BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11725
(347 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GP71|YELL_DROMD Protein yellow OS=Drosophila madeirensis GN=y PE=3 SV=1
Length = 568
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 134/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++LTP +DG++ L F P+AS
Sbjct: 222 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRSDGYRTLYFSPLAS 279
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +G+ FNLID+NAVG
Sbjct: 280 HRQFAVSTRILRDETRTE--DSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVG 337
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P++ G +D D+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFR
Sbjct: 338 CWHSSMPYSPQSHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFR 397
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 398 IYTAPLATLI 407
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYAI++FDL T+ RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 151 NTTTNPCPYAINIFDLTTNTRIRRYELPAADTNPNTFIANIAVDIGKNCDDAFAYFADE- 209
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G SY L W ++ F + +FN+ G+ F W E
Sbjct: 210 -----LGYGLISYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 254
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++LTP +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 255 GIFGMSLTPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 310
>sp|O02437|YELL_DROSU Protein yellow OS=Drosophila subobscura GN=y PE=3 SV=1
Length = 568
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 134/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++LTP +DG++ L F P+AS
Sbjct: 222 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRSDGYRTLYFSPLAS 279
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +G+ FNLID+NAVG
Sbjct: 280 HRQFAVSTRILRDETRTE--DSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVG 337
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P++ G +D D+ L+FP+D+K+ ++WV+SDRMP+ L S+L+++D NFR
Sbjct: 338 CWHSSMPYSPQSHGIVDRDDVGLVFPADIKIDENKNVWVLSDRMPVFLLSDLDYSDTNFR 397
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 398 IYTAPLATLI 407
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYAI++FDL TD RIR+Y+ D P TFIANIAVD + D +E
Sbjct: 151 NTTTNPCPYAINIFDLATDTRIRRYELPAADTNPNTFIANIAVDIGKSCDDAFAYFADE- 209
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G SY L W ++ F + +FN+ G+ F W E
Sbjct: 210 -----LGYGLISYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 254
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++LTP +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 255 GIFGMSLTPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 310
>sp|Q9BI18|YELL_DROPS Protein yellow OS=Drosophila pseudoobscura pseudoobscura GN=y PE=3
SV=2
Length = 560
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 134/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++LTP +DG++ L F P+AS
Sbjct: 224 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRSDGYRTLYFSPLAS 281
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +G+ FNLID+NAVG
Sbjct: 282 HRQFAVSTRILRDETRIE--DSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVG 339
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D+NFR
Sbjct: 340 CWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDINFR 399
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 400 IYTAPLATLI 409
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYA++VFDL T+ RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 153 NTTTNPCPYAVNVFDLTTNTRIRRYELPAADTNPNTFIANIAVDIGKNCDDAYAYFADE- 211
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G SY L W ++ F + +FN+ G+ F W E
Sbjct: 212 -----LGYGLISYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 256
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++LTP +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 257 GIFGMSLTPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRIE--DSYHDFVALDERG 312
>sp|Q9GP81|YELL_DROGU Protein yellow OS=Drosophila guanche GN=y PE=3 SV=1
Length = 568
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 133/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++LTP +DG++ L F P+AS
