Query psy1172
Match_columns 276
No_of_seqs 364 out of 2831
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 17:12:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 100.0 1.6E-31 5.5E-36 230.1 7.5 110 1-123 102-211 (216)
2 1xcc_A 1-Cys peroxiredoxin; un 100.0 4.3E-30 1.5E-34 222.5 9.9 130 1-134 81-219 (220)
3 3tue_A Tryparedoxin peroxidase 100.0 2.1E-30 7.2E-35 223.6 7.0 103 1-113 106-208 (219)
4 1prx_A HORF6; peroxiredoxin, h 100.0 1.5E-29 5E-34 219.7 12.1 131 1-135 81-223 (224)
5 2v2g_A Peroxiredoxin 6; oxidor 100.0 7.8E-30 2.7E-34 222.8 10.1 130 1-135 79-218 (233)
6 3a2v_A Probable peroxiredoxin; 99.9 7.4E-28 2.5E-32 212.1 9.6 125 1-136 83-217 (249)
7 4g2e_A Peroxiredoxin; redox pr 99.9 2.8E-27 9.5E-32 193.9 6.5 109 152-270 3-111 (157)
8 3sbc_A Peroxiredoxin TSA1; alp 99.9 1.1E-26 3.7E-31 200.0 8.0 122 151-276 21-148 (216)
9 4gqc_A Thiol peroxidase, perox 99.9 2.6E-27 8.8E-32 195.7 1.8 107 152-268 4-112 (164)
10 3tue_A Tryparedoxin peroxidase 99.9 2.9E-26 1E-30 197.7 8.4 120 153-276 26-152 (219)
11 3mng_A Peroxiredoxin-5, mitoch 99.9 1.4E-25 4.8E-30 187.3 9.9 109 150-267 12-125 (173)
12 3uma_A Hypothetical peroxiredo 99.9 6.1E-25 2.1E-29 185.1 9.0 107 152-268 25-139 (184)
13 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 9.9E-25 3.4E-29 180.8 10.0 105 153-267 3-113 (167)
14 2xhf_A Peroxiredoxin 5; oxidor 99.9 5.1E-24 1.7E-28 177.4 9.6 107 153-268 14-124 (171)
15 1tp9_A Peroxiredoxin, PRX D (t 99.9 7E-24 2.4E-28 174.2 9.7 105 153-267 4-117 (162)
16 3ixr_A Bacterioferritin comigr 99.9 3.6E-24 1.2E-28 178.8 6.8 115 143-267 11-129 (179)
17 4f82_A Thioredoxin reductase; 99.9 1.6E-23 5.6E-28 174.9 9.4 108 152-268 9-130 (176)
18 1xiy_A Peroxiredoxin, pfaop; a 99.9 1.4E-23 4.7E-28 176.6 7.6 106 154-268 2-126 (182)
19 3tjj_A Peroxiredoxin-4; thiore 99.9 2.6E-23 8.8E-28 183.7 8.9 115 152-270 61-179 (254)
20 3drn_A Peroxiredoxin, bacterio 99.9 8.7E-23 3E-27 167.0 10.8 104 153-266 2-106 (161)
21 1nm3_A Protein HI0572; hybrid, 99.9 4.7E-23 1.6E-27 179.7 9.5 105 153-267 3-114 (241)
22 3gkn_A Bacterioferritin comigr 99.9 6.5E-23 2.2E-27 167.4 9.7 105 152-266 6-112 (163)
23 1psq_A Probable thiol peroxida 99.9 9.6E-23 3.3E-27 167.2 10.2 104 152-267 15-120 (163)
24 2c0d_A Thioredoxin peroxidase 99.9 1.1E-22 3.8E-27 175.9 10.6 109 153-265 25-139 (221)
25 2v2g_A Peroxiredoxin 6; oxidor 99.9 3.7E-23 1.3E-27 180.5 7.6 110 153-267 3-115 (233)
26 2a4v_A Peroxiredoxin DOT5; yea 99.9 5.9E-23 2E-27 167.5 8.2 106 152-268 6-113 (159)
27 1q98_A Thiol peroxidase, TPX; 99.9 9.8E-23 3.3E-27 167.6 8.7 103 153-267 17-121 (165)
28 2pwj_A Mitochondrial peroxired 99.9 9.3E-23 3.2E-27 169.4 8.6 107 152-268 6-126 (171)
29 2pn8_A Peroxiredoxin-4; thiore 99.9 6.5E-23 2.2E-27 176.0 7.8 112 152-267 18-133 (211)
30 3p7x_A Probable thiol peroxida 99.9 1.5E-22 5.2E-27 166.5 9.4 104 152-268 19-124 (166)
31 1prx_A HORF6; peroxiredoxin, h 99.9 1.9E-22 6.6E-27 174.8 9.6 111 152-267 4-119 (224)
32 3qpm_A Peroxiredoxin; oxidored 99.9 2.1E-22 7.2E-27 176.3 9.2 115 152-270 47-165 (240)
33 1n8j_A AHPC, alkyl hydroperoxi 99.9 2.4E-22 8.3E-27 168.8 9.2 108 154-267 2-112 (186)
34 3zrd_A Thiol peroxidase; oxido 99.9 1.7E-22 5.9E-27 172.0 8.2 105 152-268 51-157 (200)
35 2i81_A 2-Cys peroxiredoxin; st 99.9 3E-22 1E-26 172.1 9.4 116 147-266 15-136 (213)
36 3keb_A Probable thiol peroxida 99.9 5.3E-22 1.8E-26 171.8 10.4 102 152-268 21-129 (224)
37 3a2v_A Probable peroxiredoxin; 99.9 3.5E-22 1.2E-26 175.8 8.9 113 152-269 4-119 (249)
38 2yzh_A Probable thiol peroxida 99.9 8.2E-22 2.8E-26 162.7 10.2 104 152-268 20-125 (171)
39 4eo3_A Bacterioferritin comigr 99.9 3.8E-22 1.3E-26 181.9 8.9 106 157-276 2-107 (322)
40 1xcc_A 1-Cys peroxiredoxin; un 99.9 3.1E-22 1.1E-26 173.0 7.8 110 153-267 3-116 (220)
41 1uul_A Tryparedoxin peroxidase 99.9 7.5E-22 2.6E-26 167.6 9.2 112 152-267 5-121 (202)
42 1xvw_A Hypothetical protein RV 99.9 1.2E-21 4.3E-26 159.1 9.2 104 153-266 9-115 (160)
43 1qmv_A Human thioredoxin perox 99.9 9.5E-22 3.2E-26 166.2 8.7 112 152-267 4-119 (197)
44 2h01_A 2-Cys peroxiredoxin; th 99.9 1.6E-21 5.5E-26 164.0 9.6 109 154-266 1-115 (192)
45 1zye_A Thioredoxin-dependent p 99.8 3.6E-21 1.2E-25 166.0 11.0 112 152-267 26-141 (220)
46 4fo5_A Thioredoxin-like protei 99.8 2.4E-21 8.1E-26 154.7 7.5 110 152-270 6-117 (143)
47 1we0_A Alkyl hydroperoxide red 99.8 7.5E-21 2.6E-25 159.1 10.2 107 154-266 2-112 (187)
48 3ztl_A Thioredoxin peroxidase; 99.8 5.2E-21 1.8E-25 165.2 9.3 114 151-268 38-155 (222)
49 3tjj_A Peroxiredoxin-4; thiore 99.8 2.4E-21 8.1E-26 171.1 6.5 103 2-114 142-244 (254)
50 1zof_A Alkyl hydroperoxide-red 99.8 5.2E-21 1.8E-25 161.6 8.2 108 154-265 2-116 (198)
51 3ewl_A Uncharacterized conserv 99.8 2.2E-20 7.6E-25 148.4 9.5 107 154-269 2-112 (142)
52 2bmx_A Alkyl hydroperoxidase C 99.8 2.3E-20 7.9E-25 157.4 9.4 108 152-265 3-125 (195)
53 3qpm_A Peroxiredoxin; oxidored 99.8 1.6E-20 5.5E-25 164.3 8.7 107 2-118 128-234 (240)
54 3fw2_A Thiol-disulfide oxidore 99.8 9.9E-20 3.4E-24 146.4 11.3 111 152-269 4-119 (150)
55 2lrn_A Thiol:disulfide interch 99.8 1.2E-19 4.2E-24 146.2 11.5 108 153-268 3-111 (152)
56 3u5r_E Uncharacterized protein 99.8 3.8E-20 1.3E-24 159.1 8.4 106 152-268 31-145 (218)
57 3eur_A Uncharacterized protein 99.8 8.5E-20 2.9E-24 145.5 9.5 109 153-269 5-116 (142)
58 1xvq_A Thiol peroxidase; thior 99.8 1.3E-19 4.5E-24 150.3 10.4 103 152-267 17-120 (175)
59 2gs3_A PHGPX, GPX-4, phospholi 99.8 2.8E-19 9.5E-24 149.5 11.3 92 151-250 21-120 (185)
60 2jsy_A Probable thiol peroxida 99.8 4.3E-20 1.5E-24 151.3 6.2 103 152-267 17-122 (167)
61 3lwa_A Secreted thiol-disulfid 99.8 5.2E-19 1.8E-23 147.0 12.5 101 152-263 30-140 (183)
62 2p31_A CL683, glutathione pero 99.8 2E-19 6.9E-24 149.9 9.5 91 152-250 22-121 (181)
63 2lrt_A Uncharacterized protein 99.8 2.2E-19 7.4E-24 145.4 9.1 106 154-268 10-115 (152)
64 2k6v_A Putative cytochrome C o 99.8 2.5E-19 8.6E-24 146.6 9.3 106 152-266 9-122 (172)
65 2obi_A PHGPX, GPX-4, phospholi 99.8 4.4E-19 1.5E-23 147.8 10.7 97 150-254 18-124 (183)
66 2v1m_A Glutathione peroxidase; 99.8 5.9E-19 2E-23 144.0 11.3 95 152-254 4-109 (169)
67 2i3y_A Epididymal secretory gl 99.8 3.7E-19 1.3E-23 153.2 9.6 90 154-252 30-134 (215)
68 3kij_A Probable glutathione pe 99.8 6.3E-19 2.2E-23 146.6 10.5 89 154-250 13-110 (180)
69 1xzo_A BSSCO, hypothetical pro 99.8 5.2E-19 1.8E-23 145.1 9.8 95 152-254 6-110 (174)
70 2pn8_A Peroxiredoxin-4; thiore 99.8 3.1E-19 1.1E-23 153.0 8.5 95 18-118 111-205 (211)
71 3gl3_A Putative thiol:disulfid 99.8 1.4E-18 4.8E-23 139.3 11.7 104 153-268 3-107 (152)
72 3kcm_A Thioredoxin family prot 99.8 9.8E-19 3.4E-23 140.5 10.8 105 153-268 2-108 (154)
73 2vup_A Glutathione peroxidase- 99.8 3.4E-19 1.1E-23 149.6 8.1 97 146-250 15-120 (190)
74 1zye_A Thioredoxin-dependent p 99.8 2.3E-19 7.9E-24 154.7 7.3 98 17-123 118-215 (220)
75 2cvb_A Probable thiol-disulfid 99.8 8.2E-19 2.8E-23 146.4 9.6 105 152-268 6-118 (188)
76 1jfu_A Thiol:disulfide interch 99.8 1E-18 3.5E-23 145.4 10.1 105 150-265 31-138 (186)
77 3hcz_A Possible thiol-disulfid 99.8 6.7E-19 2.3E-23 140.0 8.5 107 153-268 5-113 (148)
78 3eyt_A Uncharacterized protein 99.8 2.5E-19 8.6E-24 144.8 6.1 106 155-268 2-119 (158)
79 2p5q_A Glutathione peroxidase 99.8 1.1E-18 3.6E-23 142.6 9.8 94 153-254 6-110 (170)
80 2f8a_A Glutathione peroxidase 99.8 8.9E-19 3E-23 149.9 9.7 97 154-252 21-126 (208)
81 3fkf_A Thiol-disulfide oxidore 99.8 1.6E-18 5.5E-23 137.8 10.3 111 152-269 4-117 (148)
82 2ggt_A SCO1 protein homolog, m 99.8 2.7E-18 9.3E-23 139.3 11.9 103 158-268 2-113 (164)
83 2f9s_A Thiol-disulfide oxidore 99.8 1.3E-18 4.4E-23 139.7 9.7 103 155-268 2-105 (151)
84 2r37_A Glutathione peroxidase 99.8 9.8E-19 3.3E-23 149.7 8.8 89 155-252 13-116 (207)
85 2ywi_A Hypothetical conserved 99.8 1.2E-18 4.1E-23 146.0 8.9 106 152-268 17-132 (196)
86 3lor_A Thiol-disulfide isomera 99.8 5.1E-19 1.7E-23 143.1 6.2 107 154-268 4-122 (160)
87 2b7k_A SCO1 protein; metalloch 99.8 2.7E-18 9.4E-23 145.5 10.5 105 153-265 13-127 (200)
88 2i81_A 2-Cys peroxiredoxin; st 99.8 1.2E-18 4.2E-23 149.4 8.4 93 18-117 115-207 (213)
89 1uul_A Tryparedoxin peroxidase 99.8 1.1E-18 3.9E-23 147.9 8.1 95 18-118 99-193 (202)
90 2l5o_A Putative thioredoxin; s 99.8 4.1E-18 1.4E-22 136.7 10.7 104 153-267 2-107 (153)
91 3cmi_A Peroxiredoxin HYR1; thi 99.8 2.8E-19 9.7E-24 147.3 3.8 89 155-252 8-105 (171)
92 2rli_A SCO2 protein homolog, m 99.8 5.1E-18 1.7E-22 138.8 11.3 101 160-268 7-116 (171)
93 3me7_A Putative uncharacterize 99.8 2.1E-18 7.1E-23 142.6 9.0 107 154-266 2-117 (170)
94 3raz_A Thioredoxin-related pro 99.7 1.6E-18 5.6E-23 139.4 7.9 97 158-263 4-100 (151)
95 3dwv_A Glutathione peroxidase- 99.7 3.6E-19 1.2E-23 149.2 2.9 91 152-250 19-118 (187)
96 3erw_A Sporulation thiol-disul 99.7 4.6E-18 1.6E-22 134.5 9.1 106 151-268 7-116 (145)
97 3or5_A Thiol:disulfide interch 99.7 9.7E-18 3.3E-22 136.0 10.8 100 152-263 7-107 (165)
98 3hdc_A Thioredoxin family prot 99.7 2.4E-18 8.1E-23 139.6 6.9 105 151-268 13-117 (158)
99 1qmv_A Human thioredoxin perox 99.7 3.3E-18 1.1E-22 144.4 7.5 92 18-115 97-188 (197)
100 3kh7_A Thiol:disulfide interch 99.7 9E-18 3.1E-22 139.3 9.4 104 150-268 27-134 (176)
101 3ia1_A THIO-disulfide isomeras 99.7 8E-18 2.7E-22 135.3 8.4 105 152-268 4-111 (154)
102 3ha9_A Uncharacterized thiored 99.7 5.2E-18 1.8E-22 138.3 7.0 103 153-269 11-133 (165)
103 2h01_A 2-Cys peroxiredoxin; th 99.7 6.6E-18 2.3E-22 141.8 6.3 93 17-116 93-185 (192)
104 4eo3_A Bacterioferritin comigr 99.7 1E-17 3.5E-22 152.6 7.7 123 17-149 75-207 (322)
105 2lja_A Putative thiol-disulfid 99.7 6.3E-17 2.1E-21 129.6 11.4 105 153-268 3-110 (152)
106 4hde_A SCO1/SENC family lipopr 99.7 5.9E-17 2E-21 134.1 11.5 94 154-252 7-107 (170)
107 1n8j_A AHPC, alkyl hydroperoxi 99.7 3.5E-17 1.2E-21 137.2 10.1 89 18-112 90-179 (186)
108 2b5x_A YKUV protein, TRXY; thi 99.7 1.6E-17 5.6E-22 131.7 7.3 102 154-267 2-111 (148)
109 2ls5_A Uncharacterized protein 99.5 9.8E-19 3.4E-23 141.7 0.0 103 152-265 6-111 (159)
110 1i5g_A Tryparedoxin II; electr 99.7 2.5E-17 8.6E-22 131.2 7.3 102 155-266 3-108 (144)
111 2hyx_A Protein DIPZ; thioredox 99.7 5.3E-17 1.8E-21 149.5 9.5 107 151-268 49-166 (352)
112 2c0d_A Thioredoxin peroxidase 99.7 3.3E-17 1.1E-21 141.5 7.0 91 18-115 119-209 (221)
113 1lu4_A Soluble secreted antige 99.7 1.2E-16 4.1E-21 125.1 9.5 98 157-267 2-100 (136)
114 3ztl_A Thioredoxin peroxidase; 99.7 7.9E-17 2.7E-21 138.9 8.9 91 17-113 131-221 (222)
115 1zzo_A RV1677; thioredoxin fol 99.7 1.5E-16 5.2E-21 124.1 9.2 99 156-267 2-102 (136)
116 1o8x_A Tryparedoxin, TRYX, TXN 99.7 9.5E-17 3.2E-21 128.3 7.4 101 154-265 3-107 (146)
117 2b1k_A Thiol:disulfide interch 99.7 2E-16 7E-21 129.1 9.1 104 151-268 20-127 (168)
118 3s9f_A Tryparedoxin; thioredox 99.6 6.2E-17 2.1E-21 132.9 4.4 104 152-266 21-128 (165)
119 4evm_A Thioredoxin family prot 99.6 3.1E-16 1E-20 122.1 7.7 99 158-268 1-106 (138)
120 1o73_A Tryparedoxin; electron 99.6 3.8E-16 1.3E-20 124.0 7.8 102 154-266 3-108 (144)
121 1kng_A Thiol:disulfide interch 99.6 3.1E-16 1.1E-20 125.8 6.1 103 152-268 7-119 (156)
122 2lus_A Thioredoxion; CR-Trp16, 99.4 3.7E-17 1.3E-21 129.5 0.0 104 157-268 2-110 (143)
123 1zof_A Alkyl hydroperoxide-red 99.6 2.2E-15 7.6E-20 126.9 6.3 90 17-113 95-184 (198)
124 2h30_A Thioredoxin, peptide me 99.6 7.8E-16 2.7E-20 124.7 2.2 103 155-267 16-122 (164)
125 1we0_A Alkyl hydroperoxide red 99.5 4.4E-15 1.5E-19 123.8 6.5 89 18-112 91-180 (187)
126 4gqc_A Thiol peroxidase, perox 99.4 3.6E-13 1.2E-17 110.6 7.2 71 17-89 88-159 (164)
127 2bmx_A Alkyl hydroperoxidase C 99.4 1.2E-12 4.2E-17 109.8 8.6 83 18-111 105-187 (195)
128 4g2e_A Peroxiredoxin; redox pr 99.3 2.6E-12 8.8E-17 104.5 9.2 72 17-89 85-157 (157)
129 4h86_A Peroxiredoxin type-2; o 99.3 4.7E-12 1.6E-16 106.6 10.2 112 152-268 25-155 (199)
130 3mng_A Peroxiredoxin-5, mitoch 99.2 1.2E-11 4E-16 102.6 7.3 70 18-88 101-173 (173)
131 1xiy_A Peroxiredoxin, pfaop; a 99.1 1.7E-10 5.9E-15 96.5 7.8 69 18-89 102-181 (182)
132 3keb_A Probable thiol peroxida 99.0 6.2E-10 2.1E-14 96.0 9.4 70 18-90 104-176 (224)
133 2fwh_A Thiol:disulfide interch 99.0 7.8E-11 2.7E-15 92.8 3.3 95 154-255 5-104 (134)
134 4f82_A Thioredoxin reductase; 99.0 5.5E-10 1.9E-14 92.9 5.6 67 18-88 105-174 (176)
135 3ixr_A Bacterioferritin comigr 98.9 1.3E-09 4.5E-14 90.1 7.1 72 17-89 106-177 (179)
136 3drn_A Peroxiredoxin, bacterio 98.9 2.6E-09 9E-14 86.4 8.2 75 17-99 84-158 (161)
137 2l57_A Uncharacterized protein 98.9 9E-10 3.1E-14 85.2 3.5 89 157-254 4-94 (126)
138 2ju5_A Thioredoxin disulfide i 98.9 1.1E-09 3.7E-14 88.5 3.8 99 148-254 19-128 (154)
139 2xhf_A Peroxiredoxin 5; oxidor 98.9 1.6E-09 5.6E-14 89.6 4.8 64 20-85 103-169 (171)
140 3gkn_A Bacterioferritin comigr 98.8 3.8E-09 1.3E-13 85.2 5.9 72 17-89 90-161 (163)
141 3hxs_A Thioredoxin, TRXP; elec 98.8 9.5E-09 3.2E-13 80.8 6.4 82 164-254 36-117 (141)
142 3p7x_A Probable thiol peroxida 98.8 2.5E-08 8.4E-13 81.1 8.9 66 17-88 98-166 (166)
143 3ul3_B Thioredoxin, thioredoxi 98.8 9E-09 3.1E-13 80.0 5.9 73 155-235 20-92 (128)
144 1psq_A Probable thiol peroxida 98.7 6E-08 2.1E-12 78.5 10.0 65 18-88 96-163 (163)
145 1z6n_A Hypothetical protein PA 98.7 7.2E-09 2.5E-13 85.3 4.0 73 174-253 49-121 (167)
146 3uma_A Hypothetical peroxiredo 98.7 1.3E-08 4.5E-13 85.0 5.1 64 18-84 114-183 (184)
147 2pwj_A Mitochondrial peroxired 98.7 2.3E-08 7.8E-13 82.2 6.4 68 19-88 104-171 (171)
148 1xvw_A Hypothetical protein RV 98.7 7.4E-08 2.5E-12 77.2 8.8 67 17-89 91-159 (160)
149 2ywi_A Hypothetical conserved 98.7 5.8E-08 2E-12 80.5 8.1 78 17-106 108-196 (196)
150 3u5r_E Uncharacterized protein 98.6 8.5E-08 2.9E-12 81.7 9.0 79 17-107 121-210 (218)
151 2cvb_A Probable thiol-disulfid 98.6 5.9E-08 2E-12 80.1 7.6 79 17-107 94-182 (188)
152 1nm3_A Protein HI0572; hybrid, 98.6 7.2E-08 2.5E-12 83.2 8.3 70 17-89 90-166 (241)
153 3fk8_A Disulphide isomerase; A 98.6 5.8E-08 2E-12 75.6 6.0 75 178-254 27-103 (133)
154 1tp9_A Peroxiredoxin, PRX D (t 98.6 4.5E-08 1.5E-12 79.4 5.4 64 17-84 92-161 (162)
155 3zrd_A Thiol peroxidase; oxido 98.6 1.5E-07 5.1E-12 79.3 8.7 68 16-86 130-200 (200)
156 1q98_A Thiol peroxidase, TPX; 98.6 1.3E-07 4.6E-12 76.6 8.0 68 16-86 95-165 (165)
157 3p2a_A Thioredoxin 2, putative 98.6 5.6E-08 1.9E-12 77.2 5.2 75 155-235 31-105 (148)
158 2dj3_A Protein disulfide-isome 98.5 1.1E-07 3.9E-12 73.7 6.2 63 160-224 5-69 (133)
159 2djj_A PDI, protein disulfide- 98.5 1.6E-07 5.4E-12 71.5 6.4 61 164-225 9-73 (121)
160 2yzh_A Probable thiol peroxida 98.5 4.1E-07 1.4E-11 74.0 7.8 68 17-88 100-170 (171)
161 3gix_A Thioredoxin-like protei 98.4 1.4E-07 4.7E-12 75.8 4.6 52 179-235 22-73 (149)
162 3f9u_A Putative exported cytoc 98.4 1.1E-07 3.6E-12 77.5 3.8 47 177-225 44-93 (172)
163 2dml_A Protein disulfide-isome 98.4 4.7E-07 1.6E-11 69.8 7.2 66 179-252 34-99 (130)
164 3d6i_A Monothiol glutaredoxin- 98.4 3.4E-07 1.1E-11 68.8 6.0 46 179-225 20-65 (112)
165 1sen_A Thioredoxin-like protei 98.4 5E-09 1.7E-13 85.6 -5.1 89 159-254 27-115 (164)
166 2jsy_A Probable thiol peroxida 98.4 8E-07 2.7E-11 71.7 7.9 67 17-89 97-166 (167)
167 3zzx_A Thioredoxin; oxidoreduc 98.4 9.9E-08 3.4E-12 72.2 2.2 46 177-225 17-62 (105)
168 2voc_A Thioredoxin; electron t 98.4 5.6E-07 1.9E-11 67.9 6.4 45 179-225 16-60 (112)
169 2vlu_A Thioredoxin, thioredoxi 98.4 9.6E-08 3.3E-12 73.0 2.0 68 155-225 8-76 (122)
170 3qfa_C Thioredoxin; protein-pr 98.4 2.9E-07 1E-11 70.2 4.6 53 177-235 28-80 (116)
171 1xvq_A Thiol peroxidase; thior 98.4 1.4E-06 4.7E-11 71.3 9.0 69 17-88 96-166 (175)
172 1x5e_A Thioredoxin domain cont 98.4 4.8E-07 1.6E-11 69.6 5.8 46 178-225 21-66 (126)
173 2l5l_A Thioredoxin; structural 98.4 4.8E-07 1.6E-11 70.9 5.7 68 179-254 37-104 (136)
174 2dj0_A Thioredoxin-related tra 98.4 3.9E-07 1.3E-11 71.4 5.1 47 178-225 24-70 (137)
175 1qgv_A Spliceosomal protein U5 98.4 5.3E-07 1.8E-11 71.7 5.9 45 179-225 22-66 (142)
176 2wfc_A Peroxiredoxin 5, PRDX5; 98.3 6.1E-07 2.1E-11 73.4 6.2 70 17-88 88-159 (167)
177 2pu9_C TRX-F, thioredoxin F-ty 98.3 8.4E-07 2.9E-11 66.5 6.2 44 178-224 22-65 (111)
178 1t00_A Thioredoxin, TRX; redox 98.3 7.6E-07 2.6E-11 66.7 5.9 45 179-225 22-66 (112)
179 3die_A Thioredoxin, TRX; elect 98.3 7.9E-07 2.7E-11 65.6 5.9 46 179-226 18-63 (106)
180 3f3q_A Thioredoxin-1; His TAG, 98.3 6.7E-07 2.3E-11 67.3 5.4 51 179-235 23-73 (109)
181 1xfl_A Thioredoxin H1; AT3G510 98.3 7.2E-07 2.5E-11 68.9 5.7 67 156-225 13-80 (124)
182 3cxg_A Putative thioredoxin; m 98.3 1.1E-07 3.9E-12 74.5 0.9 59 162-225 23-81 (133)
183 1nsw_A Thioredoxin, TRX; therm 98.3 8.9E-07 3.1E-11 65.4 5.6 45 179-225 16-60 (105)
184 1ep7_A Thioredoxin CH1, H-type 98.3 9.9E-07 3.4E-11 66.0 5.9 51 180-235 24-74 (112)
185 1x5d_A Protein disulfide-isome 98.3 8.7E-07 3E-11 68.4 5.7 46 179-225 24-72 (133)
186 1gh2_A Thioredoxin-like protei 98.3 1E-06 3.6E-11 65.6 5.8 44 179-225 20-63 (107)
187 2f51_A Thioredoxin; electron t 98.3 1E-06 3.4E-11 67.4 5.8 77 165-250 6-84 (118)
188 1dby_A Chloroplast thioredoxin 98.3 1.1E-06 3.8E-11 65.2 5.9 45 179-225 18-62 (107)
189 2dj1_A Protein disulfide-isome 98.3 5.8E-07 2E-11 70.2 4.5 46 179-225 33-80 (140)
190 2j23_A Thioredoxin; immune pro 98.3 6E-07 2.1E-11 68.8 4.4 46 179-225 32-77 (121)
191 1fb6_A Thioredoxin M; electron 98.3 8.2E-07 2.8E-11 65.4 5.0 45 179-225 17-61 (105)
192 3qou_A Protein YBBN; thioredox 98.3 6.4E-07 2.2E-11 78.8 5.1 46 178-225 24-69 (287)
193 1faa_A Thioredoxin F; electron 98.3 1.3E-06 4.6E-11 66.7 6.1 44 178-224 35-78 (124)
194 3idv_A Protein disulfide-isome 98.3 4E-06 1.4E-10 71.3 9.7 53 179-235 146-200 (241)
195 1thx_A Thioredoxin, thioredoxi 98.2 1.7E-06 6E-11 64.7 6.5 45 179-225 24-68 (115)
196 2a4v_A Peroxiredoxin DOT5; yea 98.2 1.2E-06 4.1E-11 70.2 5.9 66 17-89 89-157 (159)
197 3idv_A Protein disulfide-isome 98.2 8.8E-07 3E-11 75.4 5.2 54 178-235 30-85 (241)
198 3d22_A TRXH4, thioredoxin H-ty 98.2 1.3E-06 4.3E-11 68.4 5.7 52 178-235 44-95 (139)
199 4euy_A Uncharacterized protein 98.2 6.1E-07 2.1E-11 66.8 3.7 45 179-226 17-61 (105)
200 2oe3_A Thioredoxin-3; electron 98.2 1.2E-06 4E-11 66.7 5.3 44 179-225 29-72 (114)
201 2i4a_A Thioredoxin; acidophIle 98.2 1.7E-06 6E-11 63.9 6.2 45 179-225 19-63 (107)
202 3aps_A DNAJ homolog subfamily 98.2 1.9E-06 6.5E-11 65.6 6.4 46 179-226 20-65 (122)
203 1w4v_A Thioredoxin, mitochondr 98.2 1.7E-06 5.9E-11 66.0 6.1 52 179-235 30-81 (119)
204 1xwb_A Thioredoxin; dimerizati 98.2 2E-06 6.8E-11 63.4 6.2 46 178-225 18-63 (106)
205 2vim_A Thioredoxin, TRX; thior 98.2 1.7E-06 5.7E-11 63.6 5.7 45 178-225 17-61 (104)
206 3m9j_A Thioredoxin; oxidoreduc 98.2 1.6E-06 5.4E-11 63.9 5.6 46 177-225 17-62 (105)
207 3h79_A Thioredoxin-like protei 98.2 2.6E-06 8.9E-11 65.6 6.9 53 179-235 32-88 (127)
208 2xc2_A Thioredoxinn; oxidoredu 98.2 1.2E-06 4.1E-11 66.4 4.8 45 177-225 30-74 (117)
209 2trx_A Thioredoxin; electron t 98.2 1.7E-06 5.7E-11 64.3 5.5 45 179-225 19-63 (108)
210 2ppt_A Thioredoxin-2; thiredox 98.2 5.7E-07 1.9E-11 72.5 3.1 45 179-225 63-107 (155)
211 1zma_A Bacterocin transport ac 98.2 3.8E-06 1.3E-10 63.7 7.3 53 179-235 28-83 (118)
212 1syr_A Thioredoxin; SGPP, stru 98.2 2.4E-06 8.2E-11 64.3 6.0 45 179-226 25-69 (112)
213 2o8v_B Thioredoxin 1; disulfid 98.2 1.7E-06 5.7E-11 67.3 5.1 45 179-225 39-83 (128)
214 2wz9_A Glutaredoxin-3; protein 98.2 1.7E-06 5.8E-11 69.2 5.2 63 179-250 31-93 (153)
215 1r26_A Thioredoxin; redox-acti 98.2 2E-06 6.9E-11 66.6 5.5 44 179-225 36-79 (125)
216 2e0q_A Thioredoxin; electron t 98.2 2.4E-06 8.2E-11 62.4 5.6 44 179-225 15-58 (104)
217 3apq_A DNAJ homolog subfamily 98.2 4.9E-07 1.7E-11 76.2 2.0 65 159-226 94-158 (210)
218 3tco_A Thioredoxin (TRXA-1); d 98.2 2.9E-06 9.8E-11 62.8 6.0 52 179-235 20-71 (109)
219 2av4_A Thioredoxin-like protei 98.2 2.5E-06 8.4E-11 69.3 5.9 45 179-225 40-84 (160)
220 1ti3_A Thioredoxin H, PTTRXH1; 98.1 2.8E-06 9.4E-11 63.5 5.6 44 179-225 25-68 (113)
221 3uem_A Protein disulfide-isome 98.1 1.6E-05 5.3E-10 72.2 11.6 45 179-224 266-311 (361)
222 3hz4_A Thioredoxin; NYSGXRC, P 98.1 3.6E-06 1.2E-10 66.2 6.4 52 179-235 23-74 (140)
223 2vm1_A Thioredoxin, thioredoxi 98.1 2.8E-06 9.5E-11 64.0 5.5 44 179-225 27-70 (118)
224 3gnj_A Thioredoxin domain prot 98.1 3.2E-06 1.1E-10 62.9 5.8 52 179-235 21-72 (111)
225 1wou_A Thioredoxin -related pr 98.1 1.7E-06 5.9E-11 66.6 4.3 44 178-223 22-72 (123)
226 3emx_A Thioredoxin; structural 98.1 1.5E-06 5.2E-11 68.0 3.6 53 178-235 30-88 (135)
227 2yzu_A Thioredoxin; redox prot 98.1 4.6E-06 1.6E-10 61.5 5.9 45 179-225 17-61 (109)
228 2kuc_A Putative disulphide-iso 98.1 3.4E-06 1.1E-10 64.9 5.2 76 172-254 20-98 (130)
229 3dxb_A Thioredoxin N-terminall 98.1 3.1E-06 1.1E-10 72.0 5.3 45 179-225 29-73 (222)
230 3uvt_A Thioredoxin domain-cont 98.1 2.5E-06 8.5E-11 63.4 4.1 53 179-235 20-74 (111)
231 2dbc_A PDCL2, unnamed protein 98.1 2.8E-06 9.7E-11 66.6 4.6 44 179-225 29-72 (135)
232 2i1u_A Thioredoxin, TRX, MPT46 98.1 5.3E-06 1.8E-10 62.8 5.9 45 179-225 29-73 (121)
233 3q6o_A Sulfhydryl oxidase 1; p 98.0 7.5E-06 2.6E-10 70.4 6.6 67 179-250 29-97 (244)
234 2b7k_A SCO1 protein; metalloch 98.0 6.4E-06 2.2E-10 68.9 6.0 85 17-103 103-195 (200)
235 2l6c_A Thioredoxin; oxidoreduc 98.0 4.5E-06 1.5E-10 62.7 4.1 43 179-224 18-60 (110)
236 4evm_A Thioredoxin family prot 98.0 3.3E-05 1.1E-09 58.8 9.0 56 17-88 81-137 (138)
237 2lst_A Thioredoxin; structural 97.2 1E-06 3.4E-11 68.0 0.0 76 169-251 9-87 (130)
238 1fo5_A Thioredoxin; disulfide 98.0 9.5E-06 3.2E-10 57.3 5.1 43 181-225 3-45 (85)
239 2yj7_A LPBCA thioredoxin; oxid 97.2 1.1E-06 3.9E-11 64.4 0.0 45 179-225 18-62 (106)
240 3eyt_A Uncharacterized protein 97.9 3.9E-05 1.3E-09 60.7 9.0 57 17-89 90-151 (158)
241 1v98_A Thioredoxin; oxidoreduc 97.9 1.3E-05 4.5E-10 62.6 6.1 44 180-225 50-93 (140)
242 1mek_A Protein disulfide isome 97.9 3.2E-06 1.1E-10 63.5 1.8 45 179-224 23-69 (120)
243 3lor_A Thiol-disulfide isomera 97.9 4.7E-05 1.6E-09 60.2 8.7 57 17-89 92-154 (160)
244 2f9s_A Thiol-disulfide oxidore 97.9 5E-05 1.7E-09 59.6 8.7 57 17-89 81-137 (151)
245 3kcm_A Thioredoxin family prot 97.9 4.3E-05 1.5E-09 60.1 8.3 62 17-92 84-145 (154)
246 3ed3_A Protein disulfide-isome 97.9 1.3E-05 4.6E-10 71.5 5.8 54 179-235 34-87 (298)
247 1wmj_A Thioredoxin H-type; str 97.9 3E-06 1E-10 65.0 1.0 45 178-225 34-78 (130)
248 3t58_A Sulfhydryl oxidase 1; o 97.8 1.9E-05 6.4E-10 76.0 6.5 67 179-250 29-97 (519)
249 1nho_A Probable thioredoxin; b 97.8 1.1E-05 3.6E-10 57.1 3.4 42 182-225 3-44 (85)
250 1a0r_P Phosducin, MEKA, PP33; 97.8 1.2E-05 4.1E-10 70.0 4.2 43 179-224 132-174 (245)
251 3gl3_A Putative thiol:disulfid 97.8 0.00011 3.9E-09 57.4 9.3 59 17-89 83-141 (152)
252 1lu4_A Soluble secreted antige 97.8 0.0001 3.4E-09 56.4 8.7 58 17-88 77-134 (136)
253 3ira_A Conserved protein; meth 97.8 2.2E-05 7.5E-10 64.7 4.8 76 177-254 36-116 (173)
254 3hdc_A Thioredoxin family prot 97.8 7.3E-05 2.5E-09 59.4 7.7 60 17-90 93-152 (158)
255 1jfu_A Thiol:disulfide interch 97.8 6.9E-05 2.4E-09 61.1 7.7 63 17-89 116-179 (186)
256 3evi_A Phosducin-like protein 97.7 2.5E-05 8.6E-10 60.2 4.5 42 180-224 23-64 (118)
257 2hls_A Protein disulfide oxido 97.7 6.7E-05 2.3E-09 64.8 7.5 47 177-224 135-184 (243)
258 1a8l_A Protein disulfide oxido 97.7 4.8E-05 1.6E-09 64.1 6.4 44 180-224 134-180 (226)
259 1xzo_A BSSCO, hypothetical pro 97.7 7E-05 2.4E-09 60.2 7.1 70 17-89 94-171 (174)
260 3kh7_A Thiol:disulfide interch 97.7 5.1E-05 1.7E-09 61.9 6.2 55 17-87 109-164 (176)
261 3fw2_A Thiol-disulfide oxidore 97.7 7.9E-05 2.7E-09 58.6 7.1 53 17-88 91-146 (150)
262 3erw_A Sporulation thiol-disul 97.7 0.00013 4.4E-09 56.3 8.2 53 17-85 92-144 (145)
263 2b5x_A YKUV protein, TRXY; thi 97.7 0.00016 5.4E-09 56.0 8.6 57 17-89 88-144 (148)
264 1oaz_A Thioredoxin 1; immune s 97.7 2.3E-05 7.9E-10 60.3 3.4 45 179-225 20-78 (123)
265 3f8u_A Protein disulfide-isome 97.7 3.5E-05 1.2E-09 72.7 5.3 46 179-225 369-415 (481)
266 1ilo_A Conserved hypothetical 97.7 9.6E-05 3.3E-09 51.2 6.3 37 183-221 2-38 (77)
267 3lwa_A Secreted thiol-disulfid 97.7 0.00011 3.7E-09 59.9 7.4 60 17-89 121-180 (183)
268 3raz_A Thioredoxin-related pro 97.6 0.00011 3.9E-09 57.7 7.0 62 17-92 78-142 (151)
269 3ewl_A Uncharacterized conserv 97.6 0.00014 4.7E-09 56.4 7.2 54 17-89 85-140 (142)
270 2l5o_A Putative thioredoxin; s 97.6 0.00018 6.2E-09 56.3 7.9 57 17-89 84-140 (153)
271 3kp8_A Vkorc1/thioredoxin doma 97.6 6.3E-07 2.1E-11 67.9 -6.4 37 172-210 5-41 (106)
272 2hyx_A Protein DIPZ; thioredox 97.6 0.00019 6.6E-09 65.6 8.8 71 17-103 142-212 (352)
273 2qgv_A Hydrogenase-1 operon pr 97.6 2.5E-05 8.7E-10 62.1 2.5 53 179-235 33-87 (140)
274 3ph9_A Anterior gradient prote 97.6 1.6E-05 5.5E-10 64.1 1.3 74 179-264 43-120 (151)
275 2qsi_A Putative hydrogenase ex 97.6 6.4E-05 2.2E-09 59.6 4.6 51 180-235 33-85 (137)
276 2h30_A Thioredoxin, peptide me 97.6 0.00031 1.1E-08 55.6 8.8 57 17-89 98-155 (164)
277 3qcp_A QSOX from trypanosoma b 97.6 4.6E-05 1.6E-09 72.2 4.4 53 179-235 41-100 (470)
278 2trc_P Phosducin, MEKA, PP33; 97.5 3.8E-05 1.3E-09 65.5 3.3 42 179-223 119-160 (217)
279 4h86_A Peroxiredoxin type-2; o 97.5 3E-05 1E-09 65.1 2.6 50 18-71 132-181 (199)
280 3ia1_A THIO-disulfide isomeras 97.5 0.0001 3.5E-09 58.0 5.6 57 17-89 84-143 (154)
281 1zzo_A RV1677; thioredoxin fol 97.5 0.0004 1.4E-08 52.7 8.8 55 17-88 78-133 (136)
282 2ggt_A SCO1 protein homolog, m 97.5 0.00014 4.8E-09 57.7 6.3 69 17-89 86-160 (164)
283 1sji_A Calsequestrin 2, calseq 97.5 0.0001 3.4E-09 66.8 6.0 52 179-235 27-85 (350)
284 2b5e_A Protein disulfide-isome 97.5 0.0001 3.6E-09 69.9 6.3 53 179-235 30-82 (504)
285 2r2j_A Thioredoxin domain-cont 97.5 0.00013 4.5E-09 67.0 6.6 53 179-235 21-78 (382)
286 2rli_A SCO2 protein homolog, m 97.5 0.00032 1.1E-08 56.0 8.3 71 17-91 89-165 (171)
287 2lrn_A Thiol:disulfide interch 97.4 0.00026 8.9E-09 55.7 6.6 53 18-89 85-140 (152)
288 3hcz_A Possible thiol-disulfid 97.4 0.00026 8.8E-09 54.8 6.4 55 18-88 87-144 (148)
289 3fkf_A Thiol-disulfide oxidore 97.4 0.00036 1.2E-08 54.0 7.1 54 17-89 89-145 (148)
290 1kng_A Thiol:disulfide interch 97.4 0.00059 2E-08 53.4 8.3 56 17-88 94-150 (156)
291 3iv4_A Putative oxidoreductase 97.4 0.00024 8.1E-09 54.3 5.6 52 180-235 24-76 (112)
292 3f8u_A Protein disulfide-isome 97.3 0.0002 7E-09 67.4 5.6 51 180-235 21-71 (481)
293 2b1k_A Thiol:disulfide interch 97.3 0.00067 2.3E-08 54.1 8.0 56 17-88 102-158 (168)
294 2b5e_A Protein disulfide-isome 97.3 0.00018 6.1E-09 68.3 5.2 44 179-223 375-420 (504)
295 3apo_A DNAJ homolog subfamily 97.3 0.00025 8.4E-09 71.0 6.2 46 178-225 453-498 (780)
296 2k6v_A Putative cytochrome C o 97.3 0.00013 4.4E-09 58.3 3.4 68 17-88 97-171 (172)
297 2ls5_A Uncharacterized protein 96.4 3.5E-05 1.2E-09 61.2 0.0 59 16-89 89-147 (159)
298 2lrt_A Uncharacterized protein 97.3 0.00038 1.3E-08 55.1 6.0 53 18-86 89-144 (152)
299 2ywm_A Glutaredoxin-like prote 97.3 0.00032 1.1E-08 59.2 5.9 42 180-224 136-177 (229)
300 1eej_A Thiol:disulfide interch 97.3 0.00043 1.5E-08 58.5 6.6 45 172-222 79-123 (216)
301 3ga4_A Dolichyl-diphosphooligo 97.3 0.00052 1.8E-08 56.7 6.8 53 179-235 36-99 (178)
302 3ha9_A Uncharacterized thiored 97.3 0.00047 1.6E-08 54.9 6.4 54 18-89 109-163 (165)
303 3me7_A Putative uncharacterize 97.3 0.00036 1.2E-08 56.5 5.7 59 27-91 105-163 (170)
304 3or5_A Thiol:disulfide interch 97.3 0.00093 3.2E-08 52.8 8.1 62 17-89 89-150 (165)
305 3apo_A DNAJ homolog subfamily 97.2 0.00043 1.5E-08 69.2 6.4 45 179-225 674-718 (780)
306 3cmi_A Peroxiredoxin HYR1; thi 97.1 8.1E-05 2.8E-09 60.1 0.3 69 17-89 94-167 (171)
307 3gyk_A 27KDA outer membrane pr 97.1 0.00098 3.4E-08 53.8 6.4 48 170-221 13-60 (175)
308 2es7_A Q8ZP25_salty, putative 97.0 0.00022 7.6E-09 56.5 1.8 41 181-224 35-79 (142)
309 4fo5_A Thioredoxin-like protei 97.0 0.0013 4.4E-08 51.0 6.2 52 17-87 87-142 (143)
310 2e7p_A Glutaredoxin; thioredox 97.0 0.0002 6.9E-09 53.8 1.2 40 178-224 17-56 (116)
311 2dlx_A UBX domain-containing p 96.9 0.0034 1.1E-07 50.4 7.8 68 179-252 41-111 (153)
312 3dwv_A Glutathione peroxidase- 96.8 0.0012 4.1E-08 54.1 4.7 68 17-89 109-182 (187)
313 2lja_A Putative thiol-disulfid 96.7 0.0014 4.9E-08 51.0 4.7 56 19-90 87-143 (152)
314 3us3_A Calsequestrin-1; calciu 96.7 0.0031 1.1E-07 57.4 7.5 53 179-235 29-87 (367)
315 3hd5_A Thiol:disulfide interch 96.7 0.0013 4.4E-08 54.1 4.4 43 179-223 24-66 (195)
316 1wjk_A C330018D20RIK protein; 96.7 0.00056 1.9E-08 50.7 1.9 60 169-235 4-63 (100)
317 2vup_A Glutathione peroxidase- 96.7 0.0005 1.7E-08 56.5 1.7 68 17-89 111-184 (190)
318 1ego_A Glutaredoxin; electron 96.7 0.00082 2.8E-08 47.4 2.5 49 184-235 3-52 (85)
319 2i3y_A Epididymal secretory gl 96.6 0.00094 3.2E-08 56.7 2.7 33 53-89 178-210 (215)
320 3eur_A Uncharacterized protein 96.6 0.0042 1.4E-07 47.9 6.2 51 17-86 89-141 (142)
321 2r37_A Glutathione peroxidase 96.5 0.00088 3E-08 56.4 2.3 33 53-89 160-192 (207)
322 2obi_A PHGPX, GPX-4, phospholi 96.4 0.0022 7.7E-08 52.1 3.9 68 17-88 109-182 (183)
323 2gs3_A PHGPX, GPX-4, phospholi 96.4 0.00085 2.9E-08 54.9 1.3 68 17-88 111-184 (185)
324 1a8l_A Protein disulfide oxido 96.3 0.0069 2.4E-07 50.6 6.5 54 178-235 20-74 (226)
325 2k8s_A Thioredoxin; dimer, str 96.3 0.0035 1.2E-07 43.9 3.8 36 184-223 4-39 (80)
326 2p5q_A Glutathione peroxidase 96.3 0.0019 6.5E-08 51.3 2.6 61 17-88 95-166 (170)
327 2v1m_A Glutathione peroxidase; 96.2 0.005 1.7E-07 48.7 4.8 68 17-88 94-165 (169)
328 3dml_A Putative uncharacterize 96.1 0.0011 3.8E-08 50.8 0.4 47 177-224 15-62 (116)
329 2djk_A PDI, protein disulfide- 95.9 0.0064 2.2E-07 46.9 4.1 43 179-224 22-64 (133)
330 2fgx_A Putative thioredoxin; N 95.9 0.0052 1.8E-07 46.3 3.4 39 182-224 30-68 (107)
331 2f8a_A Glutathione peroxidase 95.9 0.0026 8.7E-08 53.4 1.8 33 52-88 173-205 (208)
332 2p31_A CL683, glutathione pero 95.9 0.0033 1.1E-07 51.1 2.3 31 54-88 149-179 (181)
333 3h93_A Thiol:disulfide interch 95.8 0.0076 2.6E-07 49.3 4.5 42 179-222 24-65 (192)
334 1z6m_A Conserved hypothetical 95.8 0.027 9.2E-07 45.1 7.5 49 172-222 20-69 (175)
335 2znm_A Thiol:disulfide interch 95.7 0.0078 2.7E-07 49.2 4.0 42 179-222 21-62 (195)
336 1h75_A Glutaredoxin-like prote 95.7 0.014 4.7E-07 40.5 4.7 33 184-224 3-35 (81)
337 1hyu_A AHPF, alkyl hydroperoxi 95.6 0.018 6E-07 54.9 6.6 51 179-235 116-166 (521)
338 2lus_A Thioredoxion; CR-Trp16, 94.6 0.0021 7.2E-08 49.4 0.0 48 21-80 90-137 (143)
339 1t3b_A Thiol:disulfide interch 95.5 0.012 4.1E-07 49.4 4.5 38 179-221 85-122 (211)
340 4hde_A SCO1/SENC family lipopr 95.4 0.1 3.5E-06 41.8 9.8 36 52-89 134-169 (170)
341 3hz8_A Thiol:disulfide interch 95.3 0.012 4E-07 48.6 3.8 43 179-223 23-65 (193)
342 2ju5_A Thioredoxin disulfide i 95.3 0.017 5.8E-07 45.6 4.5 49 26-89 103-151 (154)
343 2l57_A Uncharacterized protein 95.1 0.09 3.1E-06 39.3 8.1 57 17-89 57-116 (126)
344 1r7h_A NRDH-redoxin; thioredox 95.1 0.026 8.9E-07 38.2 4.4 44 184-235 3-46 (75)
345 1o8x_A Tryparedoxin, TRYX, TXN 95.0 0.0043 1.5E-07 48.1 0.3 55 20-104 88-144 (146)
346 1un2_A DSBA, thiol-disulfide i 94.9 0.0055 1.9E-07 51.1 0.4 42 180-223 113-157 (197)
347 2qc7_A ERP31, ERP28, endoplasm 94.8 0.028 9.6E-07 48.4 4.7 52 179-235 21-77 (240)
348 1ttz_A Conserved hypothetical 94.8 0.013 4.3E-07 42.3 2.1 42 184-235 3-44 (87)
349 3kij_A Probable glutathione pe 94.5 0.022 7.7E-07 45.9 3.3 36 54-89 138-173 (180)
350 2ywm_A Glutaredoxin-like prote 94.5 0.05 1.7E-06 45.4 5.6 52 181-235 21-77 (229)
351 2rem_A Disulfide oxidoreductas 94.4 0.036 1.2E-06 45.0 4.5 42 179-222 24-65 (193)
352 1v58_A Thiol:disulfide interch 94.1 0.089 3E-06 44.9 6.4 41 178-222 95-135 (241)
353 2c0g_A ERP29 homolog, windbeut 93.8 0.11 3.6E-06 45.0 6.2 53 179-235 32-89 (248)
354 3l9v_A Putative thiol-disulfid 93.6 0.026 9E-07 46.3 2.0 48 174-223 8-58 (189)
355 1o73_A Tryparedoxin; electron 93.6 0.013 4.4E-07 45.0 0.1 37 20-68 88-126 (144)
356 2kuc_A Putative disulphide-iso 93.6 0.16 5.4E-06 38.0 6.3 47 27-89 74-120 (130)
357 3uem_A Protein disulfide-isome 93.5 0.076 2.6E-06 47.6 5.1 52 181-235 136-187 (361)
358 3feu_A Putative lipoprotein; a 93.3 0.058 2E-06 44.1 3.6 39 180-222 22-60 (185)
359 2klx_A Glutaredoxin; thioredox 93.3 0.18 6.1E-06 35.5 5.8 43 184-235 8-50 (89)
360 1kte_A Thioltransferase; redox 93.0 0.038 1.3E-06 40.3 1.8 22 184-206 14-35 (105)
361 3nzn_A Glutaredoxin; structura 92.6 0.16 5.3E-06 37.2 4.8 47 183-235 23-69 (103)
362 2hls_A Protein disulfide oxido 92.5 0.13 4.5E-06 43.8 4.9 52 180-235 25-82 (243)
363 1i5g_A Tryparedoxin II; electr 92.1 0.035 1.2E-06 42.6 0.6 38 20-69 88-127 (144)
364 2fwh_A Thiol:disulfide interch 92.0 0.07 2.4E-06 40.7 2.3 48 26-89 78-127 (134)
365 3fk8_A Disulphide isomerase; A 91.8 0.22 7.5E-06 37.5 5.0 62 19-89 64-132 (133)
366 3kp9_A Vkorc1/thioredoxin doma 91.5 0.03 1E-06 49.6 -0.4 29 181-210 198-226 (291)
367 2cq9_A GLRX2 protein, glutared 91.4 0.24 8.3E-06 37.9 4.8 35 181-224 27-61 (130)
368 3qmx_A Glutaredoxin A, glutare 91.0 0.34 1.2E-05 35.3 5.1 35 183-225 17-51 (99)
369 1fov_A Glutaredoxin 3, GRX3; a 90.9 0.39 1.3E-05 32.8 5.1 44 184-235 3-47 (82)
370 2l5l_A Thioredoxin; structural 90.6 1.1 3.6E-05 33.9 7.9 55 18-89 70-125 (136)
371 2hze_A Glutaredoxin-1; thiored 90.2 0.26 8.9E-06 36.6 3.8 34 182-223 19-55 (114)
372 3hxs_A Thioredoxin, TRXP; elec 89.6 1.1 3.7E-05 33.8 7.2 54 18-88 83-137 (141)
373 3s9f_A Tryparedoxin; thioredox 89.6 0.078 2.7E-06 42.1 0.5 28 29-68 118-146 (165)
374 3rhb_A ATGRXC5, glutaredoxin-C 89.2 0.35 1.2E-05 35.7 3.9 21 184-205 21-41 (113)
375 2khp_A Glutaredoxin; thioredox 89.2 0.49 1.7E-05 33.3 4.5 44 184-235 8-52 (92)
376 2yan_A Glutaredoxin-3; oxidore 89.1 0.4 1.4E-05 35.0 4.1 48 179-235 15-68 (105)
377 2i4a_A Thioredoxin; acidophIle 89.0 1.6 5.6E-05 30.7 7.4 54 18-88 52-106 (107)
378 2ht9_A Glutaredoxin-2; thiored 88.8 0.32 1.1E-05 38.2 3.6 24 181-206 49-72 (146)
379 3l9s_A Thiol:disulfide interch 88.8 0.28 9.5E-06 40.2 3.3 53 168-222 8-64 (191)
380 1nsw_A Thioredoxin, TRX; therm 88.4 1.8 6.2E-05 30.4 7.3 54 18-88 49-103 (105)
381 3ic4_A Glutaredoxin (GRX-1); s 88.3 0.54 1.8E-05 33.0 4.2 36 184-225 14-49 (92)
382 1wik_A Thioredoxin-like protei 88.1 0.83 2.8E-05 33.5 5.3 49 179-235 13-66 (109)
383 2voc_A Thioredoxin; electron t 88.0 1.9 6.5E-05 31.1 7.3 55 18-89 49-104 (112)
384 3c1r_A Glutaredoxin-1; oxidize 88.0 0.42 1.4E-05 35.9 3.7 32 184-223 27-62 (118)
385 2trx_A Thioredoxin; electron t 87.8 2 6.8E-05 30.4 7.2 54 18-88 52-106 (108)
386 2lqo_A Putative glutaredoxin R 87.4 1.1 3.7E-05 32.3 5.4 33 184-224 6-38 (92)
387 1thx_A Thioredoxin, thioredoxi 87.2 2.8 9.7E-05 29.8 7.8 55 18-89 57-112 (115)
388 2yzu_A Thioredoxin; redox prot 87.1 2.5 8.4E-05 29.7 7.3 55 18-89 50-105 (109)
389 3tdg_A DSBG, putative uncharac 86.5 0.88 3E-05 39.7 5.2 40 179-222 146-185 (273)
390 1dby_A Chloroplast thioredoxin 86.4 4.3 0.00015 28.5 8.4 54 18-88 51-105 (107)
391 2pu9_C TRX-F, thioredoxin F-ty 86.2 1.5 5.2E-05 31.4 5.8 44 27-88 66-109 (111)
392 3hz4_A Thioredoxin; NYSGXRC, P 85.7 1.8 6.1E-05 32.8 6.2 74 18-108 56-132 (140)
393 3c7m_A Thiol:disulfide interch 85.6 1.2 4.3E-05 35.5 5.5 43 179-223 16-59 (195)
394 3zzx_A Thioredoxin; oxidoreduc 85.2 1.4 4.8E-05 32.1 5.2 46 25-88 59-104 (105)
395 1w4v_A Thioredoxin, mitochondr 85.0 3 0.0001 30.5 7.0 54 18-88 63-117 (119)
396 3tco_A Thioredoxin (TRXA-1); d 84.6 3.4 0.00012 29.0 7.0 54 18-88 53-107 (109)
397 3ira_A Conserved protein; meth 84.6 2.5 8.6E-05 34.1 6.9 51 26-88 83-145 (173)
398 3die_A Thioredoxin, TRX; elect 84.5 4.9 0.00017 28.0 7.8 54 18-88 51-105 (106)
399 3h8q_A Thioredoxin reductase 3 84.1 1.8 6E-05 32.0 5.3 32 184-223 19-50 (114)
400 4dvc_A Thiol:disulfide interch 83.6 1.1 3.8E-05 35.3 4.3 45 174-220 15-59 (184)
401 2e0q_A Thioredoxin; electron t 82.6 6 0.00021 27.2 7.6 53 19-88 48-101 (104)
402 1t00_A Thioredoxin, TRX; redox 82.6 5.4 0.00019 28.2 7.5 54 18-88 55-109 (112)
403 1ep7_A Thioredoxin CH1, H-type 82.3 4.7 0.00016 28.6 7.0 53 18-88 56-109 (112)
404 1aba_A Glutaredoxin; electron 81.0 3.8 0.00013 28.3 5.9 43 185-235 3-55 (87)
405 3gv1_A Disulfide interchange p 81.0 1.1 3.6E-05 35.2 3.1 35 179-220 13-47 (147)
406 1faa_A Thioredoxin F; electron 80.9 2.8 9.7E-05 30.6 5.4 53 19-89 69-123 (124)
407 1fb6_A Thioredoxin M; electron 80.6 8.3 0.00029 26.7 7.8 54 18-88 50-104 (105)
408 2o8v_B Thioredoxin 1; disulfid 80.5 2.2 7.5E-05 31.9 4.8 54 18-88 72-126 (128)
409 3f3q_A Thioredoxin-1; His TAG, 80.1 3.9 0.00013 29.3 5.9 52 19-88 56-108 (109)
410 2wz9_A Glutaredoxin-3; protein 79.9 3.5 0.00012 31.7 5.9 54 18-89 63-117 (153)
411 3msz_A Glutaredoxin 1; alpha-b 79.1 3.3 0.00011 28.2 5.0 20 184-204 6-25 (89)
412 3ctg_A Glutaredoxin-2; reduced 78.9 1.5 5E-05 33.5 3.3 20 184-204 39-59 (129)
413 3cxg_A Putative thioredoxin; m 78.6 3.7 0.00013 30.8 5.6 47 26-89 79-128 (133)
414 3f9u_A Putative exported cytoc 78.5 0.76 2.6E-05 36.2 1.6 42 32-88 123-164 (172)
415 1xfl_A Thioredoxin H1; AT3G510 77.5 4.8 0.00016 29.7 5.8 46 25-88 77-122 (124)
416 2dlx_A UBX domain-containing p 77.2 5.4 0.00019 31.3 6.3 44 29-89 91-135 (153)
417 2es7_A Q8ZP25_salty, putative 77.1 2.1 7.2E-05 33.1 3.7 50 23-89 75-124 (142)
418 1xwb_A Thioredoxin; dimerizati 77.0 4.7 0.00016 28.1 5.4 53 18-88 52-105 (106)
419 1oaz_A Thioredoxin 1; immune s 76.9 2.5 8.7E-05 31.3 4.1 47 25-88 75-121 (123)
420 3qfa_C Thioredoxin; protein-pr 76.5 6.9 0.00024 28.3 6.4 52 19-88 63-115 (116)
421 1v98_A Thioredoxin; oxidoreduc 75.8 9.8 0.00034 28.3 7.3 54 18-88 82-136 (140)
422 3p2a_A Thioredoxin 2, putative 74.8 11 0.00039 28.3 7.5 56 17-89 86-142 (148)
423 2i1u_A Thioredoxin, TRX, MPT46 74.1 11 0.00039 26.8 7.0 54 18-88 62-116 (121)
424 4euy_A Uncharacterized protein 74.0 6.4 0.00022 27.7 5.5 53 19-88 50-103 (105)
425 2ppt_A Thioredoxin-2; thiredox 73.4 14 0.00049 28.4 7.8 55 18-89 96-151 (155)
426 3gnj_A Thioredoxin domain prot 73.3 17 0.00058 25.3 7.8 54 18-88 54-108 (111)
427 2xc2_A Thioredoxinn; oxidoredu 73.3 7.3 0.00025 28.0 5.8 45 26-88 72-116 (117)
428 2l6c_A Thioredoxin; oxidoreduc 73.0 7.4 0.00025 27.8 5.7 55 18-89 50-105 (110)
429 2ct6_A SH3 domain-binding glut 72.9 8.7 0.0003 28.1 6.1 38 184-224 10-48 (111)
430 3d22_A TRXH4, thioredoxin H-ty 71.8 6.7 0.00023 29.2 5.4 53 19-89 78-131 (139)
431 3ul3_B Thioredoxin, thioredoxi 71.3 6.2 0.00021 29.0 5.0 46 25-87 82-127 (128)
432 2vim_A Thioredoxin, TRX; thior 71.1 9.7 0.00033 26.3 5.9 52 19-88 51-103 (104)
433 3bci_A Disulfide bond protein 71.0 5.7 0.00019 31.5 5.0 41 180-221 11-53 (186)
434 3gn3_A Putative protein-disulf 70.9 3.7 0.00013 33.1 3.9 41 180-221 14-54 (182)
435 1x5d_A Protein disulfide-isome 70.4 9.3 0.00032 27.9 5.9 54 19-89 62-116 (133)
436 2vlu_A Thioredoxin, thioredoxi 70.2 7.7 0.00026 27.9 5.3 53 19-89 66-119 (122)
437 2vm1_A Thioredoxin, thioredoxi 69.5 9.8 0.00034 27.0 5.7 53 19-89 60-113 (118)
438 1r26_A Thioredoxin; redox-acti 69.3 9.7 0.00033 28.1 5.8 53 19-89 69-122 (125)
439 2dml_A Protein disulfide-isome 69.1 6.2 0.00021 28.8 4.6 54 19-88 68-122 (130)
440 1gh2_A Thioredoxin-like protei 68.7 11 0.00038 26.4 5.8 52 19-88 53-105 (107)
441 1t1v_A SH3BGRL3, SH3 domain-bi 68.2 11 0.00038 26.3 5.6 34 184-224 4-42 (93)
442 3ghf_A Septum site-determining 67.3 9.7 0.00033 28.7 5.3 52 177-235 44-95 (120)
443 3gmf_A Protein-disulfide isome 67.2 11 0.00038 30.9 6.2 49 172-222 8-58 (205)
444 2j23_A Thioredoxin; immune pro 67.1 12 0.0004 27.2 5.7 52 19-88 67-119 (121)
445 1syr_A Thioredoxin; SGPP, stru 66.4 11 0.00036 26.9 5.3 52 19-88 58-110 (112)
446 3m9j_A Thioredoxin; oxidoreduc 65.8 13 0.00043 25.7 5.6 52 19-88 52-104 (105)
447 3zyw_A Glutaredoxin-3; metal b 65.6 5.8 0.0002 29.2 3.7 37 178-223 13-54 (111)
448 2wci_A Glutaredoxin-4; redox-a 65.5 3.8 0.00013 31.6 2.8 47 181-235 35-86 (135)
449 2oe3_A Thioredoxin-3; electron 65.4 13 0.00043 26.8 5.6 51 19-87 62-113 (114)
450 1ti3_A Thioredoxin H, PTTRXH1; 65.2 7 0.00024 27.6 4.1 52 19-88 58-110 (113)
451 2f51_A Thioredoxin; electron t 64.9 8.6 0.00029 27.9 4.6 57 18-91 54-114 (118)
452 3d6i_A Monothiol glutaredoxin- 64.6 13 0.00046 26.1 5.6 54 18-89 54-108 (112)
453 1x5e_A Thioredoxin domain cont 64.2 13 0.00045 26.9 5.5 54 18-89 55-109 (126)
454 4f9z_D Endoplasmic reticulum r 63.3 17 0.00059 29.7 6.7 54 180-235 130-183 (227)
455 2lst_A Thioredoxin; structural 67.1 1.5 5.2E-05 32.4 0.0 47 27-89 66-115 (130)
456 3aps_A DNAJ homolog subfamily 62.5 6.9 0.00024 28.2 3.7 59 18-89 53-112 (122)
457 3gix_A Thioredoxin-like protei 62.1 12 0.00042 28.6 5.2 52 25-89 63-120 (149)
458 3gx8_A Monothiol glutaredoxin- 61.7 17 0.00057 27.1 5.7 38 179-224 14-58 (121)
459 3emx_A Thioredoxin; structural 61.4 12 0.0004 27.9 4.9 47 26-89 79-125 (135)
460 3apq_A DNAJ homolog subfamily 61.0 17 0.00058 29.3 6.2 55 18-89 146-201 (210)
461 3ipz_A Monothiol glutaredoxin- 60.4 8.2 0.00028 28.1 3.7 38 178-223 15-56 (109)
462 3q6o_A Sulfhydryl oxidase 1; p 59.5 19 0.00066 29.7 6.4 59 18-89 65-126 (244)
463 2wem_A Glutaredoxin-related pr 59.5 12 0.00041 27.9 4.6 38 179-224 18-60 (118)
464 3uvt_A Thioredoxin domain-cont 59.1 19 0.00066 24.9 5.5 53 18-87 56-109 (111)
465 3ga8_A HTH-type transcriptiona 58.1 5.6 0.00019 27.5 2.3 36 177-212 23-64 (78)
466 3h79_A Thioredoxin-like protei 58.1 14 0.00047 27.0 4.7 55 19-88 71-126 (127)
467 3f4s_A Alpha-DSBA1, putative u 56.8 12 0.00041 31.1 4.6 43 179-222 38-82 (226)
468 3gha_A Disulfide bond formatio 56.8 14 0.00047 30.0 4.9 44 178-222 27-72 (202)
469 3ga4_A Dolichyl-diphosphooligo 56.0 16 0.00055 29.4 5.0 73 19-104 82-166 (178)
470 3l4n_A Monothiol glutaredoxin- 55.0 6.9 0.00024 29.7 2.5 51 181-235 14-65 (127)
471 2jvx_A NF-kappa-B essential mo 52.7 1.9 6.4E-05 24.1 -0.8 20 192-211 5-24 (28)
472 1pn0_A Phenol 2-monooxygenase; 52.0 35 0.0012 33.1 7.6 36 153-188 479-517 (665)
473 3ph9_A Anterior gradient prote 51.2 4.5 0.00016 31.7 0.9 37 52-88 101-143 (151)
474 1rw1_A Conserved hypothetical 50.9 12 0.0004 27.6 3.2 42 187-235 4-49 (114)
475 3qou_A Protein YBBN; thioredox 50.0 44 0.0015 27.9 7.2 54 18-88 58-112 (287)
476 1sen_A Thioredoxin-like protei 49.8 7.5 0.00026 30.3 2.0 38 52-89 104-147 (164)
477 1qgv_A Spliceosomal protein U5 49.8 15 0.00052 27.8 3.8 52 25-89 63-120 (142)
478 1u6t_A SH3 domain-binding glut 49.6 39 0.0013 25.4 6.0 48 186-235 3-52 (121)
479 2k9k_A TONB2; metal transport; 49.3 26 0.00089 25.2 4.9 39 51-89 41-80 (106)
480 1xhj_A Nitrogen fixation prote 49.1 28 0.00096 24.7 4.8 35 168-205 26-60 (88)
481 2dj1_A Protein disulfide-isome 48.9 24 0.00083 25.8 4.8 53 19-89 70-123 (140)
482 3t58_A Sulfhydryl oxidase 1; o 47.0 43 0.0015 31.6 7.1 56 18-89 65-126 (519)
483 3l78_A Regulatory protein SPX; 46.8 23 0.0008 26.2 4.3 43 186-235 3-49 (120)
484 2ec4_A FAS-associated factor 1 46.1 53 0.0018 26.2 6.7 47 179-227 54-103 (178)
485 4ev1_A Anabena TIC22; TIC22 fo 45.2 52 0.0018 28.1 6.7 83 157-251 12-110 (252)
486 2qsi_A Putative hydrogenase ex 44.4 33 0.0011 26.4 4.9 56 17-89 66-122 (137)
487 2qgv_A Hydrogenase-1 operon pr 43.7 27 0.00092 27.0 4.3 54 19-89 70-124 (140)
488 1mek_A Protein disulfide isome 42.9 16 0.00054 25.7 2.8 55 18-89 59-116 (120)
489 3gkx_A Putative ARSC family re 42.7 32 0.0011 25.6 4.5 44 185-235 6-53 (120)
490 2kok_A Arsenate reductase; bru 42.2 37 0.0013 25.0 4.8 43 186-235 8-54 (120)
491 3fz4_A Putative arsenate reduc 41.9 39 0.0013 25.1 4.9 44 185-235 5-52 (120)
492 1u07_A TONB protein; beta-hair 41.9 30 0.001 24.0 4.1 38 51-88 26-64 (90)
493 1zma_A Bacterocin transport ac 40.3 26 0.00089 24.9 3.6 41 29-86 77-117 (118)
494 3dxb_A Thioredoxin N-terminall 39.9 47 0.0016 26.9 5.6 55 18-89 62-117 (222)
495 1z3e_A Regulatory protein SPX; 38.1 49 0.0017 24.7 5.0 40 187-233 5-48 (132)
496 2dkh_A 3-hydroxybenzoate hydro 35.8 62 0.0021 31.0 6.5 52 153-205 467-522 (639)
497 2axo_A Hypothetical protein AT 35.7 68 0.0023 27.6 6.0 38 183-223 44-81 (270)
498 2grx_C Protein TONB; beta barr 34.6 31 0.0011 29.0 3.6 38 51-88 165-203 (229)
499 4fu0_A D-alanine--D-alanine li 32.7 78 0.0027 27.7 6.2 43 52-94 296-352 (357)
500 3kol_A Oxidoreductase, glyoxal 32.2 36 0.0012 25.0 3.4 22 52-73 133-154 (156)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-31 Score=230.09 Aligned_cols=110 Identities=29% Similarity=0.469 Sum_probs=97.4
Q ss_pred CchhhHHHhcCCCCCCCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHH
Q psy1172 1 MFLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDE 80 (276)
Q Consensus 1 ~w~~~i~~~~~~~~~~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~e 80 (276)
+|.++++...| +.+++||||+|++++++++|||+.+.. |+ +.|+||||||+|+||++++|++++|||++|
T Consensus 102 aw~~~~~~~~~----~~~l~fpllsD~~~~vak~YGv~~~~~----g~--~~R~tFiID~~G~Ir~~~v~~~~~grn~dE 171 (216)
T 3sbc_A 102 AWTNIPRKEGG----LGPINIPLLADTNHSLSRDYGVLIEEE----GV--ALRGLFIIDPKGVIRHITINDLPVGRNVDE 171 (216)
T ss_dssp HHHTSCGGGTC----CCSCSSCEEECTTSHHHHHHTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHH
T ss_pred HHHHHHHHhCC----ccCcccceEeCCCCHHHHHcCCeeccC----Cc--eeeEEEEECCCCeEEEEEEcCCCCCCCHHH
Confidence 47777777666 367999999999999999999998764 55 679999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCCcCCCCCCCCceeeCCCCCchhhhccC
Q psy1172 81 ILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123 (276)
Q Consensus 81 ilr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~~~~~~~~~~~ 123 (276)
+||+|+|||++++++++|||||+||+++|+| + .+++++.|
T Consensus 172 iLr~l~AlQ~~~~~~~~~Pa~W~~G~~~i~p-~--~~~~~~~~ 211 (216)
T 3sbc_A 172 ALRLVEAFQWTDKNGTVLPCNWTPGAATIKP-T--VEDSKEYF 211 (216)
T ss_dssp HHHHHHHHHHHHHHCCBBCTTCCTTSCCBCC-S--TTTHHHHH
T ss_pred HHHHHHHhhhHhhcCCCcCCCCCCCCceecC-C--HHHHHHHH
Confidence 9999999999999999999999999999864 3 46666654
No 2
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.96 E-value=4.3e-30 Score=222.46 Aligned_cols=130 Identities=45% Similarity=0.725 Sum_probs=112.8
Q ss_pred CchhhHHHhcCCCCCCCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHH
Q psy1172 1 MFLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDE 80 (276)
Q Consensus 1 ~w~~~i~~~~~~~~~~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~e 80 (276)
+|+++|++..+ ..+++||+|+|++++++++|||+.+...+..|...+.|++|||||+|+|++++.|+++.|||++|
T Consensus 81 ~~~~~i~~~~~----~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~e 156 (220)
T 1xcc_A 81 KWIEDIKYYGK----LNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHE 156 (220)
T ss_dssp HHHHHHHHHHT----CSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHH
T ss_pred HHHHHHHHHhc----CCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHH
Confidence 48888888732 17799999999999999999998653322224334689999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCCcCCCCCCCCceeeCCCCCchhhhccC-C---CC-----Cceeeeee
Q psy1172 81 ILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKL-T---CK-----PIFSRIVS 134 (276)
Q Consensus 81 ilr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~~~~~~~~~~~-~---~~-----~w~~~~~~ 134 (276)
++|.|++||.+++++++|||||+||++||++|++++++|+++| + +. .||+|..+
T Consensus 157 ll~~i~~lq~~~~~~~~~p~~w~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (220)
T 1xcc_A 157 ILRVLKSLQLTYTTPVATPVNWNEGDKCCVIPTLQDDEISKHFKNEITKVEMPSKKKYLRFVN 219 (220)
T ss_dssp HHHHHHHHHHHHHSSEEBCTTCCTTSCEEECTTCCGGGHHHHCSSCEEECCCTTCCCCCEEEC
T ss_pred HHHHHHHHHhhhcCCcccCCCcCcCCceEeCCCCCHHHHHHHhcCCceEeecCCCCceeEecc
Confidence 9999999999999999999999999999999999999999998 4 35 78988764
No 3
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.96 E-value=2.1e-30 Score=223.55 Aligned_cols=103 Identities=27% Similarity=0.496 Sum_probs=74.4
Q ss_pred CchhhHHHhcCCCCCCCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHH
Q psy1172 1 MFLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDE 80 (276)
Q Consensus 1 ~w~~~i~~~~~~~~~~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~e 80 (276)
+|.+..+...+ +.+++||||||++++|+++|||+.+.. |+ +.|+||||||+|+||+++.|++.+|||++|
T Consensus 106 ~w~~~~~~~~~----~~~l~fpllsD~~~~va~~yGv~~~~~----g~--~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~E 175 (219)
T 3tue_A 106 QWTLQDRKKGG----LGTMAIPILADKTKNIARSYGVLEESQ----GV--AYRGLFIIDPHGMLRQITVNDMPVGRSVEE 175 (219)
T ss_dssp HHHHSCGGGTC----CCSCSSCEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred HHhhhhHHhcC----ccccccccccCcccHHHHHcCCcccCC----Ce--eEEEEEEECCCCeEEEEEEecCCCCCCHHH
Confidence 36655555444 368999999999999999999998754 55 679999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCCcCCCCCCCCceeeCCC
Q psy1172 81 ILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPG 113 (276)
Q Consensus 81 ilr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~ 113 (276)
+||+|++||++++++++|||||+||+++|+|++
T Consensus 176 vLr~l~aLQ~~~~~~~~~Pa~W~~G~~~i~p~~ 208 (219)
T 3tue_A 176 VLRLLEAFQFVEKHGEVCPANWKKGDPGMKPEP 208 (219)
T ss_dssp HHHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHhhhHHhcCCCcCCCCCCCCccccCCC
Confidence 999999999999999999999999999998754
No 4
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.96 E-value=1.5e-29 Score=219.71 Aligned_cols=131 Identities=55% Similarity=0.900 Sum_probs=114.6
Q ss_pred CchhhHHHhcCCCCCC---CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCC
Q psy1172 1 MFLQDIQSYSSCGEGD---GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRN 77 (276)
Q Consensus 1 ~w~~~i~~~~~~~~~~---~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~ 77 (276)
+|+++|++..| + .+++||+|+|++++++++|||+.+...+..|+..+.|++|||||+|+|++++.|+++.|||
T Consensus 81 ~~~~~i~~~~~----~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~ 156 (224)
T 1prx_A 81 AWSKDINAYNS----EEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRN 156 (224)
T ss_dssp HHHHHHHHHTT----SCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCC
T ss_pred HHHHHHHHhhC----cccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCC
Confidence 48888888754 2 4699999999999999999998764322234445789999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCcCCCCCCCCceeeCCCCCchhhhccCC----CCC-----ceeeeeec
Q psy1172 78 FDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKLT----CKP-----IFSRIVSL 135 (276)
Q Consensus 78 ~~eilr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~~~~~~~~~~~~----~~~-----w~~~~~~~ 135 (276)
++||+|.|++||.+++++++|||||+||++||++|++++++|+++|+ +.. ||+|..++
T Consensus 157 ~~eil~~i~~l~~~~~~~~~~p~~W~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (224)
T 1prx_A 157 FDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQ 223 (224)
T ss_dssp HHHHHHHHHHHHHHHHHCEEBCTTCCTTSCEEECTTSCHHHHHHHCTTCCEECCCTTCCCCCEEECC
T ss_pred HHHHHHHHHHHHhhccCCcCCCCCCCCCCceEeCCCCCHHHHHHhhccCceeeccCCCCceEEeccC
Confidence 99999999999999999999999999999999999999999999884 567 99988653
No 5
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.96 E-value=7.8e-30 Score=222.80 Aligned_cols=130 Identities=56% Similarity=0.909 Sum_probs=114.2
Q ss_pred CchhhHHHhcCCCCCCC--CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCH
Q psy1172 1 MFLQDIQSYSSCGEGDG--KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNF 78 (276)
Q Consensus 1 ~w~~~i~~~~~~~~~~~--~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~ 78 (276)
+|+++|++..+ . +++||+|+|++++++++|||+.+...+..|...+.|++|||||+|+|++++.|+++.|||+
T Consensus 79 ~~~~~i~~~~~-----~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~ 153 (233)
T 2v2g_A 79 EWSEDVKCLSG-----VKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNF 153 (233)
T ss_dssp HHHHHHHHHHT-----CCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred HHHHHHHHhhC-----cccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 48888888655 5 7999999999999999999986532222243447899999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCcCCCCCCCCceeeCCCCCchhhhccCC---CCC-----ceeeeeec
Q psy1172 79 DEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGKLT---CKP-----IFSRIVSL 135 (276)
Q Consensus 79 ~eilr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~~~~~~~~~~~~---~~~-----w~~~~~~~ 135 (276)
+||+|.|++||.+++++++|||||+||++||++|++++++|+++|+ +.. ||+|..++
T Consensus 154 ~eilr~l~~Lq~~~~~~~~~p~~W~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (233)
T 2v2g_A 154 SEILRVIDSLQLTAQKKVATPADWQPGDRCMVVPGVSAEEAKTLFPNMEVKAVPSGKGYLRYTPQ 218 (233)
T ss_dssp HHHHHHHHHHHHHHHSSEEBCTTCCTTSCEEECTTSCHHHHHHHCTTCEECCCTTCCSCCEEECC
T ss_pred HHHHHHHHHHHhhccCCccCCCCcCcCCceEeCCCCCHHHHHHhcCCceEeccCCCCceEEEecC
Confidence 9999999999999999999999999999999999999999999874 567 99999765
No 6
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.95 E-value=7.4e-28 Score=212.08 Aligned_cols=125 Identities=30% Similarity=0.496 Sum_probs=114.0
Q ss_pred CchhhHHHhcCCCCCCCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHH
Q psy1172 1 MFLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDE 80 (276)
Q Consensus 1 ~w~~~i~~~~~~~~~~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~e 80 (276)
+|++++++..| .+++||+++|++++++++|||+.+.. |. .+.|++|||||+|+|++++.|+.++|||++|
T Consensus 83 ~w~~~~~~~~~-----~~i~fPil~D~~~~ia~~ygv~~~~~----g~-~~~p~~fIID~dG~I~~~~~~~~~~gr~~~E 152 (249)
T 3a2v_A 83 KWKEWIERHIG-----VRIPFPIIADPQGTVARRLGLLHAES----AT-HTVRGVFIVDARGVIRTMLYYPMELGRLVDE 152 (249)
T ss_dssp HHHHHHHHHTC-----CCCCSCEEECTTSHHHHHHTCCCTTC----SS-SCCEEEEEECTTSBEEEEEEECTTBCCCHHH
T ss_pred HHHHHHHHhcC-----CCCceeEEECCchHHHHHhCCccccC----CC-cccceEEEECCCCeEEEEEecCCcccchhHH
Confidence 48899998877 78999999999999999999987654 33 2679999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCCcCCCCCC-----CCceeeCCCCCchhhhccCC-----CCCceeeeeech
Q psy1172 81 ILRVLDSLQLTDTKKVATPVDWKV-----GMEIEVRPGLVSKDSEGKLT-----CKPIFSRIVSLF 136 (276)
Q Consensus 81 ilr~l~~lq~~~~~~~~~p~~w~~-----g~~~~~~p~~~~~~~~~~~~-----~~~w~~~~~~~~ 136 (276)
|+|.|++||.+++++++||||| | |++||++|+++.+||+++|+ +..||+|..++.
