BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11727
(437 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/355 (68%), Positives = 296/355 (83%), Gaps = 3/355 (0%)
Query: 80 SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
S+KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D E+ VA
Sbjct: 6 SHKKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 64
Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLY 198
IKIIKNKK FLNQAQIEV+LLE +NK D +Y IV LK HF ++NHLCLVFE+LSYNLY
Sbjct: 65 IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 124
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+
Sbjct: 125 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV 184
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
DFGSSC +GQ +YQ IQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NE
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTI 377
VDQM KI+EVLG+PP ++L A K K+F++L D ++ LKK+ D ++E + PG+++L I
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 304
Query: 378 LGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
LGV+ H++ADY+KFKDLILRML YDPK RI P L+H FF K
Sbjct: 305 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 359
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/355 (68%), Positives = 296/355 (83%), Gaps = 3/355 (0%)
Query: 80 SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
S+KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D E+ VA
Sbjct: 25 SHKKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLY 198
IKIIKNKK FLNQAQIEV+LLE +NK D +Y IV LK HF ++NHLCLVFE+LSYNLY
Sbjct: 84 IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 143
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV 203
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
DFGSSC +GQ +YQ IQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NE
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTI 377
VDQM KI+EVLG+PP ++L A K K+F++L D ++ LKK+ D ++E + PG+++L I
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323
Query: 378 LGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
LGV+ H++ADY+KFKDLILRML YDPK RI P L+H FF K
Sbjct: 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/355 (68%), Positives = 295/355 (83%), Gaps = 3/355 (0%)
Query: 80 SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
S+KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D E+ VA
Sbjct: 25 SHKKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLY 198
IKIIKNKK FLNQAQIEV+LLE +NK D +Y IV LK HF ++NHLCLVFE+LSYNLY
Sbjct: 84 IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 143
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKR AIKI+
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIV 203
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
DFGSSC +GQ +YQ IQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NE
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTI 377
VDQM KI+EVLG+PP ++L A K K+F++L D ++ LKK+ D ++E + PG+++L I
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323
Query: 378 LGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
LGV+ H++ADY+KFKDLILRML YDPK RI P L+H FF K
Sbjct: 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 206/358 (57%), Gaps = 37/358 (10%)
Query: 89 HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
+N G+DD+ Y+ + RYE+ ++GKGSFGQVVKA+DH+ VA+K+++N+K
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 149 FLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
F QA E+++LE + K D ++ ++ + +FT++NH+C+ FELLS NLY LI+ F
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
G SL L +KFA + L L IIHCDLKPENILL RS IK+IDFGSSC+
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
Q +Y IQSR+YR+PEV+LG Y + IDMWSLGCIL EL TG PL G++E DQ+ +IE
Sbjct: 254 QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313
Query: 328 VLGMPPGYLLHGASKTSKYF------------DRLSDNSYVLKKSTDTR-KERLPGSKRL 374
+LGMP LL ASK +K F LSD S VL R K R P R
Sbjct: 314 LLGMPSQKLLD-ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESRE 372
Query: 375 --DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ + G D F D + + L +DP R++P LRH +
Sbjct: 373 WGNALKGCDDPL------------------FLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 206/358 (57%), Gaps = 37/358 (10%)
Query: 89 HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
+N G+DD+ Y+ + RYE+ ++GKGSFGQVVKA+DH+ VA+K+++N+K
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 149 FLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
F QA E+++LE + K D ++ ++ + +FT++NH+C+ FELLS NLY LI+ F
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
G SL L +KFA + L L IIHCDLKPENILL RS IK+IDFGSSC+
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
Q +Y IQSR+YR+PEV+LG Y + IDMWSLGCIL EL TG PL G++E DQ+ +IE
Sbjct: 254 QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313
Query: 328 VLGMPPGYLLHGASKTSKYF------------DRLSDNSYVLKKSTDTR-KERLPGSKRL 374
+LGMP LL ASK +K F LSD S VL R K R P R
Sbjct: 314 LLGMPSQKLLD-ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESRE 372
Query: 375 --DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ + G D F D + + L +DP R++P LRH +
Sbjct: 373 WGNALKGCDDPL------------------FLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 205/358 (57%), Gaps = 37/358 (10%)
Query: 89 HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
+N G+DD+ Y+ + RYE+ ++GKG FGQVVKA+DH+ VA+K+++N+K
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 149 FLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
F QA E+++LE + K D ++ ++ + +FT++NH+C+ FELLS NLY LI+ F
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
G SL L +KFA + L L IIHCDLKPENILL RS IK+IDFGSSC+
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
Q +Y IQSR+YR+PEV+LG Y + IDMWSLGCIL EL TG PL G++E DQ+ +IE
Sbjct: 254 QRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313
Query: 328 VLGMPPGYLLHGASKTSKYF------------DRLSDNSYVLKKSTDTR-KERLPGSKRL 374
+LGMP LL ASK +K F LSD S VL R K R P R
Sbjct: 314 LLGMPXQKLLD-ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESRE 372
Query: 375 --DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ + G D F D + + L +DP R++P LRH +
Sbjct: 373 WGNALKGCDDPL------------------FLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)
Query: 94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
DD+ + + G+ +RYEI LG+G+FG+VV+ DH K QVA+KII+N +
Sbjct: 12 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 153 AQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
A++E+ +L+KI + D ++++ V + F + H+C+ FELL N + ++ NF L
Sbjct: 72 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSA 254
+ A QLC AL FL +L+ H DLKPENIL S K ++
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
I++ DFGS+ + + +R+YR PEV+L + + D+WS+GCIL E + G LF
Sbjct: 190 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
+ + + ++LG P +++H K KYF + V +++ + K L
Sbjct: 250 THENREHLVMMEKILGPIPSHMIHRTRK-QKYFYK---GGLVWDENSSDGRYVKENCKPL 305
Query: 375 DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ + D ++++ DL+ RML +DP +RI+ L H FF
Sbjct: 306 KSYMLQDSL---------------EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)
Query: 94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
DD+ + + G+ +RYEI LG+G+FG+VV+ DH K QVA+KII+N +
Sbjct: 35 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 153 AQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
A++E+ +L+KI + D ++++ V + F + H+C+ FELL N + ++ NF L
Sbjct: 95 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSA 254
+ A QLC AL FL +L+ H DLKPENIL S K ++
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
I++ DFGS+ + + +R+YR PEV+L + + D+WS+GCIL E + G LF
Sbjct: 213 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
+ + + ++LG P +++H K KYF + V +++ + K L
Sbjct: 273 THENREHLVMMEKILGPIPSHMIHRTRK-QKYFYK---GGLVWDENSSDGRYVKENCKPL 328
Query: 375 DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ + D ++++ DL+ RML +DP +RI+ L H FF
Sbjct: 329 KSYMLQDSL---------------EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)
Query: 94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
DD+ + + G+ +RYEI LG+G+FG+VV+ DH K QVA+KII+N +
Sbjct: 3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 153 AQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
A++E+ +L+KI + D ++++ V + F + H+C+ FELL N + ++ NF L
Sbjct: 63 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSA 254
+ A QLC AL FL +L+ H DLKPENIL S K ++
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
I++ DFGS+ + + +R+YR PEV+L + + D+WS+GCIL E + G LF
Sbjct: 181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
+ + + ++LG P +++H K KYF + V +++ + K L
Sbjct: 241 THENREHLVMMEKILGPIPSHMIHRTRK-QKYFYK---GGLVWDENSSDGRYVKENCKPL 296
Query: 375 DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ + D ++++ DL+ RML +DP +RI+ L H FF
Sbjct: 297 KSYMLQDSL---------------EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 46/358 (12%)
Query: 101 IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQL 159
I + G+ RYEI LG+G+FG+VV+ DH+ + VA+KI+KN + A+ E+Q+
Sbjct: 5 ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV 64
Query: 160 LEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
LE +N D +S + V++ F H+C+VFELL + Y+ I+ F L+ +K A
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLC--------SPK---------RSAIKIIDFG 261
Q+C ++ FL S +L+ H DLKPENIL +PK IK++DFG
Sbjct: 125 YQICKSVNFLHSNKLT--HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
S+ + + + +R+YR+PEV+L + + D+WS+GCIL+E + G +F + +
Sbjct: 183 SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILG 379
+ + +LG P +++ K KYF DRL + + S+ R + +L
Sbjct: 243 LAMMERILGPLPKHMIQKTRK-RKYFHHDRLDWDEH----SSAGRYVSRACKPLKEFMLS 297
Query: 380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF--LKHSV 435
D ++ + DLI +ML YDP KRI+ L+H FF LK S+
Sbjct: 298 QD----------------VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 184/358 (51%), Gaps = 46/358 (12%)
Query: 101 IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQL 159
I + G+ RYEI LG+G+FG+VV+ DH+ + VA+KI+KN + A+ E+Q+
Sbjct: 5 ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV 64
Query: 160 LEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
LE +N D +S + V++ F H+C+VFELL + Y+ I+ F L+ +K A
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLC--------SPK---------RSAIKIIDFG 261
Q+C ++ FL S +L+ H DLKPENIL +PK IK++DFG
Sbjct: 125 YQICKSVNFLHSNKLT--HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
S+ + + + R+YR+PEV+L + + D+WS+GCIL+E + G +F + +
Sbjct: 183 SATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILG 379
+ + +LG P +++ K KYF DRL + + S+ R + +L
Sbjct: 243 LAMMERILGPLPKHMIQKTRK-RKYFHHDRLDWDEH----SSAGRYVSRACKPLKEFMLS 297
Query: 380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF--LKHSV 435
D ++ + DLI +ML YDP KRI+ L+H FF LK S+
Sbjct: 298 QD----------------VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 185/359 (51%), Gaps = 41/359 (11%)
Query: 94 DDENYDYIIKH-GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK-CQVAIKIIKNKKPFLN 151
+D+ ++I H G+ +RYEI + LG+G+FG+VV+ DH +VA+KIIKN + +
Sbjct: 16 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 75
Query: 152 QAQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVS 210
A++E+ +LEKIN+ D ++ + V++ F + H+C+ FELL + ++ +++ N+
Sbjct: 76 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRS 253
++ + A QLC A+ FL +L+ H DLKPENIL S K +
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLT--HTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 254 AIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
A++++DFGS+ + + +R+YR+PEV+L + + D+WS+GCI+ E + G LF
Sbjct: 194 AVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF 253
Query: 314 SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKR 373
+ + + + +LG P ++ K KYF R ++T + K
Sbjct: 254 QTHDNREHLAMMERILGPIPSRMIRKTRK-QKYFYR---GRLDWDENTSAGRYVRENCKP 309
Query: 374 LDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
L L + ++ + DLI ML Y+P KR++ L+H FF +
Sbjct: 310 LRRYLTSEA---------------EEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFAR 353
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 22/265 (8%)
Query: 105 GEKFLD-RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
GE + D RY + LG G F V A D VA+KI++ K + A+ E++LL+++
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 164 NKAD------IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
N AD + + +I+KL HF K H+ +VFE+L NL LI+ G+ L
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILL---CSPKR-SAIKIIDFGSSCHVGQT 269
K+ ++QL L ++ IIH D+KPEN+L+ SP+ IKI D G++C +
Sbjct: 133 VKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF------SGKNEVDQMT 323
IQ+R YRSPEVLLG P+ D+WS C++ EL TG+ LF S + D +
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFD 348
+IIE+LG P YLL T +F+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFN 276
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 22/265 (8%)
Query: 105 GEKFLD-RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
GE + D RY + LG G F V A D VA+KI++ K + A+ E++LL+++
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 164 NKAD------IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
N AD + + +I+KL HF K H+ +VFE+L NL LI+ G+ L
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILL---CSPKR-SAIKIIDFGSSCHVGQT 269
K+ ++QL L ++ IIH D+KPEN+L+ SP+ IKI D G++C +
Sbjct: 133 VKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF------SGKNEVDQMT 323
IQ+R YRSPEVLLG P+ D+WS C++ EL TG+ LF S + D +
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFD 348
+IIE+LG P YLL T +F+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFN 276
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 175/362 (48%), Gaps = 46/362 (12%)
Query: 94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA 153
DDE + K G + + + +G G+FG+V+ + K A+K+++N K + A
Sbjct: 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA 78
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
+IE +L+KI DI++ IVK G F + +H+CL+FE L +LY +I N++G +
Sbjct: 79 KIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED 138
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP----------------------- 250
K + ++ AL +L ++S+ H DLKPENILL P
Sbjct: 139 IKLYCIEILKALNYLR--KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
Query: 251 KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE 310
K + IK+IDFG + I +R YR+PEV+L + +D++ DMWS GC+L EL+TG
Sbjct: 197 KSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 311 PLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERL 368
LF ++ + + ++ P +L+ A+KT SKY ++ + +L
Sbjct: 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNK--------------DELKL 302
Query: 369 PGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHE 428
+ +I + H L F D + +L DP R SP +L+H+
Sbjct: 303 AWPENASSINSIKHVKKCLPLYKIIKHEL-----FCDFLYSILQIDPTLRPSPAELLKHK 357
Query: 429 FF 430
F
Sbjct: 358 FL 359
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 177/407 (43%), Gaps = 90/407 (22%)
Query: 92 GHDDEN----YDYI------IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK 141
G DDE DY +K G+ F RY + LG G F V +D + K VA+K
Sbjct: 3 GSDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMK 62
Query: 142 IIKNKKPFLNQAQIEVQLLEKI---NKADIHSRYIVKLKGHFTWKN----HLCLVFELLS 194
++K+ + + A E++LL+ + + +D + +V+L F H+C+VFE+L
Sbjct: 63 VVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLG 122
Query: 195 YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC------ 248
++L I +N+ G+ + K +Q+ L +L S + IIH D+KPENIL+C
Sbjct: 123 HHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHS-KCKIIHTDIKPENILMCVDDAYV 181
Query: 249 ----------------SPKRSA-----------------------IKIIDFGSSCHVGQT 269
P SA +KI D G++C V +
Sbjct: 182 RRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKH 241
Query: 270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF---SGKN---EVDQMT 323
+ IQ+R YRS EVL+G Y D+WS C+ EL TG+ LF SG++ + D +
Sbjct: 242 FTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIA 301
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXX 383
IIE+LG P + + ++F+R + ++ K L D ++
Sbjct: 302 HIIELLGSIPRHFALSGKYSREFFNRRGELRHITK---------LKPWSLFDVLV----- 347
Query: 384 XXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
D +F D ++ ML P+KR S LRH +
Sbjct: 348 -------EKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWL 387
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 175/406 (43%), Gaps = 91/406 (22%)
Query: 94 DDENYD---------YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
DDE D +++K G+ F RY + LG G F V ++D + K VA+K++K
Sbjct: 12 DDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK 71
Query: 145 NKKPFLNQAQIEVQLLEKINKADIHS---RYIVKLKGHFTWKN----HLCLVFELLSYNL 197
+ + + A E++LL+ + +D + +V+L F H+C+VFE+L ++L
Sbjct: 72 SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 131
Query: 198 YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC--------- 248
I +N+ G+ L KK QQ+ L +L + + IIH D+KPENILL
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRL 190
Query: 249 -------------SPKRSA-------------------------IKIIDFGSSCHVGQTL 270
P SA +KI D G++C V +
Sbjct: 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF 250
Query: 271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF---SGKN---EVDQMTK 324
+ IQ+R YRS EVL+G Y+ D+WS C+ EL TG+ LF SG+ + D +
Sbjct: 251 TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIAL 310
Query: 325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXX 384
IIE+LG P L+ + ++F + D ++ K E L
Sbjct: 311 IIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL---------------- 354
Query: 385 XXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
S + F D +L ML P+KR + LRH +
Sbjct: 355 -----VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 171/391 (43%), Gaps = 82/391 (20%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQL 159
+++K G+ F RY + LG G F V ++D + K VA+K++K+ + + A E++L
Sbjct: 11 HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRL 70
Query: 160 LEKINKADIHS---RYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLN 212
L+ + +D + +V+L F H+C+VFE+L ++L I +N+ G+ L
Sbjct: 71 LKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLP 130
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC----------------------SP 250
KK QQ+ L +L + + IIH D+KPENILL P
