BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11715
(118 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ME9|A Chain A, Crystal Structure Of Sgf29 In Complex With H3k4me3 Peptide
pdb|3ME9|B Chain B, Crystal Structure Of Sgf29 In Complex With H3k4me3 Peptide
pdb|3MET|A Chain A, Crystal Structure Of Sgf29 In Complex With H3k4me2
pdb|3MET|B Chain B, Crystal Structure Of Sgf29 In Complex With H3k4me2
pdb|3MEU|A Chain A, Crystal Structure Of Sgf29 In Complex With H3r2me2sk4me3
pdb|3MEU|B Chain B, Crystal Structure Of Sgf29 In Complex With H3r2me2sk4me3
pdb|3MEV|A Chain A, Crystal Structure Of Sgf29 In Complex With R2ak4me3
pdb|3MEV|B Chain B, Crystal Structure Of Sgf29 In Complex With R2ak4me3
Length = 180
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPSHIAN 118
R+ +L+ SA TLPLW+GKPG KP L GAIPA ++A
Sbjct: 2 RRGVLXTLLQQSAXTLPLWIGKPGDKPPPLCGAIPASGDYVAR 44
>pdb|3MEA|A Chain A, Crystal Structure Of The Sgf29 In Complex With H3k4me3
Length = 180
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 90 TLPLWVGKPGQKPAALVGAIPADPSHIAN 118
TLPLW+GKPG KP L GAIPA ++A
Sbjct: 18 TLPLWIGKPGDKPPPLCGAIPASGDYVAR 46
>pdb|3MEW|A Chain A, Crystal Structure Of Novel Tudor Domain-Containing Protein
Sgf29
Length = 159
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 90 TLPLWVGKPGQKPAALVGAIPADPSHIAN 118
TLPLW+GKPG KP L GAIPA ++A
Sbjct: 1 TLPLWIGKPGDKPPPLCGAIPASGDYVAR 29
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 418 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 456
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 29.6 bits (65), Expect = 0.38, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 421 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 459
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 415 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 453
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 419 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 457
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 415 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 453
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 415 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 453
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 424 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 462
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 421 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 459
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 29.6 bits (65), Expect = 0.40, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 455 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 493
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 29.6 bits (65), Expect = 0.40, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S T PLW+G P + +P DPS
Sbjct: 420 RVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPS 458
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 29.3 bits (64), Expect = 0.54, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S + PLW+G P + IP DPS
Sbjct: 424 RVYAYVFEHRASTLSWPLWMGVPHGYEIEFIFGIPLDPS 462
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 29.3 bits (64), Expect = 0.54, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S + PLW+G P + IP DPS
Sbjct: 424 RVYAYVFEHRASTLSWPLWMGVPHGYEIEFIFGIPLDPS 462
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 29.3 bits (64), Expect = 0.55, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S + PLW+G P + IP DPS
Sbjct: 423 RVYAYVFEHRASTLSWPLWMGVPHGYEIEFIFGIPLDPS 461
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S + PLW+G P + IP DPS
Sbjct: 421 RVYAYVFEHRASTLSWPLWMGVPHGYEIEFIFGIPLDPS 459
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 76 RKSAYMKMLKSSAHTLPLWVGKPGQKPAALVGAIPADPS 114
R AY+ ++S + PLW+G P + IP DPS
Sbjct: 420 RVYAYVFEHRASTLSWPLWMGVPHGYEIEFIFGIPLDPS 458
>pdb|3K89|A Chain A, Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo0880(Fabd)
Complexed With Glycerol
pdb|3R97|A Chain A, Crystal Structure Of Malonyl-Coa:acyl Carrier Protein
Transacylase (Fabd), Xoo0880, From Xanthomonas Oryzae
Pv. Oryzae Kacc10331
Length = 314