T Consensus 153 llr~I~alq~~~~~~~~~Pa~W-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (249)
T 3a2v_A 153 ILRIVKALKLGDSLKRAVPADW-PNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPA 217 (249)
T ss_dssp HHHHHHHHHHHHHHTCBBCTTT-TSBTTTBTCEEECCCCSHHHHHHHHHHTCSEEEETTEEEECCS
T ss_pred HHHHHHHHHhccccCccCCCCC-CCCCCCCCCeecCCCCCHHHHHHhcccCCCccccceeEeeeCC
Confidence 9999999999999999999999 9 99999999999999988764 678999998764
No 7
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.94 E-value=2.8e-27 Score=193.88 Aligned_cols=109 Identities=20% Similarity=0.225 Sum_probs=94.4
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
.+++|++||+|+|++.+|+.++|+ +++||++||+|||++|||+|+.|+|.|++++++|+++|+++++||.|+++.+++|
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~-d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~ 81 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLS-ALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAF 81 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGG-GGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCcCeEeECCCCCEEeHH-HHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHH
Confidence 467999999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccccCC
Q psy1172 232 IKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNTYG 270 (276)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~~ 270 (276)
++++ +++||+++|.++. ++++||+.....+
T Consensus 82 ~~~~------~~~~p~l~D~~~~---v~~~ygv~~~~~~ 111 (157)
T 4g2e_A 82 KEHN------KLNFTILSDYNRE---VVKKYNVAWEFPA 111 (157)
T ss_dssp HHHT------TCCSEEEECTTSH---HHHHTTCEEECTT
T ss_pred HHHc------CCcEEEEEcCCcH---HHHHcCCcccccc
Confidence 9988 8899999997664 6889998755443
No 8
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.1e-26 Score=199.98 Aligned_cols=122 Identities=22% Similarity=0.210 Sum_probs=106.8
Q ss_pred ccccccCCCCCcEEe---cCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHH
Q psy1172 151 IDRFAAALLPGCSLL---GCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVES 227 (276)
Q Consensus 151 ~~~~~G~~aPdF~L~---~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~ 227 (276)
..+++|++||||+++ |.++++++|+ +|+||++||+|||++|||+|+.|++.|++.+++|+++|++||+||+|++++
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLs-d~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~s 99 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLD-KYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYS 99 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGG-GGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHH
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehH-HhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhh
Confidence 356899999999987 4455789999 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccccCCc--ccccC
Q psy1172 228 HHDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLNTYGY--LGTYV 276 (276)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~~~~~--lg~~v 276 (276)
|++|.+..+...++ +++||+++|.++. ++++||++.+..++ +|+||
T Consensus 100 h~aw~~~~~~~~~~~~l~fpllsD~~~~---vak~YGv~~~~~g~~~R~tFi 148 (216)
T 3sbc_A 100 LLAWTNIPRKEGGLGPINIPLLADTNHS---LSRDYGVLIEEEGVALRGLFI 148 (216)
T ss_dssp HHHHHTSCGGGTCCCSCSSCEEECTTSH---HHHHHTCEETTTTEECEEEEE
T ss_pred HHHHHHHHHHhCCccCcccceEeCCCCH---HHHHcCCeeccCCceeeEEEE
Confidence 99999888665554 4789999997765 79999999876654 57775
No 9
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.93 E-value=2.6e-27 Score=195.74 Aligned_cols=107 Identities=22% Similarity=0.236 Sum_probs=99.2
Q ss_pred cccccCCCCCcEEecCCCCeEEecccC--CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSI--PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHH 229 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~--~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~ 229 (276)
.+++|++||+|+|++.+|+.++|+ ++ +||++||+|||++|||+|+.|++.|++++++|+++|++|++||.|+++.++
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Ls-d~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~ 82 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLY-EVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLK 82 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHH-HHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHH
T ss_pred cccCCCCCcCcEeECCCCCEEEHH-HHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHH
Confidence 467999999999999999999999 77 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 230 DWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
+|++++ +++||+++|+++. ++++||++.+.
T Consensus 83 ~~~~~~------~~~fp~l~D~~~~---v~~~ygv~~~~ 112 (164)
T 4gqc_A 83 KFKDEN------RLAFNLLSDYNRE---VIKLYNVYHED 112 (164)
T ss_dssp HHHHHT------TCCSEEEECTTSH---HHHHTTCEEEE
T ss_pred HHHHhc------CcccceeecCchH---HHHHcCCcccc
Confidence 999988 8899999997764 68899997543
No 10
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.93 E-value=2.9e-26 Score=197.67 Aligned_cols=120 Identities=25% Similarity=0.359 Sum_probs=105.8
Q ss_pred ccccCCCCCcE----EecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 153 RFAAALLPGCS----LLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 153 ~~~G~~aPdF~----L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
..+|++||+|+ |+|.+|+.++|+ +|+|||+||+|||++|||+|+.|++.|++.+++|+++|++||+||+|+.++|
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLs-d~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh 104 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLS-SYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAH 104 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGG-GGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCcCCCCcccccccCCCCcEEehH-HhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhH
Confidence 46999999999 457788899999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccccCCc--ccccC
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLNTYGY--LGTYV 276 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~~~~~--lg~~v 276 (276)
++|.++..++.++ +++||+++|.++. ++++||++.+..++ +|+||
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~---va~~yGv~~~~~g~~~R~tFi 152 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKN---IARSYGVLEESQGVAYRGLFI 152 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSH---HHHHTTCEETTTTEECEEEEE
T ss_pred HHHhhhhHHhcCccccccccccCcccH---HHHHcCCcccCCCeeEEEEEE
Confidence 9999887554333 5789999998765 79999999876655 57775
No 11
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.92 E-value=1.4e-25 Score=187.26 Aligned_cols=109 Identities=21% Similarity=0.301 Sum_probs=98.2
Q ss_pred cccccccCCCCCcEEe-cCCCCeEEecccCCCCeEEEEEEcCCCCcccH-HHHHHHHHHHHHHHhCCcEEEE-EeCCChH
Q psy1172 150 LIDRFAAALLPGCSLL-GCQASLVILECSIPAFWGILFSHPSDFTPVCT-TELARVLQLIKEFEQRTCKVIA-LSCDSVE 226 (276)
Q Consensus 150 ~~~~~~G~~aPdF~L~-~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~-~el~~l~~~~~~~~~~gv~Vv~-VS~D~~~ 226 (276)
...+.+|++||+|+|+ +.+|+.++|++.++||++||+|||++|||+|+ .|+|.|++++++|+++|++||+ ||.|+++
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~ 91 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAF 91 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHH
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHH
Confidence 3455789999999999 99999999993379999999999999999999 5999999999999999999997 9999999
Q ss_pred HHHHHHHHHHhcccCCee--EEEeeCCcchhhhhhhhcccccc
Q psy1172 227 SHHDWIKALVRDCILGLL--INLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
.+++|++++ +++ ||+++|.++ +++++||+..+
T Consensus 92 ~~~~f~~~~------~~~~~fp~l~D~~~---~va~~yGv~~~ 125 (173)
T 3mng_A 92 VTGEWGRAH------KAEGKVRLLADPTG---AFGKETDLLLD 125 (173)
T ss_dssp HHHHHHHHT------TCTTTCEEEECTTC---HHHHHHTCBCC
T ss_pred HHHHHHHHh------CCCCceEEEECCCh---HHHHHhCCCcc
Confidence 999999999 666 999999765 47899999866
No 12
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.91 E-value=6.1e-25 Score=185.15 Aligned_cols=107 Identities=17% Similarity=0.242 Sum_probs=98.8
Q ss_pred cccccCCCCCcEEecC--CC-CeEEeccc-CCCCeEEEEEEcCCCCcccHH-HHHHHHHHHHHHHhCCcE-EEEEeCCCh
Q psy1172 152 DRFAAALLPGCSLLGC--QA-SLVILECS-IPAFWGILFSHPSDFTPVCTT-ELARVLQLIKEFEQRTCK-VIALSCDSV 225 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~--~G-~~v~l~~~-~~gk~vvL~f~pa~~cp~C~~-el~~l~~~~~~~~~~gv~-Vv~VS~D~~ 225 (276)
.+.+|++||+|+|++. +| +.++|+ + ++||++||+|||++|||+|+. |+|.|++++++|+++|++ |++||+|++
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~-d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTE-LLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHH-HHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHH-HHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 4689999999999998 89 999999 6 899999999999999999999 899999999999999999 999999999
Q ss_pred HHHHHHHHHHHhcccCCee--EEEeeCCcchhhhhhhhccccccc
Q psy1172 226 ESHHDWIKALVRDCILGLL--INLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
+.+++|++++ +++ ||+++|.++ +++++||+..+.
T Consensus 104 ~~~~~f~~~~------~~~~~fp~l~D~~~---~va~~yGv~~~~ 139 (184)
T 3uma_A 104 HVMGAWATHS------GGMGKIHFLSDWNA---AFTKAIGMEIDL 139 (184)
T ss_dssp HHHHHHHHHH------TCTTTSEEEECTTC---HHHHHTTCEEEE
T ss_pred HHHHHHHHHh------CCCCceEEEEcCch---HHHHHcCCceec
Confidence 9999999999 777 999999765 478999998654
No 13
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.91 E-value=9.9e-25 Score=180.83 Aligned_cols=105 Identities=16% Similarity=0.254 Sum_probs=96.8
Q ss_pred ccccCCCCCcEEe-cCCCCeEEecccC-CCCeEEEEEEcCCCCcccHH-HHHHHHHHHHHHHhCCc-EEEEEeCCChHHH
Q psy1172 153 RFAAALLPGCSLL-GCQASLVILECSI-PAFWGILFSHPSDFTPVCTT-ELARVLQLIKEFEQRTC-KVIALSCDSVESH 228 (276)
Q Consensus 153 ~~~G~~aPdF~L~-~~~G~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~-el~~l~~~~~~~~~~gv-~Vv~VS~D~~~~~ 228 (276)
+.+|+++|+|+|+ +.+|+.++|+ ++ +||++||+|||++|||+|+. |+|.|++++++|+++|+ +||+||+|+++.+
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~-d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~ 81 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMA-ELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVM 81 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHH-HHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHH-HHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHH
Confidence 5689999999999 9999999999 66 99999999999999999999 99999999999999999 9999999999999
Q ss_pred HHHHHHHHhcccCCee--EEEeeCCcchhhhhhhhcccccc
Q psy1172 229 HDWIKALVRDCILGLL--INLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
++|++++ +++ ||+++|.++. ++++||+...
T Consensus 82 ~~~~~~~------~~~~~fp~l~D~~~~---~~~~~gv~~~ 113 (167)
T 2wfc_A 82 DAWGKAH------GADDKVQMLADPGGA---FTKAVDMELD 113 (167)
T ss_dssp HHHHHHT------TCTTTSEEEECTTSH---HHHHTTCEEC
T ss_pred HHHHHhc------CCCcceEEEECCCCc---HHHHcCCccc
Confidence 9999988 777 9999997654 6889998754
No 14
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.90 E-value=5.1e-24 Score=177.40 Aligned_cols=107 Identities=16% Similarity=0.226 Sum_probs=95.8
Q ss_pred ccccCCCCCcEEecCCC-CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcE-EEEEeCCChHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQA-SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCK-VIALSCDSVESHHD 230 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G-~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~-Vv~VS~D~~~~~~~ 230 (276)
.++|++||+|+|++.++ +.++|++.++||++||+|||++|||+|..|++.|++.+++|+++|++ |++||+|+++++++
T Consensus 14 ~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~ 93 (171)
T 2xhf_A 14 IKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAA 93 (171)
T ss_dssp CCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHH
T ss_pred ccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHH
Confidence 47999999999995432 89999933699999999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHhcccCCe--eEEEeeCCcchhhhhhhhccccccc
Q psy1172 231 WIKALVRDCILGL--LINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 231 ~~~~~~~~~~~~~--~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|.++. ++ +|++++|.++ +++++||+..+.
T Consensus 94 w~~~~------~~~~~f~lLSD~~~---~~a~ayGv~~~~ 124 (171)
T 2xhf_A 94 WGKTV------DPEHKIRMLADMHG---EFTRALGTELDS 124 (171)
T ss_dssp HHHHH------CTTCCSEEEECTTS---HHHHHHTCBCCC
T ss_pred HHHhc------CCCCCeEEEEeCCc---hHHHHhCCceec
Confidence 99998 55 8999999765 479999998764
No 15
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.90 E-value=7e-24 Score=174.22 Aligned_cols=105 Identities=19% Similarity=0.304 Sum_probs=96.1
Q ss_pred ccccCCCCCcEEe--cCCC--CeEEeccc-CCCCeEEEEEEcCCCCcccH-HHHHHHHHHHHHHHhCCcE-EEEEeCCCh
Q psy1172 153 RFAAALLPGCSLL--GCQA--SLVILECS-IPAFWGILFSHPSDFTPVCT-TELARVLQLIKEFEQRTCK-VIALSCDSV 225 (276)
Q Consensus 153 ~~~G~~aPdF~L~--~~~G--~~v~l~~~-~~gk~vvL~f~pa~~cp~C~-~el~~l~~~~~~~~~~gv~-Vv~VS~D~~ 225 (276)
+.+|+.+|+|+|+ +.+| +.++|+ + ++||++||+|||++|||+|+ .|+|.|++++++|+++|++ |++||+|++
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~-~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~ 82 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVH-SLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDP 82 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESH-HHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHH-HHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCH
Confidence 5689999999996 8899 999999 6 89999999999999999999 9999999999999999999 999999999
Q ss_pred HHHHHHHHHHHhcccCCe--eEEEeeCCcchhhhhhhhcccccc
Q psy1172 226 ESHHDWIKALVRDCILGL--LINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+.+++|.+++ ++ +|++++|.++ +++++||+..+
T Consensus 83 ~~~~~~~~~~------~~~~~~~~l~D~~~---~~~~~~gv~~~ 117 (162)
T 1tp9_A 83 FVMKAWAKSY------PENKHVKFLADGSA---TYTHALGLELD 117 (162)
T ss_dssp HHHHHHHHTC------TTCSSEEEEECTTS---HHHHHTTCEEE
T ss_pred HHHHHHHHhc------CCCCCeEEEECCCc---hHHHHcCcccc
Confidence 9999999988 66 7999999764 46889999754
No 16
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.89 E-value=3.6e-24 Score=178.82 Aligned_cols=115 Identities=23% Similarity=0.216 Sum_probs=99.3
Q ss_pred cccCCCCcccccccCC----CCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEE
Q psy1172 143 QFAVPGGLIDRFAAAL----LPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVI 218 (276)
Q Consensus 143 ~~a~~~~~~~~~~G~~----aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv 218 (276)
++++......+.+|+. +|+|+|++.+|+.++|+ +|+||++||+||+++|||+|+.|++.|++++++|+++|++||
T Consensus 11 ~~~~~~~~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~-d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv 89 (179)
T 3ixr_A 11 SSGLVPRGSHMNIGDTLNHSLLNHPLMLSGSTCKTLS-DYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVL 89 (179)
T ss_dssp -------CCSSCTTCBCCHHHHHCCEEEGGGEEECGG-GGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred ccCcccCCcccCcCcccCCcCCCeeEECCCCCEEeHH-HHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEE
Confidence 3445555556677887 99999999999999999 899999999999999999999999999999999999999999
Q ss_pred EEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 219 ALSCDSVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 219 ~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+||.|+++.+++|++++ +++|++++|.+. +++++||+...
T Consensus 90 ~Vs~D~~~~~~~~~~~~------~~~f~~l~D~~~---~~~~~~gv~~~ 129 (179)
T 3ixr_A 90 GVSRDSVKSHDSFCAKQ------GFTFPLVSDSDA---ILCKAFDVIKE 129 (179)
T ss_dssp EEESCCHHHHHHHHHHH------TCCSCEEECTTC---HHHHHTTCEEE
T ss_pred EEcCCCHHHHHHHHHHc------CCceEEEECCch---HHHHHcCCccc
Confidence 99999999999999998 889999999665 46888998754
No 17
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.89 E-value=1.6e-23 Score=174.90 Aligned_cols=108 Identities=12% Similarity=0.218 Sum_probs=95.8
Q ss_pred cccccCCCCCcEEecCCC----------CeEEecccCCCCeEEEEEEcCCCCcccHH-HHHHHHHHHHHHHhCCc-EEEE
Q psy1172 152 DRFAAALLPGCSLLGCQA----------SLVILECSIPAFWGILFSHPSDFTPVCTT-ELARVLQLIKEFEQRTC-KVIA 219 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G----------~~v~l~~~~~gk~vvL~f~pa~~cp~C~~-el~~l~~~~~~~~~~gv-~Vv~ 219 (276)
..++|+++|++++....+ ++++|++.++||++||+|||++|||+|+. |++.|++.+++|+++|+ +|++
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vig 88 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWC 88 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 468999999999876533 57899833499999999999999999999 99999999999999999 9999
Q ss_pred EeCCChHHHHHHHHHHHhcccCCee--EEEeeCCcchhhhhhhhccccccc
Q psy1172 220 LSCDSVESHHDWIKALVRDCILGLL--INLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 220 VS~D~~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
||+|+++++++|+++. +++ |++++|.++ +++++||+..+.
T Consensus 89 IS~D~~~~~~~f~~~~------~l~~~f~lLsD~~~---~va~ayGv~~~~ 130 (176)
T 4f82_A 89 VSVNDAFVMGAWGRDL------HTAGKVRMMADGSA---AFTHALGLTQDL 130 (176)
T ss_dssp EESSCHHHHHHHHHHT------TCTTTSEEEECTTC---HHHHHHTCEEEC
T ss_pred EeCCCHHHHHHHHHHh------CCCCCceEEEcCch---HHHHHhCCCccc
Confidence 9999999999999998 677 999999765 479999998764
No 18
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.89 E-value=1.4e-23 Score=176.56 Aligned_cols=106 Identities=13% Similarity=0.230 Sum_probs=94.3
Q ss_pred cccCCCCCcEEec--C---------CC----CeEEecccCCCCeEEEEEEcCCCCcccH-HHHHHHHHHHHHH-HhCCcE
Q psy1172 154 FAAALLPGCSLLG--C---------QA----SLVILECSIPAFWGILFSHPSDFTPVCT-TELARVLQLIKEF-EQRTCK 216 (276)
Q Consensus 154 ~~G~~aPdF~L~~--~---------~G----~~v~l~~~~~gk~vvL~f~pa~~cp~C~-~el~~l~~~~~~~-~~~gv~ 216 (276)
++|+++|+|+|++ . +| +.++|++.++||++||+|||++|||+|. .|++.|++.+++| +++|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5899999999998 4 67 6899984489999999999999999999 9999999999999 999995
Q ss_pred -EEEEeCCChHHHHHHHHHHHhcccCCe-eEEEeeCCcchhhhhhhhccccccc
Q psy1172 217 -VIALSCDSVESHHDWIKALVRDCILGL-LINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 217 -Vv~VS~D~~~~~~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|++||+|+++++++|.+++ ++ +|++++|.++. ++++||+..+.
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~------~~~~f~lLsD~~~~---~a~~yGv~~~~ 126 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSM------DIKKIKYISDGNSS---FTDSMNMLVDK 126 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHT------TCCSSEEEECTTSH---HHHHTTCEEEC
T ss_pred EEEEEeCCCHHHHHHHHHHc------CCCCceEEEeCchH---HHHHhCCceec
Confidence 9999999999999999988 66 69999997654 79999998654
No 19
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.88 E-value=2.6e-23 Score=183.65 Aligned_cols=115 Identities=25% Similarity=0.258 Sum_probs=100.4
Q ss_pred cccccCCCCCcEEecC---CCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 152 DRFAAALLPGCSLLGC---QASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~---~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
.+.+|++||+|+|++. +|+.++|+ +|+||++||+|||++|||+|..|++.|++++++|+++|++||+||+|+++.+
T Consensus 61 ~l~vG~~aPdF~l~~l~d~~G~~vsLs-d~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~ 139 (254)
T 3tjj_A 61 KAKISKPAPYWEGTAVIDGEFKELKLT-DYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 139 (254)
T ss_dssp CCCTTSBCCCCEEEEEETTEEEEEEGG-GGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred ccCCCCCCCCcEeeeecCCCCcEEeHH-HHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHH
Confidence 4579999999998854 56799999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccccCC
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLNTYG 270 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~~~~ 270 (276)
++|++.+.+..++ +++||+++|.++ +++++||+..+..+
T Consensus 140 ~~~~~~~~~~~g~~~~~fp~l~D~~~---~va~~ygv~~~~~g 179 (254)
T 3tjj_A 140 LAWINTPRRQGGLGPIRIPLLSDLTH---QISKDYGVYLEDSG 179 (254)
T ss_dssp HHHHTSCGGGTSCCSCSSCEEECTTS---HHHHHHTCEETTTT
T ss_pred HHHHHHHHHhcCCcccccceeeCcHH---HHHHHcCCccccCC
Confidence 9999887665444 578999999764 47899999765433
No 20
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.88 E-value=8.7e-23 Score=166.97 Aligned_cols=104 Identities=18% Similarity=0.109 Sum_probs=96.1
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCe-EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFW-GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~-vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
+.+|+++|+|+|++.+|+.++++ +++||+ +||+|||++|||+|+.+++.|++++++|+++|++||+||+|+++..++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~-~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLS-DYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGG-GTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHH-HhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 56899999999999999999999 899998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCeeEEEeeCCcchhhhhhhhccccc
Q psy1172 232 IKALVRDCILGLLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
.+++ +++|++++|.+. .+++.||+..
T Consensus 81 ~~~~------~~~~~~~~d~~~---~~~~~~~v~~ 106 (161)
T 3drn_A 81 KEKY------KLPFILVSDPDK---KIRELYGAKG 106 (161)
T ss_dssp HHHT------TCCSEEEECTTS---HHHHHTTCCC
T ss_pred HHHh------CCCceEEECCcH---HHHHHcCCCC
Confidence 9988 889999999654 4678888864
No 21
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.88 E-value=4.7e-23 Score=179.65 Aligned_cols=105 Identities=18% Similarity=0.241 Sum_probs=96.0
Q ss_pred ccccCCCCCcEEecC-CCC--eEEeccc-CCCCeEEEEEEcCCCCcccH-HHHHHHHHHHHHHHhCCc-EEEEEeCCChH
Q psy1172 153 RFAAALLPGCSLLGC-QAS--LVILECS-IPAFWGILFSHPSDFTPVCT-TELARVLQLIKEFEQRTC-KVIALSCDSVE 226 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~-~G~--~v~l~~~-~~gk~vvL~f~pa~~cp~C~-~el~~l~~~~~~~~~~gv-~Vv~VS~D~~~ 226 (276)
+.+|+++|+|+|++. +|+ .++|+ + ++||++||+|||++|||+|+ .|+|.|++++++|+++|+ +|++||+|+++
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~-~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~ 81 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTS-ELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTF 81 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHH-HHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHH-HHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHH
Confidence 568999999999997 777 89999 7 89999999999999999999 999999999999999999 99999999999
Q ss_pred HHHHHHHHHHhcccCCee-EEEeeCCcchhhhhhhhcccccc
Q psy1172 227 SHHDWIKALVRDCILGLL-INLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
.+++|.+++ +++ |++++|.++. ++++||+...
T Consensus 82 ~~~~~~~~~------~~~~~~~l~D~~~~---~~~~~gv~~~ 114 (241)
T 1nm3_A 82 VMNAWKEDE------KSENISFIPDGNGE---FTEGMGMLVG 114 (241)
T ss_dssp HHHHHHHHT------TCTTSEEEECTTSH---HHHHTTCEEE
T ss_pred HHHHHHHhc------CCCceEEEECCCcH---HHHHhCceee
Confidence 999999988 676 9999997654 6889999754
No 22
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.88 E-value=6.5e-23 Score=167.42 Aligned_cols=105 Identities=25% Similarity=0.316 Sum_probs=97.4
Q ss_pred cccccCCCCCcE--EecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHH
Q psy1172 152 DRFAAALLPGCS--LLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHH 229 (276)
Q Consensus 152 ~~~~G~~aPdF~--L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~ 229 (276)
.+.+|+++|+|+ |++.+|++++|+ +++||++||+||+++|||+|..+++.|++++++|+++|++||+||+|+++.++
T Consensus 6 ~l~~G~~~P~f~~~l~~~~G~~~~l~-~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~ 84 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLSGGTQTTLR-AHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHD 84 (163)
T ss_dssp CCCCCCCGGGGGCCEECSTTCEECSG-GGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred ccccCCcCCCccccccCCCCCEEEHH-HhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 367999999999 999999999999 89999999999977999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccc
Q psy1172 230 DWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
+|++++ +++|++++|.+. +++++||+..
T Consensus 85 ~~~~~~------~~~~~~~~d~~~---~~~~~~~v~~ 112 (163)
T 3gkn_A 85 NFCAKQ------GFAFPLVSDGDE---ALCRAFDVIK 112 (163)
T ss_dssp HHHHHH------CCSSCEEECTTC---HHHHHTTCEE
T ss_pred HHHHHh------CCCceEEECCcH---HHHHHhCCcc
Confidence 999998 889999999665 4688899875
No 23
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.88 E-value=9.6e-23 Score=167.17 Aligned_cols=104 Identities=20% Similarity=0.134 Sum_probs=94.8
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
.+.+|+.+|+|+|++.+|+.++|+ +++||++||+||+++|||+|+.|++.|++++++| +|++||+||.|+++.+++|
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~-~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~ 91 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLA-DFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRW 91 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGG-GGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHH-HhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHH
Confidence 457899999999999999999999 8999999999998899999999999999999999 7999999999999999999
Q ss_pred HHHHHhcccCCe-eEEEeeC-Ccchhhhhhhhcccccc
Q psy1172 232 IKALVRDCILGL-LINLSVD-DFKEVEGRSRRFQESLN 267 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D-~~~~~~~~a~~ygv~~~ 267 (276)
.+++ ++ +|++++| .++ .++++||+...
T Consensus 92 ~~~~------~~~~~~~l~D~~~~---~~~~~~gv~~~ 120 (163)
T 1psq_A 92 CGAE------GLDNAIMLSDYFDH---SFGRDYALLIN 120 (163)
T ss_dssp HHHH------TCTTSEEEECTTTC---HHHHHHTCBCT
T ss_pred HHhc------CCCCcEEecCCchh---HHHHHhCCccc
Confidence 9998 77 8999998 544 46888998754
No 24
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.88 E-value=1.1e-22 Score=175.93 Aligned_cols=109 Identities=24% Similarity=0.302 Sum_probs=96.6
Q ss_pred ccccCCCCCcEEecC--CC--CeEEecccC-CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHH
Q psy1172 153 RFAAALLPGCSLLGC--QA--SLVILECSI-PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVES 227 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~--~G--~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~ 227 (276)
+.+|+++|+|+|++. +| +.++|+ ++ +||++||+|||++|||+|+.|+|.|++++++|+++|++||+||+|+++.
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~-d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 103 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLS-SFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYS 103 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGG-GGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHH-HHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 578999999999999 89 899999 78 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccc
Q psy1172 228 HHDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
+++|.+++.+..++ +++|++++|.++ +++++||+.
T Consensus 104 ~~~~~~~~~~~~g~~~~~fp~l~D~~~---~~~~~ygv~ 139 (221)
T 2c0d_A 104 HLAWKNMPIEKGGIGNVEFTLVSDINK---DISKNYNVL 139 (221)
T ss_dssp HHHHHHSCGGGTCCCSCSSEEEECTTS---HHHHHTTCE
T ss_pred HHHHHHHhhhhcCccCCceEEEECCch---HHHHHcCCc
Confidence 99998887544333 468999999654 468889986
No 25
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.88 E-value=3.7e-23 Score=180.45 Aligned_cols=110 Identities=31% Similarity=0.498 Sum_probs=97.9
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCC-eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAF-WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk-~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
+.+|+.+|+|++++.+| .++|+ +++|+ ++||+|||++|||+|+.|++.|++++++|+++|++||+||+|+.+++++|
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~-d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~ 80 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFH-DWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEW 80 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHH-HHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHH-HHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 56899999999999999 89998 88887 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccC--CeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 232 IKALVRDCIL--GLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 232 ~~~~~~~~~~--~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
.+...+..+. +++||+++|.++ +++++||+...
T Consensus 81 ~~~i~~~~~~~~~~~fpil~D~~~---~va~~ygv~~~ 115 (233)
T 2v2g_A 81 SEDVKCLSGVKGDMPYPIIADETR---ELAVKLGMVDP 115 (233)
T ss_dssp HHHHHHHHTCCSSCSSCEEECTTC---HHHHHTTCEEE
T ss_pred HHHHHHhhCcccCCceEEEECChH---HHHHHhCCcCc
Confidence 9977654334 568999999655 46889998743
No 26
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.88 E-value=5.9e-23 Score=167.51 Aligned_cols=106 Identities=21% Similarity=0.194 Sum_probs=96.2
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCC--eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAF--WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHH 229 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk--~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~ 229 (276)
.+.+|+.+|+|+|++.+|+.++|+ +++|| ++||+||+++|||+|+.++|.|++++++|+++| +||+||.|+++.++
T Consensus 6 ~~~~G~~~P~f~l~~~~G~~v~l~-~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~ 83 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNEDNDSISLK-KITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQK 83 (159)
T ss_dssp CCCTTCBCCSCEEECTTSCEEEHH-HHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHH-HHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHH
Confidence 457899999999999999999999 88887 899999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 230 DWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
+|.+++ +++|++++|.++ +++++||+...+
T Consensus 84 ~~~~~~------~~~~~~l~D~~~---~~~~~~gv~~~p 113 (159)
T 2a4v_A 84 KFQSKQ------NLPYHLLSDPKR---EFIGLLGAKKTP 113 (159)
T ss_dssp HHHHHH------TCSSEEEECTTC---HHHHHHTCBSSS
T ss_pred HHHHHh------CCCceEEECCcc---HHHHHhCCcccc
Confidence 999988 789999999654 468889987654
No 27
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.87 E-value=9.8e-23 Score=167.59 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=93.3
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWI 232 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~ 232 (276)
+.+|+.+|+|+|++.+|+.++|+ +++||++||+||+++|||+|+.|++.|++++++| +|++||+||.|+++.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~-~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALN-DFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGG-GGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehH-HhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 56899999999999999999999 8999999999999999999999999999999999 89999999999999888888
Q ss_pred HHHHhcccCCe-eEEEeeCC-cchhhhhhhhcccccc
Q psy1172 233 KALVRDCILGL-LINLSVDD-FKEVEGRSRRFQESLN 267 (276)
Q Consensus 233 ~~~~~~~~~~~-~~~~l~D~-~~~~~~~a~~ygv~~~ 267 (276)
+++ ++ +|++++|. ++ .++++||+...
T Consensus 94 ~~~------~~~~~~~l~D~~~~---~~~~~~gv~~~ 121 (165)
T 1q98_A 94 GAE------GIENAKTVSTFRNH---ALHSQLGVDIQ 121 (165)
T ss_dssp TTT------TCTTEEEEECTTCT---HHHHHTTCEEC
T ss_pred HHc------CCCceEEeeccccc---hHHHHhCceec
Confidence 777 77 79999986 33 46888998753
No 28
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.87 E-value=9.3e-23 Score=169.41 Aligned_cols=107 Identities=15% Similarity=0.218 Sum_probs=92.2
Q ss_pred cccccCCCCCcEEecC----CC-----CeEEecccC-CCCeEEEEEEcCCCCcccHHH-HHHHHHHHHHHHhCCcE-EEE
Q psy1172 152 DRFAAALLPGCSLLGC----QA-----SLVILECSI-PAFWGILFSHPSDFTPVCTTE-LARVLQLIKEFEQRTCK-VIA 219 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~----~G-----~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~e-l~~l~~~~~~~~~~gv~-Vv~ 219 (276)
+..+|+++|+|+|++. +| +.++|+ ++ +||++||+|||++|||+|+.| +|.|++++++|+++|++ |++
T Consensus 6 g~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~-~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~ 84 (171)
T 2pwj_A 6 GTDILSAASNVSLQKARTWDEGVESKFSTTPVN-DIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVIC 84 (171)
T ss_dssp ----CCCSSSBCCCSCEECCCSSCTTCCCEEHH-HHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEE
T ss_pred cccccCcCCCeEEecccccccCCccCcceEEHH-HHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 4457889999999998 57 899999 75 999888888889999999999 99999999999999999 999
Q ss_pred EeCCChHHHHHHHHHHHhcccCCe--eEEEeeCCcchhhhhhhhccccccc
Q psy1172 220 LSCDSVESHHDWIKALVRDCILGL--LINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 220 VS~D~~~~~~~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
||+|+++.+++|.+++ ++ +||+++|.++. ++++||+....
T Consensus 85 Is~d~~~~~~~~~~~~------~~~~~fp~l~D~~~~---~~~~ygv~~~~ 126 (171)
T 2pwj_A 85 VAINDPYTVNAWAEKI------QAKDAIEFYGDFDGS---FHKSLELTTDL 126 (171)
T ss_dssp EESSCHHHHHHHHHHT------TCTTTSEEEECTTCH---HHHHHTCEEEC
T ss_pred EeCCCHHHHHHHHHHh------CCCCceEEEECCccH---HHHHhCCcccc
Confidence 9999999999999988 54 79999997654 68899998653
No 29
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.87 E-value=6.5e-23 Score=176.00 Aligned_cols=112 Identities=26% Similarity=0.266 Sum_probs=96.7
Q ss_pred cccccCCCCCcEEecC---CCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 152 DRFAAALLPGCSLLGC---QASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~---~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
.+.+|+++|+|+|++. +|+.++|+ +++||++||+|||++|||+|+.|++.|++++++|+++|++||+||+|+++.+
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~-d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 96 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLT-DYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 96 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGG-GGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHH-HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4568999999999985 45899999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
++|++++.+..++ +++|++++|.++ +++++||+..+
T Consensus 97 ~~~~~~~~~~~g~~~~~fp~l~D~~~---~~~~~ygv~~~ 133 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPIRIPLLSDLTH---QISKDYGVYLE 133 (211)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTS---HHHHHTTCEET
T ss_pred HHHHHHhhhccCccCCceEEEECCch---HHHHHcCCccc
Confidence 9998877544333 468999999654 46889998643
No 30
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.87 E-value=1.5e-22 Score=166.46 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=95.0
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
.+.+|+++|+|+|++.+|+.++|+ +++||++||+||+++|||+|+.|++.|++++++ +|++||+||.|+++.+++|
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~-~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLA-DYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGG-GGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHH-HhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 456899999999999999999999 899999999999999999999999999999988 8899999999999999999
Q ss_pred HHHHHhcccCCe-eEEEeeCC-cchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGL-LINLSVDD-FKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D~-~~~~~~~a~~ygv~~~~ 268 (276)
++++ ++ +|++++|. +. +++++||+....
T Consensus 95 ~~~~------~~~~~~~l~D~~~~---~~~~~~gv~~~~ 124 (166)
T 3p7x_A 95 CASA------GLDNVITLSDHRDL---SFGENYGVVMEE 124 (166)
T ss_dssp HHHH------TCSSCEEEECTTTC---HHHHHHTCEETT
T ss_pred HHHc------CCCceEEccCCchh---HHHHHhCCcccc
Confidence 9998 88 79999997 54 468899998643
No 31
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.87 E-value=1.9e-22 Score=174.79 Aligned_cols=111 Identities=34% Similarity=0.456 Sum_probs=97.6
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCC-eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAF-WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHD 230 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk-~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~ 230 (276)
.+.+|+.+|+|++++.+| .++|+ +++|+ ++||+|||++|||+|+.|++.|++++++|+++|++||+||+|+.+++++
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~-d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~ 81 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFH-DFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLA 81 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHH-HHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred cCCCcCCCCCcEEecCCC-CEEHH-HHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 356899999999999999 99998 88887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccc----CCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 231 WIKALVRDCI----LGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 231 ~~~~~~~~~~----~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
|.+...+..+ .+++||+++|.++ +++++||+...
T Consensus 82 ~~~~i~~~~~~~~~~~~~fpil~D~~~---~va~~ygv~~~ 119 (224)
T 1prx_A 82 WSKDINAYNSEEPTEKLPFPIIDDRNR---ELAILLGMLDP 119 (224)
T ss_dssp HHHHHHHHTTSCCCSCCSSCEEECTTC---HHHHHTTSSCS
T ss_pred HHHHHHHhhCcccccCcCcceeecCch---HHHHHhCCCCc
Confidence 9998655433 3778999999655 46889998753
No 32
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.87 E-value=2.1e-22 Score=176.31 Aligned_cols=115 Identities=24% Similarity=0.256 Sum_probs=99.6
Q ss_pred cccccCCCCCcEEecC-C--CCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 152 DRFAAALLPGCSLLGC-Q--ASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~-~--G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
.+.+|+++|+|+|++. + |++++|+ +|+||++||+||+++|||+|+.|++.|++++++|+++|++||+||+|+++.+
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLs-d~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~ 125 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLS-DYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTH 125 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGG-GGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHH-HhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3569999999998864 4 5699999 8999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccccCC
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLNTYG 270 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~~~~ 270 (276)
++|++.+.+..++ +++||+++|.++ +++++||+..+..+
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~~---~v~~~ygv~~~~~g 165 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLTH---QISKDYGVYLEDQG 165 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTS---HHHHHTTCEETTTT
T ss_pred HHHHHHHHhhcCCCCCceeEEeCchH---HHHHHhCCccccCC
Confidence 9999887655443 568999999764 47899999865443
No 33
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.87 E-value=2.4e-22 Score=168.81 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=94.3
Q ss_pred cccCCCCCcEEecC-CC--CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHH
Q psy1172 154 FAAALLPGCSLLGC-QA--SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHD 230 (276)
Q Consensus 154 ~~G~~aPdF~L~~~-~G--~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~ 230 (276)
.+|+++|+|+|++. +| +.++|+ +++||++||+||+++|||+|+.|++.|++++++|+++|++||+||+|+++.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~-~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEK-DTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHH-HHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHH-HHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 47999999999999 58 899999 899999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
|++++..-. +++|++++|.++ +++++||+...
T Consensus 81 ~~~~~~~~~--~~~fp~l~D~~~---~~~~~ygv~~~ 112 (186)
T 1n8j_A 81 WHSSSETIA--KIKYAMIGDPTG---ALTRNFDNMRE 112 (186)
T ss_dssp HHHHCTTGG--GCCSEEEECTTS---HHHHHTTCEET
T ss_pred HHHHcCccc--CCceeEEECCch---HHHHHhCCccC
Confidence 988762111 357999999654 46888998754
No 34
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.87 E-value=1.7e-22 Score=171.95 Aligned_cols=105 Identities=19% Similarity=0.115 Sum_probs=95.5
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
.+.+|+++|+|+|++.+|+.++|+ +++||++||+||+++|||+|+.|++.|++++++| +|++||+||.|+++.+++|
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~-d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALS-SFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGG-GGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEcHH-HhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 356899999999999999999999 8999999999999999999999999999999999 7899999999999998888
Q ss_pred HHHHHhcccCCe-eEEEeeCC-cchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGL-LINLSVDD-FKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D~-~~~~~~~a~~ygv~~~~ 268 (276)
++++ ++ +|++++|. ++ +++++||+....
T Consensus 128 ~~~~------~~~~f~~l~D~~~~---~~~~~ygv~~~~ 157 (200)
T 3zrd_A 128 CGAE------GLSNVITLSTLRGA---DFKQAYGVAITE 157 (200)
T ss_dssp TTTT------TCTTEEEEETTSCT---HHHHHTTCEECS
T ss_pred HHHc------CCCCceEEecCchH---HHHHHhCceeec
Confidence 8887 88 89999997 44 468899998654
No 35
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.87 E-value=3e-22 Score=172.12 Aligned_cols=116 Identities=20% Similarity=0.238 Sum_probs=98.9
Q ss_pred CCCcccccccCCCCCcEEecC--CC--CeEEecccC-CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe
Q psy1172 147 PGGLIDRFAAALLPGCSLLGC--QA--SLVILECSI-PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS 221 (276)
Q Consensus 147 ~~~~~~~~~G~~aPdF~L~~~--~G--~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS 221 (276)
......+.+|+++|+|+|++. +| +.++|+ ++ +||++||+|||++|||+|..+++.|++++++|+++|++||+||
T Consensus 15 ~~~~~~l~~G~~aP~f~l~~~~~~G~~~~v~l~-d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 93 (213)
T 2i81_A 15 VPRGSPTYVGKEAPFFKAEAVFGDNSFGEVNLT-QFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCS 93 (213)
T ss_dssp -----CCCBTSBCCCCEEEEECTTSCEEEEEGG-GGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred cCCCccccCCCcCCCeEeeccccCCceeEEeHH-HHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 334446689999999999999 89 899999 78 9999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhccccc
Q psy1172 222 CDSVESHHDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 222 ~D~~~~~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
+|+++.+++|.+.+.+..++ +++||+++|.+. +++++||+..
T Consensus 94 ~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~---~~~~~ygv~~ 136 (213)
T 2i81_A 94 VDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITK---SISKDYNVLF 136 (213)
T ss_dssp SSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTS---HHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHhhCCccCCCceEEECCch---HHHHHhCCcc
Confidence 99999999998877554444 468999999654 4688899874
No 36
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.86 E-value=5.3e-22 Score=171.79 Aligned_cols=102 Identities=21% Similarity=0.104 Sum_probs=92.6
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccH-----HHHHHHHHHHHHHHhCCcEEEEEeCCChH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCT-----TELARVLQLIKEFEQRTCKVIALSCDSVE 226 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~-----~el~~l~~~~~~~~~~gv~Vv~VS~D~~~ 226 (276)
.+.+|++||+|+|++.+|+.++|+ +|+||++||+|||+.|||+|+ .|++.|++. | +|++||+||+|+++
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLs-d~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALE-SFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGG-GGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHH-HhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 356899999999999999999999 799999999999999999999 999999987 4 78999999999999
Q ss_pred HHHHHHHHHHhcccCCe-eEEEeeCC-cchhhhhhhhccccccc
Q psy1172 227 SHHDWIKALVRDCILGL-LINLSVDD-FKEVEGRSRRFQESLNT 268 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~l~D~-~~~~~~~a~~ygv~~~~ 268 (276)
.+++|++++ ++ +|++++|. ++ +++++||+..+.
T Consensus 95 ~~~~f~~~~------gl~~fplLsD~~~~---~vak~yGv~~~~ 129 (224)
T 3keb_A 95 SLARARHEH------GLPNIALLSTLRGR---DFHKRYGVLITE 129 (224)
T ss_dssp HHHHHHHHH------CCTTCEEEESTTCT---THHHHTTCBCCS
T ss_pred HHHHHHHHc------CCCCceEEEcCCch---HHHHHhCCcccc
Confidence 999999999 77 69999997 34 478999998754
No 37
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.86 E-value=3.5e-22 Score=175.83 Aligned_cols=113 Identities=27% Similarity=0.417 Sum_probs=100.7
Q ss_pred cccccCCCCCcEEecCCCCeEEe-cccC--CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVIL-ECSI--PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l-~~~~--~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
.+.+|+++|+|++++.+| .++| + ++ +||++||+|||++|||+|..|++.|++++++|+++|++||+||+|+.+++
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~-d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~ 81 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPD-HYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSH 81 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETH-HHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHH-HHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHH
Confidence 357899999999999999 7999 8 78 99999999989999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccccC
Q psy1172 229 HDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNTY 269 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~ 269 (276)
.+|.+...+..+.+++||+++|.++. ++++||+..+..
T Consensus 82 ~~w~~~~~~~~~~~i~fPil~D~~~~---ia~~ygv~~~~~ 119 (249)
T 3a2v_A 82 IKWKEWIERHIGVRIPFPIIADPQGT---VARRLGLLHAES 119 (249)
T ss_dssp HHHHHHHHHHTCCCCCSCEEECTTSH---HHHHHTCCCTTC
T ss_pred HHHHHHHHHhcCCCCceeEEECCchH---HHHHhCCccccC
Confidence 99999887655567899999996554 688999986543
No 38
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.86 E-value=8.2e-22 Score=162.69 Aligned_cols=104 Identities=13% Similarity=0.249 Sum_probs=94.0
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
.+.+|+++|+|+|++.+|+.++++ +++||++||+||+++|||+|+.+++.|++++++| ++++||+||.|+++.+++|
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~-~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 96 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVG-GAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRF 96 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEES-SCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred cCCCCCcCCceEEECCCCCEeeHH-HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHH
Confidence 356899999999999999999999 8999999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHhcccCCe-eEEEeeC-Ccchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGL-LINLSVD-DFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D-~~~~~~~~a~~ygv~~~~ 268 (276)
.+++ ++ +|++++| .+.. + ++||+....
T Consensus 97 ~~~~------~~~~~~~l~D~~~~~---~-~~~gv~~~~ 125 (171)
T 2yzh_A 97 CESF------NIQNVTVASDFRYRD---M-EKYGVLIGE 125 (171)
T ss_dssp HHHT------TCCSSEEEECTTTCG---G-GGGTCBBCS
T ss_pred HHHc------CCCCeEEeecCccCc---H-HHhCCEecc
Confidence 9988 77 8999998 5443 6 789987543
No 39
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.86 E-value=3.8e-22 Score=181.92 Aligned_cols=106 Identities=21% Similarity=0.137 Sum_probs=93.3
Q ss_pred CCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHH
Q psy1172 157 ALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALV 236 (276)
Q Consensus 157 ~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~ 236 (276)
.++|+|+|++.+|++++|+ +|+||+|||+|||++|||+|+.|++.|++ ...+|++|+|||+|+++++++|++++
T Consensus 2 ak~p~F~l~~~~G~~~~Ls-d~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D~~~~~~~f~~~~- 75 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHV-DLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRDSVEALKRFKEKN- 75 (322)
T ss_dssp CBCCCCEEEETTSCEEEGG-GTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESCCHHHHHHHHHHH-
T ss_pred CCCCCcEEECCCcCEEeHH-HhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCCCHHHHHHHHHhh-
Confidence 4689999999999999999 89999999999999999999999999865 23468999999999999999999999
Q ss_pred hcccCCeeEEEeeCCcchhhhhhhhcccccccCCcccccC
Q psy1172 237 RDCILGLLINLSVDDFKEVEGRSRRFQESLNTYGYLGTYV 276 (276)
Q Consensus 237 ~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~~~lg~~v 276 (276)
+++||+++|.++. ++++||+......+.+|||
T Consensus 76 -----~l~fp~l~D~~~~---v~~~ygv~~~~~~~r~tfi 107 (322)
T 4eo3_A 76 -----DLKVTLLSDPEGI---LHEFFNVLENGKTVRSTFL 107 (322)
T ss_dssp -----TCCSEEEECTTCH---HHHHTTCEETTEECCEEEE
T ss_pred -----CCceEEEEcCchH---HHHhcCCCCCCcCccEEEE
Confidence 8899999997664 7899999866555566664
No 40
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.86 E-value=3.1e-22 Score=173.05 Aligned_cols=110 Identities=32% Similarity=0.522 Sum_probs=96.5
Q ss_pred ccccCCCCCcEEecC--CCCeEEecccCCCC-eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHH
Q psy1172 153 RFAAALLPGCSLLGC--QASLVILECSIPAF-WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHH 229 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~--~G~~v~l~~~~~gk-~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~ 229 (276)
+.+|+.+|+|++++. +| .++|+ +|+|| ++||+|||++|||+|+.|++.|++++++|+++|++||+||+|+.++++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~-d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~ 80 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELY-KYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHD 80 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHH-HHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHH-HHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence 568999999999999 89 89998 89998 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-ccCCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 230 DWIKALVRD-CILGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 230 ~~~~~~~~~-~~~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+|.+...+. .+.+++||+++|.++ +++++||+..+
T Consensus 81 ~~~~~i~~~~~~~~~~fpil~D~~~---~va~~ygv~~~ 116 (220)
T 1xcc_A 81 KWIEDIKYYGKLNKWEIPIVCDESR---ELANKLKIMDE 116 (220)
T ss_dssp HHHHHHHHHHTCSCCCCCEEECTTS---HHHHHHTCEEE
T ss_pred HHHHHHHHHhcCCCCcceeEECchh---HHHHHhCCCCc
Confidence 999876532 123778999999655 46889998743
No 41
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.86 E-value=7.5e-22 Score=167.58 Aligned_cols=112 Identities=28% Similarity=0.339 Sum_probs=98.5
Q ss_pred cccccCCCCCcEEecC--CC--CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHH
Q psy1172 152 DRFAAALLPGCSLLGC--QA--SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVES 227 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~--~G--~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~ 227 (276)
.+.+|+++|+|+|++. +| +.++|+ +++||++||+|||++|||+|..+++.|++++++|+++|++||+||+|+++.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~-~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALT-SYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGG-GGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHH-HhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 4578999999999998 78 899999 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 228 HHDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+++|.+++.+..++ +++|++++|.+. ++++.||+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~---~~~~~ygv~~~ 121 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTK---CIMKSYGVLKE 121 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTC---HHHHHHTCEET
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCch---HHHHHcCCccC
Confidence 99999887554444 568999999654 46888998743
No 42
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.85 E-value=1.2e-21 Score=159.11 Aligned_cols=104 Identities=23% Similarity=0.286 Sum_probs=95.3
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCC-eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAF-WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk-~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
+.+|+.+|+|+|++.+|+.++++ +++|| ++||+||+++|||+|..+++.|++++++|++++++|++||+|+++.+++|
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~-~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~ 87 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLR-GYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIW 87 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGG-GGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHH-HhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHH
Confidence 67999999999999999999999 89998 99999999999999999999999999999888999999999999999999
Q ss_pred HHHHHhcccCCeeEEEeeCC--cchhhhhhhhccccc
Q psy1172 232 IKALVRDCILGLLINLSVDD--FKEVEGRSRRFQESL 266 (276)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~D~--~~~~~~~a~~ygv~~ 266 (276)
.+++ +++|++++|. +. .+++.||+..
