QLPNWRSTWELDDEEARRLHLA-IADAAQAAGDLDWAQTHVVDALQ 219
Query: 212 TYTAENASQ--AREDAQACILAALADPNTFLLHPLLTLKPVKFLEGE--LIHDLLNIFVA 267
T AS AR+ A + +AL P F PL V+ L + +LL IF A
Sbjct: 220 TIPPAEASSPAARDLAVRALTSALTHPAVFDFTPLTAADAVQALRSSDAPLFELLEIFTA 279
Query: 268 EKVNTYQDFYKQHK-EYIVNKLGL-DHQENLR-KMRLLTFMQLAETKT--------EMSF 316
+ ++ Y+DF E I+ L H E L+ K+RLLT LA T +S+
Sbjct: 280 DTLDAYEDFISATPVENILPDNALAPHAEALQTKIRLLTLASLAAAATTTTGPSARSLSY 339
Query: 317 DMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTAE 354
+ I L + ++E ++ID I A ++ LS +E
Sbjct: 340 ETIASALRVPQEEVEKWVID-TIRAGLVEGKLSQLRSE 376
>POMBASE|SPAC1751.03 [details] [associations]
symbol:SPAC1751.03 "translation initiation factor eIF3m"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IDA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IC]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 PomBase:SPAC1751.03
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003743 GO:GO:0002183 GO:GO:0016282 GO:GO:0071541 KO:K15030
HAMAP:MF_03012 OMA:IQANKVT OrthoDB:EOG441TM5 EMBL:AB016218
PIR:T43387 PIR:T50090 RefSeq:NP_592913.2 STRING:Q09722
EnsemblFungi:SPAC1751.03.1 GeneID:2542347 KEGG:spo:SPAC1751.03
NextBio:20803407 Uniprot:Q09722
Length = 402
Score = 116 (45.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 209 LLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVAE 268
LL +N S A E + + A+ P F ++TL PV+ LE + LL I
Sbjct: 196 LLEAVKMDN-STADEAVRELVQRAVNSPKYFFFDDIVTLPPVQQLEQSTLQ-LLGILSGG 253
Query: 269 KVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAET--KTEMSFDMIQKELDLN 326
+ Y + ++ + ++ D RKM+LLT LA +S+ + K L ++
Sbjct: 254 MTDDYVSWVAENHAHCQHQK-FDEDAIARKMKLLTIASLATQAPNNTLSYGDVAKSLKID 312
Query: 327 PNQIEAFIIDGKIAAKV---MIELLSTYTAENAS 357
N++E +IID A V M +L T + +S
Sbjct: 313 ENEVELWIIDVIRAGLVEGRMSQLTKTLSIHRSS 346
Score = 115 (45.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 347 LLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVSE 406
LL +N S A E + + A+ P F ++TL PV+ LE + LL I
Sbjct: 196 LLEAVKMDN-STADEAVRELVQRAVNSPKYFFFDDIVTLPPVQQLEQSTLQ-LLGILSGG 253
Query: 407 KVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAET--KTEMSFDMIQKELDLN 464
+ Y + ++ + ++ D RKM+LLT LA +S+ + K L ++
Sbjct: 254 MTDDYVSWVAENHAHCQHQK-FDEDAIARKMKLLTIASLATQAPNNTLSYGDVAKSLKID 312
Query: 465 PNQIEAFIID 474
N++E +IID
Sbjct: 313 ENEVELWIID 322
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 12 IDLLLEDQALELRVYLKNLGAEIS--------DEKSTKGIEDDLHKIIGVCDACFQDANE 63
+D +E+Q EL +YL NL A + +++ +++ L+ + Q A E
Sbjct: 10 VDSSVEEQVEELAMYLDNLEANTDKNVLALCREYLASENVKEVLNLFLTRLPLLAQ-APE 68
Query: 64 ADIESVLNSIVSMLVLINPERA-ENLILAFSEKLSKASDAK--LGPVTLRVLWLLFQS 118
++E +L ++ LI A E+ + F + L + +D L P L VL +LF +
Sbjct: 69 KELEPILAVFIN---LIQESAAFEDHVSKFCQALEQIADQNNNLTPAILSVLSILFNT 123
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 259 HDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDH 292
H NIFV++ + +Y D +Q +++ + +D+
Sbjct: 173 HRAFNIFVSKAIQSYDD--EQSFAFLLEAVKMDN 204
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 474 464 0.00097 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 609 (65 KB)
Total size of DFA: 233 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:07
No. of threads or processors used: 24
Search cpu time: 39.14u 0.08s 39.22t Elapsed: 00:00:07
Total cpu time: 39.15u 0.08s 39.23t Elapsed: 00:00:14
Start: Thu Aug 15 13:01:58 2013 End: Thu Aug 15 13:02:12 2013