Query psy11714
Match_columns 272
No_of_seqs 135 out of 2693
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 17:05:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11714.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11714hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-36 4.4E-41 252.4 24.3 216 34-270 38-284 (285)
2 1oy3_D Transcription factor in 100.0 6.8E-37 2.3E-41 254.2 21.7 218 33-271 7-257 (282)
3 4g8k_A 2-5A-dependent ribonucl 100.0 2.4E-36 8.2E-41 257.8 23.9 208 34-267 24-329 (337)
4 3utm_A Tankyrase-1; tankyrase, 100.0 3.3E-36 1.1E-40 257.3 23.5 210 36-271 25-312 (351)
5 3ljn_A Hypothetical protein; a 100.0 4.7E-37 1.6E-41 264.9 17.3 215 31-266 16-271 (364)
6 3d9h_A CDNA FLJ77766, highly s 100.0 9.8E-37 3.3E-41 254.7 18.4 212 29-270 53-285 (285)
7 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-35 5.7E-40 245.7 25.6 211 34-271 4-252 (285)
8 3aji_A 26S proteasome non-ATPa 100.0 1.4E-36 4.7E-41 245.5 18.0 205 35-265 6-231 (231)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 3.8E-36 1.3E-40 246.7 20.3 209 32-267 7-251 (253)
10 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-35 4.1E-40 262.0 23.0 208 37-271 148-376 (437)
11 2xai_A ASB-9, ankyrin repeat a 100.0 4.9E-36 1.7E-40 247.2 19.0 202 35-266 3-224 (261)
12 3d9h_A CDNA FLJ77766, highly s 100.0 2.2E-35 7.5E-40 246.5 21.4 217 33-272 13-255 (285)
13 1k1a_A B-cell lymphoma 3-encod 100.0 7.6E-35 2.6E-39 236.5 23.8 191 32-270 6-214 (241)
14 1n11_A Ankyrin; clathrin, BAND 100.0 4.8E-35 1.6E-39 258.1 23.3 227 33-271 12-277 (437)
15 3b7b_A Euchromatic histone-lys 100.0 1.3E-34 4.5E-39 234.7 23.1 175 32-218 8-204 (237)
16 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-34 3.9E-39 247.5 23.8 185 35-219 59-329 (337)
17 3kea_A K1L; tropism, ANK repea 100.0 1.2E-35 4E-40 248.1 17.2 198 45-270 9-226 (285)
18 3eu9_A Huntingtin-interacting 100.0 6.4E-35 2.2E-39 236.4 20.7 209 33-268 7-239 (240)
19 2fo1_E LIN-12 protein; beta-ba 100.0 6.1E-35 2.1E-39 252.7 17.8 206 33-265 123-372 (373)
20 2dzn_A Probable 26S proteasome 100.0 7.5E-34 2.6E-38 228.9 22.8 186 36-271 3-207 (228)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 5.4E-35 1.8E-39 239.8 15.3 186 66-272 2-223 (253)
22 2f8y_A Notch homolog 1, transl 100.0 1.3E-33 4.3E-38 226.9 22.9 183 33-268 23-220 (223)
23 2rfa_A Transient receptor pote 100.0 4E-34 1.4E-38 231.3 19.9 202 35-269 3-227 (232)
24 1s70_B 130 kDa myosin-binding 100.0 1.2E-33 4.3E-38 236.7 21.2 200 34-261 39-286 (299)
25 4b93_B Ankyrin repeat domain-c 100.0 4.5E-34 1.5E-38 236.5 17.6 212 34-266 10-246 (269)
26 3utm_A Tankyrase-1; tankyrase, 100.0 4.7E-33 1.6E-37 237.7 24.5 209 33-266 56-336 (351)
27 3hra_A Ankyrin repeat family p 100.0 3.4E-33 1.2E-37 220.8 20.7 178 34-262 4-201 (201)
28 4gpm_A Engineered protein OR26 100.0 5.1E-33 1.7E-37 214.3 20.1 157 34-269 3-166 (169)
29 2xai_A ASB-9, ankyrin repeat a 100.0 7E-33 2.4E-37 228.3 19.6 177 73-272 2-199 (261)
30 2fo1_E LIN-12 protein; beta-ba 100.0 3.9E-34 1.3E-38 247.7 11.3 209 33-271 92-345 (373)
31 1ikn_D Protein (I-kappa-B-alph 100.0 3.2E-34 1.1E-38 232.6 8.7 191 33-266 6-211 (236)
32 2etb_A Transient receptor pote 100.0 1.9E-33 6.4E-38 230.8 12.5 198 36-266 3-248 (256)
33 2pnn_A Transient receptor pote 100.0 3.4E-33 1.1E-37 231.5 13.2 211 31-269 9-264 (273)
34 3kea_A K1L; tropism, ANK repea 100.0 1.5E-33 5.1E-38 235.4 10.7 200 32-269 28-251 (285)
35 2f8y_A Notch homolog 1, transl 100.0 2.6E-32 8.8E-37 219.2 16.8 174 46-271 2-190 (223)
36 3aji_A 26S proteasome non-ATPa 100.0 1.3E-31 4.4E-36 216.3 20.0 180 72-272 4-205 (231)
37 4b93_B Ankyrin repeat domain-c 100.0 3.9E-33 1.3E-37 230.9 10.7 173 34-218 51-246 (269)
38 3ljn_A Hypothetical protein; a 100.0 1.5E-32 5.2E-37 236.6 12.9 184 65-271 11-243 (364)
39 1k1a_A B-cell lymphoma 3-encod 100.0 4.6E-32 1.6E-36 220.1 14.5 178 33-263 44-240 (241)
40 3jxi_A Vanilloid receptor-rela 100.0 5.8E-33 2E-37 228.3 9.3 202 35-268 5-254 (260)
41 3b7b_A Euchromatic histone-lys 100.0 3.3E-30 1.1E-34 208.8 19.6 168 33-212 42-231 (237)
42 1oy3_D Transcription factor in 100.0 2.2E-30 7.5E-35 214.8 17.6 158 67-271 2-224 (282)
43 3eu9_A Huntingtin-interacting 100.0 4.7E-30 1.6E-34 207.7 17.6 185 67-271 2-209 (240)
44 2dzn_A Probable 26S proteasome 100.0 1E-29 3.4E-34 204.7 17.1 175 33-261 34-227 (228)
45 2rfm_A Putative ankyrin repeat 100.0 5.2E-30 1.8E-34 201.4 14.7 150 66-262 27-190 (192)
46 4hbd_A KN motif and ankyrin re 100.0 3.5E-30 1.2E-34 213.9 13.1 174 39-263 80-274 (276)
47 2rfa_A Transient receptor pote 100.0 1.6E-28 5.6E-33 198.2 19.6 152 73-266 2-185 (232)
48 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.6E-29 1.2E-33 191.0 14.7 150 35-264 5-162 (162)
49 1ikn_D Protein (I-kappa-B-alph 100.0 5.4E-30 1.8E-34 207.7 10.4 156 69-271 3-183 (236)
50 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.1E-28 3.9E-33 189.9 16.8 151 33-262 12-169 (169)
51 3v30_A DNA-binding protein rfx 100.0 4.9E-29 1.7E-33 192.3 14.0 157 36-270 3-166 (172)
52 1sw6_A Regulatory protein SWI6 100.0 2.8E-29 9.7E-34 213.4 13.2 174 39-272 101-316 (327)
53 1s70_B 130 kDa myosin-binding 100.0 2.3E-29 7.8E-34 210.8 12.1 174 33-213 71-286 (299)
54 3v31_A Ankyrin repeat family A 100.0 9E-29 3.1E-33 189.9 14.2 152 36-266 4-162 (167)
55 3v30_A DNA-binding protein rfx 100.0 2.7E-28 9.1E-33 188.2 15.1 123 30-190 31-160 (172)
56 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-27 6.5E-32 183.1 17.9 119 32-188 44-169 (169)
57 3hra_A Ankyrin repeat family p 100.0 2.6E-27 9E-32 186.9 19.0 153 72-271 3-177 (201)
58 3f6q_A Integrin-linked protein 100.0 4.9E-28 1.7E-32 188.0 14.0 157 35-269 5-168 (179)
59 1ihb_A P18-INK4C(INK6), cyclin 100.0 6.2E-28 2.1E-32 184.2 14.4 124 29-190 32-162 (162)
60 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-27 4.3E-32 183.1 15.3 153 32-263 5-164 (165)
61 1awc_B Protein (GA binding pro 100.0 2.8E-27 9.4E-32 179.1 16.6 143 36-258 3-152 (153)
62 3v31_A Ankyrin repeat family A 99.9 3E-27 1E-31 181.4 15.0 123 29-189 30-159 (167)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-28 6.3E-33 199.3 8.1 151 72-269 3-169 (239)
64 2etb_A Transient receptor pote 99.9 1.9E-27 6.6E-32 194.9 12.8 163 73-271 1-220 (256)
65 4gpm_A Engineered protein OR26 99.9 1E-26 3.5E-31 179.0 15.9 127 99-272 3-136 (169)
66 2pnn_A Transient receptor pote 99.9 9.7E-28 3.3E-32 198.6 10.6 167 65-267 4-221 (273)
67 2rfm_A Putative ankyrin repeat 99.9 6.9E-27 2.4E-31 183.5 14.9 146 31-214 31-190 (192)
68 3f6q_A Integrin-linked protein 99.9 6.5E-27 2.2E-31 181.7 13.7 125 29-191 33-164 (179)
69 2aja_A Ankyrin repeat family p 99.9 4.4E-29 1.5E-33 215.4 1.4 196 35-263 92-343 (376)
70 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.7E-26 1.9E-30 172.2 18.0 146 36-261 3-155 (156)
71 1awc_B Protein (GA binding pro 99.9 7E-26 2.4E-30 171.3 17.1 115 32-184 31-152 (153)
72 3jxi_A Vanilloid receptor-rela 99.9 8.3E-27 2.8E-31 191.5 11.3 160 71-266 2-212 (260)
73 1sw6_A Regulatory protein SWI6 99.9 1.6E-26 5.4E-31 196.4 10.4 180 32-250 128-327 (327)
74 2vge_A RELA-associated inhibit 99.9 2.9E-29 9.8E-34 202.9 -7.6 172 34-259 20-208 (229)
75 1d9s_A Cyclin-dependent kinase 99.9 1.5E-25 5.3E-30 166.2 11.5 127 64-264 2-136 (136)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.9E-26 6.4E-31 187.4 4.7 181 35-262 5-202 (239)
77 3t8k_A Uncharacterized protein 99.9 1E-25 3.6E-30 176.1 8.4 158 35-269 6-184 (186)
78 4hbd_A KN motif and ankyrin re 99.9 1.2E-24 4E-29 180.6 14.2 148 30-214 106-273 (276)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 3.1E-25 1.1E-29 168.4 9.2 97 159-271 39-143 (156)
80 2jab_A H10-2-G3; HER2, darpin, 99.9 6.9E-24 2.4E-28 157.2 14.3 115 101-262 15-136 (136)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-23 3.7E-28 153.4 13.9 116 102-264 4-126 (126)
82 2aja_A Ankyrin repeat family p 99.9 7.3E-26 2.5E-30 195.2 2.2 165 38-267 68-253 (376)
83 2vge_A RELA-associated inhibit 99.9 6.6E-25 2.2E-29 177.2 7.5 164 51-270 1-186 (229)
84 3twr_A Tankyrase-2; ankyrin re 99.9 5.1E-23 1.7E-27 157.4 16.1 125 101-271 9-140 (165)
85 1bi7_B P16INK4A, MTS1, multipl 99.9 2.7E-24 9.3E-29 163.2 8.4 129 69-245 7-150 (156)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 4.9E-23 1.7E-27 152.6 14.9 119 32-188 11-136 (136)
87 1d9s_A Cyclin-dependent kinase 99.9 1.1E-23 3.9E-28 156.0 9.4 120 32-190 9-136 (136)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.8E-22 6E-27 146.9 13.7 118 35-190 2-126 (126)
89 3t8k_A Uncharacterized protein 99.9 6.5E-24 2.2E-28 165.9 5.5 62 34-101 37-108 (186)
90 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.4E-22 2.5E-26 149.4 14.3 123 101-271 3-132 (156)
91 3c5r_A BARD-1, BRCA1-associate 99.9 8.6E-23 2.9E-27 151.4 8.7 127 65-265 2-135 (137)
92 3ui2_A Signal recognition part 99.9 1.1E-21 3.7E-26 159.8 13.1 132 33-187 43-182 (244)
93 2b0o_E UPLC1; arfgap, structur 99.9 2.3E-22 8E-27 168.7 9.2 131 35-203 151-298 (301)
94 1dcq_A PYK2-associated protein 99.9 4.2E-21 1.4E-25 159.3 16.3 127 102-269 132-268 (278)
95 3deo_A Signal recognition part 99.9 1.9E-21 6.3E-26 151.4 13.2 132 33-187 42-181 (183)
96 3ehr_A Osteoclast-stimulating 99.9 5.5E-22 1.9E-26 159.1 8.4 122 101-269 74-203 (222)
97 3lvq_E ARF-GAP with SH3 domain 99.9 6E-21 2.1E-25 170.9 14.0 128 35-200 132-276 (497)
98 3ui2_A Signal recognition part 99.9 1.5E-21 5E-26 159.0 9.0 128 72-264 43-185 (244)
99 3aaa_C Myotrophin, protein V-1 99.8 3.5E-21 1.2E-25 140.0 9.6 103 101-250 8-117 (123)
100 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.3E-20 4.6E-25 130.0 11.3 86 164-264 1-93 (93)
101 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-20 5.3E-25 139.1 12.3 101 156-272 2-109 (137)
102 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-20 4.3E-25 168.8 13.4 127 102-269 134-270 (497)
103 2b0o_E UPLC1; arfgap, structur 99.8 7.9E-21 2.7E-25 159.4 11.0 123 76-251 153-298 (301)
104 3aaa_C Myotrophin, protein V-1 99.8 9.1E-21 3.1E-25 137.8 9.7 89 33-127 5-100 (123)
105 3deo_A Signal recognition part 99.8 3.5E-20 1.2E-24 144.2 12.5 99 160-261 71-181 (183)
106 1dcq_A PYK2-associated protein 99.8 7.9E-20 2.7E-24 151.6 13.4 124 36-191 131-264 (278)
107 3ehr_A Osteoclast-stimulating 99.8 1.4E-20 4.9E-25 150.7 7.9 118 36-191 74-199 (222)
108 3jue_A Arfgap with coiled-coil 99.8 1.1E-19 3.6E-24 156.2 12.9 117 101-264 200-326 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-20 4.5E-25 135.2 6.0 97 160-271 4-107 (115)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.6E-19 5.5E-24 124.6 11.0 86 73-190 1-93 (93)
111 3jue_A Arfgap with coiled-coil 99.8 1.5E-19 5.1E-24 155.3 13.0 117 36-190 200-326 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.7 4.5E-18 1.5E-22 121.9 7.8 91 69-191 4-101 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 8.4E-17 2.9E-21 114.4 9.0 87 157-258 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 2.7E-16 9.4E-21 111.7 9.2 87 66-184 16-109 (110)
115 3mkq_B Coatomer subunit alpha; 92.4 1.2 4E-05 33.5 9.2 133 33-212 6-139 (177)
116 1gp8_A Protein (scaffolding pr 58.6 9.1 0.00031 20.4 2.5 23 35-57 13-35 (40)
117 3zrh_A Ubiquitin thioesterase 52.8 50 0.0017 28.1 7.4 61 200-261 31-91 (454)
118 3zrh_A Ubiquitin thioesterase 37.1 1.1E+02 0.0037 26.1 7.0 56 41-96 28-91 (454)
119 3mkq_A Coatomer beta'-subunit; 31.2 1.4E+02 0.0049 27.1 7.8 124 36-205 656-779 (814)
120 2dkl_A Trinucleotide repeat co 27.1 73 0.0025 20.4 3.6 40 178-219 22-65 (85)
121 2dag_A Ubiquitin carboxyl-term 23.8 83 0.0028 19.5 3.3 42 177-218 9-53 (74)
122 4g26_A Pentatricopeptide repea 22.2 3E+02 0.01 23.8 7.8 78 39-121 33-129 (501)
123 1vek_A UBP14, ubiquitin-specif 21.3 82 0.0028 20.0 3.0 42 177-218 29-73 (84)
124 2crn_A Ubash3A protein; compac 20.5 1.2E+02 0.004 18.1 3.4 40 179-218 11-53 (64)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-36 Score=252.41 Aligned_cols=216 Identities=20% Similarity=0.220 Sum_probs=191.9
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLH 106 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~ 106 (272)
.+.++|++|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|+++|++++ ||||+
T Consensus 38 ~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 111 (285)
T 1wdy_A 38 GGWTPLHNAVQMSREDIVELLLRHG------ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFME 111 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC------CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHH
Confidence 3467899999999999999999997 8999999999999999999999999999999999884 79999
Q ss_pred HHHcCcHHHHHHHHccccccccCCCC----ccccCCcccHHHHHHhcCCCC-------c-cccccCCCCCCCCHHHHHHH
Q psy11714 107 AIKEEYVEAVEILLEWEEKIHVHGQP----YVSENKGRTIFMMLDELKDQP-------E-VFNINCVDPLNRSSLIAAIE 174 (272)
Q Consensus 107 A~~~~~~~~~~~Ll~~g~~~~~~~~~----~~~~~~~~t~l~~~~~~~~~~-------~-~~~~~~~d~~~~t~L~~a~~ 174 (272)
|+..++.+++++|+++|++++..... ...+..|.|||++|+..+... . +.+++.+|..|.||||+|+.
T Consensus 112 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 191 (285)
T 1wdy_A 112 AAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 99999999999999999988732211 011677899999999876532 1 67889999999999999999
Q ss_pred cCC----HHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHh-cCccCCCCCCcchhhhhhcCCCCCCCCCcH
Q psy11714 175 NEN----IELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLE-WEEKIHVHGQPYSWEAVDRSSSTFTPDITP 242 (272)
Q Consensus 175 ~g~----~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 242 (272)
.++ .+++++|+++|+++ .||||+|+..++.+++++|++ .|++++ .++..|.||
T Consensus 192 ~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~---------------~~~~~g~t~ 256 (285)
T 1wdy_A 192 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN---------------DTDSDGKTA 256 (285)
T ss_dssp CSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT---------------CCCTTSCCH
T ss_pred ccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc---------------ccCCCCCcH
Confidence 999 99999999999888 599999999999999999999 899998 788999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy11714 243 LILAAHMNNYEILKILLDRGATLPMPHD 270 (272)
Q Consensus 243 l~~A~~~~~~~iv~~Ll~~ga~~~~~~~ 270 (272)
||+|+..++.+++++|+++||+++.+|.
T Consensus 257 l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 257 LLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9999999999999999999999999885
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.8e-37 Score=254.16 Aligned_cols=218 Identities=14% Similarity=0.092 Sum_probs=179.1
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------h
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFN---INCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------D 102 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~---~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t 102 (272)
..+.++||+|+..|+.+++++|++.+ .+ +|.++..|.||||+|+..|+.+++++|+++|++++ |
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFS------AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHH------TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcC------CCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 45678899999999999999999987 55 88999999999999999999999999999999984 7
Q ss_pred HHHHHHHcCcHHHHHHHHccccccccCCCC-------ccccCCcccHHHHHHhcCCC--------CccccccCCCCCCCC
Q psy11714 103 ALLHAIKEEYVEAVEILLEWEEKIHVHGQP-------YVSENKGRTIFMMLDELKDQ--------PEVFNINCVDPLNRS 167 (272)
Q Consensus 103 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-------~~~~~~~~t~l~~~~~~~~~--------~~~~~~~~~d~~~~t 167 (272)
|||+|+..++.+++++|+++|++....... ......+.++++.+...... ..+.+++.++..|.|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 999999999999999999998876522111 11123344555554443211 124678899999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCc--------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCC
Q psy11714 168 SLIAAIENENIELINILLEYNIQV--------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPD 239 (272)
Q Consensus 168 ~L~~a~~~g~~~~~~~Ll~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g 239 (272)
|||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~---------------~~d~~g 225 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT---------------ARMYGG 225 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc---------------ccccCC
Confidence 999999999999999999999887 499999999999999999999999999 788999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 240 ITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 240 ~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
.||||+|+..++.+++++|+++||+++.++..
T Consensus 226 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 257 (282)
T 1oy3_D 226 RTPLGSALLRPNPILARLLRAHGAPEPEDGGD 257 (282)
T ss_dssp CCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--
T ss_pred CCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCc
Confidence 99999999999999999999999999998864
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.4e-36 Score=257.82 Aligned_cols=208 Identities=20% Similarity=0.255 Sum_probs=147.6
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCChh-----------
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDP-LNRSSLIAAIENENIELINILLEYNIQVK----------- 101 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------- 101 (272)
...+.|+.|+..|++++|+.||+.| +++|.++. .|+||||+|+..|+.++|++|+++|++++
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~G------advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 97 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGG------ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCC------CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhH
Confidence 3567899999999999999999997 99998876 59999999999999999999999998761
Q ss_pred -----------------------------hHHHHHHHcCcHHHHHHHHccccccccCCCC----ccccCCcccHHHHHHh
Q psy11714 102 -----------------------------DALLHAIKEEYVEAVEILLEWEEKIHVHGQP----YVSENKGRTIFMMLDE 148 (272)
Q Consensus 102 -----------------------------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----~~~~~~~~t~l~~~~~ 148 (272)
||||+|+..++.+++++|+++|++++..... ...+..|.||||+|+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 5888888888888888888888877643221 2234567777777766
Q ss_pred cCCCC--------c-------------------------------------cccccCCCCCCCCHHHHHHHcCCHHHHHH
Q psy11714 149 LKDQP--------E-------------------------------------VFNINCVDPLNRSSLIAAIENENIELINI 183 (272)
Q Consensus 149 ~~~~~--------~-------------------------------------~~~~~~~d~~~~t~L~~a~~~g~~~~~~~ 183 (272)
.+... . +++++.+|..|.||||+|+..|+.++++.
T Consensus 178 ~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 178 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 53321 0 34555556666666666666666666666
Q ss_pred HHhC-CCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHH
Q psy11714 184 LLEY-NIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEIL 255 (272)
Q Consensus 184 Ll~~-g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv 255 (272)
|++. |+++ .||||+|+..|+.+++++|+++|++++ ..+|||+|+..++.++|
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n--------------------~~~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD--------------------CGDLVMTARRNYDHSLV 317 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST--------------------TCCHHHHHHHTTCHHHH
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--------------------CCCHHHHHHHcCCHHHH
Confidence 6653 4555 366666666666666666666666655 23577777777777777
Q ss_pred HHHHHCCCCCCC
Q psy11714 256 KILLDRGATLPM 267 (272)
Q Consensus 256 ~~Ll~~ga~~~~ 267 (272)
++|+++||++|.
T Consensus 318 ~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 318 KVLLSHGAKEDF 329 (337)
T ss_dssp HHHHHTTCCC--
T ss_pred HHHHHCcCCCCC
Confidence 777777777665
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.3e-36 Score=257.25 Aligned_cols=210 Identities=17% Similarity=0.154 Sum_probs=151.7
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAI 108 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~ 108 (272)
.++|+.|+..|+.+.++.++... +.+++.+|..|.||||+|+..|+.+++++|+++|++++ ||||+|+
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPL-----NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT-----TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhc-----CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 34466666666666666655543 25555555566666666666666666666666665552 4666666
Q ss_pred HcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc-------ccccc----------------------
Q psy11714 109 KEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNIN---------------------- 159 (272)
Q Consensus 109 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~---------------------- 159 (272)
..|+.+++++|+++|++++ ..+..|.||||+|+..+.... +.+++
T Consensus 100 ~~g~~~iv~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~ 173 (351)
T 3utm_A 100 SYGHYEVTELLLKHGACVN------AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHH
Confidence 6666666666666655555 445555566666555433211 22222
Q ss_pred --------------------------------CCCCCCCCHHHHHHHc---CCHHHHHHHHhCCCCc-------hhHHHH
Q psy11714 160 --------------------------------CVDPLNRSSLIAAIEN---ENIELINILLEYNIQV-------KDALLH 197 (272)
Q Consensus 160 --------------------------------~~d~~~~t~L~~a~~~---g~~~~~~~Ll~~g~~~-------~t~l~~ 197 (272)
..+..|.||||+|+.. +..+++++|++.|+++ .||||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 253 (351)
T 3utm_A 174 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHV 253 (351)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred HhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHH
Confidence 2456788999999998 5689999999999988 499999
Q ss_pred HHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 198 AIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 198 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..
T Consensus 254 A~~~g~~~~v~~Ll~~ga~~n---------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~ 312 (351)
T 3utm_A 254 AAERAHNDVMEVLHKHGAKMN---------------ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ 312 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCHHHHHHHHHCCCCCC---------------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC
Confidence 999999999999999999999 78899999999999999999999999999999998864
No 5
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.7e-37 Score=264.90 Aligned_cols=215 Identities=15% Similarity=0.139 Sum_probs=191.8
Q ss_pred ccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCh-----hhHHH
Q psy11714 31 ALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-----KDALL 105 (272)
Q Consensus 31 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~t~l~ 105 (272)
....+.++||+|+..|+.+++++|++.| +++|.+|..|.||||+|+..|+.+++++|+++|+++ .||||
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~ 89 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETG------VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIH 89 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHH
Confidence 3455678899999999999999999997 999999999999999999999999999999999877 47999
Q ss_pred HHHHcCcHHHHHHHHcc----ccccccC----C-------CCccccCCcccHHHHHHhcC--CCCc-------cccccCC
Q psy11714 106 HAIKEEYVEAVEILLEW----EEKIHVH----G-------QPYVSENKGRTIFMMLDELK--DQPE-------VFNINCV 161 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~----g~~~~~~----~-------~~~~~~~~~~t~l~~~~~~~--~~~~-------~~~~~~~ 161 (272)
+|+..++.+++++|+++ |++++.. . .....+..|.||||+|+..+ .... +++++.+
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc
Confidence 99999999999999998 6555510 0 00126678999999999987 3322 6899999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----c-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhh
Q psy11714 162 DPLNRSSLIAAIENENIELINILLEYNIQ-----V-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAV 229 (272)
Q Consensus 162 d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~-----~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 229 (272)
|..|.||||+|+..|+.+++++|+++|++ + .||||+|+..|+.+++++|+++|++++
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~----------- 238 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVN----------- 238 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT-----------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----------
Confidence 99999999999999999999999999988 5 599999999999999999999999999
Q ss_pred hcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy11714 230 DRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLP 266 (272)
Q Consensus 230 ~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~ 266 (272)
.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 239 ----~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 239 ----MEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp ----CCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred ----CCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 788999999999999999999999999998753
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.8e-37 Score=254.65 Aligned_cols=212 Identities=19% Similarity=0.219 Sum_probs=184.7
Q ss_pred hhccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------
Q psy11714 29 EVALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK------- 101 (272)
Q Consensus 29 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 101 (272)
......+.++|++|+..|+.++++.|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~ 126 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQG------WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWH 126 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTT------CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCC
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCC------CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 344455678899999999999999999997 9999999999999999999999999999999999884
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCC-------ccccccCCCCCCCCHHHHHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQP-------EVFNINCVDPLNRSSLIAAIE 174 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~ 174 (272)
||||+|+..++.+++++|+++|++++ .+..|.||||+|+..+... .+.+++.+|..|.||||+|+.
