RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11724
         (355 letters)



>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter
           lyticus, strain m497-1 [TaxId: 224]}
          Length = 263

 Score = 27.7 bits (60), Expect = 2.4
 Identities = 8/61 (13%), Positives = 14/61 (22%), Gaps = 11/61 (18%)

Query: 220 EDNVNILSGSDWVVHLDEETLLTENSIRGVLNFVLDGKHHFGQGLITYANEEVVNWVTTL 279
             +V    G               + IR V  +   G       L+     +   +  T 
Sbjct: 7   NIDVVCPEGDGR-----------RDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTA 55

Query: 280 A 280
            
Sbjct: 56  H 56


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.140    0.438 

Gapped
Lambda     K      H
   0.267   0.0527    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,364,844
Number of extensions: 64417
Number of successful extensions: 127
Number of sequences better than 10.0: 1
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 2
Length of query: 355
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 269
Effective length of database: 1,226,816
Effective search space: 330013504
Effective search space used: 330013504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (24.7 bits)