T Consensus 88 ~~~~------~~~~~~~~d~~~~~---~~~~~~~v~~ 115 (160)
T 1xvw_A 88 ATQS------GFTFPLLSDFWPHG---AVSQAYGVFN 115 (160)
T ss_dssp HHHH------TCCSCEEECTTTTT---HHHHHTTCEE
T ss_pred HHhc------CCCceEEecCCcCh---HHHHHcCCcc
Confidence 9998 7789999884 33 4678898873
No 43
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.85 E-value=9.5e-22 Score=166.20 Aligned_cols=112 Identities=24% Similarity=0.285 Sum_probs=98.3
Q ss_pred cccccCCCCCcEEecC-CC--CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 152 DRFAAALLPGCSLLGC-QA--SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~-~G--~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
.+.+|+++|+|+|++. +| +.++|+ +++||++||+|||++|||+|..+++.|++++++|+++|++||+||+|+.+.+
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~-~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLS-DYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGG-GGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHH-HHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3568999999999998 88 899999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
++|.+++.+..++ +++|++++|.+. ++++.||+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~---~~~~~~gv~~~ 119 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTR---RLSEDYGVLKT 119 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTC---HHHHHTTCEET
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcH---HHHHHcCCccC
Confidence 9998887554433 568999998654 46888998743
No 44
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.85 E-value=1.6e-21 Score=163.99 Aligned_cols=109 Identities=21% Similarity=0.290 Sum_probs=96.2
Q ss_pred cccCCCCCcEEecC--CC--CeEEecccC-CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 154 FAAALLPGCSLLGC--QA--SLVILECSI-PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 154 ~~G~~aPdF~L~~~--~G--~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
++|+++|+|+|++. +| +.++|+ ++ +||++||+|||++|||+|..+++.|++++++|+++|++||+||+|+++.+
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~ 79 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLS-DFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTH 79 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGG-GGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHH-HHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHH
Confidence 37999999999999 99 899999 77 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhccccc
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
++|.+.+.++.++ +++|++++|.+. .++++||+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~D~~~---~~~~~~gv~~ 115 (192)
T 2h01_A 80 LAWKKTPLSQGGIGNIKHTLISDISK---SIARSYDVLF 115 (192)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTS---HHHHHTTCEE
T ss_pred HHHHHhHHhhCCccCCCcCeEECCcH---HHHHHhCCcC
Confidence 9998877544333 468999999654 4688899873
No 45
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.85 E-value=3.6e-21 Score=166.05 Aligned_cols=112 Identities=29% Similarity=0.327 Sum_probs=97.4
Q ss_pred cccccCCCCCcEEec---CCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH
Q psy1172 152 DRFAAALLPGCSLLG---CQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~---~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~ 228 (276)
.+.+|+++|+|+|++ .+|+.++|+ +++||++||+|||++|||+|..+++.|++++++|+++|++||+||+|+.+.+
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~-d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLD-DFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGG-GGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHH-HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 457899999999985 467899999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 229 HDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
++|.+.+.+..++ +++|++++|.+. +++++||+..+
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~---~i~~~ygv~~~ 141 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTK---QISRDYGVLLE 141 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTS---HHHHHTTCEET
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcH---HHHHHhCCeec
Confidence 9999887555443 568999999654 46888998743
No 46
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.84 E-value=2.4e-21 Score=154.74 Aligned_cols=110 Identities=7% Similarity=0.041 Sum_probs=91.1
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHD 230 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~ 230 (276)
.+.+|+.+|+|++ +.+|+.++|+ +++||++||+|| ++||++|..++|.|++++++|++++++||+||+| +.+..++
T Consensus 6 ~l~~G~~~P~f~l-~~~g~~~~l~-~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~ 82 (143)
T 4fo5_A 6 GVNPGDLAPRIEF-LGNDAKASFH-NQLGRYTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTE 82 (143)
T ss_dssp SSSTTSBCCCCCC------CCCSC-CSSCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHH
T ss_pred ccCCcccCCceEE-cCCCCEEEHH-HhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHH
Confidence 4579999999999 8999999999 899999999999 9999999999999999999999899999999999 5567777
Q ss_pred HHHHHHhcccCCeeE-EEeeCCcchhhhhhhhcccccccCC
Q psy1172 231 WIKALVRDCILGLLI-NLSVDDFKEVEGRSRRFQESLNTYG 270 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~-~~l~D~~~~~~~~a~~ygv~~~~~~ 270 (276)
+.+++ +++| ++++|..+....+++.||+..-++-
T Consensus 83 ~~~~~------~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 117 (143)
T 4fo5_A 83 TVKID------KLDLSTQFHEGLGKESELYKKYDLRKGFKN 117 (143)
T ss_dssp HHHHH------TCCGGGEEECTTGGGSHHHHHTTGGGCCCE
T ss_pred HHHHh------CCCCceeeecccccchHHHHHcCCCCCCcE
Confidence 77777 7788 7888876655667899998755543
No 47
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.84 E-value=7.5e-21 Score=159.11 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=94.3
Q ss_pred cccCCCCCcEEecCCCC----eEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHH
Q psy1172 154 FAAALLPGCSLLGCQAS----LVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHH 229 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~G~----~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~ 229 (276)
.+|+.+|+|+|++.+|+ .++|+ +++||++||+|||++|||+|..+++.|++++++|++++++|++||+|+++.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~-~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEA-DLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETT-TTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHH-HHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 57999999999999999 99999 89999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccc
Q psy1172 230 DWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
+|.+++.... +++|++++|.+. .+++.||+..
T Consensus 81 ~~~~~~~~~~--~~~~~~~~d~~~---~~~~~~~v~~ 112 (187)
T 1we0_A 81 AWHENSPAVG--SIEYIMIGDPSQ---TISRQFDVLN 112 (187)
T ss_dssp HHHHSCHHHH--TCCSEEEECTTC---HHHHHTTCEE
T ss_pred HHHHHhcccc--CCCceEEECCch---HHHHHhCCCc
Confidence 8887763211 458999998654 4688899874
No 48
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.84 E-value=5.2e-21 Score=165.17 Aligned_cols=114 Identities=26% Similarity=0.313 Sum_probs=97.2
Q ss_pred ccccccCCCCCcEEecC---CCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHH
Q psy1172 151 IDRFAAALLPGCSLLGC---QASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVES 227 (276)
Q Consensus 151 ~~~~~G~~aPdF~L~~~---~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~ 227 (276)
..+.+|+++|+|+|++. +|+.++|+ +++||++||+||+++||++|..++|.|++++++|+++|++||+||+|+++.
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~-~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLK-DYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGG-GGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHH-HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 35679999999999965 45899999 899999999999779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccC-CeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 228 HHDWIKALVRDCIL-GLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.++|.+.+.+..+. +++|++++|.+. .+++.||+....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~---~~~~~ygv~~~~ 155 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQ---EISKAYGVFDEE 155 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSS---HHHHHTTCBCTT
T ss_pred HHHHHHHhhhhccccccceeEEeCCch---HHHHHcCCeecC
Confidence 99999887544322 568999999764 468889987543
No 49
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.83 E-value=2.4e-21 Score=171.05 Aligned_cols=103 Identities=27% Similarity=0.439 Sum_probs=72.8
Q ss_pred chhhHHHhcCCCCCCCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHH
Q psy1172 2 FLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEI 81 (276)
Q Consensus 2 w~~~i~~~~~~~~~~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~ei 81 (276)
|++.+++..| ..+++||+++|++++++++||++.+.. |. +.|++||||++|+|++++.++...+|+++|+
T Consensus 142 ~~~~~~~~~g----~~~~~fp~l~D~~~~va~~ygv~~~~~----g~--~~p~tflID~~G~I~~~~~~~~~~~~~~~ei 211 (254)
T 3tjj_A 142 WINTPRRQGG----LGPIRIPLLSDLTHQISKDYGVYLEDS----GH--TLRGLFIIDDKGILRQITLNDLPVGRSVDET 211 (254)
T ss_dssp HHTSCGGGTS----CCSCSSCEEECTTSHHHHHHTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred HHHHHHHhcC----CcccccceeeCcHHHHHHHcCCccccC----CC--ccceEEEECCCCeEEEEEecCCCCCCCHHHH
Confidence 5555555544 247999999999999999999986543 43 5799999999999999999999999999999
Q ss_pred HHHHHhhcccccCCCCcCCCCCCCCceeeCCCC
Q psy1172 82 LRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGL 114 (276)
Q Consensus 82 lr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~~ 114 (276)
++.|++||.+++++++||+||+||+++|++++.
T Consensus 212 l~~L~alq~~~~~~~~cp~~W~~g~~~~~~~~~ 244 (254)
T 3tjj_A 212 LRLVQAFQYTDKHGEVAPAGWKPGSETIIPDPA 244 (254)
T ss_dssp HHHHHHHHHHHHHC-------------------
T ss_pred HHHHHhhccccccCccccCCCCCCCceeccChh
Confidence 999999999999999999999999999988753
No 50
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.83 E-value=5.2e-21 Score=161.61 Aligned_cols=108 Identities=26% Similarity=0.296 Sum_probs=94.4
Q ss_pred cccCCCCCcEEecC--CCC---eEEecccC-CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHH
Q psy1172 154 FAAALLPGCSLLGC--QAS---LVILECSI-PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVES 227 (276)
Q Consensus 154 ~~G~~aPdF~L~~~--~G~---~v~l~~~~-~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~ 227 (276)
.+|+++|+|+|++. +|+ .++|+ ++ +||++||+|||++|||+|+.+++.|++++++|+++|++||+||+|+++.
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 80 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELS-KNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQV 80 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETT-TSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHH-HHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHH
Confidence 57999999999999 898 99999 78 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccc-CCeeEEEeeCCcchhhhhhhhcccc
Q psy1172 228 HHDWIKALVRDCI-LGLLINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 228 ~~~~~~~~~~~~~-~~~~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
+++|.+++.++.+ .+++|++++|.+. .+++.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~v~ 116 (198)
T 1zof_A 81 HFAWKNTPVEKGGIGQVSFPMVADITK---SISRDYDVL 116 (198)
T ss_dssp HHHHHTSCGGGTCCCCCSSCEEECTTS---HHHHHTTCE
T ss_pred HHHHHHhhhhcccccCceeEEEECCch---HHHHHhCCc
Confidence 9999888432211 1678999998654 467889987
No 51
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.82 E-value=2.2e-20 Score=148.40 Aligned_cols=107 Identities=10% Similarity=0.052 Sum_probs=91.3
Q ss_pred cccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHH---HHHHHHhCCcEEEEEeCC-ChHHHH
Q psy1172 154 FAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQ---LIKEFEQRTCKVIALSCD-SVESHH 229 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~---~~~~~~~~gv~Vv~VS~D-~~~~~~ 229 (276)
++|+++|+|++++.+|+.++++ +++||++||+|| ++|||+|..++|.|.+ ++++|+++++.|++||+| +.+..+
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~-~~~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMS-RLKAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGG-GCCCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhh-hcCCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 5799999999999999999999 899999999999 9999999999999998 999999999999999998 556666
Q ss_pred HHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccccC
Q psy1172 230 DWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNTY 269 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~ 269 (276)
+|.+++ +++|+++.|.++... .++.||+..-++
T Consensus 80 ~~~~~~------~~~~~~~~d~~~~~~-~~~~~~v~~~P~ 112 (142)
T 3ewl_A 80 TKAVYM------PQGWIVGWNKAGDIR-TRQLYDIRATPT 112 (142)
T ss_dssp HHHTTS------CTTCEEEECTTCHHH-HTTCSCCCSSSE
T ss_pred HHHHHc------CCCcceeeCCccchh-hHHHcCCCCCCe
Confidence 666665 778999999776531 245888764443
No 52
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.82 E-value=2.3e-20 Score=157.41 Aligned_cols=108 Identities=25% Similarity=0.325 Sum_probs=94.4
Q ss_pred cccccCCCCCcEEecCC-------------C--CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcE
Q psy1172 152 DRFAAALLPGCSLLGCQ-------------A--SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCK 216 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~-------------G--~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~ 216 (276)
.+.+|+.+|+|+|++.+ | +.++|+ +++||++||+|||++|||+|..+++.|++++++|++++++
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~-~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~ 81 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSD-EHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQ 81 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETT-SSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHH-HhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCE
Confidence 35789999999999998 6 799999 8999999999999999999999999999999999999999
Q ss_pred EEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccc
Q psy1172 217 VIALSCDSVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 217 Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
||+||+|+++.+++|.+++.... +++|++++|.+. .+++.||+.
T Consensus 82 vv~Vs~d~~~~~~~~~~~~~~~~--~~~~~~~~d~~~---~~~~~~~v~ 125 (195)
T 2bmx_A 82 ILGVSIDSEFAHFQWRAQHNDLK--TLPFPMLSDIKR---ELSQAAGVL 125 (195)
T ss_dssp EEEEESSCHHHHHHHHHHCTTGG--GCCSCEEECTTS---HHHHHHTCB
T ss_pred EEEEECCCHHHHHHHHHHhcccc--CCceeEEeCCch---HHHHHhCCc
Confidence 99999999999999988762211 457899988654 467889987
No 53
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.82 E-value=1.6e-20 Score=164.32 Aligned_cols=107 Identities=24% Similarity=0.395 Sum_probs=91.8
Q ss_pred chhhHHHhcCCCCCCCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHH
Q psy1172 2 FLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEI 81 (276)
Q Consensus 2 w~~~i~~~~~~~~~~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~ei 81 (276)
|++.+++..| ..+++||+++|++++++++||+..+.. |+ +.|++||||++|+|++++.++...+++++|+
T Consensus 128 ~~~~~~~~~~----~~~~~fp~l~D~~~~v~~~ygv~~~~~----g~--~~p~~flID~~G~I~~~~~~~~~~~~~~~ei 197 (240)
T 3qpm_A 128 WIITPRKQGG----LGPMKIPLLSDLTHQISKDYGVYLEDQ----GH--TLRGLFIIDEKGVLRQITMNDLPVGRSVDET 197 (240)
T ss_dssp HHHSCGGGTC----CCSCSSCEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred HHHHHHhhcC----CCCCceeEEeCchHHHHHHhCCccccC----CC--ccceEEEEcCCCeEEEEEecCCCCCCCHHHH
Confidence 5555554444 247999999999999999999986543 43 5699999999999999999999999999999
Q ss_pred HHHHHhhcccccCCCCcCCCCCCCCceeeCCCCCchh
Q psy1172 82 LRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKD 118 (276)
Q Consensus 82 lr~l~~lq~~~~~~~~~p~~w~~g~~~~~~p~~~~~~ 118 (276)
++.|++||.+++++++||+||+||+++|++++.-.++
T Consensus 198 l~~l~~lq~~~~~~~~cp~~W~~g~~~~~~~~~~~~~ 234 (240)
T 3qpm_A 198 LRLVQAFQYTDKHGEVCPAGWKPGSDTIIPDPSGKLK 234 (240)
T ss_dssp HHHHHHHHHHHHHSCBBCTTCCTTSCCBCSSTTTTHH
T ss_pred HHHHHHhhhhhhcCCccCCCCCCCCceecCCHHHHHH
Confidence 9999999999999999999999999999887654443
No 54
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=9.9e-20 Score=146.42 Aligned_cols=111 Identities=10% Similarity=-0.004 Sum_probs=95.6
Q ss_pred cccccCCCCCcEEecCCCCeEEec-ccCCCCeEEEEEEcCCCCcc--cHHHHHHHHHHHHHH-HhCCcEEEEEeCCC-hH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILE-CSIPAFWGILFSHPSDFTPV--CTTELARVLQLIKEF-EQRTCKVIALSCDS-VE 226 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~-~~~~gk~vvL~f~pa~~cp~--C~~el~~l~~~~~~~-~~~gv~Vv~VS~D~-~~ 226 (276)
.+.+|+++|+|+|++.+|+.++|+ ++++||++||+|| ++|||+ |+.++|.|++++++| +++|++|++||+|+ ++
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~ 82 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQ 82 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHH
Confidence 457899999999999999999987 2579999999999 899999 999999999999999 88999999999985 46
Q ss_pred HHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccccC
Q psy1172 227 SHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNTY 269 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~ 269 (276)
..++|.+++ +++|+++.|.......+++.||+..-++
T Consensus 83 ~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~v~~~P~ 119 (150)
T 3fw2_A 83 QWKDAIKRD------TLDWEQVCDFGGLNSEVAKQYSIYKIPA 119 (150)
T ss_dssp HHHHHHHHT------TCCSEEECCSCGGGCHHHHHTTCCSSSE
T ss_pred HHHHHHHHh------CCCceEEEcCcccchHHHHHcCCCccCe
Confidence 777777777 7899999997655556788999864443
No 55
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.81 E-value=1.2e-19 Score=146.21 Aligned_cols=108 Identities=12% Similarity=0.070 Sum_probs=93.8
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHDW 231 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~ 231 (276)
+.+|+.+|+|++++.+|+.++++ +++||++||+|| ++|||+|+.+++.|++++++|.+++++|++|+.|. .+..+++
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLN-DFKGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESG-GGTTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHH-HcCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 46899999999999999999999 899999999999 99999999999999999999999999999999984 5667777
Q ss_pred HHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.+++ +++|+++.|.......+++.||+..-+
T Consensus 81 ~~~~------~~~~~~~~d~~~~~~~~~~~~~v~~~P 111 (152)
T 2lrn_A 81 IEED------KSYWNQVLLQKDDVKDVLESYCIVGFP 111 (152)
T ss_dssp HHHH------TCCSEEEEECHHHHHHHHHHTTCCSSC
T ss_pred HHHh------CCCCeEEecccchhHHHHHHhCCCcCC
Confidence 7777 778999998743345678889986433
No 56
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.81 E-value=3.8e-20 Score=159.15 Aligned_cols=106 Identities=11% Similarity=0.084 Sum_probs=94.6
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCe-EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC--------
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFW-GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC-------- 222 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~-vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~-------- 222 (276)
.+.+|+++|+|+|++.+|+.++|+ +++||+ +||+|| ++|||+|+.+++.|++++++|+++|++||+||+
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~-~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~ 108 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLA-EFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPE 108 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGG-GGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHH-HhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 457999999999999999999999 899996 999999 899999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 223 DSVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 223 D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|+++.+++|.+++ +++|++++|.+. .+++.||+..-+
T Consensus 109 d~~~~~~~~~~~~------~~~~~~l~D~~~---~~~~~~~v~~~P 145 (218)
T 3u5r_E 109 ETLERVGAEVKAY------GYGFPYLKDASQ---SVAKAYGAACTP 145 (218)
T ss_dssp GSHHHHHHHHHHH------TCCSCEEECTTC---HHHHHHTCCEES
T ss_pred CCHHHHHHHHHHh------CCCccEEECCcc---HHHHHcCCCCCC
Confidence 6778888888888 789999999655 467888886443
No 57
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.80 E-value=8.5e-20 Score=145.50 Aligned_cols=109 Identities=11% Similarity=-0.005 Sum_probs=89.0
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHH---HHHHHHhCCcEEEEEeCCChHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQ---LIKEFEQRTCKVIALSCDSVESHH 229 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~---~~~~~~~~gv~Vv~VS~D~~~~~~ 229 (276)
..+|++||+|++++.+|+.++|+ +++||++||+|| ++||++|+.++|.|++ ++++|++++++|++||+|+.. .
T Consensus 5 ~~~G~~ap~f~l~~~~g~~~~l~-~~~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~--~ 80 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLY-QFPAEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEEL--D 80 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETT-TCCCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCH--H
T ss_pred hcCCCccCCcEEEcCCCCEeeHH-HcCCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCH--H
Confidence 36899999999999999999999 899999999999 9999999999999999 999999999999999998642 2
Q ss_pred HHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccccC
Q psy1172 230 DWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNTY 269 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~ 269 (276)
.|.+...+. ++.++.+.|.+.. ...++.|++..-++
T Consensus 81 ~~~~~~~~~---~~~~~~~~d~~~~-~~~~~~~~v~~~P~ 116 (142)
T 3eur_A 81 EWKKHRNDF---AKEWTNGYDKELV-IKNKNLYDLRAIPT 116 (142)
T ss_dssp HHHHHGGGS---CTTSEEEECTTCH-HHHTTCSCCTTCSE
T ss_pred HHHHHHHhc---ccccccccCccch-hhhhhhcCCCcCCe
Confidence 344444333 6678888886543 23477888864443
No 58
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.80 E-value=1.3e-19 Score=150.29 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=87.2
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~ 231 (276)
.+.+|+.+|+|+|++.+|+.++++ +++||++||+||++.|||+|+.++|.|++++++ .+++||+||+|+++.+++|
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~-~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~~ 92 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSD-QFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKRF 92 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGG-GGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTTC
T ss_pred CCCcCCcCCCeEEECCCCCEEeHH-HcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHHH
Confidence 456899999999999999999999 899999999999444499999999999999988 7899999999999988889
Q ss_pred HHHHHhcccCCe-eEEEeeCCcchhhhhhhhcccccc
Q psy1172 232 IKALVRDCILGL-LINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
.+++ ++ +|++++|.+. .+++.||+...
T Consensus 93 ~~~~------~~~~~~~l~D~~~---~~~~~~gv~~~ 120 (175)
T 1xvq_A 93 CGAE------GTENVMPASAFRD---SFGEDYGVTIA 120 (175)
T ss_dssp C------------CEEEEECTTS---SHHHHTTCBBC
T ss_pred HHHc------CCCCceEeeCCHH---HHHHHhCCccc
Confidence 8888 77 7999999764 46888998754
No 59
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.80 E-value=2.8e-19 Score=149.52 Aligned_cols=92 Identities=12% Similarity=0.183 Sum_probs=83.2
Q ss_pred ccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy1172 151 IDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD------- 223 (276)
Q Consensus 151 ~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D------- 223 (276)
.++.+|+.+|+|+|++.+|+.++|+ +++||++||+|| ++|||+|+.++|.|++++++|+++|++||+||.|
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~-~~~Gk~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~ 98 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLD-KYRGFVCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 98 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCC
T ss_pred hhccCCCCcCCceeEcCCCCEeeHH-HcCCCEEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCC
Confidence 4567899999999999999999999 899999999999 9999999999999999999999999999999986
Q ss_pred -ChHHHHHHHHHHHhcccCCeeEEEeeC
Q psy1172 224 -SVESHHDWIKALVRDCILGLLINLSVD 250 (276)
Q Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~l~D 250 (276)
+++.+++|.+++ +++|+++.|
T Consensus 99 ~~~~~~~~~~~~~------~~~~p~~~~ 120 (185)
T 2gs3_A 99 GSNEEIKEFAAGY------NVKFDMFSK 120 (185)
T ss_dssp SCHHHHHHHHHHT------TCCSEEBCC
T ss_pred CCHHHHHHHHHHc------CCCCeeeee
Confidence 356777888777 778999874
No 60
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.80 E-value=4.3e-20 Score=151.33 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=91.2
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCC-CcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDF-TPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHD 230 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~-cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~ 230 (276)
.+.+|+++|+|+|++.+|+.++|+ +++||++||+|| ++| ||+|+.+++.|++++++| .+++||+||.|+++.+++
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~-~~~gk~~vl~F~-~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLA-DMKGKVTIISVI-PSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHH-HHTTSCEEEEEC-SCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred ccCCCCcCCceEEECCCCCEeeHH-HhCCCeEEEEEe-cCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 357899999999999999999999 899999999999 666 999999999999999999 889999999999888888
Q ss_pred HHHHHHhcccCCe-eEEEeeC-Ccchhhhhhhhcccccc
Q psy1172 231 WIKALVRDCILGL-LINLSVD-DFKEVEGRSRRFQESLN 267 (276)
Q Consensus 231 ~~~~~~~~~~~~~-~~~~l~D-~~~~~~~~a~~ygv~~~ 267 (276)
|.+++ ++ +|++++| .++ ++++.||+...
T Consensus 93 ~~~~~------~~~~~~~~~d~~~~---~~~~~~~v~~~ 122 (167)
T 2jsy_A 93 WCGAN------GIDKVETLSDHRDM---SFGEAFGVYIK 122 (167)
T ss_dssp CGGGS------SCTTEEEEEGGGTC---HHHHHTTCBBT
T ss_pred HHHhc------CCCCceEeeCCchh---HHHHHhCCccc
Confidence 88777 77 8999988 443 46788998764
No 61
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.79 E-value=5.2e-19 Score=146.96 Aligned_cols=101 Identities=14% Similarity=0.135 Sum_probs=89.9
Q ss_pred cccccCCCCCcEEecC--CCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCc------EEEEEeCC
Q psy1172 152 DRFAAALLPGCSLLGC--QASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTC------KVIALSCD 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~--~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv------~Vv~VS~D 223 (276)
.+..|+++|+|+|++. +|+.++|+ +++||++||+|| ++|||+|+.+++.|++++++|+++|+ +|++|+.|
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~-~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLS-DFENQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred ccccCCCCCceeccccccCCcEecHH-HhCCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 4678999999999999 99999999 899999999999 99999999999999999999999999 99999998
Q ss_pred C--hHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcc
Q psy1172 224 S--VESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQ 263 (276)
Q Consensus 224 ~--~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~yg 263 (276)
+ ++..++|.+++ +++|+++.|.++.. .+.||
T Consensus 108 ~~~~~~~~~~~~~~------~~~~~~~~d~~~~~---~~~~~ 140 (183)
T 3lwa_A 108 DYSRDIAQDFVTDN------GLDYPSIYDPPFMT---AASLG 140 (183)
T ss_dssp CCCHHHHHHHHHHT------TCCSCEEECTTCGG---GGGTT
T ss_pred CCCHHHHHHHHHHc------CCCccEEECCcchH---HHHhc
Confidence 7 78888888888 78899999977654 44454
No 62
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.79 E-value=2e-19 Score=149.87 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=79.5
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-------- 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-------- 223 (276)
.+++|+++|+|+|++.+|+.++++ +++||++||+|| ++|||+|+.++|.|++++++|+++|++|++||+|
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~~~l~-~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 99 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNIRGKLVSLE-KYRGSVSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 99 (181)
T ss_dssp -----CCGGGCEEEBTTSCEEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cCCcCCccCceEeecCCCCEecHH-HcCCCEEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCC
Confidence 557999999999999999999999 899999999999 9999999999999999999999999999999986
Q ss_pred ChHHHHHHHHH-HHhcccCCeeEEEeeC
Q psy1172 224 SVESHHDWIKA-LVRDCILGLLINLSVD 250 (276)
Q Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~~~l~D 250 (276)
+++.+++|.++ + +++||+++|
T Consensus 100 ~~~~~~~~~~~~~------~~~~p~~~~ 121 (181)
T 2p31_A 100 SNKEIESFARRTY------SVSFPMFSK 121 (181)
T ss_dssp CHHHHHHHHHHHH------CCCSCBBCC
T ss_pred CHHHHHHHHHhhc------CCCceeEee
Confidence 56778888887 7 778898864
No 63
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.79 E-value=2.2e-19 Score=145.43 Aligned_cols=106 Identities=9% Similarity=0.018 Sum_probs=89.4
Q ss_pred cccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHH
Q psy1172 154 FAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIK 233 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~ 233 (276)
..|+.+|+|+|++.+|+.++|+ +++||++||+|| ++|||+|+.+++.|++++++|+++|++|++||.|+... .+.+
T Consensus 10 ~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~--~~~~ 85 (152)
T 2lrt_A 10 IKEASIIDIQLKDLKGNTRSLT-DLKGKVVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEH--FWKT 85 (152)
T ss_dssp SCTTCSCCCCEEBTTSCEECTT-TGGGSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHH--HHHH
T ss_pred ccCCCCCCeEEEcCCCCEEeHH-HhCCCEEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHH--HHHH
Confidence 4789999999999999999999 799999999999 89999999999999999999999999999999997542 2333
Q ss_pred HHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 234 ALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 234 ~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.. + +++|+++.|.++....+++.||+..-+
T Consensus 86 ~~-~----~~~~~~~~d~~~~~~~~~~~~~v~~~P 115 (152)
T 2lrt_A 86 SA-D----NLPWVCVRDANGAYSSYISLYNVTNLP 115 (152)
T ss_dssp HH-T----TCSSEEEECSSGGGCHHHHHHTCCSCS
T ss_pred HH-h----CCCceEEECCCCcchHHHHHcCcccCc
Confidence 32 1 358999999877655578889986443
No 64
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.79 E-value=2.5e-19 Score=146.60 Aligned_cols=106 Identities=20% Similarity=0.150 Sum_probs=93.4
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcc-cHHHHHHHHHHHHHHHhC---CcEEEEEeCC----
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPV-CTTELARVLQLIKEFEQR---TCKVIALSCD---- 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~-C~~el~~l~~~~~~~~~~---gv~Vv~VS~D---- 223 (276)
.+.+|+.+|+|+|++.+| .++++ +++||++||+|| ++|||+ |+.+++.|++++++|+++ +++||+||+|
T Consensus 9 ~~~~G~~~p~f~l~~~~g-~~~l~-~~~gk~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d 85 (172)
T 2k6v_A 9 TRLLNPKPVDFALEGPQG-PVRLS-QFQDKVVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERD 85 (172)
T ss_dssp EEEEEEEECCCEEECSSS-EEEGG-GSTTSEEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTC
T ss_pred ccccCCCCCCeEEEcCCC-CCcHH-HhCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCC
Confidence 345799999999999999 99999 899999999999 999997 999999999999999875 7999999976
Q ss_pred ChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccc
Q psy1172 224 SVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
+++.+++|.+++ +++|++++|.+.....+++.||+..
T Consensus 86 ~~~~~~~~~~~~------~~~~~~l~d~~~~~~~~~~~~gv~~ 122 (172)
T 2k6v_A 86 PPEVADRYAKAF------HPSFLGLSGSPEAVREAAQTFGVFY 122 (172)
T ss_dssp CHHHHHHHHHHH------CTTEEEECCCHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHh------CCCcEEEeCCHHHHHHHHHhcCeEE
Confidence 467888888888 7789999998765567788898764
No 65
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.79 E-value=4.4e-19 Score=147.78 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=85.5
Q ss_pred cccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC------
Q psy1172 150 LIDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD------ 223 (276)
Q Consensus 150 ~~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D------ 223 (276)
...+.+|+.+|+|+|++.+|+.++|+ +++||++||+|| ++|||+|..+++.|++++++|+++|++|++||+|
T Consensus 18 ~~~~~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e 95 (183)
T 2obi_A 18 RDDWRCARSMHEFSAKDIDGHMVNLD-KYRGFVCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 95 (183)
T ss_dssp -CCGGGCCSGGGCEEEBTTSCEEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred ccCCcccCcccceEEEcCCCCEeeHH-HcCCCEEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCC
Confidence 34668999999999999999999999 899999999999 9999999999999999999999999999999986
Q ss_pred --ChHHHHHHHHHHHhcccCCeeEEEee--CCcch
Q psy1172 224 --SVESHHDWIKALVRDCILGLLINLSV--DDFKE 254 (276)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~~l~--D~~~~ 254 (276)
+++.+++|.+++ +++|+++. |.++.
T Consensus 96 ~~~~~~~~~~~~~~------~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 96 PGSNEEIKEFAAGY------NVKFDMFSKICVNGD 124 (183)
T ss_dssp CSCHHHHHHHHHTT------TCCSEEBCCCCCSST
T ss_pred CCCHHHHHHHHHHc------CCCceEEeeeccCCc
Confidence 467777787776 77899987 55443
No 66
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.79 E-value=5.9e-19 Score=143.96 Aligned_cols=95 Identities=6% Similarity=0.085 Sum_probs=82.5
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-------- 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-------- 223 (276)
.+++|+.+|+|+|++.+|+.++++ +++||++||+|| ++|||+|..+++.|++++++|+++|++||+||.|
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 81 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLE-KYRGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPW 81 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cccCCcccccceeecCCCCCccHH-HcCCCEEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCC
Confidence 356899999999999999999999 899999999999 8999999999999999999999999999999986
Q ss_pred ChHHHHHH-HHHHHhcccCCeeEEEee--CCcch
Q psy1172 224 SVESHHDW-IKALVRDCILGLLINLSV--DDFKE 254 (276)
Q Consensus 224 ~~~~~~~~-~~~~~~~~~~~~~~~~l~--D~~~~ 254 (276)
+++.+++| .+++ +++||++. |.++.
T Consensus 82 ~~~~~~~~~~~~~------~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 82 AEAEIKKFVTEKY------GVQFDMFSKIKVNGS 109 (169)
T ss_dssp CHHHHHHHHHHHH------CCCSEEBCCCCCSST
T ss_pred CHHHHHHHHHHhc------CCCCceEEEEeecCc
Confidence 35677888 4777 77899986 55443
No 67
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.78 E-value=3.7e-19 Score=153.25 Aligned_cols=90 Identities=8% Similarity=0.060 Sum_probs=80.1
Q ss_pred cccCCCCCcEEecCC-CCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------C
Q psy1172 154 FAAALLPGCSLLGCQ-ASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------S 224 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~-G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------~ 224 (276)
..+..+|+|+|++.+ |+.++|+ +|+||+|||+|| ++|||+|+ |+|.|++++++|+++|++||+||.| +
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Ls-d~~GKvvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~ 106 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFK-QYVGKHILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGD 106 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGG-GGTTSEEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cccCCcCCcEeeeCCCCCEEcHH-HhCCCEEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCC
Confidence 456789999999999 9999999 899999999999 99999999 9999999999999999999999964 4
Q ss_pred hHHHHHHHH------HHHhcccCCeeEEEeeCCc
Q psy1172 225 VESHHDWIK------ALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 225 ~~~~~~~~~------~~~~~~~~~~~~~~l~D~~ 252 (276)
.+.+++|++ ++ +++||+++|.+
T Consensus 107 ~~~i~~f~~~~~~~~~~------~~~fpll~d~d 134 (215)
T 2i3y_A 107 NKEILPGLKYVRPGGGF------VPSFQLFEKGD 134 (215)
T ss_dssp HHHHHHHHHHTSSCTTC------CCSSEEBCCCC
T ss_pred HHHHHHHHHhccchhcc------CccceeEeeec
Confidence 567788887 55 77899998654
No 68
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.78 E-value=6.3e-19 Score=146.59 Aligned_cols=89 Identities=12% Similarity=0.170 Sum_probs=81.2
Q ss_pred cccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------Ch
Q psy1172 154 FAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------SV 225 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------~~ 225 (276)
..|+.+|+|+|++.+|+.++++ +++||++||+|| ++|||+|..++|.|++++++|+++|++||+||+| ++
T Consensus 13 ~~~~~~p~f~l~d~~G~~v~l~-~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~ 90 (180)
T 3kij_A 13 PKINSFYAFEVKDAKGRTVSLE-KYKGKVSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 90 (180)
T ss_dssp CCCCCGGGCEEEBTTSCEEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCH
T ss_pred CCcCcccceEEecCCCCEecHH-HcCCCEEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCH
Confidence 4789999999999999999999 899999999999 9999999999999999999999999999999965 67
Q ss_pred HHHHHHHHH-HHhcccCCeeEEEeeC
Q psy1172 226 ESHHDWIKA-LVRDCILGLLINLSVD 250 (276)
Q Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~l~D 250 (276)
+.+++|.++ + ++.|+++.+
T Consensus 91 ~~~~~~~~~~~------~~~~~~~~~ 110 (180)
T 3kij_A 91 KEVESFARKNY------GVTFPIFHK 110 (180)
T ss_dssp HHHHHHHHHHH------CCCSCBBCC
T ss_pred HHHHHHHHHhc------CCCCceeee
Confidence 788888888 7 778888753
No 69
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.78 E-value=5.2e-19 Score=145.14 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=84.5
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCc-ccHHHHHHHHHHHHHHHhCC--cEEEEEeCC----C
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTP-VCTTELARVLQLIKEFEQRT--CKVIALSCD----S 224 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp-~C~~el~~l~~~~~~~~~~g--v~Vv~VS~D----~ 224 (276)
.+.+|+.+|+|+|++.+|+.++|+ +++||++||+|| ++||| +|..+++.|++++++|+++| ++||+||+| +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLE-SLKGEVWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETG-GGTTCCEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehh-hcCCCEEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 456899999999999999999999 799999999999 99999 99999999999999999887 999999997 5
Q ss_pred hHHHHHHHHHHHhcccCCeeE---EEeeCCcch
Q psy1172 225 VESHHDWIKALVRDCILGLLI---NLSVDDFKE 254 (276)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~---~~l~D~~~~ 254 (276)
++.+++|.+++ +++| +++.|.+..
T Consensus 84 ~~~~~~~~~~~------~~~~~~~~~l~d~~~~ 110 (174)
T 1xzo_A 84 PKQLKKFAANY------PLSFDNWDFLTGYSQS 110 (174)
T ss_dssp HHHHHHHHTTS------CCCGGGEEEEBCSCHH
T ss_pred HHHHHHHHHHc------CCCCcceEEEeCCCHH
Confidence 67777777766 6667 999886654
No 70
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.78 E-value=3.1e-19 Score=152.99 Aligned_cols=95 Identities=28% Similarity=0.428 Sum_probs=85.2
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
+++||+++|++++++++||+..+.. |. +.|++||||++|+|++++.++...+++++|+++.|++|+.+++++++
T Consensus 111 ~~~fp~l~D~~~~~~~~ygv~~~~~----g~--~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~ 184 (211)
T 2pn8_A 111 PIRIPLLSDLTHQISKDYGVYLEDS----GH--TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEV 184 (211)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHCCB
T ss_pred CCceEEEECCchHHHHHcCCcccCC----Cc--ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhcccCCcc
Confidence 6899999999999999999975432 32 46999999999999999998889999999999999999999999999
Q ss_pred cCCCCCCCCceeeCCCCCchh
Q psy1172 98 TPVDWKVGMEIEVRPGLVSKD 118 (276)
Q Consensus 98 ~p~~w~~g~~~~~~p~~~~~~ 118 (276)
||+||++|+++|++|+....+
T Consensus 185 ~p~~w~~g~~~~~~~~~~~~~ 205 (211)
T 2pn8_A 185 CPAGWKPGSETIIPDPAGKLK 205 (211)
T ss_dssp BCTTCCTTSCCBCSSTTTHHH
T ss_pred cCCCCCCCCccccCCchhHHH
Confidence 999999999999998765543
No 71
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.78 E-value=1.4e-18 Score=139.29 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=91.8
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHDW 231 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~ 231 (276)
+.+|+++|+|++++ +|+.++++ +++||++||+|| ++|||+|..+++.|.+++++|.++|+.|++|++| +.+..++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~-~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLS-DKTGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGG-GGTTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHH-HhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 99999999 899999999999 9999999999999999999999999999999998 56677777
Q ss_pred HHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.+++ +++|+++.|.... +++.||+..-+
T Consensus 80 ~~~~------~~~~~~~~d~~~~---~~~~~~v~~~P 107 (152)
T 3gl3_A 80 LAQV------PAEFTVAFDPKGQ---TPRLYGVKGMP 107 (152)
T ss_dssp HHHS------CCCSEEEECTTCH---HHHHTTCCSSS
T ss_pred HHHc------CCCCceeECCcch---hHHHcCCCCCC
Confidence 7777 7789999987654 67788875433
No 72
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.78 E-value=9.8e-19 Score=140.51 Aligned_cols=105 Identities=13% Similarity=0.243 Sum_probs=92.8
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC--hHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS--VESHHD 230 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~--~~~~~~ 230 (276)
+.+|+++|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|++++++|.+.++.|++|++|. ++..++
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~-~~~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLS-DLKGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEE 79 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehh-hcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHH
Confidence 46899999999999999999999 889999999999 99999999999999999999998899999999986 677788
Q ss_pred HHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|.+.+ +++|+++.|.+.. +++.||+..-+
T Consensus 80 ~~~~~------~~~~~~~~d~~~~---~~~~~~v~~~P 108 (154)
T 3kcm_A 80 FFRKT------GFTLPVLLDADKR---VGKLYGTTGVP 108 (154)
T ss_dssp HHHHH------CCCCCEEECTTCH---HHHHHTCCSBC
T ss_pred HHHHc------CCCeeEEecCchH---HHHHhCCCCCC
Confidence 88888 7889999986554 57788876444
No 73
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.77 E-value=3.4e-19 Score=149.64 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=81.9
Q ss_pred CCCCcccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--
Q psy1172 146 VPGGLIDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-- 223 (276)
Q Consensus 146 ~~~~~~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-- 223 (276)
.++..+.++.|+.+|+|+|++.+|+.++|+ +++||++||+|| ++|||+|+.+++.|++++++|+++|++||+||+|
T Consensus 15 ~~~~~s~~~~~~~~p~f~l~~~~G~~~~l~-~~~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~ 92 (190)
T 2vup_A 15 VPRGGSHMSAASSIFDFEVLDADHKPYNLV-QHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQF 92 (190)
T ss_dssp ---------CCCSGGGSCCBBTTSSBCCGG-GGTTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCS
T ss_pred cccccccCCCCCcccCeEEEcCCCCEEEHH-HcCCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCcc
Confidence 455566778999999999999999999999 899999999999 9999999999999999999999999999999998
Q ss_pred ------ChHHHHHHH-HHHHhcccCCeeEEEeeC
Q psy1172 224 ------SVESHHDWI-KALVRDCILGLLINLSVD 250 (276)
Q Consensus 224 ------~~~~~~~~~-~~~~~~~~~~~~~~~l~D 250 (276)
+++.+++|. +++ +++|+++.|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~------~~~~p~l~~ 120 (190)
T 2vup_A 93 GGQEPGNEEEIKEFVCTKF------KAEFPIMAK 120 (190)
T ss_dssp TTCCCSCHHHHHHHHHHHH------CCCSCBBCC
T ss_pred CCCCCCCHHHHHHHHHHhc------CCCeEEEee
Confidence 677888888 777 778998873
No 74
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.77 E-value=2.3e-19 Score=154.67 Aligned_cols=98 Identities=20% Similarity=0.405 Sum_probs=64.2
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
.+++||+++|.+++++++||+..+.. |. ..|++||||++|+|++.+.++...+++.+|++++|++||.++++++
T Consensus 118 ~~~~fp~l~D~~~~i~~~ygv~~~~~----g~--~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~ 191 (220)
T 1zye_A 118 GHMNIALLSDLTKQISRDYGVLLEGP----GL--ALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAHGE 191 (220)
T ss_dssp CSCSSEEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHTTC---
T ss_pred cCCceEEEECCcHHHHHHhCCeecCC----Cc--ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhhcccCC
Confidence 37999999999999999999975543 43 5699999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCceeeCCCCCchhhhccC
Q psy1172 97 ATPVDWKVGMEIEVRPGLVSKDSEGKL 123 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p~~~~~~~~~~~ 123 (276)
.||+||+||+++|++|+ +++++.|
T Consensus 192 ~cp~~W~~g~~~~~~~~---~~~~~~~ 215 (220)
T 1zye_A 192 VSPANWTPESPTIKPHP---TASREYF 215 (220)
T ss_dssp ---------------------------
T ss_pred ccCCCCCCCCceecCCH---HHHHHHH
Confidence 99999999999999876 4454443
No 75
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.77 E-value=8.2e-19 Score=146.36 Aligned_cols=105 Identities=10% Similarity=0.165 Sum_probs=92.9
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC--------C
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC--------D 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~--------D 223 (276)
.+.+|+.+|+|+|++.+|+.++|+ +++||++||+|| ++||++|..+++.|++++++|.++ ++|++|+. |
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLS-QFHEPLLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGG-GCCSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHH-HhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 457899999999999999999999 899999999999 999999999999999999999888 99999999 5
Q ss_pred ChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 224 SVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
+.+.+++|.+++ +++|+++.|.+.. +++.||+..-+
T Consensus 83 ~~~~~~~~~~~~------~~~~~~~~d~~~~---~~~~~~v~~~P 118 (188)
T 2cvb_A 83 APEKMAAFAEEH------GIFFPYLLDETQE---VAKAYRALRTP 118 (188)
T ss_dssp SHHHHHHHHHHH------TCCSCEEECSSSH---HHHHTTCCEES
T ss_pred CHHHHHHHHHHh------CCCceEEECCcch---HHHHcCCCCCC
Confidence 677888888888 7789999986554 57788876443
No 76
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.77 E-value=1e-18 Score=145.35 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=90.9
Q ss_pred cccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh--HH
Q psy1172 150 LIDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV--ES 227 (276)
Q Consensus 150 ~~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~--~~ 227 (276)
...+.+|+.+|+|++++.+|+.++|+ +++||++||+|| ++||++|+.+++.|++++++|++.+++|++||.|.. +.
T Consensus 31 ~~~~~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 108 (186)
T 1jfu_A 31 LTMASAPLKLPDLAFEDADGKPKKLS-DFRGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEK 108 (186)
T ss_dssp CEECCSCCBCCCCEEECTTSCEEEGG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTH
T ss_pred hccccCCCcCCCcEeEcCCCCEeeHH-HcCCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHH
Confidence 34557899999999999999999999 899999999999 999999999999999999999888999999999853 67
Q ss_pred HHHHHHHHHhcccCCe-eEEEeeCCcchhhhhhhhcccc
Q psy1172 228 HHDWIKALVRDCILGL-LINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
.++|.+++ ++ .|+++.|.++. +++.|++.
T Consensus 109 ~~~~~~~~------~~~~~~~~~d~~~~---~~~~~~~~ 138 (186)
T 1jfu_A 109 PKTFLKEA------NLTRLGYFNDQKAK---VFQDLKAI 138 (186)
T ss_dssp HHHHHHHT------TCCTTCCEECTTCH---HHHHHHTT
T ss_pred HHHHHHHc------CCCCCceEECCcch---HHHHhccc
Confidence 78888888 66 48888886543 56677764
No 77
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.77 E-value=6.7e-19 Score=140.00 Aligned_cols=107 Identities=12% Similarity=0.087 Sum_probs=93.5
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHDW 231 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~ 231 (276)
+.+|+++|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|++++++|.++|+.|++|+.| +.+..++|
T Consensus 5 ~~~G~~~p~~~l~~~~g~~~~l~-~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 82 (148)
T 3hcz_A 5 LLLGKKAPNLYMTDTTGTYRYLY-DVQAKYTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKF 82 (148)
T ss_dssp CCTTSBCCCCCCBCTTSCBCCGG-GCCCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHH
T ss_pred cCCCCcCCceEEecCCCCEEEhH-HcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHH
Confidence 56899999999999999999999 889999999999 9999999999999999999999999999999998 56788888
Q ss_pred HHHHHhcccCCee-EEEeeCCcchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGLL-INLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~~-~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.+++ +++ ++++.|.++. ..+++.||+..-+
T Consensus 83 ~~~~------~~~~~~~~~d~~~~-~~~~~~~~i~~~P 113 (148)
T 3hcz_A 83 IRSK------KIGGWLNVRDSKNH-TDFKITYDIYATP 113 (148)
T ss_dssp HHHH------TCTTSEEEECTTCC-CCHHHHHCCCSSC
T ss_pred HHHc------CCCCceEEeccccc-hhHHHhcCcCCCC
Confidence 8888 777 9999887653 1257788875443
No 78
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.77 E-value=2.5e-19 Score=144.78 Aligned_cols=106 Identities=12% Similarity=0.129 Sum_probs=90.9
Q ss_pred ccCCCCCcEEecC--CCCeEEecccCCCCeEEEEEEcCCCCcccHHH-HHHHHHHHHHHHhCCcEEEEEeC-------CC
Q psy1172 155 AAALLPGCSLLGC--QASLVILECSIPAFWGILFSHPSDFTPVCTTE-LARVLQLIKEFEQRTCKVIALSC-------DS 224 (276)
Q Consensus 155 ~G~~aPdF~L~~~--~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~e-l~~l~~~~~~~~~~gv~Vv~VS~-------D~ 224 (276)
.|+++|+|+|++. +|+.++++ +++||++||+|| ++|||+|..+ +|.|++++++|+++++.|++||+ |+
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~-~~~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLA-DLRGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTG-GGTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHH-HhCCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 5889999999994 78999999 899999999999 9999999997 99999999999988999999996 47
Q ss_pred hHHHHHHHHHHHhcccCCeeEEEeeCCcchhh--hhhhhccccccc
Q psy1172 225 VESHHDWIKALVRDCILGLLINLSVDDFKEVE--GRSRRFQESLNT 268 (276)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~--~~a~~ygv~~~~ 268 (276)
++..++|.+++ +++|+++.|.+.... .+++.||+..-+
T Consensus 80 ~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~v~~~P 119 (158)
T 3eyt_A 80 PISLKAFLHEY------RIKFPVGVDQPGDGAMPRTMAAYQMRGTP 119 (158)
T ss_dssp HHHHHHHHHHT------TCCSCEEEECCCSSSSCHHHHHTTCCSSS
T ss_pred HHHHHHHHHHc------CCCceEEEcCccchhhHHHHHHcCCCCCC
Confidence 78888888888 788999988765211 367888886444
No 79
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.77 E-value=1.1e-18 Score=142.57 Aligned_cols=94 Identities=11% Similarity=0.150 Sum_probs=80.2
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------C
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------S 224 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------~ 224 (276)
+.+|+.+|+|+|++.+|+.++++ +++||++||+|| ++|||+|..++|.|++++++|+++|++|++||+| +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~-~~~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLS-IFKGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHH-HhCCCEEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 46899999999999999999999 899999999999 8999999999999999999999999999999985 5
Q ss_pred hHHHHHHHH-HHHhcccCCeeEEEe--eCCcch
Q psy1172 225 VESHHDWIK-ALVRDCILGLLINLS--VDDFKE 254 (276)
Q Consensus 225 ~~~~~~~~~-~~~~~~~~~~~~~~l--~D~~~~ 254 (276)
++.+++|.+ ++ +++|+++ .|.++.
T Consensus 84 ~~~~~~~~~~~~------~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 84 NDQITDFVCTRF------KSEFPIFDKIDVNGE 110 (170)
T ss_dssp HHHHHHHHHHHT------CCCSCBBCCCBSSST
T ss_pred HHHHHHHHHHhc------CCCceeEeeeccCCC
Confidence 677777877 55 6678888 465544
No 80
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.77 E-value=8.9e-19 Score=149.87 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=80.6
Q ss_pred cccCCCCCcEEecCC-CCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------C
Q psy1172 154 FAAALLPGCSLLGCQ-ASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------S 224 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~-G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------~ 224 (276)
..++.+|+|+|++.+ |+.++|+ +++||++||+|| ++|||+|+.++|.|++++++|+++|++||+||+| +
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~-~~~Gk~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~ 98 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLG-SLRGKVLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAK 98 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGG-GGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSC
T ss_pred hhcCccCceEeeeCCCCCCccHH-HcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCC
Confidence 367889999999999 9999999 899999999999 9999999999999999999999999999999986 3
Q ss_pred hHHHHHHHHHHHhcccCCeeEEEeeCCc
Q psy1172 225 VESHHDWIKALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l~D~~ 252 (276)
++.+++|++........+++||+++|.+
T Consensus 99 ~~~i~~f~~~~~~~~~~~~~fp~l~d~d 126 (208)
T 2f8a_A 99 NEEILNSLKYVRPGGGFEPNFMLFEKCE 126 (208)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhcccccccccceEEEEEee
Confidence 5677777762110001177899997644
No 81
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.77 E-value=1.6e-18 Score=137.81 Aligned_cols=111 Identities=14% Similarity=0.031 Sum_probs=93.7
Q ss_pred cccccCCCCCcEEecCCCCeEEec-ccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHH-HhCCcEEEEEeCCC-hHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILE-CSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEF-EQRTCKVIALSCDS-VESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~-~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~-~~~gv~Vv~VS~D~-~~~~ 228 (276)
.+.+|+++|+|++++.+|+.++++ ++++||++||+|| ++|||+|+.+++.|.+++++| .++|+.|++|++|. .+..
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~ 82 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAW 82 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHH
T ss_pred cccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHH
Confidence 457899999999999999999886 2479999999999 999999999999999999999 88899999999985 4566
Q ss_pred HHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccccC
Q psy1172 229 HDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNTY 269 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~~ 269 (276)
+++.+.+ +++|+++.|.......+++.||+..-++
T Consensus 83 ~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~v~~~P~ 117 (148)
T 3fkf_A 83 ETAIKKD------TLSWDQVCDFTGLSSETAKQYAILTLPT 117 (148)
T ss_dssp HHHHHHT------TCCSEEECCSCGGGCHHHHHTTCCSSSE
T ss_pred HHHHHHc------CCCceEEEccCCcchHHHHhcCCCCcCE
Confidence 7777666 7899999987554556788899864443
No 82
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.77 E-value=2.7e-18 Score=139.33 Aligned_cols=103 Identities=17% Similarity=0.229 Sum_probs=87.9
Q ss_pred CCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcc-cHHHHHHHHHHHHHHHh----CCcEEEEEeCCC----hHHH
Q psy1172 158 LLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPV-CTTELARVLQLIKEFEQ----RTCKVIALSCDS----VESH 228 (276)
Q Consensus 158 ~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~-C~~el~~l~~~~~~~~~----~gv~Vv~VS~D~----~~~~ 228 (276)
.+|+|+|++.+|+.++++ +++||++||+|| ++|||+ |..+++.|++++++|++ .+++|++||+|+ ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~-~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDK-DYLGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGG-GGTTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHH-HcCCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 589999999999999999 899999999999 899998 99999999999999987 489999999985 5677
Q ss_pred HHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 229 HDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
++|.+++ +++|+++.+.......+++.||+...+
T Consensus 80 ~~~~~~~------~~~~~~l~~~~d~~~~~~~~~~v~~~p 113 (164)
T 2ggt_A 80 ANYVKEF------SPKLVGLTGTREEVDQVARAYRVYYSP 113 (164)
T ss_dssp HHHHHTT------CSSCEEEECCHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHc------CCCeEEEeCCHHHHHHHHHhcCeEEEe
Confidence 7777776 778888865433445678899986543
No 83
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.77 E-value=1.3e-18 Score=139.72 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=91.2
Q ss_pred ccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHHHH
Q psy1172 155 AAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHDWIK 233 (276)
Q Consensus 155 ~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~~~ 233 (276)
+|+.+|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|+++++++.++++.|++|+.| +++..++|.+
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~-~~~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELS-DLKGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHH-HcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHH
Confidence 689999999999999999999 889999999999 9999999999999999999999889999999996 5677888888
Q ss_pred HHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 234 ALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 234 ~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
++ +++|+++.|.+.. +++.||+..-+
T Consensus 80 ~~------~~~~~~~~d~~~~---~~~~~~v~~~P 105 (151)
T 2f9s_A 80 SY------GVNFPVVLDTDRQ---VLDAYDVSPLP 105 (151)
T ss_dssp HH------TCCSCEEEETTSH---HHHHTTCCSSC
T ss_pred Hc------CCCceEEECCchH---HHHhcCCCCCC
Confidence 88 7789999886543 57788875433
No 84
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.76 E-value=9.8e-19 Score=149.70 Aligned_cols=89 Identities=7% Similarity=0.078 Sum_probs=78.2
Q ss_pred ccCCCCCcEEecCC-CCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------Ch
Q psy1172 155 AAALLPGCSLLGCQ-ASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------SV 225 (276)
Q Consensus 155 ~G~~aPdF~L~~~~-G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------~~ 225 (276)
..+.+|+|+|++.+ |+.++|+ +|+||++||+|| ++|||+| .|+|.|++++++|+++|++||+||.| ++
T Consensus 13 ~~~~~pdF~l~d~~~G~~v~Ls-~~kGKvvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~ 89 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEEYIPFK-QYAGKYVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGEN 89 (207)
T ss_dssp --CCGGGCEEEBTTSSCEEEGG-GGTTSEEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCH
T ss_pred ccCccCCeEeeeCCCCCEEcHH-HhCCCEEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCH
Confidence 45679999999999 9999999 899999999999 9999999 79999999999999999999999964 45
Q ss_pred HHHHHHHH------HHHhcccCCeeEEEeeCCc
Q psy1172 226 ESHHDWIK------ALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 226 ~~~~~~~~------~~~~~~~~~~~~~~l~D~~ 252 (276)
+.+++|++ ++ +++||+++|.+
T Consensus 90 ~~i~~f~~~~~~~~~~------~~~fp~l~d~d 116 (207)
T 2r37_A 90 SEILPTLKYVRPGGGF------VPNFQLFEKGD 116 (207)
T ss_dssp HHHHHHHHHTSSCTTC------CCSSEEBCCCC
T ss_pred HHHHHHHHhcchhhcc------CccceeeeEec
Confidence 67788887 55 77899997654
No 85
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.76 E-value=1.2e-18 Score=145.96 Aligned_cols=106 Identities=14% Similarity=0.197 Sum_probs=93.0
Q ss_pred cccccCCCCCcEEe-cCCCCeEEecccCCCCe-EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC-------
Q psy1172 152 DRFAAALLPGCSLL-GCQASLVILECSIPAFW-GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC------- 222 (276)
Q Consensus 152 ~~~~G~~aPdF~L~-~~~G~~v~l~~~~~gk~-vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~------- 222 (276)
.+.+|+.+|+|+|+ +.+|+.++|+ +++||+ +||+|| ++|||+|+.+++.|++++++|.++++.|++|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~-~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLE-DVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHH-HHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHH-HhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 45789999999999 9999999999 899985 999999 999999999999999999999999999999999
Q ss_pred -CChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 223 -DSVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 223 -D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|+++.+++|.+++ +++|+++.|.+.. +++.||+..-+
T Consensus 95 ~d~~~~~~~~~~~~------~~~~~~~~d~~~~---~~~~~~v~~~P 132 (196)
T 2ywi_A 95 EDSPENMKKVAEEL------GYPFPYLYDETQE---VAKAYDAACTP 132 (196)
T ss_dssp GGSHHHHHHHHHHH------TCCSCEEECSSCH---HHHHHTCCEES
T ss_pred ccCHHHHHHHHHHc------CCCceEEECCchH---HHHHhCCCCCC
Confidence 5677888888888 7789999986554 57788875443
No 86
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.76 E-value=5.1e-19 Score=143.10 Aligned_cols=107 Identities=13% Similarity=0.181 Sum_probs=92.7
Q ss_pred cccCCCCCcEEec-CCCCeEEecccCCCCeEEEEEEcCCCCcccHHH-HHHHHHHHHHHHhCCcEEEEEeC-------CC
Q psy1172 154 FAAALLPGCSLLG-CQASLVILECSIPAFWGILFSHPSDFTPVCTTE-LARVLQLIKEFEQRTCKVIALSC-------DS 224 (276)
Q Consensus 154 ~~G~~aPdF~L~~-~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~e-l~~l~~~~~~~~~~gv~Vv~VS~-------D~ 224 (276)
..|.++|+|++++ .+|+.++|+ +++||++||+|| ++|||+|..| ++.|++++++|+++|+.|++||+ |+
T Consensus 4 ~~g~~~p~~~~~~~~~g~~~~l~-~~~gk~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 81 (160)
T 3lor_A 4 LDNAPLLELDVQEWVNHEGLSNE-DLRGKVVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMT 81 (160)
T ss_dssp CTTCCBCCCCEEEESSSCCCCHH-HHTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred cCCCcCCCcccccccCCCccCHH-HhCCCEEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCC
Confidence 3689999999999 899999999 899999999999 8999999997 99999999999999999999998 57
Q ss_pred hHHHHHHHHHHHhcccCCeeEEEeeCCcchhh---hhhhhccccccc
Q psy1172 225 VESHHDWIKALVRDCILGLLINLSVDDFKEVE---GRSRRFQESLNT 268 (276)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~---~~a~~ygv~~~~ 268 (276)
++..++|.+++ +++|+++.|...... .+++.||+..-+
T Consensus 82 ~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P 122 (160)
T 3lor_A 82 PEALKVFIDEF------GIKFPVAVDMPREGQRIPSTMKKYRLEGTP 122 (160)
T ss_dssp HHHHHHHHHHT------TCCSCEEEECCCTTCSSCHHHHHTTCCSSS
T ss_pred HHHHHHHHHHc------CCCCcEEECCccccchhhhHHHhcccCccc
Confidence 78888888888 788999988766411 257788876444
No 87
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.75 E-value=2.7e-18 Score=145.49 Aligned_cols=105 Identities=14% Similarity=0.199 Sum_probs=87.5
Q ss_pred ccccCCC--CCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcc-cHHHHHHHHHHHHHHHhC---CcEEEEEeCC---
Q psy1172 153 RFAAALL--PGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPV-CTTELARVLQLIKEFEQR---TCKVIALSCD--- 223 (276)
Q Consensus 153 ~~~G~~a--PdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~-C~~el~~l~~~~~~~~~~---gv~Vv~VS~D--- 223 (276)
..+|+++ |+|+|++.+|+.++++ +++||++||+|| ++|||+ |..+++.|+++++++.++ +++||+||+|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~-~~~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEK-NLLGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGG-GGTTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHH-HcCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 3578886 9999999999999999 899999999999 999997 999999999999999864 8999999998
Q ss_pred -ChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccc
Q psy1172 224 -SVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
+++.+++|.+++ +.+|+++.+.......+++.||+.
T Consensus 91 d~~~~~~~~~~~~------~~~~~~l~~~~d~~~~~~~~~gv~ 127 (200)
T 2b7k_A 91 DSPAVLKEYLSDF------HPSILGLTGTFDEVKNACKKYRVY 127 (200)
T ss_dssp CCHHHHHHHHTTS------CTTCEEEECCHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHc------CCCceEEeCCHHHHHHHHHHcCcE
Confidence 567777777766 667887776544556678899987
No 88
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.75 E-value=1.2e-18 Score=149.44 Aligned_cols=93 Identities=20% Similarity=0.338 Sum_probs=83.8
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
+++||+++|++++++++||+..+ . |. +.|++||||++|+|++.+.++...+|+.+|+++.|++||.++++++.
T Consensus 115 ~~~fp~l~D~~~~~~~~ygv~~~-~----g~--~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~~~~~~~~~ 187 (213)
T 2i81_A 115 NIKHTLLSDITKSISKDYNVLFD-D----SV--SLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYGDV 187 (213)
T ss_dssp SCSSEEEECTTSHHHHHTTCEET-T----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHCCB
T ss_pred CCCceEEECCchHHHHHhCCccc-c----CC--cccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhhhcCCC
Confidence 79999999999999999999752 1 43 57999999999999999998888999999999999999999999999
Q ss_pred cCCCCCCCCceeeCCCCCch
Q psy1172 98 TPVDWKVGMEIEVRPGLVSK 117 (276)
Q Consensus 98 ~p~~w~~g~~~~~~p~~~~~ 117 (276)
||+||++|+++|++++.+.+
T Consensus 188 cp~~w~~g~~~~~~~~~~~~ 207 (213)
T 2i81_A 188 CPANWQKGKVSMKPSEEGVA 207 (213)
T ss_dssp CCTTCCTTSCCBCSSTTTHH
T ss_pred cCCCCCcCCccccCCchhHH
Confidence 99999999999988765543
No 89
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.75 E-value=1.1e-18 Score=147.89 Aligned_cols=95 Identities=29% Similarity=0.549 Sum_probs=85.0
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
+++||+++|.+++++++||+..... |. ..|++||||++|+|++.+.++...+++.+|+++.|++||.++++++.