Sbjct: 222 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRSDGYRTLYFSPLAS 279
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +G+ FNLID+NAVG
Sbjct: 280 HRQFAVSTRILRDETRTE--DSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVG 337
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFR
Sbjct: 338 CWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFR 397
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 398 IYTAPLATLI 407
Score = 131 bits (329), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYAI++FDL T+ RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 151 NTTTNPCPYAINIFDLTTNTRIRRYELPAADTNPNTFIANIAVDIGKNCDDAFAYFADE- 209
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G SY L W ++ F + +FN+ G+ F W E
Sbjct: 210 -----LGYGLISYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 254
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++LTP +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 255 GIFGMSLTPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 310
>sp|P62407|YELL_DROSI Protein yellow OS=Drosophila simulans GN=y PE=3 SV=1
Length = 541
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 133/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++L+P +DG++ L F P+AS
Sbjct: 215 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLAS 272
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +GI FNLID+NAVG
Sbjct: 273 HRQFAVSTRILRDETRTE--DSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVG 330
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFR
Sbjct: 331 CWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFR 390
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 391 IYTAPLATLI 400
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYA++VFDL TD RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADE- 202
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G +Y L W ++ F + +FN+ G+ F W E
Sbjct: 203 -----LGYGLIAYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 247
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 248 GIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 303
>sp|P62408|YELL_DROMA Protein yellow OS=Drosophila mauritiana GN=y PE=3 SV=1
Length = 541
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 133/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++L+P +DG++ L F P+AS
Sbjct: 215 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLAS 272
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +GI FNLID+NAVG
Sbjct: 273 HRQFAVSTRILRDETRTE--DSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVG 330
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFR
Sbjct: 331 CWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFR 390
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 391 IYTAPLATLI 400
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYA++VFDL TD RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADE- 202
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G +Y L W ++ F + +FN+ G+ F W E
Sbjct: 203 -----LGYGLIAYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 247
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 248 GIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 303
>sp|P09957|YELL_DROME Protein yellow OS=Drosophila melanogaster GN=y PE=1 SV=1
Length = 541
Score = 188 bits (477), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 133/190 (70%), Gaps = 5/190 (2%)
Query: 158 NKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIAS 217
NK+ SA SY + RG+FN+ G+ F W EGIFG++L+P +DG++ L F P+AS
Sbjct: 215 NKSWRFSAHSY--FFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLAS 272
Query: 218 HSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVG 277
H +FAVSTR+LR++T E DSY+ +V + +RG + H TS VM +GI FNLID+NAVG
Sbjct: 273 HRQFAVSTRILRDETRTE--DSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVG 330
Query: 278 CWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFR 336
CW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFR
Sbjct: 331 CWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFR 390
Query: 337 IFTVPLQEAV 346
I+T PL +
Sbjct: 391 IYTAPLATLI 400
