BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11718
         (65 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O01346|EGH_DROME Beta-1,4-mannosyltransferase egh OS=Drosophila melanogaster GN=egh
           PE=2 SV=1
          Length = 457

 Score =  116 bits (290), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/63 (76%), Positives = 59/63 (93%)

Query: 2   KVSAEKQVSFDNGLDGSVAEDCYFAMLAYKQGFSFNFVEGEMWEKSPFSLWDFVQQRKRW 61
           +VSAE+ VSFDNG+DGSVAEDC+FAM A+ QG++FNF+EGEM+EKSPF+L DF+QQRKRW
Sbjct: 267 QVSAERSVSFDNGIDGSVAEDCFFAMRAFSQGYTFNFIEGEMYEKSPFTLLDFLQQRKRW 326

Query: 62  LQG 64
           LQG
Sbjct: 327 LQG 329


>sp|Q03562|BRE3_CAEEL Beta-1,4-mannosyltransferase bre-3 OS=Caenorhabditis elegans
           GN=bre-3 PE=2 SV=2
          Length = 455

 Score =  107 bits (267), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/63 (66%), Positives = 58/63 (92%)

Query: 2   KVSAEKQVSFDNGLDGSVAEDCYFAMLAYKQGFSFNFVEGEMWEKSPFSLWDFVQQRKRW 61
           +V AE+ VS+D+G++GS+AEDC+F+M+A K G+SF+F+EGEM EKSPF++WDF+QQRKRW
Sbjct: 267 QVEAERDVSYDHGMEGSIAEDCFFSMVAMKHGYSFDFIEGEMHEKSPFTMWDFLQQRKRW 326

Query: 62  LQG 64
           LQG
Sbjct: 327 LQG 329


>sp|A8XAC4|BRE3_CAEBR Beta-1,4-mannosyltransferase bre-3 OS=Caenorhabditis briggsae
           GN=bre-3 PE=3 SV=1
          Length = 455

 Score =  106 bits (265), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/63 (65%), Positives = 58/63 (92%)

Query: 2   KVSAEKQVSFDNGLDGSVAEDCYFAMLAYKQGFSFNFVEGEMWEKSPFSLWDFVQQRKRW 61
           +V AE+ VS+D+G++GS+AEDC+F+M+A K G++F+F+EGEM EKSPF++WDF+QQRKRW
Sbjct: 267 QVEAERDVSYDHGMEGSIAEDCFFSMVAMKHGYTFDFIEGEMHEKSPFTMWDFLQQRKRW 326

Query: 62  LQG 64
           LQG
Sbjct: 327 LQG 329


>sp|P96587|YDAM_BACSU Uncharacterized glycosyltransferase YdaM OS=Bacillus subtilis
           (strain 168) GN=ydaM PE=3 SV=1
          Length = 420

 Score = 29.6 bits (65), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 16  DGSVAEDCYFAMLAYKQGFSFNFVEGEM-WEKSPFSLWDFVQQRKRWLQG 64
           D ++AED    +  Y  G+   F    + WE+ P +   + +QR RW +G
Sbjct: 230 DKALAEDTELTIRVYNLGYHIRFFPAAITWEQEPETWKVWWRQRTRWARG 279


>sp|P87073|CHS1_PHYB8 Chitin synthase 1 OS=Phycomyces blakesleeanus (strain ATCC 8743b /
           FGSC 10004 / NBRC 33097 / NRRL 1555) GN=chs1 PE=3 SV=1
          Length = 841

 Score = 29.6 bits (65), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 19  VAED---CYFAMLAYKQGFSFNFVEGEMWEKS-PFSLWDFVQQRKRWLQG 64
           +AED   CY  +   K  +  ++V     E   P S+ +F+ QR+RWL G
Sbjct: 438 LAEDRILCYELVAKKKANWVLHYVSSSYGETDVPDSVPEFISQRRRWLNG 487


>sp|Q9U720|DCSA_DICDI Cellulose synthase catalytic subunit A [UDP-forming]
           OS=Dictyostelium discoideum GN=dcsA PE=1 SV=1
          Length = 1059

 Score = 29.3 bits (64), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 6   EKQVSFDNG--LDGSVAEDCYFAMLAYKQGF-SFNFVEGEMWEKSPFSLWDFVQQRKRWL 62
            +Q  +D G  +  SV ED Y  M     G+ S+   E  +   +P  L + ++QRKRW 
Sbjct: 699 RRQPLYDIGGIMYNSVTEDMYTGMKLQVSGYKSWYHNEVLVVGTAPVDLKETLEQRKRWA 758

Query: 63  QG 64
           QG
Sbjct: 759 QG 760


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.135    0.439 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,097,230
Number of Sequences: 539616
Number of extensions: 702369
Number of successful extensions: 1238
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1235
Number of HSP's gapped (non-prelim): 6
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)