T Consensus 99 ~~~~p~l~D~~~~~~~~ygv~~~~~----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~ 172 (202)
T 1uul_A 99 QMNIPILADKTKCIMKSYGVLKEED----GV--AYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEV 172 (202)
T ss_dssp SCSSCEEECTTCHHHHHHTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHSCB
T ss_pred CCceeEEECCchHHHHHcCCccCCC----Cc--eeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhhhhhhcCCc
Confidence 7999999999999999999975542 43 56999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceeeCCCCCchh
Q psy1172 98 TPVDWKVGMEIEVRPGLVSKD 118 (276)
Q Consensus 98 ~p~~w~~g~~~~~~p~~~~~~ 118 (276)
||+||++|+++|++++.+.++
T Consensus 173 ~p~~w~~g~~~~~~~~~~~~~ 193 (202)
T 1uul_A 173 CPANWKPGDKTMKPDPEKSKE 193 (202)
T ss_dssp BCTTCCTTSCCBCSSTGGGHH
T ss_pred cCCCcCCCCceeccChhhHHH
Confidence 999999999999887655443
No 90
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.75 E-value=4.1e-18 Score=136.68 Aligned_cols=104 Identities=17% Similarity=0.304 Sum_probs=90.8
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC--CChHHHHH
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC--DSVESHHD 230 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~--D~~~~~~~ 230 (276)
..+|+.+|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|+++++++.++++.|++|+. |+.+..++
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~-~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 79 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGKTVSNA-DLQGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQ 79 (153)
T ss_dssp --CCTTCCSCEEECTTSCEEEHH-HHTTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHH
T ss_pred CCCCCCCCCcEeecCCCCCccHH-HhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHH
Confidence 45899999999999999999999 789999999999 999999999999999999999999999999995 67788888
Q ss_pred HHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
|.+++ +++|+++.|.... +++.||+..-
T Consensus 80 ~~~~~------~~~~~~~~d~~~~---~~~~~~i~~~ 107 (153)
T 2l5o_A 80 YVKDY------GLPFTVMYDADKA---VGQAFGTQVY 107 (153)
T ss_dssp HHHHT------TCCSEEEECSSCH---HHHHHTCCSS
T ss_pred HHHHc------CCCceEEcCchHH---HHHHcCCCcc
Confidence 88887 7789999886543 5778887543
No 91
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.8e-19 Score=147.26 Aligned_cols=89 Identities=8% Similarity=0.094 Sum_probs=70.3
Q ss_pred ccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------ChH
Q psy1172 155 AAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------SVE 226 (276)
Q Consensus 155 ~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------~~~ 226 (276)
-|..+|+|+|+|.+|+.++|+ +++||++||+|| ++|||+|. ++|.|++++++|+++|++||+||+| +++
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~-~~~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFD-QLKGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGG-GGTTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC--------
T ss_pred chhheeeeEEEcCCCCEecHH-HcCCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH
Confidence 467899999999999999999 899999999999 99999999 9999999999999999999999984 556
Q ss_pred HHHHHH-HHHHhcccCCeeEEEeeCCc
Q psy1172 227 SHHDWI-KALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~l~D~~ 252 (276)
.+++|. +++ +++|++++|.+
T Consensus 85 ~~~~~~~~~~------~~~~p~~~d~d 105 (171)
T 3cmi_A 85 EIAQFCQLNY------GVTFPIMKKID 105 (171)
T ss_dssp ----------------CCCSCBBCCCB
T ss_pred HHHHHHHhcc------CCCceEEeecc
Confidence 777777 676 77899998754
No 92
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.75 E-value=5.1e-18 Score=138.80 Aligned_cols=101 Identities=16% Similarity=0.290 Sum_probs=87.7
Q ss_pred CCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcc-cHHHHHHHHHHHHHHHh----CCcEEEEEeCC----ChHHHHH
Q psy1172 160 PGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPV-CTTELARVLQLIKEFEQ----RTCKVIALSCD----SVESHHD 230 (276)
Q Consensus 160 PdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~-C~~el~~l~~~~~~~~~----~gv~Vv~VS~D----~~~~~~~ 230 (276)
|+|+|++.+|+.++++ +++||++||+|| ++|||+ |+.+++.|++++++|++ .+++||+||+| +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~-~~~gk~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKA-DFRGQWVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETT-TTTTSEEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHH-HhCCCEEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 9999999999999999 899999999999 999998 99999999999999976 58999999997 4677777
Q ss_pred HHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|.+++ +++|+++.+.......+++.||+...+
T Consensus 85 ~~~~~------~~~~~~l~~~~~~~~~~~~~~~v~~~p 116 (171)
T 2rli_A 85 YVQDF------HPRLLGLTGSTKQVAQASHSYRVYYNA 116 (171)
T ss_dssp HHHTT------CTTCCEEECCHHHHHHHHHHSCCCCEE
T ss_pred HHHHc------CCCeEEEeCCHHHHHHHHHHhCeEEEe
Confidence 77777 678888887655555678899987543
No 93
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.75 E-value=2.1e-18 Score=142.59 Aligned_cols=107 Identities=12% Similarity=0.095 Sum_probs=86.1
Q ss_pred cccCCCC-CcEEecCCCCeEEecccCCCCeEEEEEEcCCCCc-ccHHHHHHHHHHHHHHHh--CCcEEEEEeCC---ChH
Q psy1172 154 FAAALLP-GCSLLGCQASLVILECSIPAFWGILFSHPSDFTP-VCTTELARVLQLIKEFEQ--RTCKVIALSCD---SVE 226 (276)
Q Consensus 154 ~~G~~aP-dF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp-~C~~el~~l~~~~~~~~~--~gv~Vv~VS~D---~~~ 226 (276)
.+|+++| +|+|++.+|+.++|+ +++||++||+|| ++||| +|..+++.|++++++|++ .+++||+||+| +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~-~~~Gk~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLK-NLKGKPIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGG-GGTTSCEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchH-HhCCCEEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 4799999 999999999999999 899999999999 99998 699999999999999975 56999999987 567
Q ss_pred HHHHHHHHHHhcccCCe-eEEEee-CCcchhhhhhhhccccc
Q psy1172 227 SHHDWIKALVRDCILGL-LINLSV-DDFKEVEGRSRRFQESL 266 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~l~-D~~~~~~~~a~~ygv~~ 266 (276)
.+++|++++ ++.. .++++. +......+++++||+..
T Consensus 80 ~~~~~~~~~----~~~~~~w~~l~~~~~~~~~~~~~~~g~~~ 117 (170)
T 3me7_A 80 DIKRFQKEY----GIDGKGWKVVKAKTSEDLFKLLDAIDFRF 117 (170)
T ss_dssp HHHHHHHHT----TCCSSSEEEEEESSHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHc----CCCCCCeEEEeCCCHHHHHHHHHHCCeEE
Confidence 777887777 2222 344433 32345566788888643
No 94
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.75 E-value=1.6e-18 Score=139.38 Aligned_cols=97 Identities=9% Similarity=0.078 Sum_probs=84.9
Q ss_pred CCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHh
Q psy1172 158 LLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVR 237 (276)
Q Consensus 158 ~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~ 237 (276)
++|+|++. .+|+.++|+ +++||++||+|| ++|||+|+.++|.|++++++|++.++.|++|++|+++..++|.+++
T Consensus 4 pa~~~~~~-~~G~~~~l~-~~~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~-- 78 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQ-SLKAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQT-- 78 (151)
T ss_dssp ---CEEET-TTCCEECGG-GCCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHS--
T ss_pred Ccchhhcc-cCCCEecHH-HhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHc--
Confidence 34555444 799999999 899999999999 9999999999999999999998899999999999999999998888
Q ss_pred cccCCeeEEEeeCCcchhhhhhhhcc
Q psy1172 238 DCILGLLINLSVDDFKEVEGRSRRFQ 263 (276)
Q Consensus 238 ~~~~~~~~~~l~D~~~~~~~~a~~yg 263 (276)
+++|+++.|.......+++.||
T Consensus 79 ----~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 79 ----PVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp ----CCSSCEEEECCSCHHHHHHTTT
T ss_pred ----CCCCceEecCccchHHHHHHhC
Confidence 8889999887767667788898
No 95
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.74 E-value=3.6e-19 Score=149.22 Aligned_cols=91 Identities=9% Similarity=0.071 Sum_probs=77.7
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-------- 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-------- 223 (276)
.+..++++|+|+|+|.+|+.++|+ +++||++||+|| ++|||+|..++|.|++++++|+++|++||+||+|
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~-~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~ 96 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLV-QHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPG 96 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGG-GGTTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSS
T ss_pred hhcCCCccCCeEEEcCCCCEeeHH-HhCCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCC
Confidence 456789999999999999999999 899999999999 9999999999999999999999999999999987
Q ss_pred ChHHHHHHHH-HHHhcccCCeeEEEeeC
Q psy1172 224 SVESHHDWIK-ALVRDCILGLLINLSVD 250 (276)
Q Consensus 224 ~~~~~~~~~~-~~~~~~~~~~~~~~l~D 250 (276)
+++..++|.+ .+ +++|+++++
T Consensus 97 ~~~~~~~~~~~~~------~~~~p~~~~ 118 (187)
T 3dwv_A 97 NEEEIKEFVCTKF------KAEFPIMAK 118 (187)
T ss_dssp BTTHHHHSCCBCC------CCSSCBBCC
T ss_pred CHHHHHHHHHhcc------CCCCceeec
Confidence 3444444443 23 667888863
No 96
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.74 E-value=4.6e-18 Score=134.50 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=88.6
Q ss_pred ccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC----ChH
Q psy1172 151 IDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD----SVE 226 (276)
Q Consensus 151 ~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D----~~~ 226 (276)
..+.+|+.+|+|++++.+|+.++++ + +||++||+|| ++|||+|+.+++.|+++++++.+.++.|++|+.| +++
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~-~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 83 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIP-N-KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQ 83 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEES-C-TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHH
T ss_pred ccccCCCcCCCceeecCCCCEEeHH-H-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHH
Confidence 3456899999999999999999999 6 9999999999 9999999999999999999998789999999996 566
Q ss_pred HHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 227 SHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
..++|.+.+ +++|+++.|.... +++.|++..-+
T Consensus 84 ~~~~~~~~~------~~~~~~~~d~~~~---~~~~~~v~~~P 116 (145)
T 3erw_A 84 VVEDFIKAN------KLTFPIVLDSKGE---LMKEYHIITIP 116 (145)
T ss_dssp HHHHHHHHT------TCCSCEEECSSSH---HHHHTTCCEES
T ss_pred HHHHHHHHc------CCceeEEEcCchh---HHHhcCcCccC
Confidence 777777777 7789999886554 57788875443
No 97
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.74 E-value=9.7e-18 Score=136.01 Aligned_cols=100 Identities=14% Similarity=0.239 Sum_probs=88.7
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHD 230 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~ 230 (276)
++.+|+++|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|++++++|.++++.+++|+.|+ ++..++
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~-~~~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSA-SLKGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGG-GGTTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechh-HcCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 457899999999999999999999 899999999999 99999999999999999999999999999999985 677788
Q ss_pred HHHHHHhcccCCeeEEEeeCCcchhhhhhhhcc
Q psy1172 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRRFQ 263 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~yg 263 (276)
|.+++ +++|+++.|.. +.++.|+
T Consensus 85 ~~~~~------~~~~~~~~~~~----~~~~~~~ 107 (165)
T 3or5_A 85 YMKTQ------GIIYPVMMATP----ELIRAFN 107 (165)
T ss_dssp HHHHH------TCCSCEEECCH----HHHHHHH
T ss_pred HHHHc------CCCCceEecCH----HHHHHHh
Confidence 88888 77889888753 3566663
No 98
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.74 E-value=2.4e-18 Score=139.63 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=90.0
Q ss_pred ccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHH
Q psy1172 151 IDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHD 230 (276)
Q Consensus 151 ~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~ 230 (276)
..+.+|+.+|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|++++++|.+.++.+++|+.|+ ..++
T Consensus 13 ~~~~~G~~~p~f~l~~~~g~~~~l~-~~~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~~~ 88 (158)
T 3hdc_A 13 PLVRTGALAPNFKLPTLSGENKSLA-QYRGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RFPE 88 (158)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEESG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SCCG
T ss_pred cccCCCCcCCCceeEcCCCCEEehH-HhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HHHH
Confidence 3457899999999999999999999 899999999999 99999999999999999999988899999999987 3445
Q ss_pred HHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 231 WIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|.+.+ +++|+++.|.+.. +++.||+..-+
T Consensus 89 ~~~~~------~~~~~~~~d~~~~---~~~~~~v~~~P 117 (158)
T 3hdc_A 89 KYRRA------PVSFNFLSDATGQ---VQQRYGANRLP 117 (158)
T ss_dssp GGGGC------CCSCEEEECTTSH---HHHHTTCCSSS
T ss_pred HHHHc------CCCceEEECchHH---HHHHhCCCCcc
Confidence 55555 7789999986553 67788876443
No 99
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.73 E-value=3.3e-18 Score=144.38 Aligned_cols=92 Identities=33% Similarity=0.482 Sum_probs=82.7
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
+++||+++|.++++++.||+..... |. ..|++||||++|+|++.+.++...+++.+|+++.|++||..+++++.
T Consensus 97 ~~~~p~l~D~~~~~~~~~gv~~~~~----~~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~~~~~~~~~ 170 (197)
T 1qmv_A 97 PLNIPLLADVTRRLSEDYGVLKTDE----GI--AYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEV 170 (197)
T ss_dssp SCSSCEEECTTCHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHCCB
T ss_pred CCceEEEECCcHHHHHHcCCccCCC----Cc--eeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcchhhccCCc
Confidence 7999999999999999999975432 33 46999999999999999998888899999999999999988889999
Q ss_pred cCCCCCCCCceeeCCCCC
Q psy1172 98 TPVDWKVGMEIEVRPGLV 115 (276)
Q Consensus 98 ~p~~w~~g~~~~~~p~~~ 115 (276)
||+||++|+++|++|+.+
T Consensus 171 cp~~w~~g~~~~~~~~~~ 188 (197)
T 1qmv_A 171 CPAGWKPGSDTIKPNVDD 188 (197)
T ss_dssp BCTTCCTTSCCBCSSHHH
T ss_pred cCCCcCcCCccccCCccc
Confidence 999999999999887543
No 100
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.73 E-value=9e-18 Score=139.30 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=86.9
Q ss_pred cccccccCCCCCcEEecCCC--CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC-CChH
Q psy1172 150 LIDRFAAALLPGCSLLGCQA--SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC-DSVE 226 (276)
Q Consensus 150 ~~~~~~G~~aPdF~L~~~~G--~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~-D~~~ 226 (276)
...+.+|+++|+|+|++.+| +.++++ +++||++||+|| ++|||+|..+++.|++++++ |+.|++||+ |+++
T Consensus 27 ~~~~~~G~~~P~f~l~~~~g~~~~~~l~-~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~ 100 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLPSVQDPARRLTEA-DLKGKPALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNA 100 (176)
T ss_dssp STTTTTTSBCCCCEEEBSSCTTSEEEGG-GGCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHH
T ss_pred ccccccCCcCCCcEecccCCCCceecHH-HhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHH
Confidence 34567999999999999999 789998 899999999999 99999999999999998775 899999996 5778
Q ss_pred HHHHHHHHHHhcccCCeeEE-EeeCCcchhhhhhhhccccccc
Q psy1172 227 SHHDWIKALVRDCILGLLIN-LSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
..++|.+++ +++|+ ++.|.+. .+++.||+..-+
T Consensus 101 ~~~~~~~~~------~~~~~~~~~d~~~---~~~~~~~v~~~P 134 (176)
T 3kh7_A 101 AAIKWLNEL------HNPYLLSISDADG---TLGLDLGVYGAP 134 (176)
T ss_dssp HHHHHHHHT------TCCCSEEEEETTC---HHHHHHTCCSSC
T ss_pred HHHHHHHHc------CCCCceEEECCcc---hHHHHcCCCCCC
Confidence 888888887 66666 4667554 467788886433
No 101
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.72 E-value=8e-18 Score=135.30 Aligned_cols=105 Identities=17% Similarity=0.198 Sum_probs=90.5
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC---CChHHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC---DSVESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~---D~~~~~ 228 (276)
++.+|+++|+|++++.+|+.++++ +++ |++||+|| ++||++|..+++.|+++++++ +++|++|++ |+++..
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~-~~~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPA-TVS-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTT-TSC-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechH-HcC-CeEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 567999999999999999999999 788 99999999 999999999999999999999 899999999 566777
Q ss_pred HHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 229 HDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
++|.+++ +++|+++.|.......+++.||+..-+
T Consensus 78 ~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~v~~~P 111 (154)
T 3ia1_A 78 LEYMKTY------PRFIPLLASDRDRPHEVAARFKVLGQP 111 (154)
T ss_dssp HHHHTTC------TTEEECBCCSSCCHHHHHTTSSBCSSC
T ss_pred HHHHHHc------CCCcccccccccchHHHHHHhCCCccc
Confidence 7776666 779999988444555678889986443
No 102
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.72 E-value=5.2e-18 Score=138.27 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=91.0
Q ss_pred ccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC---------
Q psy1172 153 RFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--------- 223 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--------- 223 (276)
+.+|+.+|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|.+++++|. ++.|++|+.|
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~-~~~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~ 86 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLN-NVGGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALG 86 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGG-GCCSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHT
T ss_pred ccccCcCCCCEeecCCCCEeeHH-HhCCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccc
Confidence 46899999999999999999999 899999999999 9999999999999999999997 8999999997
Q ss_pred ----------ChHHHHHHHHHHHhcccCCe-eEEEeeCCcchhhhhhhhcccccccC
Q psy1172 224 ----------SVESHHDWIKALVRDCILGL-LINLSVDDFKEVEGRSRRFQESLNTY 269 (276)
Q Consensus 224 ----------~~~~~~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~~~~~ 269 (276)
+.+..++|.+.+ ++ +|+++.| +. .+++.||+..-++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d-~~---~~~~~~~v~~~P~ 133 (165)
T 3ha9_A 87 LNKPGYPPPDTPEMFRKFIANY------GDPSWIMVMD-DG---SLVEKFNVRSIDY 133 (165)
T ss_dssp CCSTTSCCCCCHHHHHHHHHHH------SCTTSEEEEC-CS---HHHHHTTCCSSSE
T ss_pred cccccCCCCCCHHHHHHHHHHc------CCCCeeEEeC-hH---HHHHHhCCCCceE
Confidence 677888888888 77 8999988 44 4678888865443
No 103
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.71 E-value=6.6e-18 Score=141.80 Aligned_cols=93 Identities=27% Similarity=0.393 Sum_probs=74.6
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
.+++||+++|++++++++||+..+ . |+ ..|++||||++|+|++.+.++...+++.+|+++.|++|+.++++++
T Consensus 93 ~~~~~~~l~D~~~~~~~~~gv~~~-~----g~--~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~ 165 (192)
T 2h01_A 93 GNIKHTLISDISKSIARSYDVLFN-E----SV--ALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGD 165 (192)
T ss_dssp CSCSSEEEECTTSHHHHHTTCEET-T----TE--ECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCeEECCcHHHHHHhCCcCc-C----Cc--eeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhhhhcCC
Confidence 379999999999999999999752 1 43 4689999999999999999888889999999999999999999999
Q ss_pred CcCCCCCCCCceeeCCCCCc
Q psy1172 97 ATPVDWKVGMEIEVRPGLVS 116 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p~~~~ 116 (276)
.||+||++|+++|++++...
T Consensus 166 ~cp~~w~~~~~~~~~~~~~~ 185 (192)
T 2h01_A 166 VCPANWQKGKESMKPSEEGV 185 (192)
T ss_dssp CCCSSCCCC-----------
T ss_pred CccCCCCCCCccccCCchhh
Confidence 99999999999998875443
No 104
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.71 E-value=1e-17 Score=152.60 Aligned_cols=123 Identities=19% Similarity=0.289 Sum_probs=105.9
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
++++||||+|++++++++||++.. | .+.|+|||||++|+|+++|. ++++++|++|||+.|++|+ .+++.+
T Consensus 75 ~~l~fp~l~D~~~~v~~~ygv~~~------~--~~~r~tfiId~~G~i~~~~~-~v~~~~h~~~~l~~~~~~~-~~~~~~ 144 (322)
T 4eo3_A 75 NDLKVTLLSDPEGILHEFFNVLEN------G--KTVRSTFLIDRWGFVRKEWR-RVKVEGHVQEVKEALDRLI-EEDLSL 144 (322)
T ss_dssp HTCCSEEEECTTCHHHHHTTCEET------T--EECCEEEEECTTSBEEEEEE-SCCSTTHHHHHHHHHHHHH-HHHTSC
T ss_pred hCCceEEEEcCchHHHHhcCCCCC------C--cCccEEEEECCCCEEEEEEe-CCCccccHHHHHHHHhhhc-hhhhHH
Confidence 459999999999999999999843 2 26799999999999999996 8999999999999999998 467889
Q ss_pred CcCCCCCCCCceeeCCCCCchhhhccC----------CCCCceeeeeechhhhchhcccCCCC
Q psy1172 97 ATPVDWKVGMEIEVRPGLVSKDSEGKL----------TCKPIFSRIVSLFAEQNELQFAVPGG 149 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p~~~~~~~~~~~----------~~~~w~~~~~~~~~~~~~~~~a~~~~ 149 (276)
....+|+.-=+-+-+-+++.|+.++.+ +.|||.|.+++.......+..+.+.+
T Consensus 145 ~~~I~~RRSiR~F~~~~V~~e~l~~ileaA~~APS~~N~Qpwrfivv~d~e~~~~l~~~~~~~ 207 (322)
T 4eo3_A 145 NKHIEWRRARRALKKDRVPREELELLIKAAHLAPSCMNNQPWRFVVVDEEELLKKIHEALPGG 207 (322)
T ss_dssp CHHHHHCCCCCCBCCCCCCHHHHHHHHHHHHTSCCGGGCCCCEEEEECCHHHHHHHHTTSCGG
T ss_pred HHHHHhhhccCCcCccccCHHHHHHHHHHHHhCcCcCCCcCeEEEEEeCHHHHHHHHHhhhhc
Confidence 999999998888888889999887654 78999999998887777776655443
No 105
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.71 E-value=6.3e-17 Score=129.59 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=88.5
Q ss_pred ccccCCCC-CcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHH
Q psy1172 153 RFAAALLP-GCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHD 230 (276)
Q Consensus 153 ~~~G~~aP-dF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~ 230 (276)
+.+|+++| +|++++.+|+.++++ +++||++||+|| ++|||+|+.+++.|+++++++.++++.|++|+.|+ .+..++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~-~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLA-DLKGKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEEST-TTTTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHH-HcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 46899999 999999999999999 899999999999 99999999999999999999998899999999986 456677
Q ss_pred HHHHHHhcccCCee-EEEeeCCcchhhhhhhhccccccc
Q psy1172 231 WIKALVRDCILGLL-INLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 231 ~~~~~~~~~~~~~~-~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|.+++ +++ ++++.|.+. .+++.||+..-+
T Consensus 81 ~~~~~------~~~~~~~~~d~~~---~~~~~~~v~~~P 110 (152)
T 2lja_A 81 MVTKD------QLKGIQLHMGTDR---TFMDAYLINGIP 110 (152)
T ss_dssp HHHHH------TCCSEEEECSSCT---HHHHHTTCCSSC
T ss_pred HHHhc------CCCCceeecCcch---hHHHHcCcCCCC
Confidence 77777 444 567766543 457788875433
No 106
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.71 E-value=5.9e-17 Score=134.07 Aligned_cols=94 Identities=14% Similarity=0.027 Sum_probs=78.5
Q ss_pred cccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCc-ccHHHHHHHHHHHHHHHhCC--cEEEEEeCC----ChH
Q psy1172 154 FAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTP-VCTTELARVLQLIKEFEQRT--CKVIALSCD----SVE 226 (276)
Q Consensus 154 ~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp-~C~~el~~l~~~~~~~~~~g--v~Vv~VS~D----~~~ 226 (276)
.+|.++|+|+|+|.+|++++|+ +|+||++||+|| .+||| +|..+++.|.++++.+++.| +++|+||+| +++
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~-d~~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~ 84 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTK-DLKGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPE 84 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHH-HHTTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHH
T ss_pred CCCCcCCCcEEECCCCCEEeHH-HhCCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHH
Confidence 4789999999999999999999 899999999999 99998 79999999999999997765 789999986 467
Q ss_pred HHHHHHHHHHhcccCCeeEEEeeCCc
Q psy1172 227 SHHDWIKALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~D~~ 252 (276)
.+++|++++... ...+.++.+..
T Consensus 85 ~l~~y~~~~~~~---~~~~~~ltg~~ 107 (170)
T 4hde_A 85 NLKAFIQKFTED---TSNWNLLTGYS 107 (170)
T ss_dssp HHHHHHTTTCSC---CTTEEEEBCSC
T ss_pred HHHHHHHHcCCC---CCCceecCccc
Confidence 777777776221 23477776644
No 107
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.70 E-value=3.5e-17 Score=137.19 Aligned_cols=89 Identities=24% Similarity=0.432 Sum_probs=80.2
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccC-CC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTK-KV 96 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~-~~ 96 (276)
+++||+++|++++++++||+..... |+ +.|++||||++|+|++++.++...+++.+|+++.|++|+.++++ ++
T Consensus 90 ~~~fp~l~D~~~~~~~~ygv~~~~~----g~--~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~p~~ 163 (186)
T 1n8j_A 90 KIKYAMIGDPTGALTRNFDNMREDE----GL--ADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGE 163 (186)
T ss_dssp GCCSEEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSTTC
T ss_pred CCceeEEECCchHHHHHhCCccCCC----Cc--eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHHHhhcCCC
Confidence 6999999999999999999975432 43 46999999999999999998888899999999999999999999 79
Q ss_pred CcCCCCCCCCceeeCC
Q psy1172 97 ATPVDWKVGMEIEVRP 112 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p 112 (276)
+||+||++|+++++++
T Consensus 164 ~~p~~w~~~~~~~~~~ 179 (186)
T 1n8j_A 164 VCPAKWKEGEATLAPS 179 (186)
T ss_dssp BBCTTCCTTSCCBCCS
T ss_pred ccCCCCCCCCccccCC
Confidence 9999999999999754
No 108
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.70 E-value=1.6e-17 Score=131.73 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=88.4
Q ss_pred cccCCCCCcEE--ecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC------Ch
Q psy1172 154 FAAALLPGCSL--LGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD------SV 225 (276)
Q Consensus 154 ~~G~~aPdF~L--~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D------~~ 225 (276)
.+|+++|+|++ .+.+|+.++++ +++||++||+|| ++|||+|..+++.|++++++|.++ +.|++|+.| ++
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~-~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQ-LIGEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHH-HTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchh-hcCCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 57999999999 67899999998 889999999999 999999999999999999999877 999999987 56
Q ss_pred HHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 226 ESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+..++|.+++ +++|+++.|.... +++.||+..-
T Consensus 79 ~~~~~~~~~~------~~~~~~~~d~~~~---~~~~~~v~~~ 111 (148)
T 2b5x_A 79 GKIKETAAEH------DITQPIFVDSDHA---LTDAFENEYV 111 (148)
T ss_dssp HHHHHHHHHT------TCCSCEEECSSCH---HHHHTCCCCS
T ss_pred HHHHHHHHHc------CCCcceEECCchh---HHHHhCCCCC
Confidence 7777887777 7789998886544 5778887543
No 109
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=9.8e-19 Score=141.74 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=89.5
Q ss_pred cccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHH-HHHHHH-hCCcEEEEEeCCCh-HHH
Q psy1172 152 DRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQ-LIKEFE-QRTCKVIALSCDSV-ESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~-~~~~~~-~~gv~Vv~VS~D~~-~~~ 228 (276)
.+.+|+.+|+|++++.+|+.++++ +++||++||+|| ++|||+|+.+++.|++ ++++++ +.++.|++|+.|+. +..
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~-~~~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLS-SLRGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 356899999999999999999999 899999999999 9999999999999998 999998 78999999999864 566
Q ss_pred HHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhcccc
Q psy1172 229 HDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
++|.+++ +++|+++.|.+. .+++.||+.
T Consensus 84 ~~~~~~~------~~~~~~~~d~~~---~~~~~~~~~ 111 (159)
T 2ls5_A 84 LAFAKST------GVTYPLGLDPGA---DIFAKYALR 111 (159)
Confidence 7777777 778999988654 457788854
No 110
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.69 E-value=2.5e-17 Score=131.21 Aligned_cols=102 Identities=15% Similarity=0.214 Sum_probs=81.4
Q ss_pred ccCCCCC-cEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh-CCcEEEEEeCCC-hHHHHHH
Q psy1172 155 AAALLPG-CSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ-RTCKVIALSCDS-VESHHDW 231 (276)
Q Consensus 155 ~G~~aPd-F~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~-~gv~Vv~VS~D~-~~~~~~~ 231 (276)
+|+.+|+ |+|++.+|+.++++ +++||++||+|| ++|||+|+.++|.|++++++|++ .+++|++|++|. .+..++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~-~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALP-SLAGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHH-HcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5789999 99999999999999 899999999999 89999999999999999999985 689999999984 5555555
Q ss_pred HHHHHhcccCCe-eEEEeeCCcchhhhhhhhccccc
Q psy1172 232 IKALVRDCILGL-LINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
.+++ +. .++++. ......+++.||+..
T Consensus 81 ~~~~------~~~~~~~~~--~d~~~~~~~~~~v~~ 108 (144)
T 1i5g_A 81 YAKM------PWLALPFED--RKGMEFLTTGFDVKS 108 (144)
T ss_dssp HTTC------SSEECCTTC--HHHHHHHHHHTTCCS
T ss_pred HHhC------CccccccCc--hHHHHHHHHHcCCCC
Confidence 5544 32 344442 112335677888753
No 111
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=5.3e-17 Score=149.49 Aligned_cols=107 Identities=10% Similarity=0.063 Sum_probs=93.4
Q ss_pred ccccccCCCCCcE-----EecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--
Q psy1172 151 IDRFAAALLPGCS-----LLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-- 223 (276)
Q Consensus 151 ~~~~~G~~aPdF~-----L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-- 223 (276)
..+.+|+++|+|+ |++.+|+.++|+ +++||++||+|| ++|||+|+.++|.|++++++|+++++.||+||.|
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLs-dl~GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~ 126 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLK-SLRGKVVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEY 126 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHH-HhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcc
Confidence 3467999999999 999999999999 899999999999 9999999999999999999999999999999985
Q ss_pred ----ChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 224 ----SVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 224 ----~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
+++..++|++++ +++|+++.|.+.. +++.|++..-+
T Consensus 127 ~~~d~~~~~~~~~~~~------~l~fpv~~D~~~~---l~~~ygV~~~P 166 (352)
T 2hyx_A 127 AFEKVPGNVAKGAANL------GISYPIALDNNYA---TWTNYRNRYWP 166 (352)
T ss_dssp GGGGCHHHHHHHHHHH------TCCSCEEECTTSH---HHHHTTCCEES
T ss_pred cccCCHHHHHHHHHHc------CCCccEEeCCcHH---HHHHcCCCccC
Confidence 467778888877 7889999886543 57788875443
No 112
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.68 E-value=3.3e-17 Score=141.46 Aligned_cols=91 Identities=24% Similarity=0.431 Sum_probs=68.2
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
+++||+++|++++++++||+. ... |. +.|++||||++|+|++.+.++...+++.+|+++.|++|+.++++++.
T Consensus 119 ~~~fp~l~D~~~~~~~~ygv~-~~~----g~--~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~~~~~~~~~ 191 (221)
T 2c0d_A 119 NVEFTLVSDINKDISKNYNVL-YDN----SF--ALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHVDTSGEV 191 (221)
T ss_dssp SCSSEEEECTTSHHHHHTTCE-ETT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHCCS
T ss_pred CCceEEEECCchHHHHHcCCc-ccC----CC--ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhcCCCc
Confidence 689999999999999999997 432 42 46999999999999999998888889999999999999999999999
Q ss_pred cCCCCCCCCceeeCCCCC
Q psy1172 98 TPVDWKVGMEIEVRPGLV 115 (276)
Q Consensus 98 ~p~~w~~g~~~~~~p~~~ 115 (276)
||+||++|+++|.+++.+
T Consensus 192 cp~~W~~g~~~~~~~~~~ 209 (221)
T 2c0d_A 192 CPINWKKGQKAFKPTTES 209 (221)
T ss_dssp CC----------------
T ss_pred CCCCCCCCCccccCCcHH
Confidence 999999999999765444
No 113
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.68 E-value=1.2e-16 Score=125.08 Aligned_cols=98 Identities=10% Similarity=0.082 Sum_probs=86.4
Q ss_pred CCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHHHHHHH
Q psy1172 157 ALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHDWIKAL 235 (276)
Q Consensus 157 ~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~~~~~ 235 (276)
..+|+|++++.+|+.++++ +++||+++|+|| ++||++|..+++.|+++++++. ++.+++|+.|+ ++..++|.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~-~~~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGA-SLQGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGG-GGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHH-HhCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 3589999999999999999 889999999999 9999999999999999999986 89999999986 78888888888
Q ss_pred HhcccCCeeEEEeeCCcchhhhhhhhcccccc
Q psy1172 236 VRDCILGLLINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 236 ~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+++|+++.|.+.. +++.||+..-
T Consensus 78 ------~~~~~~~~d~~~~---~~~~~~i~~~ 100 (136)
T 1lu4_A 78 ------NLNFTNLNDADGV---IWARYNVPWQ 100 (136)
T ss_dssp ------TCCSEEEECTTSH---HHHHTTCCSS
T ss_pred ------CCCceEEECCchh---HHHhcCCCCC
Confidence 7789999986544 5777887543
No 114
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.68 E-value=7.9e-17 Score=138.85 Aligned_cols=91 Identities=32% Similarity=0.576 Sum_probs=81.7
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
.+++||+++|+++++++.||+..... |+ ..|++||||++|+|++.+..+...+++++++++.|++||.++++++
T Consensus 131 ~~~~~~~l~D~~~~~~~~ygv~~~~~----g~--~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~~ 204 (222)
T 3ztl_A 131 GHMKIPLLADRKQEISKAYGVFDEED----GN--AFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGE 204 (222)
T ss_dssp CSCSSCEEECSSSHHHHHTTCBCTTT----SS--BCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHSC
T ss_pred cccceeEEeCCchHHHHHcCCeecCC----CC--ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhhcccccCc
Confidence 47999999999999999999975542 43 4689999999999999999888899999999999999999999999
Q ss_pred CcCCCCCCCCceeeCCC
Q psy1172 97 ATPVDWKVGMEIEVRPG 113 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p~ 113 (276)
.||+||+||++++.||+
T Consensus 205 ~c~~~w~~~~~~~~~~~ 221 (222)
T 3ztl_A 205 VCPVNWKRGQHGIKVNQ 221 (222)
T ss_dssp BBCTTCCTTSCCBCC--
T ss_pred cCCcCcCCCCccccCCC
Confidence 99999999999998875
No 115
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.67 E-value=1.5e-16 Score=124.13 Aligned_cols=99 Identities=12% Similarity=0.073 Sum_probs=86.1
Q ss_pred cCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHHHHHH
Q psy1172 156 AALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHDWIKA 234 (276)
Q Consensus 156 G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~~~~ 234 (276)
|..+|+|++++.+|+.++++ +++||+++|+|| ++|||+|..+++.|+++++++. ++.+++|+.|+ .+..++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~-~~~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGE-SLLGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGG-GGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHH-HhCCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 67799999999999999999 789999999999 9999999999999999999986 89999999974 7777888877
Q ss_pred HHhcccCCe-eEEEeeCCcchhhhhhhhcccccc
Q psy1172 235 LVRDCILGL-LINLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 235 ~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
+ ++ +|+++.|.+. .+++.||+..-
T Consensus 78 ~------~~~~~~~~~d~~~---~~~~~~~i~~~ 102 (136)
T 1zzo_A 78 Y------PVKTFTQLADTDG---SVWANFGVTQQ 102 (136)
T ss_dssp T------TCTTSEEEECTTC---HHHHHTTCCSS
T ss_pred c------CCCceEEEEcCCc---HHHHHcCCCCC
Confidence 7 77 8999988654 35777887543
No 116
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.66 E-value=9.5e-17 Score=128.27 Aligned_cols=101 Identities=14% Similarity=0.255 Sum_probs=79.4
Q ss_pred cccCCCCC-cEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh-CCcEEEEEeCCC-hHHHHH
Q psy1172 154 FAAALLPG-CSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ-RTCKVIALSCDS-VESHHD 230 (276)
Q Consensus 154 ~~G~~aPd-F~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~-~gv~Vv~VS~D~-~~~~~~ 230 (276)
.+|+.+|+ |+|++.+| .++++ +++||++||+|| ++|||+|+.++|.|++++++|++ .+++|++||+|. .+..++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~-~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVK-SLAGKLVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGG-GGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHH-HhCCCEEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 36899999 99999999 99999 899999999999 99999999999999999999984 789999999984 455555
Q ss_pred HHHHHHhcccCC-eeEEEeeCCcchhhhhhhhcccc
Q psy1172 231 WIKALVRDCILG-LLINLSVDDFKEVEGRSRRFQES 265 (276)
Q Consensus 231 ~~~~~~~~~~~~-~~~~~l~D~~~~~~~~a~~ygv~ 265 (276)
|.+++ + ..++++.. .....+++.||+.
T Consensus 80 ~~~~~------~~~~~~~~~~--d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 80 YFAKM------PWLAVPFAQS--EAVQKLSKHFNVE 107 (146)
T ss_dssp HHTTC------SSEECCGGGH--HHHHHHHHHTTCC
T ss_pred HHHHC------Cceeeccchh--hHHHHHHHHhCCC
Confidence 54443 3 23444421 1223457778774
No 117
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.66 E-value=2e-16 Score=129.11 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=84.1
Q ss_pred ccccccCCCCCcEEecC--CCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHH
Q psy1172 151 IDRFAAALLPGCSLLGC--QASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVES 227 (276)
Q Consensus 151 ~~~~~G~~aPdF~L~~~--~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~ 227 (276)
..+.+|+.+|+|+|++. +|+.+++++.++||++||+|| ++|||+|+.++|.|++++++ ++.|++|+.| +++.
T Consensus 20 ~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~ 94 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQK 94 (168)
T ss_dssp CCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHH
T ss_pred cccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHH
Confidence 34568999999999999 899998883359999999999 99999999999999988765 8999999975 5677
Q ss_pred HHHHHHHHHhcccCCeeEE-EeeCCcchhhhhhhhccccccc
Q psy1172 228 HHDWIKALVRDCILGLLIN-LSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.++|.+++ +++|+ ++.|... .+++.||+..-+
T Consensus 95 ~~~~~~~~------~~~~~~~~~d~~~---~~~~~~~v~~~P 127 (168)
T 2b1k_A 95 AISWLKEL------GNPYALSLFDGDG---MLGLDLGVYGAP 127 (168)
T ss_dssp HHHHHHHH------CCCCSEEEEETTC---HHHHHHTCCSSS
T ss_pred HHHHHHHc------CCCCceeeECcch---HHHHHcCccccC
Confidence 88888887 66666 4556543 457788876443
No 118
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.64 E-value=6.2e-17 Score=132.92 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=81.2
Q ss_pred cccccCCCCCc-EEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh-CCcEEEEEeCCCh-HHH
Q psy1172 152 DRFAAALLPGC-SLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ-RTCKVIALSCDSV-ESH 228 (276)
Q Consensus 152 ~~~~G~~aPdF-~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~-~gv~Vv~VS~D~~-~~~ 228 (276)
+..+|+.+|+| +|++.+| .++|+ +++||++||+|| ++|||+|+.++|.|++++++|++ +++.||+|++|.. +..
T Consensus 21 ~~~vG~~~P~f~~l~~~~g-~v~l~-~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~ 97 (165)
T 3s9f_A 21 MSGVAKHLGEALKLRKQAD-TADMD-SLSGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDF 97 (165)
T ss_dssp -CHHHHHHHHTSCEEETTE-EECSG-GGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHH
T ss_pred hhhhcccCCcceeeecCCC-cccHH-HcCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHH
Confidence 44689999999 9999999 99999 899999999999 99999999999999999999986 7899999999854 444
Q ss_pred HHHHHHHHhcccCC-eeEEEeeCCcchhhhhhhhccccc
Q psy1172 229 HDWIKALVRDCILG-LLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 229 ~~~~~~~~~~~~~~-~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
++|.+++ + ..+++.. +.....+++.||+..
T Consensus 98 ~~~~~~~------~~~~~~~~~--~~~~~~l~~~~~v~~ 128 (165)
T 3s9f_A 98 NAYYAKM------PWLSIPFAN--RNIVEALTKKYSVES 128 (165)
T ss_dssp HHHHTTC------SSEECCTTC--HHHHHHHHHHTTCCS
T ss_pred HHHHHhC------CCcccccCc--hhHHHHHHHHcCCCC
Confidence 4444433 2 2344332 222245688888753
No 119
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.64 E-value=3.1e-16 Score=122.11 Aligned_cols=99 Identities=15% Similarity=0.174 Sum_probs=80.8
Q ss_pred CCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe------CCChHHHHHH
Q psy1172 158 LLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS------CDSVESHHDW 231 (276)
Q Consensus 158 ~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS------~D~~~~~~~~ 231 (276)
++|+|++++.+|+.++++ +++||++||+|| ++|||+|..+++.|+++++++ ..++.+++|+ .++.+..++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~-~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLS-DYKGKKVYLKFW-ASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGG-GGTTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHH-HhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 489999999999999999 899999999999 999999999999999999984 5679999993 3445555555
Q ss_pred HHHHHhcccCCe-eEEEeeCCcchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGL-LINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~-~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.+.+ ++ .++++.|.+.. +++.||+..-+
T Consensus 78 ~~~~------~~~~~~~~~d~~~~---~~~~~~v~~~P 106 (138)
T 4evm_A 78 YKGL------DYKNLPVLVDPSGK---LLETYGVRSYP 106 (138)
T ss_dssp HTTC------CCTTCCEEECTTCH---HHHHTTCCSSS
T ss_pred Hhhc------CCCCeeEEECcchH---HHHHcCcccCC
Confidence 5555 66 78999886553 67788875433
No 120
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.63 E-value=3.8e-16 Score=124.05 Aligned_cols=102 Identities=20% Similarity=0.272 Sum_probs=78.7
Q ss_pred cccCCCCCc-EEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHH-hCCcEEEEEeCCC-hHHHHH
Q psy1172 154 FAAALLPGC-SLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFE-QRTCKVIALSCDS-VESHHD 230 (276)
Q Consensus 154 ~~G~~aPdF-~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~-~~gv~Vv~VS~D~-~~~~~~ 230 (276)
.+|+.+|+| +|++.+| .++++ +++||++||+|| ++|||+|+.++|.|++++++++ +.+++|++|+.|. .+..++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~-~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLG-SLVGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSG-GGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHH-HhCCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 478999998 9999999 99999 899999999999 9999999999999999999998 4789999999985 344444
Q ss_pred HHHHHHhcccCC-eeEEEeeCCcchhhhhhhhccccc
Q psy1172 231 WIKALVRDCILG-LLINLSVDDFKEVEGRSRRFQESL 266 (276)
Q Consensus 231 ~~~~~~~~~~~~-~~~~~l~D~~~~~~~~a~~ygv~~ 266 (276)
+.+++ + ..+++.. ......+++.||+..
T Consensus 80 ~~~~~------~~~~~~~~~--~~~~~~~~~~~~v~~ 108 (144)
T 1o73_A 80 YYGKM------PWLALPFDQ--RSTVSELGKTFGVES 108 (144)
T ss_dssp HHTTC------SSEECCTTC--HHHHHHHHHHHTCCS
T ss_pred HHHhC------CceEeeccc--hhHHHHHHHHcCCCC
Confidence 44333 2 2333332 112334577787743
No 121
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.62 E-value=3.1e-16 Score=125.85 Aligned_cols=103 Identities=10% Similarity=0.114 Sum_probs=82.4
Q ss_pred cccccCCCCCcEEecCCC--------CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 152 DRFAAALLPGCSLLGCQA--------SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 152 ~~~~G~~aPdF~L~~~~G--------~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
.+.+|+.+|+|++++.+| +.++++ +++||++||+|| ++|||+|..+++.|++++++ .++.+++|+.|
T Consensus 7 ~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~-~~~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~ 81 (156)
T 1kng_A 7 SALIGRPAPQTALPPLEGLQADNVQVPGLDPA-AFKGKVSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGINYK 81 (156)
T ss_dssp -----CBCCCCCBCCCTTCEETTEECCCBCGG-GGTTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES
T ss_pred hHHhCCCCCCceeeeccCcccccccCceechH-HhCCCEEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEECC
Confidence 457899999999999999 899999 889999999999 99999999999999998776 45999999975
Q ss_pred -ChHHHHHHHHHHHhcccCCeeEE-EeeCCcchhhhhhhhccccccc
Q psy1172 224 -SVESHHDWIKALVRDCILGLLIN-LSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
+.+..++|.+.+ +++|+ +..|... .+++.||+..-+
T Consensus 82 ~~~~~~~~~~~~~------~~~~~~~~~d~~~---~~~~~~~v~~~P 119 (156)
T 1kng_A 82 DAADNARRFLGRY------GNPFGRVGVDANG---RASIEWGVYGVP 119 (156)
T ss_dssp CCHHHHHHHHHHH------CCCCSEEEEETTS---HHHHHTTCCSSC
T ss_pred CCHHHHHHHHHHc------CCCCceeeeCchh---HHHHhcCcCccC
Confidence 567788888888 67777 6667543 467788875443
No 122
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.41 E-value=3.7e-17 Score=129.48 Aligned_cols=104 Identities=10% Similarity=0.046 Sum_probs=80.3
Q ss_pred CCCCCcEEecCCCCeEEeccc-CCCC-eEEEEEEcCCCCcccHHHHHHHHHHHHHHH--hCCcEEEEEeCC-ChHHHHHH
Q psy1172 157 ALLPGCSLLGCQASLVILECS-IPAF-WGILFSHPSDFTPVCTTELARVLQLIKEFE--QRTCKVIALSCD-SVESHHDW 231 (276)
Q Consensus 157 ~~aPdF~L~~~~G~~v~l~~~-~~gk-~vvL~f~pa~~cp~C~~el~~l~~~~~~~~--~~gv~Vv~VS~D-~~~~~~~~ 231 (276)
+.+|+|+|++.+|+.++++ + ++|| ++||+|| ++|||+|+.++|.|++++++|+ ..++.|++||.| +++..++|
T Consensus 2 ~~~p~~~l~~~~g~~~~l~-~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~ 79 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNAN-EALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQY 79 (143)
Confidence 4689999999999999999 6 9999 9999999 9999999999999999999995 358999999998 45566667
Q ss_pred HHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 232 IKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
.+++ +++++.+.........+++.||+..-+
T Consensus 80 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~P 110 (143)
T 2lus_A 80 MMES------HGDWLAIPYRSGPASNVTAKYGITGIP 110 (143)
Confidence 6666 445443322121223467788875433
No 123
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.57 E-value=2.2e-15 Score=126.89 Aligned_cols=90 Identities=27% Similarity=0.477 Sum_probs=68.3
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
++++||+++|++++++++||+..+. |. ..+++||||++|+|++.+..+...+++.+++++.|++|+...++++
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~~-----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~ 167 (198)
T 1zof_A 95 GQVSFPMVADITKSISRDYDVLFEE-----AI--ALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGE 167 (198)
T ss_dssp CCCSSCEEECTTSHHHHHTTCEETT-----TE--ECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHHHSSCC
T ss_pred cCceeEEEECCchHHHHHhCCcccC-----Cc--ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCC
Confidence 6799999999999999999997532 32 4689999999999999998888888899999999999999999999
Q ss_pred CcCCCCCCCCceeeCCC
Q psy1172 97 ATPVDWKVGMEIEVRPG 113 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p~ 113 (276)
.||+||++|++++++.+
T Consensus 168 ~~p~~w~~~~~~~~~~~ 184 (198)
T 1zof_A 168 VCPAGWRKGDKGMKATH 184 (198)
T ss_dssp CCC--------------
T ss_pred ccCCcCcCCCccccCCc
Confidence 99999999999997764
No 124
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.55 E-value=7.8e-16 Score=124.69 Aligned_cols=103 Identities=8% Similarity=0.095 Sum_probs=79.7
Q ss_pred ccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC---hHHHHHH
Q psy1172 155 AAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS---VESHHDW 231 (276)
Q Consensus 155 ~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~---~~~~~~~ 231 (276)
+|+.+| +|++.+|+.++++ +++||++||+|| ++|||+|+.++|.|++++++|+..+++||+|+.|. ....+++
T Consensus 16 ~~~~~p--~l~~~~g~~~~~~-~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~ 91 (164)
T 2h30_A 16 VPHTMS--TMKTADNRPASVY-LKKDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEF 91 (164)
T ss_dssp HHHHHT--TCEETTSSBGGGG-CCTTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHH
T ss_pred cCCcCC--ccCCCCCCEeeHH-HhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHH
Confidence 566666 7889999999998 899999999999 99999999999999999999999999999999853 1222333
Q ss_pred HHHHHhcccCCee-EEEeeCCcchhhhhhhhcccccc
Q psy1172 232 IKALVRDCILGLL-INLSVDDFKEVEGRSRRFQESLN 267 (276)
Q Consensus 232 ~~~~~~~~~~~~~-~~~l~D~~~~~~~~a~~ygv~~~ 267 (276)
.+...+. +++ +++..|... .+++.||+..-
T Consensus 92 ~~~~~~~---~~~~~~~~~d~~~---~~~~~~~v~~~ 122 (164)
T 2h30_A 92 QKWYAGL---NYPKLPVVTDNGG---TIAQNLNISVY 122 (164)
T ss_dssp HHHHTTS---CCTTSCEEECTTC---HHHHHTTCCSS
T ss_pred HHHHHhC---CCCcceEEEcCch---HHHHHcCCCcc
Confidence 3333222 455 778877544 46778887543
No 125
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.55 E-value=4.4e-15 Score=123.84 Aligned_cols=89 Identities=21% Similarity=0.407 Sum_probs=66.6
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccC-CC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTK-KV 96 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~-~~ 96 (276)
+++||+++|+++++++.||+..... |. ..|++||||++|+|++.+..+...+++.+++++.|++|+..+++ ++
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~ 164 (187)
T 1we0_A 91 SIEYIMIGDPSQTISRQFDVLNEET----GL--ADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGE 164 (187)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHHHHTSTTC
T ss_pred CCCceEEECCchHHHHHhCCCcCCC----Cc--eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhhCCCc
Confidence 5999999999999999999875432 32 46899999999999999998888888999999999999988888 89
Q ss_pred CcCCCCCCCCceeeCC
Q psy1172 97 ATPVDWKVGMEIEVRP 112 (276)
Q Consensus 97 ~~p~~w~~g~~~~~~p 112 (276)
+||+||++|++||.++
T Consensus 165 ~~p~~w~~~~~~~~~~ 180 (187)
T 1we0_A 165 VCPAKWEEGGETLKPS 180 (187)
T ss_dssp CC--------------
T ss_pred ccccccccCCceeecC
Confidence 9999999999999765
No 126
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.40 E-value=3.6e-13 Score=110.55 Aligned_cols=71 Identities=20% Similarity=0.398 Sum_probs=59.2
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCC-CHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR-NFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r-~~~eilr~l~~lq 89 (276)
++++||+|+|++++++++||++.+...+..+ .+.|+|||||++|+|++++.++...+| +++|+|+.|++|.
T Consensus 88 ~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~--~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 88 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKM--VAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEEEETTEEE--EECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred cCcccceeecCchHHHHHcCCcccccccCcC--CeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 5599999999999999999998654322112 367999999999999999998777666 8999999999885
No 127
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.37 E-value=1.2e-12 Score=109.78 Aligned_cols=83 Identities=34% Similarity=0.650 Sum_probs=58.4
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
+++||+++|+++++++.||+... . |. ..+++||||++|+|++.+..+.+.+++.+++++.|++|+. +..
T Consensus 105 ~~~~~~~~d~~~~~~~~~~v~~~-~----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~----~~~ 173 (195)
T 2bmx_A 105 TLPFPMLSDIKRELSQAAGVLNA-D----GV--ADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DEL 173 (195)
T ss_dssp GCCSCEEECTTSHHHHHHTCBCT-T----SS--BCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC-------
T ss_pred CCceeEEeCCchHHHHHhCCccc-C----CC--ccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh----CCC
Confidence 69999999999999999999754 1 33 4589999999999999999888888899999999999985 679
Q ss_pred cCCCCCCCCceeeC
Q psy1172 98 TPVDWKVGMEIEVR 111 (276)
Q Consensus 98 ~p~~w~~g~~~~~~ 111 (276)
||++|++|++++++
T Consensus 174 ~p~~w~~~~~~~~~ 187 (195)
T 2bmx_A 174 CASNWRKGDPTLDA 187 (195)
T ss_dssp --------------
T ss_pred cCcccccCCcccCC
Confidence 99999999999855
No 128
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.35 E-value=2.6e-12 Score=104.47 Aligned_cols=72 Identities=31% Similarity=0.463 Sum_probs=58.9
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCC-CHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR-NFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r-~~~eilr~l~~lq 89 (276)
++++||+|+|++++++++||+...... ..|..++.|+|||||++|+|++++.++...++ +++||+++|++|.
T Consensus 85 ~~~~~p~l~D~~~~v~~~ygv~~~~~~-~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~Ls 157 (157)
T 4g2e_A 85 NKLNFTILSDYNREVVKKYNVAWEFPA-LPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS 157 (157)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEECTT-STTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHTC
T ss_pred cCCcEEEEEcCCcHHHHHcCCcccccc-CCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHhC
Confidence 559999999999999999999754321 11333468999999999999999998776665 8999999999883
No 129
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.34 E-value=4.7e-12 Score=106.63 Aligned_cols=112 Identities=17% Similarity=0.267 Sum_probs=87.0
Q ss_pred cccccCCCCC--cEEe-------cCC----C--CeEEecccC-CCCeEEEEEEcCCCCcccHH-HHHHHHHHHHHH-HhC
Q psy1172 152 DRFAAALLPG--CSLL-------GCQ----A--SLVILECSI-PAFWGILFSHPSDFTPVCTT-ELARVLQLIKEF-EQR 213 (276)
Q Consensus 152 ~~~~G~~aPd--F~L~-------~~~----G--~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~-el~~l~~~~~~~-~~~ 213 (276)
...+|+++|. +++. +.+ | +++++++.+ +||+|||+++|++|+|+|.. ++|.+.+.++++ +.+
T Consensus 25 ~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~k 104 (199)
T 4h86_A 25 SDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEK 104 (199)
T ss_dssp CTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHS
T ss_pred HHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhc
Confidence 4468999995 5432 111 2 357777555 69999999999999999987 599999999876 789
Q ss_pred Cc-EEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCcchhhhhhhhccccccc
Q psy1172 214 TC-KVIALSCDSVESHHDWIKALVRDCILGLLINLSVDDFKEVEGRSRRFQESLNT 268 (276)
Q Consensus 214 gv-~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~a~~ygv~~~~ 268 (276)
|+ +|++||+|+++.+++|.+.+..+. ...+++++|..+ +++++||+..+.
T Consensus 105 Gvd~I~ciSVND~FVm~AW~k~~~~~~--~~~i~~laD~~~---eftkalGl~~~~ 155 (199)
T 4h86_A 105 EVDQVIVVTVDNPFANQAWAKSLGVKD--TTHIKFASDPGC---AFTKSIGFELAV 155 (199)
T ss_dssp CCCEEEEEESSCHHHHHHHHHHTTCCC--CSSEEEEECGGG---HHHHHTTCEEEE
T ss_pred CCcEEEEEEcCCHHHHHHHHHHhcccc--cccccccCCcch---HHHHhcCceeec
Confidence 98 799999999999999999883221 236899999554 578899986653
No 130
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.24 E-value=1.2e-11 Score=102.65 Aligned_cols=70 Identities=14% Similarity=0.123 Sum_probs=57.6
Q ss_pred CCC--ceEEEeCccHHHHHhCCCCCCCC-CCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLP--YPIIADQDRSLAVQLGMLDPVEK-DSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~--fpllsD~~~~va~~yG~~~~~~~-~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+++ ||+|+|++++++++||+..++.. +..|...+.|+||||| ||+|++++.++..+||+++|+.++|++|
T Consensus 101 ~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 101 KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 466 99999999999999999865320 0012123679999999 9999999999999999999999999875
No 131
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.09 E-value=1.7e-10 Score=96.47 Aligned_cols=69 Identities=19% Similarity=0.145 Sum_probs=54.5
Q ss_pred CC-CceEEEeCccHHHHHhCCCCCCCCCCCCCC-cccceEEEECCCCcEEEEEecCCCC---------CCCHHHHHHHHH
Q psy1172 18 KL-PYPIIADQDRSLAVQLGMLDPVEKDSKGMP-LTCRAVFIIDPAKKLRLSFLYPATT---------GRNFDEILRVLD 86 (276)
Q Consensus 18 ~l-~fpllsD~~~~va~~yG~~~~~~~~~~g~~-~~~R~tfiIdp~g~I~~~~~~~~~~---------~r~~~eilr~l~ 86 (276)
++ +||||||++++++++|||+.+... .|+. .+.|+||||| +|+|++++.++... .+|++++|+.|+
T Consensus 102 ~~~~f~lLsD~~~~~a~~yGv~~~~~~--~G~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~ 178 (182)
T 1xiy_A 102 DIKKIKYISDGNSSFTDSMNMLVDKSN--FFMGMRPWRFVAIVE-NNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLK 178 (182)
T ss_dssp TCCSSEEEECTTSHHHHHTTCEEECGG--GTCCEEECCEEEEEE-TTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHH
T ss_pred CCCCceEEEeCchHHHHHhCCceeccc--cCCCCceEEEEEEEc-CCEEEEEEEeCCcccccccCcccCCCHHHHHHHHH
Confidence 35 799999999999999999854321 1321 2579999999 99999999987544 379999999998
Q ss_pred hhc
Q psy1172 87 SLQ 89 (276)
Q Consensus 87 ~lq 89 (276)
+.+
T Consensus 179 ~~~ 181 (182)
T 1xiy_A 179 NNQ 181 (182)
T ss_dssp CC-
T ss_pred hcc
Confidence 654
No 132
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.04 E-value=6.2e-10 Score=95.98 Aligned_cols=70 Identities=21% Similarity=0.266 Sum_probs=57.2
Q ss_pred CC-CceEEEeC-ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCC-CCHHHHHHHHHhhcc
Q psy1172 18 KL-PYPIIADQ-DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTG-RNFDEILRVLDSLQL 90 (276)
Q Consensus 18 ~l-~fpllsD~-~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~-r~~~eilr~l~~lq~ 90 (276)
++ +||+|+|+ +++++++||+..+... ..|+ +.|+|||||++|+|++++..+...+ +++++++++|++|+.
T Consensus 104 gl~~fplLsD~~~~~vak~yGv~~~~~~-~~G~--~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 104 GLPNIALLSTLRGRDFHKRYGVLITEYP-LSGY--TSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp CCTTCEEEESTTCTTHHHHTTCBCCSTT-STTC--BCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCceEEEcCCchHHHHHhCCcccccc-ccCC--ccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 47 69999998 7999999999864311 1243 6799999999999999999775554 699999999999863
No 133
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.04 E-value=7.8e-11 Score=92.78 Aligned_cols=95 Identities=14% Similarity=0.016 Sum_probs=68.4
Q ss_pred cccCCCCCcE-EecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCCh-HHH
Q psy1172 154 FAAALLPGCS-LLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDSV-ESH 228 (276)
Q Consensus 154 ~~G~~aPdF~-L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~~-~~~ 228 (276)
..|..+|+|+ +.+.++....++ +.+||++||+|| ++||++|+...+.+ .++.+++. ++.++.|+.+.. ...
T Consensus 5 ~~~~~~~~f~~~~~~~~~~~~l~-~~~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~ 80 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDELNQALV-EAKGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQD 80 (134)
T ss_dssp -----CCCCEECCSHHHHHHHHH-HHTTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHHH
T ss_pred cccccCCCcEEecCHHHHHHHHH-HhcCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcchH
Confidence 4688899998 666666666676 667999999999 99999999999988 88888874 599999998653 444
Q ss_pred HHHHHHHHhcccCCeeEEEeeCCcchh
Q psy1172 229 HDWIKALVRDCILGLLINLSVDDFKEV 255 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~D~~~~~ 255 (276)
....+++.- .+++..++.|.++..
T Consensus 81 ~~l~~~~~v---~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 81 VALLKHLNV---LGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHTTC---CSSSEEEEECTTSCB
T ss_pred HHHHHHcCC---CCCCEEEEECCCCCE
Confidence 556666621 245777777776653
No 134
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.96 E-value=5.5e-10 Score=92.85 Aligned_cols=67 Identities=16% Similarity=0.273 Sum_probs=49.5
Q ss_pred CCC--ceEEEeCccHHHHHhCCCCCCCCCCCCCCc-ccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLP--YPIIADQDRSLAVQLGMLDPVEKDSKGMPL-TCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~--fpllsD~~~~va~~yG~~~~~~~~~~g~~~-~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+++ ||||||++++++++||+..+... .|+.. +.|+|||| +||+|++++.++ ..+++.+++.++|++|
T Consensus 105 ~l~~~f~lLsD~~~~va~ayGv~~~~~~--~G~g~~s~R~tfII-~dG~I~~~~~~~-~~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 105 HTAGKVRMMADGSAAFTHALGLTQDLSA--RGMGIRSLRYAMVI-DGGVVKTLAVEA-PGKFEVSDAASVLATL 174 (176)
T ss_dssp TCTTTSEEEECTTCHHHHHHTCEEECGG--GTCCEEECCEEEEE-ETTEEEEEEECC-TTCCSSSSHHHHHHTC
T ss_pred CCCCCceEEEcCchHHHHHhCCCccccc--cCCCcccccEEEEE-cCCEEEEEEEcC-CCCcchhhHHHHHHHh
Confidence 466 99999999999999999865321 14321 57999999 999999999987 3345555555555544
No 135
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.94 E-value=1.3e-09 Score=90.10 Aligned_cols=72 Identities=15% Similarity=0.312 Sum_probs=57.2
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||+++|++++++++||+...............|++||||++|+|++++ ++....++++|+++.|++|+
T Consensus 106 ~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~-~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 106 QGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW-RQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp HTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE-CSCCSTTHHHHHHHHHHHHH
T ss_pred cCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE-cCCCCCCCHHHHHHHHHHHh
Confidence 4599999999999999999997543211001111369999999999999999 57788899999999999987
No 136
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.92 E-value=2.6e-09 Score=86.37 Aligned_cols=75 Identities=20% Similarity=0.342 Sum_probs=61.1
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
.+++||+++|.++++++.||+.. ...+.+++||||++|+|++.+..+.....+++++++.|++||..++...
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~v~~--------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~~ 155 (161)
T 3drn_A 84 YKLPFILVSDPDKKIRELYGAKG--------FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIKEEEISLE 155 (161)
T ss_dssp TTCCSEEEECTTSHHHHHTTCCC--------SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHHHHHHC--
T ss_pred hCCCceEEECCcHHHHHHcCCCC--------cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhhhhhcchh
Confidence 45899999999999999999962 1225689999999999999999777888899999999999998777665
Q ss_pred CcC
Q psy1172 97 ATP 99 (276)
Q Consensus 97 ~~p 99 (276)
.+|
T Consensus 156 ~~~ 158 (161)
T 3drn_A 156 HHH 158 (161)
T ss_dssp ---
T ss_pred hcc
Confidence 544
No 137
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.87 E-value=9e-10 Score=85.22 Aligned_cols=89 Identities=11% Similarity=0.010 Sum_probs=64.5
Q ss_pred CCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe--CCChHHHHHHHHH
Q psy1172 157 ALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS--CDSVESHHDWIKA 234 (276)
Q Consensus 157 ~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS--~D~~~~~~~~~~~ 234 (276)
+.+++++..+.+|...... ..+|+++||.|| ++||++|+...|.|.+++++++ .++.++.|+ .|.. ....++
T Consensus 4 ~~~~~l~~~~~~~~~~~~~-~~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~~---~~~~~~ 77 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEE-AKEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEKN---IDLAYK 77 (126)
T ss_dssp CCSSCTTTTCCSEESSTTT-CCSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSHH---HHHHHH
T ss_pred cccCCCCccccchhHHHHH-HhCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCch---HHHHHH
Confidence 4567777777776554444 567899999999 9999999999999999999986 679999999 6532 234455
Q ss_pred HHhcccCCeeEEEeeCCcch
Q psy1172 235 LVRDCILGLLINLSVDDFKE 254 (276)
Q Consensus 235 ~~~~~~~~~~~~~l~D~~~~ 254 (276)
+.- .+++..++.|.++.
T Consensus 78 ~~v---~~~Pt~~~~~~~G~ 94 (126)
T 2l57_A 78 YDA---NIVPTTVFLDKEGN 94 (126)
T ss_dssp TTC---CSSSEEEEECTTCC
T ss_pred cCC---cceeEEEEECCCCC
Confidence 521 14566667665444
No 138
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.86 E-value=1.1e-09 Score=88.47 Aligned_cols=99 Identities=11% Similarity=-0.054 Sum_probs=68.0
Q ss_pred CCcccccccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCC
Q psy1172 148 GGLIDRFAAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 148 ~~~~~~~~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
++......+...++| +..|+.+.++ .++||+++|+||.++|||+|+.++|.| .++.+.+ ..++.++.|+.+.