Sbjct: 131 CVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPP 189
Query: 251 KRSA-------------------------IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL 285
SA +KI D G++C V + + IQ+R YRS EVL
Sbjct: 190 SGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL 249
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF---SGKN---EVDQMTKIIEVLGMPPGYLLHG 339
+G Y+ D+WS C+ EL TG+ LF SG+ + D + IIE+LG P L+
Sbjct: 250 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA 309
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
+ ++F + D ++ K E L S +
Sbjct: 310 GKYSKEFFTKKGDLKHITKLKPWGLFEVL---------------------VEKYEWSQEE 348
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
F D +L ML P+KR + LRH +
Sbjct: 349 AAGFTDFLLPMLELIPEKRATAAECLRHPWL 379
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE LS +L + + G+ L L K + QL LAF S
Sbjct: 67 KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKPEN+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE LS +L + + G+ L L K + QL LAF S
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKPEN+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 151/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE LS +L + + + G+ L L K + QL LAF S
Sbjct: 68 KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 151/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE LS +L + + + G+ L L K + QL LAF S
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKPEN+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 56/334 (16%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKI 163
+F++ ++ +G+G++G V KA + VA+K I+ + + A E+ LL+++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
N +I VKL +N L LVFE L +L + + G+ L L K + QL
Sbjct: 67 NHPNI-----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYR 280
LAF S ++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR
Sbjct: 122 GLAFCHSHR--VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
+PE+LLG Y A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHS 396
+ Y K P R D + +D
Sbjct: 238 VTSMPDY------------------KPSFPKWARQDFSKVVPPLDEDG------------ 267
Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ L+ +ML YDP KRIS L H FF
Sbjct: 268 -------RSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 56/334 (16%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKI 163
+F++ ++ +G+G++G V KA + VA+K I+ + + A E+ LL+++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
N +I VKL +N L LVFE L +L + + G+ L L K + QL
Sbjct: 67 NHPNI-----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYR 280
LAF S ++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR
Sbjct: 122 GLAFCHSHR--VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
+PE+LLG Y A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHS 396
+ Y K P R D + +D
Sbjct: 238 VTSMPDY------------------KPSFPKWARQDFSKVVPPLDEDG------------ 267
Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ L+ +ML YDP KRIS L H FF
Sbjct: 268 -------RSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKPEN+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKPEN+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 69
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 127
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 128 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 241
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 242 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 268
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 269 SQMLHYDPNKRISAKAALAHPFF 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 69
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 127
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 128 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 241
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 242 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 268
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 269 SQMLHYDPNKRISAKAALAHPFF 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL L+F S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 49/340 (14%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
+ K +DR++++ + G+G+FG V + VAIK + F N+ E+Q+++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQD 72
Query: 163 INKADIHSRYIVKLKGHFTWKN-------HLCLVFELLSYNLYNLIRNTNFHGVSLN--L 213
+ A +H IV+L+ +F +L +V E + L+ RN V+ L
Sbjct: 73 L--AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL--Y 271
K F QL ++ L P +++ H D+KP N+L+ + +K+ DFGS+ + +
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDFGSAKKLSPSEPNV 189
Query: 272 QYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
YI SRYYR+PE++ G Y A+D+WS+GCI E+ GEP+F G N Q+ +I+ VLG
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249
Query: 331 MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXX 390
P +L + + D + +P S
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKG-------------IPWSNVFSD-------------- 282
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
HSL D + DL+ +L Y P++R+ P L H +F
Sbjct: 283 ----HSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 148/323 (45%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+ I+ + + A E+ LL+++N +I V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 148/323 (45%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+ I+ + + A E+ LL+++N +I V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE L +L + + G+ L L K + QL LAF S
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE + +L + + G+ L L K + QL LAF S
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+G+G++G V KA + VA+K I+ + + A E+ LL+++N +I V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
KL +N L LVFE + +L + + G+ L L K + QL LAF S
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
++H DLKP+N+L+ + AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
A+D+WSLGCI E+ T LF G +E+DQ+ +I LG P + G + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
K P R D + +D + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
+ML YDP KRIS L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 112
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 173 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 116
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 177 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 280
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 91
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 152 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 208
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 114
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 175 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 278
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 157
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 218 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 106
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 167 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 270
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 83
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 144 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 247
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 151/331 (45%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V AFD VA+K K +PF NQ + E + +
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
C + L S IIH DLKP NI++ S +KI+DFG ++C + Y+ +RYY
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAC-TNFMMTPYVVTRYY 191
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
R+PEV+LG+ Y +D+WS+GCI+ EL G +F G + +DQ K+IE LG P +
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
T + +YV + + PG K + L D S A
Sbjct: 252 LQPTVR--------NYV------ENRPKYPGIKFEE--LFPDWIFPSESERDKIKTSQA- 294
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+DL+ +ML DP KRIS LRH +
Sbjct: 295 ----RDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ YI SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S + +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 145/330 (43%), Gaps = 39/330 (11%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V AFD VA+K K +PF NQ + E + +
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I H Q+
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLLYQML 134
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + + Y+ +RYYR
Sbjct: 135 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTASTNFMMTPYVVTRYYR 190
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ EL G +F G + +DQ K+IE LG P +
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 250
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADY 400
T + +YV + PG + +
Sbjct: 251 QPTVR--------NYV------ENRPAYPG-------IAFEELFPDWIFPSESERDKIKT 289
Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS LRH +
Sbjct: 290 SQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 153/341 (44%), Gaps = 58/341 (17%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
+DRY T LG+G++G+V KA D VAIK I+ ++ A EV LL+
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLK---- 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLI-RNTNFHGVSLNLTKKFAQQLCCA 224
++ R I++LK + L L+FE +L + +N + VS+ + K F QL
Sbjct: 89 -ELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD---VSMRVIKSFLYQLING 144
Query: 225 LAFLSSPELSIIHCDLKPENILLC---SPKRSAIKIIDFGSSCHVGQTLYQY---IQSRY 278
+ F S +H DLKP+N+LL + + +KI DFG + G + Q+ I + +
Sbjct: 145 VNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW 202
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR PE+LLG Y ++D+WS+ CI E+ PLF G +E+DQ+ KI EVLG+P
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPG--SKRLDTILGVDXXXXXXXXXXXXXH 395
G + + K+ P K L +LG
Sbjct: 263 PGVTALPDW------------------KQSFPKFRGKTLKRVLGALLDDEGLDLLTA--- 301
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVD 436
ML DP KRIS N L H +F + D
Sbjct: 302 --------------MLEMDPVKRISAKNALEHPYFSHNDFD 328
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S + +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 137
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 138 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 254 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 291
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 130 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 246 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 283
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 130
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 131 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 247 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 284
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 174
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 175 CGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 291 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 328
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 137
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 138 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 254 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 291
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 79
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 136 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 191
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 251
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 252 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 289
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 290 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 130
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 131 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 247 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 284
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 162/347 (46%), Gaps = 44/347 (12%)
Query: 96 ENYDYIIKHGEK---FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
+N Y ++ G+ L RY+ +G G+ G V A+D VAIK K +PF NQ
Sbjct: 45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 102
Query: 153 AQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNF 206
+ E + ++ + I+ L FT + L LV EL+ NL +I+
Sbjct: 103 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 162
Query: 207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
H Q+ C + L S IIH DLKP NI++ S +KI+DFG +
Sbjct: 163 H----ERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTA 214
Query: 267 GQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
G + + Y+ +RYYR+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 325 IIEVLGMP-PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXX 383
+IE LG P P ++ Y + K + T + P D++ D
Sbjct: 275 VIEQLGTPCPEFMKKLQPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-- 321
Query: 384 XXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
H+ + +DL+ +ML DP KRIS + L+H +
Sbjct: 322 ---------SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 90
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 151 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 112
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 173 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 147 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 203
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 250
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 97
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 158 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 214
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 261
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 90
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 151 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 82
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 143 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 199
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 246
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 79
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 140 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 196
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G + +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
+ L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 XGIKHLHS--AGIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
LG G++ V K + VA+K +K +++ + A E+ L++++ +I V+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI-----VR 67
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNF----HGVSLNLTKKFAQQLCCALAFLSSP 231
L +N L LVFE + +L + + G+ LNL K F QL LAF
Sbjct: 68 LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-- 125
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGI 288
E I+H DLKP+N+L+ KR +K+ DFG + G T + + +YR+P+VL+G
Sbjct: 126 ENKILHRDLKPQNLLIN--KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 289 -PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY 346
Y +ID+WS GCIL E+ TG+PLF G N+ +Q+ I +++G P L +K KY
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
Y ++G GSFG V +A + VAIK + K F N+ E+Q++ K++ +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
RY G +L LV + + +Y + R+ + +L + K + QL +LA++
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S I H D+KP+N+LL P + +K+ DFGS+ + G+ I SRYYR+PE++
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
G Y +ID+WS GC+L EL G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 137
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 138 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 254 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 290
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 291 KASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 57/339 (16%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
K GE+ Y ++G GSFG V +A E +VAIK + K F N+ E+Q++
Sbjct: 33 KTGEQREIAYTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKNR---ELQIMRI 88
Query: 163 INKADIHSRYIVKLKGHFTWKN------HLCLVFELLSYNLYNLIRNTNF--HGVSLNLT 214
+ ++ V LK F L LV E + +Y R+ + + L
Sbjct: 89 VKHPNV-----VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQ 272
K + QL +LA++ S + I H D+KP+N+LL P +K+IDFGS+ G+
Sbjct: 144 KLYMYQLLRSLAYIHS--IGICHRDIKPQNLLL-DPPSGVLKLIDFGSAKILIAGEPNVS 200
Query: 273 YIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
I SRYYR+PE++ G Y ID+WS GC++ EL G+PLF G++ +DQ+ +II+VLG
Sbjct: 201 XICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGT 260
Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
P S+ + + +Y+ K R P SK D
Sbjct: 261 P-----------SREQIKTMNPNYMEHKFPQIRPH--PFSKVFRPRTPPDAI-------- 299
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
DLI R+L Y P R++ L H FF
Sbjct: 300 -------------DLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
+ L S IIH DLKP NI++ S + +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 VGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
+ L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 XGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 82
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 138
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + ++ +RYYR
Sbjct: 139 CGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMVPFVVTRYYR 194
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 254
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 255 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 291
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 292 KASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D VAIK K +PF NQ + E + +
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L LV EL+ NL +I+ H Q+
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
+ L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 130 XGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
Y + K + T + P D++ D H+
Sbjct: 246 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 283
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML DP KRIS + L+H +
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G VV A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
+ L S IIH DLKP NI++ S + +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 VGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+G I+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 85
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 141
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 142 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P +