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYA++VFDL TD RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADE- 202
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G +Y L W ++ F + +FN+ G+ F W E
Sbjct: 203 -----LGYGLIAYSWELNKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 247
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 248 GIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 303
>sp|Q9BI23|YELL_DROER Protein yellow OS=Drosophila erecta GN=y PE=3 SV=1
Length = 541
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Query: 177 RGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAES 236
RG+FN+ G+ F W EGIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E
Sbjct: 232 RGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE- 290
Query: 237 ADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDID 296
DSY+ +V + +RG + H TS VM +GI FNLID+NAVGCW+S PY P+ G +D D
Sbjct: 291 -DSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRD 349
Query: 297 NEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFRIFTVPLQEAV 346
+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFRI+T PL +
Sbjct: 350 DVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFRIYTAPLATLI 400
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYA++V+DL TD RIR+Y D P TFIANIAVD N D +E
Sbjct: 144 NTTTNPCPYAVNVYDLTTDTRIRRYVLPAVDTNPNTFIANIAVDIGKNCDDAYAYFADE- 202
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G +Y W ++ F + +FN+ G+ F W E
Sbjct: 203 -----LGYGLIAYSWEQDKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 247
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 248 GIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 303
>sp|Q9BI17|YELL_DROYA Protein yellow OS=Drosophila yakuba GN=y PE=3 SV=1
Length = 541
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Query: 177 RGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAES 236
RG+FN+ G+ F W EGIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E
Sbjct: 232 RGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE- 290
Query: 237 ADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDID 296
DSY+ +V + +RG + H TS VM +GI FNLID+NAVGCW+S PY P+ G +D D
Sbjct: 291 -DSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRD 349
Query: 297 NEALIFPSDVKV-VGDDLWVISDRMPIHLESELNFNDVNFRIFTVPLQEAV 346
+ L+FP+DVK+ ++WV+SDRMP+ L S+L+++D NFRI+T PL +
Sbjct: 350 DVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFRIYTAPLATLI 400
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 18/178 (10%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
NTT CPYA++VFDL TD RIR+Y+ D P TFIANIAVD N D +E
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRIRRYELPAVDTNPNTFIANIAVDIGKNCDDAYAYFADE- 202
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ +G +Y W ++ F + +FN+ G+ F W E
Sbjct: 203 -----LGYGLIAYSWEQDKSWRFSAHSYFF----------PDPLRGDFNVAGINFQWGEE 247
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRG 178
GIFG++L+P +DG++ L F P+ASH +FAVSTR+LR++T E DSY+ +V + +RG
Sbjct: 248 GIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTE--DSYHDFVALDERG 303
>sp|O77061|MRJP2_APIME Major royal jelly protein 2 OS=Apis mellifera GN=MRJP2 PE=1 SV=1
Length = 452
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 178 GEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESA 237
+ I G +F GI G+AL+P NL + P+ASH + V+T E+
Sbjct: 236 AKMTIDGESFT-LKNGICGMALSPVT----NNLYYSPLASHGLYYVNTAPFMKSQFGENN 290
Query: 238 DSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDN 297
Y I + + + NG+L+ L+ +AVGCWN + +N+ + ++
Sbjct: 291 VQYQGSEDI----LNTQSLAKAVSKNGVLFVGLVGNSAVGCWNEHQSLQRQNLEMVAQND 346
Query: 298 EALIFPSDVKV-------VGDD-------LWVISDRMPIHLESELNFNDVNFRIFTVPLQ 343
L + +K+ VG + + V+S+RM + + NF+DVNFRI ++
Sbjct: 347 RTLQMIAGMKIKEELPHFVGSNKPVKDEYMLVLSNRMQKIVNDDFNFDDVNFRILGANVK 406
Query: 344 EAVR 347
E +R
Sbjct: 407 ELIR 410
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 24/209 (11%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
N T +C +HVFDLKT +++ + P DI AV+ + ++ +
Sbjct: 145 NRTVPVCAPKLHVFDLKTSNHLKQIEI-PHDI---------AVNATTGKGGLVSLAVQAI 194
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ + + + +D L I + +D+F L+ ++ I G +F
