RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1172
(276 letters)
>d1xcca_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Plasmodium yoelii
yoelii [TaxId: 73239]}
Length = 219
Score = 92.2 bits (228), Expect = 3e-23
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
K PI+ D+ R LA +L ++D EKD G+PLTCR +F I P KK++ + LYPATT
Sbjct: 90 KLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATT 149
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSEGK 122
GRN EILRVL SLQLT T VATPV+W G + V P L +D E
Sbjct: 150 GRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCCVIPTL--QDDEIS 195
Score = 50.6 bits (120), Expect = 3e-08
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIK 233
W ILFSHP+DFTPVCTTELA + ++ ++F + CK+I SC+S ESH WI+
Sbjct: 32 WAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIE 83
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 220
Score = 91.8 bits (227), Expect = 6e-23
Identities = 67/109 (61%), Positives = 82/109 (75%)
Query: 12 CGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP 71
E KLP+PII D++R LA+ LGMLDP EKD KGMP+T R VF+ P KKL+LS LYP
Sbjct: 87 SEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYP 146
Query: 72 ATTGRNFDEILRVLDSLQLTDTKKVATPVDWKVGMEIEVRPGLVSKDSE 120
ATTGRNFDEILRV+ SLQLT K+VATPVDWK G + V P + ++++
Sbjct: 147 ATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAK 195
Score = 49.0 bits (116), Expect = 1e-07
Identities = 36/69 (52%), Positives = 40/69 (57%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
WGILFSHP DFTPVCTTEL R +L EF +R K+IALS DSVE H W K +
Sbjct: 29 WGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSE 88
Query: 242 GLLINLSVD 250
L
Sbjct: 89 EPTEKLPFP 97
>d1uula_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Trypanosoma cruzi [TaxId: 5693]}
Length = 194
Score = 87.1 bits (215), Expect = 2e-21
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR 76
G++ PI+AD+ + + G+L + + R +FIIDP + LR + GR
Sbjct: 95 GQMNIPILADKTKCIMKSYGVLKEEDG------VAYRGLFIIDPKQNLRQITVNDLPVGR 148
Query: 77 NFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
+ DE LR++ + Q + P +WK G +
Sbjct: 149 DVDEALRLVKAFQFVEKHGEVCPANWKPGDK 179
Score = 46.3 bits (109), Expect = 8e-07
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
W +LF +P DFT VC TE+ + +KEF C+V+A S DS SH W + L
Sbjct: 35 WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGL 94
Query: 242 GLLINLSVDD-----------FKEVEGRSRR 261
G + + D KE +G + R
Sbjct: 95 GQMNIPILADKTKCIMKSYGVLKEEDGVAYR 125
>d1qmva_ c.47.1.10 (A:) Thioredoxin peroxidase 2 (thioredoxin
peroxidase B, 2-cys peroxiredoxin) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 197
Score = 86.0 bits (212), Expect = 6e-21
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 15 GDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATT 74
G G L P++AD R L+ G+L E + R +FIID LR +
Sbjct: 94 GLGPLNIPLLADVTRRLSEDYGVLKTDEG------IAYRGLFIIDGKGVLRQITVNDLPV 147
Query: 75 GRNFDEILRVLDSLQLTDTKKVATPVDWKVGME 107
GR+ DE LR++ + Q TD P WK G +
Sbjct: 148 GRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSD 180
Score = 45.1 bits (106), Expect = 2e-06
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
+ +LF +P DFT VC TE+ ++F + C+V+ +S DS +H WI ++ L
Sbjct: 36 YVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGL 95
Query: 242 G 242
G
Sbjct: 96 G 96
>d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA
{Helicobacter pylori [TaxId: 210]}
Length = 170
Score = 75.3 bits (184), Expect = 2e-17
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR 76
G++ +P++AD +S++ +L + R F+ID K+R + + GR
Sbjct: 95 GQVSFPMVADITKSISRDYDVLFE-------EAIALRGAFLIDKNMKVRHAVINDLPLGR 147
Query: 77 NFDEILRVLDSLQLTDTKKVATP 99
N DE+LR++D+L + P
Sbjct: 148 NADEMLRMVDALLHFEEHGEVCP 170
Score = 43.7 bits (102), Expect = 4e-06
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
ILF P DFT VC TE+ + +K+F ++ VI +S DS + H W V +
Sbjct: 35 GVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGI 94
Query: 242 GLLINLSVDDFK 253