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 257
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 258 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 294
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 295 KASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 130
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + Y+ +RYYR
Sbjct: 131 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P +
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 247 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 283
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 284 KASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ S LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------SQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + S +KI+DFG H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLCRHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 150/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY--IQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + +RYYR
Sbjct: 137 CGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPEVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNAL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 86 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + S +KI+DFG + H + Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 250 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 82 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + S +KI+DFG + H + Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 72/355 (20%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN------ 164
+Y + LG GSFG V + FD E + A+K + + N+ +++L+ +N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 165 --------------KADIHSRYIVKLKG----------HFTWKNHLCLVFELLSYNLYNL 200
D H++ K G + + +L ++ E + L+ +
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 201 IRNTNFHG--VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+++ G + +NL + QL A+ F+ S L I H D+KP+N+L+ S K + +K+
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--LGICHRDIKPQNLLVNS-KDNTLKLC 184
Query: 259 DFGSSCHV--GQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSG 315
DFGS+ + + I SR+YR+PE++LG Y +ID+WS+GC+ EL G+PLFSG
Sbjct: 185 DFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244
Query: 316 KNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD 375
+ +DQ+ +II+++G P + + ++ + K+ D RK G+ L
Sbjct: 245 ETSIDQLVRIIQIMGTP------TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLA 298
Query: 376 TILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ ++L Y+P RI+P + H FF
Sbjct: 299 I----------------------------DLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
+ L S IIH DLKP NI++ S + +KI+DFG + G + + Y+ +RYYR
Sbjct: 137 VGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+G I+ E+ G LF G + +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-------LTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 87 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 87 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K KPF + + E++LL+ +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMK 91
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 92 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 139
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 140 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 256 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 294
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 295 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-------LTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 87 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 85 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 132
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 133 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 188
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 249 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 287
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 288 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 85 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 132
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 133 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 188
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 249 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 287
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 288 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 103 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 150
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 151 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGYV 206
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 267 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 305
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 306 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY--IQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P P ++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKL 252
Query: 340 ASKTSKYFD-RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
Y + R Y +K P D + D H+
Sbjct: 253 QPTVRNYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 91 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 138
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 139 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 194
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 255 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 293
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 294 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 85 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 132
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 133 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 188
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 249 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 287
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 288 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 86 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 250 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 78
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 79 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 126
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 127 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 182
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 243 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 281
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 282 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 310
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 77
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 78 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 125
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 126 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 181
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 242 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 280
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 281 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 87 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L RY+ +G G+ G V A+D + VAIK K +PF NQ + E + +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ + I+ L FT + L +V EL+ NL +I+ H Q+
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY--IQSRYYR 280
C + L S IIH DLKP NI++ S +KI+DFG + G + + +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PEV+LG+ Y +D+WS+GCI+ E+ + LF G++ +DQ K+IE LG P +
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
T + + +R Y +K P D + D H+
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ +DL+ +ML D KRIS L+H +
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 86 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 250 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 100 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 147
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 148 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 203
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 264 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 302
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 303 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 82 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 99 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 146
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 147 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 202
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 263 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 301
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 302 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 92 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 139
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 140 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 256 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 294
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 295 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 92 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 139
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 140 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 256 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 294
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 295 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 62/338 (18%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ ++ + +
Sbjct: 85 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+ +R+
Sbjct: 137 YQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRW 192
Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P LL
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
S S Y L+ ++P + +G +
Sbjct: 253 KKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV---------- 287
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 288 ---------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 91 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 138
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 139 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 194
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 255 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 293
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 294 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 77 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 124
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 125 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 180
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 241 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 279
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 280 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 82 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 62/338 (18%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ ++ + +
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+ +R+
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRW 187
Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P LL
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
S S Y L+ ++P + +G +
Sbjct: 248 KKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV---------- 282
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 ---------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 76 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 240 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 82 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 161/340 (47%), Gaps = 66/340 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V ++D + ++A+K K +PF + + E++LL+ +
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 108
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 109 HENV-----IGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 156
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 157 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 212
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y++ +D+WS+GCI+ EL TG LF G + ++Q+ +I+ + G PP
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXX 393
++ S+ + R NS ++P D +G +
Sbjct: 273 ASVI---SRMPSHEARNYINSL----------PQMPKRNFADVFIGANPLAV-------- 311
Query: 394 XHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ + L H +F ++
Sbjct: 312 -----------DLLEKMLVLDTDKRITASEALAHPYFSQY 340
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 77 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 124
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 125 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 180
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 241 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 279
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 280 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 103 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTDDHV 150
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 151 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 206
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 267 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 305
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 306 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 76 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CAKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 240 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 54/338 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKA 166
D YEI +G G++G V A QVAIK I N + A+ E+++L+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 167 DIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + I++ + + +V +L+ +L+ +I ++ ++L + F QL L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGL 171
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQYIQSRY 278
++ S + +IH DLKP N+L+ + +KI DFG S + +Y+ +R+
Sbjct: 172 KYMHSAQ--VIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 279 YRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L + Y AID+WS+GCI E+ LF GKN V Q+ I+ VLG P ++
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 338 H--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
GA + Y L V ++ PG+ R
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETV------YPGADR---------------------- 319
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
+ L+ RML ++P RIS LRH F K+
Sbjct: 320 ------QALSLLGRMLRFEPSARISAAAALRHPFLAKY 351
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 86 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 250 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 99 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 146
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 147 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 202
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 263 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 301
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 302 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 76 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 240 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 100 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 147
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 148 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 203
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 264 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 302
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 303 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 54/338 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKA 166
D YEI +G G++G V A QVAIK I N + A+ E+++L+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 167 DIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + I++ + + +V +L+ +L+ +I ++ ++L + F QL L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGL 172
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------LYQYIQSRY 278
++ S + +IH DLKP N+L+ + +KI DFG + + + + +Y+ +R+
Sbjct: 173 KYMHSAQ--VIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 279 YRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L + Y AID+WS+GCI E+ LF GKN V Q+ I+ VLG P ++
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 338 H--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
GA + Y L V ++ PG+ R
Sbjct: 289 QAVGAERVRAYIQSLPPRQPVPWETV------YPGADR---------------------- 320
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
+ L+ RML ++P RIS LRH F K+
Sbjct: 321 ------QALSLLGRMLRFEPSARISAAAALRHPFLAKY 352
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 53/331 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
+YE +G+G++G+V KA D + + VA+K ++ + P ++ V + LE
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
++ + V + L LVFE + +L + GV K QL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
L FL S ++H DLKP+NIL+ S IK+ DFG + L + + +YR+
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
PEVLL Y +D+WS+GCI E+ +PLF G ++VDQ+ KI++V+G+P G
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP------GEE 241
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI--LGVDXXXXXXXXXXXXXHSLAD 399
+ L + K P K + I LG
Sbjct: 242 DWPR--------DVALPRQAFHSKSAQPIEKFVTDIDELG-------------------- 273
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
KDL+L+ LT++P KRIS + L H +F
Sbjct: 274 ----KDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 89
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 90 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 137
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + Y+
Sbjct: 138 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 193
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 254 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 292
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 293 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 321
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
+YE +G+G++G+V KA D + + VA+K ++ + P ++ V + LE
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
++ + V + L LVFE + +L + GV K QL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