Sbjct: 195 DLANTLVYMADHKGDAL-IVYQNADDSFH---RLTSNTFDYDPRYAKMTIDGESFT-LKN 249
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGEF 180
GI G+AL+P NL + P+ASH + V+T E+ Y G
Sbjct: 250 GICGMALSPVT----NNLYYSPLASHGLYYVNTAPFMKSQFGENNVQYQ-----GSEDIL 300
Query: 181 NIGGLTFHWFPEGIFGIALTPPEADGFKN 209
N L G+ + L A G N
Sbjct: 301 NTQSLAKAVSKNGVLFVGLVGNSAVGCWN 329
>sp|O18330|MRJP1_APIME Major royal jelly protein 1 OS=Apis mellifera GN=MRJP1 PE=1 SV=1
Length = 432
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 192 EGIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGR 251
+GI G+AL+P NL + P+AS S + V+T R ++ Y I
Sbjct: 251 DGISGMALSPMT----NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNI----L 302
Query: 252 DGHLTSHVMDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKVVG- 310
D ++ V+ +G+L+F L+ +A+GCWN + NI + +E L + +K+
Sbjct: 303 DTQSSAKVVSKSGVLFFGLVGDSALGCWNEHRTLERHNIRTVAQSDETLQMIASMKIKEA 362
Query: 311 -------------DDLWVISDRMPIHLESELNFNDVNFRIFTVPLQEAV 346
+ + V+S++M + ++ NF+DVNFRI + E +
Sbjct: 363 LPHVPIFDRYINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELI 411
>sp|O97432|MRJP5_APIME Major royal jelly protein 5 OS=Apis mellifera GN=MRJP5 PE=2 SV=1
Length = 598
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 171 YVKIGDRGEFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRN 230
Y+K+ D GE T +GIFG+AL+P NL + P++S S + V+T+
Sbjct: 238 YIKMMDAGE----SFTAQ---DGIFGMALSPMT----NNLYYSPLSSRSLYYVNTKPFMK 286
Query: 231 KTLAESADSYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVGCWNSQYPYKPENI 290
+ Y I + + +M NG+L+F L++ +A+GCWN P + EN+
Sbjct: 287 SEYGANNVQYQGVQDIFN----TESIAKIMSKNGVLFFGLMNNSAIGCWNEHQPLQRENM 342
Query: 291 GHIDIDNEAL 300
+ + E L
Sbjct: 343 DMVAQNEETL 352
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
N T+ +C +HVFDL T ++++ ++P +IAV+ ++ N ++ + +
Sbjct: 148 NNTQPMCSPKLHVFDLNTSHQLKQV------VMP----HDIAVNASTGNGGLVSLVVQAM 197
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
++ + + +D L + N E N D ++ G +F +
Sbjct: 198 DPVNTIVYMADDKGDALIVYQNSDESFHRLTSNTFDYDPKYIKMMD----AGESFT-AQD 252
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTR 154
GIFG+AL+P NL + P++S S + V+T+
Sbjct: 253 GIFGMALSPMT----NNLYYSPLSSRSLYYVNTK 282
>sp|Q17061|MRJP4_APIME Major royal jelly protein 4 OS=Apis mellifera GN=MRJP4 PE=1 SV=1
Length = 464
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 50/224 (22%)
Query: 140 FHPIASHSEFAVSTRVLRNKTLAESADSYNAYVKIGDRGEFNIGGLTFHWFPEGIFGIAL 199
FH ++SH TL ++D K+ D+ E LT ++G+AL
Sbjct: 221 FHRLSSH-------------TLNHNSD------KMSDQQE----NLTLKEVDNKVYGMAL 257
Query: 200 TPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYN--AYVKIGDRGRDGHLTS 257
+P NL ++ +S + + V+T ++L +S + N Y ++ D D LT
Sbjct: 258 SPVT----HNLYYNSPSSENLYYVNT-----ESLMKSENQGNDVQYERVQDVF-DSQLTV 307
Query: 258 HVMDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKVV-------- 309
+ NG+L F L + N + CWN +NI + + + L +K+
Sbjct: 308 KAVSKNGVLLFGLAN-NTLSCWNEHQSLDRQNIDVVARNEDTLQMVVSMKIKQNVPQSGR 366
Query: 310 ------GDDLWVISDRMPIHLESELNFNDVNFRIFTVPLQEAVR 347
+ L +SDR L ++LN VNF+I + + +R
Sbjct: 367 VNNTQRNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIR 410
>sp|Q17060|MRJP3_APIME Major royal jelly protein 3 OS=Apis mellifera GN=MRJP3 PE=1 SV=1
Length = 544
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Query: 179 EFNIGGLTFHWFPEGIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESAD 238
+ + G +F GI+GIAL+P NL + P+ SH + V T N E+
Sbjct: 242 KLTVAGESF-TVKNGIYGIALSPVT----NNLYYSPLLSHGLYYVDTEQFSNPQYEENNV 296
Query: 239 SYNAYVKIGDRGRDGHLTSHVMDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNE 298
Y I + G + S NG+L+ L+ + + C N + E+ + + E
Sbjct: 297 QYEGSQDILNTQSFGKVVS----KNGVLFLGLVGNSGIACVNEHQVLQRESFDVVAQNEE 352
Query: 299 ALIFPSDVKVV 309
L +K++
Sbjct: 353 TLQMIVSMKIM 363
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 19/168 (11%)
Query: 1 NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQ 60
N + +C + FDLKT + +++ + +P NIAV+ + +++ +
Sbjct: 150 NNNQPMCSPKLLTFDLKTSKLVKQVE------IP----HNIAVNATTGMGELVSLAVQAI 199
Query: 61 RMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVNLSDTKCSKRSILSEFNIGGLTFHWFPE 120