T Consensus 19 ~~~~l~~~~~~~~~~---~~~~~~~~~a-~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~ 93 (154)
T 2ju5_A 19 NLQQTRPIAAANLQW---ESYAEALEHS-KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQ 93 (154)
T ss_dssp CSSCCCSSCCCCCCE---ECHHHHHHHH-HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCS
T ss_pred cchhhhhcccCCCCC---CCHHHHHHHH-HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCcc
Confidence 333334566667777 3345667777 678999999999889999999999999 6665444 3568899998875
Q ss_pred h--------HHHHHHHHHHHhcccCCeeEEEeeCCcch
Q psy1172 225 V--------ESHHDWIKALVRDCILGLLINLSVDDFKE 254 (276)
Q Consensus 225 ~--------~~~~~~~~~~~~~~~~~~~~~~l~D~~~~ 254 (276)
. ....+..+.+.- .++|..++.|.++.
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~v---~~~Pt~~~~d~~G~ 128 (154)
T 2ju5_A 94 KNHQPEEQRQKNQELKAQYKV---TGFPELVFIDAEGK 128 (154)
T ss_dssp SCCCCHHHHHHHHHHHHHTTC---CSSSEEEEECTTCC
T ss_pred ccCCChhhHhhHHHHHHHcCC---CCCCEEEEEcCCCC
Confidence 3 233445555521 24677777776664
No 139
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=98.86 E-value=1.6e-09 Score=89.59 Aligned_cols=64 Identities=20% Similarity=0.105 Sum_probs=46.2
Q ss_pred CceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCC---CHHHHHHHH
Q psy1172 20 PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR---NFDEILRVL 85 (276)
Q Consensus 20 ~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r---~~~eilr~l 85 (276)
+||||||++++++++|||+.+......|. .+.|+||||| ||+|++++.++...+. +.++||+.|
T Consensus 103 ~f~lLSD~~~~~a~ayGv~~~~~~~g~g~-~~~R~tfvId-dG~V~~~~v~~~~~~~~~s~a~~vL~~~ 169 (171)
T 2xhf_A 103 KIRMLADMHGEFTRALGTELDSSKMLGNN-RSRRYAMLID-DNKIRSVSTEPDITGLACLLSIQRQKEN 169 (171)
T ss_dssp CSEEEECTTSHHHHHHTCBCCCHHHHSSC-CBCCEEEEEE-TTEEEEEEETTSCSHHHHHHHHHHC---
T ss_pred CeEEEEeCCchHHHHhCCceeccccCCCc-ceEEEEEEEe-CCEEEEEEEeCCCCcccCCCHHHHHHHh
Confidence 89999999999999999986542100022 3689999999 9999999998766533 355655544
No 140
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.82 E-value=3.8e-09 Score=85.22 Aligned_cols=72 Identities=15% Similarity=0.318 Sum_probs=56.9
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||+++|++++++++||+...............|++||||++|+|++++ ++.....+.+++++.|++|+
T Consensus 90 ~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 90 QGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW-RKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp HCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE-CSCCSTTHHHHHHHHHHHHC
T ss_pred hCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE-cCCCcccCHHHHHHHHHHHh
Confidence 4589999999999999999997532210000000268999999999999999 67888889999999999986
No 141
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.77 E-value=9.5e-09 Score=80.83 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=62.3
Q ss_pred EecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCe
Q psy1172 164 LLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGL 243 (276)
Q Consensus 164 L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~ 243 (276)
+.+.+|....++ .++|+++||.|| +.||++|+..+|.|.++++++.+ .+.++.|+.|... ...+++.- .++
T Consensus 36 l~~~~~~~~~l~-~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~v---~~~ 106 (141)
T 3hxs_A 36 IADYENHSKEWK-YLGDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEP---ELARDFGI---QSI 106 (141)
T ss_dssp TCCCSSCCCCCC-CCCSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---HHHHHTTC---CSS
T ss_pred hhccccchhHHH-HhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCH---HHHHHcCC---CCc
Confidence 455677778887 789999999999 99999999999999999999864 4899999998643 33455521 145
Q ss_pred eEEEeeCCcch
Q psy1172 244 LINLSVDDFKE 254 (276)
Q Consensus 244 ~~~~l~D~~~~ 254 (276)
|.-++.+.++.
T Consensus 107 Pt~~~~~~~g~ 117 (141)
T 3hxs_A 107 PTIWFVPMKGE 117 (141)
T ss_dssp SEEEEECSSSC
T ss_pred CEEEEEeCCCC
Confidence 66666665544
No 142
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.76 E-value=2.5e-08 Score=81.08 Aligned_cols=66 Identities=23% Similarity=0.328 Sum_probs=54.3
Q ss_pred CCC-CceEEEeC-ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecC-CCCCCCHHHHHHHHHhh
Q psy1172 17 GKL-PYPIIADQ-DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP-ATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l-~fpllsD~-~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~-~~~~r~~~eilr~l~~l 88 (276)
+++ +||+++|+ +++++++||+..... |. +.|++||||++|+|++++..+ .....+.+++++.|++|
T Consensus 98 ~~~~~~~~l~D~~~~~~~~~~gv~~~~~----g~--~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 98 AGLDNVITLSDHRDLSFGENYGVVMEEL----RL--LARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp HTCSSCEEEECTTTCHHHHHHTCEETTT----TE--ECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred cCCCceEEccCCchhHHHHHhCCccccC----Cc--eeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 348 89999999 999999999975432 33 469999999999999998755 44567899999999864
No 143
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.76 E-value=9e-09 Score=79.97 Aligned_cols=73 Identities=11% Similarity=0.168 Sum_probs=53.2
Q ss_pred ccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHH
Q psy1172 155 AAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKA 234 (276)
Q Consensus 155 ~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~ 234 (276)
...++|+|+ ..+++.+... ..+||+++|.|| ++||++|+..+|.|+++++++++ ++.++.|+.|... ...++
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~-~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~---~l~~~ 91 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGV-NMKNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNE---SLARK 91 (128)
T ss_dssp ------CCC--CCCCSSSSBT-TSCCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCH---HHHHH
T ss_pred HhccCCccc--cCCccHHHHH-HccCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCH---HHHHH
Confidence 445678776 4455556665 678999999999 99999999999999999999963 5899999887543 34455
Q ss_pred H
Q psy1172 235 L 235 (276)
Q Consensus 235 ~ 235 (276)
+
T Consensus 92 ~ 92 (128)
T 3ul3_B 92 F 92 (128)
T ss_dssp T
T ss_pred c
Confidence 5
No 144
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.72 E-value=6e-08 Score=78.49 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=53.7
Q ss_pred CC-CceEEEe-CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecC-CCCCCCHHHHHHHHHhh
Q psy1172 18 KL-PYPIIAD-QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP-ATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l-~fpllsD-~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~-~~~~r~~~eilr~l~~l 88 (276)
++ +||+++| ++++++++||+..... |+ +.|++||||++|+|++.+..+ .....+++++++.|++|
T Consensus 96 ~~~~~~~l~D~~~~~~~~~~gv~~~~~----g~--~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 96 GLDNAIMLSDYFDHSFGRDYALLINEW----HL--LARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp TCTTSEEEECTTTCHHHHHHTCBCTTT----CS--BCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred CCCCcEEecCCchhHHHHHhCCccccC----Cc--eEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 47 9999999 8999999999975431 43 468999999999999999865 34556889999999875
No 145
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.71 E-value=7.2e-09 Score=85.32 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=52.4
Q ss_pred ecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCcc
Q psy1172 174 LECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVDDFK 253 (276)
Q Consensus 174 l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~ 253 (276)
++ +++|+++||+|| ++|||+|+.++|.|.++++++ .++.++.|++|.. .+..+.+..++..++|..++.|.++
T Consensus 49 l~-~~~~k~vvv~F~-A~WC~pC~~~~P~l~~l~~~~--~~v~~~~v~~d~~---~~~~~~~~~~~v~~iPt~i~~~~~G 121 (167)
T 1z6n_A 49 LQ-RIERRYRLLVAG-EMWCPDCQINLAALDFAQRLQ--PNIELAIISKGRA---EDDLRQRLALERIAIPLVLVLDEEF 121 (167)
T ss_dssp HH-TCCSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHC--TTEEEEEECHHHH---HHHTTTTTTCSSCCSSEEEEECTTC
T ss_pred HH-HhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHC--CCcEEEEEECCCC---HHHHHHHHHcCCCCcCeEEEECCCC
Confidence 44 678999999999 999999999999999999876 3689999987642 2223333222223566667767543
No 146
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.69 E-value=1.3e-08 Score=84.99 Aligned_cols=64 Identities=8% Similarity=0.085 Sum_probs=47.4
Q ss_pred CCC--ceEEEeCccHHHHHhCCCCCCCCCCCCCC-cccceEEEECCCCcEEEEEecCCCCC---CCHHHHHHH
Q psy1172 18 KLP--YPIIADQDRSLAVQLGMLDPVEKDSKGMP-LTCRAVFIIDPAKKLRLSFLYPATTG---RNFDEILRV 84 (276)
Q Consensus 18 ~l~--fpllsD~~~~va~~yG~~~~~~~~~~g~~-~~~R~tfiIdp~g~I~~~~~~~~~~~---r~~~eilr~ 84 (276)
+++ ||+|+|++++++++||+..+... .|+. .+.|+||||| +|+|++++.++...+ .+++++|+.
T Consensus 114 ~~~~~fp~l~D~~~~va~~yGv~~~~~~--~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 114 GGMGKIHFLSDWNAAFTKAIGMEIDLSA--GTLGIRSKRYSMLVE-DGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp TCTTTSEEEECTTCHHHHHTTCEEEEGG--GTCEEEECCEEEEEE-TTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred CCCCceEEEEcCchHHHHHcCCceeccc--cCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 477 99999999999999999754211 1221 1579999997 999999999876544 355666554
No 147
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.68 E-value=2.3e-08 Score=82.21 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=49.9
Q ss_pred CCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++||+|+|++++++++||+..+......|+. ..|.+|||| +|+|++++..+...+++..++.++|++|
T Consensus 104 ~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~-~~~~t~~I~-~G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 104 DAIEFYGDFDGSFHKSLELTTDLSAGLLGIR-SERWSAYVV-DGKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp TTSEEEECTTCHHHHHHTCEEECTTTTCCEE-ECCEEEEEE-TTEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred CceEEEECCccHHHHHhCCccccccccCCcc-cceeEEEEE-CCEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 5899999999999999999754321111221 358899999 9999999998777777655555555543
No 148
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.67 E-value=7.4e-08 Score=77.19 Aligned_cols=67 Identities=16% Similarity=0.363 Sum_probs=56.9
Q ss_pred CCCCceEEEeC--ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQ--DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~--~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||+++|. ++++++.||+..... |+ |.|++||||++|+|++.+..+.....+++++++.|++||
T Consensus 91 ~~~~~~~~~d~~~~~~~~~~~~v~~~~~----~~--p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 91 SGFTFPLLSDFWPHGAVSQAYGVFNEQA----GI--ANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp HTCCSCEEECTTTTTHHHHHTTCEETTT----TE--ECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred cCCCceEEecCCcChHHHHHcCCccccC----CC--eeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 34899999995 999999999864331 33 578999999999999999987777779999999999887
No 149
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.66 E-value=5.8e-08 Score=80.46 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=59.8
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCC----CCCC-CHHHHHHHHHhhccc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPA----TTGR-NFDEILRVLDSLQLT 91 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~----~~~r-~~~eilr~l~~lq~~ 91 (276)
++++||++.|.++++++.||+. ..+++||||++|+|++...+.. ..|. +.+++.+.|++|...
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 108 LGYPFPYLYDETQEVAKAYDAA------------CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HTCCSCEEECSSCHHHHHHTCC------------EESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred cCCCceEEECCchHHHHHhCCC------------CCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 4589999999999999999974 2469999999999999875332 1233 678888888876422
Q ss_pred ------ccCCCCcCCCCCCCC
Q psy1172 92 ------DTKKVATPVDWKVGM 106 (276)
Q Consensus 92 ------~~~~~~~p~~w~~g~ 106 (276)
....+.||++|++|+
T Consensus 176 ~~~~~~~~~~~gC~~~~~~~~ 196 (196)
T 2ywi_A 176 RPVPEKQKPSIGCSIKWKPSA 196 (196)
T ss_dssp CCCCSCCCCCEEEECCCCCCC
T ss_pred CCCCCCCCCCCceeeeeccCC
Confidence 223578999999986
No 150
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.65 E-value=8.5e-08 Score=81.68 Aligned_cols=79 Identities=15% Similarity=0.289 Sum_probs=57.7
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCC-----CCCCHHHHHHHHHhhccc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPAT-----TGRNFDEILRVLDSLQLT 91 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~-----~~r~~~eilr~l~~lq~~ 91 (276)
.+++||++.|.++++++.||+. ..+++||||++|+|++....... .....+++.++|++|...
T Consensus 121 ~~~~~~~l~D~~~~~~~~~~v~------------~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 121 YGYGFPYLKDASQSVAKAYGAA------------CTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HTCCSCEEECTTCHHHHHHTCC------------EESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred hCCCccEEECCccHHHHHcCCC------------CCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 4589999999999999999985 24799999999999987654322 122457777777776422
Q ss_pred c------cCCCCcCCCCCCCCc
Q psy1172 92 D------TKKVATPVDWKVGME 107 (276)
Q Consensus 92 ~------~~~~~~p~~w~~g~~ 107 (276)
. ...+.||++|.+|++
T Consensus 189 ~~~~~~~~~~~GC~i~w~~~~~ 210 (218)
T 3u5r_E 189 KDVGTTQVPSIGCNIKWTAGNE 210 (218)
T ss_dssp CCCCSCCCCCEEEECCCCCC--
T ss_pred CCCCcCCcCCCCeeEEeCCCCC
Confidence 2 234679999999875
No 151
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.64 E-value=5.9e-08 Score=80.07 Aligned_cols=79 Identities=16% Similarity=0.324 Sum_probs=57.2
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCC----CCCCCHHHHHHHHHhhcc--
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPA----TTGRNFDEILRVLDSLQL-- 90 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~----~~~r~~~eilr~l~~lq~-- 90 (276)
++++||++.|.++++++.||+. ..+++||||++|+|++...... ....+.+++.+.|++|..
T Consensus 94 ~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 94 HGIFFPYLLDETQEVAKAYRAL------------RTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HTCCSCEEECSSSHHHHHTTCC------------EESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred hCCCceEEECCcchHHHHcCCC------------CCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 4589999999999999999975 2469999999999998832110 111245677777776542
Q ss_pred ----cccCCCCcCCCCCCCCc
Q psy1172 91 ----TDTKKVATPVDWKVGME 107 (276)
Q Consensus 91 ----~~~~~~~~p~~w~~g~~ 107 (276)
.....+.||++|+||++
T Consensus 162 ~~~~~~~~~~gc~~~~~~~~~ 182 (188)
T 2cvb_A 162 EPPLKEAPAIGCTIKWRPGNE 182 (188)
T ss_dssp CCCSSCCCCCSEECCCCTTCC
T ss_pred CCCcccCCCCceEEEecCCCC
Confidence 22245889999999874
No 152
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.63 E-value=7.2e-08 Score=83.18 Aligned_cols=70 Identities=21% Similarity=0.330 Sum_probs=55.3
Q ss_pred CCCC-ceEEEeCccHHHHHhCCCCCCCCCCCCCC-cccceEEEECCCCcEEEEEecCCCCC-----CCHHHHHHHHHhhc
Q psy1172 17 GKLP-YPIIADQDRSLAVQLGMLDPVEKDSKGMP-LTCRAVFIIDPAKKLRLSFLYPATTG-----RNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~-fpllsD~~~~va~~yG~~~~~~~~~~g~~-~~~R~tfiIdp~g~I~~~~~~~~~~~-----r~~~eilr~l~~lq 89 (276)
++++ ||+++|++++++++||+..+... .|+. .+.|+|||| ++|+|++++..+...| ++++|+|+.|++.+
T Consensus 90 ~~~~~~~~l~D~~~~~~~~~gv~~~~~~--~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~ 166 (241)
T 1nm3_A 90 EKSENISFIPDGNGEFTEGMGMLVGKED--LGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH 166 (241)
T ss_dssp TTCTTSEEEECTTSHHHHHTTCEEECTT--TTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS
T ss_pred cCCCceEEEECCCcHHHHHhCceeeccc--ccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc
Confidence 3476 99999999999999999754211 1321 146999999 9999999999887777 69999999997643
No 153
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.59 E-value=5.8e-08 Score=75.55 Aligned_cols=75 Identities=8% Similarity=0.033 Sum_probs=54.6
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHH--HHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCcch
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVL--QLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVDDFKE 254 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~--~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~ 254 (276)
..||++||+|| ++||++|+..+|.|. ++.+++.+ ++.++.|+.++........+++.-....++|..++.|.++.
T Consensus 27 ~~~k~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 27 RTHKPTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGK 103 (133)
T ss_dssp HHTCCEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSC
T ss_pred hcCCcEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCC
Confidence 45899999999 999999999999999 89888864 59999999943333344556652100015677777776654
No 154
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.59 E-value=4.5e-08 Score=79.40 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=48.6
Q ss_pred CCC--CceEEEeCccHHHHHhCCCCCCCCCCCCCC-cccceEEEECCCCcEEEEEecCCCCCC---CHHHHHHH
Q psy1172 17 GKL--PYPIIADQDRSLAVQLGMLDPVEKDSKGMP-LTCRAVFIIDPAKKLRLSFLYPATTGR---NFDEILRV 84 (276)
Q Consensus 17 ~~l--~fpllsD~~~~va~~yG~~~~~~~~~~g~~-~~~R~tfiIdp~g~I~~~~~~~~~~~r---~~~eilr~ 84 (276)
+++ +||+++|++++++++||+..... ..|+. .+.|++|||| +|+|++++..+ ..+| ++++||+.
T Consensus 92 ~~~~~~~~~l~D~~~~~~~~~gv~~~~~--~~g~~~~~~p~~~vid-~G~i~~~~~~~-~~~~~~~~~~~vl~~ 161 (162)
T 1tp9_A 92 YPENKHVKFLADGSATYTHALGLELDLQ--EKGLGTRSRRFALLVD-DLKVKAANIEG-GGEFTVSSAEDILKD 161 (162)
T ss_dssp CTTCSSEEEEECTTSHHHHHTTCEEEET--TTTSEEEECCEEEEEE-TTEEEEEEECS-SSCCSSCSHHHHHTT
T ss_pred cCCCCCeEEEECCCchHHHHcCcccccc--cCCCCccceeEEEEEE-CCEEEEEEeeC-CCCCccCCHHHHHhh
Confidence 457 89999999999999999974321 01321 1469999999 99999999877 6555 58888754
No 155
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.58 E-value=1.5e-07 Score=79.31 Aligned_cols=68 Identities=24% Similarity=0.258 Sum_probs=54.5
Q ss_pred CCCC-CceEEEeC-ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecC-CCCCCCHHHHHHHHH
Q psy1172 16 DGKL-PYPIIADQ-DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP-ATTGRNFDEILRVLD 86 (276)
Q Consensus 16 ~~~l-~fpllsD~-~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~-~~~~r~~~eilr~l~ 86 (276)
..++ +||+++|+ +++++++||+..... ...|+ +.|++||||++|+|++++..+ ....++++++|+.|+
T Consensus 130 ~~~~~~f~~l~D~~~~~~~~~ygv~~~~~-~~~g~--~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 130 AEGLSNVITLSTLRGADFKQAYGVAITEG-PLAGL--TARAVVVLDGQDNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp TTTCTTEEEEETTSCTHHHHHTTCEECSS-TTTTS--BCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred HcCCCCceEEecCchHHHHHHhCceeecc-cCCCc--cccEEEEECCCCeEEEEEecCCcccCCCHHHHHHhhC
Confidence 4679 99999999 999999999975431 11243 469999999999999999754 667789999998874
No 156
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.58 E-value=1.3e-07 Score=76.63 Aligned_cols=68 Identities=24% Similarity=0.298 Sum_probs=53.2
Q ss_pred CCCC-CceEEEeC-ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEec-CCCCCCCHHHHHHHHH
Q psy1172 16 DGKL-PYPIIADQ-DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLY-PATTGRNFDEILRVLD 86 (276)
Q Consensus 16 ~~~l-~fpllsD~-~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~-~~~~~r~~~eilr~l~ 86 (276)
.+++ +||+++|+ +++++++||+..... ...|. ..|++||||++|+|++.+.. .....++++++|+.|+
T Consensus 95 ~~~~~~~~~l~D~~~~~~~~~~gv~~~~~-~~~g~--~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 95 AEGIENAKTVSTFRNHALHSQLGVDIQTG-PLAGL--TSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp TTTCTTEEEEECTTCTHHHHHTTCEECSS-TTTTS--BCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred HcCCCceEEeeccccchHHHHhCceeccc-ccCCc--cceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 3678 79999998 899999999874321 11133 46999999999999999984 5667789999998763
No 157
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.56 E-value=5.6e-08 Score=77.24 Aligned_cols=75 Identities=5% Similarity=-0.024 Sum_probs=60.1
Q ss_pred ccCCCCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHH
Q psy1172 155 AAALLPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKA 234 (276)
Q Consensus 155 ~G~~aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~ 234 (276)
.|..+|++.+.+.++..+... ..+++++||.|| +.||++|+...|.|+++++++.. ++.++.|+.|... ...++
T Consensus 31 ~~~~~~~~~v~~l~~~~~~~~-~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---~l~~~ 104 (148)
T 3p2a_A 31 CGHSLFDGEVINATAETLDKL-LQDDLPMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEP---ALSTR 104 (148)
T ss_dssp TCCBTTCCCCEECCTTTHHHH-TTCSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---HHHHH
T ss_pred cCCccccCCceecCHHHHHHH-HhcCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCH---HHHHH
Confidence 567788888888887766544 357899999999 99999999999999999999854 4899999988643 33445
Q ss_pred H
Q psy1172 235 L 235 (276)
Q Consensus 235 ~ 235 (276)
+
T Consensus 105 ~ 105 (148)
T 3p2a_A 105 F 105 (148)
T ss_dssp T
T ss_pred C
Confidence 5
No 158
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.53 E-value=1.1e-07 Score=73.66 Aligned_cols=63 Identities=6% Similarity=-0.022 Sum_probs=47.1
Q ss_pred CCcEEecCCCCeEEecccC-CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhC-CcEEEEEeCCC
Q psy1172 160 PGCSLLGCQASLVILECSI-PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQR-TCKVIALSCDS 224 (276)
Q Consensus 160 PdF~L~~~~G~~v~l~~~~-~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~-gv~Vv~VS~D~ 224 (276)
++-.+...++..+... .. .+++++|.|| ++||++|+...|.|.++++++... ++.++.|+.+.
T Consensus 5 ~~~~v~~l~~~~~~~~-~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~ 69 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAI-VMDPKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA 69 (133)
T ss_dssp SSCSSEECCTTTCCCC-CTCTTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT
T ss_pred CCCceEEEcCCCHHHH-hccCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc
Confidence 3444455555544433 22 4899999999 999999999999999999999753 57888887764
No 159
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.51 E-value=1.6e-07 Score=71.55 Aligned_cols=61 Identities=5% Similarity=-0.118 Sum_probs=46.2
Q ss_pred EecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh----CCcEEEEEeCCCh
Q psy1172 164 LLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ----RTCKVIALSCDSV 225 (276)
Q Consensus 164 L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~----~gv~Vv~VS~D~~ 225 (276)
+.+.+++.+...-.-++++++|.|| ++||++|+...|.|+++++++.+ .++.++.|+.+..
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~ 73 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN 73 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS
T ss_pred eEEecccCHHHHhhcCCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc
Confidence 3344444433221136899999999 99999999999999999999976 2688999988753
No 160
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.46 E-value=4.1e-07 Score=74.03 Aligned_cols=68 Identities=31% Similarity=0.451 Sum_probs=53.5
Q ss_pred CCC-CceEEEe-CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCC-CCCCCHHHHHHHHHhh
Q psy1172 17 GKL-PYPIIAD-QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPA-TTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l-~fpllsD-~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~-~~~r~~~eilr~l~~l 88 (276)
.++ +||+++| +++++ ++||+..... ...|. ..|++||||++|+|++.+..+. ....+.+++++.|++|
T Consensus 100 ~~~~~~~~l~D~~~~~~-~~~gv~~~~~-~~~g~--~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 100 FNIQNVTVASDFRYRDM-EKYGVLIGEG-ALKGI--LARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp TTCCSSEEEECTTTCGG-GGGTCBBCSS-TTTTS--BCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cCCCCeEEeecCccCcH-HHhCCEeccc-ccCCc--eeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 457 8999999 89999 9999975431 11133 4689999999999999998653 3566899999999876
No 161
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.44 E-value=1.4e-07 Score=75.75 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=43.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.++++||+|| ++||++|+.++|.|.++++++.++ +.++.|++|... ++.+++
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~---~l~~~~ 73 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTA---VYTQYF 73 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCC---HHHHHT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCH---HHHHHc
Confidence 5899999999 999999999999999999988543 899999997543 334555
No 162
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.44 E-value=1.1e-07 Score=77.55 Aligned_cols=47 Identities=13% Similarity=-0.073 Sum_probs=35.0
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCCh
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..+||+++|+|| ++||++|+...+.+ .++.+.+++ ++.++.|+.|..
T Consensus 44 ~~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~ 93 (172)
T 3f9u_A 44 RQHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK 93 (172)
T ss_dssp HHTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC
T ss_pred HHcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc
Confidence 357999999999 99999999863333 444444433 699999998753
No 163
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.43 E-value=4.7e-07 Score=69.83 Aligned_cols=66 Identities=9% Similarity=-0.056 Sum_probs=49.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCc
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~ 252 (276)
.++++||.|| +.||++|+...|.|.++++++.+. +.++.|+.|... ...+++.-. ++|.-++.+..
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~---~l~~~~~v~---~~Pt~~~~~~~ 99 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQ---SLGGQYGVQ---GFPTIKIFGAN 99 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCH---HHHHHHTCC---SSSEEEEESSC
T ss_pred CCCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCH---HHHHHcCCC---ccCEEEEEeCC
Confidence 4789999999 999999999999999999998643 889999988643 334455211 45555555543
No 164
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.42 E-value=3.4e-07 Score=68.80 Aligned_cols=46 Identities=11% Similarity=0.179 Sum_probs=39.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++++++|.|| ++||++|+...|.|.+++++++..++.++.|+.|..
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 65 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN 65 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC
Confidence 4899999999 999999999999999999997667899999999854
No 165
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.40 E-value=5e-09 Score=85.58 Aligned_cols=89 Identities=7% Similarity=-0.092 Sum_probs=57.1
Q ss_pred CCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhc
Q psy1172 159 LPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRD 238 (276)
Q Consensus 159 aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~ 238 (276)
++++...+.+ +.+.+. ..+||++||+|| ++|||+|+.++|.|+++.+.+. .++.++.|++|..... ....+.-
T Consensus 27 ~~~i~w~~~~-~~~~~~-~~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~-~~~~~~~v~~d~~~~~--~~~~~~~- 99 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEA-AASGLPLMVIIH-KSWCGACKALKPKFAESTEISE-LSHNFVMVNLEDEEEP--KDEDFSP- 99 (164)
T ss_dssp CTTSCBCCHH-HHHHHH-HHHTCCEEEEEE-CTTCHHHHHHHHHHHTCHHHHH-HHTTSEEEEEEGGGSC--SCGGGCT-
T ss_pred cccccccCHH-HHHHHH-HhcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhh-cCCeEEEEEecCCchH--HHHHhcc-
Confidence 4455554444 344555 567999999999 9999999999999999766543 3577888888654320 1112210
Q ss_pred ccCCeeEEEeeCCcch
Q psy1172 239 CILGLLINLSVDDFKE 254 (276)
Q Consensus 239 ~~~~~~~~~l~D~~~~ 254 (276)
.+..+|..++.|.++.
T Consensus 100 ~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 100 DGGYIPRILFLDPSGK 115 (164)
T ss_dssp TCSCSSEEEEECTTSC
T ss_pred cCCcCCeEEEECCCCC
Confidence 0113576777776654
No 166
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.38 E-value=8e-07 Score=71.72 Aligned_cols=67 Identities=19% Similarity=0.305 Sum_probs=54.2
Q ss_pred CCC-CceEEEe-CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecC-CCCCCCHHHHHHHHHhhc
Q psy1172 17 GKL-PYPIIAD-QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP-ATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l-~fpllsD-~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~-~~~~r~~~eilr~l~~lq 89 (276)
.++ +||+++| .++++++.||+..... |+ ..|++||||++|+|++.+..+ .....+.+++++.|++|.
T Consensus 97 ~~~~~~~~~~d~~~~~~~~~~~v~~~~~----g~--~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 97 NGIDKVETLSDHRDMSFGEAFGVYIKEL----RL--LARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp SSCTTEEEEEGGGTCHHHHHTTCBBTTT----CS--BCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCCCceEeeCCchhHHHHHhCCccccC----Cc--eeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 567 8999999 9999999999875431 33 358999999999999999854 344557899999998874
No 167
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.38 E-value=9.9e-08 Score=72.19 Aligned_cols=46 Identities=7% Similarity=0.086 Sum_probs=39.7
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..++|++||.|| ++||++|+...|.+.++.+++ .++.++.|++|..
T Consensus 17 ~~~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~d~~ 62 (105)
T 3zzx_A 17 EAGNKLVVIDFY-ATWCGPCKMIAPKLEELSQSM--SDVVFLKVDVDEC 62 (105)
T ss_dssp HTTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTEEEEEEETTTC
T ss_pred hcCCCEEEEEEE-CCCCCCccCCCcchhhhhhcc--CCeEEEEEecccC
Confidence 346789999999 999999999999999998887 4588888988754
No 168
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.38 E-value=5.6e-07 Score=67.90 Aligned_cols=45 Identities=9% Similarity=-0.011 Sum_probs=40.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++++++|.|| ++||++|....|.|.++++++.+ ++.++.|+.|..
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~ 60 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN 60 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC
Confidence 6899999999 99999999999999999999864 699999999854
No 169
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.37 E-value=9.6e-08 Score=72.97 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=48.7
Q ss_pred ccCCCCCcEEecCCCCeEEecc-cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 155 AAALLPGCSLLGCQASLVILEC-SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 155 ~G~~aPdF~L~~~~G~~v~l~~-~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.|...+.+.+.+.++-...+.+ .-.+++++|.|| ++|||+|+...|.|+++.+++.+ +.++.|+.|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~ 76 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL 76 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC
Confidence 5666777777655432222221 115889999999 99999999999999999998854 99999999864
No 170
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.37 E-value=2.9e-07 Score=70.17 Aligned_cols=53 Identities=6% Similarity=0.003 Sum_probs=43.9
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
+.+++++||.|| ++||++|+...|.|.++++++.+ +.++.|+.|... ...+++
T Consensus 28 ~~~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~---~l~~~~ 80 (116)
T 3qfa_C 28 AAGDKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQ---DVASEC 80 (116)
T ss_dssp HHTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTH---HHHHHT
T ss_pred hcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCH---HHHHHc
Confidence 347899999999 99999999999999999998844 999999998643 344555
No 171
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.37 E-value=1.4e-06 Score=71.35 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=52.2
Q ss_pred CCC-CceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEe-cCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKL-PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFL-YPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l-~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~-~~~~~~r~~~eilr~l~~l 88 (276)
.++ +||+++|+++++++.||+..... ...|. +.|++||||++|+|++.+. ++.....+++++|+.+++-
T Consensus 96 ~~~~~~~~l~D~~~~~~~~~gv~~~~~-~~~g~--~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~ 166 (175)
T 1xvq_A 96 EGTENVMPASAFRDSFGEDYGVTIADG-PMAGL--LARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGAT 166 (175)
T ss_dssp ----CEEEEECTTSSHHHHTTCBBCSS-TTTTS--BCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHT
T ss_pred cCCCCceEeeCCHHHHHHHhCCccccc-ccCCc--ccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhh
Confidence 567 89999999999999999875321 11233 5689999999999999997 3555666899999988743
No 172
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=4.8e-07 Score=69.57 Aligned_cols=46 Identities=7% Similarity=0.025 Sum_probs=40.6
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+++ ++||.|| ++||++|+..+|.|.++++++.+.++.++.|+.|..
T Consensus 21 ~~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~ 66 (126)
T 1x5e_A 21 LEG-DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ 66 (126)
T ss_dssp TSS-EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC
T ss_pred hCC-CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC
Confidence 344 4899999 999999999999999999999877899999998754
No 173
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.36 E-value=4.8e-07 Score=70.87 Aligned_cols=68 Identities=12% Similarity=0.039 Sum_probs=50.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCcch
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVDDFKE 254 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~ 254 (276)
.++++||.|| ++||++|+...|.|.++++++.+ ++.++.|+.|... +..+++.- .++|.-++.|.++.
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~---~l~~~~~v---~~~Pt~~~~~~~G~ 104 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQ---ELAGAFGI---RSIPSILFIPMEGK 104 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---HHHHHTTC---CSSCEEEEECSSSC
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCH---HHHHHcCC---CCCCEEEEECCCCc
Confidence 4689999999 99999999999999999999864 4999999998643 33444411 14565566665554
No 174
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=3.9e-07 Score=71.40 Aligned_cols=47 Identities=6% Similarity=-0.034 Sum_probs=41.7
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
-++++++|.|| ++||++|+...|.|+++++++.+.++.++.|+.|..
T Consensus 24 ~~~~~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~ 70 (137)
T 2dj0_A 24 DKRVTWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY 70 (137)
T ss_dssp STTSCEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC
T ss_pred CCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC
Confidence 35679999999 999999999999999999999766799999988753
No 175
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.35 E-value=5.3e-07 Score=71.67 Aligned_cols=45 Identities=9% Similarity=0.138 Sum_probs=40.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|+|| ++||++|+...|.|+++++++++ .+.++.|++|..
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~ 66 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV 66 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC
Confidence 4899999999 99999999999999999999854 489999998854
No 176
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.34 E-value=6.1e-07 Score=73.39 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=50.2
Q ss_pred CCCC--ceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLP--YPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~--fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.+++ ||+|+|++++++++||+...... ..|...+.|+|||| ++|+|++++.++...++++...-.+++.|
T Consensus 88 ~~~~~~fp~l~D~~~~~~~~~gv~~~~~~-~~g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 88 HGADDKVQMLADPGGAFTKAVDMELDLSA-VLGNVRSKRYSLVI-EDGVVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp TTCTTTSEEEECTTSHHHHHTTCEECCHH-HHSSCEECCEEEEE-ETTEEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred cCCCcceEEEECCCCcHHHHcCCcccccc-ccCcccceEEEEEE-eCCEEEEEEecCCCCcceeccHHHHHHHh
Confidence 3477 99999999999999998743110 00212256999999 99999999998887777654444444444
No 177
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.33 E-value=8.4e-07 Score=66.54 Aligned_cols=44 Identities=11% Similarity=0.125 Sum_probs=39.6
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
.+|++++|.|| ++|||+|+...|.|.++++++. ++.++.|+.++
T Consensus 22 ~~~~~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~ 65 (111)
T 2pu9_C 22 AGDKPVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ 65 (111)
T ss_dssp CTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS
T ss_pred cCCCEEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc
Confidence 46899999999 9999999999999999999884 59999999873
No 178
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.32 E-value=7.6e-07 Score=66.70 Aligned_cols=45 Identities=9% Similarity=0.101 Sum_probs=40.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++|||+|+...|.|.++++++.+ .+.++.|+.|..
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 66 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN 66 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC
Confidence 4789999999 99999999999999999999864 499999999864
No 179
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.32 E-value=7.9e-07 Score=65.64 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=41.4
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVE 226 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~ 226 (276)
++++++|.|| ++|||+|+...|.++++++++.++ +.++.|+.|...
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~ 63 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENP 63 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCH
T ss_pred cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCH
Confidence 7899999999 999999999999999999998654 999999998643
No 180
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.31 E-value=6.7e-07 Score=67.27 Aligned_cols=51 Identities=8% Similarity=0.087 Sum_probs=42.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++|++||.|| ++||++|+...|.|+++++++ .++.++.|+.|... ...+++
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~~~p~l~~l~~~~--~~~~~~~vd~~~~~---~l~~~~ 73 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKMIAPMIEKFSEQY--PQADFYKLDVDELG---DVAQKN 73 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCH---HHHHHT
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCH---HHHHHc
Confidence 5899999999 999999999999999999988 45899999988543 334455
No 181
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.31 E-value=7.2e-07 Score=68.92 Aligned_cols=67 Identities=7% Similarity=-0.036 Sum_probs=49.3
Q ss_pred cCCCCCcEEecCCCCeEEecc-cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 156 AALLPGCSLLGCQASLVILEC-SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 156 G~~aPdF~L~~~~G~~v~l~~-~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++..+-+++.+.++-...+.. ..+++++||.|| ++|||+|+...|.|+++++++. ++.++.|+.|..
T Consensus 13 ~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~ 80 (124)
T 1xfl_A 13 SEEGQVIACHTVETWNEQLQKANESKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDEL 80 (124)
T ss_dssp CCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTS
T ss_pred cCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccC
Confidence 344455666554432222221 236899999999 9999999999999999999884 799999998854
No 182
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.30 E-value=1.1e-07 Score=74.53 Aligned_cols=59 Identities=7% Similarity=0.020 Sum_probs=44.1
Q ss_pred cEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 162 CSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 162 F~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+++.+.++-...++ ..+|+++||.|| ++||++|+...|.|+++.+++ ++.++.|+.|..
T Consensus 23 ~~l~~~~~~~~~l~-~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~ 81 (133)
T 3cxg_A 23 IELKNTGSLNQVFS-STQNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH 81 (133)
T ss_dssp EECCCTTHHHHHHT-C-CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC
T ss_pred EEecChhHHHHHHH-hcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch
Confidence 44444444333444 567899999999 999999999999999877765 588888888754
No 183
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.29 E-value=8.9e-07 Score=65.43 Aligned_cols=45 Identities=9% Similarity=0.031 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++|||+|+...|.|+++.+++.++ +.++.|+.|..
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~ 60 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDEN 60 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTTC
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcCC
Confidence 5789999999 999999999999999999988643 89999998864
No 184
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.29 E-value=9.9e-07 Score=65.96 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=43.1
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
+++++|.|| ++|||+|+...|.|+++++++.+ ++.++.|+.|... ...+++
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~---~~~~~~ 74 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVA---AVAEAA 74 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTH---HHHHHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchH---HHHHHc
Confidence 889999999 99999999999999999999864 7999999998643 334455
No 185
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.29 E-value=8.7e-07 Score=68.39 Aligned_cols=46 Identities=9% Similarity=-0.013 Sum_probs=40.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh---CCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ---RTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~---~gv~Vv~VS~D~~ 225 (276)
.++++||.|| +.||++|+...|.|.++++++.+ .++.++.|+.+..
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 72 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN 72 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC
T ss_pred CCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC
Confidence 4789999999 99999999999999999999973 4589999988754
No 186
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.28 E-value=1e-06 Score=65.55 Aligned_cols=44 Identities=2% Similarity=-0.001 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++++++|.|| ++||++|+...|.|.++++++ .++.++.|+.|..
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~ 63 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQC 63 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTS
T ss_pred CCCEEEEEEE-CCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccC
Confidence 6899999999 999999999999999999988 4699999999854
No 187
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.28 E-value=1e-06 Score=67.41 Aligned_cols=77 Identities=9% Similarity=-0.005 Sum_probs=53.4
Q ss_pred ecCCCCeEEecccC--CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCC
Q psy1172 165 LGCQASLVILECSI--PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILG 242 (276)
Q Consensus 165 ~~~~G~~v~l~~~~--~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~ 242 (276)
.+.+|....+.+.+ .++++||.|| ++||++|+...|.|.++++++ .++.++.|+.|... ...+++.-. +
T Consensus 6 ~~~~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~---~~~~~~~i~---~ 76 (118)
T 2f51_A 6 VHFNGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNG---NAADAYGVS---S 76 (118)
T ss_dssp EEECSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCH---HHHHHTTCC---S
T ss_pred eEecCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCH---HHHHhcCCC---C
Confidence 34455444443222 4889999999 999999999999999999988 67999999998543 234444211 4
Q ss_pred eeEEEeeC
Q psy1172 243 LLINLSVD 250 (276)
Q Consensus 243 ~~~~~l~D 250 (276)
+|.-++.+
T Consensus 77 ~Pt~~~~~ 84 (118)
T 2f51_A 77 IPALFFVK 84 (118)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEe
Confidence 45545544
No 188
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.28 E-value=1.1e-06 Score=65.15 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++|||+|....|.|+++++++.+ .+.++.|+.|..
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 62 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES 62 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC
Confidence 4789999999 99999999999999999998864 499999998754
No 189
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.28 E-value=5.8e-07 Score=70.23 Aligned_cols=46 Identities=9% Similarity=0.027 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCC--cEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRT--CKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~g--v~Vv~VS~D~~ 225 (276)
.++++||.|| +.||++|+...|.|.++++++.+.+ +.++.|+.+..
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~ 80 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc
Confidence 5789999999 9999999999999999999998764 77777777643
No 190
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.27 E-value=6e-07 Score=68.83 Aligned_cols=46 Identities=4% Similarity=-0.080 Sum_probs=42.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++++++|.|| ++|||+|....+.|+++.+++.++++.++.|+.|..
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~ 77 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ 77 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC
Confidence 5789999999 999999999999999999999877899999999864
No 191
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.27 E-value=8.2e-07 Score=65.44 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=39.8
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++|||+|....+.|.++++++.+ .+.++.|+.|..
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 61 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA 61 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch
Confidence 4789999999 99999999999999999998854 489999998754
No 192
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.27 E-value=6.4e-07 Score=78.80 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=41.1
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
-+|++|||+|| ++||++|+...|.|.++++++.+ .+.++.|++|..
T Consensus 24 ~~~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~ 69 (287)
T 3qou_A 24 SMTTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE 69 (287)
T ss_dssp TTTSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC
T ss_pred cCCCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC
Confidence 35899999999 99999999999999999999964 499999999853
No 193
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.26 E-value=1.3e-06 Score=66.74 Aligned_cols=44 Identities=14% Similarity=0.211 Sum_probs=39.6
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
.+|++++|.|| ++|||+|+...|.|+++++++. ++.++.|+.++
T Consensus 35 ~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~ 78 (124)
T 1faa_A 35 AGDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ 78 (124)
T ss_dssp TTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS
T ss_pred cCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc
Confidence 47899999999 9999999999999999999884 68999999873
No 194
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.26 E-value=4e-06 Score=71.32 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=43.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCC--cEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRT--CKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~g--v~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| +.||++|+...|.+.++++++.+++ +.++.|+.+... +..+++
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~---~l~~~~ 200 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET---DLAKRF 200 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHT
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH---HHHHHc
Confidence 3578999999 9999999999999999999998654 888888887533 345555
No 195
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.25 E-value=1.7e-06 Score=64.71 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=40.4
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| +.|||+|....|.|.++.+++.++ +.++.|+.|..
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~ 68 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPN 68 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTC
T ss_pred CCceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCC
Confidence 5789999999 999999999999999999998654 99999999854
No 196
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.25 E-value=1.2e-06 Score=70.24 Aligned_cols=66 Identities=24% Similarity=0.396 Sum_probs=48.1
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCC---CCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPAT---TGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~---~~r~~~eilr~l~~lq 89 (276)
++++||+++|+++++++.||+..... .| ..|++||| ++|+|++.+..... ..+.+++|++.|++|+
T Consensus 89 ~~~~~~~l~D~~~~~~~~~gv~~~p~---~g---~~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 157 (159)
T 2a4v_A 89 QNLPYHLLSDPKREFIGLLGAKKTPL---SG---SIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVAEKFK 157 (159)
T ss_dssp HTCSSEEEECTTCHHHHHHTCBSSSS---SC---BCCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCceEEECCccHHHHHhCCccccc---CC---ccceEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHHHHhh
Confidence 34899999999999999999974321 13 36899999 99999999973221 2344566666666654
No 197
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.24 E-value=8.8e-07 Score=75.43 Aligned_cols=54 Identities=7% Similarity=0.004 Sum_probs=45.2
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCC--cEEEEEeCCChHHHHHHHHHH
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRT--CKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~g--v~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+|++++|.|| ++||++|+..+|.|.++++++++.+ +.++.|+.|... +..+++
T Consensus 30 ~~~~~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~ 85 (241)
T 3idv_A 30 ADKDTVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS---VLASRF 85 (241)
T ss_dssp TTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHT
T ss_pred hcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH---HHHHhc
Confidence 46899999999 9999999999999999999998776 888888887543 344555
No 198
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.24 E-value=1.3e-06 Score=68.37 Aligned_cols=52 Identities=6% Similarity=0.065 Sum_probs=43.7
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+|+++||.|| ++||++|+...|.|+++++++ .++.++.|+.|... +..+++
T Consensus 44 ~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~~~---~~~~~~ 95 (139)
T 3d22_A 44 RDGKIVLANFS-ARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDELS---DFSASW 95 (139)
T ss_dssp HHTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSH---HHHHHT
T ss_pred hcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcccH---HHHHHc
Confidence 46899999999 999999999999999999987 47999999998643 344555
No 199
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.24 E-value=6.1e-07 Score=66.82 Aligned_cols=45 Identities=16% Similarity=0.295 Sum_probs=39.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVE 226 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~ 226 (276)
++++++|.|| ++||++|+...|.|+++++++ .++.++.|+.|...
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~~~~~ 61 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVMLRKVNYVLENY--NYVEKIEILLQDMQ 61 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHHHHHHHHHHHTC--TTEEEEEEEECCC-
T ss_pred cCCCEEEEEe-CCCCcchHHHHHHHHHHHHHc--CCceEEEEECCCCH
Confidence 5789999999 999999999999999999988 36999999987543
No 200
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.24 E-value=1.2e-06 Score=66.71 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=39.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+|+++||.|| ++||++|+...|.|+++++++.+ +.++.|+.|..
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~ 72 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES 72 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC
Confidence 5789999999 99999999999999999998854 99999998854
No 201
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.24 E-value=1.7e-06 Score=63.85 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=40.4
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| +.||++|+...+.|.++.+++.+ ++.++.|+.|..
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 63 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN 63 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC
Confidence 5789999999 99999999999999999999864 699999998754
No 202
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.23 E-value=1.9e-06 Score=65.59 Aligned_cols=46 Identities=7% Similarity=0.054 Sum_probs=40.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVE 226 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~ 226 (276)
.+++++|.|| ++||++|+...|.|.++++++.+ ++.++.|+.+...
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~ 65 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYP 65 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCH
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCH
Confidence 4789999999 99999999999999999999864 6999999987643
No 203
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.23 E-value=1.7e-06 Score=65.97 Aligned_cols=52 Identities=10% Similarity=0.080 Sum_probs=43.2
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.++++||.|| +.||++|+...+.|+++++++.. ++.++.|+.|... ++.+++
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~---~l~~~~ 81 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHT---DLAIEY 81 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTH---HHHHHT
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCH---HHHHHc
Confidence 4789999999 99999999999999999998854 5999999998643 344445
No 204
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.22 E-value=2e-06 Score=63.41 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=41.0
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.++++++|.|| ++|||+|....|.|+++.++++ .++.++.|+.|..
T Consensus 18 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~ 63 (106)
T 1xwb_A 18 ASGKLVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDEC 63 (106)
T ss_dssp HTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTC
T ss_pred cCCCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccch
Confidence 46899999999 9999999999999999999885 5699999999854
No 205
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.22 E-value=1.7e-06 Score=63.60 Aligned_cols=45 Identities=13% Similarity=0.111 Sum_probs=40.6
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..+++++|.|| ++|||+|....+.|.++.+++. ++.++.|+.|..
T Consensus 17 ~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~ 61 (104)
T 2vim_A 17 NKGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQN 61 (104)
T ss_dssp TTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC
T ss_pred cCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCC
Confidence 46899999999 9999999999999999999874 799999999864
No 206
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.22 E-value=1.6e-06 Score=63.94 Aligned_cols=46 Identities=7% Similarity=0.073 Sum_probs=40.6
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..++++++|.|| ++|||+|+...|.+.++.+++. ++.++.|+.|..
T Consensus 17 ~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~ 62 (105)
T 3m9j_A 17 AAGDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDC 62 (105)
T ss_dssp HTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTC
T ss_pred hcCCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhh
Confidence 346899999999 9999999999999999999884 499999998854
No 207
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.21 E-value=2.6e-06 Score=65.62 Aligned_cols=53 Identities=11% Similarity=0.014 Sum_probs=42.8
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh----CCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ----RTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~----~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| ++||++|+...|.|.++++++.. .++.++.|+.|... +..+++
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~ 88 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP---DVIERM 88 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH---HHHHHT
T ss_pred CCCCEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH---hHHHhc
Confidence 4789999999 99999999999999999998863 34788888887533 344555
No 208
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.21 E-value=1.2e-06 Score=66.40 Aligned_cols=45 Identities=9% Similarity=0.120 Sum_probs=40.0
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..++++++|.|| ++||++|+...|.|+++++++ ++.++.|+.|..
T Consensus 30 ~~~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~ 74 (117)
T 2xc2_A 30 QHKNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKL 74 (117)
T ss_dssp HTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTS
T ss_pred hCCCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCcc
Confidence 357899999999 999999999999999988877 799999998854
No 209
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.21 E-value=1.7e-06 Score=64.26 Aligned_cols=45 Identities=11% Similarity=0.080 Sum_probs=39.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++||++|+...|.|+++++++.+ .+.++.|+.|..
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 63 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 63 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC
Confidence 5789999999 99999999999999999998854 489999998754
No 210
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.21 E-value=5.7e-07 Score=72.51 Aligned_cols=45 Identities=2% Similarity=0.010 Sum_probs=40.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.++++||.|| +.||++|+...|.|+++++++.+ .+.++.|+.|..
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~ 107 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH 107 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc
Confidence 5789999999 99999999999999999999965 499999999854
No 211
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.19 E-value=3.8e-06 Score=63.73 Aligned_cols=53 Identities=8% Similarity=0.134 Sum_probs=41.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh---HHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV---ESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~---~~~~~~~~~~ 235 (276)
.|++++|+|| ++|||+|+...|.|.++++++. ..|+.++++.. .....+.+++
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~ 83 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQLNDLQAFRSRY 83 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGHHHHHHHHHHH
T ss_pred CCCeEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcHHHHHHHHHHc
Confidence 4789999999 9999999999999999988763 45677766643 3344555666
No 212
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.18 E-value=2.4e-06 Score=64.27 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=40.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVE 226 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~ 226 (276)
+|++++|.|| +.||++|....|.|.++++++. ++.++.|+.|...
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~ 69 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVS 69 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTH
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCH
Confidence 5789999999 9999999999999999999874 6999999998643
No 213
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.18 E-value=1.7e-06 Score=67.28 Aligned_cols=45 Identities=9% Similarity=-0.001 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++++++|.|| ++||++|+...|.|+++++++.+ ++.++.|+.|..
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~ 83 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN 83 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 5789999999 99999999999999999998854 499999998753
No 214
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.17 E-value=1.7e-06 Score=69.22 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=47.8
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVD 250 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D 250 (276)
+++++||.|| +.||++|+...|.|.++++++ .++.++.|+.|... ...+++.- .++|.-++.+
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~---~l~~~~~v---~~~Pt~~~~~ 93 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVP---EVSEKYEI---SSVPTFLFFK 93 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSH---HHHHHTTC---CSSSEEEEEE
T ss_pred CCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCH---HHHHHcCC---CCCCEEEEEE
Confidence 5899999999 999999999999999999987 47999999998643 23444411 1445555544
No 215
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.17 E-value=2e-06 Score=66.62 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+++++||.|| ++||++|....|.|.++++++ .++.++.|+.|..
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~ 79 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNN 79 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTC
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCC
Confidence 6789999999 999999999999999999988 4699999999854
No 216
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.17 E-value=2.4e-06 Score=62.44 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=39.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++++++|.|| ++|||+|....+.|.++.+++.+ +.++.|+.|..
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~ 58 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN 58 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC
T ss_pred cCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC
Confidence 5789999999 99999999999999999998854 99999998864
No 217
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.17 E-value=4.9e-07 Score=76.24 Aligned_cols=65 Identities=9% Similarity=-0.032 Sum_probs=50.4
Q ss_pred CCCcEEecCCCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChH
Q psy1172 159 LPGCSLLGCQASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVE 226 (276)
Q Consensus 159 aPdF~L~~~~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~ 226 (276)
.+++.+.+.++..+... ..+++++||.|| ++||++|....|.+.++++++.+ .+.++.|+.|...
T Consensus 94 ~~~~~v~~l~~~~f~~~-~~~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~ 158 (210)
T 3apq_A 94 DDDPEIITLERREFDAA-VNSGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDR 158 (210)
T ss_dssp TTCTTSEECCHHHHHHH-HHHSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH
T ss_pred CCCCceEEecHHHHHHH-HccCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccH
Confidence 35555556665544433 246899999999 99999999999999999999854 4899999987643
No 218
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.16 E-value=2.9e-06 Score=62.78 Aligned_cols=52 Identities=6% Similarity=0.046 Sum_probs=43.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++++++|.|| +.|||+|....|.|+++.+++.+ .+.++.|+.|... ...+++
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~ 71 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQ---KIADKY 71 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCH---HHHHHT
T ss_pred cCCeEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCH---HHHHhc
Confidence 4899999999 99999999999999999999864 5899999988543 334455
No 219
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.16 E-value=2.5e-06 Score=69.29 Aligned_cols=45 Identities=11% Similarity=0.206 Sum_probs=39.8
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++|||.|| |+||++|+...|-|.++.+++.+ .+.++-|++|..
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~ 84 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV 84 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC
Confidence 4689999999 99999999999999999999843 378999999854
No 220
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.15 E-value=2.8e-06 Score=63.49 Aligned_cols=44 Identities=14% Similarity=0.239 Sum_probs=39.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++||++|....+.|+++.+++. ++.++.|+.|..
T Consensus 25 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 68 (113)
T 1ti3_A 25 SQKLIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDEL 68 (113)
T ss_dssp SSSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTC
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcccc
Confidence 5899999999 9999999999999999998874 799999998854
No 221
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.14 E-value=1.6e-05 Score=72.21 Aligned_cols=45 Identities=4% Similarity=-0.030 Sum_probs=38.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhC-CcEEEEEeCCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQR-TCKVIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~-gv~Vv~VS~D~ 224 (276)
.+++++|.|| +.||++|+..+|.+.+++++|+++ ++.++.|..+.
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~ 311 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 311 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT
T ss_pred CCCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc
Confidence 5789999999 999999999999999999999765 46677776653
No 222
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.14 E-value=3.6e-06 Score=66.15 Aligned_cols=52 Identities=10% Similarity=-0.009 Sum_probs=43.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.++++||.|| +.||++|+...|.|.++++++.+ .+.++.|+.|... ...+++
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~---~l~~~~ 74 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNP---WTAEKY 74 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCH---HHHHHH
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCH---hHHHHC
Confidence 4789999999 99999999999999999999965 4999999988643 334455
No 223
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.14 E-value=2.8e-06 Score=63.98 Aligned_cols=44 Identities=11% Similarity=0.146 Sum_probs=39.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| +.|||+|+...|.|+++.+++. ++.++.|+.|..
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~ 70 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDEL 70 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccC
Confidence 4889999999 9999999999999999999884 799999998853
No 224
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.14 E-value=3.2e-06 Score=62.89 Aligned_cols=52 Identities=8% Similarity=0.105 Sum_probs=43.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| +.||++|+...|.|.++.+++.+ .+.++.|+.|... ...+++
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~---~l~~~~ 72 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEK---TLFQRF 72 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCH---HHHHHT
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcCh---hHHHhc
Confidence 5789999999 99999999999999999999854 5999999998643 334455
No 225
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.13 E-value=1.7e-06 Score=66.56 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=39.1
Q ss_pred CCCCeEEEEEEcCC-------CCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 178 IPAFWGILFSHPSD-------FTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 178 ~~gk~vvL~f~pa~-------~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
.+|++++|.|| ++ |||+|+...|.|.++++++.+ ++.++.|+++
T Consensus 22 ~~~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 22 HNGKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp TTTSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred hCCCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 35899999999 99 999999999999999888743 6999999995
No 226
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.11 E-value=1.5e-06 Score=68.00 Aligned_cols=53 Identities=17% Similarity=0.240 Sum_probs=41.6
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh------HHHHHHHHHH
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV------ESHHDWIKAL 235 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~------~~~~~~~~~~ 235 (276)
+++ +++|+|| ++||++|+.++|.|.++++++. +.++.|+.++. .......+++
T Consensus 30 ~~~-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~ 88 (135)
T 3emx_A 30 LQG-DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKA 88 (135)
T ss_dssp HTS-SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred hCC-cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHc
Confidence 345 9999999 9999999999999999988874 88999988543 3334445555
No 227
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.10 E-value=4.6e-06 Score=61.51 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| +.|||+|....+.|.++.+++.+ ++.++.|+.|..
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 61 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDEN 61 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCC
Confidence 4789999999 99999999999999999998854 599999998754
No 228
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=3.4e-06 Score=64.92 Aligned_cols=76 Identities=11% Similarity=0.022 Sum_probs=50.7
Q ss_pred EEecccCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEe
Q psy1172 172 VILECSIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLS 248 (276)
Q Consensus 172 v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l 248 (276)
+.++ ..+||++||.|| ++|||+|+...+.+ .++.+.+ ..++.++.|+.|... ...+.+++.-. ++|..++
T Consensus 20 ~~~~-~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~~~-~~~~~~~~~v~---~~Pt~~~ 92 (130)
T 2kuc_A 20 LKRA-EVEDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEKGE-GVELRKKYGVH---AYPTLLF 92 (130)
T ss_dssp HHHH-HHHSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSSTT-HHHHHHHTTCC---SSCEEEE
T ss_pred HHHH-HhcCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCCcc-hHHHHHHcCCC---CCCEEEE
Confidence 4444 457899999999 99999999999998 5555444 345788888877421 23445555211 4566666
Q ss_pred eCCcch
Q psy1172 249 VDDFKE 254 (276)
Q Consensus 249 ~D~~~~ 254 (276)
.|.++.
T Consensus 93 ~d~~G~ 98 (130)
T 2kuc_A 93 INSSGE 98 (130)
T ss_dssp ECTTSC
T ss_pred ECCCCc
Confidence 665554
No 229
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.08 E-value=3.1e-06 Score=71.99 Aligned_cols=45 Identities=11% Similarity=0.099 Sum_probs=40.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+++++||.|| ++||++|+..+|.|.++++++.++ +.++.|+.|..
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~ 73 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQN 73 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTC
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCC
Confidence 5789999999 999999999999999999998654 89999999854
No 230
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.08 E-value=2.5e-06 Score=63.43 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=42.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhC--CcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQR--TCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~--gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++++++|.|| ++||++|+...|.|.++.+++... ++.++.|+.|... ...+++
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~ 74 (111)
T 3uvt_A 20 AEGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER---NICSKY 74 (111)
T ss_dssp HSSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH---HHHHHT
T ss_pred cCCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH---hHHHhc
Confidence 4789999999 999999999999999998887543 6888899887543 334555
No 231
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.07 E-value=2.8e-06 Score=66.62 Aligned_cols=44 Identities=16% Similarity=0.335 Sum_probs=38.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+|+++||.|| ++||++|+...|.|.++++++ .++.++.|+.+..
T Consensus 29 ~~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~ 72 (135)
T 2dbc_A 29 KDLWVVIHLY-RSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC 72 (135)
T ss_dssp SSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC
Confidence 4579999999 999999999999999999987 4688889988753
No 232
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.07 E-value=5.3e-06 Score=62.76 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| +.||++|+...+.|.++.+++.. ++.++.|+.|..
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 73 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN 73 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 4789999999 99999999999999999998854 599999999854
No 233
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.02 E-value=7.5e-06 Score=70.42 Aligned_cols=67 Identities=9% Similarity=0.026 Sum_probs=49.2
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh--CCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ--RTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVD 250 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~--~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D 250 (276)
.+++++|.|| ++||++|+..+|.+.++++++.+ .++.++.|+.+... ..+.++++.-. ++|.-++.+
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-~~~l~~~~~v~---~~Pt~~~~~ 97 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET-NSAVCRDFNIP---GFPTVRFFX 97 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT-THHHHHHTTCC---SSSEEEEEC
T ss_pred CCCeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh-hHHHHHHcCCC---ccCEEEEEe
Confidence 4589999999 99999999999999999999976 47999999985322 23445555211 445444444
No 234
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.02 E-value=6.4e-06 Score=68.88 Aligned_cols=85 Identities=7% Similarity=0.057 Sum_probs=50.2
Q ss_pred CCCCceEEEe---CccHHHHHhCCCCCC--C---CCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIAD---QDRSLAVQLGMLDPV--E---KDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fpllsD---~~~~va~~yG~~~~~--~---~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.+++|+.+.+ ..+++++.||+.... . .....+. ..+++||||++|+|+..+....+.....++|.+.|+++
T Consensus 103 ~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~-~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 103 FHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVD-HSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSY 181 (200)
T ss_dssp SCTTCEEEECCHHHHHHHHHHTTC--------------CTT-TCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHC
T ss_pred cCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceee-ecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5588998874 467899999986211 0 0000011 34799999999999999876666666678888888888
Q ss_pred cccccCCCCcCCCCC
Q psy1172 89 QLTDTKKVATPVDWK 103 (276)
Q Consensus 89 q~~~~~~~~~p~~w~ 103 (276)
+. ......|+++|-
T Consensus 182 ~~-~~~~~~~~~~~~ 195 (200)
T 2b7k_A 182 VP-AEQRAKQKEAWY 195 (200)
T ss_dssp CC-C-----------
T ss_pred hh-hhhcchhHHHHH
Confidence 74 456678899985
No 235
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.99 E-value=4.5e-06 Score=62.74 Aligned_cols=43 Identities=12% Similarity=0.174 Sum_probs=37.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
++++++|.|| ++|||+|....|.|.++.+++. ++.++.|+.+.
T Consensus 18 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~ 60 (110)
T 2l6c_A 18 GLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA 60 (110)
T ss_dssp TCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG
T ss_pred cCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC
Confidence 5789999999 9999999999999999888763 68899988764
No 236
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=97.98 E-value=3.3e-05 Score=58.76 Aligned_cols=56 Identities=23% Similarity=0.221 Sum_probs=46.8
Q ss_pred CCC-CceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKL-PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l-~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.++ +||++.|.++++++.||+. + .+++||||++|+|+..+... .+.+++.+.|++|
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l 137 (138)
T 4evm_A 81 LDYKNLPVLVDPSGKLLETYGVR--------S----YPTQAFIDKEGKLVKTHPGF----MEKDAILQTLKEL 137 (138)
T ss_dssp CCCTTCCEEECTTCHHHHHTTCC--------S----SSEEEEECTTCCEEEEEESC----CCHHHHHHHHHHC
T ss_pred cCCCCeeEEECcchHHHHHcCcc--------c----CCeEEEECCCCcEEEeecCC----CcHHHHHHHHHhh
Confidence 456 9999999999999999974 3 36999999999999988743 3578888888876
No 237
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.21 E-value=1e-06 Score=68.03 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=51.5
Q ss_pred CCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeE
Q psy1172 169 ASLVILECSIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLI 245 (276)
Q Consensus 169 G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
.+.+.+. ..+||++||+|| ++||++|+...|.+ .++.+.+.. ++.++.|+.|..+ ...+.+.+.-. ++|.
T Consensus 9 ~~~~~~~-~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~-~~~~~~~~~v~---~~Pt 81 (130)
T 2lst_A 9 PEALALA-QAHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPE-GQELARRYRVP---GTPT 81 (130)
Confidence 4455666 568899999999 99999999999999 777777643 5788888875432 23344444111 3455
Q ss_pred EEeeCC
Q psy1172 246 NLSVDD 251 (276)
Q Consensus 246 ~~l~D~ 251 (276)
-++.|.
T Consensus 82 ~~~~d~ 87 (130)
T 2lst_A 82 FVFLVP 87 (130)
Confidence 555553
No 238
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.96 E-value=9.5e-06 Score=57.33 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=37.3
Q ss_pred CeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 181 FWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 181 k~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.++++.|| ++|||+|+...|.|+++++++. .++.++.|+.|..
T Consensus 3 ~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~ 45 (85)
T 1fo5_A 3 KVKIELFT-SPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVMEN 45 (85)
T ss_dssp CEEEEEEE-CCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSSS
T ss_pred ceEEEEEe-CCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCCC
Confidence 46889999 9999999999999999998875 4699999998753
No 239
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.19 E-value=1.1e-06 Score=64.44 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=38.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| +.|||+|....+.++++.+++.+ ++.++.|+.|..
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 62 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN 62 (106)
Confidence 4789999999 99999999999999999998864 588888887743
No 240
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=97.94 E-value=3.9e-05 Score=60.67 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=47.5
Q ss_pred CCCCceEEEeCcc-----HHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDR-----SLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~-----~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|.++ ++++.||+. ++ +++||||++|+|+..+.... +.+++.+.|++|-
T Consensus 90 ~~~~~~~~~d~~~~~~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 151 (158)
T 3eyt_A 90 YRIKFPVGVDQPGDGAMPRTMAAYQMR--------GT----PSLLLIDKAGDLRAHHFGDV----SELLLGAEIATLL 151 (158)
T ss_dssp TTCCSCEEEECCCSSSSCHHHHHTTCC--------SS----SEEEEECTTSEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred cCCCceEEEcCccchhhHHHHHHcCCC--------CC----CEEEEECCCCCEEEEEeCCC----CHHHHHHHHHHHh
Confidence 5689999999998 799999984 33 59999999999999887543 4788888888774
No 241
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.94 E-value=1.3e-05 Score=62.64 Aligned_cols=44 Identities=14% Similarity=0.149 Sum_probs=38.2
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
++.+||.|| +.||++|....|.|+++++++.+ ++.++.|+.|..