L FL S ++H DLKP+NIL+ S + IK+ DFG + L + + +YR+
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
PEVLL Y +D+WS+GCI E+ +PLF G ++VDQ+ KI++V+G+P G
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP------GEE 241
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI--LGVDXXXXXXXXXXXXXHSLAD 399
+ L + K P K + I LG
Sbjct: 242 DWPR--------DVALPRQAFHSKSAQPIEKFVTDIDELG-------------------- 273
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
KDL+L+ LT++P KRIS + L H +F
Sbjct: 274 ----KDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 62/338 (18%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ ++ + +
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
Q+ L ++ S + IIH DLKP N L + +KI+D+G + H + Y+ +R+
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDYGLARHTDDEMTGYVATRW 187
Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P LL
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
S S Y L+ ++P + +G +
Sbjct: 248 KKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV---------- 282
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 ---------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
+YE +G+G++G+V KA D + + VA+K ++ + P ++ V + LE
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
++ + V + L LVFE + +L + GV K QL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
L FL S ++H DLKP+NIL+ S + IK+ DFG + L + + +YR+
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
PEVLL Y +D+WS+GCI E+ +PLF G ++VDQ+ KI++V+G+P G
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP------GEE 241
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI--LGVDXXXXXXXXXXXXXHSLAD 399
+ L + K P K + I LG
Sbjct: 242 DWPR--------DVALPRQAFHSKSAQPIEKFVTDIDELG-------------------- 273
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
KDL+L+ LT++P KRIS + L H +F
Sbjct: 274 ----KDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 54/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKAD 167
RYE +G G++G V KA D VA+K ++ N + L + + EV LL ++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 168 IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
H + + T + + LVFE + +L + G+ K +Q
Sbjct: 65 -HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
L FL + I+H DLKPENIL+ S +K+ DFG + L+ + + +YR+
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
PEVLL Y +DMWS+GCI E+ +PLF G +E DQ+ KI +++G+PP
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE------- 232
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYM 401
D + + + + R R S+ M
Sbjct: 233 ------DDWPRDVSLPRGAFPPRGPR-------------------------PVQSVVPEM 261
Query: 402 K--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
+ L+L MLT++P KRIS L+H + K
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + ++
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + ++
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 76 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + ++
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 240 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+ FG + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILGFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+D G + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDAGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + +
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGXV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+D G + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDRGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 146/333 (43%), Gaps = 54/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKAD 167
RYE +G G++G V KA D VA+K ++ N + L + + EV LL ++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 168 IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
H + + T + + LVFE + +L + G+ K +Q
Sbjct: 65 -HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
L FL + I+H DLKPENIL+ S +K+ DFG + L + + +YR+
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALAPVVVTLWYRA 179
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
PEVLL Y +DMWS+GCI E+ +PLF G +E DQ+ KI +++G+PP
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE------- 232
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYM 401
D + + + + R R S+ M
Sbjct: 233 ------DDWPRDVSLPRGAFPPRGPR-------------------------PVQSVVPEM 261
Query: 402 K--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
+ L+L MLT++P KRIS L+H + K
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+D G + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDGGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 100 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 147
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DFG + H + +
Sbjct: 148 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGXV 203
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 264 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 302
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 303 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 148/338 (43%), Gaps = 64/338 (18%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKAD 167
RYE +G G++G V KA D VA+K ++ N + L + + EV LL ++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 168 IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
H + + T + + LVFE + +L + G+ K +Q
Sbjct: 65 -HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-------IQS 276
L FL + I+H DLKPENIL+ S +K+ DFG + +Y Y + +
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLA-----RIYSYQMALDPVVVT 174
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
+YR+PEVLL Y +DMWS+GCI E+ +PLF G +E DQ+ KI +++G+PP
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE-- 232
Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHS 396
D + + + + R R S
Sbjct: 233 -----------DDWPRDVSLPRGAFPPRGPR-------------------------PVQS 256
Query: 397 LADYMK--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
+ M+ L+L MLT++P KRIS L+H + K
Sbjct: 257 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 50/328 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+++Y +G+G++G V KA ++ E I++ K + + E+ +L+++ +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+I VKL K L LVFE L +L L+ + G+ K F QL +A
Sbjct: 61 NI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIA 114
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
+ + ++H DLKP+N+L+ + +KI DFG + G + +Y I + +YR+P+
Sbjct: 115 YCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
VL+G Y ID+WS+GCI E+ G PLF G +E DQ+ +I +LG P ++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
KY D ++ T E LP L G+D
Sbjct: 231 LPKY-----DPNF-------TVYEPLPWESFLK---GLDESGI----------------- 258
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ +ML DP +RI+ L H +F
Sbjct: 259 --DLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
+RY+ + +G G++G V AFD + +VA+K K +PF + + E++LL+ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
++ + L FT N + LV L+ +L N+++ LT
Sbjct: 80 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
Q Q+ L ++ S + IIH DLKP N L + +KI+DF + H + Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFYLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+R+YR+PE++L + Y+ +D+WS+GCI+ EL TG LF G + +DQ+ I+ ++G P
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
LL S S Y L+ ++P + +G +
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ +ML D KRI+ L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 28/236 (11%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-----NKKPFLNQAQI-EVQLLEKIN 164
RYE LG+G F V KA D VAIK IK K +N+ + E++LL++++
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLT----KKFAQQ 220
+I + L F K+++ LVF+ + +L +I++ SL LT K +
Sbjct: 71 HPNI-----IGLLDAFGHKSNISLVFDFMETDLEVIIKDN-----SLVLTPSHIKAYMLM 120
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSR 277
L +L + I+H DLKP N+LL + +K+ DFG + G Y + +R
Sbjct: 121 TLQGLEYLH--QHWILHRDLKPNNLLL--DENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
+YR+PE+L G Y + +DMW++GCIL EL P G +++DQ+T+I E LG P
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 50/328 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+++Y +G+G++G V KA ++ E I++ K + + E+ +L+++ +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+I VKL K L LVFE L +L L+ + G+ K F QL +A
Sbjct: 61 NI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIA 114
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
+ + ++H DLKP+N+L+ + +KI DFG + G + +Y + + +YR+P+
Sbjct: 115 YCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
VL+G Y ID+WS+GCI E+ G PLF G +E DQ+ +I +LG P ++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
KY D ++ T E LP L G+D
Sbjct: 231 LPKY-----DPNF-------TVYEPLPWESFLK---GLDESGI----------------- 258
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ +ML DP +RI+ L H +F
Sbjct: 259 --DLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 62/330 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQIEVQLLEKINKADIHSRY 172
+G G++G V A+D + +VA+K K +PF + E++LL+ + ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENV---- 89
Query: 173 IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ L FT + + LV L+ +L N++++ +S + QL L
Sbjct: 90 -IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRGLK 145
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
++ S IIH DLKP N+ + + S ++I+DFG + + + Y+ +R+YR+PE++L
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRAPEIML 201
Query: 287 G-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
+ Y+ +D+WS+GCI+ EL G+ LF G + +DQ+ +I+EV+G P +L +K S
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL---AKISS 258
Query: 346 YFDRLSDNSYVLKKSTDTRKERLP--GSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKF 403
R T + LP K L +I + LA
Sbjct: 259 EHAR-------------TYIQSLPPMPQKDLSSIF-------------RGANPLA----- 287
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ RML D +R+S L H +F ++
Sbjct: 288 IDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 50/328 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+++Y +G+G++G V KA ++ E I++ K + + E+ +L+++ +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+I VKL K L LVFE L +L L+ + G+ K F QL +A
Sbjct: 61 NI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIA 114
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
+ + ++H DLKP+N+L+ + +KI DFG + G + +Y + + +YR+P+
Sbjct: 115 YCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
VL+G Y ID+WS+GCI E+ G PLF G +E DQ+ +I +LG P ++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
KY D ++ T E LP L G+D
Sbjct: 231 LPKY-----DPNF-------TVYEPLPWESFLK---GLDESGI----------------- 258
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ +ML DP +RI+ L H +F
Sbjct: 259 --DLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 143/342 (41%), Gaps = 57/342 (16%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI------EVQ 158
G RYE +G G++G V KA D VA+K ++ + EV
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 159 LLEKINKADIHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLT 214
LL ++ + H + + T + + LVFE + +L + G+
Sbjct: 64 LLRRLEAFE-HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQ 272
K +Q L FL + I+H DLKPENIL+ S +K+ DFG + L
Sbjct: 123 KDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALTP 178
Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
+ + +YR+PEVLL Y +DMWS+GCI E+ +PLF G +E DQ+ KI +++G+P
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXX 392
P D + + + + R R
Sbjct: 239 PE-------------DDWPRDVSLPRGAFPPRGPR------------------------- 260
Query: 393 XXHSLADYMK--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
S+ M+ L+L MLT++P KRIS L+H + K
Sbjct: 261 PVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 57/330 (17%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
Y T +G G++G V A D +VAIK K +PF ++ + E + +
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLN--LTKKFAQ--------QL 221
++ L FT + L N Y+ F L + KF++ Q+
Sbjct: 84 NVIGLLDVFTPASSL--------RNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM 135
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS 281
L ++ S ++H DLKP N L + +KI+DFG + H + Y+ +R+YR+
Sbjct: 136 LKGLKYIHSA--GVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYRA 191
Query: 282 PEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
PEV+L + Y+ +D+WS+GCI+ E+ TG+ LF GK+ +DQ+T+I++V G+P
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP-------- 243
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADY 400
+++ +L+D K+ + + LP + R D
Sbjct: 244 --GTEFVQKLND------KAAKSYIQSLPQTPRKDFTQLFPRASPQAA------------ 283
Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ +ML D KR++ L H FF
Sbjct: 284 ----DLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 150/328 (45%), Gaps = 53/328 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
Y T +G G++G V A D +VAIK K +PF ++ + E + +
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 172 YIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
++ L FT + L LV + +L ++ G+ + K Q+
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLK 155
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
L ++ S ++H DLKP N L + +KI+DFG + H + Y+ +R+YR+PE
Sbjct: 156 GLKYIHSA--GVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPE 211
Query: 284 VLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
V+L + Y+ +D+WS+GCI+ E+ TG+ LF GK+ +DQ+T+I++V G+P
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP---------- 261
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
+++ +L+D K+ + + LP + R D
Sbjct: 262 GTEFVQKLND------KAAKSYIQSLPQTPRKDFTQLFPRASPQAA-------------- 301
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ +ML D KR++ L H FF
Sbjct: 302 --DLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 162/336 (48%), Gaps = 56/336 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIH 169
RY + +G+G++G V A+D+ K +VAIK I PF +Q + L E KI A H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRH 82
Query: 170 SRYI----VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 139
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + S +KI DFG + H G L +Y+ +R+
Sbjct: 140 KYIHSA--NVLHRDLKPSNLLLNT--TSDLKICDFGLARVADPDHDHTG-FLTEYVATRW 194
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ L +Y+L + K ++P ++
Sbjct: 255 NCGIN-------LKARNYLL---SLPHKNKVPWNRLFPN--------------------- 283
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
AD K DL+ +MLT++P KRI L H + ++
Sbjct: 284 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 62/330 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQIEVQLLEKINKADIHSRY 172
+G G++G V A+D + +VA+K K +PF + E++LL+ + ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENV---- 89
Query: 173 IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ L FT + + LV L+ +L N+++ +S + QL L
Sbjct: 90 -IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLLRGLK 145
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
++ S IIH DLKP N+ + + S ++I+DFG + + + Y+ +R+YR+PE++L
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRAPEIML 201
Query: 287 G-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
+ Y+ +D+WS+GCI+ EL G+ LF G + +DQ+ +I+EV+G P +L +K S
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL---AKISS 258
Query: 346 YFDRLSDNSYVLKKSTDTRKERLP--GSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKF 403
R T + LP K L +I + LA
Sbjct: 259 EHAR-------------TYIQSLPPMPQKDLSSIF-------------RGANPLA----- 287
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ RML D +R+S L H +F ++
Sbjct: 288 IDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 100
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + LV L+ +LY L++ + +S + F Q+ L
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGL 157
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 158 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 212
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 267
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 268 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 301
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 302 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKIXDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 248 --SQEDLNXIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 51/332 (15%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEK 162
+ +++Y+ +G+G++G V KA D + + VA+K I+ + + A E+ LL+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLK- 74
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
++H IV L + L LVFE + +L ++ + N G+ + K + QL
Sbjct: 75 ----ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVL-DENKTGLQDSQIKIYLYQLL 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYY 279
+A + I+H DLKP+N+L+ S A+K+ DFG + G + Y + + +Y
Sbjct: 130 RGVAHCH--QHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 280 RSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
R+P+VL+G Y ++D+WS+GCI E+ TG+PLF G + DQ+ KI +LG P
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP------ 239
Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
+ + ++ + + K+ T E+ P S +
Sbjct: 240 ----NPREWPQVQELP-LWKQRTFQVFEKKPWSSIIPGFC-------------------- 274
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ DL+ ML +DP KRIS + + H +F
Sbjct: 275 --QEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 51/332 (15%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEK 162
+ +++Y+ +G+G++G V KA D + + VA+K I+ + + A E+ LL+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLK- 74
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
++H IV L + L LVFE + +L ++ + N G+ + K + QL
Sbjct: 75 ----ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVL-DENKTGLQDSQIKIYLYQLL 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYY 279
+A + I+H DLKP+N+L+ S A+K+ DFG + G + Y + + +Y
Sbjct: 130 RGVAHCH--QHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 280 RSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
R+P+VL+G Y ++D+WS+GCI E+ TG+PLF G + DQ+ KI +LG P
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP------ 239
Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
+ + ++ + + K+ T E+ P S +
Sbjct: 240 ----NPREWPQVQELP-LWKQRTFQVFEKKPWSSIIPGFC-------------------- 274
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
+ DL+ ML +DP KRIS + + H +F
