BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1172
(276 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 84/104 (80%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR 76
G +PYPIIAD+ R LAV+LGM+DP E+ S GMPLTCRAVFII P KKL+LS LYPATTGR
Sbjct: 92 GDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGR 151
Query: 77 NFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSE 120
NF EILRV+DSLQLT KKVATP DW+ G V PG+ +++++
Sbjct: 152 NFSEILRVIDSLQLTAQKKVATPADWQPGDRCMVVPGVSAEEAK 195
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
WG+LFSHP DFTPV TTEL RV+QL +F++R K+IALSCD+V H +W
Sbjct: 31 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEW 80
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
Query: 4 QDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKK 63
+DI +Y+S E KLP+PII D++R LA+ LGMLDP EKD KGMP+T R VF+ P KK
Sbjct: 84 KDINAYNSE-EPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKK 142
Query: 64 LRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
L+LS LYPATTGRNFDEILRV+ SLQLT K+VATPVDWK G + V P + ++++ KL
Sbjct: 143 LKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAK-KL 201
Query: 124 TCKPIFSR 131
K +F++
Sbjct: 202 FPKGVFTK 209
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 159 LPGCSLLG-----CQASLVILECSIPAF----WGILFSHPSDFTPVCTTELARVLQLIKE 209
+PG LLG +A+ + F WGILFSHP DFTPV TTEL R +L E
Sbjct: 1 MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVXTTELGRAAKLAPE 60
Query: 210 FEQRTCKVIALSCDSVESHHDWIK 233
F +R K+IALS DSVE H W K
Sbjct: 61 FAKRNVKLIALSIDSVEDHLAWSK 84
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Query: 2 FLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPA 61
+++DI+ Y K PI+ D+ R LA +L ++D EKD G+PLTCR +F I P
Sbjct: 82 WIEDIKYYGKLN----KWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPE 137
Query: 62 KKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGL----VSK 117
KK++ + LYPATTGRN EILRVL SLQLT T VATPV+W G + V P L +SK
Sbjct: 138 KKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCCVIPTLQDDEISK 197
Query: 118 DSEGKLT 124
+ ++T
Sbjct: 198 HFKNEIT 204
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235
W ILFSHP+DFTPVCTTELA + ++ ++F + CK+I SC+S ESH WI+ +
Sbjct: 33 WAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDI 86
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 13/143 (9%)
Query: 2 FLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPA 61
+++DI+ Y K PI+ D+ R LA +L ++D EKD G+PLTCR +F I P
Sbjct: 82 WIEDIKYYGKLN----KWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPE 137
Query: 62 KKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGL----VSK 117
KK++ + LYPATTGRN EILRVL SLQLT T VATPV+W G + V P L +SK
Sbjct: 138 KKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCCVIPTLQDDEISK 197
Query: 118 DSEGKLT-----CKPIFSRIVSL 135
+ ++T K + R V+L
Sbjct: 198 HFKNEITKVEMPSKKKYLRFVNL 220
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235
W ILFSHP+DFTPV TTELA + ++ ++F + CK+I SC+S ESH WI+ +
Sbjct: 33 WAILFSHPNDFTPVXTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDI 86
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 95 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTXLYYPXELGRL 149
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 150 VDEILRIVKALKLGDSLKRAVPADW 174
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPVCTTE + ++F++ +I LS DSV SH W + + R
Sbjct: 35 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 90
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 96 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTXLYYPXELGRL 150
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 151 VDEILRIVKALKLGDSLKRAVPADW 175
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPV TTE + ++F++ +I LS DSV SH W + + R
Sbjct: 36 WFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 91
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 96 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTMLYYPMELGRL 150
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 151 VDEILRIVKALKLGDSLKRAVPADW 175
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPVCTTE + ++F++ +I LS DSV SH W + + R
Sbjct: 36 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 91
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 96 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTMLYYPMELGRL 150
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 151 VDEILRIVKALKLGDSLKRAVPADW 175