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 199 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHGASVQ-------PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACE 199 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSS-------CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHH
T ss_pred CHHHHHHHcCHHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 79999999999999999999998876 2445999999999876532 268899999999999999999
Q ss_pred cCCHHHHHHHHhCCCCc------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHH
Q psy11714 175 NENIELINILLEYNIQV------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAH 248 (272)
Q Consensus 175 ~g~~~~~~~Ll~~g~~~------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~ 248 (272)
.|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++ .+|..|.||||+|+
T Consensus 200 ~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~---------------~~d~~g~t~l~~A~- 263 (285)
T 3d9h_A 200 NQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQ---------------AKNAEGKRPVELVP- 263 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCGGGGSC-
T ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---------------CcCCCCCCHHHHhc-
Confidence 99999999999999988 599999999999999999999999999 78999999999999
Q ss_pred cCCHHHHHHHHHC-CCCCCCCCC
Q psy11714 249 MNNYEILKILLDR-GATLPMPHD 270 (272)
Q Consensus 249 ~~~~~iv~~Ll~~-ga~~~~~~~ 270 (272)
++.+++++|+++ |++++.|.+
T Consensus 264 -~~~~~~~~Ll~~~~a~l~~~~P 285 (285)
T 3d9h_A 264 -PESPLAQLFLEREGASLPKPKP 285 (285)
T ss_dssp -TTSHHHHHHHHHC---------
T ss_pred -CccHHHHHHHHhhccCCCCCCC
Confidence 456999999999 999888754
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-35 Score=245.68 Aligned_cols=211 Identities=19% Similarity=0.258 Sum_probs=192.5
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCV-DPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
++.++|+.|+..|+.+.+++|++.+ .+++.. +..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGG------ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcC------CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 4567899999999999999999997 888888 7789999999999999999999999999884 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc-------cccccCC----------CCCCCCH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNINCV----------DPLNRSS 168 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~~~----------d~~~~t~ 168 (272)
+|+..|+.+++++|+++|++++ ..+..|.|||++|+..+.... +.+++.. +..|.||
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~ 151 (285)
T 1wdy_A 78 LAAIAGSVKLLKLFLSKGADVN------ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTT------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCC------ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcH
Confidence 9999999999999999999988 678899999999998765422 5666665 7889999
Q ss_pred HHHHHHcCCHHHHHHHHhC-CCCc-------hhHHHHHHHcCC----HHHHHHHHhcCccCCCCCCcchhhhhhcCCCCC
Q psy11714 169 LIAAIENENIELINILLEY-NIQV-------KDALLHAIKEEY----VEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTF 236 (272)
Q Consensus 169 L~~a~~~g~~~~~~~Ll~~-g~~~-------~t~l~~A~~~~~----~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (272)
||+|+..|+.+++++|++. |+++ .||||+|+..++ .+++++|+++|++++ .++
T Consensus 152 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~---------------~~~ 216 (285)
T 1wdy_A 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---------------VRG 216 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---------------CCC
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC---------------CcC
Confidence 9999999999999999987 8887 599999999999 999999999999999 788
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCC
Q psy11714 237 TPDITPLILAAHMNNYEILKILLD-RGATLPMPHDV 271 (272)
Q Consensus 237 ~~g~t~l~~A~~~~~~~iv~~Ll~-~ga~~~~~~~~ 271 (272)
..|.||||+|+..++.+++++|++ +|++++..+..
T Consensus 217 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~ 252 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 252 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCC
Confidence 899999999999999999999999 89999998754
No 8
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.4e-36 Score=245.51 Aligned_cols=205 Identities=19% Similarity=0.180 Sum_probs=186.3
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHA 107 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A 107 (272)
...+|+.|+..|+.+.+++++..+ ...++..+..|.||||+|+..|+.+++++|+++|++++ ||||+|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 80 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILAD-----KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIA 80 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHC-----GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhc-----hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHH
Confidence 345699999999999999999987 36678889999999999999999999999999999884 799999
Q ss_pred HHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCC-------ccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 108 IKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQP-------EVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 108 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
+..++.+++++|+++|++++ ..+..|.||||+|+..+... .+.+++.++..|.||||+|+..|+.++
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 154 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVN------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKM 154 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHcCHHHHHHHHHHcCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 99999999999999999988 67788999999999876532 267888999999999999999999999
Q ss_pred HHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 181 INILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 181 ~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.|||++|+..++.+
T Consensus 155 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 155 VHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY---------------IENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp HHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC---------------CCCTTSCCHHHHSCHHHHHH
T ss_pred HHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC---------------CCCCCCCCHHHHHHhhHHHH
Confidence 99999999888 599999999999999999999999998 78889999999999999999
Q ss_pred HHHHHHHCCCCC
Q psy11714 254 ILKILLDRGATL 265 (272)
Q Consensus 254 iv~~Ll~~ga~~ 265 (272)
++++|+++|+++
T Consensus 220 i~~lL~~~~a~i 231 (231)
T 3aji_A 220 LKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHccccccC
Confidence 999999999874
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.8e-36 Score=246.69 Aligned_cols=209 Identities=18% Similarity=0.177 Sum_probs=158.8
Q ss_pred cChhhhHHHHHHHcC-------------CHHHHHHHHHccCCCCCCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy11714 32 LTPQEKRFLLVAERG-------------DCATVRKMLDELKDQPEVFNINC-VDPLNRSSLIAAIENENIELINILLEYN 97 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g-------------~~~~~~~ll~~~~~~~~~~~~n~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 97 (272)
...+.++||.|+..| +.++++.|++.| .+++. .|..|.||||+|+..|+.+++++|+++|
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 80 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQG------ASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS 80 (253)
T ss_dssp ---------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHcc------CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 345678899999977 899999999998 66654 5889999999999999999999999999
Q ss_pred CChh-------hHHHHHHHcCcHHHHHHHHcccc-ccccCCCCccccCCcccHHHHHHhcCCCCc-------cccccCCC
Q psy11714 98 IQVK-------DALLHAIKEEYVEAVEILLEWEE-KIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNINCVD 162 (272)
Q Consensus 98 ~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~~~d 162 (272)
++++ ||||+|+..++.+++++|+++|+ +++ ..+..|.||||+|+..+.... +.+++.+|
T Consensus 81 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 154 (253)
T 1yyh_A 81 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 154 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC
Confidence 9984 89999999999999999999887 666 677899999999998866433 68899999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCC
Q psy11714 163 PLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSST 235 (272)
Q Consensus 163 ~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 235 (272)
..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++ .+
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---------------~~ 219 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD---------------IT 219 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------CC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc---------------cc
Confidence 99999999999999999999999999998 599999999999999999999999999 78
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy11714 236 FTPDITPLILAAHMNNYEILKILLDRGATLPM 267 (272)
Q Consensus 236 ~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~ 267 (272)
|..|.||+++|+.+|+.+++++|.+..-.+..
T Consensus 220 d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~~~ 251 (253)
T 1yyh_A 220 DHMDRLPRDIAQERMHHDIVRLLDLEHHHHHH 251 (253)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHC-------
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhhhccc
Confidence 89999999999999999999999987655443
No 10
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-35 Score=261.97 Aligned_cols=208 Identities=18% Similarity=0.223 Sum_probs=125.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHH
Q psy11714 37 KRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIK 109 (272)
Q Consensus 37 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~ 109 (272)
++|+.|+..|+.+++++|++.+ ++++..+..|.||||+|+..|+.+++++|+++|++++ ||||+|+.
T Consensus 148 t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 221 (437)
T 1n11_A 148 TPLHVAAKYGKVRVAELLLERD------AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAK 221 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT------CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH
Confidence 3444444444444444444443 4444444444444444444444444444444444431 34555555
Q ss_pred cCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCC-------CccccccCCCCCCCCHHHHHHHcCCHHHHH
Q psy11714 110 EEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQ-------PEVFNINCVDPLNRSSLIAAIENENIELIN 182 (272)
Q Consensus 110 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~-------~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~ 182 (272)
.++.+++++|+++|++++ ..+..|.||||+|+..+.. ..+.+++..+..|.||||+|+..|+.++++
T Consensus 222 ~~~~~~~~~Ll~~g~~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 295 (437)
T 1n11_A 222 QNQVEVARSLLQYGGSAN------AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVAD 295 (437)
T ss_dssp TTCHHHHHHHHHTTCCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCC------CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 555555555555444444 3445555666665554332 124555556666666666666666666666
Q ss_pred HHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHH
Q psy11714 183 ILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEIL 255 (272)
Q Consensus 183 ~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv 255 (272)
+|+++|+++ .||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.++|
T Consensus 296 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n---------------~~~~~g~t~L~~A~~~g~~~iv 360 (437)
T 1n11_A 296 VLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN---------------AKTKLGYSPLHQAAQQGHTDIV 360 (437)
T ss_dssp HHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC---------------CCCCCCCCHHHHHHHCChHHHH
Confidence 666666555 366666666666666666666666666 7788999999999999999999
Q ss_pred HHHHHCCCCCCCCCCC
Q psy11714 256 KILLDRGATLPMPHDV 271 (272)
Q Consensus 256 ~~Ll~~ga~~~~~~~~ 271 (272)
++|+++||+++..+..
T Consensus 361 ~~Ll~~ga~~~~~~~~ 376 (437)
T 1n11_A 361 TLLLKNGASPNEVSSD 376 (437)
T ss_dssp HHHHHTTCCSCCCCSS
T ss_pred HHHHHCcCCCCCCCCC
Confidence 9999999999988754
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=247.19 Aligned_cols=202 Identities=17% Similarity=0.183 Sum_probs=176.6
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHA 107 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A 107 (272)
+.++||.|+..|+.+++++|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++ ||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQG------WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 76 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT------CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 356799999999999999999997 9999999999999999999999999999999999984 799999
Q ss_pred HHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCC-------ccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 108 IKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQP-------EVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 108 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
+..++.+++++|+++|++++ .+..|.||||+|+..+... .+.+++.+|..|.||||+|+..|+.++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQ-------PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 149 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSS-------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHH
Confidence 99999999999999998876 3445889999988876532 267888888899999999999999999
Q ss_pred HHHHHhCCCCc------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHH
Q psy11714 181 INILLEYNIQV------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEI 254 (272)
Q Consensus 181 ~~~Ll~~g~~~------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i 254 (272)
+++|+++|+++ .||||+|+..++.+++++|+++|++++ .+|..|.||||+|+..+ ++
T Consensus 150 v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~---------------~~d~~g~tpl~~A~~~~--~~ 212 (261)
T 2xai_A 150 VKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQ---------------AKNAEGKRPVELVPPES--PL 212 (261)
T ss_dssp HHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTSCCGGGGSCTTC--TH
T ss_pred HHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCChhhhccccc--cH
Confidence 99999988887 589999999999999999999999888 77888999999998655 58
Q ss_pred HHHHHHCCCCCC
Q psy11714 255 LKILLDRGATLP 266 (272)
Q Consensus 255 v~~Ll~~ga~~~ 266 (272)
+++|+++++.+.
T Consensus 213 ~~~ll~~~~~~~ 224 (261)
T 2xai_A 213 AQLFLEREGPPS 224 (261)
T ss_dssp HHHHHHC-CCCC
T ss_pred HHHHHhccCCcc
Confidence 899998887653
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=246.46 Aligned_cols=217 Identities=14% Similarity=0.045 Sum_probs=167.1
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCC-----CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh------
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQP-----EVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK------ 101 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~-----~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------ 101 (272)
....+.||+|+..|+.+.+..++..++... ....++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g 92 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH 92 (285)
T ss_dssp -----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 456778999999999988888776643210 013467788999999999999999999999999999884
Q ss_pred -hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc-------cccccCCCCCCCCHHHHHH
Q psy11714 102 -DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNINCVDPLNRSSLIAAI 173 (272)
Q Consensus 102 -t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~~~d~~~~t~L~~a~ 173 (272)
||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..+.... +.+++.. ..|.||||+|+
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~ 165 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGAQVN------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAA 165 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSS------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHHHHHH
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCCC------CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHHHHHH
Confidence 89999999999999999999999988 678899999999998765322 4566544 45999999999
Q ss_pred HcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHH
Q psy11714 174 ENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILA 246 (272)
Q Consensus 174 ~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A 246 (272)
..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++ . +..|.||||+|
T Consensus 166 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~-~~~g~t~L~~A 229 (285)
T 3d9h_A 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN---------------Q-GKGQDSPLHAV 229 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT---------------C-CBTTBCHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC---------------C-CCCCCCHHHHH
Confidence 999999999999999988 499999999999999999999999987 3 67899999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy11714 247 AHMNNYEILKILLDRGATLPMPHDVR 272 (272)
Q Consensus 247 ~~~~~~~iv~~Ll~~ga~~~~~~~~~ 272 (272)
+..++.+++++|+++|++++.+|..+
T Consensus 230 ~~~~~~~~v~~Ll~~gad~~~~d~~g 255 (285)
T 3d9h_A 230 VRTASEELACLLMDFGADTQAKNAEG 255 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 99999999999999999999988653
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.6e-35 Score=236.52 Aligned_cols=191 Identities=15% Similarity=0.217 Sum_probs=133.5
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHc---cCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDE---LKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK------- 101 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~---~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 101 (272)
...+.++||+|+..|+.+++++|++. . +.+++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 80 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQG-----GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ 80 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 35567889999999999999999972 2 38999999999999999999999999999999999984
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELI 181 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~ 181 (272)
||||+|+..++.+++++|+++++... .+++..+..|.||||+|+..|+.+++
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~----------------------------~~~~~~~~~g~t~L~~A~~~~~~~~~ 132 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGT----------------------------LDLEARNYDGLTALHVAVNTECQETV 132 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTS----------------------------CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcc----------------------------ccccccCcCCCcHHHHHHHcCCHHHH
Confidence 79999999999999999999876321 23344445555555555555555555
Q ss_pred HHHHhCCCCc--------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 182 NILLEYNIQV--------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 182 ~~Ll~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.||||+|+..++.+
T Consensus 133 ~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~L~~A~~~~~~~ 197 (241)
T 1k1a_A 133 QLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN---------------AQMYSGSSALHSASGRGLLP 197 (241)
T ss_dssp HHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CBCTTSCBHHHHHHHHTCHH
T ss_pred HHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHHHHcCCHH
Confidence 5555555444 255555555555555555555555555 44445555555555555555
Q ss_pred HHHHHHHCCCCCCCCCC
Q psy11714 254 ILKILLDRGATLPMPHD 270 (272)
Q Consensus 254 iv~~Ll~~ga~~~~~~~ 270 (272)
++++|+++|++++.+|.
T Consensus 198 ~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 198 LVRTLVRSGADSSLKNC 214 (241)
T ss_dssp HHHHHHHTTCCTTCCCT
T ss_pred HHHHHHhcCCCCCCcCC
Confidence 55555555555555443
No 14
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.8e-35 Score=258.12 Aligned_cols=227 Identities=19% Similarity=0.211 Sum_probs=184.1
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
..+.++|+.|+..|+.+++++|++.| +++|..+..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRG------ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTT------CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 34567799999999999999999987 8889999999999999999999999999999998873 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc-------cccccCCCCCCCCHHHHHHHcCCH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNINCVDPLNRSSLIAAIENENI 178 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~~~d~~~~t~L~~a~~~g~~ 178 (272)
+|+..|+.+++++|+++|++++ ..+..|.||||+|+..+.... +.+.+..+..|.||||+|+..|+.
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~ 159 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPN------LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKV 159 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTT------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHCCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCH
Confidence 9999999999999999998887 667788888888887765422 456677778888888888888888
Q ss_pred HHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCC----CCcchhhhhh--------------cCC
Q psy11714 179 ELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVH----GQPYSWEAVD--------------RSS 233 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~----~~~~~~~~~~--------------~~~ 233 (272)
+++++|+++|+++ .||||+|+..++.+++++|+++|++++.. .+++++++.. ..+
T Consensus 160 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 239 (437)
T 1n11_A 160 RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN 239 (437)
T ss_dssp HHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8888888888776 47888888888888888888888877642 3455554421 124
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 234 STFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 234 ~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 277 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKS 277 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCC
Confidence 56778899999999999999999999999999887754
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-34 Score=234.74 Aligned_cols=175 Identities=21% Similarity=0.248 Sum_probs=121.6
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHH
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DAL 104 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l 104 (272)
...+.++|+.|+..|+.+++++|++.| ++++..+..|.||||+|+..|+.+++++|+++|++++ |||
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAG------ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcC------CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 345678899999999999999999997 9999999999999999999999999999999998873 799
Q ss_pred HHHHHcCcHHHHHHHHccc-cccccCCCCccccCCcccHHHHHHhcCCCC-------ccccccCCCCCCCCHHHHHHHcC
Q psy11714 105 LHAIKEEYVEAVEILLEWE-EKIHVHGQPYVSENKGRTIFMMLDELKDQP-------EVFNINCVDPLNRSSLIAAIENE 176 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~~g 176 (272)
|+|+..++.+++++|+++| ++++ ..+..|.|||++|+..+... .+.+++.++..|.||||+|+..|
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVN------CQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcc------cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence 9999999999999999987 4544 33444445555544433211 13444444444555555555555
Q ss_pred CHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCC
Q psy11714 177 NIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIH 218 (272)
Q Consensus 177 ~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 218 (272)
+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 555555555544444 245555555555555555555554444
No 16
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.1e-34 Score=247.46 Aligned_cols=185 Identities=19% Similarity=0.217 Sum_probs=156.0
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCC---------------------------CCCCCcccCCCCCCcHHHHHHHcCCH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQ---------------------------PEVFNINCVDPLNRSSLIAAIENENI 87 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~---------------------------~~~~~~n~~~~~g~t~L~~A~~~~~~ 87 (272)
+.++||+|+..|+.++++.||+.|-.- ..+.+++..|..|.||||+|+..|+.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 457899999999999999999986110 00134667788899999999999999
Q ss_pred HHHHHHHHCCCChh-----------------hHHHHHHHcCcHHHHHHHHc-cccccccCC-------------------
Q psy11714 88 ELINILLEYNIQVK-----------------DALLHAIKEEYVEAVEILLE-WEEKIHVHG------------------- 130 (272)
Q Consensus 88 ~~v~~Ll~~g~~~~-----------------t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~------------------- 130 (272)
+++++|+++|++++ ||||+|+..|+.+++++|++ .|++++...
T Consensus 139 ~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~ 218 (337)
T 4g8k_A 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 218 (337)
T ss_dssp HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTH
T ss_pred HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccH
Confidence 99999999998873 79999999999999999995 588887421
Q ss_pred -----------C-CccccCCcccHHHHHHhcCCCC--------ccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Q psy11714 131 -----------Q-PYVSENKGRTIFMMLDELKDQP--------EVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQ 190 (272)
Q Consensus 131 -----------~-~~~~~~~~~t~l~~~~~~~~~~--------~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~ 190 (272)
. ...++..|.||||+++..+... .+.+++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 219 ~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 219 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 1 1234567899999999876532 2678999999999999999999999999999999999
Q ss_pred c--hhHHHHHHHcCCHHHHHHHHhcCccCCC
Q psy11714 191 V--KDALLHAIKEEYVEAVEILLEWEEKIHV 219 (272)
Q Consensus 191 ~--~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 219 (272)
+ .+||++|+..++.+++++|+++||++|.
T Consensus 299 ~n~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 299 TDCGDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp STTCCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 8 5899999999999999999999999984
No 17
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.2e-35 Score=248.12 Aligned_cols=198 Identities=17% Similarity=0.169 Sum_probs=158.0
Q ss_pred cCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-----hHHHHHHHcCcHHHHHHH
Q psy11714 45 RGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-----DALLHAIKEEYVEAVEIL 119 (272)
Q Consensus 45 ~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----t~l~~A~~~~~~~~~~~L 119 (272)
..+.+.+..+|..+ ++|.+|..|.||||+|+..|+.+++++|+++|++++ ||||+|+..|+.+++++|
T Consensus 9 ~~~~~~v~~lL~~~-------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 9 TWKSKQLKSFLSSK-------DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp GCCHHHHHHHHHST-------TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHH
T ss_pred hcCHHHHHHHHHhC-------CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 44555555666553 356667777777777777777777777777776663 577777777777777777
Q ss_pred HccccccccCCCCccccCCcccHHHHHHhcCCCCc-------cccccCCCCCC-CCHHHHHHHcCCHHHHHHHHhCCCCc
Q psy11714 120 LEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNINCVDPLN-RSSLIAAIENENIELINILLEYNIQV 191 (272)
Q Consensus 120 l~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~~~d~~~-~t~L~~a~~~g~~~~~~~Ll~~g~~~ 191 (272)
+++|++++ .++..|.||||+|+..+.... +++++.++..| .||||+|+..|+.+++++|+++|++.
T Consensus 82 l~~ga~~~------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 82 LFSGLDDS------QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHCCCCCC------CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 77777766 456667777777776654321 57778888889 89999999999999999999999877
Q ss_pred ------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHCCCC
Q psy11714 192 ------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITP-LILAAHMNNYEILKILLDRGAT 264 (272)
Q Consensus 192 ------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~-l~~A~~~~~~~iv~~Ll~~ga~ 264 (272)
.||||+|+..|+.+++++|+++|++++ .++..|.|| ||+|+..++.+++++|+++||+
T Consensus 156 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n---------------~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 156 FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN---------------TNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC---------------TTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred ccccCCccHHHHHHHcChHHHHHHHHHcCCCCC---------------cccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 599999999999999999999999999 788899998 9999999999999999999999
Q ss_pred CCCCCC
Q psy11714 265 LPMPHD 270 (272)
Q Consensus 265 ~~~~~~ 270 (272)
++.++.
T Consensus 221 ~~~~~~ 226 (285)
T 3kea_A 221 IYSANL 226 (285)
T ss_dssp STTTTG
T ss_pred CCCCCh
Confidence 998863
No 18
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.4e-35 Score=236.39 Aligned_cols=209 Identities=16% Similarity=0.204 Sum_probs=187.0
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh--------hHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK--------DAL 104 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--------t~l 104 (272)
....++|+.|+..|+.+.+++|++.| ++++.++..|.||||+|+..|+.+++++|+++|.+++ |||
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAG------YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcC------CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 34456699999999999999999997 9999999999999999999999999999999998773 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCC-------ccccccCCCCCCCCHHHHHHHcCC
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQP-------EVFNINCVDPLNRSSLIAAIENEN 177 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~~g~ 177 (272)
|+|+..++.+++++|+++|++++ ..+..|.|||++|+..+... .+.+++..+..|.||||+|+..+.
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADPS------LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCc------ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence 99999999999999999999988 67889999999999876532 267899999999999999997766
Q ss_pred -HHHHHHHHhCCCCc--------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHH
Q psy11714 178 -IELINILLEYNIQV--------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAH 248 (272)
Q Consensus 178 -~~~~~~Ll~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~ 248 (272)
.+++++|++.|+++ .||||+|+..++.+++++|+++|++++ .++..|.|||++|+.
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD---------------AQNIKGESALDLAKQ 219 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT---------------CBCTTSCBHHHHHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHHHH
Confidence 89999999999888 389999999999999999999999998 788999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC
Q psy11714 249 MNNYEILKILLDRGATLPMP 268 (272)
Q Consensus 249 ~~~~~iv~~Ll~~ga~~~~~ 268 (272)
.++.+++++|+++|++....
T Consensus 220 ~~~~~~v~~L~~~~~~~~~~ 239 (240)
T 3eu9_A 220 RKNVWMINHLQEARQAKGYD 239 (240)
T ss_dssp TTCHHHHHHHHHHC------
T ss_pred cCcHHHHHHHHHhhhccCcC
Confidence 99999999999999987543
No 19
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.1e-35 Score=252.73 Aligned_cols=206 Identities=16% Similarity=0.182 Sum_probs=182.6
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHH--------HccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh---
Q psy11714 33 TPQEKRFLLVAERGDCATVRKML--------DELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK--- 101 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll--------~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--- 101 (272)
..+.++||+|+..|+.++++.|+ +.| +++|.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~g------a~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~ 196 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG------ADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN 196 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcC------CCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC
Confidence 34678899999999998887776 565 9999999999999999999999999999999999884
Q ss_pred ----hHHHHHHHcCcHHHHHHHHccc---cccccCCCCccccCCcccHHHHHHhcCCCC----------ccccccC----
Q psy11714 102 ----DALLHAIKEEYVEAVEILLEWE---EKIHVHGQPYVSENKGRTIFMMLDELKDQP----------EVFNINC---- 160 (272)
Q Consensus 102 ----t~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~----------~~~~~~~---- 160 (272)
||||+|+..|+.+++++|++++ ++++ ..+..|.||||+|+..+... .+.+++.
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 270 (373)
T 2fo1_E 197 KSERSALHQAAANRDFGMMVYMLNSTKLKGDIE------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270 (373)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCccccChh------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc
Confidence 7999999999999999999998 6777 67889999999999875311 1455554
Q ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhh
Q psy11714 161 ----VDPLNRSSLIAAIENENIELINILLEYN-IQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEA 228 (272)
Q Consensus 161 ----~d~~~~t~L~~a~~~g~~~~~~~Ll~~g-~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 228 (272)
.|..|.||||+|+..|+.+++++|+++| +++ .||||+|+..|+.+++++|+++|++++
T Consensus 271 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~---------- 340 (373)
T 2fo1_E 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE---------- 340 (373)
T ss_dssp GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS----------
T ss_pred ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------
Confidence 6779999999999999999999999875 777 599999999999999999999999999
Q ss_pred hhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy11714 229 VDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATL 265 (272)
Q Consensus 229 ~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~ 265 (272)
.+|..|.||||+|+.+|+.+++++|+++|++.