Sbjct: 275 --QEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 248 --SQEDLNXIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 161/336 (47%), Gaps = 56/336 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIH 169
RY + +G+G++G V A+D+ K +VAIK I PF +Q + L E KI A H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRH 82
Query: 170 SRYI----VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 139
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 140 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 194
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 249
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 250 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 283
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
AD K DL+ +MLT++P KRI L H + ++
Sbjct: 284 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 248 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 145
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 146 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 200
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 255
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L K ++P ++
Sbjct: 256 --SQEDLNCIINLKARNYLLSLP---HKNKVPWNRLFPN--------------------- 289
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 290 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L K ++P ++
Sbjct: 248 --SQEDLNCIINLKARNYLLSLP---HKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 127/229 (55%), Gaps = 17/229 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINK 165
+++YE L+G+GS+G V+K + + VAIK + K A E++LL+++
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
++ + V K K LVFE + + + + + +G+ + +K+ Q+ +
Sbjct: 84 ENLVNLLEVCKK-----KKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGI 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSP 282
F S +IIH D+KPENIL+ + +K+ DFG + G+ + +R+YR+P
Sbjct: 138 GFCHSH--NIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 283 EVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
E+L+G + Y A+D+W++GC++ E+ GEPLF G +++DQ+ I+ LG
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG 242
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 152/335 (45%), Gaps = 60/335 (17%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY +G+G++G V A+DH K +VAIK I PF +Q E+Q+L +
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS---PFEHQTYCQRTLREIQILLRFRH 100
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
++ + + +V +L+ +LY L+++ +S + F Q+ L
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRGL 157
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+L+ + +KI DFG + H G L + + +R+
Sbjct: 158 KYIHS--ANVLHRDLKPSNLLINT--TCDLKICDFGLARIADPEHDHTG-FLTEXVATRW 212
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 338 HGA--SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
+ K Y L + V + P S
Sbjct: 273 NCIINMKARNYLQSLPSKTKV------AWAKLFPKSDS---------------------- 304
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
K DL+ RMLT++P KRI+ L H +
Sbjct: 305 ------KALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 248 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 62/330 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQIEVQLLEKINKADIHSRY 172
+G G++G V A+D + +VA+K K +PF + E++LL+ + ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENV---- 81
Query: 173 IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ L FT + + LV L+ +L N+++ +S + QL L
Sbjct: 82 -IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLLRGLK 137
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
++ S IIH DLKP N+ + + ++I+DFG + + + Y+ +R+YR+PE++L
Sbjct: 138 YIHSA--GIIHRDLKPSNVAVN--EDCELRILDFGLARQADEEMTGYVATRWYRAPEIML 193
Query: 287 G-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
+ Y+ +D+WS+GCI+ EL G+ LF G + +DQ+ +I+EV+G P +L +K S
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL---AKISS 250
Query: 346 YFDRLSDNSYVLKKSTDTRKERLP--GSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKF 403
R T + LP K L +I + LA
Sbjct: 251 EHAR-------------TYIQSLPPMPQKDLSSIF-------------RGANPLA----- 279
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
DL+ RML D +R+S L H +F ++
Sbjct: 280 IDLLGRMLVLDSDQRVSAAEALAHAYFSQY 309
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 100
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 157
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 158 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 212
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 267
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 268 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 301
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 302 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 78
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 135
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 136 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 190
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 245
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 246 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 279
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 280 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 82
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 139
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 140 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 194
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 249
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 250 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 283
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 284 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 85
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 142
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 143 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 197
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 252
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 253 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 286
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 287 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 86
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 143
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 144 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 198
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 253
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 254 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 287
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 288 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 77
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 134
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 135 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 189
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 244
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 245 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 278
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 279 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 78
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 135
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 136 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 190
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 245
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ L +Y+L + K ++P ++
Sbjct: 246 --EQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 279
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 280 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
F DRY+ +LGKGSFG+V+ D + A+K+I + K ++ + EVQLL+++
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
+ +I +KL F K + LV E+ + L++ +I F V + +Q+
Sbjct: 107 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 158
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
+ ++ + I+H DLKPEN+LL S + A I+IIDFG S H + + I + Y
Sbjct: 159 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 216
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
Y +PEVL G YD D+WS G IL L +G P F+G NE D + K+
Sbjct: 217 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
F DRY+ +LGKGSFG+V+ D + A+K+I + K ++ + EVQLL+++
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
+ +I +KL F K + LV E+ + L++ +I F V + +Q+
Sbjct: 108 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 159
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
+ ++ + I+H DLKPEN+LL S + A I+IIDFG S H + + I + Y
Sbjct: 160 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 217
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
Y +PEVL G YD D+WS G IL L +G P F+G NE D + K+
Sbjct: 218 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAI+ I PF +Q E+++L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
F DRY+ +LGKGSFG+V+ D + A+K+I + K ++ + EVQLL+++
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
+ +I +KL F K + LV E+ + L++ +I F V + +Q+
Sbjct: 84 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 135
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
+ ++ + I+H DLKPEN+LL S + A I+IIDFG S H + + I + Y
Sbjct: 136 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
Y +PEVL G YD D+WS G IL L +G P F+G NE D + K+
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKI 163
F +RY I +LGKGSFG+V+K D + + A+K+I NK N+ EV+LL+K+
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ +I + I++ F L EL +I+ F S + + +Q+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFG-SSCHVGQT-LYQYIQSRYY 279
+ ++ +I+H DLKPENILL S ++ IKIIDFG S+C T + I + YY
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+PEVL G YD D+WS G IL L +G P F GKNE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
F DRY+ +LGKGSFG+V+ D + A+K+I + K ++ + EVQLL+++
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
+ +I +KL F K + LV E+ + L++ +I F V + +Q+
Sbjct: 90 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 141
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
+ ++ + I+H DLKPEN+LL S + A I+IIDFG S H + + I + Y
Sbjct: 142 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 199
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
Y +PEVL G YD D+WS G IL L +G P F+G NE D + K+
Sbjct: 200 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKI 163
F +RY I +LGKGSFG+V+K D + + A+K+I NK N+ EV+LL+K+
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ +I + I++ F L EL +I+ F S + + +Q+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFG-SSCHVGQT-LYQYIQSRYY 279
+ ++ +I+H DLKPENILL S ++ IKIIDFG S+C T + I + YY
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+PEVL G YD D+WS G IL L +G P F GKNE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKI 163
F +RY I +LGKGSFG+V+K D + + A+K+I NK N+ EV+LL+K+
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ +I + I++ F L EL +I+ F S + + +Q+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFG-SSCHVGQT-LYQYIQSRYY 279
+ ++ +I+H DLKPENILL S ++ IKIIDFG S+C T + I + YY
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+PEVL G YD D+WS G IL L +G P F GKNE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L + + +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLXEXVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
RY + +G+G++G V A+D+ K +VAIK I PF +Q E+++L +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 85
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I + + +V +L+ +LY L++ + +S + F Q+ L
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 142
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
++ S +++H DLKP N+LL + +KI DFG + H G L + + +R+
Sbjct: 143 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLXEXVATRW 197
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
YR+PE++L Y +ID+WS+GCIL E+ + P+F GK+ +DQ+ I+ +LG P
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 252
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
+ + L +Y+L + K ++P ++
Sbjct: 253 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 286
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
AD K DL+ +MLT++P KRI L H +
Sbjct: 287 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 19/231 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKKPFLNQAQI-EVQLLEKIN 164
+++YE +G+GS+G V K + + VAIK + P + + + E+++L+++
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCC 223
++ V L F K L LVFE + L+ L R GV +L K Q
Sbjct: 61 HPNL-----VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQ 113
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLY--QYIQSRYYR 280
A+ F + + IH D+KPENIL+ K S IK+ DFG + G + Y + +R+YR
Sbjct: 114 AVNFCH--KHNCIHRDVKPENILIT--KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR 169
Query: 281 SPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
SPE+L+G Y +D+W++GC+ EL +G PL+ GK++VDQ+ I + LG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
F DRY+ +LGKGSFG+V+ D + A+K+I + K ++ + EVQLL+++
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ +I Y + KG+F + EL +I F V + +Q+
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD----EIISRKRFSEVD---AARIIRQVL 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRYY 279
+ + + I+H DLKPEN+LL S + A I+IIDFG S H + I + YY
Sbjct: 137 SGITYXHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYY 194
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+PEVL G YD D+WS G IL L +G P F+G NE D + K+
Sbjct: 195 IAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 55/350 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L +YE+ LGKG++G V K+ D VA+K I + AQ + + + +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 169 HSRYIVKLKGHFTWKNH--LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H IV L N + LVF+ + +L+ +IR V + QL +
Sbjct: 68 HEN-IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH---KQYVVYQLIKVIK 123
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------------CHVGQT--- 269
+L S L +H D+KP NILL + +K+ DFG S + +
Sbjct: 124 YLHSGGL--LHRDMKPSNILLNA--ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 270 -------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
L Y+ +R+YR+PE+LLG Y IDMWSLGCIL E+ G+P+F G + ++Q
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRK--ERLPGSKRLDTILG 379
+ +II V+ P + S S + + ++ LK+ + R+ +R +K + +L
Sbjct: 240 LERIIGVIDFPSNEDVE--SIQSPFAKTMIES---LKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
++ DL+ ++L ++P KRIS + L+H F
Sbjct: 295 INPKADCNEEAL-------------DLLDKLLQFNPNKRISANDALKHPF 331
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 30/235 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ-----AQIEVQLLEKINKADIHSRY 172
+G G++G V A D +VAIK K +PF ++ A E++LL+ H R+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLK-------HMRH 83
Query: 173 --IVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
++ L FT L LV + +L L+++ + Q+
Sbjct: 84 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF---LVYQMLKG 140
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
L ++ + IIH DLKP N L + +KI+DFG + + + +R+YR+PEV
Sbjct: 141 LRYIHAA--GIIHRDLKPGN--LAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEV 196
Query: 285 LLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
+L + Y +D+WS+GCI+ E+ TG+ LF G + +DQ+ +I++V G PP +
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 18/232 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
+ +YE +G+G++G V KA + E VA+K ++ + + + A E+ LL+++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I V+L L LVFE +L + N + + K F QL L
Sbjct: 61 KNI-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGL 114
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSP 282
F S +++H DLKP+N+L+ + +K+ +FG + G + Y + + +YR P
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLIN--RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 283 EVLLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKNEVDQMTKIIEVLGMP 332
+VL G Y +IDMWS GCI EL + G PLF G + DQ+ +I +LG P
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 144/330 (43%), Gaps = 69/330 (20%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
LG+G++ V K VA+K I+ +++ A EV LL+ + A+I V
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VT 64
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRN----TNFHGVSLNLTKKFAQQLCCALAFLSSP 231
L + L LVFE L +L + + N H V L F QL LA+
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL-----FLFQLLRGLAYCHRQ 119
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG- 287
+ ++H DLKP+N+L+ +R +K+ DFG + +T + + +YR P++LLG
Sbjct: 120 K--VLHRDLKPQNLLIN--ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PGYLLHGASK 342
Y IDMW +GCI E+ TG PLF G +Q+ I +LG P PG L + K
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPG-SKRLDTILGVDXXXXXXXXXXXXXHSLADYM 401
T Y R E L + RLD+
Sbjct: 236 TYNY--------------PKYRAEALLSHAPRLDS------------------------- 256
Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFFL 431
DL+ ++L ++ + RIS + ++H FFL
Sbjct: 257 DGADLLTKLLQFEGRNRISAEDAMKHPFFL 286
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 42/253 (16%)
Query: 96 ENYDY---IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
E +DY +++ G + D Y++ LG+G + +V +A + +V +KI+K K N+
Sbjct: 22 EYWDYASHVVEWGNQ--DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NK 77
Query: 153 AQIEVQLLEK-------INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTN 205
+ E+++LE I ADI + + LVFE + NT+
Sbjct: 78 IKREIKILENLRGGPNIITLADIVKDPVSRTP---------ALVFEH--------VNNTD 120
Query: 206 FHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
F + LT + + ++ AL + S + I+H D+KP N+++ R +++ID+G
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRK-LRLIDWG 177
Query: 262 SS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKN 317
+ H GQ + SRY++ PE+L+ YD ++DMWSLGC+L + EP F G +
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 318 EVDQMTKIIEVLG 330
DQ+ +I +VLG
Sbjct: 238 NYDQLVRIAKVLG 250
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
+ +YE +G+G++G V KA + E VA+K ++ + + + A E+ LL+++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+I V+L L LVFE +L + N + + K F QL L
Sbjct: 61 KNI-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGL 114
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSP 282
F S +++H DLKP+N+L+ + +K+ DFG + G + Y + + +YR P
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLIN--RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 283 EVLLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKNEVDQMTKIIEVLGMP 332
+VL G Y +IDMWS GCI EL + PLF G + DQ+ +I +LG P
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 64/340 (18%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
+++ +LLG+G++G V A VAIK I+ +K F + E+++L+ +I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
+ + ++ F N + ++ EL+ +L+ +I +S + + F Q A+ L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQT--LYQYIQS 276
++IH DLKP N+L+ S +K+ DFG +S GQ + +Y+ +
Sbjct: 130 GS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 277 RYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
R+YR+PEV+L Y A+D+WS GCIL EL P+F G++ Q+ I ++G P
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP--- 242
Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRK-----ERLPGSKRLDTILGVDXXXXXXXXX 390
SDN +S R+ P + V+
Sbjct: 243 --------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP-------- 280
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
K DL+ RML +DP KRI+ L H +
Sbjct: 281 -----------KGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 64/340 (18%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
+++ +LLG+G++G V A VAIK I+ +K F + E+++L+ +I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
+ + ++ F N + ++ EL+ +L+ +I +S + + F Q A+ L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQT--LYQYIQS 276
++IH DLKP N+L+ S +K+ DFG +S GQ + +++ +
Sbjct: 130 GS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 277 RYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
R+YR+PEV+L Y A+D+WS GCIL EL P+F G++ Q+ I ++G P
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP--- 242
Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRK-----ERLPGSKRLDTILGVDXXXXXXXXX 390
SDN +S R+ P + V+
Sbjct: 243 --------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP-------- 280
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
K DL+ RML +DP KRI+ L H +
Sbjct: 281 -----------KGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 64/340 (18%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
+++ +LLG+G++G V A VAIK I+ +K F + E+++L+ +I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
+ + ++ F N + ++ EL+ +L+ +I +S + + F Q A+ L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQT--LYQYIQS 276
++IH DLKP N+L+ S +K+ DFG +S GQ + + + +
Sbjct: 130 GS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 277 RYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
R+YR+PEV+L Y A+D+WS GCIL EL P+F G++ Q+ I ++G P
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP--- 242
Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRK-----ERLPGSKRLDTILGVDXXXXXXXXX 390
SDN +S R+ P + V+
Sbjct: 243 --------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP-------- 280
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
K DL+ RML +DP KRI+ L H +
Sbjct: 281 -----------KGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
L ++I LG GSFG+V A+K++K K+ + Q+E E++ + +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+I+++ G F + ++ + + L++L+R + + K +A ++C AL +
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEY 121
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S + II+ DLKPENILL K IKI DFG + +V Y + Y +PEV+
Sbjct: 122 LHSKD--IIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVST 177
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGY 335
PY+ +ID WS G ++ E+ G F N + KI+ L PP +
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFF 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 65
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 122
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG SCH + + Y PE+
Sbjct: 123 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAIKII +K P LN + E+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 69 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 119
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 120 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAIKII +K P LN + E+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 69 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 119
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 120 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAIKII +K P LN + E+++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 67
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 68 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 118
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 119 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAIKII +K P LN + E+++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 74
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 75 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 125
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 126 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAIKII +K P LN + E+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 69 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 119
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 120 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK + +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 158/385 (41%), Gaps = 101/385 (26%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAI-KIIKNKKPFLNQAQI--EVQLLEKINKA 166
DRYEI L+G GS+G V +A+D EK VAI KI++ + ++ +I E+ +L ++N
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ + + + L +V E+ + L R T + L++ K L +
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHI-KTLLYNLLVGVK 170
Query: 227 FLSSPELSIIHCDLKPENILL----------------------------CSPKRSAIKII 258
++ S I+H DLKP N L+ SP+ + ++
Sbjct: 171 YVHS--AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPE-VLLGIPYDLAIDMWSLGCILVEL----------H 307
F + ++ + L ++ +R+YR+PE +LL Y AID+WS+GCI EL H
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288
Query: 308 TGE-PLFSG--------------------KNEVDQMTKIIEVLGMPPGYLLHGASKT-SK 345
PLF G + DQ+ I +LG P + K +K
Sbjct: 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK 348
Query: 346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKD 405
+ R+ + ++ TD ER P S AD +
Sbjct: 349 RYIRI----FPKREGTDL-AERFPASS-------------------------ADAIH--- 375
Query: 406 LILRMLTYDPKKRISPTNVLRHEFF 430
L+ RML ++P KRI+ L H FF
Sbjct: 376 LLKRMLVFNPNKRITINECLAHPFF 400
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 22/261 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
+EI LG G+FG+V KA + E A K+I+ K ++ ++E ++E A
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHP 76
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
YIVKL G + L ++ E + I G++ + +Q+ AL FL S
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL-- 286
IIH DLK N+L+ I++ DFG S +TL + +I + Y+ +PEV++
Sbjct: 137 R--IIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 287 ---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
PYD D+WSLG L+E+ EP +E++ M ++++ P LL + +
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 344 SKYFDRLSDNSYVLKKSTDTR 364
++ D L L K+ +TR
Sbjct: 250 VEFRDFL---KIALDKNPETR 267
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E +G GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + ++++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 22/261 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
+EI LG G+FG+V KA + E A K+I+ K ++ ++E ++E A
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHP 68
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
YIVKL G + L ++ E + I G++ + +Q+ AL FL S
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL-- 286
IIH DLK N+L+ I++ DFG S +TL + +I + Y+ +PEV++
Sbjct: 129 R--IIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 287 ---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
PYD D+WSLG L+E+ EP +E++ M ++++ P LL + +
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSDPPTLLTPSKWS 241
Query: 344 SKYFDRLSDNSYVLKKSTDTR 364
++ D L L K+ +TR
Sbjct: 242 VEFRDFL---KIALDKNPETR 259
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E +G GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + ++++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LGKG FG+V V+A C+ K K+ A E Q+LEK+N SR+
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-----SRF 245
Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+V L + K+ LCLV L L +++Y++ + G +A ++CC L
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLED 301
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
L I++ DLKPENILL I+I D G + HV GQT+ + + Y +PEV+
Sbjct: 302 LHRER--IVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG------KNEVDQMTKII 326
Y + D W+LGC+L E+ G+ F + EV+++ K +
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAI+II +K P LN + E+++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN-VETEIEI 193
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 194 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 244
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 245 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
D Y + LG G+ G+V AF+ + +VAI+II +K P LN + E+++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN-VETEIEI 207
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
L+K+N I+K+K F +++ +V EL+ L++ ++ N + L +
Sbjct: 208 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 258
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
Q+ A+ +L E IIH DLKPEN+LL S + IKI DFG S +G+T +
Sbjct: 259 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S + +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKK--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F D +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LGKG FG+V V+A C+ K K+ A E Q+LEK+N SR+
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-----SRF 245
Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+V L + K+ LCLV L L +++Y++ + G +A ++CC L
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLED 301
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
L I++ DLKPENILL I+I D G + HV GQT+ + + Y +PEV+
Sbjct: 302 LHRER--IVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG------KNEVDQMTKII 326
Y + D W+LGC+L E+ G+ F + EV+++ K +
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 177
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 178 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 233
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 91
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 149
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 150 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 205
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E +G GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 177
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 178 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILS 233
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 84
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 142
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 143 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 198
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 199 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E + +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ I++L G+F + L+ E +Y ++ + T + +L AL+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALS 127
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
+ S +IH D+KPEN+LL S +KI DFG S H + + Y PE++
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIV 251
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--------NKKPFLNQAQIEVQLLE 161
DRY+ LG G++G+V+ D + AIKIIK N L+ EV +L+
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----EVAVLK 59
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQ 219
+++ +I +KL F K + LV E+ L++ +I F V + K
Sbjct: 60 QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK--- 111
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQS 276
Q+ +L +I+H DLKPEN+LL S R A IKI+DFG S H VG + + + +
Sbjct: 112 QVLSGTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
YY +PEVL YD D+WS G IL L G P F G+ + + + ++
Sbjct: 170 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLK 432
K L+ MLTY+P KRIS L H + +K
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--------NKKPFLNQAQIEVQLLE 161
DRY+ LG G++G+V+ D + AIKIIK N L+ EV +L+
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----EVAVLK 76
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQ 219
+++ +I +KL F K + LV E+ L++ +I F V + K
Sbjct: 77 QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK--- 128
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQS 276
Q+ +L +I+H DLKPEN+LL S R A IKI+DFG S H VG + + + +
Sbjct: 129 QVLSGTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 186
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
YY +PEVL YD D+WS G IL L G P F G+ + + + ++
Sbjct: 187 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLK 432
K L+ MLTY+P KRIS L H + +K
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 85
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 143
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 144 LHS--LDLIYRDLKPENLLI--DEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 199
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 238
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 65
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 122
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 123 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM 178
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ K L +A +E QL ++ ++
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 81
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 138
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 139 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 250
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 66
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 123
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 124 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
K E D Y+ +LG G+F +V+ A D + VAIK I K + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
KI +I V L + HL L+ +L+S L++ I F+ + +
Sbjct: 71 HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
Q+ A+ +L +L I+H DLKPEN+L S + S I I DFG S G L +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
Y +PEVL PY A+D WS+G I L G P F +N+ +I++
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
+ ++VKL+ F ++L +V E + +L + R H + +A Q+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH------ARFYAAQIVL 152
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
+L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE
Sbjct: 153 TFEYLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
++L Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 68
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 125
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 63
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 120
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 121 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 232
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 90
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 147
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 148 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 126
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 127 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 61
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 118
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 119 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 56/336 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN-----------KKPFLNQAQI-EVQL 159
Y + + GS+G V D E VAIK + N FL + + E++L
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
L + +I + + + L LV EL+ +L +I + +S + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI-VISPQHIQYFMY 141
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLYQYIQ 275
+ L L E ++H DL P NILL + I I DF + +T Y+
Sbjct: 142 HILLGLHVLH--EAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANKT--HYVT 195
Query: 276 SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
R+YR+PE+++ + +DMWS GC++ E+ + LF G +Q+ KI+EV+G P
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP-- 253
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
K D + +S + +P + D
Sbjct: 254 ----------KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL--------- 294
Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
DLI +ML ++P++RIS LRH +F
Sbjct: 295 ----------DLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 126
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE
Sbjct: 127 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEX 182
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 56/336 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN-----------KKPFLNQAQI-EVQL 159
Y + + GS+G V D E VAIK + N FL + + E++L
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
L + +I + + + L LV EL+ +L +I + +S + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI-VISPQHIQYFMY 141
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLYQYIQ 275
+ L L E ++H DL P NILL + I I DF + +T Y+
Sbjct: 142 HILLGLHVLH--EAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANKT--HYVT 195
Query: 276 SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
R+YR+PE+++ + +DMWS GC++ E+ + LF G +Q+ KI+EV+G P
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP-- 253
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
K D + +S + +P + D
Sbjct: 254 ----------KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL--------- 294
Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
DLI +ML ++P++RIS LRH +F
Sbjct: 295 ----------DLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTELCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 91
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E + +L R F +A Q+
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 148
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 149 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 204
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R + + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++ KL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++ KL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 158 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 90