G + V D
Sbjct: 95 GQVSFPMVADIT 106
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId:
56636]}
Length = 237
Score = 76.8 bits (188), Expect = 3e-17
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 1 MFLQDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDP 60
+F ++P+PIIAD ++A +LG+L T R VFI+D
Sbjct: 74 VFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES-----ATHTVRGVFIVDA 128
Query: 61 AKKLRLSFLYPATTGRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
+R YP GR DEILR++ +L+L D+ K A P DW
Sbjct: 129 RGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNN 173
Score = 54.1 bits (129), Expect = 2e-09
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
W +LFSHP+DFTPVCTTE + ++F++ +I LS DSV SH W + + R +
Sbjct: 31 WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV 90
Query: 242 GLLINLSVDDFKEV 255
+ + D V
Sbjct: 91 RIPFPIIADPQGTV 104
>d2h01a1 c.47.1.10 (A:2-171) Thioredoxin peroxidase 2 (thioredoxin
peroxidase B, 2-cys peroxiredoxin) {Plasmodium yoelii
[TaxId: 5861]}
Length = 170
Score = 74.1 bits (181), Expect = 7e-17
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 14 EGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPAT 73
G G + + +I+D +S+A +L + RA +ID ++ +
Sbjct: 86 GGIGNIKHTLISDISKSIARSYDVLFN-------ESVALRAFVLIDKQGVVQHLLVNNLA 138
Query: 74 TGRNFDEILRVLDSLQLTDTKKVATPVDWKVG 105
GR+ DEILR++D+LQ + P +W+ G
Sbjct: 139 LGRSVDEILRLIDALQHHEKYGDVCPANWQKG 170
Score = 45.3 bits (106), Expect = 1e-06
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
+ +L+ +P DFT VC +E+ + + + F++R +++ S DS +H W
Sbjct: 29 YVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAW 78
>d1zyea1 c.47.1.10 (A:6-163) Peroxiredoxin-3 (AOP-1, SP-22) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 158
Score = 71.8 bits (175), Expect = 4e-16
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR 76
G + +++D + ++ G+ +G L R +FIIDP ++ + GR
Sbjct: 88 GHMNIALLSDLTKQISRDYGV------LLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGR 141
Query: 77 NFDEILRVLDSLQLTD 92
+ +E LR++ + Q +
Sbjct: 142 SVEETLRLVKAFQFVE 157
Score = 55.2 bits (132), Expect = 3e-10
Identities = 27/95 (28%), Positives = 41/95 (43%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
+ +LF +P DFT VC TE+ EF C+V+A+S DS SH WI ++ L
Sbjct: 28 YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGL 87
Query: 242 GLLINLSVDDFKEVEGRSRRFQESLNTYGYLGTYV 276
G + + D + R G ++
Sbjct: 88 GHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFI 122
>d1e2ya_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Crithidia fasciculata [TaxId:
5656]}
Length = 167
Score = 71.5 bits (174), Expect = 6e-16
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 20 PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFD 79
P++AD+ +++A G+LD + R VFIIDP KLR + GRN +
Sbjct: 98 AIPMLADKTKAIARAYGVLDE------DSGVAYRGVFIIDPNGKLRQIIINDMPIGRNVE 151
Query: 80 EILRVLDSLQLTD 92
E++R++++LQ +
Sbjct: 152 EVIRLVEALQFVE 164
>d1we0a1 c.47.1.10 (A:1-166) Alkyl hydroperoxide reductase AhpC
{Amphibacillus xylanus [TaxId: 1449]}
Length = 166
Score = 66.5 bits (161), Expect = 4e-14
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 20 PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFD 79
Y +I D ++++ Q +L+ L R FIIDP ++ + GR+
Sbjct: 93 EYIMIGDPSQTISRQFDVLNE------ETGLADRGTFIIDPDGVIQAIEINADGIGRDAS 146
Query: 80 EILRVLDSLQLTDTK 94
++ + + Q
Sbjct: 147 TLINKVKAAQYVREN 161
Score = 41.4 bits (96), Expect = 3e-05
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
W I+ +P+DF+ VC TEL V + E ++ +V ++S D+ H W
Sbjct: 33 WSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAW 82
>d1n8ja_ c.47.1.10 (A:) Alkyl hydroperoxide reductase AhpC
{Salmonella typhimurium [TaxId: 90371]}
Length = 186
Score = 63.3 bits (153), Expect = 8e-13
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 20 PYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGRNFD 79
Y +I D +L + E RA F++DP ++ + GR+
Sbjct: 92 KYAMIGDPTGALTRNFDNMREDEGL------ADRATFVVDPQGIIQAIEVTAEGIGRDAS 145