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 61 NLFTLARITGCKEVMRKSAYMK--MLKSSAHTLPLWVGKPGQKPAALVG 107
+L+ L++ G +E++ ++ Y + +L + LW + GQ+PA L G
Sbjct: 45 DLWALSQ-GGPEEMLNRTEYTQPALLAAGVAVWRLWTAQRGQRPALLAG 92
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 27.3 bits (59), Expect = 2.5, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 13 SLYSRSPQPHNKSYLKFFVVGKAEL 37
S+Y P+ K+YLK VGK EL
Sbjct: 423 SVYDIEPELKEKTYLKLVCVGKDEL 447
>pdb|1U2R|A Chain A, Crystal Structure Of Adp-Ribosylated Ribosomal Translocase
From Saccharomyces Cerevisiae
pdb|1ZM2|A Chain A, Structure Of Adp-ribosylated Eef2 In Complex With
Catalytic Fragment Of Eta
pdb|1ZM2|C Chain C, Structure Of Adp-ribosylated Eef2 In Complex With
Catalytic Fragment Of Eta
pdb|1ZM2|E Chain E, Structure Of Adp-ribosylated Eef2 In Complex With
Catalytic Fragment Of Eta
pdb|1ZM3|A Chain A, Structure Of The Apo Eef2-Eta Complex
pdb|1ZM3|C Chain C, Structure Of The Apo Eef2-Eta Complex
pdb|1ZM3|E Chain E, Structure Of The Apo Eef2-Eta Complex
pdb|1ZM4|A Chain A, Structure Of The Eef2-Eta-Btad Complex
pdb|1ZM4|C Chain C, Structure Of The Eef2-Eta-Btad Complex
pdb|1ZM4|E Chain E, Structure Of The Eef2-Eta-Btad Complex
pdb|1ZM9|A Chain A, Structure Of Eef2-Eta In Complex With Pj34
pdb|1ZM9|C Chain C, Structure Of Eef2-Eta In Complex With Pj34
pdb|1ZM9|E Chain E, Structure Of Eef2-Eta In Complex With Pj34
pdb|2P8X|T Chain T, Fitted Structure Of Adpr-Eef2 In The 80s:adpr-Eef2:gdpnp
Cryo-Em Reconstruction
pdb|2P8Y|T Chain T, Fitted Structure Of Adpr-Eef2 In The 80s:adpr-
Eef2:gdp:sordarin Cryo-Em Reconstruction
pdb|2P8Z|T Chain T, Fitted Structure Of Adpr-Eef2 In The 80s:adpr-
Eef2:gdpnp:sordarin Cryo-Em Reconstruction
pdb|3B78|A Chain A, Structure Of The Eef2-Exoa(R551h)-Nad+ Complex
pdb|3B78|C Chain C, Structure Of The Eef2-Exoa(R551h)-Nad+ Complex
pdb|3B78|E Chain E, Structure Of The Eef2-Exoa(R551h)-Nad+ Complex
pdb|3B82|A Chain A, Structure Of The Eef2-Exoa(E546h)-Nad+ Complex
pdb|3B82|C Chain C, Structure Of The Eef2-Exoa(E546h)-Nad+ Complex
pdb|3B82|E Chain E, Structure Of The Eef2-Exoa(E546h)-Nad+ Complex
pdb|3B8H|A Chain A, Structure Of The Eef2-Exoa(E546a)-Nad+ Complex
pdb|3B8H|C Chain C, Structure Of The Eef2-Exoa(E546a)-Nad+ Complex
pdb|3B8H|E Chain E, Structure Of The Eef2-Exoa(E546a)-Nad+ Complex
pdb|2ZIT|A Chain A, Structure Of The Eef2-Exoa-Nad+ Complex
pdb|2ZIT|C Chain C, Structure Of The Eef2-Exoa-Nad+ Complex
pdb|2ZIT|E Chain E, Structure Of The Eef2-Exoa-Nad+ Complex
Length = 842
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 7 QNETEKSLYSRSPQPHNKSYLK 28
++E+ ++ S+SP HN+ YLK
Sbjct: 568 ESESSQTALSKSPNKHNRIYLK 589
>pdb|1N0V|C Chain C, Crystal Structure Of Elongation Factor 2
pdb|1N0V|D Chain D, Crystal Structure Of Elongation Factor 2
pdb|1N0U|A Chain A, Crystal Structure Of Yeast Elongation Factor 2 In Complex
With Sordarin
pdb|1S1H|T Chain T, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i.
pdb|2E1R|A Chain A, Structure Of Eef2 In Complex With A Sordarin Derivative
pdb|2NPF|A Chain A, Structure Of Eef2 In Complex With Moriniafungin
pdb|2NPF|B Chain B, Structure Of Eef2 In Complex With Moriniafungin
pdb|2P8W|T Chain T, Fitted Structure Of Eef2 In The 80s:eef2:gdpnp Cryo-Em
Reconstruction
pdb|3DNY|T Chain T, Fitting Of The Eef2 Crystal Structure Into The Cryo-Em
Density Map Of The Eef2.80s.Alf4-.Gdp Complex
Length = 842
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 7 QNETEKSLYSRSPQPHNKSYLK 28
++E+ ++ S+SP HN+ YLK
Sbjct: 568 ESESSQTALSKSPNKHNRIYLK 589
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,484,344
Number of Sequences: 62578
Number of extensions: 117615
Number of successful extensions: 312
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 282
Number of HSP's gapped (non-prelim): 31
length of query: 118
length of database: 14,973,337
effective HSP length: 81
effective length of query: 37
effective length of database: 9,904,519
effective search space: 366467203
effective search space used: 366467203
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 45 (21.9 bits)