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 147
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 148 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM 203
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 126
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 127 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 182
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + +IE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ ++ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIV 251
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 65
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 122
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 123 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 178
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ I++L G+F + L+ E +Y ++ + T + +L AL+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALS 127
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
+ S +IH D+KPEN+LL S +KI DFG S H + + Y PE++
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E ++ +L R F +A Q+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E ++ +L R F +A Q+
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 176
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 177 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 232
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E + +L R F +A Q+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 156
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E + +L R F +A Q+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E + +L R F +A Q+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 93
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E ++ +L R F +A Q+
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 150
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 151 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 206
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 246
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E ++ +L R F +A Q+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 169/373 (45%), Gaps = 68/373 (18%)
Query: 94 DDENYDYIIK---HGEKFLDRYEIDTL-LGKGSFGQVVKAFDHEEKCQV--AIKIIKNKK 147
D +YD+ +K E+ D +E + +G+G++G V KA + K A+K I+
Sbjct: 1 DKMDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG 60
Query: 148 PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
++ + E+ LL ++ ++ S V L H K + L+F+ ++L+++I+ FH
Sbjct: 61 ISMSACR-EIALLRELKHPNVISLQKVFL-SHADRK--VWLLFDYAEHDLWHIIK---FH 113
Query: 208 GVS----------LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAI 255
S + K Q+ + +L + ++H DLKP NIL+ P+R +
Sbjct: 114 RASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRV 171
Query: 256 KIIDFG------SSCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHT 308
KI D G S L + + +YR+PE+LLG Y AID+W++GCI EL T
Sbjct: 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
Query: 309 GEPLFSGKNEV---------DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKK 359
EP+F + E DQ+ +I V+G P A K + ++ ++S ++K
Sbjct: 232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP-------ADKDWEDIKKMPEHSTLMK- 283
Query: 360 STDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRI 419
D R+ + + H + K L+ ++LT DP KRI
Sbjct: 284 --DFRRNTYTNCSLIKYM---------------EKHKVKPDSKAFHLLQKLLTMDPIKRI 326
Query: 420 SPTNVLRHEFFLK 432
+ ++ +FL+
Sbjct: 327 TSEQAMQDPYFLE 339
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 14/216 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
++GKGSFG+V+ A E+ A+K+++ K + + + + ++ ++V L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKF-AQQLCCALAFLSSPEL 233
F + L V + ++ Y+L R F L +F A ++ AL +L S L
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCF----LEPRARFYAAEIASALGYLHS--L 158
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPY 290
+I++ DLKPENILL S + I + DFG + T + + Y +PEVL PY
Sbjct: 159 NIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
D +D W LG +L E+ G P F +N + I+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEK 162
HG RY LG G G V A D++ +VAIK I P + A E++++ +
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 163 INKADIHSRY---------IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
++ +I + + G T N + +V E + +L N++ L
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-------CHV 266
F QL L ++ S +++H DLKP N+ + + + +KI DFG + H
Sbjct: 125 ---FMYQLLRGLKYIHSA--NVLHRDLKPANLFINT-EDLVLKIGDFGLARIMDPHYSHK 178
Query: 267 GQTLYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
G L + + +++YRSP +LL P Y AIDMW+ GCI E+ TG+ LF+G +E++QM
Sbjct: 179 GH-LSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236
Query: 325 IIE 327
I+E
Sbjct: 237 ILE 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL+ F ++L +V E ++ +L R F +A Q+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
+L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ I++ DFG + V + + Y +PE+++
Sbjct: 157 LHS--LDLIYRDLKPENLII--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIIS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 112 YEIDTLLGKGSFG---QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+E+ +LGKG +G QV K A+K++K N E+ ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCCALAF 227
+IV L F L L+ E LS L G+ + T F ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEV 284
L + II+ DLKPENI+L + +K+ DFG S H G + + + Y +PE+
Sbjct: 137 LH--QKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
L+ ++ A+D WSLG ++ ++ TG P F+G+N + KI++ L +PP
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 112 YEIDTLLGKGSFG---QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+E+ +LGKG +G QV K A+K++K N E+ ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCCALAF 227
+IV L F L L+ E LS L G+ + T F ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEV 284
L + II+ DLKPENI+L + +K+ DFG S H G + + + Y +PE+
Sbjct: 137 LH--QKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
L+ ++ A+D WSLG ++ ++ TG P F+G+N + KI++ L +PP
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
K E D Y+ +LG G+F +V+ A D + VAIK I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
KI +I V L + HL L+ +L+S L++ I F+ + +
Sbjct: 71 HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
Q+ A+ +L +L I+H DLKPEN+L S + S I I DFG S G L +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
Y +PEVL PY A+D WS+G I L G P F +N+ +I++
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
+ ++ KL+ F ++L +V E + +L + R H + +A Q+
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH------ARFYAAQIVL 153
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
+L S L +I+ DLKPEN+++ ++ IK+ DFG + V + + Y +PE
Sbjct: 154 TFEYLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
++L Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + Y +P ++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI +FG S H + + Y PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
+ +YE +G+G+FG+V KA + +VA+K +++N+K P +I++ QLL+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
N ++ K + K + LVF+ ++L L+ N +L+ K+ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
L ++ + I+H D+K N+L+ + +K+ DFG + +
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
+ +YR PE+LLG Y ID+W GCI+ E+ T P+ G E Q+ I ++ G
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 247
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
S T + + + DN + +K E + G KR
Sbjct: 248 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 277
Query: 395 HSLADYMKFK---DLILRMLTYDPKKRISPTNVLRHEFF 430
L Y++ DLI ++L DP +RI + L H+FF
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
K E D Y+ +LG G+F +V+ A D + VAIK I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
KI +I V L + HL L+ +L+S L++ I F+ + +
Sbjct: 71 HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
Q+ A+ +L +L I+H DLKPEN+L S + S I I DFG S G L +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
Y +PEVL PY A+D WS+G I L G P F +N+ +I++
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ +EI LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 66
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 123
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI +FG S H + + Y PE+
Sbjct: 124 SYCHSKR--VIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G+P F + +I V P ++ GA
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
IKH + LD Y+I LG G+FG V + + A K + +++ E E
Sbjct: 44 IKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKE 98
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQ 220
+ + +V L F N + +++E +S L+ + + + + +S + ++ +Q
Sbjct: 99 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQ 157
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRY 278
+C L + E + +H DLKPENI+ + + + +K+IDFG + H+ Q++ +
Sbjct: 158 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 215
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+ +PEV G P DMWS+G + L +G F G+N+ + + +
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
K E D Y+ +LG G+F +V+ A D + VAIK I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
KI +I V L + HL L+ +L+S L++ I F+ + +
Sbjct: 71 HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
Q+ A+ +L +L I+H DLKPEN+L S + S I I DFG S G L +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
Y +PEVL PY A+D WS+G I L G P F +N+ +I++
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD++E LG GSFG+V+ E A+KI+ +K+ + +IE L EK +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+++ ++ I++ DFG + V + + Y +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
+ +YE +G+G+FG+V KA + +VA+K +++N+K P +I++ QLL+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
N ++ K + K + LVF+ ++L L+ N +L+ K+ Q L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 134
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
L ++ + I+H D+K N+L+ + +K+ DFG + +
Sbjct: 135 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
+ +YR PE+LLG Y ID+W GCI+ E+ T P+ G E Q+ I ++ G
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 246
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
S T + + + DN + +K E + G KR
Sbjct: 247 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 276
Query: 395 HSLADYMK---FKDLILRMLTYDPKKRISPTNVLRHEFF 430
L Y++ DLI ++L DP +RI + L H+FF
Sbjct: 277 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
+ +YE +G+G+FG+V KA + +VA+K +++N+K P +I++ QLL+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
N ++ K + K + LVF+ ++L L+ N +L+ K+ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
L ++ + I+H D+K N+L+ + +K+ DFG + +
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
+ +YR PE+LLG Y ID+W GCI+ E+ T P+ G E Q+ I ++ G
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 247
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
S T + + + DN + +K E + G KR
Sbjct: 248 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 277
Query: 395 HSLADYMK---FKDLILRMLTYDPKKRISPTNVLRHEFF 430
L Y++ DLI ++L DP +RI + L H+FF
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+L+ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVLIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ ++I LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSH 68
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELANAL 125
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G P F + +I V P ++ GA
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADI 168
D +EI LG G+FG+V KA + E A K+I K + L +E+ +L + +I
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
VKL F ++N+L ++ E + + + ++ + + +Q AL +L
Sbjct: 97 -----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
+ IIH DLK NIL IK+ DFG S +T+ + +I + Y+ +PEV+
Sbjct: 152 HDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 286 L-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ PYD D+WSLG L+E+ EP +E++ M ++++ P L +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKSEPPTLAQPS 264
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTR 364
+S + D L L+K+ D R
Sbjct: 265 RWSSNFKDFLKK---CLEKNVDAR 285
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
LD+++ LG GSFG+V+ E A+KI+ +K+ + QIE L EK +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++VKL+ F ++L +V E ++ +++ +R S + +A Q+ +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
L S L +I+ DLKPEN+L+ ++ I++ DFG + V + + +PE++L
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y+ A+D W+LG ++ E+ G P F + KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
IKH + LD Y+I LG G+FG V + + A K + +++ E E
Sbjct: 150 IKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKE 204
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQ 220
+ + +V L F N + +++E +S L+ + + + + +S + ++ +Q
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQ 263
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRY 278
+C L + E + +H DLKPENI+ + + + +K+IDFG + H+ Q++ +
Sbjct: 264 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 321
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+ +PEV G P DMWS+G + L +G F G+N+ + + +
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
+ +YE +G+G+FG+V KA + +VA+K +++N+K P +I++ QLL+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
N ++ K + K + LVF+ ++L L+ N +L+ K+ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
L ++ + I+H D+K N+L+ + +K+ DFG + +
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
+ +YR PE+LLG Y ID+W GCI+ E+ T P+ G E Q+ I ++ G
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 247
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
S T + + + DN + +K E + G KR
Sbjct: 248 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 277
Query: 395 HSLADYMK---FKDLILRMLTYDPKKRISPTNVLRHEFF 430
L Y++ DLI ++L DP +RI + L H+FF
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 168
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 169 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLG 249
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
L+ ++I LGKG FG V A + + K +A+K++ + L +A +E QL ++ ++
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSH 68
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+ I++L G+F + +L L + L L + + F T + +L AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELANAL 125
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
++ S +IH D+KPEN+LL S +KI DFG S H + + Y PE+
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G +D +D+WSLG + E G P F + +I V P ++ GA
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 167
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 168 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 226
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 227 KEPFFHGHDNYDQLVRIAKVLG 248
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 168
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 169 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLG 249
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 117 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 174
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 175 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 233
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 234 KEPFFHGHDNYDQLVRIAKVLG 255
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + ++ AL + S + I+H D+KP N+++ R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H GQ + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI- 163
GEK D +++ LLGKGSF V +A +VAIK+I K A + +++++
Sbjct: 7 GEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKK------AMYKAGMVQRVQ 59
Query: 164 NKADIHSRY----IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
N+ IH + I++L +F N++ LV E+ N S N + F
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQS 276
Q+ + +L S I+H DL N+LL + IKI DFG + + + Y +
Sbjct: 120 QIITGMLYLHSH--GILHRDLTLSNLLLT--RNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y SPE+ + L D+WSLGC+ L G P F + + K++
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 99 DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQI 155
++++ KF D Y++ LGKG+F V + + A KII KK + +
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT 214
E ++ K+ +I V+L ++ LVF+L++ L+ I F+ S
Sbjct: 78 EARICRKLQHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADA 130
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLY 271
QQ+ ++A+ S I+H +LKPEN+LL S K +A+K+ DFG + V + +
Sbjct: 131 SHCIQQILESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 188
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+ + Y SPEVL PY +D+W+ G IL L G P F
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADI 168
D +EI LG G+FG+V KA + E A K+I K + L +E+ +L + +I
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
VKL F ++N+L ++ E + + + ++ + + +Q AL +L
Sbjct: 97 -----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
+ IIH DLK NIL IK+ DFG S + + + +I + Y+ +PEV+
Sbjct: 152 HDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 286 L-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ PYD D+WSLG L+E+ EP +E++ M ++++ P L +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKSEPPTLAQPS 264
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTR 364
+S + D L L+K+ D R
Sbjct: 265 RWSSNFKDFLKK---CLEKNVDAR 285
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADI 168
D +EI LG G+FG+V KA + E A K+I K + L +E+ +L + +I
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
VKL F ++N+L ++ E + + + ++ + + +Q AL +L
Sbjct: 97 -----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
+ IIH DLK NIL IK+ DFG S + + + +I + Y+ +PEV+
Sbjct: 152 HDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 286 L-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ PYD D+WSLG L+E+ EP +E++ M ++++ P L +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKSEPPTLAQPS 264
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTR 364
+S + D L L+K+ D R
Sbjct: 265 RWSSNFKDFLKK---CLEKNVDAR 285
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 102 IKHGEKFLD--RYEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLN---QA 153
+K G + D ++E+ +LG+GSFG+V VK + Q+ A+K++K + +
Sbjct: 14 VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSL 211
++E +L ++N +IVKL F + L L+ + L +L+ L + F +
Sbjct: 74 KMERDILVEVNHP-----FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TE 125
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQ 268
K + +L AL L S L II+ DLKPENILL + IK+ DFG S +