T Consensus 341 -----~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 341 -----AVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp -----CCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred -----CCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 78899999999999999999999999999863
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.5e-34 Score=228.87 Aligned_cols=186 Identities=17% Similarity=0.136 Sum_probs=161.9
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCh--------hhHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYN--IQV--------KDALL 105 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--------~t~l~ 105 (272)
.++|+.|+..|+.+.++.|++.+ ....+..|..|.||||+|+..|+.+++++|+++| .++ .||||
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSK-----PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHC-----GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcC-----ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHH
Confidence 45799999999999999999998 2444558899999999999999999999999999 444 37999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILL 185 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll 185 (272)
+|+..++.+++++|+++|+. .+++..+..|.||||+|+..|+.+++++|+
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~------------------------------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 127 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLK------------------------------PDLNKITNQGVTCLHLAVGKKWFEVSQFLI 127 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSC------------------------------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCC------------------------------cccccCCcCCCCHHHHHHHcCCHhHHHHHH
Confidence 99999999999999998733 235567788899999999999999999999
Q ss_pred hCCCCc-------hhHHHHHHHcCCHHHHHHHHhcC-ccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy11714 186 EYNIQV-------KDALLHAIKEEYVEAVEILLEWE-EKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKI 257 (272)
Q Consensus 186 ~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~ 257 (272)
++|+++ .||||+|+..++.+++++|+++| ++++ .++..|.||||+|+..++.+++++
T Consensus 128 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------------~~d~~g~t~L~~A~~~~~~~~v~~ 192 (228)
T 2dzn_A 128 ENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN---------------WQDKQGWTPLFHALAEGHGDAAVL 192 (228)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC---------------CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc---------------CcCCCCCCHHHHHHHcCCHHHHHH
Confidence 998887 48999999999999999999988 8887 678889999999999999999999
Q ss_pred HH-HCCCCCCCCCCC
Q psy11714 258 LL-DRGATLPMPHDV 271 (272)
Q Consensus 258 Ll-~~ga~~~~~~~~ 271 (272)
|+ ++|++++.+|..
T Consensus 193 Ll~~~ga~~~~~~~~ 207 (228)
T 2dzn_A 193 LVEKYGAEYDLVDNK 207 (228)
T ss_dssp HHHHHCCCSCCBCTT
T ss_pred HHHhcCCCCCccCCC
Confidence 99 889999888754
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5.4e-35 Score=239.83 Aligned_cols=186 Identities=23% Similarity=0.219 Sum_probs=139.0
Q ss_pred CcccCCCCCCcHHHHHHHcC-------------CHHHHHHHHHCCCCh--------hhHHHHHHHcCcHHHHHHHHcccc
Q psy11714 66 NINCVDPLNRSSLIAAIENE-------------NIELINILLEYNIQV--------KDALLHAIKEEYVEAVEILLEWEE 124 (272)
Q Consensus 66 ~~n~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~ 124 (272)
++|.+|..|.||||+|+..| +.+++++|+++|+++ .||||+|+..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 67889999999999999977 899999999999887 379999999999999999999999
Q ss_pred ccccCCCCccccCCcccHHHHHHhcCCCCc-------c-ccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-----
Q psy11714 125 KIHVHGQPYVSENKGRTIFMMLDELKDQPE-------V-FNINCVDPLNRSSLIAAIENENIELINILLEYNIQV----- 191 (272)
Q Consensus 125 ~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~-~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~----- 191 (272)
+++ .++..|.||||+|+..+.... + .+++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 82 ~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 155 (253)
T 1yyh_A 82 DAN------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 155 (253)
T ss_dssp CTT------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT
T ss_pred CCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC
Confidence 998 678899999999998765322 3 378899999999999999999999999999999988
Q ss_pred --hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q psy11714 192 --KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPH 269 (272)
Q Consensus 192 --~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~ 269 (272)
.||||+|+..++.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNGANKD---------------MQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc
Confidence 599999999999999999999999999 788899999999999999999999999999999988
Q ss_pred CCC
Q psy11714 270 DVR 272 (272)
Q Consensus 270 ~~~ 272 (272)
.++
T Consensus 221 ~~g 223 (253)
T 1yyh_A 221 HMD 223 (253)
T ss_dssp TTC
T ss_pred cCC
Confidence 653
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.3e-33 Score=226.92 Aligned_cols=183 Identities=21% Similarity=0.250 Sum_probs=167.4
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-Ch-------hhHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNI-QV-------KDAL 104 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~-------~t~l 104 (272)
....++|++|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|+++|. ++ .|||
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 96 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEAS------ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 96 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHH
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHH
Confidence 45677899999999999999999997 8999999999999999999999999999999886 44 3799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
|+|+..++.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|
T Consensus 97 ~~A~~~~~~~~~~~Ll~~g~~~--------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~L 144 (223)
T 2f8y_A 97 ILAARLAVEGMLEDLINSHADV--------------------------------NAVDDLGKSALHWAAAVNNVDAAVVL 144 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT--------------------------------TCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHcCCCC--------------------------------cCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 9999999999999999987554 46788899999999999999999999
Q ss_pred HhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy11714 185 LEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKI 257 (272)
Q Consensus 185 l~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~ 257 (272)
+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.|||++|+..++.+++++
T Consensus 145 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~~~~i~~~ 209 (223)
T 2f8y_A 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD---------------ITDHMDRLPRDIAQERMHHDIVRL 209 (223)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc---------------cccccCCCHHHHHHHhcchHHHHH
Confidence 9999988 599999999999999999999999998 788899999999999999999999
Q ss_pred HHHCCCCCCCC
Q psy11714 258 LLDRGATLPMP 268 (272)
Q Consensus 258 Ll~~ga~~~~~ 268 (272)
|+++|+....+
T Consensus 210 L~~~g~~~~~~ 220 (223)
T 2f8y_A 210 LDEYNLVRSPQ 220 (223)
T ss_dssp HHHTTCSSCC-
T ss_pred HHHcCCCcccc
Confidence 99999976543
No 23
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4e-34 Score=231.31 Aligned_cols=202 Identities=19% Similarity=0.238 Sum_probs=171.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCh------------hh
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV------------KD 102 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~t 102 (272)
+.++||.|+..|+.+.++.|++.. ++++|.+|..|.||||+|+..|+.+++++|+++|+++ .|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t 77 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFE-----GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQT 77 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTT-----CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhc-----CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcC
Confidence 356799999999999999999983 2999999999999999999999999999999999875 37
Q ss_pred HHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHH
Q psy11714 103 ALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELIN 182 (272)
Q Consensus 103 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~ 182 (272)
|||+|+..++.+++++|+++|++++.. +... .+ ....+..|..|.||||+|+..|+.++++
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~--~~-----------~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 138 (232)
T 2rfa_A 78 ALHIAVINQNVNLVRALLARGASVSAR------ATGS--VF-----------HYRPHNLIYYGEHPLSFAACVGSEEIVR 138 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC------CCSG--GG-----------SCCTTCSCCCCSSHHHHHHHHTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcc------cCCc--ce-----------eecccccccCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999999988732 1111 00 1235567789999999999999999999
Q ss_pred HHHhCCCCc-------hhHHHHHHHcCCHHHH----HHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC
Q psy11714 183 ILLEYNIQV-------KDALLHAIKEEYVEAV----EILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN 251 (272)
Q Consensus 183 ~Ll~~g~~~-------~t~l~~A~~~~~~~~~----~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 251 (272)
+|+++|+++ .||||+|+..++.+++ ++|+++|++.+. ....+.++..|.||||+|+..|+
T Consensus 139 ~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~---------~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 139 LLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHL---------KSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSS---------CCGGGCCCTTSCCHHHHHHHHTC
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhh---------hhhhccCCCCCCCHHHHHHHcCC
Confidence 999999998 5999999999999988 999999998741 11112678899999999999999
Q ss_pred HHHHHHHHHCCCCCCCCC
Q psy11714 252 YEILKILLDRGATLPMPH 269 (272)
Q Consensus 252 ~~iv~~Ll~~ga~~~~~~ 269 (272)
.+++++|+++|+....+.
T Consensus 210 ~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 210 IVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhcCccchhhh
Confidence 999999999998876654
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-33 Score=236.75 Aligned_cols=200 Identities=19% Similarity=0.184 Sum_probs=155.5
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLH 106 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~ 106 (272)
...++|+.|+..|+.+.+++|++.| +++|..|..|.||||+|+..|+.+++++|+++|++++ ||||+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERG------ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHA 112 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHC------CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcC------CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 4567899999999999999999997 9999999999999999999999999999999999984 79999
Q ss_pred HHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc--------c-----------------------
Q psy11714 107 AIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE--------V----------------------- 155 (272)
Q Consensus 107 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~--------~----------------------- 155 (272)
|+..|+.+++++|+++|++++ ..+..|.|||++|+..+.... +
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVG------AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLN 186 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCC------CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHh
Confidence 999999999999999998887 566777788877654321100 0
Q ss_pred ---ccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcch
Q psy11714 156 ---FNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYS 225 (272)
Q Consensus 156 ---~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 225 (272)
......+..|.||||+|+..|+.+++++|+++|+++ .||||+|+..|+.+++++|+++|++++
T Consensus 187 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~------- 259 (299)
T 1s70_B 187 SGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME------- 259 (299)
T ss_dssp HTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred ccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC-------
Confidence 112234556777777777777777777777777776 377777777777777777777777777
Q ss_pred hhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy11714 226 WEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDR 261 (272)
Q Consensus 226 ~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ 261 (272)
.+|..|.||||+|+... .++++.|++.
T Consensus 260 --------~~d~~g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 260 --------AVNKVGQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp --------CCCTTSCCTTTSCCSGG-GHHHHHHHHH
T ss_pred --------CcCCCCCCHHHHHHHHH-HHHHHHHHHH
Confidence 66777777777776543 4444444443
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=236.54 Aligned_cols=212 Identities=18% Similarity=0.163 Sum_probs=148.6
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCC--CCCCcccCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCChh-------hH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQP--EVFNINCVDPLNRSSLIAAIENENI-ELINILLEYNIQVK-------DA 103 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~--~~~~~n~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~-------t~ 103 (272)
...++|+.|+..|+.++|++||+.+.... ....++..+..|.|||+.|+..++. .++++|++.|++++ ||
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~Tp 89 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSP 89 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCH
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 34577999999999999999999873110 0123567788899999999987764 58899999999984 79
Q ss_pred HHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCC-------ccccccCCCCCCCCHHHHHHHcC
Q psy11714 104 LLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQP-------EVFNINCVDPLNRSSLIAAIENE 176 (272)
Q Consensus 104 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~~g 176 (272)
||+|+..|+.+++++|+++|++++ .++..|.||++.++...... .+++++.+|..|.||||+|+..|
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAG------ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTT------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcC------ccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 999999999999999999999988 67888999999998876532 26889999999999999999999
Q ss_pred CHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHc
Q psy11714 177 NIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHM 249 (272)
Q Consensus 177 ~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~ 249 (272)
+.+++++|+++|+++ .||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+++
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~---------------~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ---------------VLNKRQRTAVDCAEQN 228 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC---------------CCCTTSCCSGGGSCTT
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC---------------CcCCCCCCHHHHHHhC
Confidence 999999999999998 599999999999999999999999998 7889999999999888
Q ss_pred CC-HHHHHHHHHCCCCCC
Q psy11714 250 NN-YEILKILLDRGATLP 266 (272)
Q Consensus 250 ~~-~~iv~~Ll~~ga~~~ 266 (272)
++ .+++++|.+.++.++
T Consensus 229 ~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 229 SKIMELLQVVPSCVASLD 246 (269)
T ss_dssp CHHHHHTTC---------
T ss_pred CcHHHHHHHHHHhchhhh
Confidence 75 456666666666554
No 26
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.7e-33 Score=237.67 Aligned_cols=209 Identities=16% Similarity=0.133 Sum_probs=183.3
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
..+.++||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHG------ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLH 129 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 44578899999999999999999997 9999999999999999999999999999999999984 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCC------------------------------------------------CCccccC
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHG------------------------------------------------QPYVSEN 137 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~------------------------------------------------~~~~~~~ 137 (272)
+|+..++.+++++|+++|++++... ..+..+.
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCC
Confidence 9999999999999999999877422 1123446
Q ss_pred CcccHHHHHHhcCCC----------CccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHH
Q psy11714 138 KGRTIFMMLDELKDQ----------PEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIK 200 (272)
Q Consensus 138 ~~~t~l~~~~~~~~~----------~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~ 200 (272)
.+.||||+|+..... ..+.+++.+|..|.||||+|+..|+.+++++|+++|+++ +||||+|+.
T Consensus 210 ~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 788999999987432 126889999999999999999999999999999999998 599999999
Q ss_pred cCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy11714 201 EEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLP 266 (272)
Q Consensus 201 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~ 266 (272)
.++.+++++|+++|++++ .++..|.||+++| ..+++++|.+.+....
T Consensus 290 ~~~~~~v~~Ll~~gad~~---------------~~~~~g~tal~~a----~~~~~~~l~~~~~~~~ 336 (351)
T 3utm_A 290 AGHLQTCRLLLSYGSDPS---------------IISLQGFTAAQMG----NEAVQQILSESTPMRT 336 (351)
T ss_dssp HTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHS----CHHHHHHHHHC-----
T ss_pred cCcHHHHHHHHHcCCCCC---------------CcCCCCCChhhhh----hHHHHHHHHhcccccc
Confidence 999999999999999999 7889999999998 6789999998876543
No 27
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.4e-33 Score=220.83 Aligned_cols=178 Identities=22% Similarity=0.281 Sum_probs=164.2
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLH 106 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~ 106 (272)
...++|+.|+..|+.+.++.++..+ +.++|..|..|.||||+|+..|+.+++++|+++|++++ ||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDT-----TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLY 78 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCT-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 4567799999999999999999998 37999999999999999999999999999999999984 79999
Q ss_pred HHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11714 107 AIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLE 186 (272)
Q Consensus 107 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~ 186 (272)
|+..++.+++++|++++ +.+++..+..|.||||+|+..|+.+++++|++
T Consensus 79 A~~~~~~~~~~~Ll~~~-------------------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 127 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHA-------------------------------TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE 127 (201)
T ss_dssp HHHTTCHHHHHHHHHHS-------------------------------CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcc-------------------------------CcccccccCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999542 14566788899999999999999999999999
Q ss_pred CC-CCc-------hhHHHHHHHcCC-----HHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 187 YN-IQV-------KDALLHAIKEEY-----VEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 187 ~g-~~~-------~t~l~~A~~~~~-----~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+| +++ .||||+|+..++ .+++++|+++|++++ .++..|.||||+|+..|+.+
T Consensus 128 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~~~~ 192 (201)
T 3hra_A 128 DGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS---------------IKDNSGRTAMDYANQKGYTE 192 (201)
T ss_dssp HCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHHTCHH
T ss_pred cCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC---------------ccCCCCCCHHHHHHHcCCHh
Confidence 98 776 599999999998 999999999999999 78899999999999999999
Q ss_pred HHHHHHHCC
Q psy11714 254 ILKILLDRG 262 (272)
Q Consensus 254 iv~~Ll~~g 262 (272)
++++|+++|
T Consensus 193 ~~~~Ll~~G 201 (201)
T 3hra_A 193 ISKILAQYN 201 (201)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHhcC
Confidence 999999987
No 28
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.1e-33 Score=214.34 Aligned_cols=157 Identities=27% Similarity=0.364 Sum_probs=115.7
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLH 106 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~ 106 (272)
+-.++|+.|++.|+.++|+.||+.| +++|.+|..|.||||+|+..++.+++++|+++|++++ ||||+
T Consensus 3 dlg~~L~~Aa~~G~~~~v~~Ll~~G------advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~ 76 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVKDLIENG------ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHH 76 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHH
Confidence 4456799999999999999999997 9999999999999999999999999988888877763 45555
Q ss_pred HHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11714 107 AIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLE 186 (272)
Q Consensus 107 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~ 186 (272)
|+..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus 77 A~~~g~~~~v~~Ll~~gadv--------------------------------n~~d~~G~TpLh~A-------------- 110 (169)
T 4gpm_A 77 AAENGHKEVVKLLISKGADV--------------------------------NAKDSDGRTPLHHA-------------- 110 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHH--------------
T ss_pred HHHcCCHHHHHHHHHCcCCC--------------------------------CCCCCCCCCHHHHH--------------
Confidence 55555555555555554332 24455555555555
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy11714 187 YNIQVKDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLP 266 (272)
Q Consensus 187 ~g~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~ 266 (272)
+..|+.+++++|+++|++++ .+|..|.||||+|+.+|+.+++++|+++||++.
T Consensus 111 ------------~~~g~~~~v~~Ll~~gad~~---------------~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 111 ------------AENGHKEVVKLLISKGADVN---------------TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp ------------HHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred ------------HHcCCHHHHHHHHHcCCCcc---------------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 55556666677777777777 678889999999999999999999999999987
Q ss_pred CCC
Q psy11714 267 MPH 269 (272)
Q Consensus 267 ~~~ 269 (272)
--+
T Consensus 164 ~~~ 166 (169)
T 4gpm_A 164 HHH 166 (169)
T ss_dssp ---
T ss_pred CCC
Confidence 543
No 29
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7e-33 Score=228.30 Aligned_cols=177 Identities=18% Similarity=0.122 Sum_probs=159.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHH
Q psy11714 73 LNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMM 145 (272)
Q Consensus 73 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~ 145 (272)
.|+||||+|+..|+.+++++|+++|++++ ||||+|+..|+.+++++|+++|++++ .++..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~ 75 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN------GVTADWHTPLFN 75 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------CCCCCCCCHHHH
Confidence 58999999999999999999999999884 79999999999999999999999998 678899999999
Q ss_pred HHhcCCCCc-------cccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHH
Q psy11714 146 LDELKDQPE-------VFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILL 211 (272)
Q Consensus 146 ~~~~~~~~~-------~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll 211 (272)
|+..+.... +.+++. +..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 998765322 456654 456999999999999999999999999998 49999999999999999999
Q ss_pred hcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy11714 212 EWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDVR 272 (272)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 272 (272)
++|++++ . +..|.||||+|+..++.+++++|+++|++++.+|..+
T Consensus 155 ~~g~~~~---------------~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g 199 (261)
T 2xai_A 155 ESGADVN---------------Q-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEG 199 (261)
T ss_dssp HHTCCTT---------------C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCC---------------C-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 9999987 3 6689999999999999999999999999999998653
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-34 Score=247.67 Aligned_cols=209 Identities=19% Similarity=0.190 Sum_probs=182.5
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHH--------HCCCChh--
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVD-PLNRSSLIAAIENENIELINILL--------EYNIQVK-- 101 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~-~~g~t~L~~A~~~~~~~~v~~Ll--------~~g~~~~-- 101 (272)
....++||.|+..+. ++++.|+. .++|.+| ..|.||||+|+..|+.+++++|+ ++|++++
T Consensus 92 ~~g~t~L~~Aa~~~~-~~~~~L~~--------~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~ 162 (373)
T 2fo1_E 92 PESPIKLHTEAAGSY-AITEPITR--------ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM 162 (373)
T ss_dssp --CCCHHHHHHHSSS-CCCSCCST--------TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC
T ss_pred CCCccHHHHHhcCCc-hHHHHhcc--------ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 345677999999654 66665542 5677888 68999999999999988877776 7899884
Q ss_pred -----hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc-------c---ccccCCCCCCC
Q psy11714 102 -----DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------V---FNINCVDPLNR 166 (272)
Q Consensus 102 -----t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~---~~~~~~d~~~~ 166 (272)
||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..+.... + .+++..|..|.
T Consensus 163 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~ 236 (373)
T 2fo1_E 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPT------IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGM 236 (373)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSC
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHHCCCCCc------ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCC
Confidence 79999999999999999999999998 678899999999998765322 3 68899999999
Q ss_pred CHHHHHHHcC---CHHHHHHHHhCCCCc---------------hhHHHHHHHcCCHHHHHHHHhcC-ccCCCCCCcchhh
Q psy11714 167 SSLIAAIENE---NIELINILLEYNIQV---------------KDALLHAIKEEYVEAVEILLEWE-EKIHVHGQPYSWE 227 (272)
Q Consensus 167 t~L~~a~~~g---~~~~~~~Ll~~g~~~---------------~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~ 227 (272)
||||+|+..+ +.+++++|+++|+++ .||||+|+..|+.+++++|+++| ++++
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n--------- 307 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD--------- 307 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT---------
T ss_pred CHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc---------
Confidence 9999999998 899999999999876 38999999999999999999886 9998
Q ss_pred hhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 228 AVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 228 ~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
.+|..|.||||+|+..|+.++|++|+++|++++..|..
T Consensus 308 ------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~ 345 (373)
T 2fo1_E 308 ------KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDAT 345 (373)
T ss_dssp ------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSS
T ss_pred ------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCC
Confidence 78899999999999999999999999999999998864
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.2e-34 Score=232.62 Aligned_cols=191 Identities=15% Similarity=0.144 Sum_probs=168.8
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
..+.++||+|+..|+.++++.|++.+... +.++|.++..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGD--LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhcc--HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 34567799999999999999999876211 24789999999999999999999999999999999884 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILL 185 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll 185 (272)
+|+..++.+++++|+++|++... ...++..+..|.||||+|+..|+.+++++|+
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~--------------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 137 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHL--------------------------HSILKATNYNGHTCLHLASIHGYLGIVELLV 137 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSS--------------------------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcccchhH--------------------------HHHhhccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999998875431 1235677889999999999999999999999
Q ss_pred hCCCCc--------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy11714 186 EYNIQV--------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKI 257 (272)
Q Consensus 186 ~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~ 257 (272)
++|+++ .||||+|+..++.+++++|+++|++++ .++..|.||||+|+..++.+++++
T Consensus 138 ~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~tpl~~A~~~~~~~~~~~ 202 (236)
T 1ikn_D 138 SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN---------------RVTYQGYSPYQLTWGRPSTRIQQQ 202 (236)
T ss_dssp HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC---------------CCCTTCCCGGGGCTTSSCHHHHHH
T ss_pred HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------cccCCCCCHHHHHHccCchHHHHH
Confidence 999887 499999999999999999999999999 788999999999999999999999
Q ss_pred HHHCCCCCC
Q psy11714 258 LLDRGATLP 266 (272)
Q Consensus 258 Ll~~ga~~~ 266 (272)
|+++||++.
T Consensus 203 Ll~~ga~~~ 211 (236)
T 1ikn_D 203 LGQLTLENL 211 (236)
T ss_dssp HHTTSCGGG
T ss_pred HHHcchhhh
Confidence 999999765
No 32
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.9e-33 Score=230.85 Aligned_cols=198 Identities=19% Similarity=0.168 Sum_probs=164.6
Q ss_pred hhHHHHHHHcCCHH----HHHHHHHccCCCCCCCCccc----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCh----
Q psy11714 36 EKRFLLVAERGDCA----TVRKMLDELKDQPEVFNINC----VDPLNRSSLIAAIEN---ENIELINILLEYNIQV---- 100 (272)
Q Consensus 36 ~~~l~~a~~~g~~~----~~~~ll~~~~~~~~~~~~n~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~---- 100 (272)
.++|+.|+..|+.+ +++++++.+ +++|. +|..|.||||+|+.. |+.+++++|+++|+++
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g------~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNS------KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK 76 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHT------CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcC------CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh
Confidence 46799999999998 456666676 89998 899999999999999 9999999999987643
Q ss_pred --------------hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCC
Q psy11714 101 --------------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNR 166 (272)
Q Consensus 101 --------------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~ 166 (272)
.||||+|+..|+.+++++|+++|++++. ++..+..+ .+.+..+..|.
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~~~~-------------~~~~~~~~~g~ 137 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL------RACGRFFQ-------------KHQGTCFYFGE 137 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCCSGGGS-------------CCSSSCCCSCS
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cccccccc-------------ccccccccCCC
Confidence 3899999999999999999999988872 22222110 22334455699
Q ss_pred CHHHHHHHcCCHHHHHHHHh---CCCCc-------hhHHHHHHH--cCCHH-------HHHHHHhcCccCCCCCCcchhh
Q psy11714 167 SSLIAAIENENIELINILLE---YNIQV-------KDALLHAIK--EEYVE-------AVEILLEWEEKIHVHGQPYSWE 227 (272)
Q Consensus 167 t~L~~a~~~g~~~~~~~Ll~---~g~~~-------~t~l~~A~~--~~~~~-------~~~~Ll~~g~~~~~~~~~~~~~ 227 (272)
||||+|+..|+.+++++|++ +|+++ .||||+|+. .++.+ ++++|+++|++++...
T Consensus 138 tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~------ 211 (256)
T 2etb_A 138 LPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTV------ 211 (256)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTC------
T ss_pred CHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccc------
Confidence 99999999999999999999 99988 599999999 88888 9999999999993100
Q ss_pred hhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy11714 228 AVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLP 266 (272)
Q Consensus 228 ~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~ 266 (272)
...+.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 212 --~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 212 --QLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp --CGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred --ccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 0011788999999999999999999999999998653
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.4e-33 Score=231.52 Aligned_cols=211 Identities=17% Similarity=0.174 Sum_probs=165.4
Q ss_pred ccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcc----cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCC----
Q psy11714 31 ALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNIN----CVDPLNRSSLIAAIEN---ENIELINILLEYNIQ---- 99 (272)
Q Consensus 31 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n----~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~---- 99 (272)
......++|+.|+..|+.+.++.|++.+... +.+++ ..+..|.||||+|+.. |+.+++++|+++|++
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRS--KKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHS--CCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhc--ccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 3455678899999999999999998743100 25554 3578999999999987 999999999998753
Q ss_pred --------------hhhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCC
Q psy11714 100 --------------VKDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLN 165 (272)
Q Consensus 100 --------------~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~ 165 (272)
-.||||+|+..|+.+++++|+++|++++. ++..+. ....+....+..|
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~~------------~~~~~~~~~~~~g 148 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA------AANGDF------------FKKTKGRPGFYFG 148 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CBCSGG------------GSSCSSSCCCCSC
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc------cccccc------------cccccccccccCC
Confidence 24899999999999999999999998873 222210 0012344556689
Q ss_pred CCHHHHHHHcCCHHHHHHHHh---CCCCc-------hhHHHHHHHcCC---------HHHHHHHHhcCccCCCCCCcchh
Q psy11714 166 RSSLIAAIENENIELINILLE---YNIQV-------KDALLHAIKEEY---------VEAVEILLEWEEKIHVHGQPYSW 226 (272)
Q Consensus 166 ~t~L~~a~~~g~~~~~~~Ll~---~g~~~-------~t~l~~A~~~~~---------~~~~~~Ll~~g~~~~~~~~~~~~ 226 (272)
.||||+|+..|+.+++++|++ +|+++ +||||+|+..++ .+++++|+++|++++...
T Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~----- 223 (273)
T 2pnn_A 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTL----- 223 (273)
T ss_dssp BSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-----
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccc-----
Confidence 999999999999999999999 89988 599999999988 899999999999987210
Q ss_pred hhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCC
Q psy11714 227 EAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGA-TLPMPH 269 (272)
Q Consensus 227 ~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga-~~~~~~ 269 (272)
...+.++..|.||||+|+..|+.+++++|+++|| |+....
T Consensus 224 ---~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~ 264 (273)
T 2pnn_A 224 ---KLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRH 264 (273)
T ss_dssp ---CGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC------
T ss_pred ---ccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhh
Confidence 1112478899999999999999999999999999 766554
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.5e-33 Score=235.37 Aligned_cols=200 Identities=18% Similarity=0.226 Sum_probs=175.3
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHH
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DAL 104 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l 104 (272)
...+.++||+|+..|+.++++.|++.| +++|..+ |.||||+|+..|+.+++++|+++|++++ |||
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L 99 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAG------ALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTAL 99 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTT------GGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCC------CCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHH
Confidence 355678899999999999999999997 8888874 8999999999999999999999999984 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCc-ccHHHHHHhcCCCCc-------cccccCCCC-CCCCHHHHHHHc
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKG-RTIFMMLDELKDQPE-------VFNINCVDP-LNRSSLIAAIEN 175 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~-~t~l~~~~~~~~~~~-------~~~~~~~d~-~~~t~L~~a~~~ 175 (272)
|+|+..|+.+++++|+++|++++ .++..| .||||+|+..+.... +.+. .+. .|.||||+|+..
T Consensus 100 ~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~g~t~L~~A~~~ 171 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKNWRLM------FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKN 171 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHCGGGG------GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT--CCCSTHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhcCCCCC------ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc--ccccCCccHHHHHHHc
Confidence 99999999999999999999998 677777 799999998765322 2333 333 899999999999
Q ss_pred CCHHHHHHHHhCCCCc-------hhH-HHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHH
Q psy11714 176 ENIELINILLEYNIQV-------KDA-LLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAA 247 (272)
Q Consensus 176 g~~~~~~~Ll~~g~~~-------~t~-l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~ 247 (272)
|+.+++++|+++|+++ .|| ||+|+..++.+++++|+++|++++ ..+ +.|+
T Consensus 172 g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~---------------~~~-------~~a~ 229 (285)
T 3kea_A 172 GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY---------------SAN-------LENV 229 (285)
T ss_dssp TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCST---------------TTT-------GGGG
T ss_pred ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC---------------CCC-------hhhh
Confidence 9999999999999887 376 999999999999999999999998 333 2557
Q ss_pred HcCCHHHHHHHHHCCCCCCCCC
Q psy11714 248 HMNNYEILKILLDRGATLPMPH 269 (272)
Q Consensus 248 ~~~~~~iv~~Ll~~ga~~~~~~ 269 (272)
..|+.+++++|+++|++++...
T Consensus 230 ~~~~~~iv~~Ll~~g~~~~~~~ 251 (285)
T 3kea_A 230 LLDDAEIAKMIIEKHVEYKSDS 251 (285)
T ss_dssp TTTCHHHHHHHHHHHHHHTTCT
T ss_pred hcCCHHHHHHHHHcCCCCCCcc
Confidence 7899999999999999877543
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.6e-32 Score=219.23 Aligned_cols=174 Identities=21% Similarity=0.214 Sum_probs=157.4
Q ss_pred CCHHHHHHHHHccCCCCCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHH
Q psy11714 46 GDCATVRKMLDELKDQPEVFNINCV-DPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVE 117 (272)
Q Consensus 46 g~~~~~~~ll~~~~~~~~~~~~n~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~ 117 (272)
|+.+++++|++.| .+++.. |..|.||||+|+..|+.+++++|+++|++++ ||||+|+..++.++++
T Consensus 2 g~~~~i~~Ll~~g------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 75 (223)
T 2f8y_A 2 DAPAVISDFIYQG------ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 75 (223)
T ss_dssp ---CCEETTEETT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHHcC------CCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 5677788888887 777665 7899999999999999999999999999884 7999999999999999
Q ss_pred HHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc------
Q psy11714 118 ILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV------ 191 (272)
Q Consensus 118 ~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~------ 191 (272)
+|+++++ .+++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 76 ~Ll~~~~-------------------------------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 124 (223)
T 2f8y_A 76 ILIRNRA-------------------------------TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 124 (223)
T ss_dssp HHHHBTT-------------------------------SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred HHHHcCC-------------------------------CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCC
Confidence 9999764 245677889999999999999999999999999988
Q ss_pred -hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy11714 192 -KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHD 270 (272)
Q Consensus 192 -~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~ 270 (272)
.||||+|+..++.+++++|+++|++++ .++..|.||||+|+..++.+++++|+++|++++.++.
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 189 (223)
T 2f8y_A 125 GKSALHWAAAVNNVDAAVVLLKNGANKD---------------MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 189 (223)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 599999999999999999999999998 7788999999999999999999999999999999876
Q ss_pred C
Q psy11714 271 V 271 (272)
Q Consensus 271 ~ 271 (272)
.
T Consensus 190 ~ 190 (223)
T 2f8y_A 190 M 190 (223)
T ss_dssp T
T ss_pred c
Confidence 4
No 36
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-31 Score=216.26 Aligned_cols=180 Identities=19% Similarity=0.196 Sum_probs=164.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCh--------hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHH
Q psy11714 72 PLNRSSLIAAIENENIELINILLEYNIQV--------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIF 143 (272)
Q Consensus 72 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l 143 (272)
..+.+||+.|+..|+.+.++.|++.+... .||||+|+..|+.+++++|+++|++++ .++..|.|||
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~L 77 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN------DKDDAGWSPL 77 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC------CCCTTSCCHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC------CcCCCCCCHH
Confidence 45789999999999999999999876543 489999999999999999999999988 6788999999
Q ss_pred HHHHhcCCCC-------ccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHH
Q psy11714 144 MMLDELKDQP-------EVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEI 209 (272)
Q Consensus 144 ~~~~~~~~~~-------~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~ 209 (272)
|+|+..+... .+.+++.++..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 9999876532 26889999999999999999999999999999999987 599999999999999999
Q ss_pred HHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy11714 210 LLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDVR 272 (272)
Q Consensus 210 Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 272 (272)
|+++|++++ .++..|.||||+|+..++.+++++|+++|++++.++.++
T Consensus 158 Ll~~g~~~~---------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 205 (231)
T 3aji_A 158 LLFYKASTN---------------IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEE 205 (231)
T ss_dssp HHHTTCCSC---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred HHhcCCCcc---------------ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 999999998 778899999999999999999999999999999988653
No 37
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=230.93 Aligned_cols=173 Identities=16% Similarity=0.138 Sum_probs=129.7
Q ss_pred hhhhHHHHHHHcCCHH-HHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 34 PQEKRFLLVAERGDCA-TVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~-~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
...++|+.|+..++.+ .++.|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++ ||++
T Consensus 51 ~~~t~L~~a~~~~~~~~~v~~Ll~~G------advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~ 124 (269)
T 4b93_B 51 EFCHPLCQCPKCAPAQKRLAKVPASG------LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLH 124 (269)
T ss_dssp ------------------------CC------CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccc
Confidence 3456789999887765 678888887 9999999999999999999999999999999999884 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCc-------cccccCCCCCCCCHHHHHHHcCCH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPE-------VFNINCVDPLNRSSLIAAIENENI 178 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~-------~~~~~~~d~~~~t~L~~a~~~g~~ 178 (272)
+|+..++.+++++|+++|++++ .++..|.||||+|+..+.... +++++.++..|.||||+|+..|+.
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~n------~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKPN------KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSC------CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred cccccChHHHHHHHHHCCCCCC------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH
Confidence 9999999999999999999998 678999999999999876433 789999999999999999999999
Q ss_pred HHHHHHHhCCCCc-------hhHHHHHHHcCC-HHHHHHHHhcCccCC
Q psy11714 179 ELINILLEYNIQV-------KDALLHAIKEEY-VEAVEILLEWEEKIH 218 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-------~t~l~~A~~~~~-~~~~~~Ll~~g~~~~ 218 (272)
+++++|+++|+|+ +||||+|+.+++ .+++++|...++.++
T Consensus 199 ~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 199 FVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence 9999999999998 599999998776 455666666665554
No 38
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=1.5e-32 Score=236.63 Aligned_cols=184 Identities=15% Similarity=0.113 Sum_probs=161.8
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccC
Q psy11714 65 FNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSEN 137 (272)
Q Consensus 65 ~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 137 (272)
.+.+..|..|.||||+|+..|+.++|++|+++|++++ ||||+|+..|+.+++++|+++|++++ ..
T Consensus 11 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--------~~ 82 (364)
T 3ljn_A 11 LNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS--------LW 82 (364)
T ss_dssp -----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC--------CB
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc--------cc
Confidence 6777888999999999999999999999999999984 79999999999999999999998654 35
Q ss_pred CcccHHHHHHhcCCCCc-----------cccccC-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHhC
Q psy11714 138 KGRTIFMMLDELKDQPE-----------VFNINC-----------------VDPLNRSSLIAAIENE--NIELINILLEY 187 (272)
Q Consensus 138 ~~~t~l~~~~~~~~~~~-----------~~~~~~-----------------~d~~~~t~L~~a~~~g--~~~~~~~Ll~~ 187 (272)
.|.||||+|+..+.... +.+++. .|..|.||||+|+..| +.+++++|+++
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 79999999998765322 233333 7889999999999999 99999999999
Q ss_pred CCCc-------hhHHHHHHHcCCHHHHHHHHhcCcc-----CCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHH
Q psy11714 188 NIQV-------KDALLHAIKEEYVEAVEILLEWEEK-----IHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEIL 255 (272)
Q Consensus 188 g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv 255 (272)
|+++ .||||+|+..|+.+++++|+++|++ ++ ..+..|.||||+|+..|+.++|
T Consensus 163 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~---------------~~~~~g~t~L~~A~~~g~~~~v 227 (364)
T 3ljn_A 163 GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD---------------YANKQGNSHLHWAILINWEDVA 227 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT---------------CCCTTCCCTTHHHHTTTCHHHH
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc---------------ccCCCCCcHHHHHHHcCCHHHH
Confidence 9998 5999999999999999999999998 76 7788999999999999999999
Q ss_pred HHHHHCCCCCCCCCCC
Q psy11714 256 KILLDRGATLPMPHDV 271 (272)
Q Consensus 256 ~~Ll~~ga~~~~~~~~ 271 (272)
++|+++|++++..|..
T Consensus 228 ~~Ll~~gad~~~~d~~ 243 (364)
T 3ljn_A 228 MRFVEMGIDVNMEDNE 243 (364)
T ss_dssp HHHHTTTCCTTCCCTT
T ss_pred HHHHHcCCCCCCCCCC
Confidence 9999999999998864
No 39
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.98 E-value=4.6e-32 Score=220.09 Aligned_cols=178 Identities=24% Similarity=0.254 Sum_probs=160.1
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC----Ch-------h
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNI----QV-------K 101 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~-------~ 101 (272)
..+.++|++|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|+++|. ++ .
T Consensus 44 ~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 44 NLRQTPLHLAVITTLPSVVRLLVTAG------ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHcC------CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCC
Confidence 44677899999999999999999997 9999999999999999999999999999999987 44 3
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCC-CCCCCHHHHHHHcCCHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVD-PLNRSSLIAAIENENIEL 180 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d-~~~~t~L~~a~~~g~~~~ 180 (272)
||||+|+..++.+++++|+++|++++ ..+ ..|.||||+|+..|+.++
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~g~~~~--------------------------------~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLERGADID--------------------------------AVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT--------------------------------CCCTTTCCCHHHHHHHTTCHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcc--------------------------------cccccCCCcHHHHHHHcCCHHH
Confidence 79999999999999999999886654 555 679999999999999999
Q ss_pred HHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 181 INILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 181 ~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.||||+|+..|+.+
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~tpl~~A~~~~~~~ 230 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS---------------LKNCHNDTPLMVARSRRVID 230 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTSCCTTTTCSSHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC---------------CcCCCCCCHHHHHHhcCcHH
Confidence 99999999998 599999999999999999999999998 78899999999999999999
Q ss_pred HHHHHHHCCC
Q psy11714 254 ILKILLDRGA 263 (272)
Q Consensus 254 iv~~Ll~~ga 263 (272)
+++.|.++++
T Consensus 231 i~~~l~~~~a 240 (241)
T 1k1a_A 231 ILRGKATRPA 240 (241)
T ss_dssp HHTC------
T ss_pred HHhhhccCCC
Confidence 9999999886
No 40
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=5.8e-33 Score=228.31 Aligned_cols=202 Identities=16% Similarity=0.164 Sum_probs=163.2
Q ss_pred hhhHHHHHHHcCCHHHHHHHHH----ccCCCCCCCCcccCC----CCCCcHHHHHH---HcCCHHHHHHHHHCCCCh---
Q psy11714 35 QEKRFLLVAERGDCATVRKMLD----ELKDQPEVFNINCVD----PLNRSSLIAAI---ENENIELINILLEYNIQV--- 100 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~----~~~~~~~~~~~n~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~g~~~--- 100 (272)
..++|+.|+..|+.+.++.+++ .+ .+++..+ ..|.||||+|+ ..|+.+++++|+++|+++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~------~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHK------KRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHT------CCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcC------CCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 4567999999999997666665 65 7777665 67999999999 679999999999987531
Q ss_pred ---------------hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCC
Q psy11714 101 ---------------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLN 165 (272)
Q Consensus 101 ---------------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~ 165 (272)
.||||+|+..|+.+++++|+++|++++. .+.++ .....+.+..+..|
T Consensus 79 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~------------~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 79 REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA------QARGR------------FFQPKDEGGYFYFG 140 (260)
T ss_dssp HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCEEC------------CCSSSCCCCSCCSC
T ss_pred HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc------ccccc------------ccCcccccccccCC
Confidence 4899999999999999999999988873 11110 00112233444789
Q ss_pred CCHHHHHHHcCCHHHHHHHHh---CCCCc-------hhHHHHHHHcCC---------HHHHHHHHhcCccCCCCCCcchh
Q psy11714 166 RSSLIAAIENENIELINILLE---YNIQV-------KDALLHAIKEEY---------VEAVEILLEWEEKIHVHGQPYSW 226 (272)
Q Consensus 166 ~t~L~~a~~~g~~~~~~~Ll~---~g~~~-------~t~l~~A~~~~~---------~~~~~~Ll~~g~~~~~~~~~~~~ 226 (272)
.||||+|+..|+.+++++|++ +|+++ +||||+|+..++ .+++++|+++|++++..
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~------ 214 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPD------ 214 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTT------
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccc------
Confidence 999999999999999999999 89988 599999998887 79999999999998521
Q ss_pred hhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy11714 227 EAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMP 268 (272)
Q Consensus 227 ~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~ 268 (272)
....+.++..|.||||+|+..|+.+++++|+++|++...+
T Consensus 215 --~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 215 --TNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAA 254 (260)
T ss_dssp --CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC-
T ss_pred --cchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccc
Confidence 0111267899999999999999999999999999876544
No 41
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=3.3e-30 Score=208.77 Aligned_cols=168 Identities=16% Similarity=0.168 Sum_probs=148.3
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCh-------hhHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYN-IQV-------KDAL 104 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~-------~t~l 104 (272)
..+.++|+.|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|+++| .++ .|||
T Consensus 42 ~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 42 EDQRTPLMEAAENNHLEAVKYLIKAG------ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTT------CCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCC------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 34567899999999999999999997 899999999999999999999999999999998 566 3799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCC-------CccccccCCCCCCCCHHHHHHHcCC
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQ-------PEVFNINCVDPLNRSSLIAAIENEN 177 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~-------~~~~~~~~~d~~~~t~L~~a~~~g~ 177 (272)
|+|+..++.+++++|+++|++++ .++..|.||||+|+..+.. ..+.+++.+|..|.||||+|+..|+
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSDIN------IRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC------ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 99999999999999999999988 6788999999999987653 2368999999999999999999999
Q ss_pred HHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHh
Q psy11714 178 IELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLE 212 (272)
Q Consensus 178 ~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~ 212 (272)
.+++++|+++|+++ .|||++|+..++.+.+..|++
T Consensus 190 ~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 190 YDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 377777777776655555443
No 42
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=2.2e-30 Score=214.85 Aligned_cols=158 Identities=20% Similarity=0.169 Sum_probs=142.3
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---h-------hhHHHHHHHcCcHHHHHHHHccccccccCCCCcccc
Q psy11714 67 INCVDPLNRSSLIAAIENENIELINILLEYNIQ---V-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSE 136 (272)
Q Consensus 67 ~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~ 136 (272)
++.+|..|.||||+|+..|+.+++++|+++|++ + .||||+|+..|+.+++++|+++|++++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~--------- 72 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL--------- 72 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---------
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------
Confidence 467889999999999999999999999999887 4 389999999999999999999886554
Q ss_pred CCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC--------------------------
Q psy11714 137 NKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQ-------------------------- 190 (272)
Q Consensus 137 ~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~-------------------------- 190 (272)
.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 73 -----------------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (282)
T 1oy3_D 73 -----------------------VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129 (282)
T ss_dssp -----------------------CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------
T ss_pred -----------------------CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhh
Confidence 6778899999999999999999999988754
Q ss_pred ---------------------c-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCC-CCCCc
Q psy11714 191 ---------------------V-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTF-TPDIT 241 (272)
Q Consensus 191 ---------------------~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~t 241 (272)
+ .||||+|+..|+.+++++|+++|++++ ..+ ..|.|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------------~~~~~~g~t 194 (282)
T 1oy3_D 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN---------------KPEPTCGRT 194 (282)
T ss_dssp --------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT---------------CCCTTTCCC
T ss_pred hccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC---------------CCCCCCCcC
Confidence 1 489999999999999999999999998 455 45999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 242 PLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 242 ~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
|||+|+..|+.+++++|+++|++++.++..
T Consensus 195 pL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 224 (282)
T 1oy3_D 195 PLHLAVEAQAASVLELLLKAGADPTARMYG 224 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccccC
Confidence 999999999999999999999999998854
No 43
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=4.7e-30 Score=207.69 Aligned_cols=185 Identities=15% Similarity=0.145 Sum_probs=164.9
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCc
Q psy11714 67 INCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKG 139 (272)
Q Consensus 67 ~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 139 (272)
++..|.+|.|+|+.|+..|+.+++++|++.|++++ ||||+|+..++.+++++|+++|++++. ..+..+
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-----~~~~~~ 76 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ-----LGGDLN 76 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CBTTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh-----hcCCcC
Confidence 45678889999999999999999999999999984 699999999999999999999988762 334568
Q ss_pred ccHHHHHHhcCCCCc-------cccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCC-H
Q psy11714 140 RTIFMMLDELKDQPE-------VFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEY-V 204 (272)
Q Consensus 140 ~t~l~~~~~~~~~~~-------~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~-~ 204 (272)
.|||++|+..+.... +.+++..+..|.||||+|+..|+.+++++|+++|+++ .||||+|+..+. .
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSS
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChH
Confidence 999999998765322 6788999999999999999999999999999999888 499999996665 8
Q ss_pred HHHHHHHhcCccCCCCCCcchhhhhhcCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 205 EAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFT-PDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 205 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
+++++|+++|++++ ..+. .|.||||+|+..++.+++++|+++|++++..+..
T Consensus 157 ~~~~~L~~~~~~~~---------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 209 (240)
T 3eu9_A 157 DPTRLLLTFNVSVN---------------LGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIK 209 (240)
T ss_dssp TTHHHHHHTTCCTT---------------CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTT
T ss_pred HHHHHHHhcCCCcc---------------hhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 99999999999998 4554 8999999999999999999999999999988754
No 44
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=1e-29 Score=204.66 Aligned_cols=175 Identities=17% Similarity=0.200 Sum_probs=156.0
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCC--CChh-------h
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINC-VDPLNRSSLIAAIENENIELINILLEYN--IQVK-------D 102 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~-------t 102 (272)
..+.++|++|+..|+.++++.|++.+. ..+++. .+..|.||||+|+..|+.+++++|+++| ++++ |
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t 109 (228)
T 2dzn_A 34 QDGRIPLHWSVSFQAHEITSFLLSKME----NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 109 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTCT----TCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccc----cccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCC
Confidence 456778999999999999999999862 255666 7889999999999999999999999998 6663 7
Q ss_pred HHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHH
Q psy11714 103 ALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELIN 182 (272)
Q Consensus 103 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~ 182 (272)
|||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.++++
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENGAS--------------------------------VRIKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--------------------------------SCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCCHhHHHHHHHcCCC--------------------------------ccccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999998755 4477889999999999999999999
Q ss_pred HHHhCC-CCc-------hhHHHHHHHcCCHHHHHHHH-hcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 183 ILLEYN-IQV-------KDALLHAIKEEYVEAVEILL-EWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 183 ~Ll~~g-~~~-------~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+|+++| +++ +||||+|+..++.+++++|+ ++|++++ .+|..|.||+++|+.. +
T Consensus 158 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~---------------~~~~~g~t~l~~A~~~---~ 219 (228)
T 2dzn_A 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD---------------LVDNKGAKAEDVALNE---Q 219 (228)
T ss_dssp HHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC---------------CBCTTSCBGGGGCSST---T
T ss_pred HHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC---------------ccCCCCCcHHHHHHHH---H
Confidence 999999 776 59999999999999999999 8999999 7889999999999754 6
Q ss_pred HHHHHHHC
Q psy11714 254 ILKILLDR 261 (272)
Q Consensus 254 iv~~Ll~~ 261 (272)
++++|+++
T Consensus 220 ~~~~l~~~ 227 (228)
T 2dzn_A 220 VKKFFLNN 227 (228)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 77777764
No 45
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=5.2e-30 Score=201.39 Aligned_cols=150 Identities=26% Similarity=0.228 Sum_probs=138.9
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCC
Q psy11714 66 NINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENK 138 (272)
Q Consensus 66 ~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 138 (272)
.+|.+|..|.||||+|+..|+.+++++|+++|++++ ||||+|+..++.+++++|+++|+++
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------ 94 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV------------ 94 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT------------
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC------------
Confidence 456788999999999999999999999999998874 7999999999999999999987554
Q ss_pred cccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHH
Q psy11714 139 GRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILL 211 (272)
Q Consensus 139 ~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll 211 (272)
+.+|..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+
T Consensus 95 --------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 95 --------------------NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp --------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred --------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467889999999999999999999999999988 59999999999999999999
Q ss_pred hcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy11714 212 EWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRG 262 (272)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~g 262 (272)
++|++++ .++..|.||||+|+..++.+++++|+++|
T Consensus 155 ~~ga~~~---------------~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 155 ELGADIS---------------ARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HTTCCTT---------------CBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HCCCCCC---------------CcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999998 78899999999999999999999999876
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=213.95 Aligned_cols=174 Identities=20% Similarity=0.245 Sum_probs=156.1
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-Chh-------hHHHHHH--
Q psy11714 39 FLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNI-QVK-------DALLHAI-- 108 (272)
Q Consensus 39 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~-------t~l~~A~-- 108 (272)
++.|+..|+.+.++.++..+. ...+|.+|..|.||||+|+..|+.+++++|+++|+ +++ ||||+|+
T Consensus 80 l~~a~~~~~~~~~~~l~~~~~----~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 80 AHPELVRRHLVTFRAMSARLL----DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp CCHHHHHHHHHHHHHHCHHHH----HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHH----hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 467788889999999988751 13488999999999999999999999999999998 663 7999999
Q ss_pred ---HcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy11714 109 ---KEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILL 185 (272)
Q Consensus 109 ---~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll 185 (272)
..++.+++++|+++|+. .+..+..|.||||+|+..|+.+++++|+
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 203 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNI--------------------------------NAKASQAGQTALMLAVSHGRVDVVKALL 203 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCT--------------------------------TCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCC--------------------------------ccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 66889999999998744 3466788999999999999999999999
Q ss_pred hCCCCc-------hhHHHHHHHcCCHHHHHHHHh-cCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy11714 186 EYNIQV-------KDALLHAIKEEYVEAVEILLE-WEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKI 257 (272)
Q Consensus 186 ~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~ 257 (272)
++|+++ .||||+|+..|+.+++++|++ .|++++ .+|..|.||||+|+..|+.+++++
T Consensus 204 ~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~---------------~~d~~g~TpL~~A~~~g~~~iv~~ 268 (276)
T 4hbd_A 204 ACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS---------------LTDRDGSTALMVALDAGQSEIASM 268 (276)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT---------------CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc---------------CcCCCCCCHHHHHHHcCCHHHHHH
Confidence 999998 599999999999999999999 899999 788999999999999999999999
Q ss_pred HHHCCC
Q psy11714 258 LLDRGA 263 (272)
Q Consensus 258 Ll~~ga 263 (272)
|++++.
T Consensus 269 Ll~~~~ 274 (276)
T 4hbd_A 269 LYSRMN 274 (276)
T ss_dssp HHHHCC
T ss_pred HHhccC
Confidence 999863
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.6e-28 Score=198.25 Aligned_cols=152 Identities=22% Similarity=0.219 Sum_probs=139.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC-CCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHH
Q psy11714 73 LNRSSLIAAIENENIELINILLEY-NIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFM 144 (272)
Q Consensus 73 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~ 144 (272)
.|.||||+|+..|+.+++++|++. |++++ ||||+|+..|+.+++++|+++|+++..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------------- 65 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF---------------- 65 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG----------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc----------------
Confidence 488999999999999999999998 88884 799999999999999999999987641
Q ss_pred HHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc--------------------hhHHHHHHHcCCH
Q psy11714 145 MLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--------------------KDALLHAIKEEYV 204 (272)
Q Consensus 145 ~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--------------------~t~l~~A~~~~~~ 204 (272)
...+..|..|.||||+|+..|+.+++++|+++|+++ .||||+|+..|+.