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPV TTE + ++F++ +I LS DSV SH W + + R
Sbjct: 36 WFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 91
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 95 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTMLYYPMELGRL 149
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 150 VDEILRIVKALKLGDSLKRAVPADW 174
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPV TTE + ++F++ +I LS DSV SH W + + R
Sbjct: 35 WFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 90
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 95 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTMLYYPMELGRL 149
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 150 VDEILRIVKALKLGDSLKRAVPADW 174
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPVCTTE + ++F++ +I LS DSV SH W + + R
Sbjct: 35 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 90
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 95 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTMLYYPMELGRL 149
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 150 VDEILRIVKALKLGDSLKRAVPADW 174
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPV TTE + ++F++ +I LS DSV SH W + + R
Sbjct: 35 WFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 90
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77
++P+PIIAD ++A +LG+L ++ T R VFI+D +R YP GR
Sbjct: 95 RIPFPIIADPQGTVARRLGLLH-----AESATHTVRGVFIVDARGVIRTMLYYPMELGRL 149
Query: 78 FDEILRVLDSLQLTDTKKVATPVDW 102
DEILR++ +L+L D+ K A P DW
Sbjct: 150 VDEILRIVKALKLGDSLKRAVPADW 174
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237
W +LFSHP+DFTPVCTTE + ++F++ +I LS DSV SH W + + R
Sbjct: 35 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIER 90
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G P +AD+ +++A G+LD +DS + R VFIIDP KLR +
Sbjct: 96 GLGPXAIPXLADKTKAIARAYGVLD---EDSG---VAYRGVFIIDPNGKLRQIIINDXPI 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
GRN +E++R++++LQ + P +WK G
Sbjct: 150 GRNVEEVIRLVEALQFVEEHGEVCPANWKKG 180
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
+LF +P DFT VC TE+ + K F + +VI+ SCDS SH W
Sbjct: 40 VLFFYPXDFTFVCPTEIIQFSDDAKRFAEINTEVISCSCDSEYSHLQW 87
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P++AD+ + ++ G+ D E+D R +FIIDP LR L
Sbjct: 126 GLGHMKIPLLADRKQEISKAYGVFD--EEDGNAF----RGLFIIDPNGILRQITLNDKPV 179
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR+LD+ Q + PV+WK G
Sbjct: 180 GRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQH 212
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
+LF +P+DFT VC TE+ ++EF R C+VIA S DS SH W
Sbjct: 70 VLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAW 117
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + PI+AD+ +++A G+L+ +S+G + R +FIIDP LR +
Sbjct: 116 GLGTMAIPILADKTKNIARSYGVLE----ESQG--VAYRGLFIIDPHGMLRQITVNDMPV 169
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
GR+ +E+LR+L++ Q + P +WK G
Sbjct: 170 GRSVEEVLRLLEAFQFVEKHGEVCPANWKKG 200
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
W +LF +P DFT VC TE+ + F + C+V+A S DS +H W + L
Sbjct: 58 WVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGL 117
Query: 242 GLL-INLSVDDFKEVEGRSRRFQESLNTYGYLGTYV 276
G + I + D K + RS E Y G ++
Sbjct: 118 GTMAIPILADKTKNI-ARSYGVLEESQGVAYRGLFI 152
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P++AD+ + ++ G+ D E+D R +FIIDP LR +
Sbjct: 129 GLGHMKIPLLADRKQEISKAYGVFD--EEDGNAF----RGLFIIDPNGILRQITINDKPV 182
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR+LD+ Q + PV+WK G
Sbjct: 183 GRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQH 215
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
+LF +P+DFT VC TE+ ++EF R C+VIA S DS SH W
Sbjct: 73 VLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAW 120
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P++AD+ + ++ G+ D E+D R +FIIDP LR +
Sbjct: 126 GLGHMKIPLLADRKQEISKAYGVFD--EEDGNAF----RGLFIIDPNGILRQITINDKPV 179
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR+LD+ Q + PV+WK G
Sbjct: 180 GRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQH 212
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
+LF +P+DFT VC TE+ ++EF R C+VIA S DS SH W
Sbjct: 70 VLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAW 117
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P++AD + SL+ G+L +E++ + R +FIIDP +R +
Sbjct: 112 GLGPINIPLLADTNHSLSRDYGVL--IEEEG----VALRGLFIIDPKGVIRHITINDLPV 165
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