+ + + +D + L I + +D+F L+ ++ + G +F
Sbjct: 200 DRTNTMVYIADEKGEGL-IMYQNSDDSFH---RLTSNTFDYDPRYTKLTVAGESF-TVKN 254
Query: 121 GIFGIALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSY 168
GI+GIAL+P NL + P+ SH + V T N E+ Y
Sbjct: 255 GIYGIALSPVT----NNLYYSPLLSHGLYYVDTEQFSNPQYEENNVQY 298
>sp|Q9R053|SCNBA_MOUSE Sodium channel protein type 11 subunit alpha OS=Mus musculus
GN=Scn11a PE=1 SV=2
Length = 1765
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 115 FHWFPEG--IFG--IALTPPEADGFKNLLFHPIASHSEFAVSTRVLRNKTLAESADSYNA 170
+H+F G IF +AL ++LFH ++ + F S RVLR LA+S + N
Sbjct: 632 YHYFRHGWNIFDSIVALV-----SLADVLFHKLSKNLSFLASLRVLRVFKLAKSWPTLNT 686
Query: 171 YVKIGDRGEFNIGGLT 186
+KI +G LT
Sbjct: 687 LIKIIGHSVGALGNLT 702
>sp|B1VGL9|OBG_CORU7 GTPase obg OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM
7109) GN=obg PE=3 SV=1
Length = 504
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 106 SEFNIGGLTFHWFPEGIFGIALTP 129
SE IGG+TF W P+ + G+ TP
Sbjct: 431 SEVTIGGITFEWDPQTVAGVDQTP 454
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 176 DRGEFNIGGLTFHWFPEGIFGIALTP 201
D E IGG+TF W P+ + G+ TP
Sbjct: 429 DGSEVTIGGITFEWDPQTVAGVDQTP 454
>sp|B6YRS4|SYL_AZOPC Leucine--tRNA ligase OS=Azobacteroides pseudotrichonymphae
genomovar. CFP2 GN=leuS PE=3 SV=1
Length = 918
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 46 ASNNLDILKSIPEEQRMLSEVEWGSDSYLKVLGIQWNPKEDTFSFCVN-LSDTKCSKRSI 104
SN+L + K + +++ +V W +++ +N F C+N L+ KCSK SI
Sbjct: 758 VSNSLPLDKELKSIHKLIKKVSWDIENF------SFNTSVAAFMICINELTLLKCSKHSI 811
Query: 105 LSEFNI 110
LS+ I
Sbjct: 812 LSDLVI 817
>sp|Q63TM2|SYT_BURPS Threonine--tRNA ligase OS=Burkholderia pseudomallei (strain K96243)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|A3N8T1|SYT_BURP6 Threonine--tRNA ligase OS=Burkholderia pseudomallei (strain 668)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|Q3JT13|SYT_BURP1 Threonine--tRNA ligase OS=Burkholderia pseudomallei (strain 1710b)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|A3NUI4|SYT_BURP0 Threonine--tRNA ligase OS=Burkholderia pseudomallei (strain 1106a)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|A1V3R3|SYT_BURMS Threonine--tRNA ligase OS=Burkholderia mallei (strain SAVP1)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|Q62KI2|SYT_BURMA Threonine--tRNA ligase OS=Burkholderia mallei (strain ATCC 23344)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|A2S2N6|SYT_BURM9 Threonine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10229)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|A3MJT8|SYT_BURM7 Threonine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10247)
GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|Q2SVD8|SYT_BURTA Threonine--tRNA ligase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=thrS PE=3 SV=1
Length = 635
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 26 QFRPEDILPGTFIANIAVDFASNNLDILKSIPEEQRMLSEVEW-----GSDSYLKVLGIQ 80
Q E I ++ DF + +DI S+ EQRM S+ W G + LK G++
Sbjct: 391 QINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLE 450
Query: 81 WN--PKEDTF 88
W P E F
Sbjct: 451 WEELPGEGAF 460
>sp|P91341|PWP2_CAEEL Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans
GN=F55F8.3 PE=3 SV=2
Length = 910
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 132 ADGFKNLLFHPIASHSEFAVSTRVLRN 158
A FKNL HP+ASH + V+ + ++N
Sbjct: 175 AKDFKNLFIHPLASHKGYIVNCQFMKN 201
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 204 ADGFKNLLFHPIASHSEFAVSTRVLRN 230
A FKNL HP+ASH + V+ + ++N
Sbjct: 175 AKDFKNLFIHPLASHKGYIVNCQFMKN 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,915,822
Number of Sequences: 539616
Number of extensions: 5704229
Number of successful extensions: 11603
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 11534
Number of HSP's gapped (non-prelim): 56
length of query: 347
length of database: 191,569,459
effective HSP length: 118
effective length of query: 229
effective length of database: 127,894,771
effective search space: 29287902559
effective search space used: 29287902559
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)