T Consensus 66 -----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 134 (232)
T 2rfa_A 66 -----------EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE 134 (232)
T ss_dssp -----------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH
T ss_pred -----------ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCH
Confidence 334677889999999999999999999999999876 4899999999999
Q ss_pred HHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHH----HHHHHCCCCCC
Q psy11714 205 EAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEIL----KILLDRGATLP 266 (272)
Q Consensus 205 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv----~~Ll~~ga~~~ 266 (272)
+++++|+++|++++ .+|..|.||||+|+..++.+++ ++|+++|++++
T Consensus 135 ~~v~~Ll~~ga~~~---------------~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 135 EIVRLLIEHGADIR---------------AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp HHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred HHHHHHHHCCCCCC---------------CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 99999999999999 7889999999999999999988 99999999884
No 48
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.6e-29 Score=191.03 Aligned_cols=150 Identities=21% Similarity=0.263 Sum_probs=100.7
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHA 107 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A 107 (272)
..++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+. |+.+++++|+++|++++ ||||+|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNN------VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDA 77 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSC------CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCC------CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 456677777777777777777765 7777777777777777776 77777777776666552 355555
Q ss_pred HHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy11714 108 IKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEY 187 (272)
Q Consensus 108 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~ 187 (272)
+..++.+++++|+++|+++ +.+|..|.
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~--------------------------------~~~~~~g~--------------------- 104 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADV--------------------------------NIEDNEGN--------------------- 104 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCT--------------------------------TCCCTTSC---------------------
T ss_pred HHcCCHHHHHHHHHcCCCC--------------------------------CCcCCCCC---------------------
Confidence 5555555555555444322 23344444
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHHhcCcc-CCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy11714 188 NIQVKDALLHAIKEEYVEAVEILLEWEEK-IHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGAT 264 (272)
Q Consensus 188 g~~~~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~ 264 (272)
||||+|+..++.+++++|+++|++ ++ .++..|.||||+|+..++.+++++|+++|||
T Consensus 105 -----t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 105 -----LPLHLAAKEGHLRVVEFLVKHTASNVG---------------HRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp -----CHHHHHHHTTCHHHHHHHHHHSCCCTT---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred -----CHHHHHHHcCCHHHHHHHHHccCCCCC---------------CcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 455555555666666666666665 35 6778899999999999999999999999986
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=5.4e-30 Score=207.68 Aligned_cols=156 Identities=21% Similarity=0.147 Sum_probs=137.3
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHCCC----Ch-------hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccC
Q psy11714 69 CVDPLNRSSLIAAIENENIELINILLEYNI----QV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSEN 137 (272)
Q Consensus 69 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 137 (272)
.+|..|.||||+|+..|+.+++++|++.+. ++ .||||+|+..++.+++++|+++|+++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------- 71 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP----------- 71 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-----------
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------
Confidence 477899999999999999999999998765 34 38999999999999999999987654
Q ss_pred CcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------------hhHHHHHHHcCCH
Q psy11714 138 KGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------------KDALLHAIKEEYV 204 (272)
Q Consensus 138 ~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------------~t~l~~A~~~~~~ 204 (272)
+.+|..|.||||+|+..|+.+++++|++.|++. .||||+|+..++.
T Consensus 72 ---------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 130 (236)
T 1ikn_D 72 ---------------------ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 130 (236)
T ss_dssp ---------------------CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCH
T ss_pred ---------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCH
Confidence 467889999999999999999999999998752 5999999999999
Q ss_pred HHHHHHHhcCccCCCCCCcchhhhhhcCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 205 EAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFT-PDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 205 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
+++++|+++|++++ .++. .|.||||+|+..|+.+++++|+++|++++.++.+
T Consensus 131 ~~v~~Ll~~g~~~~---------------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 183 (236)
T 1ikn_D 131 GIVELLVSLGADVN---------------AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 183 (236)
T ss_dssp HHHHHHHHHTCCTT---------------CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTT
T ss_pred HHHHHHHHcCCCCC---------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCC
Confidence 99999999999998 6666 8999999999999999999999999999998865
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.1e-28 Score=189.92 Aligned_cols=151 Identities=23% Similarity=0.258 Sum_probs=106.9
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCc
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEY 112 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~ 112 (272)
....+.|+.|+..|+.+++++|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------- 74 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANG------ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN----------- 74 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----------
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----------
Confidence 34456777888888888888888776 7777777777778777777777777777777666542
Q ss_pred HHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-
Q psy11714 113 VEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV- 191 (272)
Q Consensus 113 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~- 191 (272)
.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 75 -----------------------------------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 107 (169)
T 2y1l_E 75 -----------------------------------------------AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN 107 (169)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred -----------------------------------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 23344555555555555555555555555444
Q ss_pred ------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy11714 192 ------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRG 262 (272)
Q Consensus 192 ------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~g 262 (272)
.||||+|+..++.+++++|+++|++++ .++..|.|||++|+..++.+++++|+++|
T Consensus 108 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 108 ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN---------------AQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 356666666667777777777777777 67888999999999999999999999887
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=4.9e-29 Score=192.31 Aligned_cols=157 Identities=20% Similarity=0.241 Sum_probs=104.9
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVEA 115 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~~~ 115 (272)
..+|+.|+..|+.+.++++++.+ ...++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------------- 63 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKG-----DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-------------- 63 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTC-----SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT--------------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcC-----cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch--------------
Confidence 34677888888888888888776 24477777778788887777777777777777666652
Q ss_pred HHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc----
Q psy11714 116 VEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV---- 191 (272)
Q Consensus 116 ~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~---- 191 (272)
.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 64 --------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (172)
T 3v30_A 64 --------------------------------------------ILAKERESALSLASTGGYTDIVGLLLERDVDINIYD 99 (172)
T ss_dssp --------------------------------------------CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred --------------------------------------------hhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC
Confidence 22334444444444444444444444444444
Q ss_pred ---hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy11714 192 ---KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMP 268 (272)
Q Consensus 192 ---~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~ 268 (272)
.||||+|+..++.+++++|+++|++++ .++..|.||||+|+..++.+++++|+++|+++..+
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 164 (172)
T 3v30_A 100 WNGGTPLLYAVRGNHVKCVEALLARGADLT---------------TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQS 164 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---------------ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence 245555555666666677777777776 66778888888888888888888888888877766
Q ss_pred CC
Q psy11714 269 HD 270 (272)
Q Consensus 269 ~~ 270 (272)
+.
T Consensus 165 ~~ 166 (172)
T 3v30_A 165 NL 166 (172)
T ss_dssp --
T ss_pred cC
Confidence 53
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=2.8e-29 Score=213.41 Aligned_cols=174 Identities=20% Similarity=0.192 Sum_probs=143.9
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCCCCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHc
Q psy11714 39 FLLVAERGDCATVRKMLDELKDQPEVFNINC-VDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKE 110 (272)
Q Consensus 39 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~ 110 (272)
++.++..+..++++.|++.| +++|. +|..|.||||+|+..|+.++|++|+++|++++ ||||+|+..
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g------~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQ------LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSC------CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHS
T ss_pred hHHHHHhhHHHHHHHHHhcC------CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 45666666777778888776 99999 89999999999999999999999999999984 799999999
Q ss_pred Cc---HHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHH----cCCHHHHHH
Q psy11714 111 EY---VEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIE----NENIELINI 183 (272)
Q Consensus 111 ~~---~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~----~g~~~~~~~ 183 (272)
|+ .++++.|++++. .+++.+|..|.||||+|+. .|+.+++++
T Consensus 175 g~~~~~~~~~~ll~~~~-------------------------------~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~ 223 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLY-------------------------------PCLILEDSMNRTILHHIIITSGMTGCSAAAKY 223 (327)
T ss_dssp SHHHHTTCHHHHHHHHG-------------------------------GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHH
T ss_pred cccccHHHHHHHHHhhh-------------------------------ccccCCCCCCCCHHHHHHHHccccccHHHHHH
Confidence 88 678888888652 2356778899999999998 899999999
Q ss_pred HHhC--------------------CCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCC
Q psy11714 184 LLEY--------------------NIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTF 236 (272)
Q Consensus 184 Ll~~--------------------g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (272)
|++. |+++ .||||+|+. +++|+++ +++ .++
T Consensus 224 Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n---------------~~d 280 (327)
T 1sw6_A 224 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLN---------------AQD 280 (327)
T ss_dssp HHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTT---------------CCC
T ss_pred HHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCC---------------CCC
Confidence 9876 6666 589999885 8889988 455 678
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy11714 237 TPDITPLILAAHMNNYEILKILLDRGATLPMPHDVR 272 (272)
Q Consensus 237 ~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 272 (272)
..|.||||+|+..|+.++|++|+++||+++.+|.++
T Consensus 281 ~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 316 (327)
T 1sw6_A 281 SNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG 316 (327)
T ss_dssp TTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 899999999999999999999999999999998653
No 53
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.3e-29 Score=210.77 Aligned_cols=174 Identities=18% Similarity=0.094 Sum_probs=145.2
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
..+.++||+|+..|+.++++.|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g------a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 144 (299)
T 1s70_B 71 VDGLTALHQACIDDNVDMVKFLVENG------ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLD 144 (299)
T ss_dssp TTCCBHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 45678899999999999999999997 9999999999999999999999999999999999884 7999
Q ss_pred HHHHcCcHHHHHHHHc-ccccccc--------------------CCCCccccCCcccHHHHHHhcCCC-------Ccccc
Q psy11714 106 HAIKEEYVEAVEILLE-WEEKIHV--------------------HGQPYVSENKGRTIFMMLDELKDQ-------PEVFN 157 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~-~g~~~~~--------------------~~~~~~~~~~~~t~l~~~~~~~~~-------~~~~~ 157 (272)
+|+..++.++++.++. .|++++. .......+..|.||||+|+..+.. ..+++
T Consensus 145 ~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d 224 (299)
T 1s70_B 145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224 (299)
T ss_dssp HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred HHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC
Confidence 9999999999987775 3443321 001123456799999999987653 23689
Q ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhc
Q psy11714 158 INCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEW 213 (272)
Q Consensus 158 ~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~ 213 (272)
++.+|..|.||||+|+..|+.+++++|+++|+++ .|||++|+.. ..+.++.+++.
T Consensus 225 ~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 9999999999999999999999999999999998 5999999764 45555555554
No 54
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=9e-29 Score=189.94 Aligned_cols=152 Identities=18% Similarity=0.215 Sum_probs=100.0
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVEA 115 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~~~ 115 (272)
.++||.|+..|+.+.+++|++.+ .+++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------------- 63 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQE------NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-------------- 63 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHS------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--------------
T ss_pred cchHHHHHHCCCHHHHHHHHHcC------CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC--------------
Confidence 45566666666666666666665 5566666666666666666666666666666555542
Q ss_pred HHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc----
Q psy11714 116 VEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV---- 191 (272)
Q Consensus 116 ~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~---- 191 (272)
..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 64 --------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (167)
T 3v31_A 64 --------------------------------------------LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD 99 (167)
T ss_dssp --------------------------------------------CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC
T ss_pred --------------------------------------------CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCC
Confidence 33344555555555555555555555555444
Q ss_pred ---hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy11714 192 ---KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLP 266 (272)
Q Consensus 192 ---~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~ 266 (272)
.||||+|+..++.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++++++.
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPT---------------IETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 355666666667777777777777777 677888999999999999999999998887644
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.7e-28 Score=188.19 Aligned_cols=123 Identities=16% Similarity=0.179 Sum_probs=96.0
Q ss_pred hccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------h
Q psy11714 30 VALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------D 102 (272)
Q Consensus 30 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t 102 (272)
.......++|++|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|+++|++++ |
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 104 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEWG------ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGT 104 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 33455678999999999999999999997 9999999999999999999999999999999887763 5
Q ss_pred HHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHH
Q psy11714 103 ALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELIN 182 (272)
Q Consensus 103 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~ 182 (272)
|||+|+..++.+++++|+++|+++ +.+|..|.||||+|+..|+.++++
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~ga~~--------------------------------~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 105 PLLYAVRGNHVKCVEALLARGADL--------------------------------TTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCc--------------------------------cccCCCCCCHHHHHHHhCcHHHHH
Confidence 777777777777777777765443 355666677777776666666666
Q ss_pred HHHhCCCC
Q psy11714 183 ILLEYNIQ 190 (272)
Q Consensus 183 ~Ll~~g~~ 190 (272)
+|+++|++
T Consensus 153 ~L~~~~~~ 160 (172)
T 3v30_A 153 VIENHILK 160 (172)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665544
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.9e-27 Score=183.05 Aligned_cols=119 Identities=25% Similarity=0.289 Sum_probs=108.4
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHH
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DAL 104 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l 104 (272)
.....++|+.|+..|+.+++++|++.| ++++..|..|.||||+|+..|+.+++++|+++|++++ |||
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 117 (169)
T 2y1l_E 44 DASGWTPLHLAAFNGHLEIVEVLLKNG------ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPL 117 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 345678899999999999999999997 9999999999999999999999999999999999884 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
|+|+..++.+++++|+++|+++ +.+|..|.|||++|+..|+.+++++|
T Consensus 118 ~~A~~~~~~~~v~~Ll~~g~~~--------------------------------~~~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 118 HLAAMFGHLEIVEVLLKNGADV--------------------------------NAQDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCC--------------------------------CCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 9999999999999999987554 47788999999999999999999999
Q ss_pred HhCC
Q psy11714 185 LEYN 188 (272)
Q Consensus 185 l~~g 188 (272)
+++|
T Consensus 166 ~~~G 169 (169)
T 2y1l_E 166 QKLN 169 (169)
T ss_dssp HTC-
T ss_pred HHcC
Confidence 9876
No 57
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=2.6e-27 Score=186.92 Aligned_cols=153 Identities=22% Similarity=0.312 Sum_probs=139.2
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCC-Ch-------hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHH
Q psy11714 72 PLNRSSLIAAIENENIELINILLEYNI-QV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIF 143 (272)
Q Consensus 72 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l 143 (272)
.++.||||.|+..|+.+.++.|+..+. ++ .||||+|+..++.+++++|+++|+++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------- 65 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI----------------- 65 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------------
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------
Confidence 568899999999999999999999876 66 37999999999999999999987654
Q ss_pred HHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCc-------hhHHHHHHHcCCHHHHHHHHhcC-
Q psy11714 144 MMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILL-EYNIQV-------KDALLHAIKEEYVEAVEILLEWE- 214 (272)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll-~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g- 214 (272)
+.++..|.||||+|+..|+.+++++|+ ..++++ .||||+|+..++.+++++|+++|
T Consensus 66 ---------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 130 (201)
T 3hra_A 66 ---------------NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR 130 (201)
T ss_dssp ---------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC
T ss_pred ---------------CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 467889999999999999999999999 556565 59999999999999999999999
Q ss_pred ccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHCCCCCCCCCCC
Q psy11714 215 EKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN-----YEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~-----~~iv~~Ll~~ga~~~~~~~~ 271 (272)
++++ .++..|.||||+|+..+. .+++++|+++|++++.++..
T Consensus 131 ~~~~---------------~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~ 177 (201)
T 3hra_A 131 EDID---------------FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNS 177 (201)
T ss_dssp CCTT---------------CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcC---------------CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCC
Confidence 8888 788899999999999998 99999999999999998865
No 58
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.9e-28 Score=188.05 Aligned_cols=157 Identities=15% Similarity=0.086 Sum_probs=113.1
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVE 114 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~~ 114 (272)
..++|+.|+..|+.+.++.|++.+ +.+++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------- 66 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNT-----ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN------------- 66 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCT-----TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcC-----cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-------------
Confidence 456688888888888888888876 37778888888888888888777777777777766652
Q ss_pred HHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc---
Q psy11714 115 AVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--- 191 (272)
Q Consensus 115 ~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--- 191 (272)
.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 67 ---------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 101 (179)
T 3f6q_A 67 ---------------------------------------------VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAV 101 (179)
T ss_dssp ---------------------------------------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred ---------------------------------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 23334445555555555555555555555444
Q ss_pred ----hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy11714 192 ----KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPM 267 (272)
Q Consensus 192 ----~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~ 267 (272)
.||||+|+..++.+++++|+++|++++ .++..|.|||++|+..++.+++++|+++|++++.
T Consensus 102 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 102 NEHGNVPLHYACFWGQDQVAEDLVANGALVS---------------ICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS---------------BCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc---------------hhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 355555666667777777777887777 6788899999999999999999999999999987
Q ss_pred CC
Q psy11714 268 PH 269 (272)
Q Consensus 268 ~~ 269 (272)
.+
T Consensus 167 ~~ 168 (179)
T 3f6q_A 167 IP 168 (179)
T ss_dssp BC
T ss_pred CC
Confidence 54
No 59
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=6.2e-28 Score=184.16 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=111.3
Q ss_pred hhccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------
Q psy11714 29 EVALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK------- 101 (272)
Q Consensus 29 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 101 (272)
........++|+.|+. |+.++++.|++.| ++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 104 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLRG------ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGN 104 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 3444556789999999 9999999999997 9999999999999999999999999999999999884
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELI 181 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~ 181 (272)
||||+|+..++.+++++|+++|++. ++.++..|.||||+|+..|+.+++
T Consensus 105 t~L~~A~~~~~~~~v~~Ll~~g~~~-------------------------------~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 105 LPLHLAAKEGHLRVVEFLVKHTASN-------------------------------VGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCCC-------------------------------TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHccCCC-------------------------------CCCcCCCCCcHHHHHHHcCCHHHH
Confidence 7999999999999999999987542 357788999999999999999999
Q ss_pred HHHHhCCCC
Q psy11714 182 NILLEYNIQ 190 (272)
Q Consensus 182 ~~Ll~~g~~ 190 (272)
++|+++|+|
T Consensus 154 ~~Ll~~GAd 162 (162)
T 1ihb_A 154 SLMQANGAG 162 (162)
T ss_dssp HHHHHTC--
T ss_pred HHHHHhCCC
Confidence 999999986
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.3e-27 Score=183.14 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=111.4
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcC
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEE 111 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~ 111 (272)
.+...++|+.|+..|+.+.++.|++.+ +.+++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------- 69 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-----SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH---------- 69 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-----TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-----CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC----------
Confidence 355677889999999999999988866 37777888888888888888888888888887766652
Q ss_pred cHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc
Q psy11714 112 YVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV 191 (272)
Q Consensus 112 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~ 191 (272)
.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 70 ------------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 101 (165)
T 3twr_A 70 ------------------------------------------------AKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 101 (165)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ------------------------------------------------ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Confidence 33344555555555555555555555555544
Q ss_pred -------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy11714 192 -------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGA 263 (272)
Q Consensus 192 -------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga 263 (272)
.||||+|+..++.+++++|+++|++++ .++..|.||||+|+. ++.+++++|+++||
T Consensus 102 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 102 NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT---------------KKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------------ccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 256666666677777777778887777 778899999999876 89999999999987
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.8e-27 Score=179.11 Aligned_cols=143 Identities=22% Similarity=0.284 Sum_probs=96.7
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVEA 115 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~~~ 115 (272)
.++|+.|+..|+.+.+++|++.| .+++ .+..|.||||+|+..|+.+++++|+++|+++
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g------~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------------- 60 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANG------APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR--------------- 60 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHT------CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT---------------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcC------CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------
Confidence 45666777777777777777665 4444 3556666666666666666666666655544
Q ss_pred HHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc----
Q psy11714 116 VEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV---- 191 (272)
Q Consensus 116 ~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~---- 191 (272)
+.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 61 -------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 97 (153)
T 1awc_B 61 -------------------------------------------DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKD 97 (153)
T ss_dssp -------------------------------------------TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred -------------------------------------------CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCC
Confidence 233444555555555555555555555555554
Q ss_pred ---hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy11714 192 ---KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKIL 258 (272)
Q Consensus 192 ---~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~L 258 (272)
.||||+|+..++.+++++|+++|++++ .++..|.||||+|+..|+.+++++|
T Consensus 98 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 98 MLKMTALHWATEHNHQEVVELLIKYGADVH---------------TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---------------ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 356666666677777777777887777 6788899999999999999999987
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3e-27 Score=181.40 Aligned_cols=123 Identities=17% Similarity=0.165 Sum_probs=105.9
Q ss_pred hhccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------
Q psy11714 29 EVALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK------- 101 (272)
Q Consensus 29 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 101 (272)
........++|++|+..|+.++++.|++.| ++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 103 (167)
T 3v31_A 30 NHTDEEGFTPLMWAAAHGQIAVVEFLLQNG------ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 103 (167)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHcC------CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCC
Confidence 334455678999999999999999999997 9999999999999999999999999999999998884
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELI 181 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~ 181 (272)
||||+|+..++.+++++|+++|+++ +.+|..|.|||++|+..|+.+++
T Consensus 104 t~L~~A~~~~~~~~v~~Ll~~g~~~--------------------------------~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 104 TPLLYAVHGNHVKCVKMLLESGADP--------------------------------TIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC--------------------------------CCcCCCCCCHHHHHHHcCcHHHH
Confidence 6888888888888888888877544 46777888888888888888888
Q ss_pred HHHHhCCC
Q psy11714 182 NILLEYNI 189 (272)
Q Consensus 182 ~~Ll~~g~ 189 (272)
++|++++.
T Consensus 152 ~~L~~~~~ 159 (167)
T 3v31_A 152 QVIESHLL 159 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887654
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.8e-28 Score=199.32 Aligned_cols=151 Identities=14% Similarity=0.106 Sum_probs=110.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCChh------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHH
Q psy11714 72 PLNRSSLIAAIENENIELINILLEYNIQVK------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMM 145 (272)
Q Consensus 72 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~ 145 (272)
..|.||||.|+..++.++++.|+++|++++ ||||.|+..|+.+++++|+++|++
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------------------- 62 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDD-------------------- 62 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS--------------------
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCC--------------------
Confidence 468999999999999999999999999885 799999999999999999998754
Q ss_pred HHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCC
Q psy11714 146 LDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIH 218 (272)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 218 (272)
++.+|..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++
T Consensus 63 ------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 130 (239)
T 1ycs_B 63 ------------PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130 (239)
T ss_dssp ------------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 4577889999999999999999999999999988 599999999999999999999999998
Q ss_pred CCCCcchhhhhhcCCCCCCCCC-cHHHHH--HHcCCHHHHHHHHHCCCCCCCCC
Q psy11714 219 VHGQPYSWEAVDRSSSTFTPDI-TPLILA--AHMNNYEILKILLDRGATLPMPH 269 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~-t~l~~A--~~~~~~~iv~~Ll~~ga~~~~~~ 269 (272)
..+..|. ||||+| +..|+.+++++|+++|++++..+
T Consensus 131 ---------------~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 131 ---------------AMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN 169 (239)
T ss_dssp ---------------CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTG
T ss_pred ---------------eecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccc
Confidence 5666666 999999 78899999999999999988754
No 64
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.9e-27 Score=194.93 Aligned_cols=163 Identities=20% Similarity=0.155 Sum_probs=139.7
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHCCCChh-----------hHHHHHHHc---CcHHHHHHHHccccccccCCCCcc
Q psy11714 73 LNRSSLIAAIENENIE----LINILLEYNIQVK-----------DALLHAIKE---EYVEAVEILLEWEEKIHVHGQPYV 134 (272)
Q Consensus 73 ~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~-----------t~l~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~ 134 (272)
+|+||||.|+..|+.+ ++++|+++|++++ ||||+|+.. |+.+++++|+++|++++.....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~-- 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL-- 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG--
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh--
Confidence 5889999999999996 6677788887763 799999999 9999999999999887621000
Q ss_pred ccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc--------------------hhH
Q psy11714 135 SENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--------------------KDA 194 (272)
Q Consensus 135 ~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--------------------~t~ 194 (272)
.......+|..|.||||+|+..|+.+++++|+++|+++ .||
T Consensus 79 -------------------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tp 139 (256)
T 2etb_A 79 -------------------VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELP 139 (256)
T ss_dssp -------------------GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSH
T ss_pred -------------------cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCH
Confidence 00223345678999999999999999999999999885 389
Q ss_pred HHHHHHcCCHHHHHHHHh---cCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHHCC
Q psy11714 195 LLHAIKEEYVEAVEILLE---WEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAH--MNNYE-------ILKILLDRG 262 (272)
Q Consensus 195 l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~--~~~~~-------iv~~Ll~~g 262 (272)
||+|+..|+.+++++|++ +|++++ .+|..|.||||+|+. .++.+ ++++|+++|
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n---------------~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g 204 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLE---------------ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG 204 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTT---------------CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcC---------------ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC
Confidence 999999999999999999 999999 788999999999999 78888 999999999
Q ss_pred CCC-------CCCCCC
Q psy11714 263 ATL-------PMPHDV 271 (272)
Q Consensus 263 a~~-------~~~~~~ 271 (272)
+++ +..|..
T Consensus 205 a~~~~~~~~~~~~d~~ 220 (256)
T 2etb_A 205 ARLCPTVQLEEISNHQ 220 (256)
T ss_dssp HHHSTTCCGGGCCCTT
T ss_pred CCcccccccccccCCC
Confidence 999 777754
No 65
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=1e-26 Score=179.02 Aligned_cols=127 Identities=24% Similarity=0.343 Sum_probs=116.4
Q ss_pred ChhhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCH
Q psy11714 99 QVKDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENI 178 (272)
Q Consensus 99 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~ 178 (272)
++.++|+.|+..|+.++|++|+++|+++ +.+|..|.||||+|+..++.