GRN DE LR++++ Q TD P +W G
Sbjct: 166 GRNVDEALRLVEAFQWTDKNGTVLPCNWTPG 196
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G++ PI+AD+ + + G+L K+ G + R +FIIDP + LR +
Sbjct: 96 GLGQMNIPILADKTKCIMKSYGVL----KEEDG--VAYRGLFIIDPKQNLRQITVNDLPV 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
GR+ DE LR++ + Q + P +WK G
Sbjct: 150 GRDVDEALRLVKAFQFVEKHGEVCPANWKPG 180
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
W +LF +P DFT VC TE+ + +KEF C+V+A S DS SH W
Sbjct: 38 WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAW 87
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D R++A G+L E ++ R +FIID LR +
Sbjct: 96 GLGPMNIPLVSDPKRTIAQDYGVLKADEG------ISFRGLFIIDDKGILRQITINDLPV 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSE 120
GR+ DEILR++ + Q TD P WK G + ++P V+K E
Sbjct: 150 GRSVDEILRLVQAFQFTDKHGEVCPAGWKPGSDT-IKPD-VNKSKE 193
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGL 243
+ F +P DFT V TE+ +EF++ C+VI S DS H WI + LG
Sbjct: 40 VFFFYPLDFTFVSPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGP 99
Query: 244 L 244
+
Sbjct: 100 M 100
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D R++A G+L E ++ R +FIID LR +
Sbjct: 96 GLGPMNIPLVSDPKRTIAQDYGVLKADEG------ISFRGLFIIDDKGILRQITINDLPV 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSE 120
GR+ DEILR++ + Q TD P WK G + ++P V+K E
Sbjct: 150 GRSVDEILRLVQAFQFTDKHGEVCPAGWKPGSDT-IKPD-VNKSKE 193
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGL 243
+ F +P DFT VC TE+ +EF++ C+VI S DS SH WI + LG
Sbjct: 40 VFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFSHLAWINTPKKQGGLGP 99
Query: 244 L 244
+
Sbjct: 100 M 100
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
P W ++F P DFT VC TE+A +L EFE R +++ +S DS +H W
Sbjct: 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQW 96
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 19 LPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNF 78
LP+P ++D R L+ G+L+ + G+ R FI+DP +++ + GRN
Sbjct: 106 LPFPXLSDIKRELSQAAGVLN-----ADGV--ADRVTFIVDPNNEIQFVSATAGSVGRNV 158
Query: 79 DEILRVLDSLQ 89
DE+LRVLD+LQ
Sbjct: 159 DEVLRVLDALQ 169
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D R++A G+L E ++ R +FIID LR +
Sbjct: 96 GLGPMNIPLVSDPKRTIAQDYGVLKADEG------ISFRGLFIIDDKGILRQITVNDLPV 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR++ + Q TD +P WK G +
Sbjct: 150 GRSVDETLRLVQAFQFTDKHGEVSPAGWKPGSD 182
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGL 243
+ F +P DFT V TE+ +EF++ +VI S DS H +W+ + LG
Sbjct: 40 VFFFYPLDFTFVDPTEIIAFSDRAEEFKKLNSQVIGASVDSHFEHLEWVNTPKKQGGLGP 99
Query: 244 L 244
+
Sbjct: 100 M 100
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D R++A G+L E ++ R +FIID LR +
Sbjct: 96 GLGPMNIPLVSDPKRTIAQDYGVLKADEG------ISFRGLFIIDDKGILRQITVNDLPV 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR++ + Q TD +P WK G +
Sbjct: 150 GRSVDETLRLVQAFQFTDKHGEVSPAGWKPGSD 182
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGL 243
+ F +P DFT VC TE+ +EF++ +VI S DS H W+ + LG
Sbjct: 40 VFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNSQVIGASVDSHFEHLAWVNTPKKQGGLGP 99
Query: 244 L 244
+
Sbjct: 100 M 100
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 175 ECSIPAFWG---ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
E S+ F G +LF +P DFT VC TE+ EF C+V+A+S DS SH W
Sbjct: 48 EISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAW 107
Query: 232 IKALVRDCILGLL 244
I ++ LG +
Sbjct: 108 INTPRKNGGLGHM 120
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + +++D + ++ G+L +G L R +FIIDP ++ +
Sbjct: 116 GLGHMNIALLSDLTKQISRDYGVL------LEGPGLALRGLFIIDPNGVIKHLSVNDLPV 169
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDW 102
GR+ +E LR++ + Q + +P +W
Sbjct: 170 GRSVEETLRLVKAFQFVEAHGEVSPANW 197
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G L P++AD R L+ G+L K +G + R +FIID LR +
Sbjct: 94 GLGPLNIPLLADVTRRLSEDYGVL----KTDEG--IAYRGLFIIDGKGVLRQITVNDLPV 147
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGL 114
GR+ DE LR++ + Q TD P WK G + ++P +
Sbjct: 148 GRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDT-IKPNV 186
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGL 243
+LF +P DFT V TE+ ++F + C+V+ +S DS +H WI ++ LG
Sbjct: 38 VLFFYPLDFTFVXPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGP 97
Query: 244 L 244
L
Sbjct: 98 L 98
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW- 231
+ E W + F +P+DFT VC TEL V +E ++ V ++S D+ +H W
Sbjct: 23 VTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWH 82