T Consensus 50 ~~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~ 93 (140)
T 1v98_A 50 APLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH 93 (140)
T ss_dssp CCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred CCCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC
Confidence 444999999 99999999999999999999864 599999998854
No 242
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.90 E-value=3.2e-06 Score=63.52 Aligned_cols=45 Identities=2% Similarity=0.048 Sum_probs=38.4
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhC--CcEEEEEeCCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQR--TCKVIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~--gv~Vv~VS~D~ 224 (276)
++++++|.|| +.||++|....|.|.+++++++.. .+.++.|..+.
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 5789999999 999999999999999999998764 46777777654
No 243
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.89 E-value=4.7e-05 Score=60.22 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=47.1
Q ss_pred CCCCceEEEeCccH------HHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRS------LAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~------va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|.++. +++.||+. ++ +++||||++|+|+..+.... +.+++.+.|+.|-
T Consensus 92 ~~~~~~~~~d~~~~~~~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 154 (160)
T 3lor_A 92 FGIKFPVAVDMPREGQRIPSTMKKYRLE--------GT----PSIILADRKGRIRQVQFGQV----DDFVLGLLLGSLL 154 (160)
T ss_dssp TTCCSCEEEECCCTTCSSCHHHHHTTCC--------SS----SEEEEECTTSBEEEEEESCC----CHHHHHHHHHHHH
T ss_pred cCCCCcEEECCccccchhhhHHHhcccC--------cc----ceEEEECCCCcEEEEecCcC----CHHHHHHHHHHHH
Confidence 45899999999998 99999984 33 69999999999999887544 4778888887764
No 244
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.89 E-value=5e-05 Score=59.64 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=47.6
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||++.|.++++++.||+. + .+++||||++|+|+..+.... +.+++.+.|++|.
T Consensus 81 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~G~~----~~~~l~~~l~~ll 137 (151)
T 2f9s_A 81 YGVNFPVVLDTDRQVLDAYDVS--------P----LPTTFLINPEGKVVKVVTGTM----TESMIHDYMNLIK 137 (151)
T ss_dssp HTCCSCEEEETTSHHHHHTTCC--------S----SCEEEEECTTSEEEEEEESCC----CHHHHHHHHHHHS
T ss_pred cCCCceEEECCchHHHHhcCCC--------C----CCeEEEECCCCcEEEEEeCCC----CHHHHHHHHHHHH
Confidence 3489999999999999999974 3 369999999999998876332 5889999998875
No 245
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.89 E-value=4.3e-05 Score=60.09 Aligned_cols=62 Identities=16% Similarity=0.285 Sum_probs=48.1
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTD 92 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~ 92 (276)
.+++||++.|.++.+++.||+. + .+++||||++|+|+..+..... .+..++.+.|++|....
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 84 TGFTLPVLLDADKRVGKLYGTT--------G----VPETFVIDRHGVILKKVVGAME--WDHPEVIAFLNNELSKA 145 (154)
T ss_dssp HCCCCCEEECTTCHHHHHHTCC--------S----BCEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTC----
T ss_pred cCCCeeEEecCchHHHHHhCCC--------C----CCeEEEECCCCcEEEEEcCCCc--cccHHHHHHHHHHHHHh
Confidence 3489999999999999999984 3 3589999999999998874432 35688999998887544
No 246
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.88 E-value=1.3e-05 Score=71.47 Aligned_cols=54 Identities=11% Similarity=0.179 Sum_probs=43.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| +.||++|+..+|.|.++++++.+. +.|+.|++|.... .+.++++
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~~-~~l~~~~ 87 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNKN-KALCAKY 87 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTTT-HHHHHHT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCccC-HHHHHhC
Confidence 4789999999 999999999999999999998654 8999999984322 3445555
No 247
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.86 E-value=3e-06 Score=65.03 Aligned_cols=45 Identities=11% Similarity=0.097 Sum_probs=39.9
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..+++++|.|| +.||++|+...+.|.++.+++. ++.++.|+.|..
T Consensus 34 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 78 (130)
T 1wmj_A 34 EAGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL 78 (130)
T ss_dssp TTTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS
T ss_pred hcCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch
Confidence 35899999999 9999999999999999999884 789999988753
No 248
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.84 E-value=1.9e-05 Score=75.96 Aligned_cols=67 Identities=6% Similarity=-0.011 Sum_probs=50.0
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh--CCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ--RTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVD 250 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~--~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D 250 (276)
.+++++|+|| ++||++|+..+|.+.++++++++ .++.++.|+.|..+ ..+.++++.- .+++.-++.+
T Consensus 29 ~~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~-~~~l~~~~~V---~~~PTl~~f~ 97 (519)
T 3t58_A 29 SSSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET-NSAVCREFNI---AGFPTVRFFQ 97 (519)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG-GHHHHHHTTC---CSBSEEEEEC
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc-cHHHHHHcCC---cccCEEEEEc
Confidence 4689999999 99999999999999999999976 36899999986422 2344555521 1445445545
No 249
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.83 E-value=1.1e-05 Score=57.08 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=36.2
Q ss_pred eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 182 ~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
..|+.|| ++|||+|+...|.|+++.+++.+ ++.++.|+.|..
T Consensus 3 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~ 44 (85)
T 1nho_A 3 VNIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD 44 (85)
T ss_dssp CCEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC
T ss_pred EEEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 3578889 99999999999999999999853 689999998753
No 250
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.81 E-value=1.2e-05 Score=69.99 Aligned_cols=43 Identities=12% Similarity=0.086 Sum_probs=38.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
++++|||.|| ++||++|+...|.|.+++++|. ++.++.|+.+.
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~ 174 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN 174 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 5889999999 9999999999999999999984 58899988753
No 251
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=97.79 E-value=0.00011 Score=57.44 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=49.1
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||++.|.++++++.||+. + .+++||||++|+|+..+... ...+.+++.+.|+++.
T Consensus 83 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~--~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 83 VPAEFTVAFDPKGQTPRLYGVK--------G----MPTSFLIDRNGKVLLQHVGF--RPADKEALEQQILAAL 141 (152)
T ss_dssp SCCCSEEEECTTCHHHHHTTCC--------S----SSEEEEECTTSBEEEEEESC--CTTTHHHHHHHHHHHT
T ss_pred cCCCCceeECCcchhHHHcCCC--------C----CCeEEEECCCCCEEEEEccC--CCcCHHHHHHHHHHHH
Confidence 4589999999999999999984 3 36999999999999988743 2346789999998876
No 252
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.78 E-value=0.0001 Score=56.35 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=46.3
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++++||++.|.+.++++.||+. + .+++||||++|+|+ .+.+ .....+.+++.+.|+++
T Consensus 77 ~~~~~~~~~d~~~~~~~~~~i~--------~----~P~~~lid~~G~i~-~~~~-~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 77 YNLNFTNLNDADGVIWARYNVP--------W----QPAFVFYRADGTST-FVNN-PTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HTCCSEEEECTTSHHHHHTTCC--------S----SSEEEEECTTSCEE-EECC-SSSCCCHHHHHHHHHHC
T ss_pred cCCCceEEECCchhHHHhcCCC--------C----CCEEEEECCCCcEE-EEEc-CCCccCHHHHHHHHHHH
Confidence 3489999999999999999974 3 36999999999999 5552 22334789999998875
No 253
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.76 E-value=2.2e-05 Score=64.74 Aligned_cols=76 Identities=8% Similarity=-0.066 Sum_probs=47.2
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHH-H--HHHHHHHHhCCcEEEEEeCCC-hHHHHHHHHHHHh-cccCCeeEEEeeCC
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELAR-V--LQLIKEFEQRTCKVIALSCDS-VESHHDWIKALVR-DCILGLLINLSVDD 251 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~-l--~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~~~~~~~-~~~~~~~~~~l~D~ 251 (276)
..+||+|+|.|| ++||++|+...+. | .++.+.+.+ ++.++.|..|. ++..+.+.+.... .+..++|..++.+.
T Consensus 36 ~~~~KpVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~ 113 (173)
T 3ira_A 36 RKENKPVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTP 113 (173)
T ss_dssp HHHTCCEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECT
T ss_pred HHhCCCEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECC
Confidence 346899999999 9999999997662 2 334444433 57778888774 3333333221110 01226688888787
Q ss_pred cch
Q psy1172 252 FKE 254 (276)
Q Consensus 252 ~~~ 254 (276)
++.
T Consensus 114 dG~ 116 (173)
T 3ira_A 114 GKK 116 (173)
T ss_dssp TSC
T ss_pred CCC
Confidence 665
No 254
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=97.76 E-value=7.3e-05 Score=59.39 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=49.5
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQL 90 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~ 90 (276)
.+++||++.|.++++++.||+. + .+++||||++|+|+..+... ...+..++++.+.+++.
T Consensus 93 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~G~--~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 93 APVSFNFLSDATGQVQQRYGAN--------R----LPDTFIVDRKGIIRQRVTGG--IEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp CCCSCEEEECTTSHHHHHTTCC--------S----SSEEEEECTTSBEEEEEESC--CCTTSHHHHHHHHTTC-
T ss_pred cCCCceEEECchHHHHHHhCCC--------C----cceEEEEcCCCCEEEEEeCC--CccchHHHHHHHHhhcc
Confidence 5689999999999999999985 3 36999999999999998744 34567888888887763
No 255
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.75 E-value=6.9e-05 Score=61.15 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=49.5
Q ss_pred CCC-CceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKL-PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l-~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+++ .||++.|+++++++.||+..... ..+++||||++|+|++.+.... ..+.+++++.|++|.
T Consensus 116 ~~~~~~~~~~d~~~~~~~~~~~~~~~~--------~~P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 116 ANLTRLGYFNDQKAKVFQDLKAIGRAL--------GMPTSVLVDPQGCEIATIAGPA--EWASEDALKLIRAAT 179 (186)
T ss_dssp TTCCTTCCEECTTCHHHHHHHTTTCCS--------SSSEEEEECTTSBEEEEEESCC--CTTSHHHHHHHHHHH
T ss_pred cCCCCCceEECCcchHHHHhccccccC--------CCCEEEEECCCCCEEEEEecCC--ccCHHHHHHHHHHHh
Confidence 347 59999999999999999863211 2479999999999999987543 345788988888875
No 256
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.74 E-value=2.5e-05 Score=60.19 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=37.7
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
+++|||.|| +.||++|+.-.|.|.++.++|. ++.++-|++|.
T Consensus 23 ~~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 23 DVWVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp TCEEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred CCeEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 459999999 9999999999999999999883 58999998875
No 257
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.72 E-value=6.7e-05 Score=64.82 Aligned_cols=47 Identities=13% Similarity=-0.039 Sum_probs=40.4
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh---CCcEEEEEeCCC
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ---RTCKVIALSCDS 224 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~---~gv~Vv~VS~D~ 224 (276)
+++|+.+|++|| +.|||+|+...|.|++++.++.. .++.+..|..+.
T Consensus 135 ~~~~~~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~ 184 (243)
T 2hls_A 135 SLKGRVHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE 184 (243)
T ss_dssp HCCSCEEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT
T ss_pred HcCCCcEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc
Confidence 356788899999 99999999999999999999853 578888888764
No 258
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.72 E-value=4.8e-05 Score=64.08 Aligned_cols=44 Identities=11% Similarity=-0.019 Sum_probs=37.5
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh---CCcEEEEEeCCC
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ---RTCKVIALSCDS 224 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~---~gv~Vv~VS~D~ 224 (276)
++.++|.|| ++||++|+...|.++++++++.+ .++.++.|+.|.
T Consensus 134 ~~~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~ 180 (226)
T 1a8l_A 134 QDVRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE 180 (226)
T ss_dssp SCEEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG
T ss_pred CCcEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc
Confidence 344499999 99999999999999999999974 368899998774
No 259
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.71 E-value=7e-05 Score=60.17 Aligned_cols=70 Identities=10% Similarity=0.202 Sum_probs=49.8
Q ss_pred CCCCc---eEEEeCccHHHHHhCC-----CCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPY---PIIADQDRSLAVQLGM-----LDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~f---pllsD~~~~va~~yG~-----~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++++| |+++|+++++++.|++ .........++. ...++||||++|+|++.+..... .+.+++++.|++|
T Consensus 94 ~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~l 170 (174)
T 1xzo_A 94 YPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVI-HQSSFYLVGPDGKVLKDYNGVEN--TPYDDIISDVKSA 170 (174)
T ss_dssp SCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCC-SCCEEEEECTTSEEEEEEESSSS--CCHHHHHHHHHHH
T ss_pred cCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeee-eeeEEEEECCCCeEEEEEcCCCC--CCHHHHHHHHHHH
Confidence 66899 9999999999988864 111100001221 35689999999999999875432 4689999999887
Q ss_pred c
Q psy1172 89 Q 89 (276)
Q Consensus 89 q 89 (276)
.
T Consensus 171 l 171 (174)
T 1xzo_A 171 S 171 (174)
T ss_dssp T
T ss_pred H
Confidence 5
No 260
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.71 E-value=5.1e-05 Score=61.89 Aligned_cols=55 Identities=24% Similarity=0.337 Sum_probs=42.4
Q ss_pred CCCCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHh
Q psy1172 17 GKLPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDS 87 (276)
Q Consensus 17 ~~l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~ 87 (276)
.+++|| +++|.++++++.||+. + .+++||||++|+|++.+....+ .+++.+.|++
T Consensus 109 ~~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~~~----~~~l~~~l~~ 164 (176)
T 3kh7_A 109 LHNPYLLSISDADGTLGLDLGVY--------G----APETYLIDKQGIIRHKIVGVVD----QKVWREQLAP 164 (176)
T ss_dssp TTCCCSEEEEETTCHHHHHHTCC--------S----SCEEEEECTTCBEEEEEESCCC----HHHHHHHTHH
T ss_pred cCCCCceEEECCcchHHHHcCCC--------C----CCeEEEECCCCeEEEEEcCCCC----HHHHHHHHHH
Confidence 458898 5999999999999985 3 3699999999999998875544 4454444443
No 261
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=7.9e-05 Score=58.57 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=43.9
Q ss_pred CCCCceEEEeC---ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIADQ---DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fpllsD~---~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++++||++.|. ++++++.||+. + .+++||||++|+|+..+. +.+++.+.|++|
T Consensus 91 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~~l 146 (150)
T 3fw2_A 91 DTLDWEQVCDFGGLNSEVAKQYSIY--------K----IPANILLSSDGKILAKNL-------RGEELKKKIENI 146 (150)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCC--------S----SSEEEEECTTSBEEEESC-------CHHHHHHHHHHH
T ss_pred hCCCceEEEcCcccchHHHHHcCCC--------c----cCeEEEECCCCEEEEccC-------CHHHHHHHHHHH
Confidence 45899999998 77999999985 3 369999999999998874 577777777765
No 262
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.70 E-value=0.00013 Score=56.30 Aligned_cols=53 Identities=17% Similarity=0.360 Sum_probs=43.4
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHH
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVL 85 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l 85 (276)
++++||++.|.++++++.||+. ..+++||||++|+|+..+.... +.+++.+.|
T Consensus 92 ~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l 144 (145)
T 3erw_A 92 NKLTFPIVLDSKGELMKEYHII------------TIPTSFLLNEKGEIEKTKIGPM----TAEQLKEWT 144 (145)
T ss_dssp TTCCSCEEECSSSHHHHHTTCC------------EESEEEEECTTCCEEEEEESCC----CHHHHHHHH
T ss_pred cCCceeEEEcCchhHHHhcCcC------------ccCeEEEEcCCCcEEEEEcCCc----CHHHHHHhh
Confidence 4589999999999999999974 2469999999999999887443 467776665
No 263
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.69 E-value=0.00016 Score=56.00 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=46.6
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|.++++++.||+. ++ +++||||++|+|+..+... .+.+++.+.|+.+-
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 88 HDITQPIFVDSDHALTDAFENE--------YV----PAYYVFDKTGQLRHFQAGG----SGMKMLEKRVNRVL 144 (148)
T ss_dssp TTCCSCEEECSSCHHHHHTCCC--------CS----SEEEEECTTCBEEEEEESC----STTHHHHHHHHHHH
T ss_pred cCCCcceEECCchhHHHHhCCC--------CC----CEEEEECCCCcEEEEecCC----CCHHHHHHHHHHHH
Confidence 4589999999999999999984 33 5999999999999887643 34678888887764
No 264
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.67 E-value=2.3e-05 Score=60.29 Aligned_cols=45 Identities=11% Similarity=0.080 Sum_probs=35.0
Q ss_pred CCCeEEEEEEcCCCCc--------------ccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTP--------------VCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp--------------~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.||+++|.|| ++||+ +|+...|.|+++++++.+ .+.++.|+.|..
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~ 78 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 78 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 5899999999 99999 999999999999998865 489999998854
No 265
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.67 E-value=3.5e-05 Score=72.71 Aligned_cols=46 Identities=4% Similarity=-0.000 Sum_probs=40.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhC-CcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQR-TCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~-gv~Vv~VS~D~~ 225 (276)
.+++++|+|| ++||++|+..+|.|.++++++++. ++.++.|..+..
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~ 415 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN 415 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS
T ss_pred CCCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch
Confidence 4899999999 999999999999999999999765 678888877643
No 266
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.67 E-value=9.6e-05 Score=51.18 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=30.8
Q ss_pred EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe
Q psy1172 183 GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS 221 (276)
Q Consensus 183 vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS 221 (276)
..|.|| ++||++|+...|.|+++.+++. ..+.++.|+
T Consensus 2 ~~v~f~-a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIY-GTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEEEE-CSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred cEEEEE-cCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 358899 8999999999999999988874 357777776
No 267
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.65 E-value=0.00011 Score=59.89 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=48.0
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|+++.+++.||.+.-. ..+++||||++|+|+..+.... +.+++.+.|+.|.
T Consensus 121 ~~~~~~~~~d~~~~~~~~~~~~~v~---------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ll 180 (183)
T 3lwa_A 121 NGLDYPSIYDPPFMTAASLGGVPAS---------VIPTTIVLDKQHRPAAVFLREV----TSKDVLDVALPLV 180 (183)
T ss_dssp TTCCSCEEECTTCGGGGGTTTCCTT---------CCSEEEEECTTSCEEEEECSCC----CHHHHHHHHHHHH
T ss_pred cCCCccEEECCcchHHHHhccCCCC---------CCCeEEEECCCCcEEEEEcCCC----CHHHHHHHHHHHH
Confidence 4589999999999999999854211 2468999999999999887443 5888888888763
No 268
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.63 E-value=0.00011 Score=57.74 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=46.1
Q ss_pred CCCCceEEEeCc---cHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccc
Q psy1172 17 GKLPYPIIADQD---RSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTD 92 (276)
Q Consensus 17 ~~l~fpllsD~~---~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~ 92 (276)
.+++||++.|.+ .++++.||... .+ .+++||||++|+|+..+.... +.+++.+.|+.|+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~v------~~----~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 78 TPVSYPIWRYTGANSRNFMKTYGNTV------GV----LPFTVVEAPKCGYRQTITGEV----NEKSLTDAVKLAHSKC 142 (151)
T ss_dssp SCCSSCEEEECCSCHHHHHHTTTCCS------CC----SSEEEEEETTTTEEEECCSCC----CHHHHHHHHHHHHTC-
T ss_pred cCCCCceEecCccchHHHHHHhCCcc------CC----CCEEEEECCCCcEEEEECCCC----CHHHHHHHHHHHHHHh
Confidence 459999999864 46888888310 13 369999999999988876443 5788999998887443
No 269
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=97.62 E-value=0.00014 Score=56.37 Aligned_cols=54 Identities=7% Similarity=0.205 Sum_probs=43.5
Q ss_pred CCCCceEEEeCccHHHH--HhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAV--QLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~--~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|.++.++. .||+. + .+++||||++|+|++. +.+.+++.+.|+.++
T Consensus 85 ~~~~~~~~~d~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~-------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 85 MPQGWIVGWNKAGDIRTRQLYDIR--------A----TPTIYLLDGRKRVILK-------DTSMEQLIDYLATQA 140 (142)
T ss_dssp SCTTCEEEECTTCHHHHTTCSCCC--------S----SSEEEEECTTCBEEEC-------SCCHHHHHHHHHC--
T ss_pred cCCCcceeeCCccchhhHHHcCCC--------C----CCeEEEECCCCCEEec-------CCCHHHHHHHHHHHc
Confidence 67999999999999987 88874 3 3699999999999772 356889988888765
No 270
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.61 E-value=0.00018 Score=56.31 Aligned_cols=57 Identities=14% Similarity=0.328 Sum_probs=47.5
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|.+.++++.||+. ++ +++||||++|+|+..+... .+.+++++.|+++-
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~i~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 84 YGLPFTVMYDADKAVGQAFGTQ--------VY----PTSVLIGKKGEILKTYVGE----PDFGKLYQEIDTAW 140 (153)
T ss_dssp TTCCSEEEECSSCHHHHHHTCC--------SS----SEEEEECSSSCCCEEEESS----CCHHHHHHHHHHHH
T ss_pred cCCCceEEcCchHHHHHHcCCC--------cc----CeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHHH
Confidence 4588999999999999999974 33 5999999999999887642 46889998888764
No 271
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.60 E-value=6.3e-07 Score=67.86 Aligned_cols=37 Identities=14% Similarity=0.066 Sum_probs=31.4
Q ss_pred EEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHH
Q psy1172 172 VILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEF 210 (276)
Q Consensus 172 v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~ 210 (276)
++|+ .+.++++||.|| ++|||+|+...|.|.++++++
T Consensus 5 ~~la-~~~~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 5 VGLA-AHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHH-HHHHHHTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred hHHH-HhcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHhC
Confidence 4555 567888999999 999999999999999887665
No 272
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=97.59 E-value=0.00019 Score=65.55 Aligned_cols=71 Identities=15% Similarity=0.152 Sum_probs=54.9
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCC
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKV 96 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~ 96 (276)
.+++||++.|.+.++++.||+. ..+++||||++|+|+..+.... +.+++.+.|++|......+.
T Consensus 142 ~~l~fpv~~D~~~~l~~~ygV~------------~~Pt~~lID~~G~Iv~~~~G~~----~~~~l~~~I~~lL~e~~~~~ 205 (352)
T 2hyx_A 142 LGISYPIALDNNYATWTNYRNR------------YWPAEYLIDATGTVRHIKFGEG----DYNVTETLVRQLLNDAKPGV 205 (352)
T ss_dssp HTCCSCEEECTTSHHHHHTTCC------------EESEEEEECTTSBEEEEEESBC----CHHHHHHHHHHHHHHHSTTC
T ss_pred cCCCccEEeCCcHHHHHHcCCC------------ccCEEEEEeCCCeEEEEEcCCC----CHHHHHHHHHHHHhhccCCC
Confidence 4589999999999999999984 2469999999999999987543 47888888888754444445
Q ss_pred CcCCCCC
Q psy1172 97 ATPVDWK 103 (276)
Q Consensus 97 ~~p~~w~ 103 (276)
..|+...
T Consensus 206 ~lpap~~ 212 (352)
T 2hyx_A 206 KLPQPSS 212 (352)
T ss_dssp CCCSCGG
T ss_pred CCCCCcc
Confidence 5666543
No 273
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.58 E-value=2.5e-05 Score=62.14 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=42.4
Q ss_pred CCCeEEEEEEcCCC--CcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDF--TPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~--cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++|||.|| +.| |++|+...|-|.++.++|.++.+.|+-|++|.. .+...++
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~---~~lA~~y 87 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS---EAIGDRF 87 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHH---HHHHHHH
T ss_pred CCCCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCC---HHHHHHc
Confidence 4578888888 999 999999999999999999654488988887743 3455666
No 274
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.58 E-value=1.6e-05 Score=64.05 Aligned_cols=74 Identities=15% Similarity=-0.061 Sum_probs=44.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHH--HHHHhCCcEEEEEeCC--ChHHHHHHHHHHHhcccCCeeEEEeeCCcch
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLI--KEFEQRTCKVIALSCD--SVESHHDWIKALVRDCILGLLINLSVDDFKE 254 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~--~~~~~~gv~Vv~VS~D--~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~ 254 (276)
.||+|+|.|| ++||++|+...|.+.+.- .++.+ ..++.|.+| +.... ..+ .+.++|.-++.+.++.
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~~~~~----~~~---~v~~~PT~~f~~~~G~ 112 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHETTDKN----LSP---DGQYVPRIMFVDPSLT 112 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCCSCGG----GCT---TCCCSSEEEEECTTSC
T ss_pred cCCcEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCchhhH----hhc---CCCCCCEEEEECCCCC
Confidence 5899999999 999999999999887642 22322 235555554 22211 112 1235676677676654
Q ss_pred hhhhhhhccc
Q psy1172 255 VEGRSRRFQE 264 (276)
Q Consensus 255 ~~~~a~~ygv 264 (276)
. +.+..|.
T Consensus 113 ~--v~~~~G~ 120 (151)
T 3ph9_A 113 V--RADIAGR 120 (151)
T ss_dssp B--CTTCCCS
T ss_pred E--EEEEeCC
Confidence 2 3444454
No 275
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.57 E-value=6.4e-05 Score=59.57 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=42.0
Q ss_pred CCeEEEEEEcCCCC--cccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 180 AFWGILFSHPSDFT--PVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 180 gk~vvL~f~pa~~c--p~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++++||.|| ++|| ++|+...|-|.++.++|.+ .+.|+-|++|... +...++
T Consensus 33 ~~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~---~la~~y 85 (137)
T 2qsi_A 33 GKIVVLFFR-GDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAER---GLMARF 85 (137)
T ss_dssp SSEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHH---HHHHHH
T ss_pred CCcEEEEEe-CCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCH---HHHHHc
Confidence 349999999 9999 9999999999999999854 4899999887543 445666
No 276
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.56 E-value=0.00031 Score=55.60 Aligned_cols=57 Identities=14% Similarity=0.175 Sum_probs=47.2
Q ss_pred CCCC-ceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLP-YPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~-fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++ ||++.|.+.++++.||+. ++ +++||||++|+|+..+... .+.+++.+.|+.+.
T Consensus 98 ~~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 98 LNYPKLPVVTDNGGTIAQNLNIS--------VY----PSWALIGKDGDVQRIVKGS----INEAQALALIRNPN 155 (164)
T ss_dssp SCCTTSCEEECTTCHHHHHTTCC--------SS----SEEEEECTTSCEEEEEESC----CCHHHHHHHHHCTT
T ss_pred CCCCcceEEEcCchHHHHHcCCC--------cc----ceEEEECCCCcEEEEEcCC----CCHHHHHHHHHHHH
Confidence 4677 999999999999999974 33 5999999999999987643 35888888888764
No 277
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.56 E-value=4.6e-05 Score=72.19 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=43.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhC-C------cEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQR-T------CKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~-g------v~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.++++||+|| ++||++|+..+|.+.++++++.+. + +.++.|+.|... +..+++
T Consensus 41 ~~k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~y 100 (470)
T 3qcp_A 41 PLCPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRKY 100 (470)
T ss_dssp GGSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHHT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHHc
Confidence 3479999999 999999999999999999998643 3 899999988542 344555
No 278
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.55 E-value=3.8e-05 Score=65.48 Aligned_cols=42 Identities=12% Similarity=0.017 Sum_probs=37.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
+|++|||.|| +.||++|+...|.|.+++++| .++.++.|+++
T Consensus 119 ~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~--~~v~f~~vd~~ 160 (217)
T 2trc_P 119 KVTTIVVNIY-EDGVRGCDALNSSLECLAAEY--PMVKFCKIRAS 160 (217)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTC--TTSEEEEEEHH
T ss_pred CCcEEEEEEE-CCCCccHHHHHHHHHHHHHHC--CCeEEEEEECC
Confidence 4689999999 999999999999999999988 36899999876
No 279
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=97.55 E-value=3e-05 Score=65.08 Aligned_cols=50 Identities=10% Similarity=0.120 Sum_probs=39.3
Q ss_pred CCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecC
Q psy1172 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP 71 (276)
Q Consensus 18 ~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~ 71 (276)
...+++|+|++++++++|||..... .|.....|.++||| ||+|++++.-+
T Consensus 132 ~~~i~~laD~~~eftkalGl~~~~~---~gg~RS~Rya~IVd-DGvV~~~~vE~ 181 (199)
T 4h86_A 132 TTHIKFASDPGCAFTKSIGFELAVG---DGVYWSGRWAMVVE-NGIVTYAAKET 181 (199)
T ss_dssp CSSEEEEECGGGHHHHHTTCEEEEE---TTEEEECSEEEEEE-TTEEEEEEECS
T ss_pred cccccccCCcchHHHHhcCceeecC---CCcceeeEEEEEEE-CCEEEEEEEeC
Confidence 4679999999999999999864322 12223679999999 99999999843
No 280
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.54 E-value=0.0001 Score=57.97 Aligned_cols=57 Identities=21% Similarity=0.233 Sum_probs=48.0
Q ss_pred CCCCceEEEe---CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIAD---QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD---~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||++.| .+.++++.||+. + .+++||||++|+|+..+.... +.+++.+.|+.+.
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 84 YPRFIPLLASDRDRPHEVAARFKVL--------G----QPWTFVVDREGKVVALFAGRA----GREALLDALLLAG 143 (154)
T ss_dssp CTTEEECBCCSSCCHHHHHTTSSBC--------S----SCEEEEECTTSEEEEEEESBC----CHHHHHHHHHHTT
T ss_pred cCCCcccccccccchHHHHHHhCCC--------c----ccEEEEECCCCCEEEEEcCCC----CHHHHHHHHHhcc
Confidence 6689999999 888999999974 3 369999999999999887433 4889999998876
No 281
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.54 E-value=0.0004 Score=52.71 Aligned_cols=55 Identities=22% Similarity=0.276 Sum_probs=44.5
Q ss_pred CCC-CceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKL-PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l-~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.++ +||++.|.+.++++.||+. ++ +++||||++|+|+ .+... .+.+++.+.|+++
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i~--------~~----P~~~~id~~g~i~-~~~g~----~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGVT--------QQ----PAYAFVDPHGNVD-VVRGR----MSQDELTRRVTAL 133 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTCC--------SS----SEEEEECTTCCEE-EEESC----CCHHHHHHHHHHH
T ss_pred cCCCceEEEEcCCcHHHHHcCCC--------CC----ceEEEECCCCCEE-EEecC----CCHHHHHHHHHHH
Confidence 347 9999999999999999974 33 5999999999998 66533 2478888888765
No 282
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=97.54 E-value=0.00014 Score=57.70 Aligned_cols=69 Identities=12% Similarity=0.020 Sum_probs=47.3
Q ss_pred CCCCceEEE---eCccHHHHHhCCCCCC-CCCCCC-C-CcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIA---DQDRSLAVQLGMLDPV-EKDSKG-M-PLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fplls---D~~~~va~~yG~~~~~-~~~~~g-~-~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||++. |..+++++.||+.... ..+..+ . ....+++||||++|+|+..+.... +.+++++.|++|.
T Consensus 86 ~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ll 160 (164)
T 2ggt_A 86 FSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK----RKGEIAASIATHM 160 (164)
T ss_dssp TCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC----CHHHHHHHHHHHH
T ss_pred cCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC----CHHHHHHHHHHHH
Confidence 558999994 6677899999985311 000000 0 012358999999999999886443 5788999888775
No 283
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.52 E-value=0.0001 Score=66.84 Aligned_cols=52 Identities=10% Similarity=0.079 Sum_probs=42.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHH-------HHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELAR-------VLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~-------l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++++++|.|| +.||+ |+..+|. ++++++++++.++.++.|+.+... +.++++
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~---~l~~~~ 85 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEA---KLAKKL 85 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTH---HHHHHH
T ss_pred hCCeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCH---HHHHhc
Confidence 4689999999 99999 9888888 888888887778999999987543 334455
No 284
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.52 E-value=0.0001 Score=69.93 Aligned_cols=53 Identities=6% Similarity=0.100 Sum_probs=45.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| +.||++|+...|.+.++++++++.++.++.|+.+... ..++++
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~---~l~~~~ 82 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ---DLCMEH 82 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH---HHHHHT
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCH---HHHHhc
Confidence 4789999999 9999999999999999999998778999999987543 344555
No 285
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.51 E-value=0.00013 Score=66.98 Aligned_cols=53 Identities=9% Similarity=0.052 Sum_probs=42.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh-----CCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ-----RTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~-----~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| +.||++|+...|.+.++++++++ .++.++.|+.+... ..++++
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~---~l~~~~ 78 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS---DIAQRY 78 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH---HHHHHT
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH---HHHHhc
Confidence 4789999999 99999999999999999999963 34888888887542 344555
No 286
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=97.51 E-value=0.00032 Score=55.99 Aligned_cols=71 Identities=7% Similarity=0.011 Sum_probs=48.9
Q ss_pred CCCCceEEEeCc---cHHHHHhCCCCCC-CCCCC-CC-CcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcc
Q psy1172 17 GKLPYPIIADQD---RSLAVQLGMLDPV-EKDSK-GM-PLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQL 90 (276)
Q Consensus 17 ~~l~fpllsD~~---~~va~~yG~~~~~-~~~~~-g~-~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~ 90 (276)
.+++|+++.|.. +++++.||+.... ..... +. ....+++||||++|+|+..+.... +.+++++.|++|..
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 89 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSR----SAEQISDSVRRHMA 164 (171)
T ss_dssp TCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSC----CHHHHHHHHHHHHH
T ss_pred cCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCC----CHHHHHHHHHHHHH
Confidence 558999999753 5899999986321 00000 00 013469999999999999987543 57889988888754
Q ss_pred c
Q psy1172 91 T 91 (276)
Q Consensus 91 ~ 91 (276)
.
T Consensus 165 ~ 165 (171)
T 2rli_A 165 A 165 (171)
T ss_dssp H
T ss_pred H
Confidence 3
No 287
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.43 E-value=0.00026 Score=55.66 Aligned_cols=53 Identities=15% Similarity=0.253 Sum_probs=41.1
Q ss_pred CCCceEEEeC---ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPIIADQ---DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpllsD~---~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+++||+++|+ +.++++.||+. + .+++||||++|+|+..+. . .+++.+.|++|.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~----~---~~~l~~~l~~l~ 140 (152)
T 2lrn_A 85 KSYWNQVLLQKDDVKDVLESYCIV--------G----FPHIILVDPEGKIVAKEL----R---GDDLYNTVEKFV 140 (152)
T ss_dssp TCCSEEEEECHHHHHHHHHHTTCC--------S----SCEEEEECTTSEEEEECC----C---TTHHHHHHHHHH
T ss_pred CCCCeEEecccchhHHHHHHhCCC--------c----CCeEEEECCCCeEEEeeC----C---HHHHHHHHHHHH
Confidence 4899999999 78999999984 3 369999999999998863 1 245556665554
No 288
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.42 E-value=0.00026 Score=54.83 Aligned_cols=55 Identities=13% Similarity=0.266 Sum_probs=43.3
Q ss_pred CCC-ceEEEeCccH--HHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLP-YPIIADQDRS--LAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~-fpllsD~~~~--va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+++ ||++.|+++. +++.||+. + .+++||||++|+|+..+... .+++++++.+..+
T Consensus 87 ~~~~~~~~~d~~~~~~~~~~~~i~--------~----~P~~~lid~~G~i~~~~~g~----~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 87 KIGGWLNVRDSKNHTDFKITYDIY--------A----TPVLYVLDKNKVIIAKRIGY----ENLDDFLVQYEKS 144 (148)
T ss_dssp TCTTSEEEECTTCCCCHHHHHCCC--------S----SCEEEEECTTCBEEEESCCG----GGHHHHHHHHHHH
T ss_pred CCCCceEEeccccchhHHHhcCcC--------C----CCEEEEECCCCcEEEecCCH----HHHHHHHHHHHHH
Confidence 377 9999999998 99999984 3 36999999999999876532 4577777766543
No 289
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.41 E-value=0.00036 Score=53.99 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=44.7
Q ss_pred CCCCceEEEeC---ccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQ---DRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~---~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++++||++.|. ++.+++.||+. ++ +++||||++|+|+.... +.+++.+.|+.+-
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~-------~~~~l~~~l~~ll 145 (148)
T 3fkf_A 89 DTLSWDQVCDFTGLSSETAKQYAIL--------TL----PTNILLSPTGKILARDI-------QGEALTGKLKELL 145 (148)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCC--------SS----SEEEEECTTSBEEEESC-------CHHHHHHHHHHHC
T ss_pred cCCCceEEEccCCcchHHHHhcCCC--------Cc----CEEEEECCCCeEEEecC-------CHHHHHHHHHHHH
Confidence 45899999998 78999999985 33 69999999999988764 6788888887763
No 290
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.40 E-value=0.00059 Score=53.41 Aligned_cols=56 Identities=16% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCCCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++++|| ++.|.+.++++.||+. ++ +++||||++|+|+..+.... +.+++.+.|+.+
T Consensus 94 ~~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~~id~~G~i~~~~~g~~----~~~~l~~~l~~~ 150 (156)
T 1kng_A 94 YGNPFGRVGVDANGRASIEWGVY--------GV----PETFVVGREGTIVYKLVGPI----TPDNLRSVLLPQ 150 (156)
T ss_dssp HCCCCSEEEEETTSHHHHHTTCC--------SS----CEEEEECTTSBEEEEEESCC----CHHHHHHTHHHH
T ss_pred cCCCCceeeeCchhHHHHhcCcC--------cc----CeEEEEcCCCCEEEEEeCCC----CHHHHHHHHHHH
Confidence 348999 9999999999999974 33 58999999999998876433 466776666654
No 291
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.39 E-value=0.00024 Score=54.30 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=40.7
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHH-HHHHHHH
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESH-HDWIKAL 235 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~-~~~~~~~ 235 (276)
+++++|+|+ ++|||+|+.-.|.|+++.++ .++.++-|.+|....+ .+.++++
T Consensus 24 ~~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~~Sn~IA~~~ 76 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERDLSDYIAKKT 76 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHHHHHHHHHHH
T ss_pred CCCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCchhhHHHHHHh
Confidence 789999999 99999999999999998874 4688899888754322 3344555
No 292
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.33 E-value=0.0002 Score=67.38 Aligned_cols=51 Identities=4% Similarity=-0.046 Sum_probs=42.7
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
+++++|.|| +.||++|+...|.+.++++++++. +.++.|+.+... ..++++
T Consensus 21 ~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~---~l~~~~ 71 (481)
T 3f8u_A 21 AGLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANT---NTCNKY 71 (481)
T ss_dssp SSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCH---HHHHHT
T ss_pred CCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCH---HHHHhc
Confidence 489999999 999999999999999999999765 888899887643 344555
No 293
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.32 E-value=0.00067 Score=54.08 Aligned_cols=56 Identities=25% Similarity=0.302 Sum_probs=42.7
Q ss_pred CCCCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.+++|| ++.|.++++++.||+. + .+++||||++|+|+..+.... +.+++.+.|+.+
T Consensus 102 ~~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~ 158 (168)
T 2b1k_A 102 LGNPYALSLFDGDGMLGLDLGVY--------G----APETFLIDGNGIIRYRHAGDL----NPRVWEEEIKPL 158 (168)
T ss_dssp HCCCCSEEEEETTCHHHHHHTCC--------S----SSEEEEECTTSBEEEEEESCC----CHHHHHHTTHHH
T ss_pred cCCCCceeeECcchHHHHHcCcc--------c----cCEEEEECCCCeEEEEEeCCC----CHHHHHHHHHHH
Confidence 348898 6899999999999985 3 369999999999998887433 356665555543
No 294
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.32 E-value=0.00018 Score=68.29 Aligned_cols=44 Identities=9% Similarity=0.127 Sum_probs=37.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHh--CCcEEEEEeCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQ--RTCKVIALSCD 223 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~--~gv~Vv~VS~D 223 (276)
.++++||.|| ++||++|+..+|.+.++++++.. .++.++.|..+
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 420 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT 420 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG
T ss_pred CCCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC
Confidence 4789999999 99999999999999999999973 35666676654
No 295
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.30 E-value=0.00025 Score=70.98 Aligned_cols=46 Identities=13% Similarity=0.018 Sum_probs=41.2
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
+.|++++|.|| ++||++|+..+|.|.+++++|++ ++.++.|+.+..
T Consensus 453 ~~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~ 498 (780)
T 3apo_A 453 SDKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIH 498 (780)
T ss_dssp TCCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred cCCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCC
Confidence 47899999999 99999999999999999999964 589999998754
No 296
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.30 E-value=0.00013 Score=58.35 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=48.9
Q ss_pred CCCCceEEEeCc---cHHHHHhCCCCCCCC----CCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIADQD---RSLAVQLGMLDPVEK----DSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fpllsD~~---~~va~~yG~~~~~~~----~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++++||+++|++ +++++.||+...... ...++. ..+++|||| +|+|++.+.... ..+.+++++.|++|
T Consensus 97 ~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~-~~P~~~lid-~G~i~~~~~g~~--~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 97 FHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVD-HTATTFVVK-EGRLVLLYSPDK--AEATDRVVADLQAL 171 (172)
T ss_dssp HCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEE-ECCCEEEEE-TTEEEEEECHHH--HTCHHHHHHHHHHC
T ss_pred hCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEe-cCCEEEEEE-CCEEEEEECCCC--CCCHHHHHHHHHHh
Confidence 348999999988 799999998643210 000111 357999999 999999887443 23688999988875
No 297
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=96.40 E-value=3.5e-05 Score=61.20 Aligned_cols=59 Identities=17% Similarity=0.277 Sum_probs=43.1
Q ss_pred CCCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 16 DGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 16 ~~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
..+++||++.|+++++++.||+... |+ +++||||++|+|+..+.. .+.+++.+.|++|+
T Consensus 89 ~~~~~~~~~~d~~~~~~~~~~~~~~------~~----P~~~lid~~G~i~~~~~g-----~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 89 STGVTYPLGLDPGADIFAKYALRDA------GI----TRNVLIDREGKIVKLTRL-----YNEEEFASLVQQIN 147 (159)
Confidence 3678999999999999999996311 33 489999999999987752 23444555555554
No 298
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=97.29 E-value=0.00038 Score=55.05 Aligned_cols=53 Identities=17% Similarity=0.286 Sum_probs=42.0
Q ss_pred CCCceEEEeCccH---HHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHH
Q psy1172 18 KLPYPIIADQDRS---LAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLD 86 (276)
Q Consensus 18 ~l~fpllsD~~~~---va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~ 86 (276)
+++||++.|.++. +++.||+. + .+++||||++|+|+..+.. ..+.++.+..+.
T Consensus 89 ~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g----~~~~e~~~~~~~ 144 (152)
T 2lrt_A 89 NLPWVCVRDANGAYSSYISLYNVT--------N----LPSVFLVNRNNELSARGEN----IKDLDEAIKKLL 144 (152)
T ss_dssp TCSSEEEECSSGGGCHHHHHHTCC--------S----CSEEEEEETTTEEEEETTT----CSCHHHHHHHHH
T ss_pred CCCceEEECCCCcchHHHHHcCcc--------c----CceEEEECCCCeEEEecCC----HHHHHHHHHHHH
Confidence 4899999999987 99999985 2 3699999999999887652 345777666553
No 299
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.29 E-value=0.00032 Score=59.17 Aligned_cols=42 Identities=5% Similarity=-0.062 Sum_probs=35.7
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
++.+++.|| +.||++|+...|.+++++.++ .++.++.|+.+.
T Consensus 136 ~~~~~v~F~-a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~ 177 (229)
T 2ywm_A 136 IPIEIWVFV-TTSCGYCPSAAVMAWDFALAN--DYITSKVIDASE 177 (229)
T ss_dssp SCEEEEEEE-CTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGG
T ss_pred CCeEEEEEE-CCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCC
Confidence 445588899 999999999999999999887 478888888764
No 300
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.28 E-value=0.00043 Score=58.51 Aligned_cols=45 Identities=9% Similarity=-0.040 Sum_probs=35.3
Q ss_pred EEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 172 VILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 172 v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
+.+. ...++++|+.|| +.|||+|++..+.|.++.+ .+++|+.+..
T Consensus 79 ~~~g-~~~~k~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 79 IVYK-APQEKHVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAF 123 (216)
T ss_dssp EEEC-CTTCCEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred eeec-CCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 3444 446889999999 9999999999999887653 4788877654
No 301
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.27 E-value=0.00052 Score=56.71 Aligned_cols=53 Identities=13% Similarity=0.241 Sum_probs=41.2
Q ss_pred CCCeEEEEEEcC-------CCCcccHHHHHHHHHHHHHHHh----CCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPS-------DFTPVCTTELARVLQLIKEFEQ----RTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa-------~~cp~C~~el~~l~~~~~~~~~----~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++.+|||.|| + .||++|+.-.|.|+++.++|.. ..+.+.-|.+|... +..+++
T Consensus 36 ~~~~vvV~F~-A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~---~la~~~ 99 (178)
T 3ga4_A 36 PGYFNILYIT-MRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP---QLVKDL 99 (178)
T ss_dssp TTCEEEEEEE-CCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH---HHHHHT
T ss_pred CCCcEEEEEe-CCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH---HHHHHc
Confidence 3568999999 6 5999999999999999999962 34788888888533 334555
No 302
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.27 E-value=0.00047 Score=54.86 Aligned_cols=54 Identities=19% Similarity=0.298 Sum_probs=42.8
Q ss_pred CC-CceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KL-PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l-~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++ +||++.| ++++++.||+. ++ +++||||++|+|+. .... .+.+++.+.|++|.
T Consensus 109 ~~~~~~~~~d-~~~~~~~~~v~--------~~----P~~~lid~~G~i~~--~g~~---~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 109 GDPSWIMVMD-DGSLVEKFNVR--------SI----DYIVIMDKSSNVLY--AGTT---PSLGELESVIKSVQ 163 (165)
T ss_dssp SCTTSEEEEC-CSHHHHHTTCC--------SS----SEEEEEETTCCEEE--EEES---CCHHHHHHHHHHC-
T ss_pred CCCCeeEEeC-hHHHHHHhCCC--------Cc----eEEEEEcCCCcEEE--eCCC---CCHHHHHHHHHHHh
Confidence 47 9999999 99999999975 33 59999999999999 2222 15788888888764
No 303
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.26 E-value=0.00036 Score=56.49 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=42.1
Q ss_pred CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhccc
Q psy1172 27 QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLT 91 (276)
Q Consensus 27 ~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~ 91 (276)
...+++++||+...... .++. ..+++|||||+|+|+.++. . ...+.++|++.|++++..
T Consensus 105 ~~~~~~~~~g~~~~~~~--~~~~-~~~~~~lID~~G~i~~~~~-g--~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 105 DLFKLLDAIDFRFMTAG--NDFI-HPNVVVVLSPELQIKDYIY-G--VNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHHHHHHTTCCCEEET--TEEE-CCCEEEEECTTSBEEEEEE-S--SSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCeEEecCC--Cccc-cCceEEEECCCCeEEEEEe-C--CCCCHHHHHHHHHHhhcc
Confidence 45789999987532110 0121 3578999999999999885 2 245699999999998743
No 304
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.26 E-value=0.00093 Score=52.76 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=46.3
Q ss_pred CCCCceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||++.|.+ ++++.|+..... |+. ..+++||||++|+|+..+.... +.+++.+.|+.+-
T Consensus 89 ~~~~~~~~~~~~-~~~~~~~~~~~~-----~i~-~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~l 150 (165)
T 3or5_A 89 QGIIYPVMMATP-ELIRAFNGYIDG-----GIT-GIPTSFVIDASGNVSGVIVGPR----SKADFDRIVKMAL 150 (165)
T ss_dssp HTCCSCEEECCH-HHHHHHHTTSTT-----CSC-SSSEEEEECTTSBEEEEECSCC----CHHHHHHHHHHHH
T ss_pred cCCCCceEecCH-HHHHHHhhhhcc-----CCC-CCCeEEEECCCCcEEEEEcCCC----CHHHHHHHHHHHH
Confidence 358999999976 999999765322 121 3579999999999998876433 4788888887763
No 305
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.17 E-value=0.00043 Score=69.18 Aligned_cols=45 Identities=4% Similarity=-0.011 Sum_probs=40.2
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
.+++++|.|| ++||++|+..+|.+.++++++++ ++.++.|+.+..
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~ 718 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAY 718 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCC
Confidence 4789999999 99999999999999999999965 589999998754
No 306
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.11 E-value=8.1e-05 Score=60.10 Aligned_cols=69 Identities=13% Similarity=0.156 Sum_probs=39.4
Q ss_pred CCCCceEEEeCc--cH-HHHHhCCCCCCCCCCCCCC--cccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIADQD--RS-LAVQLGMLDPVEKDSKGMP--LTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpllsD~~--~~-va~~yG~~~~~~~~~~g~~--~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||+++|.+ +. +++.||++.....+..++| .-.|++||||++|+|+..+.... +.+++.+.|++|.
T Consensus 94 ~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 167 (171)
T 3cmi_A 94 YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLT----KPSSLSETIEELL 167 (171)
T ss_dssp -CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTS----CGGGGHHHHHHHH
T ss_pred cCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCC----CHHHHHHHHHHHH
Confidence 679999999754 33 3333332211000001221 01459999999999999886433 3566666666653
No 307
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.06 E-value=0.00098 Score=53.77 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=36.9
Q ss_pred CeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe
Q psy1172 170 SLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS 221 (276)
Q Consensus 170 ~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS 221 (276)
....+. .-.++++|+.|| ..|||+|....+.|.++.+++.+ +.|+-+.
T Consensus 13 ~~~~~G-~~~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 13 NAPVLG-NPEGDVTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp TSCEEE-CTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCcC-CCCCCEEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 344555 557889999999 99999999999999999887643 5554443
No 308
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.99 E-value=0.00022 Score=56.51 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=29.7
Q ss_pred CeEEEEEEcCCC--CcccHHHHHHHHHHHHHHHhCCcE--EEEEeCCC
Q psy1172 181 FWGILFSHPSDF--TPVCTTELARVLQLIKEFEQRTCK--VIALSCDS 224 (276)
Q Consensus 181 k~vvL~f~pa~~--cp~C~~el~~l~~~~~~~~~~gv~--Vv~VS~D~ 224 (276)
+.+||+|| ++| |++|+..+|.|.+++++| .++. ++.|++|.
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~ 79 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQ 79 (142)
T ss_dssp CSEEEEEC-CCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHH
T ss_pred CCEEEEEE-CCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCC
Confidence 45677777 776 999999999999999998 3577 88888764
No 309
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=96.98 E-value=0.0013 Score=51.03 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=39.9
Q ss_pred CCCCc-eEEEeCc---cHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHh
Q psy1172 17 GKLPY-PIIADQD---RSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDS 87 (276)
Q Consensus 17 ~~l~f-pllsD~~---~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~ 87 (276)
.+++| ++++|.+ .++++.||+. + .+++||||++|+|+.... +.+++.+.|+.
T Consensus 87 ~~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~~ 142 (143)
T 4fo5_A 87 DKLDLSTQFHEGLGKESELYKKYDLR--------K----GFKNFLINDEGVIIAANV-------TPEKLTEILKA 142 (143)
T ss_dssp HTCCGGGEEECTTGGGSHHHHHTTGG--------G----CCCEEEECTTSBEEEESC-------CHHHHHHHHTC
T ss_pred hCCCCceeeecccccchHHHHHcCCC--------C----CCcEEEECCCCEEEEccC-------CHHHHHHHHHh
Confidence 34899 8999984 6899999984 2 369999999999988653 25666666654
No 310
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.95 E-value=0.0002 Score=53.77 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=29.1
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
.+++++++ || ++|||+|+...+.|+++.. .+.++-|+.+.
T Consensus 17 ~~~~~vv~-f~-a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~ 56 (116)
T 2e7p_A 17 ASSAPVVV-FS-KTYCGYCNRVKQLLTQVGA-----SYKVVELDELS 56 (116)
T ss_dssp HTSSSEEE-EE-CTTCHHHHHHHHHHHHHTC-----CCEEEEGGGST
T ss_pred HcCCCEEE-EE-CCCChhHHHHHHHHHHcCC-----CeEEEEccCCC
Confidence 35667666 99 9999999999998887643 24666665554
No 311
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=96.87 E-value=0.0034 Score=50.43 Aligned_cols=68 Identities=12% Similarity=0.029 Sum_probs=46.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCChHHHHHHHHHHHhcccCCeeEEEeeCCc
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCILGLLINLSVDDF 252 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~~ 252 (276)
.+|+++|+|+ ++||+.|+.--... .++.+.+ ..++.++-+.+|+++ ..++.+++.-. +++.-++.|++
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~~-~~~l~~~y~v~---~~P~~~fld~~ 111 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSEE-GQRYIQFYKLG---DFPYVSILDPR 111 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSHH-HHHHHHHHTCC---SSSEEEEECTT
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCHh-HHHHHHHcCCC---CCCEEEEEeCC
Confidence 4899999999 99999999764332 2222222 336888888887754 35677777322 56777777875
No 312
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=96.78 E-value=0.0012 Score=54.08 Aligned_cols=68 Identities=19% Similarity=0.160 Sum_probs=40.7
Q ss_pred CCCCceEEE--eCccHHHH-HhCCCCCCCCCCCCCCcccc---eEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIA--DQDRSLAV-QLGMLDPVEKDSKGMPLTCR---AVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fplls--D~~~~va~-~yG~~~~~~~~~~g~~~~~R---~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||+++ |.++..+. .|+.+.....+..|++ .++ ++||||++|+|+..+.... +.+++.+.|++|-
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~-~iP~~~~~~liD~~G~i~~~~~g~~----~~~~l~~~i~~lL 182 (187)
T 3dwv_A 109 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATK-AIKWNFTSFLIDRDGVPVERFSPGA----SVKDIEEKLIPLL 182 (187)
T ss_dssp CCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSS-SCCSTTCEEEECTTSCEEEEECTTC----CHHHHHHHHHHHC
T ss_pred cCCCCceeeccccCCcchhHHHHHHHhhcCCccCCC-ccccceeEEEECCCCCEEEEECCCC----CHHHHHHHHHHHH
Confidence 479999997 66665442 2311110000001222 345 9999999999999986332 4777888887663
No 313
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.75 E-value=0.0014 Score=50.99 Aligned_cols=56 Identities=13% Similarity=0.110 Sum_probs=43.1
Q ss_pred CC-ceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhcc
Q psy1172 19 LP-YPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQL 90 (276)
Q Consensus 19 l~-fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~ 90 (276)
++ ++++.|.+.++++.||+. ++ +++||||++|+|+..... ..+.+++.+.|+.+..
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g----~~~~~~l~~~l~~~~~ 143 (152)
T 2lja_A 87 LKGIQLHMGTDRTFMDAYLIN--------GI----PRFILLDRDGKIISANMT----RPSDPKTAEKFNELLG 143 (152)
T ss_dssp CCSEEEECSSCTHHHHHTTCC--------SS----CCEEEECTTSCEEESSCC----CTTCHHHHHHHHHHHT
T ss_pred CCCceeecCcchhHHHHcCcC--------CC----CEEEEECCCCeEEEccCC----CCCHHHHHHHHHHHhc
Confidence 44 588889999999999974 33 589999999999886432 2356888888887753
No 314
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=96.72 E-value=0.0031 Score=57.44 Aligned_cols=53 Identities=9% Similarity=-0.094 Sum_probs=40.4
Q ss_pred CCCeEEEEEEcCCCCcccHHHH------HHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTEL------ARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el------~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.+++++|.|| +.||++|...- |.++++.+.++..++.+..|..+... ..++++
T Consensus 29 ~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~---~l~~~~ 87 (367)
T 3us3_A 29 KYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDA---AVAKKL 87 (367)
T ss_dssp HCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTH---HHHHHH
T ss_pred hCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccH---HHHHHc
Confidence 3689999999 99999984332 57888888887778999999887543 345555
No 315
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.71 E-value=0.0013 Score=54.14 Aligned_cols=43 Identities=16% Similarity=0.088 Sum_probs=37.1
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
.++++|+.|| ..|||+|....+.|.++.+++.+ ++.+.-+.++
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 5788999999 99999999999999999888755 5788888775
No 316
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.71 E-value=0.00056 Score=50.69 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=40.1
Q ss_pred CCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 169 ASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 169 G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
|....|.......++|+.|+ +.|||+|..-.+.|.++ ..++.+.-|++|+++. .++.+++
T Consensus 4 ~~~~~l~~~~~~~~~v~~f~-~~~C~~C~~~~~~L~~l-----~~~i~~~~vdi~~~~~-~el~~~~ 63 (100)
T 1wjk_A 4 GSSGNLSASNRALPVLTLFT-KAPCPLCDEAKEVLQPY-----KDRFILQEVDITLPEN-STWYERY 63 (100)
T ss_dssp CCCCCCCCSCCCCCEEEEEE-CSSCHHHHHHHHHTSTT-----SSSSEEEEEETTSSTT-HHHHHHS
T ss_pred CcchhhhhccCCCCEEEEEe-CCCCcchHHHHHHHHHh-----hhCCeEEEEECCCcch-HHHHHHH
Confidence 33333443444567888888 99999999888877653 2458888899884332 4555555
No 317
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=96.69 E-value=0.0005 Score=56.49 Aligned_cols=68 Identities=19% Similarity=0.164 Sum_probs=40.1
Q ss_pred CCCCceEEE--eCccHHHH-HhCCCCCCCCCCCCCCcccc---eEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPIIA--DQDRSLAV-QLGMLDPVEKDSKGMPLTCR---AVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fplls--D~~~~va~-~yG~~~~~~~~~~g~~~~~R---~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++||++. |.++.+++ .|+.+.....+..++| .+| ++||||++|+|+..+.... +.+++.+.|++|-
T Consensus 111 ~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P-~i~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 184 (190)
T 2vup_A 111 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTK-AIKWNFTSFLIDRDGVPVERFSPGA----SVKDIEKKLIPLL 184 (190)
T ss_dssp HCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCC-SCCSTTCEEEECTTSCEEEEECTTC----CHHHHHHHHHHHH
T ss_pred cCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCc-cccccceEEEECCCCcEEEEECCCC----CHHHHHHHHHHHH
Confidence 458899997 66666543 2221110000001221 123 8999999999999876433 4678888777764
No 318
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.66 E-value=0.00082 Score=47.35 Aligned_cols=49 Identities=10% Similarity=0.037 Sum_probs=35.3
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh-HHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV-ESHHDWIKAL 235 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~-~~~~~~~~~~ 235 (276)
|+.|+ ++|||+|....+.|.++..++ .++.+.-|+++.. ...+++.+.+
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~~~~~~~~~l~~~~ 52 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIRAEGITKEDLQQKA 52 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHHHHTCCSHHHHHHT
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcC--CCceEEEEecccChHHHHHHHHHh
Confidence 56677 999999999999999988765 5788888877532 1123445544
No 319
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.58 E-value=0.00094 Score=56.66 Aligned_cols=33 Identities=9% Similarity=0.091 Sum_probs=26.8
Q ss_pred ceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 53 RAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 53 R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|++||||++|+|+..+.... +.+++.+.|++|.
T Consensus 178 pttfLID~~G~vv~~~~g~~----~~~~l~~~I~~ll 210 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHRA----TVSSVKTDILAYL 210 (215)
T ss_dssp TCEEEECTTSCEEEEECTTS----CHHHHHHHHHHHG
T ss_pred ceEEEECCCCeEEEEeCCCC----CHHHHHHHHHHHH
Confidence 79999999999999986433 3678888888765
No 320
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=96.57 E-value=0.0042 Score=47.95 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=39.8
Q ss_pred CCCCceEEEeCccH--HHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHH
Q psy1172 17 GKLPYPIIADQDRS--LAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLD 86 (276)
Q Consensus 17 ~~l~fpllsD~~~~--va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~ 86 (276)
.+++||.+.|.++. +++.||+. + .+++||||++|+|++... ..+++.+.|+
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~ 141 (142)
T 3eur_A 89 FAKEWTNGYDKELVIKNKNLYDLR--------A----IPTLYLLDKNKTVLLKDA-------TLQKVEQYLA 141 (142)
T ss_dssp SCTTSEEEECTTCHHHHTTCSCCT--------T----CSEEEEECTTCBEEEEEE-------CHHHHHHHHH
T ss_pred cccccccccCccchhhhhhhcCCC--------c----CCeEEEECCCCcEEecCC-------CHHHHHHHHh
Confidence 55899999999876 67888874 3 369999999999998775 2566666654
No 321
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.55 E-value=0.00088 Score=56.39 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=25.6
Q ss_pred ceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 53 RAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 53 R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|++||||++|+|+..+.... +.+++.+.|++|.
T Consensus 160 ~ttflID~~G~i~~~~~g~~----~~~~l~~~I~~ll 192 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWHHRT----TVSNVKMDILSYM 192 (207)
T ss_dssp TCEEEECTTSCEEEEECTTS----CHHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEECCCC----CHHHHHHHHHHHH
Confidence 79999999999999987443 3577777776654
No 322
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=96.41 E-value=0.0022 Score=52.05 Aligned_cols=68 Identities=12% Similarity=-0.066 Sum_probs=41.1
Q ss_pred CCCCceEEE--eCccHHHH-HhCCCCCCCC--CCCCC-CcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIA--DQDRSLAV-QLGMLDPVEK--DSKGM-PLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fplls--D~~~~va~-~yG~~~~~~~--~~~g~-~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.+++||++. |.++..++ .|+.+..... +..+. .-..+++||||++|+|++.+.... +.+++.+.|++|
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~l 182 (183)
T 2obi_A 109 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPME----EPLVIEKDLPHY 182 (183)
T ss_dssp TTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTS----CTHHHHTTSGGG
T ss_pred cCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCC----CHHHHHHHHHHh
Confidence 669999998 77776553 4532211100 00010 002369999999999999876432 457777777654
No 323
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=96.40 E-value=0.00085 Score=54.86 Aligned_cols=68 Identities=12% Similarity=-0.028 Sum_probs=38.6
Q ss_pred CCCCceEEE--eCccHHHH-HhCCCCCCCC--CCCCCCc-ccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIA--DQDRSLAV-QLGMLDPVEK--DSKGMPL-TCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fplls--D~~~~va~-~yG~~~~~~~--~~~g~~~-~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.+++||+++ |.+++.++ .|+.+..... +..+..+ ..+++||||++|+|++.+.... +.+++.+.|++|
T Consensus 111 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~l 184 (185)
T 2gs3_A 111 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPME----EPLVIEKDLPHY 184 (185)
T ss_dssp TTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTS----CGGGGGGGHHHH
T ss_pred cCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCC----CHHHHHHHHHHh
Confidence 568999998 66665543 4533221110 0001100 1359999999999999986432 245555555543
No 324
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.31 E-value=0.0069 Score=50.57 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=40.0
Q ss_pred CCCCeEEEEEEcCC-CCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 178 IPAFWGILFSHPSD-FTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 178 ~~gk~vvL~f~pa~-~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.++..+++.|| +. ||++|....|.|.++.+. ...+.++.|+.|.++. .+..+++
T Consensus 20 ~~~~v~lv~f~-~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-~~~~~~~ 74 (226)
T 1a8l_A 20 MVNPVKLIVFV-RKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-KELAKRY 74 (226)
T ss_dssp CCSCEEEEEEE-CSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-HHHHHHT
T ss_pred cCCCeEEEEEe-cCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-HHHHHHc
Confidence 45566678888 88 999999999999997754 3458899999886432 3445555
No 325
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.28 E-value=0.0035 Score=43.86 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=26.9
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
+..|| +.|||+|....+.|+++.++ .++.+..+.+|
T Consensus 4 ~~~f~-~~~C~~C~~~~~~l~~~~~~---~~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSAEQAVANAIDP---SKYTVEIVHLG 39 (80)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHSCT---TTEEEEEEETT
T ss_pred eEEEe-CCCCCchHHHHHHHHHHHHh---cCCeEEEEEec
Confidence 66778 99999999999998877654 45555555555
No 326
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=96.25 E-value=0.0019 Score=51.27 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=39.1
Q ss_pred CCCCceEE--EeCccHHHH-Hh--------CCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHH
Q psy1172 17 GKLPYPII--ADQDRSLAV-QL--------GMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVL 85 (276)
Q Consensus 17 ~~l~fpll--sD~~~~va~-~y--------G~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l 85 (276)
++++||++ .|.++.+++ .| |++. .+++ -.+++||||++|+|++.+.... +.+++.+.|
T Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~------~~~p-~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~i 163 (170)
T 2p5q_A 95 FKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG------DDIQ-WNFAKFLVNKDGQVVDRYYPTT----SPLSLERDI 163 (170)
T ss_dssp TCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC------SCCC-STTCEEEECTTSCEEEEECTTS----CGGGGHHHH
T ss_pred cCCCceeEeeeccCCCchHHHHHHHHhcCCCccC------Cccc-ccccEEEECCCCCEEEeeCCCC----CHHHHHHHH
Confidence 35889999 687776542 22 4421 1222 1238999999999999886433 345666666
Q ss_pred Hhh
Q psy1172 86 DSL 88 (276)
Q Consensus 86 ~~l 88 (276)
++|
T Consensus 164 ~~l 166 (170)
T 2p5q_A 164 KQL 166 (170)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 327
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=96.19 E-value=0.005 Score=48.70 Aligned_cols=68 Identities=10% Similarity=0.005 Sum_probs=39.4
Q ss_pred CCCCceEEE--eCccHHHH-HhCCCCCCCCCCCCCC-cccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 17 GKLPYPIIA--DQDRSLAV-QLGMLDPVEKDSKGMP-LTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 17 ~~l~fplls--D~~~~va~-~yG~~~~~~~~~~g~~-~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++++||+++ |.++.+++ .|+.+.....+..|.+ ...+++||||++|+|++.+....+ .+++.+.|++|
T Consensus 94 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~----~~~l~~~i~~l 165 (169)
T 2v1m_A 94 YGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTA----PYDIEGDIMEL 165 (169)
T ss_dssp HCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred cCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCC----HHHHHHHHHHH
Confidence 458999997 77776553 3421110000000110 023589999999999998864333 45666666655
No 328
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.10 E-value=0.0011 Score=50.83 Aligned_cols=47 Identities=17% Similarity=0.015 Sum_probs=30.0
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHH-HhCCcEEEEEeCCC
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEF-EQRTCKVIALSCDS 224 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~-~~~gv~Vv~VS~D~ 224 (276)
+-+.+.+||.|| +.||++|+.--+.+...++.- +.+.+.|+-|.++.