T Consensus 3 dlg~~L~~Aa~~G~~~~v~~Ll~~Gadv--------------------------------n~~d~~g~t~l~~a~~~~~~ 50 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVKDLIENGADV--------------------------------NASDSDGRTPLHHAAENGHK 50 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHCCCCC--------------------------------CCcCCCCCCHHHHHHHcCCH
Confidence 3457899999999999999999987654 47788999999999999999
Q ss_pred HHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC
Q psy11714 179 ELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN 251 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 251 (272)
+++++|+++|+++ .||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+
T Consensus 51 ~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn---------------~~d~~G~TpLh~A~~~g~ 115 (169)
T 4gpm_A 51 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN---------------AKDSDGRTPLHHAAENGH 115 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC---------------CCCCCCCCHHHHHHHcCC
Confidence 9999999999988 599999999999999999999999999 788999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCC
Q psy11714 252 YEILKILLDRGATLPMPHDVR 272 (272)
Q Consensus 252 ~~iv~~Ll~~ga~~~~~~~~~ 272 (272)
.++|++|+++|++++.+|..+
T Consensus 116 ~~~v~~Ll~~gad~~~~d~~G 136 (169)
T 4gpm_A 116 KEVVKLLISKGADVNTSDSDG 136 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHHHcCCCccccCCCC
Confidence 999999999999999998653
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=9.7e-28 Score=198.60 Aligned_cols=167 Identities=20% Similarity=0.195 Sum_probs=137.3
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCh-----------hhHHHHHHHc---CcHHHHHHHHcccccc
Q psy11714 65 FNINCVDPLNRSSLIAAIENENIELINILLE----YNIQV-----------KDALLHAIKE---EYVEAVEILLEWEEKI 126 (272)
Q Consensus 65 ~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~-----------~t~l~~A~~~---~~~~~~~~Ll~~g~~~ 126 (272)
+..+..|..|.||||+|+..|+.++|+.|++ .+.++ .||||+|+.. |+.+++++|+++|++.
T Consensus 4 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred ccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 5667788999999999999999999988886 44443 4799999987 9999999999999875
Q ss_pred ccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc---------------
Q psy11714 127 HVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--------------- 191 (272)
Q Consensus 127 ~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--------------- 191 (272)
+. +...+ .......|..|.||||+|+..|+.+++++|+++|+++
T Consensus 84 ~~--------------~~~~i-------~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 142 (273)
T 2pnn_A 84 DS--------------LKQFV-------NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGR 142 (273)
T ss_dssp TC--------------HHHHH-------TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSS
T ss_pred cc--------------hhHHh-------hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccccccc
Confidence 31 00000 0233446778999999999999999999999999886
Q ss_pred ------hhHHHHHHHcCCHHHHHHHHh---cCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC---------HH
Q psy11714 192 ------KDALLHAIKEEYVEAVEILLE---WEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN---------YE 253 (272)
Q Consensus 192 ------~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~---------~~ 253 (272)
.||||+|+..|+.+++++|++ +|++++ .+|..|.||||+|+..++ .+
T Consensus 143 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~---------------~~d~~g~tpLh~A~~~~~~~~~~~~~~~~ 207 (273)
T 2pnn_A 143 PGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS---------------ARDSVGNTVLHALVEVADNTVDNTKFVTS 207 (273)
T ss_dssp CCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---------------CCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce---------------eeCCCCCcHHHHHHHccCcchhHHHHHHH
Confidence 289999999999999999999 999999 788999999999999988 89
Q ss_pred HHHHHHHCCCCCCC
Q psy11714 254 ILKILLDRGATLPM 267 (272)
Q Consensus 254 iv~~Ll~~ga~~~~ 267 (272)
++++|+++|++++.
T Consensus 208 ~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 208 MYNEILILGAKLHP 221 (273)
T ss_dssp HHHHHHHHHHHHCT
T ss_pred HHHHHHHhhhhccc
Confidence 99999999999974
No 67
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=6.9e-27 Score=183.49 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=135.4
Q ss_pred ccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hH
Q psy11714 31 ALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DA 103 (272)
Q Consensus 31 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~ 103 (272)
....+.++|++|+..|+.+++++|++.+ .+++.++..|.||||+|+..|+.+++++|+++|++++ ||
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 104 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENF------DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTP 104 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHH------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhc------cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Confidence 3455678899999999999999999997 8999999999999999999999999999999999883 79
Q ss_pred HHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHH
Q psy11714 104 LLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINI 183 (272)
Q Consensus 104 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~ 183 (272)
||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGAN--------------------------------VNDRNLEGETPLIVASKYGRSEIVKK 152 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC--------------------------------SSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCC--------------------------------CCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999999998755 44778899999999999999999999
Q ss_pred HHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcC
Q psy11714 184 LLEYNIQV-------KDALLHAIKEEYVEAVEILLEWE 214 (272)
Q Consensus 184 Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g 214 (272)
|+++|+++ .|||++|+..++.+++++|+++|
T Consensus 153 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 153 LLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999998 49999999999999999999875
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=6.5e-27 Score=181.68 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=102.8
Q ss_pred hhccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------
Q psy11714 29 EVALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK------- 101 (272)
Q Consensus 29 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 101 (272)
........++|+.|+..|+.++++.|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 106 (179)
T 3f6q_A 33 NQGDDHGFSPLHWACREGRSAVVEMLIMRG------ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGN 106 (179)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cccCCCCCCHHHHHHHcCcHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 334455678999999999999999999997 9999999999999999999999999999999998873
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELI 181 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~ 181 (272)
||||+|+..++.+++++|+++|+++ +.+|..|.|||++|+..++.+++
T Consensus 107 t~L~~A~~~~~~~~v~~Ll~~ga~~--------------------------------~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 107 VPLHYACFWGQDQVAEDLVANGALV--------------------------------SICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCS--------------------------------SBCCTTSCCGGGGSCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCc--------------------------------chhccCCCCcHHHHHHHHHHHHH
Confidence 6888888888888888888876443 46677777888877777777777
Q ss_pred HHHHhCCCCc
Q psy11714 182 NILLEYNIQV 191 (272)
Q Consensus 182 ~~Ll~~g~~~ 191 (272)
++|+++|+++
T Consensus 155 ~~L~~~g~~~ 164 (179)
T 3f6q_A 155 ERAEKMGQNL 164 (179)
T ss_dssp HHHHHTTCCC
T ss_pred HHHHHhhcCc
Confidence 7777777665
No 69
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=4.4e-29 Score=215.36 Aligned_cols=196 Identities=15% Similarity=0.113 Sum_probs=148.0
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----h----hhHHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQ-----V----KDALL 105 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~----~t~l~ 105 (272)
..++||.|+..|+.+++++|++.|.. ....+..+..|.||||+|+..|+.++|++|+++|++ + .||||
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~---~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh 168 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTS---DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 168 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--C---CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCc---HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHH
Confidence 34789999999999999999988610 001223344677899999999999999999999975 2 37999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHH-HcCCHHHHHHH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAI-ENENIELINIL 184 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~-~~g~~~~~~~L 184 (272)
+|+..|+.+++++|+++|++++ .+.+|..|.||||+|+ ..|+.+++++|
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~------------------------------~~~~d~~g~TpL~~Aa~~~G~~eiv~~L 218 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEA------------------------------TAMIQAENYYAFRWAAVGRGHHNVINFL 218 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGH------------------------------HHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCccc------------------------------hhccCCCCCCHHHHHHHHCCCHHHHHHH
Confidence 9999999999999999887654 0014556789999999 99999999999
Q ss_pred HhCCCCchhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhh-----------------------------------
Q psy11714 185 LEYNIQVKDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAV----------------------------------- 229 (272)
Q Consensus 185 l~~g~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~----------------------------------- 229 (272)
++.|++..|||++|+..|+.+++++|+++|++++....++.+++.
T Consensus 219 l~~ga~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~ 298 (376)
T 2aja_A 219 LDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIR 298 (376)
T ss_dssp TTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHH
T ss_pred HhCCCccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHH
Confidence 998888889999999999999999999998877432221211110
Q ss_pred ---h--------cCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy11714 230 ---D--------RSSSTFTPDITPLILAAHMNNYEILKILLDRGA 263 (272)
Q Consensus 230 ---~--------~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga 263 (272)
. ........+.||||+|+..|+.+++++|+++|+
T Consensus 299 ~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 299 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp HHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred HHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChH
Confidence 0 011233456799999999999999999999865
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=5.7e-26 Score=172.21 Aligned_cols=146 Identities=19% Similarity=0.298 Sum_probs=105.4
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAI 108 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~ 108 (272)
.++|+.|+..|+.+.++.|++.. +.+++..+..|.||||+ +..|+.+++++|+++|++++ ||||+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRE-----LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTT-----CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhh-----CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 46789999999999999999884 37888888889899888 88888888888888777663 4555555
Q ss_pred HcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Q psy11714 109 KEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYN 188 (272)
Q Consensus 109 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g 188 (272)
..|+.+++++|+++|+++ +.+|..|.|
T Consensus 77 ~~~~~~~v~~Ll~~g~~~--------------------------------~~~~~~g~t--------------------- 103 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGADV--------------------------------NVPDGTGAL--------------------- 103 (156)
T ss_dssp HTTCHHHHHHHHHTTCCS--------------------------------CCCCTTSCC---------------------
T ss_pred HcCcHHHHHHHHHcCCCC--------------------------------CCcCCCCCc---------------------
Confidence 555555555555544332 234444455
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy11714 189 IQVKDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDR 261 (272)
Q Consensus 189 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ 261 (272)
|||+|+..|+.+++++|+++ ++++ .++..|.||||+|+..|+.+++++|+++
T Consensus 104 -----~L~~A~~~~~~~~v~~Ll~~-~~~~---------------~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 104 -----PIHLAVQEGHTAVVSFLAAE-SDLH---------------RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -----HHHHHHHHTCHHHHHHHHTT-SCTT---------------CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -----HHHHHHHhChHHHHHHHHhc-cCCC---------------CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 45555555566666666666 6666 6778899999999999999999999875
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=7e-26 Score=171.32 Aligned_cols=115 Identities=21% Similarity=0.297 Sum_probs=105.3
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHH
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DAL 104 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l 104 (272)
.....++|+.|+..|+.++++.|++.| ++++.++..|.||||+|+..|+.+++++|+++|++++ |||
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 104 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAG------VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTAL 104 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTT------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 344678999999999999999999987 9999999999999999999999999999999999984 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
|+|+..++.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~--------------------------------~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADV--------------------------------HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCc--------------------------------cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999987554 47788999999999999999999987
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=8.3e-27 Score=191.48 Aligned_cols=160 Identities=20% Similarity=0.171 Sum_probs=136.0
Q ss_pred CCCCCcHHHHHHHcCCHHH----HHHHHHCCCChh-----------hHHHHHH---HcCcHHHHHHHHccccccccCCCC
Q psy11714 71 DPLNRSSLIAAIENENIEL----INILLEYNIQVK-----------DALLHAI---KEEYVEAVEILLEWEEKIHVHGQP 132 (272)
Q Consensus 71 ~~~g~t~L~~A~~~~~~~~----v~~Ll~~g~~~~-----------t~l~~A~---~~~~~~~~~~Ll~~g~~~~~~~~~ 132 (272)
+.+++|+||.|+..|+.+. +++|++.|++++ ||||+|+ ..|+.+++++|+++|++....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~--- 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM--- 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH---
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch---
Confidence 4678999999999999995 555555888774 7999999 679999999999998775410
Q ss_pred ccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc---------------------
Q psy11714 133 YVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--------------------- 191 (272)
Q Consensus 133 ~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--------------------- 191 (272)
..+ ...+++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 79 --------~~~----------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 79 --------REF----------INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp --------HHH----------HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSC
T ss_pred --------Hhh----------hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCC
Confidence 000 01345666779999999999999999999999999886
Q ss_pred hhHHHHHHHcCCHHHHHHHHh---cCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC---------HHHHHHHH
Q psy11714 192 KDALLHAIKEEYVEAVEILLE---WEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN---------YEILKILL 259 (272)
Q Consensus 192 ~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~---------~~iv~~Ll 259 (272)
.||||+|+..|+.+++++|++ +|++++ .+|..|.||||+|+..++ .+++++|+
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~---------------~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll 205 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADLR---------------RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLL 205 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---------------CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCCc---------------ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 289999999999999999999 999999 788999999999998887 79999999
Q ss_pred HCCCCCC
Q psy11714 260 DRGATLP 266 (272)
Q Consensus 260 ~~ga~~~ 266 (272)
++|++++
T Consensus 206 ~~ga~~~ 212 (260)
T 3jxi_A 206 IKCAKLF 212 (260)
T ss_dssp HHHHHHC
T ss_pred HhCcccc
Confidence 9999983
No 73
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=1.6e-26 Score=196.45 Aligned_cols=180 Identities=14% Similarity=0.164 Sum_probs=135.9
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCC---HHHHHHHHHCC-CCh-------
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENEN---IELINILLEYN-IQV------- 100 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~g-~~~------- 100 (272)
...+.++||+|+..|+.++++.||+.| +++|.+|..|.||||+|+..|+ .++++.|++++ +++
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~G------ad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g 201 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHG------SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCC
Confidence 355678899999999999999999997 9999999999999999999998 67788888876 445
Q ss_pred hhHHHHHHH----cCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcC
Q psy11714 101 KDALLHAIK----EEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENE 176 (272)
Q Consensus 101 ~t~l~~A~~----~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g 176 (272)
.||||+|+. .++.+++++|++.++.+... ..+.. +.......+.+++.++..|.||||+|+.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~-------~~~~~-----i~~~~~~~g~~~~~~~~~g~t~L~~a~~-- 267 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVK-------KQNRP-----IQSGTNEKESKPNDKNGERKDSILENLD-- 267 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH-------GGGCC-----EEEC----------------CHHHHHCS--
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhc-------ccchH-----HHhhhhcccCCcccccccCCChhHHHHH--
Confidence 489999999 89999999999987544310 00000 0001122357888999999999999985
Q ss_pred CHHHHHHHHhCCCCc-----hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcC
Q psy11714 177 NIELINILLEYNIQV-----KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMN 250 (272)
Q Consensus 177 ~~~~~~~Ll~~g~~~-----~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~ 250 (272)
+++|++++.+. +||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+++|
T Consensus 268 ----~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~---------------~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 ----LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF---------------IANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ----HHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT---------------CCCTTSCCGGGGTCC--
T ss_pred ----HHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------------ccCCCCCCHHHHHHhcC
Confidence 89999887665 699999999999999999999999999 78999999999998764
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.9e-29 Score=202.87 Aligned_cols=172 Identities=15% Similarity=0.074 Sum_probs=142.2
Q ss_pred hhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHH
Q psy11714 34 PQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLH 106 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~ 106 (272)
...++|+.|+..|+.++++.|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++ ||||+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~ 93 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEM------NDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHC 93 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHS------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 3456799999999999999999987 8999999999999999999999999999999999884 79999
Q ss_pred HHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCC-CCCCCHHHHH--HHcCCHHHHHH
Q psy11714 107 AIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVD-PLNRSSLIAA--IENENIELINI 183 (272)
Q Consensus 107 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d-~~~~t~L~~a--~~~g~~~~~~~ 183 (272)
|+..|+.+++++|+++|++++ .++ ..|.||||+| +..|+.+++++
T Consensus 94 A~~~g~~~~v~~Ll~~ga~~~--------------------------------~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 94 AASCNDTVICMALVQHGAAIF--------------------------------ATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp HHHTTCHHHHHHHHTTTCCTT--------------------------------CCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCcc--------------------------------cccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 999999999999999886654 444 5889999999 88999999999
Q ss_pred HHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy11714 184 LLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILK 256 (272)
Q Consensus 184 Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~ 256 (272)
|+++|+++ .++++.++... ..++|++.|++++. +.+|..|.||||+|+..|+.++|+
T Consensus 142 Ll~~ga~~~~~~~~~~~~l~~~~~~~---~~~~ll~~ga~~~~-------------~~~d~~G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 142 LADVEQSMGLMNSGAVYALWDYSAEF---GDELSFREGESVTV-------------LRRDGPEETDWWWAALHGQEGYVP 205 (229)
T ss_dssp HHHHHHHTTTSGGGEEEESSCBCCSS---TTBCCBCTTCEEEE-------------EESSCTTCSSEEEEEETTEEEEEE
T ss_pred HHHcCCCcccccCCchHHHHHHhhcc---ccccCccccccccc-------------cccCCCcccHHHHHHHcCCcceee
Confidence 99998887 25555433333 22567788887431 167889999999999999998887
Q ss_pred HHH
Q psy11714 257 ILL 259 (272)
Q Consensus 257 ~Ll 259 (272)
.++
T Consensus 206 ~~~ 208 (229)
T 2vge_A 206 RNY 208 (229)
T ss_dssp GGG
T ss_pred hhh
Confidence 543
No 75
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1.5e-25 Score=166.16 Aligned_cols=127 Identities=16% Similarity=0.196 Sum_probs=101.0
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCcccc
Q psy11714 64 VFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSE 136 (272)
Q Consensus 64 ~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~ 136 (272)
+.+++..+..|.||||+|+..|+.+++++|+++|++++ ||||+|+. ++.+++++|+++|++++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~--------- 71 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN--------- 71 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS---------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC---------
Confidence 47889999999999999999999999999999988873 67888877 88888888887765443
Q ss_pred CCcccHHHHHHhcCCCCccccccCCCCC-CCCHHHHHHHcCCHHHHHHHHhCCCCchhHHHHHHHcCCHHHHHHHHhcCc
Q psy11714 137 NKGRTIFMMLDELKDQPEVFNINCVDPL-NRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVEAVEILLEWEE 215 (272)
Q Consensus 137 ~~~~t~l~~~~~~~~~~~~~~~~~~d~~-~~t~L~~a~~~g~~~~~~~Ll~~g~~~~t~l~~A~~~~~~~~~~~Ll~~g~ 215 (272)
.+|.. |.||||+|+..| +.+++++|+++|+
T Consensus 72 -----------------------~~~~~~g~t~L~~A~~~~--------------------------~~~~v~~Ll~~ga 102 (136)
T 1d9s_A 72 -----------------------CADPATLTRPVHDAAREG--------------------------FLDTLVVLHRAGA 102 (136)
T ss_dssp -----------------------CCBTTTTBCHHHHHHHHT--------------------------CHHHHHHHHHTCC
T ss_pred -----------------------CcCCCCCCCHHHHHHHcC--------------------------CHHHHHHHHHcCC
Confidence 55555 666666666555 5555556666666
Q ss_pred cCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy11714 216 KIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGAT 264 (272)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~ 264 (272)
+++ .++..|.||||+|+..++.+++++|+++|||
T Consensus 103 ~~~---------------~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 103 RLD---------------VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCC---------------CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCC---------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 666 6678899999999999999999999999986
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.9e-26 Score=187.42 Aligned_cols=181 Identities=15% Similarity=0.137 Sum_probs=123.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHA 107 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A 107 (272)
..++|+.|+..|+.+.++.|++.| ++++.. ..|.||||.|+..|+.+++++|+++|++++ ||||+|
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g------~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHG------MRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHH
T ss_pred ccccCchhhhhhhHHHHHHHhccC------CCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 567799999999999999999997 888754 788999999999999999999999999884 899999
Q ss_pred HHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy11714 108 IKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEY 187 (272)
Q Consensus 108 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~ 187 (272)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~--------------------------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 125 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVN--------------------------------VNAADSDGWTPLHCAASCNNVQVCKFLVES 125 (239)
T ss_dssp HHHTCHHHHHHHHHHTCC--------------------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCC--------------------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999998755 457888999999999999999999999999
Q ss_pred CCCc--------hhHHHHH--HHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy11714 188 NIQV--------KDALLHA--IKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKI 257 (272)
Q Consensus 188 g~~~--------~t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~ 257 (272)
|+++ .||||+| +..|+.+++++|+++|++++....... .-..+..+.+++++++..|. ++++
T Consensus 126 ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~------~al~d~~~~~~~eLa~~~G~--~i~v 197 (239)
T 1ycs_B 126 GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVI------YALWDYEPQNDDELPMKEGD--CMTI 197 (239)
T ss_dssp TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEE------EESSCBCCSSTTBCCBCSSC--EEEE
T ss_pred CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceE------EEEeccCCCCCCcccccCCC--EEEE
Confidence 9998 2999999 788999999999999999874211110 11235667888888777664 4444
Q ss_pred HHHCC
Q psy11714 258 LLDRG 262 (272)
Q Consensus 258 Ll~~g 262 (272)
|.+.+
T Consensus 198 l~~~~ 202 (239)
T 1ycs_B 198 IHRED 202 (239)
T ss_dssp CCCCT
T ss_pred EEecC
Confidence 44443
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1e-25 Score=176.09 Aligned_cols=158 Identities=13% Similarity=0.116 Sum_probs=113.2
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVD-PLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYV 113 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~ 113 (272)
..+.|+.|+..|+.+.++.++..+ ++.++ ..|+||||+|+..++.+. +.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~--------~~~~~~~~g~T~Lh~A~~~~~~~~----------------------~~ 55 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG--------YEDKESVLKSNILYDVLRNNNDEA----------------------RY 55 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS--------SSCHHHHHTTTHHHHHTTCSCHHH----------------------HH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC--------cccccccCCCCHHHHHHHcCCcch----------------------HH
Confidence 345566677777777766666554 22333 456666666666554321 13
Q ss_pred HHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCC------HHHHHHHHhC
Q psy11714 114 EAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENEN------IELINILLEY 187 (272)
Q Consensus 114 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~------~~~~~~Ll~~ 187 (272)
+++++|+++|+++ +.+|..|+||||+|+..|+ .+++++|+++
T Consensus 56 ~iv~~Ll~~Gadv--------------------------------n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~ 103 (186)
T 3t8k_A 56 KISMFLINKGADI--------------------------------KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK 103 (186)
T ss_dssp HHHHHHHHTTCCS--------------------------------SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCC--------------------------------CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC
Confidence 4666666665443 3566777777777777765 5678888888
Q ss_pred CCCc-------h-hHHHHHHHc-----CCHHHHHHHHh-cCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 188 NIQV-------K-DALLHAIKE-----EYVEAVEILLE-WEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 188 g~~~-------~-t~l~~A~~~-----~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
|+++ . ||||+|+.. +..+++++|++ +|++++ .+|..|.||||+|+..++.+
T Consensus 104 Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~---------------~~d~~G~TpL~~A~~~~~~~ 168 (186)
T 3t8k_A 104 GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL---------------IKDKWGLTALEFVKRCQKPI 168 (186)
T ss_dssp TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT---------------CCCTTSCCHHHHHHTTTCHH
T ss_pred CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc---------------ccCCCCCCHHHHHHHcCCHH
Confidence 8877 4 788888773 34578999999 999999 88999999999999999999
Q ss_pred HHHHHHHCCCCCCCCC
Q psy11714 254 ILKILLDRGATLPMPH 269 (272)
Q Consensus 254 iv~~Ll~~ga~~~~~~ 269 (272)
+|++|.+...+++.++
T Consensus 169 ~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 169 ALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999998877766664
No 78
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=1.2e-24 Score=180.62 Aligned_cols=148 Identities=20% Similarity=0.279 Sum_probs=133.9
Q ss_pred hccChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHH-----HcCCHHHHHHHHHCCCCh----
Q psy11714 30 VALTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAI-----ENENIELINILLEYNIQV---- 100 (272)
Q Consensus 30 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~---- 100 (272)
.....+.++||+|+..|+.++++.|++.| ..+++..+..|.||||+|+ ..++.+++++|++.|.++
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~ 180 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDSG-----VCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS 180 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTS-----CCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC
Confidence 33456778899999999999999999998 2499999999999999999 568899999999999776
Q ss_pred ---hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCC
Q psy11714 101 ---KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENEN 177 (272)
Q Consensus 101 ---~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~ 177 (272)
.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~--------------------------------n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEADV--------------------------------NVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHHTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCC--------------------------------CCCCCCCCCHHHHHHHCCC
Confidence 38999999999999999999987654 4778899999999999999
Q ss_pred HHHHHHHHh-CCCCc-------hhHHHHHHHcCCHHHHHHHHhcC
Q psy11714 178 IELINILLE-YNIQV-------KDALLHAIKEEYVEAVEILLEWE 214 (272)
Q Consensus 178 ~~~~~~Ll~-~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g 214 (272)
.+++++|++ .|+++ .|||++|+..|+.+++++|++++
T Consensus 229 ~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999 89988 59999999999999999999875
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=3.1e-25 Score=168.42 Aligned_cols=97 Identities=11% Similarity=0.159 Sum_probs=77.1
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hh-HHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhh
Q psy11714 159 NCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KD-ALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVD 230 (272)
Q Consensus 159 ~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t-~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 230 (272)
+.+|..|.||||+|+ .|+.+++++|+++|+++ .| |||+|+..++.+++++|+++|++++
T Consensus 39 ~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~------------ 105 (156)
T 1bi7_B 39 NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD------------ 105 (156)
T ss_dssp TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS------------
T ss_pred CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc------------
Confidence 355677888888875 88888999999888887 35 9999999999999999999999998
Q ss_pred cCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 231 RSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 231 ~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
.++..|.||||+|+..++.+++++|+++|++++.++..