Query: 80 EILRVLDSLQLTDT-KKVATPVDWKVGMEIEVRPGLVSKDSEGKL 123
++LR + + Q P WK G + P L D GK+
Sbjct: 146 DLLRKIKAAQYVAAHPGEVCPAKWKEGEAT-LAPSL---DLVGKI 186
Score = 46.0 bits (108), Expect = 1e-06
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDW 231
W + F +P+DFT V TEL V +E ++ V ++S D+ +H W
Sbjct: 32 WSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAW 81
>d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 169
Score = 59.7 bits (143), Expect = 1e-11
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR 76
LP+P+++D R L+ G+L+ G+ R FI+DP +++ + GR
Sbjct: 103 KTLPFPMLSDIKRELSQAAGVLNA-----DGVA--DRVTFIVDPNNEIQFVSATAGSVGR 155
Query: 77 NFDEILRVLDSLQ 89
N DE+LRVLD+LQ
Sbjct: 156 NVDEVLRVLDALQ 168
Score = 27.0 bits (58), Expect = 2.2
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKALVRDCIL 241
W ++F P DFT VC TE+A +L EFE R +++ +S DS +H W L
Sbjct: 46 WRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTL 105
>d2cx4a1 c.47.1.10 (A:4-163) Bacterioferritin comigratory protein
{Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 160
Score = 47.8 bits (112), Expect = 2e-07
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 17 GKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYPATTGR 76
+L + +++D +R + + K K + RAVFI+ P + ++
Sbjct: 85 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAK--RAVFIVKPDGTVAYKWVTDNPLNE 142
Query: 77 -NFDEILRVLDSLQ 89
++DE++R + +
Sbjct: 143 PDYDEVVREANKIA 156
>d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 163
Score = 47.2 bits (111), Expect = 2e-07
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 46 KGMPLTCRAVFIIDPAKKLRLSFLYP-ATTGRNFDEILRVLDSL 88
L RAVF++D +R + NF+ + +L
Sbjct: 120 NEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163
>d1hd2a_ c.47.1.10 (A:) Peroxiredoxin 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 161
Score = 44.9 bits (105), Expect = 1e-06
Identities = 8/85 (9%), Positives = 23/85 (27%)
Query: 4 QDIQSYSSCGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKK 63
+ + ++AD + + +L S + ++
Sbjct: 77 DAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGI 136
Query: 64 LRLSFLYPATTGRNFDEILRVLDSL 88
++ + P TG ++ L
Sbjct: 137 VKALNVEPDGTGLTCSLAPNIISQL 161
>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 153
Score = 44.7 bits (104), Expect = 1e-06
Identities = 7/38 (18%), Positives = 15/38 (39%)
Query: 52 CRAVFIIDPAKKLRLSFLYPATTGRNFDEILRVLDSLQ 89
R F++D + +R + + R+ L +L
Sbjct: 115 NRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 152
>d1q98a_ c.47.1.10 (A:) Thiol peroxidase Tpx {Haemophilus influenzae
[TaxId: 727]}
Length = 164
Score = 44.4 bits (104), Expect = 2e-06
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 12 CGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP 71
CG + + ++ +L QLG+ + LT RAV ++D + S L
Sbjct: 92 CGAEGIENAKTVSTFRNHALHSQLGVD---IQTGPLAGLTSRAVIVLDEQNNVLHSQLVE 148
Query: 72 ATTGR-NFDEILRVL 85
N++ L VL
Sbjct: 149 EIKEEPNYEAALAVL 163
>d1s0ua1 b.43.3.1 (A:230-347) Initiation factor eIF2 gamma subunit,
domain II {Archaeon Methanococcus jannaschii [TaxId:
2190]}
Length = 118
Score = 39.6 bits (92), Expect = 6e-05
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 103 KVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
KVG EIE+RPG+ + K KP+ ++IVSL A L+ A PGGLI
Sbjct: 42 KVGDEIEIRPGIKVTE-GNKTFWKPLTTKIVSLAAGNTILRKAHPGGLI 89
>d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli
[TaxId: 562]}
Length = 164
Score = 40.2 bits (93), Expect = 7e-05
Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 12 CGEGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP 71
CG + ++ G+ D L RAV +ID + S L
Sbjct: 94 CGAEGLNNVITLSTFRNAEFLQAYGVAI---ADGPLKGLAARAVVVIDENDNVIFSQLVD 150
Query: 72 -ATTGRNFDEILRV 84
TT +++ L V
Sbjct: 151 EITTEPDYEAALAV 164
>d2qn6a1 b.43.3.1 (A:207-320) Initiation factor eIF2 gamma subunit,
domain II {Sulfolobus solfataricus [TaxId: 2287]}
Length = 114