T Consensus 15 ~~~~~~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~ 62 (116)
T 3dml_A 15 DDKAELRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD 62 (116)
T ss_dssp ----CEEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS
T ss_pred cccCCCEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC
Confidence 345578999999 999999998766655443321 11236777777764
No 329
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.93 E-value=0.0064 Score=46.94 Aligned_cols=43 Identities=0% Similarity=-0.140 Sum_probs=36.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
.+.++++.|| +. |.+|+...|.|.+++++|+++ +.++-|++|.
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~ 64 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA 64 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT
T ss_pred CCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH
Confidence 3578999999 88 899999999999999998654 8899998874
No 330
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.90 E-value=0.0052 Score=46.34 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=32.6
Q ss_pred eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 182 ~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
.+|+.|| +.|||+|..-.+.|.++.+++ ++.+.-|++|.
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDG 68 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC
Confidence 5688888 999999999999999887764 58888888874
No 331
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=95.89 E-value=0.0026 Score=53.40 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=24.9
Q ss_pred cceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 52 CRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 52 ~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.++|||||++|+|+..+....+ .+++.+.|++|
T Consensus 173 ~p~tflID~~G~i~~~~~g~~~----~~~l~~~I~~l 205 (208)
T 2f8a_A 173 NFEKFLVGPDGVPLRRYSRRFQ----TIDIEPDIEAL 205 (208)
T ss_dssp TTCEEEECTTSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred CceEEEEcCCCcEEEEeCCCCC----HHHHHHHHHHH
Confidence 3789999999999999874443 45666666655
No 332
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=95.86 E-value=0.0033 Score=51.05 Aligned_cols=31 Identities=13% Similarity=0.213 Sum_probs=25.3
Q ss_pred eEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 54 AVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 54 ~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++||||++|+|++.+... .+.+++.+.|++|
T Consensus 149 ~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~l 179 (181)
T 2p31_A 149 WKYLVAPDGKVVGAWDPT----VSVEEVRPQITAL 179 (181)
T ss_dssp CEEEECTTSCEEEEECTT----SCHHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEeCCC----CCHHHHHHHHHHH
Confidence 899999999999987632 3578888888765
No 333
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=95.85 E-value=0.0076 Score=49.29 Aligned_cols=42 Identities=10% Similarity=0.101 Sum_probs=34.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
.++++|+.|| ..|||+|....+.|.++.+++.+ ++.+.-+.+
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 5788999999 99999999999999988888755 566665554
No 334
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.78 E-value=0.027 Score=45.13 Aligned_cols=49 Identities=10% Similarity=-0.000 Sum_probs=38.3
Q ss_pred EEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCC-cEEEEEeC
Q psy1172 172 VILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRT-CKVIALSC 222 (276)
Q Consensus 172 v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~g-v~Vv~VS~ 222 (276)
+.+. .-.++.+|+.|+ ..+||+|....+.+.++.++|.+.| ++++-...
T Consensus 20 ~~~G-~~~a~v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 20 LHIG-ESNAPVKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp EEES-CTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred cccC-CCCCCeEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 4555 446778888888 9999999999999999988885443 77776654
No 335
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=95.71 E-value=0.0078 Score=49.22 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=34.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
.++++|+.|| ..|||+|....+.|.++.+++.. .+.+..+.+
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 4678899999 99999999999999998888754 577776665
No 336
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.68 E-value=0.014 Score=40.52 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=25.9
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
|+.|+ +.|||+|++..+.|.+ .|+.+..+++|.
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDR 35 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCC
Confidence 56677 9999999988777664 567788888874
No 337
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.60 E-value=0.018 Score=54.94 Aligned_cols=51 Identities=10% Similarity=-0.065 Sum_probs=39.8
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.++..|..|| +.|||+|+...|.|+++..++. ++.+..|++|... +..+++
T Consensus 116 ~~~~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~---~~~~~~ 166 (521)
T 1hyu_A 116 DGDFEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQ---NEITER 166 (521)
T ss_dssp CSCEEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCH---HHHHHT
T ss_pred CCCcceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhH---HHHHHh
Confidence 4667788888 9999999999999999887763 7888888887433 344445
No 338
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=94.57 E-value=0.0021 Score=49.37 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=34.4
Q ss_pred ceEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHH
Q psy1172 21 YPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDE 80 (276)
Q Consensus 21 fpllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~e 80 (276)
+|+..|.++++++.||+. + .+++||||++|+|+.........+++.++
T Consensus 90 ~~~~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~~~~~~~~~~~~ 137 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGIT--------G----IPALVIVKKDGTLISMNGRGEVQSLGPRA 137 (143)
Confidence 456677778999999974 3 35999999999999886543333344444
No 339
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.53 E-value=0.012 Score=49.36 Aligned_cols=38 Identities=8% Similarity=-0.112 Sum_probs=30.2
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS 221 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS 221 (276)
.++++|+.|| ..|||+|++..+.|.++. +.|+.|.-+.
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~~~~l~~~~----~~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFM-DITCHYCHLLHQQLKEYN----DLGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHTTHHHHH----HTTEEEEEEE
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHH----hCCcEEEEEE
Confidence 4788999999 999999999999988743 3467776543
No 340
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=95.45 E-value=0.1 Score=41.80 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=28.0
Q ss_pred cceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 52 CRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 52 ~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+++|||||+|+|+.++.. ....+.+++++.|++|-
T Consensus 134 ~~~~~liD~~G~i~~~~~g--~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 134 GTSFYLIDQNGKVMKKYSG--ISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CCEEEEECTTSCEEEEEES--SSSCCHHHHHHHHHHHH
T ss_pred eeEEEEEcCCCeEEEEECC--CCCCCHHHHHHHHHHHh
Confidence 3689999999999988762 22446899999998763
No 341
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.34 E-value=0.012 Score=48.59 Aligned_cols=43 Identities=14% Similarity=0.085 Sum_probs=35.3
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
.++++|+.|| ..|||+|....+.|.++.+++.+ .+.+.-+.++
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 4688999999 99999999999999988887755 5666666664
No 342
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=95.31 E-value=0.017 Score=45.60 Aligned_cols=49 Identities=14% Similarity=0.104 Sum_probs=37.7
Q ss_pred eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 26 DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 26 D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|.+.++++.||+. |+ ++++|||++|+|+... ... .++.+++++.|+++.
T Consensus 103 ~~~~~l~~~~~v~--------~~----Pt~~~~d~~G~~~~~~-G~~--~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 103 QKNQELKAQYKVT--------GF----PELVFIDAEGKQLARM-GFE--PGGGAAYVSKVKSAL 151 (154)
T ss_dssp HHHHHHHHHTTCC--------SS----SEEEEECTTCCEEEEE-CCC--TTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCC--------CC----CEEEEEcCCCCEEEEe-cCC--CCCHHHHHHHHHHHH
Confidence 4456899999985 44 5999999999998876 333 346889999888764
No 343
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.15 E-value=0.09 Score=39.32 Aligned_cols=57 Identities=16% Similarity=0.104 Sum_probs=42.9
Q ss_pred CCCCceEE---EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPII---ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpll---sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.++.|-.+ .|.+.++++.||+. ++ ++++++|++|+++..+... .+.+++.+.|+.+.
T Consensus 57 ~~v~~~~v~~~~d~~~~~~~~~~v~--------~~----Pt~~~~~~~G~~~~~~~G~----~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 57 GKFNIYYARLEEEKNIDLAYKYDAN--------IV----PTTVFLDKEGNKFYVHQGL----MRKNNIETILNSLG 116 (126)
T ss_dssp SSCEEEEEETTSSHHHHHHHHTTCC--------SS----SEEEEECTTCCEEEEEESC----CCHHHHHHHHHHHC
T ss_pred CCeEEEEEeCCCCchHHHHHHcCCc--------ce----eEEEEECCCCCEEEEecCC----CCHHHHHHHHHHHh
Confidence 34666555 36678999999974 34 5999999999998876532 45788988888765
No 344
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.08 E-value=0.026 Score=38.23 Aligned_cols=44 Identities=14% Similarity=0.123 Sum_probs=29.0
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++.|+ +.|||+|++..+.|.+ .|+.+..+.++......++.+.+
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~-------~~i~~~~~di~~~~~~~~~~~~~ 46 (75)
T 1r7h_A 3 ITLYT-KPACVQCTATKKALDR-------AGLAYNTVDISLDDEARDYVMAL 46 (75)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHT
T ss_pred EEEEe-CCCChHHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHc
Confidence 45677 9999999988877764 46777777777433333333333
No 345
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=95.05 E-value=0.0043 Score=48.11 Aligned_cols=55 Identities=9% Similarity=0.139 Sum_probs=38.4
Q ss_pred CceEEE-eCccHHHHHhCCCCCCCCCCCCCCcccceEEEEC-CCCcEEEEEecCCCCCCCHHHHHHHHHhhcccccCCCC
Q psy1172 20 PYPIIA-DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIID-PAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVA 97 (276)
Q Consensus 20 ~fplls-D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiId-p~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~~~~~ 97 (276)
.||++. |.+.++++.||+. ++ +++|||| ++|+|+..... +...+.+.+
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~--------~~----Pt~~lid~~~G~i~~~~~~------------------~~~~~~~~~ 137 (146)
T 1o8x_A 88 AVPFAQSEAVQKLSKHFNVE--------SI----PTLIGVDADSGDVVTTRAR------------------ATLVKDPEG 137 (146)
T ss_dssp ECCGGGHHHHHHHHHHTTCC--------SS----SEEEEEETTTCCEEESCHH------------------HHHTTCTTC
T ss_pred eeccchhhHHHHHHHHhCCC--------CC----CEEEEEECCCCeEEEecch------------------hHHhhCCcc
Confidence 455554 6678999999974 33 5999999 99999876431 112334567
Q ss_pred cCCCCCC
Q psy1172 98 TPVDWKV 104 (276)
Q Consensus 98 ~p~~w~~ 104 (276)
+..+|++
T Consensus 138 ~~~~w~~ 144 (146)
T 1o8x_A 138 EQFPWKD 144 (146)
T ss_dssp TTTTCCC
T ss_pred ccCCCCC
Confidence 8888885
No 346
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=94.88 E-value=0.0055 Score=51.11 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=34.4
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCC
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D 223 (276)
++++|+-|| +.|||+|..-.|.| .++.+++. .++.+.-+.++
T Consensus 113 ~~~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 113 GAPQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CCCEEEEEE-CCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 578999999 99999999999988 87777774 35777777765
No 347
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=94.78 E-value=0.028 Score=48.35 Aligned_cols=52 Identities=4% Similarity=0.006 Sum_probs=38.5
Q ss_pred CCCeEEEEEEcC--CCCcccHHHHHHHHHHHHHHHh-CCcEEEEEeCCC--hHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPS--DFTPVCTTELARVLQLIKEFEQ-RTCKVIALSCDS--VESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa--~~cp~C~~el~~l~~~~~~~~~-~gv~Vv~VS~D~--~~~~~~~~~~~ 235 (276)
.+++++|.|| + .||+ -.|.+.++.++++. .++.|..|++|+ .......++++
T Consensus 21 ~~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~ 77 (240)
T 2qc7_A 21 KSKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKY 77 (240)
T ss_dssp GCSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHT
T ss_pred CCCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHc
Confidence 3578999999 8 8887 78899999999864 458888888765 22234455666
No 348
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.78 E-value=0.013 Score=42.33 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=28.2
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
|+.|| +.||++|..-.+.|.++..++ +.-|++|... ++.+++
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~---~l~~~~ 44 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQARAGA------FFSVFIDDDA---ALESAY 44 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTTCCC------EEEEECTTCH---HHHHHH
T ss_pred EEEEE-CCCCchHHHHHHHHHHHHHhh------eEEEECCCCH---HHHHHh
Confidence 67788 999999998888877543221 4567776422 244555
No 349
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=94.52 E-value=0.022 Score=45.89 Aligned_cols=36 Identities=6% Similarity=0.066 Sum_probs=28.0
Q ss_pred eEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 54 AVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 54 ~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++||||++|+|+..+....+...-..+|.+.|+++.
T Consensus 138 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~ 173 (180)
T 3kij_A 138 WKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVI 173 (180)
T ss_dssp CEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 499999999999998866666655666777776665
No 350
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=94.51 E-value=0.05 Score=45.37 Aligned_cols=52 Identities=10% Similarity=-0.103 Sum_probs=36.5
Q ss_pred CeEEEEEEc----CCCCcccHHHHHHHHHHHHHHHh-CCcEEEEEeCCChHHHHHHHHHH
Q psy1172 181 FWGILFSHP----SDFTPVCTTELARVLQLIKEFEQ-RTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 181 k~vvL~f~p----a~~cp~C~~el~~l~~~~~~~~~-~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++++|.||. +.||++|...+|.+.++++++.+ ..+.+..|..+.. .+..+++
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~---~~l~~~~ 77 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH---KEETEKY 77 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC---HHHHHHT
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc---HHHHHHc
Confidence 466666661 66788888999999999888853 3478888877643 3445555
No 351
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=94.45 E-value=0.036 Score=44.96 Aligned_cols=42 Identities=5% Similarity=-0.001 Sum_probs=33.5
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
.++.+|+.|| ..+||+|....+.|.++.+++.. .+.+..+.+
T Consensus 24 ~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 4667888888 99999999999999988887743 467665654
No 352
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=94.14 E-value=0.089 Score=44.87 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=31.2
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
-.++.+|+.|+ ..|||+|++..+.+.++.++ .++.|+-+.+
T Consensus 95 ~~ak~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~ 135 (241)
T 1v58_A 95 KDAPVIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLV 135 (241)
T ss_dssp TTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEEC
T ss_pred CCCCeEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEEC
Confidence 35778899999 99999999999998876553 3476665543
No 353
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=93.77 E-value=0.11 Score=44.96 Aligned_cols=53 Identities=4% Similarity=-0.019 Sum_probs=38.6
Q ss_pred CCCeEEEEEEc-CCCCcccHHHHHHHHHHHHHHHh--CCcEEEEEeCCC--hHHHHHHHHHH
Q psy1172 179 PAFWGILFSHP-SDFTPVCTTELARVLQLIKEFEQ--RTCKVIALSCDS--VESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~p-a~~cp~C~~el~~l~~~~~~~~~--~gv~Vv~VS~D~--~~~~~~~~~~~ 235 (276)
.++++||.||- +.||+ -.|.+.++.++|.. ..+.|.-|++|. .......++++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 45789999995 78887 78899999999975 468888888775 11123455555
No 354
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.63 E-value=0.026 Score=46.26 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=34.6
Q ss_pred ecccCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCC
Q psy1172 174 LECSIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 174 l~~~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D 223 (276)
|.....++++|+.|| ..|||+|..-.+.+ .++.+++.+ ++.++-+.+.
T Consensus 8 l~~p~~~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 8 ITPPVVDAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp CSSCCTTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred eCCCCCCCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 333455689999999 99999999998886 355454533 5777776654
No 355
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=93.62 E-value=0.013 Score=45.00 Aligned_cols=37 Identities=11% Similarity=0.155 Sum_probs=27.7
Q ss_pred CceEEE-eCccHHHHHhCCCCCCCCCCCCCCcccceEEEEC-CCCcEEEEE
Q psy1172 20 PYPIIA-DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIID-PAKKLRLSF 68 (276)
Q Consensus 20 ~fplls-D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiId-p~g~I~~~~ 68 (276)
.||+.. |.+.++++.||+. ++ +++|||| ++|+|+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~--------~~----Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 88 ALPFDQRSTVSELGKTFGVE--------SI----PTLITINADTGAIIGTQ 126 (144)
T ss_dssp ECCTTCHHHHHHHHHHHTCC--------SS----SEEEEEETTTCCEEESC
T ss_pred EeeccchhHHHHHHHHcCCC--------CC----CEEEEEECCCCeEEecc
Confidence 344444 5577899999974 33 5999999 899998754
No 356
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=93.59 E-value=0.16 Score=38.04 Aligned_cols=47 Identities=11% Similarity=0.194 Sum_probs=36.8
Q ss_pred CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 27 QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 27 ~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+.++++.||+. ++ ++++++|++|++...+... ++.+++.+.|+.+.
T Consensus 74 ~~~~~~~~~~v~--------~~----Pt~~~~d~~G~~~~~~~G~----~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 74 EGVELRKKYGVH--------AY----PTLLFINSSGEVVYRLVGA----EDAPELLKKVKLGV 120 (130)
T ss_dssp THHHHHHHTTCC--------SS----CEEEEECTTSCEEEEEESC----CCHHHHHHHHHHHH
T ss_pred chHHHHHHcCCC--------CC----CEEEEECCCCcEEEEecCC----CCHHHHHHHHHHHH
Confidence 467899999974 44 5999999999998876533 35788888888765
No 357
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=93.53 E-value=0.076 Score=47.56 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=39.8
Q ss_pred CeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 181 FWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 181 k~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++++|.|| +.||+.|...++.|.+++++|+++ +.++.|..|..+ ....++.+
T Consensus 136 ~~~~v~F~-~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~-~~~~~~~f 187 (361)
T 3uem_A 136 KTHILLFL-PKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTD-NQRILEFF 187 (361)
T ss_dssp CEEEEEEC-CSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGG-GHHHHHHT
T ss_pred CcEEEEEE-eCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHH-HHHHHHHc
Confidence 46678888 999999999999999999999765 777777776322 33445555
No 358
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=93.29 E-value=0.058 Score=44.09 Aligned_cols=39 Identities=5% Similarity=-0.101 Sum_probs=32.0
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
++++|+.|| ..|||+|.+-.|.+.++.+++ ++.+.-+.+
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEEC
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEec
Confidence 688999999 999999999999999988888 455544444
No 359
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=93.26 E-value=0.18 Score=35.50 Aligned_cols=43 Identities=9% Similarity=0.204 Sum_probs=28.2
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
++.|+ +.|||+|++..+.|.+ .++.+.-+.++ ++..+++.+..
T Consensus 8 v~~y~-~~~C~~C~~~~~~L~~-------~~i~~~~vdv~-~~~~~~l~~~~ 50 (89)
T 2klx_A 8 IILYT-RPNCPYCKRARDLLDK-------KGVKYTDIDAS-TSLRQEMVQRA 50 (89)
T ss_dssp EEEES-CSCCTTTHHHHHHHHH-------HTCCEEEECSC-HHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECC-HHHHHHHHHHh
Confidence 45566 8999999987776664 35667777777 44344444433
No 360
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=92.95 E-value=0.038 Score=40.31 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=17.8
Q ss_pred EEEEEcCCCCcccHHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQL 206 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~ 206 (276)
|+.|+ +.|||+|++-.+.|.++
T Consensus 14 v~~f~-~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 14 VVVFI-KPTCPFCRKTQELLSQL 35 (105)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHS
T ss_pred EEEEE-cCCCHhHHHHHHHHHHc
Confidence 56677 99999999888877653
No 361
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=92.64 E-value=0.16 Score=37.16 Aligned_cols=47 Identities=4% Similarity=0.028 Sum_probs=28.9
Q ss_pred EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 183 GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 183 vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.|+.|+ +.|||+|++-.+.|.++ ...++.+-|..++.+...++.+..
T Consensus 23 ~v~ly~-~~~Cp~C~~ak~~L~~~-----~i~y~~vdI~~~~~~~~~~~~~~l 69 (103)
T 3nzn_A 23 KVIMYG-LSTCVWCKKTKKLLTDL-----GVDFDYVYVDRLEGKEEEEAVEEV 69 (103)
T ss_dssp CEEEEE-CSSCHHHHHHHHHHHHH-----TBCEEEEEGGGCCHHHHHHHHHHH
T ss_pred eEEEEc-CCCCchHHHHHHHHHHc-----CCCcEEEEeeccCcccHHHHHHHH
Confidence 466677 99999999988777653 223445444443454444555443
No 362
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=92.51 E-value=0.13 Score=43.80 Aligned_cols=52 Identities=12% Similarity=-0.034 Sum_probs=37.2
Q ss_pred CCeEEEEEEcCCC--CcccHHHHHHHHHHHHHHHh-CC---cEEEEEeCCChHHHHHHHHHH
Q psy1172 180 AFWGILFSHPSDF--TPVCTTELARVLQLIKEFEQ-RT---CKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 180 gk~vvL~f~pa~~--cp~C~~el~~l~~~~~~~~~-~g---v~Vv~VS~D~~~~~~~~~~~~ 235 (276)
+++++|.|| +.| |++|..-.+.+.++.+.+.. +| +.++-++.|... ...+++
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~---~~~~~~ 82 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS---DKFSEF 82 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH---HHHHHT
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH---HHHHhc
Confidence 478999999 888 99999998888888877421 22 677777766432 334555
No 363
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=92.07 E-value=0.035 Score=42.63 Aligned_cols=38 Identities=5% Similarity=0.072 Sum_probs=28.9
Q ss_pred CceEEE-eCccHHHHHhCCCCCCCCCCCCCCcccceEEEEC-CCCcEEEEEe
Q psy1172 20 PYPIIA-DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIID-PAKKLRLSFL 69 (276)
Q Consensus 20 ~fplls-D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiId-p~g~I~~~~~ 69 (276)
.||++. |.+.++++.||+. ++ +++|||| ++|+|+....
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 88 ALPFEDRKGMEFLTTGFDVK--------SI----PTLVGVEADSGNIITTQA 127 (144)
T ss_dssp ECCTTCHHHHHHHHHHTTCC--------SS----SEEEEEETTTCCEEESCH
T ss_pred ccccCchHHHHHHHHHcCCC--------CC----CEEEEEECCCCcEEeccc
Confidence 455555 6678999999974 33 5999999 9999987653
No 364
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=92.02 E-value=0.07 Score=40.71 Aligned_cols=48 Identities=19% Similarity=0.201 Sum_probs=35.3
Q ss_pred eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEE--EEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 26 DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLR--LSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 26 D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~--~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|.+.++++.||+. |+ ++++++|++|+++ ..+. -..+.+++++.|+.++
T Consensus 78 ~~~~~l~~~~~v~--------~~----Pt~~~~d~~G~~v~~~~~~----G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 78 AQDVALLKHLNVL--------GL----PTILFFDGQGQEHPQARVT----GFMDAETFSAHLRDRQ 127 (134)
T ss_dssp HHHHHHHHHTTCC--------SS----SEEEEECTTSCBCGGGCBC----SCCCHHHHHHHHHHC-
T ss_pred chHHHHHHHcCCC--------CC----CEEEEECCCCCEeeeeeee----eccCHHHHHHHHHhcC
Confidence 4567899999984 44 5999999999986 3332 2246889999998876
No 365
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=91.85 E-value=0.22 Score=37.49 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=41.9
Q ss_pred CCceEEE----eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEec-CCCC--CCCHHHHHHHHHhhc
Q psy1172 19 LPYPIIA----DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLY-PATT--GRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fplls----D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~-~~~~--~r~~~eilr~l~~lq 89 (276)
+.|--+. |.+.++++.||+.... |+ ++++++|++|+++..... .... ..+.+++.+.|+.|.
T Consensus 64 ~~~~~vd~~~~~~~~~l~~~~~v~~~~-----~~----Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 64 FEVVKIDVGNFDRNLELSQAYGDPIQD-----GI----PAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp CEEEEEECTTTTSSHHHHHHTTCGGGG-----CS----SEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEEEEeCCcccchHHHHHHhCCccCC-----cc----ceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 4544443 6788999999983210 44 599999999999887664 1111 236788888887663
No 366
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=91.50 E-value=0.03 Score=49.60 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=24.2
Q ss_pred CeEEEEEEcCCCCcccHHHHHHHHHHHHHH
Q psy1172 181 FWGILFSHPSDFTPVCTTELARVLQLIKEF 210 (276)
Q Consensus 181 k~vvL~f~pa~~cp~C~~el~~l~~~~~~~ 210 (276)
+..++.|| +.|||+|++..|.++++.+++
T Consensus 198 ~~~vV~F~-A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 198 QIGGTMYG-AYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HTTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred CCCEEEEE-CCCCHHHHHHHHHHHHHHHHc
Confidence 34578899 999999999999999876554
No 367
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.42 E-value=0.24 Score=37.88 Aligned_cols=35 Identities=9% Similarity=0.036 Sum_probs=23.4
Q ss_pred CeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 181 FWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 181 k~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
+.++| |+ +.|||+|++-.+.|.++ ++.+..|.+|.
T Consensus 27 ~~vvv-f~-~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~ 61 (130)
T 2cq9_A 27 NCVVI-FS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDL 61 (130)
T ss_dssp SSEEE-EE-CSSCSHHHHHHHHHHHH-------TCCCEEEETTT
T ss_pred CcEEE-EE-cCCChHHHHHHHHHHHc-------CCCcEEEECcC
Confidence 34444 77 99999999888777653 34445555553
No 368
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=91.01 E-value=0.34 Score=35.28 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=24.5
Q ss_pred EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 183 GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 183 vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
-|+.|+ ..|||+|.+-...|.+ .|+.+.-+.+|..
T Consensus 17 ~v~vy~-~~~Cp~C~~ak~~L~~-------~~i~y~~idI~~~ 51 (99)
T 3qmx_A 17 KIEIYT-WSTCPFCMRALALLKR-------KGVEFQEYCIDGD 51 (99)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHH-------HTCCCEEEECTTC
T ss_pred CEEEEE-cCCChhHHHHHHHHHH-------CCCCCEEEEcCCC
Confidence 455677 8999999988777765 3555556666543
No 369
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=90.86 E-value=0.39 Score=32.75 Aligned_cols=44 Identities=16% Similarity=0.232 Sum_probs=27.5
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHDWIKAL 235 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~~~~~ 235 (276)
++.|+ ..|||+|++-.+.|.+ .|+.+.-+.++. +....++.+..
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~ 47 (82)
T 1fov_A 3 VEIYT-KETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRS 47 (82)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHh
Confidence 45566 8999999987777664 355555566653 33334455444
No 370
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=90.63 E-value=1.1 Score=33.90 Aligned_cols=55 Identities=11% Similarity=0.177 Sum_probs=39.5
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++|++|++. .+. .+++.+++.+.|+.+.
T Consensus 70 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~~~G~~~-~~~----G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 70 QIVIYKVDTEKEQELAGAFGIR--------SI----PSILFIPMEGKPE-MAQ----GAMPKASFKKAIDEFL 125 (136)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----CEEEEECSSSCCE-EEE----SCCCHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCHHHHHHcCCC--------CC----CEEEEECCCCcEE-EEe----CCCCHHHHHHHHHHHh
Confidence 4555333 45677899999984 34 5999999999986 332 2456889998888764
No 371
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=90.17 E-value=0.26 Score=36.61 Aligned_cols=34 Identities=12% Similarity=0.069 Sum_probs=24.1
Q ss_pred eEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcE---EEEEeCC
Q psy1172 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCK---VIALSCD 223 (276)
Q Consensus 182 ~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~---Vv~VS~D 223 (276)
..|+.|+ ++|||+|.+-.+.|. +.++. +..|.+|
T Consensus 19 ~~vv~f~-~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 19 NKVTIFV-KYTCPFCRNALDILN-------KFSFKRGAYEIVDIK 55 (114)
T ss_dssp TCEEEEE-CTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGG
T ss_pred CCEEEEE-eCCChhHHHHHHHHH-------HcCCCcCceEEEEcc
Confidence 3466678 999999998777665 35555 6666665
No 372
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=89.65 E-value=1.1 Score=33.83 Aligned_cols=54 Identities=11% Similarity=0.231 Sum_probs=39.1
Q ss_pred CCCc-eEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPY-PIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~f-pllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.| .+-.|.+.++++.||+. ++ ++++++|++|++. .+.. .++.+++.+.|+.+
T Consensus 83 ~~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~~~~g~~~-~~~G----~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 83 KIYIYKVNVDKEPELARDFGIQ--------SI----PTIWFVPMKGEPQ-VNMG----ALSKEQLKGYIDKV 137 (141)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEECSSSCCE-EEES----CCCHHHHHHHHHHT
T ss_pred ceEEEEEECCCCHHHHHHcCCC--------Cc----CEEEEEeCCCCEE-EEeC----CCCHHHHHHHHHHH
Confidence 4555 34456788999999985 44 5899999999986 3332 34688888888765
No 373
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=89.60 E-value=0.078 Score=42.10 Aligned_cols=28 Identities=4% Similarity=0.009 Sum_probs=23.0
Q ss_pred cHHHHHhCCCCCCCCCCCCCCcccceEEEECCC-CcEEEEE
Q psy1172 29 RSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPA-KKLRLSF 68 (276)
Q Consensus 29 ~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~-g~I~~~~ 68 (276)
.++++.||+. + .+++||||++ |+|+...
T Consensus 118 ~~l~~~~~v~--------~----~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 118 EALTKKYSVE--------S----IPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp HHHHHHTTCC--------S----SSEEEEEETTTCCEEESC
T ss_pred HHHHHHcCCC--------C----CCEEEEEeCCCCEEEecc
Confidence 7899999974 3 3699999998 9997754
No 374
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=89.24 E-value=0.35 Score=35.66 Aligned_cols=21 Identities=10% Similarity=0.226 Sum_probs=16.3
Q ss_pred EEEEEcCCCCcccHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQ 205 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~ 205 (276)
|+.|+ ..|||+|.+-.+.|.+
T Consensus 21 v~vy~-~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEVKTLFKR 41 (113)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH
Confidence 55577 8999999987777664
No 375
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=89.23 E-value=0.49 Score=33.26 Aligned_cols=44 Identities=9% Similarity=0.157 Sum_probs=28.7
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHDWIKAL 235 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~~~~~ 235 (276)
++.|+ ..|||+|++-.+.|.+ .|+.+.-+.++. +...+++.+..
T Consensus 8 v~ly~-~~~C~~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~l~~~~ 52 (92)
T 2khp_A 8 VIIYT-RPGCPYCARAKALLAR-------KGAEFNEIDASATPELRAEMQERS 52 (92)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEESTTSHHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHh
Confidence 55667 8999999987666653 467666777764 33334444444
No 376
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=89.13 E-value=0.4 Score=34.97 Aligned_cols=48 Identities=6% Similarity=-0.182 Sum_probs=28.5
Q ss_pred CCCeEEEEEEcC-----CCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPS-----DFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa-----~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~~~~~ 235 (276)
+.++++| |+ . .|||+|.+-.+.|.++ ++.+.-+.++ +++..+.+.+..
T Consensus 15 ~~~~vvv-f~-~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~~~~~~~l~~~~ 68 (105)
T 2yan_A 15 NKASVML-FM-KGNKQEAKCGFSKQILEILNST-------GVEYETFDILEDEEVRQGLKAYS 68 (105)
T ss_dssp TSSSEEE-EE-SBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGCHHHHHHHHHHH
T ss_pred ccCCEEE-EE-ecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCCHHHHHHHHHHH
Confidence 3345554 66 5 8999999877776543 5666666665 333333344444
No 377
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=88.97 E-value=1.6 Score=30.72 Aligned_cols=54 Identities=7% Similarity=0.058 Sum_probs=38.0
Q ss_pred CCCceEEE-eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPIIA-DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fplls-D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+. |.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 52 KVTVAKVNIDDNPETPNAYQVR--------SI----PTLMLV-RDGKVIDKKVGA----LPKSQLKAWVESA 106 (107)
T ss_dssp SEEEEEEETTTCCHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHT
T ss_pred cEEEEEEECCCCHHHHHhcCCC--------cc----CEEEEE-eCCEEEEEecCC----CCHHHHHHHHHhc
Confidence 45553333 6678999999974 34 478888 899988766532 3578888888765
No 378
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=88.82 E-value=0.32 Score=38.22 Aligned_cols=24 Identities=8% Similarity=0.033 Sum_probs=18.1
Q ss_pred CeEEEEEEcCCCCcccHHHHHHHHHH
Q psy1172 181 FWGILFSHPSDFTPVCTTELARVLQL 206 (276)
Q Consensus 181 k~vvL~f~pa~~cp~C~~el~~l~~~ 206 (276)
+.++| |+ +.|||+|.+-.+.|.++
T Consensus 49 ~~Vvv-f~-~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 49 NCVVI-FS-KTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp CSEEE-EE-CTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EE-CCCChhHHHHHHHHHHc
Confidence 34444 77 99999999888877653
No 379
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=88.79 E-value=0.28 Score=40.19 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=37.0
Q ss_pred CCCe-EEecccCCCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeC
Q psy1172 168 QASL-VILECSIPAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 168 ~G~~-v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~ 222 (276)
.|+. ..|.....++++|+.|| ..+||+|.+-.+.| .++.+++.+ ++.++-+..
T Consensus 8 eG~~Y~~l~~p~~~~~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 8 DGKQYITLDKPVAGEPQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp BTTTEEECSSCCCSSSCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCCceEcCCCCCCCCeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 4543 33444556789999999 99999999998876 466666643 466665554
No 380
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=88.42 E-value=1.8 Score=30.44 Aligned_cols=54 Identities=9% Similarity=0.222 Sum_probs=37.2
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 49 ~v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 49 KVTVAKLNVDENPETTSQFGIM--------SI----PTLILF-KGGRPVKQLIGY----QPKEQLEAQLADV 103 (105)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHTTTT
T ss_pred CcEEEEEECcCCHHHHHHcCCc--------cc----cEEEEE-eCCeEEEEEecC----CCHHHHHHHHHHH
Confidence 4555444 36678999999984 44 488888 899987766532 3467787777654
No 381
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=88.32 E-value=0.54 Score=33.02 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=22.5
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCCh
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSV 225 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~ 225 (276)
|..|+ ..|||+|++-...|.++ ...++.+-|...+.
T Consensus 14 v~ly~-~~~Cp~C~~~~~~L~~~-----gi~~~~~~v~~~~~ 49 (92)
T 3ic4_A 14 VLMYG-LSTCPHCKRTLEFLKRE-----GVDFEVIWIDKLEG 49 (92)
T ss_dssp SEEEE-CTTCHHHHHHHHHHHHH-----TCCCEEEEGGGCCH
T ss_pred EEEEE-CCCChHHHHHHHHHHHc-----CCCcEEEEeeeCCc
Confidence 55566 89999999877766653 23345555543333
No 382
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=88.14 E-value=0.83 Score=33.55 Aligned_cols=49 Identities=6% Similarity=-0.172 Sum_probs=30.0
Q ss_pred CCCeEEEEEEcC----CCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC-hHHHHHHHHHH
Q psy1172 179 PAFWGILFSHPS----DFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS-VESHHDWIKAL 235 (276)
Q Consensus 179 ~gk~vvL~f~pa----~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~-~~~~~~~~~~~ 235 (276)
+...|+| |..+ .|||+|.+-...|.+ .|+.+.-|.++. ++..+.+.+..
T Consensus 13 ~~~~vvv-y~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~ 66 (109)
T 1wik_A 13 NKASVML-FMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKTFS 66 (109)
T ss_dssp TTSSEEE-EESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEESSSCHHHHHHHHHHH
T ss_pred ccCCEEE-EEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEECCCCHHHHHHHHHHh
Confidence 3445554 5524 899999987766653 577777777764 33333344443
No 383
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=88.03 E-value=1.9 Score=31.09 Aligned_cols=55 Identities=11% Similarity=0.202 Sum_probs=39.5
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+.
T Consensus 49 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 49 KLKIVKIDVDENQETAGKYGVM--------SI----PTLLVL-KDGEVVETSVGF----KPKEALQELVNKHL 104 (112)
T ss_dssp TCEEEEEETTTCCSHHHHTTCC--------SB----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTTS
T ss_pred CcEEEEEECCCCHHHHHHcCCC--------cc----cEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHHH
Confidence 4665444 36778999999984 33 588888 899998776643 35788888887654
No 384
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=88.00 E-value=0.42 Score=35.87 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=22.1
Q ss_pred EEEEEcCCCCcccHHH-HHHHHHHHHHHHhCC---cEEEEEeCC
Q psy1172 184 ILFSHPSDFTPVCTTE-LARVLQLIKEFEQRT---CKVIALSCD 223 (276)
Q Consensus 184 vL~f~pa~~cp~C~~e-l~~l~~~~~~~~~~g---v~Vv~VS~D 223 (276)
|+.|+ ++|||+|.+- .+.|. +.+ +.+..|.+|
T Consensus 27 Vvvf~-~~~Cp~C~~alk~~L~-------~~~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHAALNTLFE-------KLKVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHT-------TSCCCGGGEEEEEGG
T ss_pred EEEEE-cCCCcCHHHHHHHHHH-------HcCCCCCCeEEEECc
Confidence 55577 8999999987 44433 455 667777765
No 385
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=87.81 E-value=2 Score=30.43 Aligned_cols=54 Identities=17% Similarity=0.250 Sum_probs=37.4
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (108)
T 2trx_A 52 KLTVAKLNIDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 106 (108)
T ss_dssp TEEEEEEETTTCTTHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHHHcCCc--------cc----CEEEEE-eCCEEEEEEecC----CCHHHHHHHHHHh
Confidence 3555433 35678899999975 44 478888 899988766533 3578888887764
No 386
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=87.44 E-value=1.1 Score=32.31 Aligned_cols=33 Identities=3% Similarity=0.058 Sum_probs=22.9
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
|..|. .+|||+|.+--..|. ++|+..--+.++.
T Consensus 6 I~vYs-~~~Cp~C~~aK~~L~-------~~gi~y~~idi~~ 38 (92)
T 2lqo_A 6 LTIYT-TSWCGYCLRLKTALT-------ANRIAYDEVDIEH 38 (92)
T ss_dssp EEEEE-CTTCSSHHHHHHHHH-------HTTCCCEEEETTT
T ss_pred EEEEc-CCCCHhHHHHHHHHH-------hcCCceEEEEcCC
Confidence 44444 899999997655443 4777777777764
No 387
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=87.16 E-value=2.8 Score=29.81 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=39.0
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+++-
T Consensus 57 ~v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~l 112 (115)
T 1thx_A 57 RLKVVKLEIDPNPTTVKKYKVE--------GV----PALRLV-KGEQILDSTEGV----ISKDKLLSFLDTHL 112 (115)
T ss_dssp TCEEEEEESTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred cEEEEEEEcCCCHHHHHHcCCC--------ce----eEEEEE-cCCEEEEEecCC----CCHHHHHHHHHHHh
Confidence 4666444 35677899999984 33 488888 899988766532 35788888887653
No 388
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=87.12 E-value=2.5 Score=29.70 Aligned_cols=55 Identities=9% Similarity=0.111 Sum_probs=38.9
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+... .+.+++.+.|+.+.
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 50 KLLVAKLDVDENPKTAMRYRVM--------SI----PTVILF-KDGQPVEVLVGA----QPKRNYQAKIEKHL 105 (109)
T ss_dssp TBEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTTC
T ss_pred ceEEEEEECCCCHhHHHhCCCC--------cC----CEEEEE-eCCcEeeeEeCC----CCHHHHHHHHHHHh
Confidence 4555444 36778999999985 34 478888 899988766532 35788888887654
No 389
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=86.46 E-value=0.88 Score=39.73 Aligned_cols=40 Identities=18% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC 222 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~ 222 (276)
.|+.+|+.|+ -..||+|++..+.+.+..++ -.+.++.+-.
T Consensus 146 ~gk~~I~vFt-Dp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVS-DPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEE-CTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEE-CcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 3678899999 99999999999999976653 4466666554
No 390
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=86.36 E-value=4.3 Score=28.47 Aligned_cols=54 Identities=15% Similarity=0.298 Sum_probs=35.8
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|--+ .|.+.++++.||+. ++| +++++ ++|++...+.... +.+++.+.|+++
T Consensus 51 ~~~~~~v~~~~~~~~~~~~~v~--------~~P----t~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 105 (107)
T 1dby_A 51 KLKCVKLNTDESPNVASEYGIR--------SIP----TIMVF-KGGKKCETIIGAV----PKATIVQTVEKY 105 (107)
T ss_dssp TCEEEEEETTTCHHHHHHHTCC--------SSC----EEEEE-SSSSEEEEEESCC----CHHHHHHHHHHH
T ss_pred ceEEEEEECCCCHHHHHHCCCC--------cCC----EEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 3555333 35677999999984 443 55554 7999987766332 467787777765
No 391
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=86.20 E-value=1.5 Score=31.42 Aligned_cols=44 Identities=23% Similarity=0.457 Sum_probs=32.9
Q ss_pred CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 27 QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 27 ~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.+.++++.||+. ++| + |+++++|++...+. |.+.+++.+.|+++
T Consensus 66 ~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----G~~~~~l~~~l~~~ 109 (111)
T 2pu9_C 66 ENKTLAKELGIR--------VVP----T-FKILKENSVVGEVT-----GAKYDKLLEAIQAA 109 (111)
T ss_dssp TTHHHHHHHCCS--------BSS----E-EEEESSSSEEEEEE-----SSCHHHHHHHHHHH
T ss_pred chHHHHHHcCCC--------eee----E-EEEEeCCcEEEEEc-----CCCHHHHHHHHHHh
Confidence 567999999974 443 4 88889999987665 33478888888765
No 392
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=85.67 E-value=1.8 Score=32.82 Aligned_cols=74 Identities=9% Similarity=0.010 Sum_probs=42.0
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhccccc--C
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQLTDT--K 94 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~~~--~ 94 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ .+|++...+... ++.+++.+.|+.+-.... .
T Consensus 56 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l~~~~~~~ 118 (140)
T 3hz4_A 56 SAVFGRINIATNPWTAEKYGVQ--------GT----PTFKFF-CHGRPVWEQVGQ----IYPSILKNAVRDMLQHGEECI 118 (140)
T ss_dssp TSEEEEEETTTCHHHHHHHTCC--------EE----SEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCcCHhHHHHCCCC--------cC----CEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHHhcccccCc
Confidence 4665444 36778999999974 33 355555 799987766543 357888888876542222 2
Q ss_pred CCCcCCCCCCCCce
Q psy1172 95 KVATPVDWKVGMEI 108 (276)
Q Consensus 95 ~~~~p~~w~~g~~~ 108 (276)
...+|.+|.-+..|
T Consensus 119 ~~~~~~~~~~~~~~ 132 (140)
T 3hz4_A 119 RKSTPVGQDITGYV 132 (140)
T ss_dssp HTSBC---------
T ss_pred ccccccCccceeee
Confidence 36788888765544
No 393
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=85.57 E-value=1.2 Score=35.50 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=32.7
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHH-HHHHHHHHhCCcEEEEEeCC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARV-LQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l-~~~~~~~~~~gv~Vv~VS~D 223 (276)
.++++++.|| ...||+|..-.+.+ .++.+++. ..+.+..+..+
T Consensus 16 ~~~~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVF-SYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEE-CTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEECT
T ss_pred CCCcEEEEEE-eCcCcchhhCcHHHHHHHHHhCC-CceEEEEEecC
Confidence 3567888899 79999999999888 77777664 34677666554
No 394
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=85.23 E-value=1.4 Score=32.10 Aligned_cols=46 Identities=22% Similarity=0.353 Sum_probs=34.2
Q ss_pred EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 25 ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 25 sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.|.+.++++.||+. |+| ||++-.+|++...+. |++.+++.+.|+..
T Consensus 59 ~d~~~~l~~~~~V~--------~~P-----T~~~~~~G~~v~~~~-----G~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 59 VDECEDIAQDNQIA--------CMP-----TFLFMKNGQKLDSLS-----GANYDKLLELVEKN 104 (105)
T ss_dssp TTTCHHHHHHTTCC--------BSS-----EEEEEETTEEEEEEE-----SCCHHHHHHHHHHH
T ss_pred cccCHHHHHHcCCC--------eec-----EEEEEECCEEEEEEe-----CcCHHHHHHHHHhc
Confidence 46788999999985 443 455558999877665 57889988888653
No 395
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=84.96 E-value=3 Score=30.45 Aligned_cols=54 Identities=17% Similarity=0.253 Sum_probs=37.1
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 63 ~v~~~~vd~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 63 KVVMAKVDIDDHTDLAIEYEVS--------AV----PTVLAM-KNGDVVDKFVGI----KDEDQLEAFLKKL 117 (119)
T ss_dssp SSEEEEEETTTTHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCHHHHHHcCCC--------cc----cEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 4555333 35677899999985 44 377777 899987766532 3578888888764
No 396
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=84.63 E-value=3.4 Score=28.99 Aligned_cols=54 Identities=15% Similarity=0.231 Sum_probs=38.4
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 53 ~~~~~~v~~~~~~~~~~~~~i~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 107 (109)
T 3tco_A 53 KAVFGRLNVDENQKIADKYSVL--------NI----PTTLIF-VNGQLVDSLVGA----VDEDTLESTVNKY 107 (109)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CceEEEEccccCHHHHHhcCcc--------cC----CEEEEE-cCCcEEEeeecc----CCHHHHHHHHHHH
Confidence 4555333 45778999999985 44 478888 899988776533 3578888888764
No 397
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=84.56 E-value=2.5 Score=34.07 Aligned_cols=51 Identities=16% Similarity=0.193 Sum_probs=35.0
Q ss_pred eCccHHHHHh--------CCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCC----CCHHHHHHHHHhh
Q psy1172 26 DQDRSLAVQL--------GMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTG----RNFDEILRVLDSL 88 (276)
Q Consensus 26 D~~~~va~~y--------G~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~----r~~~eilr~l~~l 88 (276)
|....+++.| |+- |+ ++++++||+|++.+...|-...+ ..+.++|+.+..+
T Consensus 83 de~~~l~~~y~~~~q~~~gv~--------g~----Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~ 145 (173)
T 3ira_A 83 EERPDIDNIYMTVCQIILGRG--------GW----PLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEI 145 (173)
T ss_dssp TTCHHHHHHHHHHHHHHHSCC--------CS----SEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHcCCC--------CC----cceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHH
Confidence 3456888888 653 55 49999999999998765532222 2577777777543
No 398
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=84.52 E-value=4.9 Score=27.99 Aligned_cols=54 Identities=13% Similarity=0.145 Sum_probs=37.0
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ +++++++ +|++...+.. .++.+++.+.|+.+
T Consensus 51 ~~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~g----~~~~~~l~~~l~~~ 105 (106)
T 3die_A 51 KADILKLDVDENPSTAAKYEVM--------SI----PTLIVFK-DGQPVDKVVG----FQPKENLAEVLDKH 105 (106)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SB----SEEEEEE-TTEEEEEEES----CCCHHHHHHHHHTT
T ss_pred CcEEEEEECCcCHHHHHhCCCc--------cc----CEEEEEe-CCeEEEEEeC----CCCHHHHHHHHHHh
Confidence 3665333 36788999999984 44 4677775 9988776653 34578888888654
No 399
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=84.07 E-value=1.8 Score=32.03 Aligned_cols=32 Identities=13% Similarity=0.114 Sum_probs=21.1
Q ss_pred EEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 184 ILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
|+.|. .+|||+|.+-..-|.+ .|+..-.+.+|
T Consensus 19 v~vy~-~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd 50 (114)
T 3h8q_A 19 VVIFS-KSYCPHSTRVKELFSS-------LGVECNVLELD 50 (114)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEE-cCCCCcHHHHHHHHHH-------cCCCcEEEEec
Confidence 33466 8999999977666654 45555555555
No 400
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=83.61 E-value=1.1 Score=35.31 Aligned_cols=45 Identities=18% Similarity=0.098 Sum_probs=33.3
Q ss_pred ecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEE
Q psy1172 174 LECSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIAL 220 (276)
Q Consensus 174 l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~V 220 (276)
|...-.++++|+-|+ .--||+|.+-.+.+.++.+++.+. +.++-+
T Consensus 15 l~~p~~~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~ 59 (184)
T 4dvc_A 15 LKTPASSSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPEG-AKFQKN 59 (184)
T ss_dssp CSSCCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTT-CEEEEE
T ss_pred CCCCCCCCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCCc-eEEEEE
Confidence 343345788999999 899999999888888888877543 444443
No 401
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=82.64 E-value=6 Score=27.19 Aligned_cols=53 Identities=13% Similarity=0.236 Sum_probs=36.8
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 48 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 48 VGFGKLNSDENPDIAARYGVM--------SL----PTVIFF-KDGEPVDEIIGA----VPREEIEIRIKNL 101 (104)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----CEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred ceEEEEECCCCHHHHHhCCcc--------cc----CEEEEE-ECCeEhhhccCC----CCHHHHHHHHHHH
Confidence 555433 36778999999974 33 477777 899988766532 3578888887765
No 402
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=82.57 E-value=5.4 Score=28.25 Aligned_cols=54 Identities=15% Similarity=0.313 Sum_probs=35.9
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++| + |++.++|++...+... ++.+++.+.|+++
T Consensus 55 ~~~~~~v~~~~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~G~----~~~~~l~~~l~~~ 109 (112)
T 1t00_A 55 KIEIVKLNIDENPGTAAKYGVM--------SIP----T-LNVYQGGEVAKTIVGA----KPKAAIVRDLEDF 109 (112)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEESC----CCHHHHHHHTHHH
T ss_pred CeEEEEEEcCCCHHHHHhCCCC--------ccc----E-EEEEeCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 4555333 36678999999984 443 4 4445899998766533 3477888877764
No 403
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=82.33 E-value=4.7 Score=28.56 Aligned_cols=53 Identities=17% Similarity=0.259 Sum_probs=35.9
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++| + |++.++|++...+. |.+.+++.+.|+++
T Consensus 56 ~~~~~~vd~~~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----G~~~~~l~~~l~~~ 109 (112)
T 1ep7_A 56 KVIFLKVDVDAVAAVAEAAGIT--------AMP----T-FHVYKDGVKADDLV-----GASQDKLKALVAKH 109 (112)
T ss_dssp TSEEEEEETTTTHHHHHHHTCC--------BSS----E-EEEEETTEEEEEEE-----SCCHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHcCCC--------ccc----E-EEEEECCeEEEEEc-----CCCHHHHHHHHHHH
Confidence 4555333 35677999999984 443 4 55668999887665 33578888887765
No 404
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=81.02 E-value=3.8 Score=28.32 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=25.9
Q ss_pred EEEEcCC----CCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC------ChHHHHHHHHHH
Q psy1172 185 LFSHPSD----FTPVCTTELARVLQLIKEFEQRTCKVIALSCD------SVESHHDWIKAL 235 (276)
Q Consensus 185 L~f~pa~----~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D------~~~~~~~~~~~~ 235 (276)
+.|. .+ +||.|.+-..-|+ ++|+..-.+.++ +++..+++.+..
T Consensus 3 ~iY~-~~~~~~~Cp~C~~ak~~L~-------~~gi~y~~idI~~~~~~~~~~~~~~l~~~~ 55 (87)
T 1aba_A 3 KVYG-YDSNIHKCGPCDNAKRLLT-------VKKQPFEFINIMPEKGVFDDEKIAELLTKL 55 (87)
T ss_dssp EEEE-CCTTTSCCHHHHHHHHHHH-------HTTCCEEEEESCSBTTBCCHHHHHHHHHHH
T ss_pred EEEE-eCCCCCcCccHHHHHHHHH-------HcCCCEEEEEeeccccccCHHHHHHHHHHh
Confidence 3444 78 9999987655554 356666666665 344444444444
No 405
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=80.97 E-value=1.1 Score=35.23 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=25.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEE
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIAL 220 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~V 220 (276)
.++.+|+.|. ..+||+|++-.+.|.++ .++.|+-+
T Consensus 13 ~a~~~vv~f~-D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 13 NGKLKVAVFS-DPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TCCEEEEEEE-CTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHhhc------CceEEEEE
Confidence 4677788888 99999999988887653 34655543
No 406
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=80.89 E-value=2.8 Score=30.58 Aligned_cols=53 Identities=19% Similarity=0.414 Sum_probs=36.3
Q ss_pred CCceEEE-e-CccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPIIA-D-QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fplls-D-~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|--+. | .+.++++.||+. ++| ||+++++|++...+. |.+.+++.+.|+++.
T Consensus 69 ~~~~~vd~~~~~~~~~~~~~v~--------~~P-----t~~~~~~G~~~~~~~-----G~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 69 VIFLKLDCNQENKTLAKELGIR--------VVP-----TFKILKENSVVGEVT-----GAKYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEECSSTTHHHHHHHCCS--------SSS-----EEEEEETTEEEEEEE-----SSCHHHHHHHHHHHT
T ss_pred CEEEEEecCcchHHHHHHcCCC--------eee-----EEEEEeCCcEEEEEc-----CCCHHHHHHHHHHhh
Confidence 5553332 3 567899999984 443 477779999887665 334788888887653
No 407
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=80.62 E-value=8.3 Score=26.66 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=35.1
Q ss_pred CCCceE-EEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPI-IADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpl-lsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-. -.|.+.++++.||+. ++| ++ ++.++|++...+.... +.+++.+.|+++
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~--------~~P----t~-~~~~~g~~~~~~~G~~----~~~~l~~~l~~~ 104 (105)
T 1fb6_A 50 KIAVYKLNTDEAPGIATQYNIR--------SIP----TV-LFFKNGERKESIIGAV----PKSTLTDSIEKY 104 (105)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SSS----EE-EEEETTEEEEEEEECC----CHHHHHHHHHHH
T ss_pred ceEEEEEcCcchHHHHHhCCCC--------ccc----EE-EEEeCCeEEEEEecCC----CHHHHHHHHHhh
Confidence 355433 335677899999974 443 44 4447999987766433 467777777654
No 408
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=80.54 E-value=2.2 Score=31.88 Aligned_cols=54 Identities=17% Similarity=0.250 Sum_probs=36.9
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 72 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 72 KLTVAKLNIDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 126 (128)
T ss_dssp TEEEEEEETTTCCTTSGGGTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CeEEEEEECCCCHHHHHHcCCC--------cc----CEEEEE-eCCEEEEEEcCC----CCHHHHHHHHHHh
Confidence 3554333 35677888888874 44 488888 899988766532 3578888888764
No 409
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=80.11 E-value=3.9 Score=29.32 Aligned_cols=52 Identities=13% Similarity=0.138 Sum_probs=36.4
Q ss_pred CCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|- +=.|.+.++++.||+. ++ +++++++ +|++...+. |.+.+++.+.|+++
T Consensus 56 ~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~-----G~~~~~l~~~i~~~ 108 (109)
T 3f3q_A 56 ADFYKLDVDELGDVAQKNEVS--------AM----PTLLLFK-NGKEVAKVV-----GANPAAIKQAIAAN 108 (109)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEE-TTEEEEEEE-----SSCHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHcCCC--------cc----CEEEEEE-CCEEEEEEe-----CCCHHHHHHHHHhh
Confidence 5553 3356778999999985 44 4777777 998877665 33567888777654
No 410
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=79.90 E-value=3.5 Score=31.71 Aligned_cols=54 Identities=6% Similarity=0.113 Sum_probs=39.1
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ +++++++ +|++...+. |.+.+++.+.|+.+.
T Consensus 63 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~-----G~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 63 QVSFVKLEAEGVPEVSEKYEIS--------SV----PTFLFFK-NSQKIDRLD-----GAHAPELTKKVQRHA 117 (153)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC--------SS----SEEEEEE-TTEEEEEEE-----SSCHHHHHHHHHHHS
T ss_pred CeEEEEEECCCCHHHHHHcCCC--------CC----CEEEEEE-CCEEEEEEe-----CCCHHHHHHHHHHHh
Confidence 3555433 35677899999975 44 4899999 999877654 446788888888765
No 411
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=79.12 E-value=3.3 Score=28.22 Aligned_cols=20 Identities=10% Similarity=0.069 Sum_probs=14.8
Q ss_pred EEEEEcCCCCcccHHHHHHHH
Q psy1172 184 ILFSHPSDFTPVCTTELARVL 204 (276)
Q Consensus 184 vL~f~pa~~cp~C~~el~~l~ 204 (276)
|+.|+ ..|||+|++-...|.
T Consensus 6 v~ly~-~~~Cp~C~~~~~~L~ 25 (89)
T 3msz_A 6 VKIYT-RNGCPYCVWAKQWFE 25 (89)
T ss_dssp EEEEE-CTTCHHHHHHHHHHH
T ss_pred EEEEE-cCCChhHHHHHHHHH
Confidence 55556 899999998766554
No 412
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=78.94 E-value=1.5 Score=33.49 Aligned_cols=20 Identities=10% Similarity=0.394 Sum_probs=14.7
Q ss_pred EEEEEcCCCCcccHHH-HHHHH
Q psy1172 184 ILFSHPSDFTPVCTTE-LARVL 204 (276)
Q Consensus 184 vL~f~pa~~cp~C~~e-l~~l~ 204 (276)
|+.|+ ..|||+|.+- .+.|.
T Consensus 39 Vvvy~-~~~Cp~C~~a~k~~L~ 59 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKATLSTLFQ 59 (129)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHT
T ss_pred EEEEE-CCCCCchHHHHHHHHH
Confidence 55667 8999999977 44444
No 413
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=78.57 E-value=3.7 Score=30.78 Aligned_cols=47 Identities=15% Similarity=0.155 Sum_probs=33.3
Q ss_pred eCccHHHHHhCCCCCCCCCCCCCCcccceEEEE-CCCCc--EEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 26 DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFII-DPAKK--LRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 26 D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiI-dp~g~--I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|.+.++++.||+. ++ ++++++ |++|. +...+. |.+.+++.+.|+.+.
T Consensus 79 ~~~~~l~~~~~v~--------~~----Pt~~~~~~~~g~g~~~~~~~-----G~~~~~l~~~l~~~l 128 (133)
T 3cxg_A 79 DIHPKLNDQHNIK--------AL----PTFEFYFNLNNEWVLVHTVE-----GANQNDIEKAFQKYC 128 (133)
T ss_dssp TTCHHHHHHTTCC--------SS----SEEEEEEEETTEEEEEEEEE-----SCCHHHHHHHHHHHS
T ss_pred cchHHHHHhcCCC--------CC----CEEEEEEecCCCeEEEEEEc-----CCCHHHHHHHHHHHH
Confidence 5677899999974 44 477777 55666 666654 335888998888764
No 414
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=78.52 E-value=0.76 Score=36.18 Aligned_cols=42 Identities=12% Similarity=0.072 Sum_probs=29.8
Q ss_pred HHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 32 AVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 32 a~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.||+. |+ ++++|||++|+|+....... .+.+++++.|+.+
T Consensus 123 ~~~~~v~--------~~----Pt~~lid~~G~~~~~~~G~~---~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 123 RVKFGAN--------AQ----PFYVLIDNEGNPLNKSYAYD---EDISKYINFLQTG 164 (172)
T ss_dssp HHHHSCC--------CS----SEEEEECTTSCBSSCCBCSC---CCHHHHHHHHHHH
T ss_pred HHHcCCC--------Cc----ceEEEECCCCCEEeeccCCC---CCHHHHHHHHHHH
Confidence 6888875 44 59999999999876654221 2378887777654
No 415
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=77.45 E-value=4.8 Score=29.69 Aligned_cols=46 Identities=22% Similarity=0.333 Sum_probs=32.9
Q ss_pred EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 25 ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 25 sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.|.+.++++.||+. ++| + |++.++|++...+. |.+.+++.+.|+++
T Consensus 77 ~d~~~~l~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----G~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 77 TDELKSVASDWAIQ--------AMP----T-FMFLKEGKILDKVV-----GAKKDELQSTIAKH 122 (124)
T ss_dssp TTTSHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEE-----SCCHHHHHHHHHHH
T ss_pred CccCHHHHHHcCCC--------ccC----E-EEEEECCEEEEEEe-----CCCHHHHHHHHHHh
Confidence 35677999999974 443 4 55558999987665 34678888888765
No 416
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=77.15 E-value=5.4 Score=31.32 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=32.5
Q ss_pred cHHHHHhCCCCCCCCCCCCCCcccceEEEECCC-CcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 29 RSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPA-KKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 29 ~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~-g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
..+++.|++. |+ +++++|||+ |.....+. |.+.+++++.|+.+.
T Consensus 91 ~~l~~~y~v~--------~~----P~~~fld~~~G~~l~~~~-----g~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 91 QRYIQFYKLG--------DF----PYVSILDPRTGQKLVEWH-----QLDVSSFLDQVTGFL 135 (153)
T ss_dssp HHHHHHHTCC--------SS----SEEEEECTTTCCCCEEES-----SCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCC--------CC----CEEEEEeCCCCcEeeecC-----CCCHHHHHHHHHHHH
Confidence 4688899984 44 489999999 85544432 468999999887764
No 417
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=77.10 E-value=2.1 Score=33.09 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=33.5
Q ss_pred EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 23 IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 23 llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|=.|.+.++++.||+. ++ ++++++ .+|++...+.. .++.+++.+.|+.+.
