RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11709
         (474 letters)



>d3e2ba1 d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fruit fly
           (Drosophila melanogaster) [TaxId: 7227]}
          Length = 87

 Score = 25.8 bits (57), Expect = 3.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 312 TEMSFDMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTY 351
            +MS +M Q  +D     +E + I+  IAA +  E    Y
Sbjct: 9   ADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKY 48


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.134    0.373 

Gapped
Lambda     K      H
   0.267   0.0675    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,633,507
Number of extensions: 75109
Number of successful extensions: 216
Number of sequences better than 10.0: 1
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 14
Length of query: 474
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 385
Effective length of database: 1,185,626
Effective search space: 456466010
Effective search space used: 456466010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.1 bits)