Query: 232 --------IK-ALVRDCILGLLINLSVDDFKEVEGRSRR 261
IK A++ D L N D+ +E EG + R
Sbjct: 83 SSSETIAKIKYAMIGDPTGALTRNF--DNMREDEGLADR 119
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 7 QSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRL 66
+++ S E K+ Y +I D +L + ++ +G L RA F++DP ++
Sbjct: 79 KAWHSSSETIAKIKYAMIGDPTGALTRNFDNM----REDEG--LADRATFVVDPQGIIQA 132
Query: 67 SFLYPATTGRNFDEILRVLDSLQLTDTK-KVATPVDWKVGMEIEVRPGL 114
+ GR+ ++LR + + Q +P WK G E + P L
Sbjct: 133 IEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVSPAKWKEG-EATLAPSL 180
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW- 231
+ E W + F +P+DFT VC TEL V +E ++ V ++S D+ +H W
Sbjct: 23 VTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWH 82
Query: 232 --------IK-ALVRDCILGLLINLSVDDFKEVEGRSRR 261
IK A++ D L N D+ +E EG + R
Sbjct: 83 SSSETIAKIKYAMIGDPTGALTRNF--DNMREDEGLADR 119
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 7 QSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRL 66
+++ S E K+ Y +I D +L + ++ +G L RA F++DP ++
Sbjct: 79 KAWHSSSETIAKIKYAMIGDPTGALTRNFDNM----REDEG--LADRATFVVDPQGIIQA 132
Query: 67 SFLYPATTGRNFDEILRVLDSLQLTDTKKVAT-PVDWKVGMEIEVRPGL 114
+ GR+ ++LR + + Q P WK G E + P L
Sbjct: 133 IEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEG-EATLAPSL 180
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + + +++D ++ ++ +L R +FIID +R +
Sbjct: 116 GIGNVEFTLVSDINKDISKNYNVL-------YDNSFALRGLFIIDKNGCVRHQTVNDLPI 168
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GRN E+LR +DS+ DT P++WK G +
Sbjct: 169 GRNVQEVLRTIDSIIHVDTSGEVCPINWKKGQK 201
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 166 GCQASLVILECSIPAFWG----ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS 221
G + I+ + +F G L +P ++T VC TE+ + IK+FE + +++ +S
Sbjct: 38 GLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGIS 97
Query: 222 CDSVESHHDW 231
DSV SH W
Sbjct: 98 VDSVYSHLAW 107
>pdb|3GKK|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
W +++ +P D TP CTTE L+ EF++ K++ +S DSV+SH ++
Sbjct: 37 WLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNF 86
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW- 231
+ E W + F +P+DFT VC TEL V +E ++ V ++S D+ H W
Sbjct: 23 VTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFDHKAWH 82
Query: 232 --------IK-ALVRDCILGLLINLSVDDFKEVEGRSRR 261
IK A++ D L N D+ +E EG + R
Sbjct: 83 SSSETIAKIKYAMIGDPTGALTRNF--DNMREDEGLADR 119
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 5 DIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKL 64
D +++ S E K+ Y +I D +L + ++ +G L RA F++DP +
Sbjct: 77 DHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNM----REDEG--LADRATFVVDPQGII 130
Query: 65 RLSFLYPATTGRNFDEILRVLDSLQLTDTKKVAT-PVDWKVGMEIEVRPGL 114
+ + GR+ ++LR + + Q P WK G E + P L
Sbjct: 131 QAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEG-EATLAPSL 180
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G++ +P++AD +S++ +L E+ + R F+ID K+R + +
Sbjct: 93 GIGQVSFPMVADITKSISRDYDVL--FEE-----AIALRGAFLIDKNMKVRHAVINDLPL 145
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
GRN DE+LR++D+L + P W+ G
Sbjct: 146 GRNADEMLRMVDALLHFEEHGEVCPAGWRKG 176
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
ILF P DFT VC TE+ + +K+F ++ VI +S DS + H W V +G
Sbjct: 37 ILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIG 95
>pdb|1S0U|A Chain A, Eif2gamma Apo
Length = 408
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 102 WKVGMEIEVRPGLVSKDSEGKLT-CKPIFSRIVSLFAEQNELQFAVPGGLI 151
+KVG EIE+RPG+ K +EG T KP+ ++IVSL A L+ A PGGLI
Sbjct: 241 FKVGDEIEIRPGI--KVTEGNKTFWKPLTTKIVSLAAGNTILRKAHPGGLI 289
>pdb|3SJZ|A Chain A, The Structure Of Aif2gamma Subunit Delta 41-45 From
Archaeon Sulfolobus Solfataricus Complexed With Gdp And
Gdpnp
Length = 409
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 102 WKVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI---DRFAAAL 158
+KV EI+V PGL + +GK++ +PIF++I S+ E + A PGGL+ +L
Sbjct: 241 FKVDQEIKVLPGL-RVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSL 299
Query: 159 LPGCSLLGCQASLVILECSIPAFWGILFSH 188
+LLG +L + +P W I +
Sbjct: 300 TKADNLLGSIITLA--DAEVPVLWNIRIKY 327
>pdb|2AHO|A Chain A, Structure Of The Archaeal Initiation Factor Eif2 Alpha-
Gamma Heterodimer From Sulfolobus Solfataricus Complexed
With Gdpnp
pdb|2PLF|A Chain A, The Structure Of Aif2gamma Subunit From The Archaeon
Sulfolobus Solfataricus In The Nucleotide-Free Form.