T Consensus 75 Vd~d~~~~la~~~~V~--------~i----PT~~~f-k~G~~v~~~~G----~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 75 ADLEQSEAIGDRFNVR--------RF----PATLVF-TDGKLRGALSG----IHPWAELLTLMRSIV 124 (142)
T ss_dssp ECHHHHHHHHHTTTCC--------SS----SEEEEE-SCC----CEES----CCCHHHHHHHHHHHH
T ss_pred EECCCCHHHHHhcCCC--------cC----CeEEEE-eCCEEEEEEeC----CCCHHHHHHHHHHHh
Confidence 3356778999999985 44 488888 89998776553 245788888887764
No 418
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=76.97 E-value=4.7 Score=28.11 Aligned_cols=53 Identities=17% Similarity=0.254 Sum_probs=34.4
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++| + |++.++|++...+. |.+.+++.+.|+++
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----g~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 52 NVVVLKVDVDECEDIAMEYNIS--------SMP----T-FVFLKNGVKVEEFA-----GANAKRLEDVIKAN 105 (106)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEE-----SCCHHHHHHHHHHT
T ss_pred CeEEEEEeccchHHHHHHcCCC--------ccc----E-EEEEcCCcEEEEEc-----CCCHHHHHHHHHHh
Confidence 3444222 35677899999974 443 4 55558999877664 34677777777654
No 419
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=76.86 E-value=2.5 Score=31.33 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=34.7
Q ss_pred EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 25 ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 25 sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
.|.+.++++.||+. |+ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 75 ~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 75 IDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 121 (123)
T ss_dssp TTSCTTTGGGGTCC--------BS----SEEEEE-ESSSEEEEEESC----CCHHHHHHHHTTT
T ss_pred CCCCHHHHHHcCCC--------cc----CEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 46777899999974 44 478888 899998766533 3578888888764
No 420
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=76.53 E-value=6.9 Score=28.31 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=35.6
Q ss_pred CCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|- +=.|.+.++++.||+. ++| +++++ ++|++...+. |.+.+++.+.|+.+
T Consensus 63 v~~~~vd~d~~~~l~~~~~v~--------~~P----t~~~~-~~G~~~~~~~-----G~~~~~l~~~l~~~ 115 (116)
T 3qfa_C 63 VIFLEVDVDDCQDVASECEVK--------SMP----TFQFF-KKGQKVGEFS-----GANKEKLEATINEL 115 (116)
T ss_dssp SEEEEEETTTTHHHHHHTTCC--------SSS----EEEEE-SSSSEEEEEE-----SCCHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHcCCc--------ccc----EEEEE-eCCeEEEEEc-----CCCHHHHHHHHHHh
Confidence 5542 3346778999999985 443 55555 7999877665 33688888888754
No 421
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=75.76 E-value=9.8 Score=28.34 Aligned_cols=54 Identities=11% Similarity=0.142 Sum_probs=36.7
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 82 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~i~~~ 136 (140)
T 1v98_A 82 RLKVVKVNVDEHPGLAARYGVR--------SV----PTLVLF-RRGAPVATWVGA----SPRRVLEERLRPY 136 (140)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred ceEEEEEECCCCHHHHHHCCCC--------cc----CEEEEE-eCCcEEEEEeCC----CCHHHHHHHHHHH
Confidence 4555333 35677899999974 44 366666 799988766533 3478888888765
No 422
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=74.77 E-value=11 Score=28.28 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=38.4
Q ss_pred CCCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.++.|-.+ .|.+.++++.||+. ++ ++++++ .+|++...+.. .++.+++.+.|+.+-
T Consensus 86 ~~~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G----~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 86 GKVRFVKVNTEAEPALSTRFRIR--------SI----PTIMLY-RNGKMIDMLNG----AVPKAPFDNWLDEQL 142 (148)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEESS----CCCHHHHHHHHHHHH
T ss_pred CceEEEEEECcCCHHHHHHCCCC--------cc----CEEEEE-ECCeEEEEEeC----CCCHHHHHHHHHHHh
Confidence 34666444 46778999999985 44 366666 69998776543 246888888887653
No 423
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=74.14 E-value=11 Score=26.85 Aligned_cols=54 Identities=11% Similarity=0.200 Sum_probs=36.0
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~i~--------~~----Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 62 DLTVAKLDVDTNPETARNFQVV--------SI----PTLILF-KDGQPVKRIVGA----KGKAALLRELSDV 116 (121)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHTCSC
T ss_pred CeEEEEEECCCCHHHHHhcCCC--------cC----CEEEEE-ECCEEEEEecCC----CCHHHHHHHHHHH
Confidence 4665433 36678999999984 44 355555 699987766532 3477888888765
No 424
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=73.97 E-value=6.4 Score=27.72 Aligned_cols=53 Identities=11% Similarity=0.097 Sum_probs=28.8
Q ss_pred CCc-eEEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPY-PIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~f-pllsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.| -+=.|.+.++++.||+. ++ +++++++ +|++....... ++.+++.+.|+++
T Consensus 50 ~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~g~----~~~~~l~~~l~~~ 103 (105)
T 4euy_A 50 VEKIEILLQDMQEIAGRYAVF--------TG----PTVLLFY-NGKEILRESRF----ISLENLERTIQLF 103 (105)
T ss_dssp EEEEEEEECCC---------C--------CC----CEEEEEE-TTEEEEEEESS----CCHHHHHHHHHTT
T ss_pred ceEEEEECCCCHHHHHhcCCC--------CC----CEEEEEe-CCeEEEEEeCC----cCHHHHHHHHHHh
Confidence 444 23357788999999974 44 4777774 99887766533 3588888888765
No 425
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=73.39 E-value=14 Score=28.36 Aligned_cols=55 Identities=11% Similarity=0.102 Sum_probs=38.3
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+... .+.+++.+.|+.+-
T Consensus 96 ~v~~~~vd~~~~~~l~~~~~i~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 96 QVRLAKIDTQAHPAVAGRHRIQ--------GI----PAFILF-HKGRELARAAGA----RPASELVGFVRGKL 151 (155)
T ss_dssp TCEEEEEETTTSTHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred CEEEEEEeCCccHHHHHHcCCC--------cC----CEEEEE-eCCeEEEEecCC----CCHHHHHHHHHHHh
Confidence 4665433 35677999999974 44 477777 799988766532 35788888887653
No 426
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=73.32 E-value=17 Score=25.32 Aligned_cols=54 Identities=7% Similarity=0.235 Sum_probs=36.8
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ .+|++...+... ++.+++.+.|+.+
T Consensus 54 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 54 SFGFYYVDVEEEKTLFQRFSLK--------GV----PQILYF-KDGEYKGKMAGD----VEDDEVEQMIADV 108 (111)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SS----CEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHH
T ss_pred ceEEEEEECCcChhHHHhcCCC--------cC----CEEEEE-ECCEEEEEEecc----CCHHHHHHHHHHH
Confidence 4665333 35677899999974 34 477777 689887665532 4678888888764
No 427
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=73.29 E-value=7.3 Score=27.97 Aligned_cols=45 Identities=16% Similarity=0.242 Sum_probs=31.5
Q ss_pred eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 26 DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 26 D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
|.+.++++.||+. ++| + |++.++|++...+. |.+.+++.+.|+++
T Consensus 72 ~~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----G~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 72 DKLEETARKYNIS--------AMP----T-FIAIKNGEKVGDVV-----GASIAKVEDMIKKF 116 (117)
T ss_dssp TTSHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEE-----SSCHHHHHHHHHHH
T ss_pred CccHHHHHHcCCC--------ccc----e-EEEEeCCcEEEEEe-----CCCHHHHHHHHHHh
Confidence 5667899999974 443 4 55558999877665 34677888777654
No 428
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=73.03 E-value=7.4 Score=27.80 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=38.1
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... .+.+++.+.|++.+
T Consensus 50 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~v~~~~G~----~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 50 QVAISSVDSEARPELMKELGFE--------RV----PTLVFI-RDGKVAKVFSGI----MNPRELQALYASIH 105 (110)
T ss_dssp TSCEEEEEGGGCHHHHHHTTCC--------SS----CEEEEE-ESSSEEEEEESC----CCHHHHHHHHHTC-
T ss_pred CcEEEEEcCcCCHHHHHHcCCc--------cc----CEEEEE-ECCEEEEEEcCC----CCHHHHHHHHHHHh
Confidence 3555433 35677899999974 44 488888 899988766532 35888888887664
No 429
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.86 E-value=8.7 Score=28.10 Aligned_cols=38 Identities=5% Similarity=0.009 Sum_probs=21.5
Q ss_pred EEEEEcCCCCcccHH-HHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 184 ILFSHPSDFTPVCTT-ELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 184 vL~f~pa~~cp~C~~-el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
|+.|. .++||.|.. +.. ++.-+-++++|+.+.-+.++.
T Consensus 10 V~vy~-~~~C~~C~~~~~~--~~ak~~L~~~gi~y~~vdI~~ 48 (111)
T 2ct6_A 10 IRVFI-ASSSGFVAIKKKQ--QDVVRFLEANKIEFEEVDITM 48 (111)
T ss_dssp EEEEE-CSSCSCHHHHHHH--HHHHHHHHHTTCCEEEEETTT
T ss_pred EEEEE-cCCCCCcccchhH--HHHHHHHHHcCCCEEEEECCC
Confidence 44445 899999993 111 011122345777777777764
No 430
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=71.84 E-value=6.7 Score=29.17 Aligned_cols=53 Identities=11% Similarity=0.180 Sum_probs=36.2
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+.. .+.+++.+.|+++.
T Consensus 78 v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~~ 131 (139)
T 3d22_A 78 LMFLVIDVDELSDFSASWEIK--------AT----PTFFFL-RDGQQVDKLVG-----ANKPELHKKITAIL 131 (139)
T ss_dssp SEEEEEETTTSHHHHHHTTCC--------EE----SEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHHH
T ss_pred CEEEEEeCcccHHHHHHcCCC--------cc----cEEEEE-cCCeEEEEEeC-----CCHHHHHHHHHHHh
Confidence 555333 46778999999985 34 355555 89999877653 25678888887654
No 431
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=71.30 E-value=6.2 Score=29.03 Aligned_cols=46 Identities=11% Similarity=0.207 Sum_probs=33.6
Q ss_pred EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHh
Q psy1172 25 ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDS 87 (276)
Q Consensus 25 sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~ 87 (276)
.|.+.++++.||+. |+ ++++++ ++|++...+.. .++.+++.+.|+.
T Consensus 82 ~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G----~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 82 LDKNESLARKFSVK--------SL----PTIILL-KNKTMLARKDH----FVSSNDLIALIKK 127 (128)
T ss_dssp GGGCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEESS----CCCHHHHHHHHTT
T ss_pred CCCCHHHHHHcCCC--------Cc----CEEEEE-ECCEEEEEecC----CCCHHHHHHHHHh
Confidence 45777999999984 44 488888 68988776543 3568888887754
No 432
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=71.13 E-value=9.7 Score=26.25 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|-.+ .|.+.++++.||+. ++ ++++++ .+|++...+. |.+.+++.+.|+++
T Consensus 51 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~-----G~~~~~l~~~l~~~ 103 (104)
T 2vim_A 51 VEFAKVDVDQNEEAAAKYSVT--------AM----PTFVFI-KDGKEVDRFS-----GANETKLRETITRH 103 (104)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEE-----SSCHHHHHHHHHHH
T ss_pred CEEEEEeccCCHHHHHHcCCc--------cc----cEEEEE-eCCcEEEEEe-----CCCHHHHHHHHHhh
Confidence 555333 24567899999974 34 354444 5999877665 34678888887654
No 433
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=71.02 E-value=5.7 Score=31.51 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=29.0
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHH-HHHHHHHhC-CcEEEEEe
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVL-QLIKEFEQR-TCKVIALS 221 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~-~~~~~~~~~-gv~Vv~VS 221 (276)
++..|+.|+ ..-||+|..-.+.+. ++.++|.+. ++.|+-..
T Consensus 11 a~~~i~~f~-D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 11 GKPLVVVYG-DYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp CCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCeEEEEEE-CCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 456677777 999999999999884 455666543 36666543
No 434
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=70.92 E-value=3.7 Score=33.09 Aligned_cols=41 Identities=7% Similarity=-0.054 Sum_probs=29.1
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEe
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALS 221 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS 221 (276)
++.+|+.|+ .--||+|.+-.+.+.+..+++....+.|+--.
T Consensus 14 a~vtiv~f~-D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 14 GPRLFEVFL-EPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 445555555 88999999998888887777623347777554
No 435
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.43 E-value=9.3 Score=27.85 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=36.8
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|-.+ .|.+.++++.||+. ++ ++++++++ |++...+.. .++.+++.+.|+.+-
T Consensus 62 ~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~~-g~~~~~~~G----~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 62 VKLAAVDATVNQVLASRYGIR--------GF----PTIKIFQK-GESPVDYDG----GRTRSDIVSRALDLF 116 (133)
T ss_dssp EEEEEEETTTCCHHHHHHTCC--------SS----SEEEEEET-TEEEEEECS----CCSHHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHhCCCC--------ee----CeEEEEeC-CCceEEecC----CCCHHHHHHHHHHHh
Confidence 444333 35677999999984 44 58999987 776554432 356889988887754
No 436
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=70.16 E-value=7.7 Score=27.94 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=34.8
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|--+ .|.+.++++.||+. ++| + |++.++|++...+.. ...+++.+.|+.+.
T Consensus 66 ~~~~~vd~~~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~G-----~~~~~l~~~l~~~l 119 (122)
T 2vlu_A 66 AVFLKVDVDELKPIAEQFSVE--------AMP----T-FLFMKEGDVKDRVVG-----AIKEELTAKVGLHA 119 (122)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEES-----SCHHHHHHHHHHHH
T ss_pred cEEEEEECCCCHHHHHHcCCC--------ccc----E-EEEEeCCEEEEEEeC-----cCHHHHHHHHHHHh
Confidence 555333 35677899999984 443 4 555589998876652 22677777777653
No 437
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=69.54 E-value=9.8 Score=26.99 Aligned_cols=53 Identities=19% Similarity=0.231 Sum_probs=35.6
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|-.+ .|.+.++++.||+. ++| +++++ ++|++...+. |.+.+++.+.|+++.
T Consensus 60 ~~~~~v~~~~~~~~~~~~~v~--------~~P----t~~~~-~~g~~~~~~~-----g~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 60 AIFLKVDVDELKDVAEAYNVE--------AMP----TFLFI-KDGEKVDSVV-----GGRKDDIHTKIVALM 113 (118)
T ss_dssp SEEEEEETTTSHHHHHHTTCC--------SBS----EEEEE-ETTEEEEEEE-----SCCHHHHHHHHHHHH
T ss_pred cEEEEEEcccCHHHHHHcCCC--------cCc----EEEEE-eCCeEEEEec-----CCCHHHHHHHHHHHh
Confidence 555333 35677899999974 443 54444 7999877654 346788888887754
No 438
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=69.33 E-value=9.7 Score=28.13 Aligned_cols=53 Identities=21% Similarity=0.376 Sum_probs=35.7
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|-.+ .|.+.++++.||+. ++| + |++.++|++...+. |.+.+++.+.|+.+.
T Consensus 69 v~~~~vd~d~~~~l~~~~~v~--------~~P----t-~~i~~~G~~~~~~~-----G~~~~~l~~~l~~~l 122 (125)
T 1r26_A 69 VKFAKVDADNNSEIVSKCRVL--------QLP----T-FIIARSGKMLGHVI-----GANPGMLRQKLRDII 122 (125)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEE-----SSCHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHcCCC--------ccc----E-EEEEeCCeEEEEEe-----CCCHHHHHHHHHHHh
Confidence 555333 35677899999974 443 4 45558999877665 346788888887653
No 439
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=69.09 E-value=6.2 Score=28.84 Aligned_cols=54 Identities=24% Similarity=0.302 Sum_probs=36.6
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|-.+ .|.+.++++.||+. ++ +++++++++|.+...+. -.++.+++++.|...
T Consensus 68 ~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~~~~~~~~~~~----G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 68 VKVGAVNADKHQSLGGQYGVQ--------GF----PTIKIFGANKNKPEDYQ----GGRTGEAIVDAALSA 122 (130)
T ss_dssp SEEEEEETTTCHHHHHHHTCC--------SS----SEEEEESSCTTSCEECC----SCCSHHHHHHHHHHH
T ss_pred eEEEEEeCCCCHHHHHHcCCC--------cc----CEEEEEeCCCCeEEEee----cCCCHHHHHHHHHHH
Confidence 555333 45677899999974 44 59999999998443332 245688888877654
No 440
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=68.66 E-value=11 Score=26.39 Aligned_cols=52 Identities=8% Similarity=-0.010 Sum_probs=33.8
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+. |.+.+++.+.|+++
T Consensus 53 ~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~-----G~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 53 AVFLEVDVHQCQGTAATNNIS--------AT----PTFQFF-RNKVRIDQYQ-----GADAVGLEEKIKQH 105 (107)
T ss_dssp SEEEEEETTTSHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEE-----SSCHHHHHHHHHHH
T ss_pred cEEEEEECccCHHHHHhcCCC--------cc----cEEEEE-ECCeEEEEEe-----CCCHHHHHHHHHHh
Confidence 554333 35677899999974 44 355556 7998877654 44566777777654
No 441
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=68.18 E-value=11 Score=26.30 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=19.7
Q ss_pred EEEEEcCCCCcccH-----HHHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy1172 184 ILFSHPSDFTPVCT-----TELARVLQLIKEFEQRTCKVIALSCDS 224 (276)
Q Consensus 184 vL~f~pa~~cp~C~-----~el~~l~~~~~~~~~~gv~Vv~VS~D~ 224 (276)
|+.|. .++||.|. ..+..+ ++++|+.+.-+.++.
T Consensus 4 v~ly~-~~~C~~c~~~~~~~~ak~~------L~~~~i~~~~~di~~ 42 (93)
T 1t1v_A 4 LRVYS-TSVTGSREIKSQQSEVTRI------LDGKRIQYQLVDISQ 42 (93)
T ss_dssp EEEEE-CSSCSCHHHHHHHHHHHHH------HHHTTCCCEEEETTS
T ss_pred EEEEE-cCCCCCchhhHHHHHHHHH------HHHCCCceEEEECCC
Confidence 34445 89999993 222222 335677666666653
No 442
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=67.33 E-value=9.7 Score=28.70 Aligned_cols=52 Identities=12% Similarity=-0.037 Sum_probs=38.7
Q ss_pred cCCCCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
.|+|.||||++=.-. . . .+|..+.+.+.+.|+.+|||.-.+.+.+++++...
T Consensus 44 FF~~aPVVlDl~~l~-~---~---~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~ 95 (120)
T 3ghf_A 44 FLKHAPVVINVSGLE-S---P---VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRM 95 (120)
T ss_dssp HHTTCEEEEEEEECC-S---S---CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHH
T ss_pred hhCCCcEEEEccccC-C---h---HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHC
Confidence 378999999986332 1 1 34677778888999999999986666567777777
No 443
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=67.16 E-value=11 Score=30.85 Aligned_cols=49 Identities=14% Similarity=0.004 Sum_probs=32.6
Q ss_pred EEecccCCCCeEEEEEEcCCCCcccHHHHHHHHHHHH-HHHhC-CcEEEEEeC
Q psy1172 172 VILECSIPAFWGILFSHPSDFTPVCTTELARVLQLIK-EFEQR-TCKVIALSC 222 (276)
Q Consensus 172 v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~~~~-~~~~~-gv~Vv~VS~ 222 (276)
..+. .-.++.+|+.|+ .--||+|.+-.+.+....+ +|.+. .+.++-...
T Consensus 8 ~~~G-~~~a~vtivef~-D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 8 HLLG-NPAAKLRLVEFV-SYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEES-CTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred ceec-CCCCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 3444 334566777777 8899999998887766665 66333 366665543
No 444
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=67.07 E-value=12 Score=27.20 Aligned_cols=52 Identities=12% Similarity=0.272 Sum_probs=34.9
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|-.+ .|.+.++++.||+. ++| +++++ ++|++...+. |.+.+++.+.|+++
T Consensus 67 v~~~~vd~d~~~~~~~~~~v~--------~~P----t~~~~-~~G~~~~~~~-----G~~~~~l~~~l~~~ 119 (121)
T 2j23_A 67 VGFYKVDVDEQSQIAQEVGIR--------AMP----TFVFF-KNGQKIDTVV-----GADPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTTCHHHHHHHTCC--------SSS----EEEEE-ETTEEEEEEE-----SSCHHHHHHHHHHH
T ss_pred EEEEEEECcCCHHHHHHcCCC--------ccc----EEEEE-ECCeEEeeEc-----CCCHHHHHHHHHHh
Confidence 444333 45677999999974 443 55555 6999877665 22678888888765
No 445
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=66.44 E-value=11 Score=26.86 Aligned_cols=52 Identities=13% Similarity=0.257 Sum_probs=34.9
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|-.+ .|.+.++++.||+. ++| + |++.++|++...+. |.+.+++.+.|+++
T Consensus 58 v~~~~vd~~~~~~~~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----G~~~~~l~~~l~~~ 110 (112)
T 1syr_A 58 MVFIKVDVDEVSEVTEKENIT--------SMP----T-FKVYKNGSSVDTLL-----GANDSALKQLIEKY 110 (112)
T ss_dssp SEEEEEETTTTHHHHHHTTCC--------SSS----E-EEEEETTEEEEEEE-----SCCHHHHHHHHHTT
T ss_pred CEEEEEECCCCHHHHHHcCCC--------ccc----E-EEEEECCcEEEEEe-----CCCHHHHHHHHHHh
Confidence 555433 34567899999974 443 4 55557999877654 33688888888765
No 446
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=65.75 E-value=13 Score=25.71 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=35.0
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|--+ .|.+.++++.||+. ++ ++++++ .+|++...+. |.+.+++.+.|+++
T Consensus 52 ~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~-----g~~~~~l~~~l~~~ 104 (105)
T 3m9j_A 52 VIFLEVDVDDCQDVASESEVK--------SM----PTFQFF-KKGQKVGEFS-----GANKEKLEATINEL 104 (105)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------BS----SEEEEE-ETTEEEEEEE-----SSCHHHHHHHHHHH
T ss_pred eEEEEEEhhhhHHHHHHcCCC--------cC----cEEEEE-ECCeEEEEEe-----CCCHHHHHHHHHHh
Confidence 554333 35677999999984 33 477777 6888776655 33578888777653
No 447
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=65.58 E-value=5.8 Score=29.21 Aligned_cols=37 Identities=8% Similarity=-0.046 Sum_probs=23.3
Q ss_pred CCCCeEEEEEEcC-----CCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 178 IPAFWGILFSHPS-----DFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 178 ~~gk~vvL~f~pa-----~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
.+.++|+|+ - . +|||+|.+-..-|.+ +|+.+.-+.++
T Consensus 13 i~~~~Vvlf-~-kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~ 54 (111)
T 3zyw_A 13 THAAPCMLF-M-KGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIF 54 (111)
T ss_dssp HTSSSEEEE-E-SBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred HhcCCEEEE-E-ecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECc
Confidence 345565544 4 5 899999987666653 56655555554
No 448
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=65.52 E-value=3.8 Score=31.57 Aligned_cols=47 Identities=4% Similarity=-0.102 Sum_probs=27.6
Q ss_pred CeEEEEEEcC----CCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHHHHHH
Q psy1172 181 FWGILFSHPS----DFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHDWIKAL 235 (276)
Q Consensus 181 k~vvL~f~pa----~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~~~~~ 235 (276)
..|+|+.. + .|||+|.+-...|. +.|+.+..|.++ +++..+++.+..
T Consensus 35 ~~Vvvy~k-s~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~~d~~~~~~L~~~~ 86 (135)
T 2wci_A 35 NPILLYMK-GSPKLPSCGFSAQAVQALA-------ACGERFAYVDILQNPDIRAELPKYA 86 (135)
T ss_dssp CSEEEEES-BCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGGGCHHHHHHHHHHH
T ss_pred CCEEEEEE-ecCCCCCCccHHHHHHHHH-------HcCCceEEEECCCCHHHHHHHHHHH
Confidence 45555444 4 79999997766654 356666666665 344333444333
No 449
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=65.39 E-value=13 Score=26.82 Aligned_cols=51 Identities=16% Similarity=0.306 Sum_probs=33.1
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDS 87 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~ 87 (276)
+.|-.+ .|.+.++++.||+. ++| + |++.++|++...+. |...+++.+.|++
T Consensus 62 v~~~~vd~~~~~~l~~~~~v~--------~~P----t-~~~~~~G~~~~~~~-----G~~~~~l~~~l~~ 113 (114)
T 2oe3_A 62 VRFVKCDVDESPDIAKECEVT--------AMP----T-FVLGKDGQLIGKII-----GANPTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SBS----E-EEEEETTEEEEEEE-----SSCHHHHHHHHHT
T ss_pred CEEEEEECCCCHHHHHHCCCC--------ccc----E-EEEEeCCeEEEEEe-----CCCHHHHHHHHHh
Confidence 555333 35677899999974 443 4 44558999887665 2236777777764
No 450
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=65.23 E-value=7 Score=27.57 Aligned_cols=52 Identities=13% Similarity=0.202 Sum_probs=33.5
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|-.+ .|.+.++++.||+. ++| +++++ ++|++...+.. .+.+++.+.|+++
T Consensus 58 v~~~~v~~~~~~~~~~~~~v~--------~~P----t~~~~-~~G~~~~~~~g-----~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 58 VTFLKVDVDELKAVAEEWNVE--------AMP----TFIFL-KDGKLVDKTVG-----ADKDGLPTLVAKH 110 (113)
T ss_dssp EEEEEEETTTCHHHHHHHHCS--------STT----EEEEE-ETTEEEEEEEC-----CCTTHHHHHHHHH
T ss_pred cEEEEEEccccHHHHHhCCCC--------ccc----EEEEE-eCCEEEEEEec-----CCHHHHHHHHHHh
Confidence 554333 35677899999974 443 55555 79998876653 3456677776654
No 451
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=64.91 E-value=8.6 Score=27.91 Aligned_cols=57 Identities=16% Similarity=0.310 Sum_probs=38.3
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECC---CCcEEEEEecCCCCCCCHHHHHHHHHhhccc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDP---AKKLRLSFLYPATTGRNFDEILRVLDSLQLT 91 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp---~g~I~~~~~~~~~~~r~~~eilr~l~~lq~~ 91 (276)
++.|--+ .|.+.++++.||+. ++ +++++++. +|++...+. |....+|.+.++..+.+
T Consensus 54 ~v~~~~vd~~~~~~~~~~~~i~--------~~----Pt~~~~~~~~~~G~~~~~~~-----G~~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 54 DVTFIKVDVDKNGNAADAYGVS--------SI----PALFFVKKEGNEIKTLDQFV-----GADVSRIKADIEKFKHH 114 (118)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEEEETTEEEEEEEEE-----SCCHHHHHHHHHHHC--
T ss_pred CeEEEEEECCCCHHHHHhcCCC--------CC----CEEEEEeCCCCcceEEEeec-----CCCHHHHHHHHHHhhhc
Confidence 3555433 35677899999974 44 48888876 488877665 44567888888877644
No 452
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=64.57 E-value=13 Score=26.11 Aligned_cols=54 Identities=17% Similarity=0.323 Sum_probs=35.3
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|--+ .|.+.++++.||+. ++| +++++ .+|++...+. |.+.+++.+.|+.+.
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~v~--------~~P----t~~~~-~~G~~~~~~~-----G~~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 54 NVSFLSIDADENSEISELFEIS--------AVP----YFIII-HKGTILKELS-----GADPKEYVSLLEDCK 108 (112)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SSS----EEEEE-ETTEEEEEEC-----SCCHHHHHHHHHHHH
T ss_pred CEEEEEEecccCHHHHHHcCCC--------ccc----EEEEE-ECCEEEEEec-----CCCHHHHHHHHHHHH
Confidence 3665444 35677899999984 443 55555 7999877655 334567777776653
No 453
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.17 E-value=13 Score=26.93 Aligned_cols=54 Identities=7% Similarity=0.215 Sum_probs=37.3
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++. .+ .-.++.+++.+.|+.+.
T Consensus 55 ~v~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~---~~--~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 55 EVNIAKVDVTEQPGLSGRFIIN--------AL----PTIYHC-KDGEFR---RY--QGPRTKKDFINFISDKE 109 (126)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEE---EC--CSCCCHHHHHHHHHTCG
T ss_pred CeEEEEEECcCCHHHHHHcCCc--------cc----CEEEEE-eCCeEE---Ee--ecCCCHHHHHHHHHHHh
Confidence 4665444 45677899999974 44 478888 799852 22 22457899999998765
No 454
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=63.30 E-value=17 Score=29.74 Aligned_cols=54 Identities=15% Similarity=0.101 Sum_probs=37.0
Q ss_pred CCeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCCChHHHHHHHHHH
Q psy1172 180 AFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235 (276)
Q Consensus 180 gk~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D~~~~~~~~~~~~ 235 (276)
+.+.++.+|-..||+.|...++.+.+++++|+++ +.++.|..+... ....++.+
T Consensus 130 ~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~-~~~~l~~f 183 (227)
T 4f9z_D 130 VIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKE-NGKVISFF 183 (227)
T ss_dssp SCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGG-GHHHHHHT
T ss_pred CCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHh-HHHHHHHc
Confidence 3344444443668999999999999999999765 777777776432 23345555
No 455
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=67.06 E-value=1.5 Score=32.44 Aligned_cols=47 Identities=19% Similarity=0.208 Sum_probs=30.5
Q ss_pred CccHHHHHhCCCCCCCCCCCCCCcccceEEEECC-CCcE--EEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 27 QDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDP-AKKL--RLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 27 ~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp-~g~I--~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+.++++.||+. ++ ++++|+|+ +|++ ...+... ++.+++.+.|+.+.
T Consensus 66 ~~~~~~~~~~v~--------~~----Pt~~~~d~~~G~~~~~~~~~G~----~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 66 EGQELARRYRVP--------GT----PTFVFLVPKAGAWEEVGRLFGS----RPRAEFLKELRQVC 115 (130)
Confidence 456788888864 34 59999997 5988 4444322 24567777776653
No 456
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=62.53 E-value=6.9 Score=28.21 Aligned_cols=59 Identities=8% Similarity=0.040 Sum_probs=39.1
Q ss_pred CCCceEEE-eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPIIA-DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fplls-D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|--+. |.+.++++.||+. ++ +++++++++|.+....-+. ..+++.+++.+.|+++-
T Consensus 53 ~~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 53 KVRAGKVDCQAYPQTCQKAGIK--------AY----PSVKLYQYERAKKSIWEEQ-INSRDAKTIAALIYGKL 112 (122)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEEEEGGGTEEEEEE-ECCSCHHHHHHHHHHHH
T ss_pred CeEEEEEeCcCCHHHHHHcCCC--------cc----ceEEEEeCCCccceeeccc-cCcCCHHHHHHHHHHHH
Confidence 46664443 5677899999984 44 5899998888754333221 12357888988887754
No 457
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=62.14 E-value=12 Score=28.55 Aligned_cols=52 Identities=4% Similarity=-0.048 Sum_probs=34.7
Q ss_pred EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCC----C--CCCHHHHHHHHHhhc
Q psy1172 25 ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPAT----T--GRNFDEILRVLDSLQ 89 (276)
Q Consensus 25 sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~----~--~r~~~eilr~l~~lq 89 (276)
.|.+.++++.||+. ++ ++++ ++++|++..+...... . .++.+++.+.|+.+-
T Consensus 63 ~d~~~~l~~~~~v~--------~~----Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 63 VDQTAVYTQYFDIS--------YI----PSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTTCCHHHHHTTCC--------SS----SEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHcCCC--------cc----CeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 37888999999985 44 3555 7789998843332111 1 246788888888764
No 458
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=61.74 E-value=17 Score=27.08 Aligned_cols=38 Identities=8% Similarity=-0.024 Sum_probs=22.9
Q ss_pred CCCeEEEEEEcC----CCCcccHHHHHHHHHHHHHHHhCCcE---EEEEeCCC
Q psy1172 179 PAFWGILFSHPS----DFTPVCTTELARVLQLIKEFEQRTCK---VIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa----~~cp~C~~el~~l~~~~~~~~~~gv~---Vv~VS~D~ 224 (276)
+.++|+|+.- + .|||+|.+-..-|.+ .|+. +.-+.++.
T Consensus 14 ~~~~Vvvfsk-~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~ 58 (121)
T 3gx8_A 14 ESAPVVLFMK-GTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLE 58 (121)
T ss_dssp HSCSEEEEES-BCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTT
T ss_pred ccCCEEEEEe-ccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecC
Confidence 3455555444 4 399999987666654 3454 55555543
No 459
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=61.36 E-value=12 Score=27.89 Aligned_cols=47 Identities=6% Similarity=0.065 Sum_probs=31.8
Q ss_pred eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 26 DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 26 D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
|.+.++++.||+. ++ ++ |++..+|+++..+.... ..+.+.+.++.+.
T Consensus 79 d~~~~l~~~~~v~--------~~----Pt-~~~~~~G~~v~~~~G~~----~~~~~~~~i~~~~ 125 (135)
T 3emx_A 79 SAARLEMNKAGVE--------GT----PT-LVFYKEGRIVDKLVGAT----PWSLKVEKAREIY 125 (135)
T ss_dssp HHHHHHHHHHTCC--------SS----SE-EEEEETTEEEEEEESCC----CHHHHHHHHHHHC
T ss_pred hhhHHHHHHcCCc--------ee----Ce-EEEEcCCEEEEEEeCCC----CHHHHHHHHHHHh
Confidence 6678999999984 44 34 44445999988776433 3566666666654
No 460
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=61.03 E-value=17 Score=29.27 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=37.9
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+. -.++.+++.+.|+.+-
T Consensus 146 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~----G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 146 LLRIGAVNCGDDRMLCRMKGVN--------SY----PSLFIF-RSGMAAVKYN----GDRSKESLVAFAMQHV 201 (210)
T ss_dssp TBEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-CTTSCCEECC----SCCCHHHHHHHHHHHH
T ss_pred ceEEEEEECCccHHHHHHcCCC--------cC----CeEEEE-ECCCceeEec----CCCCHHHHHHHHHHhC
Confidence 4665444 35677899999984 44 477777 8999855433 2357889998887653
No 461
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=60.36 E-value=8.2 Score=28.09 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=23.2
Q ss_pred CCCCeEEEEEEcC----CCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 178 IPAFWGILFSHPS----DFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 178 ~~gk~vvL~f~pa----~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
.+.++|+|+.- + .+||+|.+-...|.+ .|+.+-.+.++
T Consensus 15 i~~~~Vvvy~k-~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~ 56 (109)
T 3ipz_A 15 VNSEKVVLFMK-GTRDFPMCGFSNTVVQILKN-------LNVPFEDVNIL 56 (109)
T ss_dssp HTSSSEEEEES-BCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred HccCCEEEEEe-cCCCCCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 34455555433 4 299999987666554 56665566654
No 462
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=59.55 E-value=19 Score=29.65 Aligned_cols=59 Identities=8% Similarity=0.148 Sum_probs=38.6
Q ss_pred CCCceEEE---eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPIIA---DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fplls---D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|--+. |.+.++++.||+. ++ ++++++++.+++-.-... ...|++.+++.+.|..+-
T Consensus 65 ~v~~~~vd~~~~~~~~l~~~~~v~--------~~----Pt~~~~~~g~~~~~g~~~-~~~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 65 ALYLAALDCAEETNSAVCRDFNIP--------GF----PTVRFFXAFTXNGSGAVF-PVAGADVQTLRERLIDAL 126 (244)
T ss_dssp TEEEEEEETTSTTTHHHHHHTTCC--------SS----SEEEEECTTCCSSSCEEC-CCTTCCHHHHHHHHHHHH
T ss_pred cEEEEEEeCCchhhHHHHHHcCCC--------cc----CEEEEEeCCCcCCCCeeE-ecCCCCHHHHHHHHHHHH
Confidence 45555554 6788999999985 44 489999874432110111 234689999999887653
No 463
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=59.54 E-value=12 Score=27.88 Aligned_cols=38 Identities=5% Similarity=-0.087 Sum_probs=22.2
Q ss_pred CCCeEEEEEEcC----CCCcccHHHHHHHHHHHHHHHhCCcE-EEEEeCCC
Q psy1172 179 PAFWGILFSHPS----DFTPVCTTELARVLQLIKEFEQRTCK-VIALSCDS 224 (276)
Q Consensus 179 ~gk~vvL~f~pa----~~cp~C~~el~~l~~~~~~~~~~gv~-Vv~VS~D~ 224 (276)
+..+|+|+.- + .|||+|.+-...|.+ .|+. +-.+.++.
T Consensus 18 ~~~~Vvvfsk-~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~ 60 (118)
T 2wem_A 18 KKDKVVVFLK-GTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVLD 60 (118)
T ss_dssp HHSSEEEEES-BCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESSS
T ss_pred ccCCEEEEEe-cCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcCC
Confidence 3455555433 4 399999976655553 5563 55556553
No 464
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=59.07 E-value=19 Score=24.94 Aligned_cols=53 Identities=15% Similarity=0.263 Sum_probs=34.5
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDS 87 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~ 87 (276)
++.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+.. .++.+++.+.|++
T Consensus 56 ~~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g----~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 56 GVKIAEVDCTAERNICSKYSVR--------GY----PTLLLF-RGGKKVSEHSG----GRDLDSLHRFVLS 109 (111)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEECS----CCSHHHHHHHHHH
T ss_pred ceEEEEEeccccHhHHHhcCCC--------cc----cEEEEE-eCCcEEEeccC----CcCHHHHHHHHHh
Confidence 3444333 35677999999974 44 355555 78987665542 3568888888864
No 465
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=58.11 E-value=5.6 Score=27.46 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=27.1
Q ss_pred cCCCCeEEEEEEcCCCCcccHH------HHHHHHHHHHHHHh
Q psy1172 177 SIPAFWGILFSHPSDFTPVCTT------ELARVLQLIKEFEQ 212 (276)
Q Consensus 177 ~~~gk~vvL~f~pa~~cp~C~~------el~~l~~~~~~~~~ 212 (276)
.++|+.++|--.|+.+|+.|-. ++..+.+...+|+.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 4789988888889999999964 45666666666643
No 466
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=58.11 E-value=14 Score=26.96 Aligned_cols=55 Identities=9% Similarity=0.025 Sum_probs=36.9
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
+.|--+ .|.+.++++.||+. ++ ++++++++.+++.... | .-.++.+++++.|+.+
T Consensus 71 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~~g~~~~~~~-~--~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 71 FVAARIDGEKYPDVIERMRVS--------GF----PTMRYYTRIDKQEPFE-Y--SGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEEEETTTCHHHHHHTTCC--------SS----SEEEEECSSCSSSCEE-C--CSCCCHHHHHHHHHHH
T ss_pred eEEEEEEccccHhHHHhcCCc--------cC----CEEEEEeCCCCCCceE-e--cCCccHHHHHHHHHhc
Confidence 444333 35677999999985 44 4888998777753211 2 2357899999988764
No 467
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=56.78 E-value=12 Score=31.14 Aligned_cols=43 Identities=12% Similarity=-0.076 Sum_probs=29.9
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHH-HHHHHHHHhC-CcEEEEEeC
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARV-LQLIKEFEQR-TCKVIALSC 222 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l-~~~~~~~~~~-gv~Vv~VS~ 222 (276)
.++.+|+.|+ .-.||+|.+-.+.+ .++.++|-+. .+.++-...
T Consensus 38 ~A~vtIvef~-Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 38 KAPILMIEYA-SLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 4567777788 89999999988764 5566677443 366665543
No 468
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=56.76 E-value=14 Score=30.04 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=29.8
Q ss_pred CCCCeEEEEEEcCCCCcccHHHHHHHH-HHHHHHHhC-CcEEEEEeC
Q psy1172 178 IPAFWGILFSHPSDFTPVCTTELARVL-QLIKEFEQR-TCKVIALSC 222 (276)
Q Consensus 178 ~~gk~vvL~f~pa~~cp~C~~el~~l~-~~~~~~~~~-gv~Vv~VS~ 222 (276)
-.++.+|+.|+ .-.||+|.+-.+.+. .+.++|.+. .+.++-...
T Consensus 27 ~~a~vtvvef~-D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 27 DDAPVTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TTCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCCEEEEEEE-CCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 34677788888 999999998777663 344455433 466666554
No 469
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=56.01 E-value=16 Score=29.43 Aligned_cols=73 Identities=12% Similarity=0.142 Sum_probs=45.0
Q ss_pred CCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEE---------EEEecCCC--CCCCHHHHHHHHH
Q psy1172 19 LPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLR---------LSFLYPAT--TGRNFDEILRVLD 86 (276)
Q Consensus 19 l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~---------~~~~~~~~--~~r~~~eilr~l~ 86 (276)
+.|- |=.|.+.+++..||+. ++ ++.+++-+.+... .-..|.+. .+|.++.+.+.|.
T Consensus 82 v~f~kvD~d~~~~la~~~~I~--------si----Ptl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~ 149 (178)
T 3ga4_A 82 NLFFTVDVNEVPQLVKDLKLQ--------NV----PHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLA 149 (178)
T ss_dssp EEEEEEETTTCHHHHHHTTCC--------SS----CEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHH
T ss_pred EEEEEEECccCHHHHHHcCCC--------CC----CEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHH
Confidence 4443 2345788999999985 33 5777776555443 12334555 4799999999996
Q ss_pred hhcccccCCCCcCCCCCC
Q psy1172 87 SLQLTDTKKVATPVDWKV 104 (276)
Q Consensus 87 ~lq~~~~~~~~~p~~w~~ 104 (276)
.- +.-.-++..|-||..
T Consensus 150 ~~-t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 150 KI-LNISITVPQAFNVQE 166 (178)
T ss_dssp HH-HTCCCCCCCSCC---
T ss_pred Hh-cCCCccccCCCChHH
Confidence 52 223335778888864
No 470
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=55.04 E-value=6.9 Score=29.68 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=28.1
Q ss_pred CeEEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHHHHHH
Q psy1172 181 FWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD-SVESHHDWIKAL 235 (276)
Q Consensus 181 k~vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~~~~~ 235 (276)
++ |+.|. .+|||+|.+-..-|.+.+. + ...+.++-|..+ +....++...+.
T Consensus 14 ~~-Vvvys-k~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~~ 65 (127)
T 3l4n_A 14 SP-IIIFS-KSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKLV 65 (127)
T ss_dssp CS-EEEEE-CTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHHH
T ss_pred CC-EEEEE-cCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHHH
Confidence 44 45555 7999999987766664210 0 123566666554 334445544433
No 471
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=52.72 E-value=1.9 Score=24.14 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=15.6
Q ss_pred CCcccHHHHHHHHHHHHHHH
Q psy1172 192 FTPVCTTELARVLQLIKEFE 211 (276)
Q Consensus 192 ~cp~C~~el~~l~~~~~~~~ 211 (276)
-||.|..++|+++.+..-|+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHH
Confidence 49999999998877665554
No 472
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=52.03 E-value=35 Score=33.10 Aligned_cols=36 Identities=3% Similarity=-0.009 Sum_probs=29.3
Q ss_pred ccccCCCCCcEEecC-CCCeEEecccCC--CCeEEEEEE
Q psy1172 153 RFAAALLPGCSLLGC-QASLVILECSIP--AFWGILFSH 188 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~-~G~~v~l~~~~~--gk~vvL~f~ 188 (276)
+.+|..+|++.+... +|..++|.+.+. |+++||.|-
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~ 517 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFA 517 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEE
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEec
Confidence 358999999999764 888888886674 689888875
No 473
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=51.18 E-value=4.5 Score=31.66 Aligned_cols=37 Identities=11% Similarity=0.258 Sum_probs=24.2
Q ss_pred cceEEEECCCCcEEEEEecCCC------CCCCHHHHHHHHHhh
Q psy1172 52 CRAVFIIDPAKKLRLSFLYPAT------TGRNFDEILRVLDSL 88 (276)
Q Consensus 52 ~R~tfiIdp~g~I~~~~~~~~~------~~r~~~eilr~l~~l 88 (276)
.++++++|++|+++.......+ .-.+++++|+.++..
T Consensus 101 ~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 101 VPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp SSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred CCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 3599999999998775543211 113577777777654
No 474
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=50.94 E-value=12 Score=27.59 Aligned_cols=42 Identities=5% Similarity=-0.095 Sum_probs=27.4
Q ss_pred EEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC----ChHHHHHHHHHH
Q psy1172 187 SHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD----SVESHHDWIKAL 235 (276)
Q Consensus 187 f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D----~~~~~~~~~~~~ 235 (276)
+|-..+||.|++-...|.+ +|+.+-.+.++ +.+.+++|.+..
T Consensus 4 iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~ 49 (114)
T 1rw1_A 4 LYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEH 49 (114)
T ss_dssp EEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhC
Confidence 4448899999987766654 56655555442 336677777655
No 475
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=49.98 E-value=44 Score=27.94 Aligned_cols=54 Identities=19% Similarity=0.349 Sum_probs=36.8
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhh
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSL 88 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~l 88 (276)
++.|--+ .|.+.++++.||+. |+ ++++++ ++|++...+... ++.+.+.+.|+.+
T Consensus 58 ~~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 112 (287)
T 3qou_A 58 QFILAKLDCDAEQMIAAQFGLR--------AI----PTVYLF-QNGQPVDGFQGP----QPEEAIRALLDXV 112 (287)
T ss_dssp SSEEEEEETTTCHHHHHTTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CeEEEEEeCccCHHHHHHcCCC--------CC----CeEEEE-ECCEEEEEeeCC----CCHHHHHHHHHHH
Confidence 4555444 36778999999985 44 377777 699987766633 3467777777654
No 476
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=49.80 E-value=7.5 Score=30.34 Aligned_cols=38 Identities=11% Similarity=0.225 Sum_probs=27.6
Q ss_pred cceEEEECCCCcEEEEEecCCC------CCCCHHHHHHHHHhhc
Q psy1172 52 CRAVFIIDPAKKLRLSFLYPAT------TGRNFDEILRVLDSLQ 89 (276)
Q Consensus 52 ~R~tfiIdp~g~I~~~~~~~~~------~~r~~~eilr~l~~lq 89 (276)
.++++++|++|+++........ ...+.+++++.|+.+.
T Consensus 104 ~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 104 IPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp SSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 4699999999998765543221 1368899999998764
No 477
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=49.79 E-value=15 Score=27.78 Aligned_cols=52 Identities=8% Similarity=0.043 Sum_probs=31.5
Q ss_pred EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCC----CCCC--CHHHHHHHHHhhc
Q psy1172 25 ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPA----TTGR--NFDEILRVLDSLQ 89 (276)
Q Consensus 25 sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~----~~~r--~~~eilr~l~~lq 89 (276)
.|.+.++++.||+. ++ +++++++ +|++........ -.|. +.+++++.|+++.
T Consensus 63 ~d~~~~~~~~~~i~--------~~----Pt~~~~~-~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 63 ITEVPDFNKMYELY--------DP----CTVMFFF-RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp TTTCCTTTTSSCSC--------SS----CEEEEEE-TTEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred cccCHHHHHHcCCC--------CC----CEEEEEE-CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 34566777777764 33 4777774 788766543211 1122 4788888888764
No 478
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=49.59 E-value=39 Score=25.40 Aligned_cols=48 Identities=4% Similarity=-0.090 Sum_probs=25.4
Q ss_pred EEEcCCCCcccH-HHHHHHHHHHHHHHhCCcEEEEEeCC-ChHHHHHHHHHH
Q psy1172 186 FSHPSDFTPVCT-TELARVLQLIKEFEQRTCKVIALSCD-SVESHHDWIKAL 235 (276)
Q Consensus 186 ~f~pa~~cp~C~-~el~~l~~~~~~~~~~gv~Vv~VS~D-~~~~~~~~~~~~ 235 (276)
..|-.+.||.|. .+-+. ..-.-++.+|+.+--+.++ +++.-+.+.+..
T Consensus 3 ~vYtt~~c~~c~~kk~c~--~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 3 RVYIASSSGSTAIKKKQQ--DVLGFLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEECTTCSCHHHHHHHH--HHHHHHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred EEEecCCCCCccchHHHH--HHHHHHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 344489999994 11111 1112245678777767765 444444445444
No 479
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=49.32 E-value=26 Score=25.17 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=26.4
Q ss_pred ccceEEEECCCCcEEEEEecCCCCCCCH-HHHHHHHHhhc
Q psy1172 51 TCRAVFIIDPAKKLRLSFLYPATTGRNF-DEILRVLDSLQ 89 (276)
Q Consensus 51 ~~R~tfiIdp~g~I~~~~~~~~~~~r~~-~eilr~l~~lq 89 (276)
.+...|+||++|+|..+.+-.-+....+ ++.+++++..+
T Consensus 41 ~V~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~~~ 80 (106)
T 2k9k_A 41 FVTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKKWK 80 (106)
T ss_dssp EEEEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHHCC
T ss_pred EEEEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHhCC
Confidence 5689999999999998877433322334 55667766543
No 480
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=49.12 E-value=28 Score=24.71 Aligned_cols=35 Identities=11% Similarity=0.036 Sum_probs=26.6
Q ss_pred CCCeEEecccCCCCeEEEEEEcCCCCcccHHHHHHHHH
Q psy1172 168 QASLVILECSIPAFWGILFSHPSDFTPVCTTELARVLQ 205 (276)
Q Consensus 168 ~G~~v~l~~~~~gk~vvL~f~pa~~cp~C~~el~~l~~ 205 (276)
+|..+.|- +++++.|.|-+- ++ |..|....-.|..
T Consensus 26 dGGdvelv-~v~~g~V~V~L~-Ga-C~gCpss~~TLk~ 60 (88)
T 1xhj_A 26 DGGDCTLV-DVEDGIVKLQLH-GA-CGTCPSSTITLKA 60 (88)
T ss_dssp HSCEEEEE-ECCSSEEEEEEE-SS-CCSSCHHHHHHHH
T ss_pred cCCeEEEE-EEECCEEEEEEe-ec-CCCCcchHHHHHH
Confidence 67788887 777877788777 77 8888877666553
No 481
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=48.92 E-value=24 Score=25.84 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=35.1
Q ss_pred CCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|-.+ .|.+.++++.||+. ++ .+++|+ ++|++ . .| .-.++.+++.+.|+.+-
T Consensus 70 v~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~-~--~~--~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 70 IAVAKIDATSASMLASKFDVS--------GY----PTIKIL-KKGQA-V--DY--DGSRTQEEIVAKVREVS 123 (140)
T ss_dssp CEEEEECTTTCHHHHHHTTCC--------SS----SEEEEE-ETTEE-E--EC--CSCCCHHHHHHHHHHHH
T ss_pred eEEEEEeCcccHHHHHHCCCC--------cc----CeEEEE-ECCcE-E--Ec--CCCCCHHHHHHHHHHhc
Confidence 554333 24567899999974 44 478888 68883 2 22 23467899999998764
No 482
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=46.95 E-value=43 Score=31.57 Aligned_cols=56 Identities=11% Similarity=0.138 Sum_probs=40.4
Q ss_pred CCCceEEE---eCccHHHHHhCCCCCCCCCCCCCCcccceEEEECC---CCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPIIA---DQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDP---AKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fplls---D~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp---~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.+.|--+. |.+.++++.||+. |+ ++++++++ +|++.... ..+++.+++.+.|+.+-
T Consensus 65 ~v~~~~VD~d~d~~~~l~~~~~V~--------~~----PTl~~f~~g~~~G~~~~~~----~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 65 ALNLAVLDCAEETNSAVCREFNIA--------GF----PTVRFFQAFTKNGSGATLP----GAGANVQTLRMRLIDAL 126 (519)
T ss_dssp TEEEEEEETTSGGGHHHHHHTTCC--------SB----SEEEEECTTCCSCCCEEEC----CSSCCHHHHHHHHHHHH
T ss_pred cEEEEEEECCccccHHHHHHcCCc--------cc----CEEEEEcCcccCCCceeEe----cCCCCHHHHHHHHHHHH
Confidence 46665554 5678999999985 44 58999998 77755443 23578999999887654
No 483
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=46.82 E-value=23 Score=26.23 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=28.0
Q ss_pred EEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC--C--ChHHHHHHHHHH
Q psy1172 186 FSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC--D--SVESHHDWIKAL 235 (276)
Q Consensus 186 ~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~--D--~~~~~~~~~~~~ 235 (276)
.+|-..+||.|++....|. ++|+.+-.+.+ + +.+.+++|.+..
T Consensus 3 ~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~el~~~l~~~ 49 (120)
T 3l78_A 3 TLFLSPSCTSCRKARAWLN-------RHDVVFQEHNIMTSPLSRDELLKILSYT 49 (120)
T ss_dssp EEEECSSCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHHC
T ss_pred EEEeCCCCHHHHHHHHHHH-------HcCCCeEEEecccCCCcHHHHHHHHhhc
Confidence 4454889999998876665 46665555544 3 346666776654
No 484
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.15 E-value=53 Score=26.21 Aligned_cols=47 Identities=6% Similarity=0.012 Sum_probs=32.6
Q ss_pred CCCeEEEEEEcCCCCcccHHHHHHH---HHHHHHHHhCCcEEEEEeCCChHH
Q psy1172 179 PAFWGILFSHPSDFTPVCTTELARV---LQLIKEFEQRTCKVIALSCDSVES 227 (276)
Q Consensus 179 ~gk~vvL~f~pa~~cp~C~~el~~l---~~~~~~~~~~gv~Vv~VS~D~~~~ 227 (276)
.+|+++|+++ ..||+.|..-...+ .++.+-+ ..++.+.+.++++.+.
T Consensus 54 e~K~LlVyLh-s~~~~~~~~f~~~~L~~~~V~~~l-~~nfV~w~~dv~~~e~ 103 (178)
T 2ec4_A 54 DRKLLAIYLH-HDESVLTNVFCSQMLCAESIVSYL-SQNFITWAWDLTKDSN 103 (178)
T ss_dssp TCCEEEEEEE-CSSCSHHHHHHHHTTTCHHHHHHH-HHTEEEEEEECCSHHH
T ss_pred hCcEEEEEEe-CCCCccHHHHHHHhcCCHHHHHHH-HcCEEEEEEeCCCchh
Confidence 5789999999 99999988654322 1122223 3478888999988763
No 485
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=45.17 E-value=52 Score=28.06 Aligned_cols=83 Identities=10% Similarity=-0.047 Sum_probs=47.6
Q ss_pred CCCCCcEEecCCCCeEEecccC-----C-CCeEEEEEEcCCCCcccHHHHHHHHHHH-H---------HHHhCCcEEEEE
Q psy1172 157 ALLPGCSLLGCQASLVILECSI-----P-AFWGILFSHPSDFTPVCTTELARVLQLI-K---------EFEQRTCKVIAL 220 (276)
Q Consensus 157 ~~aPdF~L~~~~G~~v~l~~~~-----~-gk~vvL~f~pa~~cp~C~~el~~l~~~~-~---------~~~~~gv~Vv~V 220 (276)
+.+|-|+++|.+|..+.....- + ++.|.++|+ +..+...+-+.. . ++ ..+++|..|
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~-~~~~kV~~v 83 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEI-VKSLQVTAV 83 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHH-HTTCEEEEE
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhh-ccCceEEEe
Confidence 4579999999999977655221 1 355555555 344444333322 2 22 346899999
Q ss_pred eCCChHHHHHHHHHHHhcccCCeeEEEeeCC
Q psy1172 221 SCDSVESHHDWIKALVRDCILGLLINLSVDD 251 (276)
Q Consensus 221 S~D~~~~~~~~~~~~~~~~~~~~~~~~l~D~ 251 (276)
|.+....+. .+. +....++.|.|+-|.
T Consensus 84 sL~~vyql~--~~~--~~k~~~l~F~fvP~~ 110 (252)
T 4ev1_A 84 PLGVIYQQL--QQT--KKDPNRLLFAFKPVD 110 (252)
T ss_dssp EHHHHHHHH--HHT--TTCTTCEEEEEECCH
T ss_pred eHHHHHHHH--Hhh--ccCCcCceEEEcCCH
Confidence 988654332 111 111225778888663
No 486
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=44.36 E-value=33 Score=26.38 Aligned_cols=56 Identities=13% Similarity=0.234 Sum_probs=38.5
Q ss_pred CCCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 17 GKLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 17 ~~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
.++.|--+ .|.+.++|..||+. ++ ++.++. .||++........+ -+++.+.|+++.
T Consensus 66 ~~v~~~KVdvDe~~~la~~ygV~--------si----PTlilF-kdG~~v~~~vG~~~----k~~l~~~l~~~l 122 (137)
T 2qsi_A 66 GRLVAAEVAAEAERGLMARFGVA--------VC----PSLAVV-QPERTLGVIAKIQD----WSSYLAQIGAML 122 (137)
T ss_dssp TTEEEEEECGGGHHHHHHHHTCC--------SS----SEEEEE-ECCEEEEEEESCCC----HHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHcCCc--------cC----CEEEEE-ECCEEEEEEeCCCC----HHHHHHHHHHHh
Confidence 34555333 46788999999986 44 366666 79999988875443 667777777543
No 487
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=43.66 E-value=27 Score=27.00 Aligned_cols=54 Identities=13% Similarity=0.226 Sum_probs=37.9
Q ss_pred CCceE-EEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 19 LPYPI-IADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 19 l~fpl-lsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
+.|-- =.|.+.++|..||+. ++ .+.++. .||++....... ++-+++.+.|+++-
T Consensus 70 v~~~KVdvDe~~~lA~~ygV~--------sI----PTlilF-k~G~~v~~~~G~----~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 70 WQVAIADLEQSEAIGDRFGAF--------RF----PATLVF-TGGNYRGVLNGI----HPWAELINLMRGLV 124 (140)
T ss_dssp CEEEECCHHHHHHHHHHHTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHHcCCc--------cC----CEEEEE-ECCEEEEEEecC----CCHHHHHHHHHHHh
Confidence 55532 246788999999986 45 366555 799998888743 34678888887654
No 488
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=42.90 E-value=16 Score=25.74 Aligned_cols=55 Identities=20% Similarity=0.335 Sum_probs=34.8
Q ss_pred CCCceEE-EeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEE--EEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYPII-ADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLR--LSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fpll-sD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~--~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|--+ .|.+.++++.||+. ++ ++++++ ++|++. ..+. -.++.+++.+.|+.+.
T Consensus 59 ~v~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~~~----g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 59 EIRLAKVDATEESDLAQQYGVR--------GY----PTIKFF-RNGDTASPKEYT----AGREADDIVNWLKKRT 116 (120)
T ss_dssp CCBCEEEETTTCCSSHHHHTCC--------SS----SEEEEE-ESSCSSSCEECC----CCSSHHHHHHHHHTTS
T ss_pred cEEEEEEcCCCCHHHHHHCCCC--------cc----cEEEEE-eCCCcCCccccc----CccCHHHHHHHHHhcc
Confidence 3554333 23456899999974 44 478888 577754 3222 2457899999987653
No 489
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=42.72 E-value=32 Score=25.57 Aligned_cols=44 Identities=14% Similarity=0.178 Sum_probs=29.5
Q ss_pred EEEEcCCCCcccHHHHHHHHHHHHHHHhCCc--EEEEEeCC--ChHHHHHHHHHH
Q psy1172 185 LFSHPSDFTPVCTTELARVLQLIKEFEQRTC--KVIALSCD--SVESHHDWIKAL 235 (276)
Q Consensus 185 L~f~pa~~cp~C~~el~~l~~~~~~~~~~gv--~Vv~VS~D--~~~~~~~~~~~~ 235 (276)
+.+|-..+|+.|++....|.+ +|+ +++-|.-+ +.+.+++|.+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecccCcCCHHHHHHHHHHc
Confidence 344548899999988777663 565 45545434 456778888877
No 490
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=42.20 E-value=37 Score=24.99 Aligned_cols=43 Identities=5% Similarity=-0.053 Sum_probs=26.7
Q ss_pred EEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeC--C--ChHHHHHHHHHH
Q psy1172 186 FSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSC--D--SVESHHDWIKAL 235 (276)
Q Consensus 186 ~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~--D--~~~~~~~~~~~~ 235 (276)
.+|-..+|+.|++-...|.+ +|+.+-.+.+ + +.+..++|.++.
T Consensus 8 ~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~ 54 (120)
T 2kok_A 8 TIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTV 54 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHS
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHc
Confidence 34448899999988777664 4554444433 3 335666676655
No 491
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=41.91 E-value=39 Score=25.07 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=28.9
Q ss_pred EEEEcCCCCcccHHHHHHHHHHHHHHHhCCcE--EEEEeCC--ChHHHHHHHHHH
Q psy1172 185 LFSHPSDFTPVCTTELARVLQLIKEFEQRTCK--VIALSCD--SVESHHDWIKAL 235 (276)
Q Consensus 185 L~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~--Vv~VS~D--~~~~~~~~~~~~ 235 (276)
+.+|-..+|+.|++....|.+ +|+. ++-|.-+ +.+.+++|.+..
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~ 52 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAASLIRNWLENS 52 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHHHHHHHHHHS
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHHHHHHHHHHc
Confidence 445558899999988777664 4554 4444434 356777777776
No 492
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=41.89 E-value=30 Score=24.02 Aligned_cols=38 Identities=13% Similarity=0.281 Sum_probs=24.4
Q ss_pred ccceEEEECCCCcEEEEEecCCCCCCCHH-HHHHHHHhh
Q psy1172 51 TCRAVFIIDPAKKLRLSFLYPATTGRNFD-EILRVLDSL 88 (276)
Q Consensus 51 ~~R~tfiIdp~g~I~~~~~~~~~~~r~~~-eilr~l~~l 88 (276)
.+...|.||+||+|..+.+-.-+....++ +.+++++..
T Consensus 26 ~V~v~~~i~~~G~v~~~~v~~ssg~~~ld~aa~~av~~~ 64 (90)
T 1u07_A 26 QVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRW 64 (90)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEESSSSSHHHHHHHHTTC
T ss_pred EEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHhC
Confidence 46799999999999988763222222344 455555443
No 493
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=40.33 E-value=26 Score=24.94 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=27.0
Q ss_pred cHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHH
Q psy1172 29 RSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLD 86 (276)
Q Consensus 29 ~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~ 86 (276)
.++++.||+. |+ +++++++ +|++...+.. .++.+++.+.|+
T Consensus 77 ~~~~~~~~i~--------~~----Pt~~~~~-~G~~~~~~~G----~~~~~~l~~~l~ 117 (118)
T 1zma_A 77 QAFRSRYGIP--------TV----PGFVHIT-DGQINVRCDS----SMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHTCC--------SS----CEEEEEE-TTEEEEECCT----TCCHHHHHHHHT
T ss_pred HHHHHHcCCC--------CC----CeEEEEE-CCEEEEEecC----CCCHHHHHHHhh
Confidence 4788999974 44 4777774 8887654332 345777777664
No 494
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=39.87 E-value=47 Score=26.88 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=36.9
Q ss_pred CCCce-EEEeCccHHHHHhCCCCCCCCCCCCCCcccceEEEECCCCcEEEEEecCCCCCCCHHHHHHHHHhhc
Q psy1172 18 KLPYP-IIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89 (276)
Q Consensus 18 ~l~fp-llsD~~~~va~~yG~~~~~~~~~~g~~~~~R~tfiIdp~g~I~~~~~~~~~~~r~~~eilr~l~~lq 89 (276)
++.|- +=.|.+..+++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+.
T Consensus 62 ~v~~~~vd~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 62 KLTVAKLNIDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDANL 117 (222)
T ss_dssp TCEEEEEETTTCTTTGGGGTCC--------SB----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHS
T ss_pred CcEEEEEECCCCHHHHHHcCCC--------cC----CEEEEE-ECCeEEEEeccc----cChHHHHHHHHhhc
Confidence 35543 2335677899999874 44 356666 589988766533 46888888888764
No 495
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=38.10 E-value=49 Score=24.72 Aligned_cols=40 Identities=8% Similarity=0.072 Sum_probs=24.7
Q ss_pred EEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC--C--hHHHHHHHH
Q psy1172 187 SHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD--S--VESHHDWIK 233 (276)
Q Consensus 187 f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D--~--~~~~~~~~~ 233 (276)
+|-..+||.|++-...|.+ +|+.+-.+.++ + .+.+++|.+
T Consensus 5 lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 5 LYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp EEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHH
Confidence 3448999999987766654 56655555553 2 245555544
No 496
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=35.76 E-value=62 Score=31.04 Aligned_cols=52 Identities=10% Similarity=0.022 Sum_probs=35.7
Q ss_pred ccccCCCCCcEEecC-CCCeEEecccCC--CCeEEEEEEcCCCCcccH-HHHHHHHH
Q psy1172 153 RFAAALLPGCSLLGC-QASLVILECSIP--AFWGILFSHPSDFTPVCT-TELARVLQ 205 (276)
Q Consensus 153 ~~~G~~aPdF~L~~~-~G~~v~l~~~~~--gk~vvL~f~pa~~cp~C~-~el~~l~~ 205 (276)
+.+|..+|++.+... +|+.++|.+.+. |+++||.|- +.-.+.+. ..+..+.+
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~ 522 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPESGLLALCR 522 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSHHHHHHH
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhHHHHHHHHH
Confidence 358999999999764 888889886674 689888874 44344444 33334433
No 497
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=35.72 E-value=68 Score=27.60 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=25.4
Q ss_pred EEEEEEcCCCCcccHHHHHHHHHHHHHHHhCCcEEEEEeCC
Q psy1172 183 GILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCD 223 (276)
Q Consensus 183 vvL~f~pa~~cp~C~~el~~l~~~~~~~~~~gv~Vv~VS~D 223 (276)
+.|..|-..+||.|..--..|.++..+ .++..+.+.++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 445545599999999887777776554 45544555543
No 498
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=34.60 E-value=31 Score=29.02 Aligned_cols=38 Identities=13% Similarity=0.281 Sum_probs=25.4
Q ss_pred ccceEEEECCCCcEEEEEecCCCCCCCHH-HHHHHHHhh
Q psy1172 51 TCRAVFIIDPAKKLRLSFLYPATTGRNFD-EILRVLDSL 88 (276)
Q Consensus 51 ~~R~tfiIdp~g~I~~~~~~~~~~~r~~~-eilr~l~~l 88 (276)
.++..|+||+||+|..+.+-.-+..+.+| +.+++++.+
T Consensus 165 ~V~V~f~Id~dG~V~~v~V~~SSG~~~LD~aAl~AVr~~ 203 (229)
T 2grx_C 165 QVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRW 203 (229)
T ss_dssp EECEEEECCTTSCCEEEEECCCSSSTTSHHHHHHHTTSC
T ss_pred EEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHh
Confidence 57899999999999998884332223344 456665543
No 499
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=32.74 E-value=78 Score=27.75 Aligned_cols=43 Identities=16% Similarity=0.248 Sum_probs=30.7
Q ss_pred cceEEEECCCCcEEEEEecCCC--------------CCCCHHHHHHHHHhhcccccC
Q psy1172 52 CRAVFIIDPAKKLRLSFLYPAT--------------TGRNFDEILRVLDSLQLTDTK 94 (276)
Q Consensus 52 ~R~tfiIdp~g~I~~~~~~~~~--------------~~r~~~eilr~l~~lq~~~~~ 94 (276)
.|.=|++|+||++.....+|.. .|-++.+++..|-.|.+..+|
T Consensus 296 ~~VDf~~~~dg~~~vlEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~li~~aler~~ 352 (357)
T 4fu0_A 296 SRVDMFYTPSGEIVFNEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKLIGLYVELEH 352 (357)
T ss_dssp EEEEEEECTTCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHTTC----
T ss_pred EEEEEEEeCCCCEEEEEEeCCCCCCcccHHHHHHHHhCcCHHHHHHHHHHHHhcccc
Confidence 5889999999999999998753 356778888877655544443
No 500
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=32.21 E-value=36 Score=24.96 Aligned_cols=22 Identities=23% Similarity=0.246 Sum_probs=18.1
Q ss_pred cceEEEECCCCcEEEEEecCCC
Q psy1172 52 CRAVFIIDPAKKLRLSFLYPAT 73 (276)
Q Consensus 52 ~R~tfiIdp~g~I~~~~~~~~~ 73 (276)
.|..|+.||+|.+..+..+|..
T Consensus 133 g~~~~~~DPdG~~iel~~~~~~ 154 (156)
T 3kol_A 133 GRGVYFYDPDGFMIEIRCDPEA 154 (156)
T ss_dssp CEEEEEECTTSCEEEEEECCC-
T ss_pred ccEEEEECCCCCEEEEEecCCC
Confidence 4789999999999988887654
Done!