Score = 38.1 bits (88), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 103 KVGMEIEVRPGLVSKDSEGKLTCKPIFSRIVSLFAEQNELQFAVPGGLI 151
KV EI+V PGL + +GK++ +PIF++I S+ E + A PGGL+
Sbjct: 42 KVDQEIKVLPGLRVE-KQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLV 89
>d1xvqa_ c.47.1.10 (A:) Thiol peroxidase Tpx {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 166
Score = 38.7 bits (89), Expect = 2e-04
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 14 EGDGKLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAKKLRLSFLYP-A 72
+G + S G+ + RA+ +I + + L P
Sbjct: 93 GAEGTENVMPASAFRDSFGEDYGVTIADGPMAGL---LARAIVVIGADGNVAYTELVPEI 149
Query: 73 TTGRNFDEILRVLDSL 88
N++ L L +
Sbjct: 150 AQEPNYEAALAALGAT 165
>d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 156
Score = 32.3 bits (72), Expect = 0.028
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 18 KLPYPIIADQDRSLAVQLGMLDPVEKDSKGMPLTCRAVFIIDPAK-KLRLSFLYPA-TTG 75
LPY +++D R LG + + R+ FI K K + + P +
Sbjct: 88 NLPYHLLSDPKREFIGLLGA------KKTPLSGSIRSHFIFVDGKLKFKRVKISPEVSVN 141
Query: 76 RNFDEILRVLDSLQ 89
E+L V + +
Sbjct: 142 DAKKEVLEVAEKFK 155
>d1xiya1 c.47.1.10 (A:2-180) 1-Cys peroxiredoxin {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 179
Score = 28.9 bits (64), Expect = 0.49
Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 182 WGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKV---IALSCDSVESHHDWIKA 234
+L S P FTP C+T++ + ++ + ++ + + W K+
Sbjct: 44 KILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKS 99
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 101
Score = 26.5 bits (57), Expect = 1.6
Identities = 10/60 (16%), Positives = 18/60 (30%)
Query: 176 CSIPAFWGILFSHPSDFTPVCTTELARVLQLIKEFEQRTCKVIALSCDSVESHHDWIKAL 235
S G+L + R+ + ++ DS E DW+K +
Sbjct: 35 TSSDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKI 94
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 26.5 bits (57), Expect = 1.6
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 215 CKVIALSCDSVESHHDWIKALVR 237
+ + L+C++ E W + +R
Sbjct: 83 YRQLELACETQEEVDSWKASFLR 105
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus
thermophilus [TaxId: 274]}
Length = 56
Score = 25.2 bits (55), Expect = 1.8
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 251 DFKEVEGRSRRFQESLNTYG 270
+++ +G FQ YG
Sbjct: 3 SYRQPDGLPGGFQTRHAVYG 22
>d1znpa1 b.82.1.16 (A:4-143) Hypothetical protein Atu3615
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 140
Score = 25.5 bits (56), Expect = 4.4
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 131 RIVSLFAEQNELQFAVPGGLIDRFAAALLPGCSLLGC 167
+ E Q VP +A L +L+GC
Sbjct: 85 TLGPAILEGERPQVIVPANCW--QSAESLGDFTLVGC 119
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 25.3 bits (54), Expect = 4.8
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 216 KVIALSCDSVESHHDWIKAL 235
+ L+ D++E W++AL
Sbjct: 83 RTYVLAADTLEDLRGWLRAL 102
>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020)
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 25.5 bits (56), Expect = 6.8
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 8/48 (16%)
Query: 196 CTTELARVLQLIKEFEQR--------TCKVIALSCDSVESHHDWIKAL 235
++L R + + E +R T I+L C + W +
Sbjct: 17 IASDLPRFIHALDELSRRLGLNITPLTADHISLRCHQNATAERWRRGF 64
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 24.4 bits (52), Expect = 7.7
Identities = 3/20 (15%), Positives = 7/20 (35%)
Query: 216 KVIALSCDSVESHHDWIKAL 235
+ + S DW+ +
Sbjct: 79 RTYEFTATSPAEARDWVDQI 98
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.423
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,038,545
Number of extensions: 47318
Number of successful extensions: 158
Number of sequences better than 10.0: 1
Number of HSP's gapped: 154
Number of HSP's successfully gapped: 44
Length of query: 276
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 192
Effective length of database: 1,254,276
Effective search space: 240820992
Effective search space used: 240820992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.4 bits)