pdb|2QMU|A Chain A, Structure Of An Archaeal Heterotrimeric Initiation Factor
2 Reveals A Nucleotide State Between The Gtp And The Gdp
States
pdb|2QN6|A Chain A, Structure Of An Archaeal Heterotrimeric Initiation Factor
2 Reveals A Nucleotide State Between The Gtp And The Gdp
States
pdb|3V11|A Chain A, Structure Of The Ternary Initiation Complex
Aif2:gdpnp:methionylated Initiator Trna
Length = 414
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 102 WKVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI---DRFAAAL 158
+KV EI+V PGL + +GK++ +PIF++I S+ E + A PGGL+ +L
Sbjct: 246 FKVDQEIKVLPGL-RVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSL 304
Query: 159 LPGCSLLGCQASLVILECSIPAFWGILFSH 188
+LLG +L + +P W I +
Sbjct: 305 TKADNLLGSIITLA--DAEVPVLWNIRIKY 332
>pdb|2PMD|A Chain A, The Structures Of Aif2gamma Subunit From The Archaeon
Sulfolobus Solfataricus In The Gdp-Bound Form.
pdb|2PMD|B Chain B, The Structures Of Aif2gamma Subunit From The Archaeon
Sulfolobus Solfataricus In The Gdp-Bound Form.
pdb|3CW2|A Chain A, Crystal Structure Of The Intact Archaeal Translation
Initiation Factor 2 From Sulfolobus Solfataricus .
pdb|3CW2|B Chain B, Crystal Structure Of The Intact Archaeal Translation
Initiation Factor 2 From Sulfolobus Solfataricus .
pdb|3CW2|E Chain E, Crystal Structure Of The Intact Archaeal Translation
Initiation Factor 2 From Sulfolobus Solfataricus .
pdb|3CW2|F Chain F, Crystal Structure Of The Intact Archaeal Translation
Initiation Factor 2 From Sulfolobus Solfataricus .
pdb|3I1F|A Chain A, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus In Complex With Gpp(Ch2)p
pdb|3I1F|B Chain B, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus In Complex With Gpp(Ch2)p
pdb|3P3M|A Chain A, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus Complexed With Gtp
pdb|3P3M|B Chain B, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus Complexed With Gtp
pdb|3P3M|C Chain C, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus Complexed With Gtp
pdb|3P3M|D Chain D, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus Complexed With Gtp
pdb|3P3M|E Chain E, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus Complexed With Gtp
pdb|3P3M|F Chain F, Gamma-Subunit Of The Translation Initiation Factor 2 From
S. Solfataricus Complexed With Gtp
pdb|3QSY|A Chain A, Recognition Of The Methionylated Initiator Trna By The
Translation Initiation Factor 2 In Archaea
Length = 415
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 102 WKVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI---DRFAAAL 158
+KV EI+V PGL + +GK++ +PIF++I S+ E + A PGGL+ +L
Sbjct: 247 FKVDQEIKVLPGL-RVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSL 305
Query: 159 LPGCSLLGCQASLVILECSIPAFWGILFSH 188
+LLG +L + +P W I +
Sbjct: 306 TKADNLLGSIITLA--DAEVPVLWNIRIKY 333
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 151 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 204
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
GR+ DE LR++ + Q TD P WK G E + D GKL
Sbjct: 205 GRSVDETLRLVQAFQYTDKHGEVAPAGWKPGSET------IIPDPAGKL 247
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT VC TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 95 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 153
>pdb|3PEN|A Chain A, Structure Of Archaeal Initiation Factor Aif2gamma Subunit
Delta 37-47 From Sulfolobus Solfataricus In The
Gdp-Bound Form.