T Consensus 106 ---~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 143 (156)
T 1bi7_B 106 ---VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHA 143 (156)
T ss_dssp ---CCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------
T ss_pred ---ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcC
Confidence 77888999999999999999999999999999888754
No 80
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=6.9e-24 Score=157.20 Aligned_cols=115 Identities=21% Similarity=0.235 Sum_probs=103.7
Q ss_pred hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 101 KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 101 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.++
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~ 62 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGAD--------------------------------VNAKDEYGLTPLYLATAHGHLEI 62 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCC--------------------------------CCCcCCCCCCHHHHHHHcCCHHH
Confidence 4788888888888888888887654 44677889999999999999999
Q ss_pred HHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 181 INILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 181 ~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.||||+|+..++.+
T Consensus 63 v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 63 VEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN---------------AQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------------CcCCCCCCHHHHHHHCCCHH
Confidence 99999999887 599999999999999999999999998 78889999999999999999
Q ss_pred HHHHHHHCC
Q psy11714 254 ILKILLDRG 262 (272)
Q Consensus 254 iv~~Ll~~g 262 (272)
++++|+++|
T Consensus 128 ~~~~Ll~~G 136 (136)
T 2jab_A 128 LAEILQKLN 136 (136)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHcC
Confidence 999999987
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.1e-23 Score=153.40 Aligned_cols=116 Identities=32% Similarity=0.428 Sum_probs=101.2
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELI 181 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~ 181 (272)
||||+|+..++.+++++|+++|++ ++..+..|.||||+|+..|+.+++
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~~~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~~ 51 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEAGAD--------------------------------VNAKDKNGRTPLHLAARNGHLEVV 51 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC--------------------------------TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCC--------------------------------CCCcCCCCCcHHHHHHHcCcHHHH
Confidence 567777777777777777776544 335677899999999999999999
Q ss_pred HHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHH
Q psy11714 182 NILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEI 254 (272)
Q Consensus 182 ~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i 254 (272)
++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.|||++|+..++.++
T Consensus 52 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~---------------~~~~~g~t~l~~A~~~~~~~~ 116 (126)
T 1n0r_A 52 KLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN---------------AKDKNGRTPLHLAARNGHLEV 116 (126)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc---------------ccCCCCCCHHHHHHHcCcHHH
Confidence 9999999887 589999999999999999999999998 778899999999999999999
Q ss_pred HHHHHHCCCC
Q psy11714 255 LKILLDRGAT 264 (272)
Q Consensus 255 v~~Ll~~ga~ 264 (272)
+++|+++|||
T Consensus 117 ~~~Ll~~Gad 126 (126)
T 1n0r_A 117 VKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHcCCC
Confidence 9999999996
No 82
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=7.3e-26 Score=195.23 Aligned_cols=165 Identities=12% Similarity=-0.005 Sum_probs=136.2
Q ss_pred HHHHHHH-cCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC------Ch----hhHHHH
Q psy11714 38 RFLLVAE-RGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNI------QV----KDALLH 106 (272)
Q Consensus 38 ~l~~a~~-~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~----~t~l~~ 106 (272)
.++++.. .++.+.++++++.+ . .+.||||+|+..|+.++|++|+++|+ ++ .||||+
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g------~-------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~ 134 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKG------I-------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL 134 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHT------C-------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcC------C-------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHH
Confidence 4555555 57888888888876 3 34599999999999999999999998 43 379999
Q ss_pred HHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11714 107 AIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLE 186 (272)
Q Consensus 107 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~ 186 (272)
|+..|+.+++++|+++|++++. .+++..+ .||||+|+..|+.+++++|++
T Consensus 135 Aa~~G~~eiv~~Ll~~gad~~~---------------------------~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~ 184 (376)
T 2aja_A 135 AAENGHLHVLNRLCELAPTEIM---------------------------AMIQAEN---YHAFRLAAENGHLHVLNRLCE 184 (376)
T ss_dssp HHHTTCHHHHHHHHHSCTTTHH---------------------------HHHSHHH---HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCccc---------------------------cccCCCC---CCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999865320 1122222 899999999999999999999
Q ss_pred CCCCc---------hhHHHHHH-HcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy11714 187 YNIQV---------KDALLHAI-KEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILK 256 (272)
Q Consensus 187 ~g~~~---------~t~l~~A~-~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~ 256 (272)
+|+++ .||||+|+ ..|+.+++++|+++|++ |.||||+|+.+|+.++++
T Consensus 185 ~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----------------------~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 185 LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----------------------LAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----------------------HHHHHHCTTTTTTTTHHH
T ss_pred cCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----------------------cchHHHHHHHCCCHHHHH
Confidence 99993 59999999 99999999999997732 689999999999999999
Q ss_pred HHHHCCCCCCC
Q psy11714 257 ILLDRGATLPM 267 (272)
Q Consensus 257 ~Ll~~ga~~~~ 267 (272)
+|+++|++++.
T Consensus 243 lL~~~ga~~~~ 253 (376)
T 2aja_A 243 FIARHVNRLKE 253 (376)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHhcCccccc
Confidence 99999987653
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=6.6e-25 Score=177.24 Aligned_cols=164 Identities=14% Similarity=0.101 Sum_probs=119.5
Q ss_pred HHHHHHccCCCCCCCCcccC---CCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHH
Q psy11714 51 VRKMLDELKDQPEVFNINCV---DPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILL 120 (272)
Q Consensus 51 ~~~ll~~~~~~~~~~~~n~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll 120 (272)
++.||+++ .+++.. +.+|.||||+|+..|+.+++++|+++|++++ ||||+|+..|+.+++++|+
T Consensus 1 v~~ll~~~------~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKA------GSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp ---------------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CeehhccC------CCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 35667776 555444 3455678888999999999999998888886 6888888888888888888
Q ss_pred ccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc--------h
Q psy11714 121 EWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--------K 192 (272)
Q Consensus 121 ~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--------~ 192 (272)
++|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ .
T Consensus 75 ~~ga~~--------------------------------n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~ 122 (229)
T 2vge_A 75 TAGANV--------------------------------NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGA 122 (229)
T ss_dssp HTTCCT--------------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTC
T ss_pred HCCCCC--------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCC
Confidence 876544 466778888888888888888888888888877 3
Q ss_pred hHHHHH--HHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--CCCC
Q psy11714 193 DALLHA--IKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGAT--LPMP 268 (272)
Q Consensus 193 t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~--~~~~ 268 (272)
||||+| +..++.+++++|+++|++++ ..+..|.||++.++... .+++|+++|++ ++.+
T Consensus 123 tpL~~A~a~~~~~~~~v~~Ll~~ga~~~---------------~~~~~~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~ 184 (229)
T 2vge_A 123 TAFEKCDPYREGYADCATYLADVEQSMG---------------LMNSGAVYALWDYSAEF---GDELSFREGESVTVLRR 184 (229)
T ss_dssp CTGGGCCTTSTTHHHHHHHHHHHHHHTT---------------TSGGGEEEESSCBCCSS---TTBCCBCTTCEEEEEES
T ss_pred CHHHHHHHHhcChHHHHHHHHHcCCCcc---------------cccCCchHHHHHHhhcc---ccccCcccccccccccc
Confidence 788888 88888888888888888887 56677788887554433 33677788887 4555
Q ss_pred CC
Q psy11714 269 HD 270 (272)
Q Consensus 269 ~~ 270 (272)
|.
T Consensus 185 d~ 186 (229)
T 2vge_A 185 DG 186 (229)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 84
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=5.1e-23 Score=157.37 Aligned_cols=125 Identities=26% Similarity=0.248 Sum_probs=114.0
Q ss_pred hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 101 KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 101 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
.|||+.|+..|+.++++.|++.+. .+++..+..|.||||+|+..|+.++
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~-------------------------------~~~~~~~~~g~t~L~~A~~~~~~~~ 57 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQS-------------------------------VNCRDIEGRQSTPLHFAAGYNRVSV 57 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTT-------------------------------TTCCCTTTTCCCHHHHHHHTTCHHH
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCC-------------------------------CCccccccCCCCHHHHHHHcChHHH
Confidence 578999999999999999988431 3456778889999999999999999
Q ss_pred HHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 181 INILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 181 ~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.||||+|+..++.+
T Consensus 58 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~L~~A~~~~~~~ 122 (165)
T 3twr_A 58 VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN---------------VADLWKFTPLHEAAAKGKYE 122 (165)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC---------------CcCCCCCCHHHHHHHcCCHH
Confidence 99999999988 499999999999999999999999998 77889999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCC
Q psy11714 254 ILKILLDRGATLPMPHDV 271 (272)
Q Consensus 254 iv~~Ll~~ga~~~~~~~~ 271 (272)
++++|+++|++++..+..
T Consensus 123 ~v~~Ll~~ga~~~~~~~~ 140 (165)
T 3twr_A 123 ICKLLLQHGADPTKKNRD 140 (165)
T ss_dssp HHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCCCcccCCC
Confidence 999999999999998865
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=2.7e-24 Score=163.19 Aligned_cols=129 Identities=14% Similarity=0.091 Sum_probs=77.6
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCccc
Q psy11714 69 CVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRT 141 (272)
Q Consensus 69 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t 141 (272)
..+..|.||||+|+..|+.+++++|+++|++++ ||||+|+ .++.+++++|+++|+++
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~--------------- 70 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP--------------- 70 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC---------------
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC---------------
Confidence 345566677777777777777777777766663 5677663 66777777777765443
Q ss_pred HHHHHHhcCCCCccccccCCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhc
Q psy11714 142 IFMMLDELKDQPEVFNINCVDPLNRS-SLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEW 213 (272)
Q Consensus 142 ~l~~~~~~~~~~~~~~~~~~d~~~~t-~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~ 213 (272)
+.+|..|.| |||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++
T Consensus 71 -----------------~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ 133 (156)
T 1bi7_B 71 -----------------NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 133 (156)
T ss_dssp -----------------CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred -----------------CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc
Confidence 355666776 777777777777777777777766 3777777777778888888888
Q ss_pred CccCCCCCCcchhhhhhcCCCCCCCCCcHHHH
Q psy11714 214 EEKIHVHGQPYSWEAVDRSSSTFTPDITPLIL 245 (272)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~ 245 (272)
|++++ .++..|.||.+-
T Consensus 134 ga~~~---------------~~~~~g~t~~~~ 150 (156)
T 1bi7_B 134 AGGTR---------------GSNHARIDAAEG 150 (156)
T ss_dssp C-------------------------------
T ss_pred CCCCC---------------ccCcCcCccccc
Confidence 87777 566667776653
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=4.9e-23 Score=152.58 Aligned_cols=119 Identities=24% Similarity=0.325 Sum_probs=109.2
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHH
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DAL 104 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l 104 (272)
.....++|++|+..|+.++++.|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++ |||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 84 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG------ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPL 84 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHH
Confidence 345678899999999999999999997 9999999999999999999999999999999999984 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
|+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHGAD--------------------------------VNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC--------------------------------CcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 999999999999999998755 447788999999999999999999999
Q ss_pred HhCC
Q psy11714 185 LEYN 188 (272)
Q Consensus 185 l~~g 188 (272)
+++|
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 9986
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.1e-23 Score=156.03 Aligned_cols=120 Identities=16% Similarity=0.232 Sum_probs=110.6
Q ss_pred cChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCh--------hhH
Q psy11714 32 LTPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV--------KDA 103 (272)
Q Consensus 32 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~t~ 103 (272)
.....++|+.|+..|+.+++++|++.+ ++++.+|..|.||||+|+. ++.+++++|+++|+++ .||
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAG------ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcC------CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 345677899999999999999999997 9999999999999999999 9999999999999887 379
Q ss_pred HHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHH
Q psy11714 104 LLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINI 183 (272)
Q Consensus 104 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~ 183 (272)
||+|+..++.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~--------------------------------~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARL--------------------------------DVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCC--------------------------------CCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC--------------------------------CccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999987554 4778899999999999999999999
Q ss_pred HHhCCCC
Q psy11714 184 LLEYNIQ 190 (272)
Q Consensus 184 Ll~~g~~ 190 (272)
|+++|+|
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9999986
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.8e-22 Score=146.89 Aligned_cols=118 Identities=28% Similarity=0.386 Sum_probs=107.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHH
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHA 107 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A 107 (272)
+.++|+.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|+++|++++ ||||+|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcC------CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHH
Confidence 356799999999999999999997 8999999999999999999999999999999998883 799999
Q ss_pred HHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy11714 108 IKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEY 187 (272)
Q Consensus 108 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~ 187 (272)
+..++.+++++|+++|++ ++.+|..|.|||++|+..|+.+++++|+++
T Consensus 76 ~~~~~~~~~~~Ll~~g~~--------------------------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 76 ARNGHLEVVKLLLEAGAD--------------------------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp HHTTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHcCCC--------------------------------CcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 999999999999998755 447788899999999999999999999999
Q ss_pred CCC
Q psy11714 188 NIQ 190 (272)
Q Consensus 188 g~~ 190 (272)
|+|
T Consensus 124 Gad 126 (126)
T 1n0r_A 124 GAY 126 (126)
T ss_dssp TCC
T ss_pred CCC
Confidence 986
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=6.5e-24 Score=165.86 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=49.2
Q ss_pred hhhhHHHHHHHcCCH----HHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCH------HHHHHHHHCCCChh
Q psy11714 34 PQEKRFLLVAERGDC----ATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENI------ELINILLEYNIQVK 101 (272)
Q Consensus 34 ~~~~~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~------~~v~~Ll~~g~~~~ 101 (272)
.+.++||+|+..|+. ++++.||+.| +++|.+|..|+||||+|+..++. +++++|+++|++++
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G------advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin 108 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKG------ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT 108 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTT------CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCC------CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC
Confidence 357889999999975 4899999997 99999999999999999998874 34444444444444
No 90
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=7.4e-22 Score=149.40 Aligned_cols=123 Identities=15% Similarity=0.209 Sum_probs=112.6
Q ss_pred hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 101 KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 101 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
.|||+.|+..|+.+++++|+++ .. .+++..|..|.||||+ +..|+.++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~------------------------------~~~~~~~~~g~t~L~~-~~~~~~~~ 50 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-EL------------------------------VHPDALNRFGKTALQV-MMFGSTAI 50 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TC------------------------------CCTTCCCTTSCCHHHH-SCTTCHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hC------------------------------cCccccCCCCCcHHHH-HHcCCHHH
Confidence 4789999999999999999986 21 3466788899999999 99999999
Q ss_pred HHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHH
Q psy11714 181 INILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYE 253 (272)
Q Consensus 181 ~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 253 (272)
+++|+++|+++ .||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+
T Consensus 51 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------~~~~~g~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 51 ALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN---------------VPDGTGALPIHLAVQEGHTA 115 (156)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC---------------CCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC---------------CcCCCCCcHHHHHHHhChHH
Confidence 99999999988 599999999999999999999999998 77889999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCC
Q psy11714 254 ILKILLDRGATLPMPHDV 271 (272)
Q Consensus 254 iv~~Ll~~ga~~~~~~~~ 271 (272)
++++|+++ ++++.++..
T Consensus 116 ~v~~Ll~~-~~~~~~~~~ 132 (156)
T 1bd8_A 116 VVSFLAAE-SDLHRRDAR 132 (156)
T ss_dssp HHHHHHTT-SCTTCCCTT
T ss_pred HHHHHHhc-cCCCCcCCC
Confidence 99999999 999998864
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=8.6e-23 Score=151.37 Aligned_cols=127 Identities=17% Similarity=0.194 Sum_probs=88.4
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHH
Q psy11714 65 FNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFM 144 (272)
Q Consensus 65 ~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~ 144 (272)
+++ .+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------------------------------------------- 36 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-------------------------------------------- 36 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS--------------------------------------------
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------------------------------------------
Confidence 455 56777888888888888877777777766654
Q ss_pred HHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccC
Q psy11714 145 MLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKI 217 (272)
Q Consensus 145 ~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~ 217 (272)
+.+|..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|+++
T Consensus 37 --------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 37 --------------NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp --------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred --------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 233455666666666666666666666666655 36777777777788888888888888
Q ss_pred CCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy11714 218 HVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATL 265 (272)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~ 265 (272)
+ .+|..|.|||++|+..+..+++++|.+++...
T Consensus 103 ~---------------~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 103 N---------------AVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp T---------------CCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred C---------------CCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 7 77889999999999999999999888877643
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=1.1e-21 Score=159.80 Aligned_cols=132 Identities=20% Similarity=0.214 Sum_probs=104.4
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh--------hHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK--------DAL 104 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--------t~l 104 (272)
+...++||.|+..|+.++++.|++ + .++|.+|..|.||||+|+..|+.+++++|+++|++++ |||
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-D------RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-T------CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-C------CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 456788999999999999999999 6 8999999999999999999999999999999999983 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
|+|+..|+.+++++|+++|++++ .++..|.||||+|+... ....+.|||++|+..|+.+++++|
T Consensus 116 ~~A~~~g~~~~v~~Ll~~ga~~~------~~d~~g~t~l~~A~~~~----------~~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 116 HMAAGYVRPEVVEALVELGADIE------VEDERGLTALELAREIL----------KTTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT------CCCTTCCCHHHHHHHHH----------TTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHHHH----------hccCCCCHHHHHHHcChHHHHHHH
Confidence 99999999999999999988776 44555555555555421 113345555555555555555555
Q ss_pred HhC
Q psy11714 185 LEY 187 (272)
Q Consensus 185 l~~ 187 (272)
++.
T Consensus 180 ~~~ 182 (244)
T 3ui2_A 180 EGQ 182 (244)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=168.70 Aligned_cols=131 Identities=13% Similarity=0.096 Sum_probs=101.7
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCccc------CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCChh----
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINC------VDPLNRSSLIAAIEN---ENIELINILLEYNIQVK---- 101 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~---- 101 (272)
..+.|+.|+..|+.+.++.|+..+ .+++. .+..|.||||+|+.. ++.+++++|+++|++++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g------~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~ 224 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG------QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA 224 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT------CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC------CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC
Confidence 345688888888888888888876 77776 577888888888886 78888888888888873
Q ss_pred ---hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCH
Q psy11714 102 ---DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENI 178 (272)
Q Consensus 102 ---t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~ 178 (272)
||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~--------------------------------~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALV--------------------------------GTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCC--------------------------------SCCCTTSCCHHHHHHHHTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC--------------------------------CCcCCCCCCHHHHHHHcCCH
Confidence 7888888888888888888877554 46778888888888888888
Q ss_pred HHHHHHHhCCCCc-hhHHHHHHHcCC
Q psy11714 179 ELINILLEYNIQV-KDALLHAIKEEY 203 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-~t~l~~A~~~~~ 203 (272)
+++++|+++|++. .||||+|+..|+
T Consensus 273 ~iv~~Ll~~ga~~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 273 ECEELLEQAQAGTFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHHHHHHHTTSSCCC-------
T ss_pred HHHHHHHHhcCCCCCChhHHHHhcCC
Confidence 8888888888766 688888887765
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=4.2e-21 Score=159.32 Aligned_cols=127 Identities=14% Similarity=0.141 Sum_probs=113.9
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHc---CCH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIEN---ENI 178 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~---g~~ 178 (272)
++|+.|+..++.+.++.+++.|++++. ...++..|..|.||||+|+.. |+.
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~--------------------------~~~l~~~~~~g~t~Lh~A~~~~~~~~~ 185 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTE--------------------------KIPLANGHEPDETALHLAVRSVDRTSL 185 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTS--------------------------BCCCSSCSSTTCBHHHHHHHHCCTTTH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhh--------------------------hccccccccCCCCcchHHHHhcccchH
Confidence 489999999999999999998887651 112556678899999999999 899
Q ss_pred HHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC
Q psy11714 179 ELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN 251 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 251 (272)
+++++|+++|+++ .||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+
T Consensus 186 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~---------------~~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 186 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE---------------IANESGETPLDIAKRLKH 250 (278)
T ss_dssp HHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------CccCCCCCHHHHHHHcCC
Confidence 9999999999998 599999999999999999999999999 789999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCC
Q psy11714 252 YEILKILLDRGATLPMPH 269 (272)
Q Consensus 252 ~~iv~~Ll~~ga~~~~~~ 269 (272)
.+++++|+++|++....+
T Consensus 251 ~~~v~~Ll~~ga~~~~~~ 268 (278)
T 1dcq_A 251 EHCEELLTQALSGRFNSH 268 (278)
T ss_dssp HHHHHHHHHHHTTCCCSS
T ss_pred HHHHHHHHHcCCCCCCcc
Confidence 999999999999866554
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.9e-21 Score=151.42 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=109.2
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh--------hHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK--------DAL 104 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--------t~l 104 (272)
....++|+.|+..|+.+.++.|++ + .++|.+|..|.||||+|+..|+.+++++|+++|++++ |||
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL 114 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-D------RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-T------SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-c------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 456788999999999999999999 6 8999999999999999999999999999999999883 799
Q ss_pred HHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 105 LHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 105 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
|+|+..++.+++++|+++|++++ .++..|.|||++|+..... ..+.++|++|+..|..+++++|
T Consensus 115 ~~A~~~~~~~~v~~Ll~~ga~~~------~~d~~g~tpl~~A~~~~~~----------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELGADIE------VEDERGLTALELAREILKT----------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTT------CCCTTSCCHHHHHHHHHHT----------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHcCCCCc------CCCCCCCCHHHHHHHhccC----------cccccHHHHHHHcCHHHHHHHH
Confidence 99999999999999999998877 5666677777776653211 2345666666666666666666
Q ss_pred HhC
Q psy11714 185 LEY 187 (272)
Q Consensus 185 l~~ 187 (272)
.++
T Consensus 179 ~~~ 181 (183)
T 3deo_A 179 EGQ 181 (183)
T ss_dssp HTC
T ss_pred HHh
Confidence 553
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=5.5e-22 Score=159.05 Aligned_cols=122 Identities=18% Similarity=0.199 Sum_probs=98.9
Q ss_pred hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 101 KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 101 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.++
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~ 121 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVG--------------------------------VNGLDKAGSTALYWACHGGHKDI 121 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccccccccccCcHHHHHHHHhCCCC--------------------------------ccccCCCCCCHHHHHHHcCCHHH
Confidence 5788888888888888888887654 44678889999999999999999
Q ss_pred HHHHHhC-CCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCH
Q psy11714 181 INILLEY-NIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNY 252 (272)
Q Consensus 181 ~~~Ll~~-g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~ 252 (272)
+++|++. |+++ .||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..+..
T Consensus 122 v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~~~ 186 (222)
T 3ehr_A 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD---------------LRNIEKKLAFDMATNAACA 186 (222)
T ss_dssp HHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC---------------CCCTTSCCHHHHCCSHHHH
T ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------------cccCCCCCHHHHhcchhHH
Confidence 9999998 8887 599999999999999999999999999 7889999999999999999
Q ss_pred HHHHHHHHCCCCCCCCC
Q psy11714 253 EILKILLDRGATLPMPH 269 (272)
Q Consensus 253 ~iv~~Ll~~ga~~~~~~ 269 (272)
++++.|+++|++.+..+
T Consensus 187 ~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 187 SLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHC-------------
T ss_pred HHHHHHhccchhhhccc
Confidence 99999999999987765
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=6e-21 Score=170.86 Aligned_cols=128 Identities=13% Similarity=0.118 Sum_probs=108.3
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccC------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCChh----
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCV------DPLNRSSLIAAIE---NENIELINILLEYNIQVK---- 101 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~g~~~~---- 101 (272)
..+.|+.|+..|+.+.++.||+.| +++|.. +..|.||||+|+. .|+.+++++|+++|++++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g------~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~ 205 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANG------QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA 205 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTT------CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhc------ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC
Confidence 346799999999999999999998 888877 8899999999976 899999999999999995
Q ss_pred ---hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCH
Q psy11714 102 ---DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENI 178 (272)
Q Consensus 102 ---t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~ 178 (272)
||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~--------------------------------~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRALV--------------------------------GTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCCCC--------------------------------SCCCTTCCCHHHHHHHTTCH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC--------------------------------CCcCCCCCCHHHHHHHcCCH
Confidence 8999999999999999999988654 47889999999999999999
Q ss_pred HHHHHHHhCCCCc-hhHHHHHHH
Q psy11714 179 ELINILLEYNIQV-KDALLHAIK 200 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-~t~l~~A~~ 200 (272)
+++++|+++|+++ .+|+|.+..
T Consensus 254 ~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 254 ECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp HHHHHHHHTCC------------
T ss_pred HHHHHHHHhCCCCCCCcceeecc
Confidence 9999999999999 478887654
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.5e-21 Score=159.03 Aligned_cols=128 Identities=19% Similarity=0.166 Sum_probs=104.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHH
Q psy11714 72 PLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFM 144 (272)
Q Consensus 72 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~ 144 (272)
..|.||||+|+..|+.+++++|++ |++++ ||||+|+..|+.+++++|+++|++++
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------------- 104 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD----------------- 104 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-----------------
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-----------------
Confidence 467889999999999999999988 87774 79999999999999999998876554
Q ss_pred HHHhcCCCCccccccCCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCcc
Q psy11714 145 MLDELKDQPEVFNINCVD-PLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEK 216 (272)
Q Consensus 145 ~~~~~~~~~~~~~~~~~d-~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~ 216 (272)
.++ ..|.||||+|+..|+.+++++|+++|+++ .||||+|+..