pdb|3SJY|A Chain A, The Structure Of Initiation Factor Aif2 Gamma Subunit
Delta 37-47 From Archaeon Sulfolobus Solfataricus
Complexed With Gdpcp
Length = 403
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 102 WKVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI---DRFAAAL 158
+KV EI+V PGL + +GK++ +PIF++I S+ E + A PGGL+ +L
Sbjct: 235 FKVDQEIKVLPGL-RVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSL 293
Query: 159 LPGCSLLGCQASLVILECSIPAFWGILFSH 188
+LLG +L + +P W I +
Sbjct: 294 TKADNLLGSIITLA--DAEVPVLWNIRIKY 321
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW- 231
+ E W + F +P+DFT VC TEL V +E ++ V ++S D+ H W
Sbjct: 23 VTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFVHKAWH 82
Query: 232 --------IK-ALVRDCILGLLINLSVDDFKEVEGRSRR 261
IK A++ D L N D+ +E EG + R
Sbjct: 83 SSSETIAKIKYAMIGDPTGALTRNF--DNMREDEGLADR 119
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 7 QSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRL 66
+++ S E K+ Y +I D +L + ++ +G L RA F++DP ++
Sbjct: 79 KAWHSSSETIAKIKYAMIGDPTGALTRNFDNM----REDEG--LADRATFVVDPQGIIQA 132
Query: 67 SFLYPATTGRNFDEILRVLDSLQLTDTKKVAT-PVDWKVGMEIEVRPGL 114
+ GR+ ++LR + + Q P WK G E + P L
Sbjct: 133 IEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEG-EATLAPSL 180
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 151 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 204
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
GR+ DE LR++ + Q TD P WK G E + D GKL
Sbjct: 205 GRSVDETLRLVQAFQYTDKHGEVAPAGWKPGSET------IIPDPAGKL 247
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT V TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 95 VFFFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 153
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW- 231
+ E W + F +P+DFT VC TEL V +E ++ V ++S D+ H W
Sbjct: 23 VTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFIHKAWH 82
Query: 232 --------IK-ALVRDCILGLLINLSVDDFKEVEGRSRR 261
IK A++ D L N D+ +E EG + R
Sbjct: 83 SSSETIAKIKYAMIGDPTGALTRNF--DNMREDEGLADR 119
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 7 QSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRL 66
+++ S E K+ Y +I D +L + ++ +G L RA F++DP ++
Sbjct: 79 KAWHSSSETIAKIKYAMIGDPTGALTRNFDNM----REDEG--LADRATFVVDPQGIIQA 132
Query: 67 SFLYPATTGRNFDEILRVLDSLQLTDTKKVAT-PVDWKVGMEIEVRPGL 114
+ GR+ ++LR + + Q P WK G E + P L
Sbjct: 133 IEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEG-EATLAPSL 180
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 143 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 196
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR++ + Q TD P WK G E
Sbjct: 197 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSE 229
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT VC TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 87 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 145
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 151 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 204
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
GR+ DE LR++ + Q TD P WK G E + D GKL
Sbjct: 205 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET------IIPDPAGKL 247
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT VC TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 95 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 153
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 143 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 196
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR++ + Q TD P WK G E
Sbjct: 197 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSE 229
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT VC TE+ ++EF +V+A S DS H WI R LG
Sbjct: 87 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFEHLAWINTPRRQGGLG 145
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 108 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 161
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
GR+ DE LR++ + Q TD P WK G E + D GKL
Sbjct: 162 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET------IIPDPAGKL 204
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT VC TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 52 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 110
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + +G T R +FIID LR +
Sbjct: 137 GLGPMKIPLLSDLTHQISKDYG----VYLEDQGH--TLRGLFIIDEKGVLRQITMNDLPV 190
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
GR+ DE LR++ + Q TD P WK G + + D GKL
Sbjct: 191 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSDT------IIPDPSGKL 233
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWI 232
+ F +P DFT VC TE+ + EF +V+A S DS +H WI
Sbjct: 81 VFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWI 129
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 151 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 204
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
GR+ DE LR++ + Q TD P WK G E + D GKL
Sbjct: 205 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET------IIPDPAGKL 247