T Consensus 105 ---------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~--------------- 154 (244)
T 3ui2_A 105 ---------------HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI--------------- 154 (244)
T ss_dssp ---------------CCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH---------------
T ss_pred ---------------cCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH---------------
Confidence 555 66888999999999999999999888887 4888888752
Q ss_pred CCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy11714 217 IHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDRGAT 264 (272)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~ 264 (272)
.....+.|||++|+..|+.+++++|++++.+
T Consensus 155 -----------------~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 155 -----------------LKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp -----------------HTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred -----------------HhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 1123579999999999999999999987544
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=3.5e-21 Score=139.99 Aligned_cols=103 Identities=19% Similarity=0.204 Sum_probs=85.4
Q ss_pred hhHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHH
Q psy11714 101 KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIEL 180 (272)
Q Consensus 101 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~ 180 (272)
.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.++
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~ 55 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGED--------------------------------VNRTLEGGRKPLHYAADCGQLEI 55 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC--------------------------------TTSCCTTSSCHHHHHHHTTCHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCC--------------------------------cCccCCCCCcHHHHHHHcCCHHH
Confidence 4677888888888888888876644 44667788888888888888899
Q ss_pred HHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcC
Q psy11714 181 INILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMN 250 (272)
Q Consensus 181 ~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~ 250 (272)
+++|+++|+++ .||||+|+..++.+++++|+++|++++ .++..|.||||+|...+
T Consensus 56 v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---------------~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 56 LEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT---------------VKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHCCCHH
T ss_pred HHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHhCCHH
Confidence 99888888887 489999999999999999999999988 78899999999995443
No 100
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.3e-20 Score=130.03 Aligned_cols=86 Identities=33% Similarity=0.448 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCC
Q psy11714 164 LNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTF 236 (272)
Q Consensus 164 ~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (272)
+|+||||+|+..|+.+++++|++.|+++ .||||+|+..++.+++++|+++|++++ .+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------~~d 65 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN---------------AKD 65 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------CCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------ccC
Confidence 4889999999999999999999999988 599999999999999999999999999 788
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy11714 237 TPDITPLILAAHMNNYEILKILLDRGAT 264 (272)
Q Consensus 237 ~~g~t~l~~A~~~~~~~iv~~Ll~~ga~ 264 (272)
..|.||||+|+..++.+++++|+++||+
T Consensus 66 ~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 66 KNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999986
No 101
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1.5e-20 Score=139.13 Aligned_cols=101 Identities=22% Similarity=0.210 Sum_probs=93.3
Q ss_pred ccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhh
Q psy11714 156 FNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEA 228 (272)
Q Consensus 156 ~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 228 (272)
.++ .+|..|.||||+|+..|+.+++++|++.|+++ .||||+|+..++.+++++|+++|++++
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------- 70 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN---------- 70 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc----------
Confidence 455 67889999999999999999999999999987 599999999999999999999999998
Q ss_pred hhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy11714 229 VDRSSSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDVR 272 (272)
Q Consensus 229 ~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 272 (272)
.++..|.||||+|+..++.+++++|+++|++++.+|.++
T Consensus 71 -----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 109 (137)
T 3c5r_A 71 -----TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG 109 (137)
T ss_dssp -----CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred -----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 778899999999999999999999999999999998653
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.3e-20 Score=168.76 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=109.6
Q ss_pred hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHH---cCCH
Q psy11714 102 DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIE---NENI 178 (272)
Q Consensus 102 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~---~g~~ 178 (272)
+.|+.|+..|+.++++.|+++|++++.. ......+..|.||||+|+. .|+.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~--------------------------~~~~~~~~~g~t~Lh~A~~~a~~g~~ 187 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQP--------------------------LPGPDAQAPEELVLHLAVKVANQASL 187 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSC--------------------------BCCSSSCCSCBCHHHHHHHTCCTTTH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCC--------------------------CCCcccccccchHHHHHHHhcccccH
Confidence 5799999999999999999999887620 1122347789999999976 8999
Q ss_pred HHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC
Q psy11714 179 ELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN 251 (272)
Q Consensus 179 ~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 251 (272)
+++++|+++|+++ +||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+
T Consensus 188 ~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~---------------~~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 188 PLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG---------------TVNEAGETALDIARKKHH 252 (497)
T ss_dssp HHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS---------------CCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------------CcCCCCCCHHHHHHHcCC
Confidence 9999999999998 599999999999999999999999999 789999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCC
Q psy11714 252 YEILKILLDRGATLPMPH 269 (272)
Q Consensus 252 ~~iv~~Ll~~ga~~~~~~ 269 (272)
.+++++|+++||+++..+
T Consensus 253 ~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 253 KECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHHHHHHHHTCC------
T ss_pred HHHHHHHHHhCCCCCCCc
Confidence 999999999999988743
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=7.9e-21 Score=159.41 Aligned_cols=123 Identities=18% Similarity=0.100 Sum_probs=98.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCChh-------------hHHHHHHHc---CcHHHHHHHHccccccccCCCCccccCCc
Q psy11714 76 SSLIAAIENENIELINILLEYNIQVK-------------DALLHAIKE---EYVEAVEILLEWEEKIHVHGQPYVSENKG 139 (272)
Q Consensus 76 t~L~~A~~~~~~~~v~~Ll~~g~~~~-------------t~l~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 139 (272)
++|+.|+..|+.+.++.|++.|++++ ||||+|+.. ++.+++++|+++|++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-------------- 218 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-------------- 218 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC--------------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC--------------
Confidence 56778888888887777777777653 578888776 677788888877654
Q ss_pred ccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHh
Q psy11714 140 RTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLE 212 (272)
Q Consensus 140 ~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~ 212 (272)
++.+|..|.||||+|+..|+.+++++|+++|+++ .|||++|+..++.+++++|++
T Consensus 219 ------------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 219 ------------------LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp ------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred ------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5578899999999999999999999999999998 599999999999999999999
Q ss_pred cCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCC
Q psy11714 213 WEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNN 251 (272)
Q Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 251 (272)
+|++ .|.||||+|+.+|+
T Consensus 281 ~ga~---------------------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 281 AQAG---------------------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHH---------------------TTSSCCC-------
T ss_pred hcCC---------------------CCCChhHHHHhcCC
Confidence 9875 36899999998875
No 104
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=9.1e-21 Score=137.78 Aligned_cols=89 Identities=22% Similarity=0.284 Sum_probs=81.4
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
+...++|+.|+..|+.+.++.|++.+ .+++.+|..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKG------EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLL 78 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTT------CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcC------CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHH
Confidence 34567899999999999999999997 8999999999999999999999999999999999984 7999
Q ss_pred HHHHcCcHHHHHHHHccccccc
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIH 127 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~ 127 (272)
+|+..++.+++++|+++|++++
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999886654
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=3.5e-20 Score=144.17 Aligned_cols=99 Identities=20% Similarity=0.181 Sum_probs=52.2
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc--------hhHHHHHHHcCCHHHHHHHHhcCccCCC----CCCcchhh
Q psy11714 160 CVDPLNRSSLIAAIENENIELINILLEYNIQV--------KDALLHAIKEEYVEAVEILLEWEEKIHV----HGQPYSWE 227 (272)
Q Consensus 160 ~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~--------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~----~~~~~~~~ 227 (272)
.+|..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++. +.+|++++
T Consensus 71 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 150 (183)
T 3deo_A 71 AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 150 (183)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHH
Confidence 44445555555555555555555555555544 2555555555555555555555555541 01111111
Q ss_pred hhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy11714 228 AVDRSSSTFTPDITPLILAAHMNNYEILKILLDR 261 (272)
Q Consensus 228 ~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ 261 (272)
... .....+.++|++|+..|+.+++++|.++
T Consensus 151 ~~~---~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 151 REI---LKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHH---HHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHh---ccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 111 0112345666666777889999999875
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=7.9e-20 Score=151.62 Aligned_cols=124 Identities=12% Similarity=0.103 Sum_probs=104.5
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCChh-------hHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIEN---ENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
...|+.|+..|+.+.++.++..|........++..+..|.||||+|+.. |+.+++++|+++|++++ ||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 4568999999999999999998721111111556688899999999999 89999999999999984 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILL 185 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll 185 (272)
+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~--------------------------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll 258 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASI--------------------------------EIANESGETPLDIAKRLKHEHCEELLT 258 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC--------------------------------CCccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999987654 477889999999999999999999999
Q ss_pred hCCCCc
Q psy11714 186 EYNIQV 191 (272)
Q Consensus 186 ~~g~~~ 191 (272)
++|++.
T Consensus 259 ~~ga~~ 264 (278)
T 1dcq_A 259 QALSGR 264 (278)
T ss_dssp HHHTTC
T ss_pred HcCCCC
Confidence 988763
No 107
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=1.4e-20 Score=150.75 Aligned_cols=118 Identities=19% Similarity=0.247 Sum_probs=70.8
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCChh-------hHHHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEY-NIQVK-------DALLHA 107 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~-------t~l~~A 107 (272)
.++|+.|+..|+.++++.|++.| +++|.+|..|.||||+|+..|+.+++++|+++ |++++ ||||+|
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNR------VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred ccccccccccCcHHHHHHHHhCC------CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 45677777777777777777765 66777777777777777777777777777766 65552 566666
Q ss_pred HHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy11714 108 IKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEY 187 (272)
Q Consensus 108 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~ 187 (272)
+..|+.+++++|+++|+++ +.+|..|.|||++|+..|+.++++.|++.
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~--------------------------------~~~~~~g~t~l~~A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGART--------------------------------DLRNIEKKLAFDMATNAACASLLKKKQGT 195 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCS--------------------------------CCCCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred HHcCCHHHHHHHHHcCCCC--------------------------------ccccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence 6666666666666655433 34555666666666666666666666655
Q ss_pred CCCc
Q psy11714 188 NIQV 191 (272)
Q Consensus 188 g~~~ 191 (272)
|++.
T Consensus 196 ~~~~ 199 (222)
T 3ehr_A 196 DAVR 199 (222)
T ss_dssp ----
T ss_pred chhh
Confidence 5543
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=1.1e-19 Score=156.24 Aligned_cols=117 Identities=18% Similarity=0.183 Sum_probs=107.4
Q ss_pred hhHHHHHHHc-CcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCC--CCCCCHHHHHHHcCC
Q psy11714 101 KDALLHAIKE-EYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVD--PLNRSSLIAAIENEN 177 (272)
Q Consensus 101 ~t~l~~A~~~-~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d--~~~~t~L~~a~~~g~ 177 (272)
.|+||.|+.. ++.+++++|+++|++++ ..+ ..|.||||+|+..|+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn--------------------------------~~~~~~~g~TpLh~Aa~~g~ 247 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVN--------------------------------WVNGGQDNATPLIQATAANS 247 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTT--------------------------------CCCTTTTCCCHHHHHHHTTC
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCC--------------------------------ccccccCCCCHHHHHHHCCC
Confidence 5799999999 99999999999887665 445 789999999999999
Q ss_pred HHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcC
Q psy11714 178 IELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMN 250 (272)
Q Consensus 178 ~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~ 250 (272)
.+++++|+++|+++ .||||+|+..++.+++++|+++|++++ .+|..|.||||+|+..+
T Consensus 248 ~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~---------------~~d~~G~TpL~~A~~~g 312 (368)
T 3jue_A 248 LLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG---------------ARDSEGRDPLTIAMETA 312 (368)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------CCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC---------------CcCCCCCCHHHHHHHCC
Confidence 99999999999998 599999999999999999999999999 78899999999999999
Q ss_pred CHHHHHHHHHCCCC
Q psy11714 251 NYEILKILLDRGAT 264 (272)
Q Consensus 251 ~~~iv~~Ll~~ga~ 264 (272)
+.+++++|++.|..
T Consensus 313 ~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 313 NADIVTLLRLAKMR 326 (368)
T ss_dssp CHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999988754
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=1.3e-20 Score=135.21 Aligned_cols=97 Identities=25% Similarity=0.203 Sum_probs=91.6
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhhhcC
Q psy11714 160 CVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRS 232 (272)
Q Consensus 160 ~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~ 232 (272)
.+|..|.||||+|+..|+.+++++|+++|+++ .||||+|+..++.+++++|+++|++++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-------------- 69 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-------------- 69 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT--------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc--------------
Confidence 46889999999999999999999999999888 599999999999999999999999998
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy11714 233 SSTFTPDITPLILAAHMNNYEILKILLDRGATLPMPHDV 271 (272)
Q Consensus 233 ~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 271 (272)
.++..|.||||+|+..++.+++++|+++||++|.++.+
T Consensus 70 -~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~ 107 (115)
T 2l6b_A 70 -ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWG 107 (115)
T ss_dssp -CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCC
T ss_pred -ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcc
Confidence 77889999999999999999999999999999988765
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.6e-19 Score=124.58 Aligned_cols=86 Identities=30% Similarity=0.412 Sum_probs=67.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHH
Q psy11714 73 LNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMM 145 (272)
Q Consensus 73 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~ 145 (272)
+|+||||+|+..|+.+++++|+++|++++ ||||+|+..++.+++++|+++|++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------------------- 60 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-------------------- 60 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--------------------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------------
Confidence 36778888888888888888888777773 688888888888888888887654
Q ss_pred HHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Q psy11714 146 LDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQ 190 (272)
Q Consensus 146 ~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~ 190 (272)
++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 61 ------------~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 61 ------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 446778899999999999999999999998875
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=1.5e-19 Score=155.32 Aligned_cols=117 Identities=19% Similarity=0.229 Sum_probs=106.6
Q ss_pred hhHHHHHHHc-CCHHHHHHHHHccCCCCCCCCcccCC--CCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHH
Q psy11714 36 EKRFLLVAER-GDCATVRKMLDELKDQPEVFNINCVD--PLNRSSLIAAIENENIELINILLEYNIQVK-------DALL 105 (272)
Q Consensus 36 ~~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~~n~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~ 105 (272)
.+.|+.|+.. |+.+.++.|++.| +++|..+ ..|.||||+|+..|+.+++++|+++|++++ ||||
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~G------advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHG------ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTT------CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcC------CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 4579999999 9999999999997 9999988 789999999999999999999999999994 7999
Q ss_pred HHHHcCcHHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy11714 106 HAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILL 185 (272)
Q Consensus 106 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll 185 (272)
+|+..++.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~--------------------------------~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADL--------------------------------GARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT--------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHCcCCC--------------------------------CCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 999999999999999987654 478889999999999999999999999
Q ss_pred hCCCC
Q psy11714 186 EYNIQ 190 (272)
Q Consensus 186 ~~g~~ 190 (272)
..+..
T Consensus 322 ~~~~~ 326 (368)
T 3jue_A 322 LAKMR 326 (368)
T ss_dssp HHHC-
T ss_pred HcCCC
Confidence 87633
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=4.5e-18 Score=121.86 Aligned_cols=91 Identities=22% Similarity=0.182 Sum_probs=69.3
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCCccc
Q psy11714 69 CVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENKGRT 141 (272)
Q Consensus 69 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t 141 (272)
.+|..|.||||+|+..|+.+++++|+++|++++ ||||+|+..++.+++++|+++|+++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--------------- 68 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV--------------- 68 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT---------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC---------------
Confidence 366788888888888888888888888887763 6788888888888888888766443
Q ss_pred HHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc
Q psy11714 142 IFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQV 191 (272)
Q Consensus 142 ~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~ 191 (272)
+.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 69 -----------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 69 -----------------NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp -----------------TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred -----------------cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 456677777777777777777777777777776
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=8.4e-17 Score=114.43 Aligned_cols=87 Identities=18% Similarity=0.174 Sum_probs=77.9
Q ss_pred cccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-------hhHHHHHHHcCCHHHHHHHHhcCccCCCCCCcchhhhh
Q psy11714 157 NINCVDPLNRSSLIAAIENENIELINILLEYNIQV-------KDALLHAIKEEYVEAVEILLEWEEKIHVHGQPYSWEAV 229 (272)
Q Consensus 157 ~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~-------~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 229 (272)
.....|..|.|+||+|+..|+.+++++|++.|+++ .||||+|+..++.+++++|+++|++++
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~----------- 84 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX----------- 84 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----------
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----------
Confidence 34566789999999999999999999999999988 599999999999999999999999998
Q ss_pred hcCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy11714 230 DRSSSTFTPDITPLILAAHMNNYEILKIL 258 (272)
Q Consensus 230 ~~~~~~~~~g~t~l~~A~~~~~~~iv~~L 258 (272)
.++..|.||||+|+..++.+++++|
T Consensus 85 ----~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 85 ----AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ----ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 7888999999999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=2.7e-16 Score=111.73 Aligned_cols=87 Identities=22% Similarity=0.276 Sum_probs=57.8
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChh-------hHHHHHHHcCcHHHHHHHHccccccccCCCCccccCC
Q psy11714 66 NINCVDPLNRSSLIAAIENENIELINILLEYNIQVK-------DALLHAIKEEYVEAVEILLEWEEKIHVHGQPYVSENK 138 (272)
Q Consensus 66 ~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 138 (272)
.....+..|.|+||+|+..|+.+++++|+++|++++ ||||+|+..++.+++++|+++|++
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------- 82 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------- 82 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 344455666677777777777777777777766662 577777777777777777776544
Q ss_pred cccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11714 139 GRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINIL 184 (272)
Q Consensus 139 ~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~L 184 (272)
++.+|..|.||||+|+..|+.+++++|
T Consensus 83 -------------------~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 -------------------VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp -------------------TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------------ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 346677788888888888888888776
No 115
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=92.36 E-value=1.2 Score=33.46 Aligned_cols=133 Identities=16% Similarity=0.069 Sum_probs=93.8
Q ss_pred ChhhhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCc
Q psy11714 33 TPQEKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEY 112 (272)
Q Consensus 33 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~ 112 (272)
++...+|-.|+..|+++....+.+.. +.. ......=..|...|+.++++....+--|+..-+......|+
T Consensus 6 ~D~~~rF~LAL~lg~l~~A~e~a~~l---------~~~-~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~ 75 (177)
T 3mkq_B 6 QDPHIRFDLALEYGNLDAALDEAKKL---------NDS-ITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGD 75 (177)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHH---------CCH-HHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CChHHHHHHHHhcCCHHHHHHHHHHh---------CCH-HHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCC
Confidence 45677899999999999998887763 011 11223445677889999999999998898877777677788
Q ss_pred HHHHHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHH-HHHHHHhCCCCc
Q psy11714 113 VEAVEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIE-LINILLEYNIQV 191 (272)
Q Consensus 113 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~-~~~~Ll~~g~~~ 191 (272)
.+-++.+.+- -....+...+++.+...|..+ +++.|.+.|- .
T Consensus 76 ~e~L~kla~i------------------------------------A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r-~ 118 (177)
T 3mkq_B 76 VNKLSKMQNI------------------------------------AQTREDFGSMLLNTFYNNSTKERSSIFAEGGS-L 118 (177)
T ss_dssp HHHHHHHHHH------------------------------------HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC-H
T ss_pred HHHHHHHHHH------------------------------------HHHCccHHHHHHHHHHcCCHHHHHHHHHHCCC-h
Confidence 8777766541 111223445677777788855 5566666554 3
Q ss_pred hhHHHHHHHcCCHHHHHHHHh
Q psy11714 192 KDALLHAIKEEYVEAVEILLE 212 (272)
Q Consensus 192 ~t~l~~A~~~~~~~~~~~Ll~ 212 (272)
.-+...|-.+|..++.+-+++
T Consensus 119 ~eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 119 PLAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHH
Confidence 466777888999999888775
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=58.59 E-value=9.1 Score=20.42 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=18.5
Q ss_pred hhhHHHHHHHcCCHHHHHHHHHc
Q psy11714 35 QEKRFLLVAERGDCATVRKMLDE 57 (272)
Q Consensus 35 ~~~~l~~a~~~g~~~~~~~ll~~ 57 (272)
-++.+..|+..||.+.++.|=.+
T Consensus 13 iEQqiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 13 IRKQMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHH
Confidence 35668899999999999887554
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=52.76 E-value=50 Score=28.10 Aligned_cols=61 Identities=23% Similarity=0.215 Sum_probs=36.1
Q ss_pred HcCCHHHHHHHHhcCccCCCCCCcchhhhhhcCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy11714 200 KEEYVEAVEILLEWEEKIHVHGQPYSWEAVDRSSSTFTPDITPLILAAHMNNYEILKILLDR 261 (272)
Q Consensus 200 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~iv~~Ll~~ 261 (272)
..|+...|+.-+..|.+++-..+..........+ ....|.|.+|+|++..+.+++-.|+.-
T Consensus 31 ~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~-af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPS-AFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTT-TCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCChhHHHHHHhcCCchhcccCHHHHHHhCCCc-ccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3445555555455555544222222222222222 244799999999999999999999863
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=37.09 E-value=1.1e+02 Score=26.14 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=41.2
Q ss_pred HHHHcCCHHHHHHHHHccCCCCCCCC------cccC--CCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy11714 41 LVAERGDCATVRKMLDELKDQPEVFN------INCV--DPLNRSSLIAAIENENIELINILLEY 96 (272)
Q Consensus 41 ~a~~~g~~~~~~~ll~~~~~~~~~~~------~n~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~ 96 (272)
..+..|+...|..++..|++-..... +|.. -..|.|.+|.|+...+.+++..|+..
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 45667999999999999853322111 2222 23589999999999999999999973
No 119
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=31.16 E-value=1.4e+02 Score=27.06 Aligned_cols=124 Identities=14% Similarity=0.023 Sum_probs=66.2
Q ss_pred hhHHHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCChhhHHHHHHHcCcHHH
Q psy11714 36 EKRFLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDALLHAIKEEYVEA 115 (272)
Q Consensus 36 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~t~l~~A~~~~~~~~ 115 (272)
...+..|...|+++.+..+..... .+ ......=.+|...++.++++....+.-+......+....++.+.
T Consensus 656 ~~~f~~~l~~~~~~~A~~~~~~~~---------~~-~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~ 725 (814)
T 3mkq_A 656 DQKFELALKVGQLTLARDLLTDES---------AE-MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEG 725 (814)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTTCC---------CH-HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHH
T ss_pred chheehhhhcCCHHHHHHHHHhhC---------cH-hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHH
Confidence 445666777777777766655420 00 01122334555666777777666665555544444444555554
Q ss_pred HHHHHccccccccCCCCccccCCcccHHHHHHhcCCCCccccccCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCchhHH
Q psy11714 116 VEILLEWEEKIHVHGQPYVSENKGRTIFMMLDELKDQPEVFNINCVDPLNRSSLIAAIENENIELINILLEYNIQVKDAL 195 (272)
Q Consensus 116 ~~~Ll~~g~~~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~d~~~~t~L~~a~~~g~~~~~~~Ll~~g~~~~t~l 195 (272)
+..+.+. -........+.+.+...|+++-+..++...-....++
T Consensus 726 ~~~~~~~------------------------------------a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~ 769 (814)
T 3mkq_A 726 LVTLAKD------------------------------------AETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAA 769 (814)
T ss_dssp HHHHHHH------------------------------------HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHH------------------------------------HHHcCchHHHHHHHHHcCCHHHHHHHHHHcCChHHHH
Confidence 4433321 0111222345666666777666555554444445777
Q ss_pred HHHHHcCCHH
Q psy11714 196 LHAIKEEYVE 205 (272)
Q Consensus 196 ~~A~~~~~~~ 205 (272)
..|-.++..+
T Consensus 770 ~lA~~~~~~~ 779 (814)
T 3mkq_A 770 FLGSTYGLGD 779 (814)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHHhCCCh
Confidence 8888777555
No 120
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=27.13 E-value=73 Score=20.36 Aligned_cols=40 Identities=23% Similarity=0.284 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCch---hHHHHHHHcCCHH-HHHHHHhcCccCCC
Q psy11714 178 IELINILLEYNIQVK---DALLHAIKEEYVE-AVEILLEWEEKIHV 219 (272)
Q Consensus 178 ~~~~~~Ll~~g~~~~---t~l~~A~~~~~~~-~~~~Ll~~g~~~~~ 219 (272)
.+.++.|++.|.+.. .+| ....++.+ .++||+.+..+++.
T Consensus 22 ~~~I~qL~~MGF~~~~a~~AL--~~~n~n~e~A~ewL~~h~~D~D~ 65 (85)
T 2dkl_A 22 SRLIKQLTDMGFPREPAEEAL--KSNNMNLDQAMSALLEKKVDVDK 65 (85)
T ss_dssp HHHHHHHHHHTCCHHHHHHHH--HHTTSCHHHHHHHHHTTSCCSSC
T ss_pred HHHHHHHHHcCCCHHHHHHHH--HHcCCCHHHHHHHHHHCcCCccc
Confidence 568899999998874 344 33344554 68999999888873
No 121
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.84 E-value=83 Score=19.45 Aligned_cols=42 Identities=10% Similarity=0.064 Sum_probs=27.8
Q ss_pred CHHHHHHHHhCCCCchhHHHH--HHHcCCH-HHHHHHHhcCccCC
Q psy11714 177 NIELINILLEYNIQVKDALLH--AIKEEYV-EAVEILLEWEEKIH 218 (272)
Q Consensus 177 ~~~~~~~Ll~~g~~~~t~l~~--A~~~~~~-~~~~~Ll~~g~~~~ 218 (272)
..+.++.|++.|.+...+... ++...+. ..++||+++..+.+
T Consensus 9 ~e~~v~~L~~MGF~~~~a~~AL~~t~n~~ve~A~ewL~~~~~d~d 53 (74)
T 2dag_A 9 DESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPD 53 (74)
T ss_dssp CHHHHHHHHHHSCCHHHHHHHHHHHTSCCHHHHHHHHHHHTTSTT
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHhCCCCHHHHHHHHHhCCCCcc
Confidence 457889999999887433222 2222235 46899999887765
No 122
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=22.20 E-value=3e+02 Score=23.82 Aligned_cols=78 Identities=10% Similarity=0.187 Sum_probs=42.1
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCCCCCCcccCCCCCCcHHHHHHHc-CC-------------HHHHHHHHHCCCChh---
Q psy11714 39 FLLVAERGDCATVRKMLDELKDQPEVFNINCVDPLNRSSLIAAIEN-EN-------------IELINILLEYNIQVK--- 101 (272)
Q Consensus 39 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~n~~~~~g~t~L~~A~~~-~~-------------~~~v~~Ll~~g~~~~--- 101 (272)
|...+..|+++.+..+++.-.. .+..+|. ..++.|..++.. +. .++.+-+...|..++
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~--~Gv~pd~---~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t 107 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARR--NGVQLSQ---YHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT 107 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHH--HTCCCCH---HHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHH--cCCCCCH---hHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH
Confidence 4445667999877776654210 0133332 233445444432 21 345566677888774
Q ss_pred --hHHHHHHHcCcHHHHHHHHc
Q psy11714 102 --DALLHAIKEEYVEAVEILLE 121 (272)
Q Consensus 102 --t~l~~A~~~~~~~~~~~Ll~ 121 (272)
+.+...+..|+.+-+..+++
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~ 129 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVK 129 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHH
Confidence 34566677788765544443
No 123
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=21.35 E-value=82 Score=20.05 Aligned_cols=42 Identities=24% Similarity=0.228 Sum_probs=28.2
Q ss_pred CHHHHHHHHhCCCCchhHHHHHH--HcCCHH-HHHHHHhcCccCC
Q psy11714 177 NIELINILLEYNIQVKDALLHAI--KEEYVE-AVEILLEWEEKIH 218 (272)
Q Consensus 177 ~~~~~~~Ll~~g~~~~t~l~~A~--~~~~~~-~~~~Ll~~g~~~~ 218 (272)
..+.++.|++.|.+-..+...-. .+++.+ .++||+++..+.+
T Consensus 29 ~e~~v~~L~~MGF~~~~a~~AL~~t~n~n~e~A~ewL~~h~~d~d 73 (84)
T 1vek_A 29 NEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSHMDDPD 73 (84)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHTTTCCHHHHHHHHHHHTTCST
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHHHHHHhCCCccc
Confidence 56788999999988743333212 223454 6899999877665
No 124
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=20.49 E-value=1.2e+02 Score=18.12 Aligned_cols=40 Identities=25% Similarity=0.234 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCCchhHHHH--HHHcCCHH-HHHHHHhcCccCC
Q psy11714 179 ELINILLEYNIQVKDALLH--AIKEEYVE-AVEILLEWEEKIH 218 (272)
Q Consensus 179 ~~~~~Ll~~g~~~~t~l~~--A~~~~~~~-~~~~Ll~~g~~~~ 218 (272)
+.++.|++.|.+...+... +..+.+.+ .++||+++..+.+
T Consensus 11 ~~v~~L~~MGF~~~~a~~AL~~t~n~~~e~A~~wL~~h~~d~d 53 (64)
T 2crn_A 11 SLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDHCNDPS 53 (64)
T ss_dssp SSHHHHHHTSCCHHHHHHHHHHHTSCCHHHHHHHHHHHSSSTT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCCHHHHHHHHHhCCCCcc
Confidence 4678899999887433332 22222444 6899999987766
Done!