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT VC TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 95 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 153
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + P+++D ++ G V + G T R +FIID LR L
Sbjct: 143 GLGPIRIPLLSDLTHQISKDYG----VYLEDSGH--TLRGLFIIDDKGILRQITLNDLPV 196
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR++ + Q TD P WK G E
Sbjct: 197 GRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSE 229
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242
+ F +P DFT V TE+ ++EF +V+A S DS +H WI R LG
Sbjct: 87 VFFFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 145
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW- 231
+ E W + F +P+DFT V TEL V +E ++ V ++S D+ +H W
Sbjct: 23 VTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWH 82
Query: 232 --------IK-ALVRDCILGLLINLSVDDFKEVEGRSRR 261
IK A++ D L N D+ +E EG + R
Sbjct: 83 SSSETIAKIKYAMIGDPTGALTRNF--DNMREDEGLADR 119
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 7 QSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRL 66
+++ S E K+ Y +I D +L + ++ +G L RA F++DP ++
Sbjct: 79 KAWHSSSETIAKIKYAMIGDPTGALTRNFDNM----REDEG--LADRATFVVDPQGIIQA 132
Query: 67 SFLYPATTGRNFDEILRVLDSLQLTDTKKVAT-PVDWKVGMEIEVRPGL 114
+ GR+ ++LR + + Q P WK G E + P L
Sbjct: 133 IEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEG-EATLAPSL 180
>pdb|2D74|A Chain A, Crystal Structure Of Translation Initiation Factor
Aif2betagamma Heterodimer
pdb|2DCU|A Chain A, Crystal Structure Of Translation Initiation Factor
Aif2betagamma Heterodimer With Gdp
Length = 419
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 103 KVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
KVG EIE+RPG V + G++ +PI + IVSL A ++ A PGGL+
Sbjct: 245 KVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
>pdb|1KK0|A Chain A, Structure Of The Large Gamma Subunit Of Initiation Factor
Eif2 From Pyrococcus Abyssi
Length = 410
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 103 KVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
KVG EIE+RPG V + G++ +PI + IVSL A ++ A PGGL+
Sbjct: 244 KVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 291
>pdb|1KJZ|A Chain A, Structure Of The Large Gamma Subunit Of Initiation Factor
Eif2 From Pyrococcus Abyssi-G235d Mutant
pdb|1KK1|A Chain A, Structure Of The Large Gamma Subunit Of Initiation Factor
Eif2 From Pyrococcus Abyssi-G235d Mutant Complexed With
Gdpnp-Mg2+
pdb|1KK2|A Chain A, Structure Of The Large Gamma Subunit Of Initiation Factor
Eif2 From Pyrococcus Abyssi-G235d Mutant Complexed With
Gdp-Mg2+
Length = 410
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 103 KVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
KVG EIE+RPG V + G++ +PI + IVSL A ++ A PGGL+
Sbjct: 244 KVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 291
>pdb|1KK3|A Chain A, Structure Of The Wild-Type Large Gamma Subunit Of
Initiation Factor Eif2 From Pyrococcus Abyssi Complexed
With Gdp-Mg2+
Length = 410
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 103 KVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
KVG EIE+RPG V + G++ +PI + IVSL A ++ A PGGL+
Sbjct: 244 KVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 291
>pdb|3GKN|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
pdb|3GKN|B Chain B, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
Length = 163
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
W +++ +P D TP TTE L+ EF++ K++ +S DSV+SH ++
Sbjct: 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNF 86
>pdb|3GKM|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
W +++ +P D TP TTE L+ EF++ K++ +S DSV+SH ++
Sbjct: 37 WLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNF 86
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + + +I+D +S+A +L + RA +ID ++ +
Sbjct: 91 GIGNIKHTLISDISKSIARSYDVL-------FNESVALRAFVLIDKQGVVQHLLVNNLAL 143
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DEILR++D+LQ + P +W+ G E
Sbjct: 144 GRSVDEILRLIDALQHHEKYGDVCPANWQKGKE 176
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 175 ECSIPAFWG----ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHD 230
E S+ F G +L+ +P DFT VC +E+ + + + F++R +++ S DS +H
Sbjct: 22 EVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLA 81
Query: 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRR--FQESL 266
W K + +G + + + D + RS F ES+
Sbjct: 82 WKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESV 119
>pdb|3IXR|A Chain A, Crystal Structure Of Xylella Fastidiosa Prxq C47s Mutant
Length = 179
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228
W +L+ +P D TP +TE L+ +FEQ V+ +S DSV+SH
Sbjct: 53 WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSH 99
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 173 ILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
+ E + W I+ +P+DF+ VC TEL V + E ++ +V ++S D+ H W
Sbjct: 24 VTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAW 82
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 175 ECSIPAFWG----ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHD 230
E ++ F G +L+ +P DFT VC +E+ + + + F +R +++ S DS +H
Sbjct: 43 EVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLA 102
Query: 231 WIK 233
W K
Sbjct: 103 WKK 105
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G + + +++D +S++ +L DS ++ RA +ID ++ +
Sbjct: 112 GIGNIKHTLLSDITKSISKDYNVL---FDDS----VSLRAFVLIDMNGIVQHLLVNNLAI 164
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRP 112
GR+ DEILR++D++Q + P +W+ G ++ ++P
Sbjct: 165 GRSVDEILRIIDAIQHHEKYGDVCPANWQKG-KVSMKP 201
>pdb|4GQC|A Chain A, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|B Chain B, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|C Chain C, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|D Chain D, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
Length = 164
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 183 GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224
+L P+ F+PVCT EL + + E+ +V+A+S DS
Sbjct: 36 AVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDS 77
>pdb|2CX3|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX4|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|E Chain E, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|F Chain F, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|G Chain G, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|H Chain H, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|4GQF|A Chain A, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
pdb|4GQF|B Chain B, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
Length = 164
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 183 GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224
+L P+ F+PVCT EL + E+ +V+A+S DS
Sbjct: 36 AVLIFFPAAFSPVCTKELCTFRDKXAQLEKANAEVLAISVDS 77
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 30/76 (39%)
Query: 156 AALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTC 215
A P +L LV L A +L P FT +C EL ++ + EFE
Sbjct: 5 GATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDS 64
Query: 216 KVIALSCDSVESHHDW 231
+A+S +H W
Sbjct: 65 AALAISVGPPPTHKIW 80
>pdb|3DRN|A Chain A, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
pdb|3DRN|B Chain B, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
Length = 161
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 5 DIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKL 64
DI S+ E KLP+ +++D D+ + G +KG L R F+ID +
Sbjct: 73 DINSHKRFKEK-YKLPFILVSDPDKKIRELYG--------AKGFILPARITFVIDKKGII 123
Query: 65 RLSFLYPATTGRNFDEILRVLDSLQ 89
R + + +E L+ L ++
Sbjct: 124 RHIYNSQMNPANHVNEALKALKQIK 148
>pdb|2YWN|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Sulfolobus Tokodaii
pdb|4G2E|A Chain A, Crystal Structure Of A Dimeric Prxq From Sulfolobus
Tokodaii
Length = 157
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMP---LTCRAVFIIDPAKKLRLSFLYPAT 73
KL + I++D +R + + V + +P L RAVF+ID K+R ++
Sbjct: 85 NKLNFTILSDYNREVVKKYN----VAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDP 140
Query: 74 TGR-NFDEILRVLDSL 88
T +DEI +V+ SL
Sbjct: 141 TKEPPYDEIEKVVKSL 156
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223
+L +P+ FT VCT E+ + +F Q V+ +S D
Sbjct: 34 VLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD 73
>pdb|2LB5|A Chain A, Refined Structural Basis For The Photoconversion Of A
Phytochrome To The Activated Far-Red Light-Absorbing
Form
pdb|2LB9|A Chain A, Refined Solution Structure Of A Cyanobacterial Phytochrome
Gaf Domain In The Red Light-Absorbing Ground State
(Corrected Pyrrole Ring Planarity)
Length = 208
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 165 LGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKE 209
+G +SLV+ WG+L SH ++ P EL +V+QL+ +
Sbjct: 146 MGVASSLVVPLMHHQELWGLLVSHHAEPRPYSQEEL-QVVQLLAD 189
>pdb|4F2V|A Chain A, Crystal Structure Of De Novo Designed Serine Hydrolase,
Northeast Structural Genomics Consortium (Nesg) Target
Or165
pdb|4F2V|B Chain B, Crystal Structure Of De Novo Designed Serine Hydrolase,
Northeast Structural Genomics Consortium (Nesg) Target
Or165
Length = 272
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 70 YPATTGRNFDEILRVLDSLQLT-DTKKVATPVDWKVGMEIEVRPGLVSKD------SEGK 122
+P GR+ D+I VL+ L+ D++++ W VG E++ S ++GK
Sbjct: 101 WPTPDGRHIDQITTVLNQLKNDPDSRRIIVSA-WNVG-ELDKXANAPSHAFFQFYVADGK 158
Query: 123 LTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
L+C+ +++R +F L FA+ G +
Sbjct: 159 LSCQ-LYARSEDVFL---SLPFAIASGAL 183
>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase
pdb|2GAS|B Chain B, Crystal Structure Of Isoflavone Reductase
Length = 307
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 54 AVFIIDPAKKLRLSFLYPATTGRNFDEILR 83
AV+ IDPAK + S YP T DE L
Sbjct: 275 AVYEIDPAKDIEASEAYPDVTYTTADEYLN 304
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,142,208
Number of Sequences: 62578
Number of extensions: 310530
Number of successful extensions: 778
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 642
Number of HSP's gapped (non-prelim): 115
length of query: 276
length of database: 14,973,337
effective HSP length: 97
effective length of query: 179
effective length of database: 8,903,271
effective search space: 1593685509
effective search space used: 1593685509
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)