Sbjct: 126 EDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEK 181
Query: 269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
Y + + Y +PEV+ + + D WS G ++ E+ TG F GK+ + MT I++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 329 -LGMP 332
LGMP
Sbjct: 242 KLGMP 246
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 102 IKHGEKFLD--RYEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLN---QA 153
+K G + D ++E+ +LG+GSFG+V VK + Q+ A+K++K + +
Sbjct: 14 VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSL 211
++E +L ++N +IVKL F + L L+ + L +L+ L + F +
Sbjct: 74 KMERDILVEVNHP-----FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TE 125
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQ 268
K + +L AL L S L II+ DLKPENILL + IK+ DFG S +
Sbjct: 126 EDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEK 181
Query: 269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
Y + + Y +PEV+ + + D WS G ++ E+ TG F GK+ + MT I++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 329 -LGMP 332
LGMP
Sbjct: 242 KLGMP 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 102 IKHGEKFLD--RYEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLN---QA 153
+K G + D ++E+ +LG+GSFG+V VK + Q+ A+K++K + +
Sbjct: 15 VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 74
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSL 211
++E +L ++N +IVKL F + L L+ + L +L+ L + F +
Sbjct: 75 KMERDILVEVNHP-----FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TE 126
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQ 268
K + +L AL L S L II+ DLKPENILL + IK+ DFG S +
Sbjct: 127 EDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEK 182
Query: 269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
Y + + Y +PEV+ + + D WS G ++ E+ TG F GK+ + MT I++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 329 -LGMP 332
LGMP
Sbjct: 243 KLGMP 247
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
+D ++I LGKG FG V A + + K +A+K++ + L + +E QL +I ++
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCALA 226
+ I+++ +F + + L+ E L + HG + F ++L AL
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRG--ELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
+ E +IH D+KPEN+L+ + +KI DFG S H + + Y PE++
Sbjct: 129 YCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
G +D +D+W G + E G P F + + +I+ V L PP
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
+D ++I LGKG FG V A + + K +A+K++ + L + +E QL +I ++
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 71
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCALA 226
+ I+++ +F + + L+ E L + HG + F ++L AL
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRG--ELYKELQKHGRFDEQRSATFMEELADALH 129
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
+ E +IH D+KPEN+L+ + +KI DFG S H + + Y PE++
Sbjct: 130 YCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 185
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
G +D +D+W G + E G P F + + +I+ V L PP
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 15/232 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
K E +E LG G+F +VV A + A+K I K ++ IE + +L
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
KI +I V L+ + NHL LV +L+S L++ I F+ + +
Sbjct: 75 RKIKHENI-----VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFY--TEKDASTLIR 127
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVGQ--TLYQYIQS 276
Q+ A+ +L + I+H DLKPEN+L S + S I I DFG S G+ + +
Sbjct: 128 QVLDAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT 185
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
Y +PEVL PY A+D WS+G I L G P F +N+ +I++
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA 237
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 29/240 (12%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEV 157
++ +Y + LG G+FG V A D E+ +V +K IK +K P L + +E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 158 QLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKK 216
+L ++ A+ I+K+ F + LV E L +L + H + L
Sbjct: 81 AILSRVEHAN-----IIKVLDIFENQGFFQLVMEKHGSGL-DLFAFIDRHPRLDEPLASY 134
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYI 274
+QL A+ +L + IIH D+K ENI++ + IK+IDFGS+ ++ G+ Y +
Sbjct: 135 IFRQLVSAVGYLRLKD--IIHRDIKDENIVIA--EDFTIKLIDFGSAAYLERGKLFYTFC 190
Query: 275 QSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+ Y +PEVL+G PY ++MWSLG V L+T L +N ++ + +E PP
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLG---VTLYT---LVFEENPFCELEETVEAAIHPP 244
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 13/150 (8%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ I NT+F + LT + + +L AL + S I+H D+KP N+++ ++
Sbjct: 118 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSK--GIMHRDVKPHNVMI-DHQQ 174
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H Q + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 175 KKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 234
Query: 309 GEPLFSGKNEVDQMTKIIEVLGMPP--GYL 336
EP F G++ DQ+ +I +VLG GYL
Sbjct: 235 REPFFHGQDNYDQLVRIAKVLGTEELYGYL 264
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 13/150 (8%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ I NT+F + LT + + +L AL + S I+H D+KP N+++ ++
Sbjct: 113 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSK--GIMHRDVKPHNVMI-DHQQ 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H Q + SRY++ PE+L+ YD ++DMWSLGC+L +
Sbjct: 170 KKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 229
Query: 309 GEPLFSGKNEVDQMTKIIEVLGMPP--GYL 336
EP F G++ DQ+ +I +VLG GYL
Sbjct: 230 REPFFHGQDNYDQLVRIAKVLGTEELYGYL 259
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKI 163
KF D Y++ LGKG+F V + + A KII KK + + E ++ K+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+I V+L ++ LVF+L++ L+ I F+ S QQ+
Sbjct: 63 QHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQIL 115
Query: 223 CALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
++A+ S I+H +LKPEN+LL S K +A+K+ DFG + V + + + + Y
Sbjct: 116 ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
SPEVL PY +D+W+ G IL L G P F +++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKI 163
KF D Y++ LGKG+F V + + A KII KK + + E ++ K+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+I V+L ++ LVF+L++ L+ I F+ S QQ+
Sbjct: 63 QHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQIL 115
Query: 223 CALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
++A+ S I+H +LKPEN+LL S K +A+K+ DFG + V + + + + Y
Sbjct: 116 ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
SPEVL PY +D+W+ G IL L G P F +++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
+D ++I LGKG FG V A + + K +A+K++ + L + +E QL +I ++
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCALA 226
+ I+++ +F + + L+ E L + HG + F ++L AL
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRG--ELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
+ E +IH D+KPEN+L+ + +KI DFG S H + + Y PE++
Sbjct: 129 YCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
G +D +D+W G + E G P F + + +I+ V L PP
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 76 NETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK 135
N+ + E Y + G +DE D+ ++F +Y+ ++G+G V +
Sbjct: 62 NDAQPKGTENLYFQSMGPEDELPDWAA--AKEFYQKYDPKDVIGRGVSSVVRRCVHRATG 119
Query: 136 CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK-LKGH---------FTWKNH 185
+ A+KI++ L+ Q LE++ +A +I++ + GH + +
Sbjct: 120 HEFAVKIMEVTAERLSPEQ-----LEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174
Query: 186 LCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN 244
+ LVF+L+ L++ + T +S T+ + L A++FL + +I+H DLKPEN
Sbjct: 175 MFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHAN--NIVHRDLKPEN 230
Query: 245 ILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL------LGIPYDLAIDM 296
ILL I++ DFG SCH+ G+ L + + Y +PE+L Y +D+
Sbjct: 231 ILL--DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 297 WSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
W+ G IL L G P F + ++ + I+E
Sbjct: 289 WACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFF 430
KDLI R+L DP+ R++ L+H FF
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKI 163
KF D Y++ LGKG+F V + + A KII KK + + E ++ K+
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+I V+L ++ LVF+L++ L+ I F+ S QQ+
Sbjct: 62 QHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQIL 114
Query: 223 CALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
++A+ S I+H +LKPEN+LL S K +A+K+ DFG + V + + + + Y
Sbjct: 115 ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 172
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
SPEVL PY +D+W+ G IL L G P F +++
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 211
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+GKGSFG+V K D+ + VAIKII + + + Q E+ +L + + S Y+ K
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SSYVTK 85
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
G + + L ++ E L + +L+R F + K ++ L +L S +
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEKK- 141
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
IH D+K N+LL ++ +K+ DFG + + T + ++ + ++ +PEV+ YD
Sbjct: 142 -IHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 292 LAIDMWSLGCILVELHTGEP 311
D+WSLG +EL GEP
Sbjct: 199 SKADIWSLGITAIELAKGEP 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 16/222 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F D YE+ ++GKG+F V + + E Q A+KI+ K F + + + L++ +A
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTEDLKR--EAS 78
Query: 168 I----HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGV-SLNLTKKFAQQ 220
I +IV+L ++ L +VFE + + +++ + V S + + +Q
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT---LYQYIQS 276
+ AL + + +IIH D+KPEN+LL S + SA +K+ DFG + +G++ + +
Sbjct: 139 ILEALRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGT 196
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
++ +PEV+ PY +D+W G IL L +G F G E
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 18/217 (8%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVK 175
+LG G FGQV K + ++A KIIK + + + E+ ++ +++ A++ ++
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL-----IQ 150
Query: 176 LKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
L F KN + LV E + L++ I + +++ L+ T F +Q+C + + ++
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD-TILFMKQICEGIRHMH--QMY 207
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDL 292
I+H DLKPENIL + IKIIDFG + + L + + +PEV + YD
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV---VNYDF 264
Query: 293 A---IDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
DMWS+G I L +G F G N+ + + I+
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 23/215 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
+E+ L+G G++GQV K + AIK++ + + E+ +L+K + H R
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHR 81
Query: 172 YIVKLKGHFTWKN------HLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
I G F KN L LV E + ++ +LI+NT + + +++
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
L+ L + +IH D+K +N+LL + + +K++DFG S + +T+ + +I + Y+ +
Sbjct: 142 LSHLH--QHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 282 PEVLL-----GIPYDLAIDMWSLGCILVELHTGEP 311
PEV+ YD D+WSLG +E+ G P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 18/230 (7%)
Query: 112 YEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+E+ +LG+GSFG+V V+ + + A+K++K K + ++ ++ E+ AD+
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKM-ERDILADV 87
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ ++VKL F + L L+ + L +L+ L + F + K + +L L
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TEEDVKFYLAELALGLD 144
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPE 283
L S L II+ DLKPENILL + IK+ DFG S + Y + + Y +PE
Sbjct: 145 HLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMP 332
V+ + + D WS G ++ E+ TG F GK+ + MT I++ LGMP
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 107 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 164
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 165 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 223
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 224 KEPFFYGHDNHDQLVKIAKVLG 245
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 127 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 184
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 185 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 243
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 244 KEPFFYGHDNHDQLVKIAKVLG 265
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 107 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 164
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 165 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 223
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 224 KEPFFYGHDNHDQLVKIAKVLG 245
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 108 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 165
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 166 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 224
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 225 KEPFFYGHDNHDQLVKIAKVLG 246
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
++ +E LLGKG+FG+V+ + A+KI+K K+ + + ++ L E N+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 63
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
+SR ++ LK F + LC V E + ++L R F S + + + ++ A
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 120
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
L +L S E ++++ DLK EN++L K IKI DFG G T+ + + Y +
Sbjct: 121 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
PEVL Y A+D W LG ++ E+ G P ++ +E
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
++ + NT+F + LT + + +L AL + S I+H D+KP N+++ R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
+++ID+G + H G+ + SRY++ PE+L+ + YD ++DMWSLGC+ +
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
++ +E LLGKG+FG+V+ + A+KI+K K+ + + ++ L E N+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 65
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
+SR ++ LK F + LC V E + ++L R F S + + + ++ A
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 122
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
L +L S E ++++ DLK EN++L K IKI DFG G T+ + + Y +
Sbjct: 123 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
PEVL Y A+D W LG ++ E+ G P ++ +E
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
++ +E LLGKG+FG+V+ + A+KI+K K+ + + ++ L E N+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 64
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
+SR ++ LK F + LC V E + ++L R F S + + + ++ A
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 121
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
L +L S E ++++ DLK EN++L K IKI DFG G T+ + + Y +
Sbjct: 122 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
PEVL Y A+D W LG ++ E+ G P ++ +E
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
++ +E LLGKG+FG+V+ + A+KI+K K+ + + ++ L E N+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 206
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
+SR ++ LK F + LC V E + ++L R F S + + + ++ A
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 263
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
L +L S E ++++ DLK EN++L K IKI DFG G T+ + + Y +
Sbjct: 264 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
PEVL Y A+D W LG ++ E+ G P ++ +E
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 93 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
++ +E LLGKG+FG+V+ + A+KI+K K+ + + ++ L E N+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 203
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
+SR ++ LK F + LC V E + ++L R F S + + + ++ A
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 260
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
L +L S E ++++ DLK EN++L K IKI DFG G T+ + + Y +
Sbjct: 261 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
PEVL Y A+D W LG ++ E+ G P ++ +E
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKA 166
+D +E +LGKGSFG+V+ A E A+K++K K L +E + EK ++ A
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVECTMTEKRILSLA 80
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
H ++ +L F + L V E ++ ++++ ++ F + +A ++ A
Sbjct: 81 RNHP-FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR---ARFYAAEIISA 136
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHVGQTLYQYIQSRYYR 280
L FL + II+ DLK +N+LL K+ DFG C+ G T + + Y
Sbjct: 137 LMFLH--DKGIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGICN-GVTTATFCGTPDYI 191
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+PE+L + Y A+D W++G +L E+ G F +NE D I+ + P +L A
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDA 251
Query: 341 SKTSKYF 347
+ K F
Sbjct: 252 TGILKSF 258
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
DRYE+ +LG G +V A D + VA+K+++ + P F + + E Q +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
I + Y + +V E + L +++ +T K A ++
Sbjct: 72 PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
C AL F S + IIH D+KP NIL+ + +A+K++DFG S V QT
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANILISA--TNAVKVVDFGIARAIADSGNSVXQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + + +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
G S
Sbjct: 240 SARHEGLS 247
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN----LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 93 FFVKL--YFTFQDDEKLYFGL-SYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 16/217 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKA 166
++ +E+ +LGKGSFG+V A + AIK +K K L +E ++EK ++ A
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLA 75
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
H ++ + F K +L V E L+ +Y++ + H L+ +A ++
Sbjct: 76 WEHP-FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILG 131
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQT-LYQYIQSRYYRS 281
L FL S I++ DLK +NILL K IKI DFG +G ++ + Y +
Sbjct: 132 LQFLHSK--GIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
PE+LLG Y+ ++D WS G +L E+ G+ F G++E
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LG+G FG+V +KA C+ K K+ A +E ++L K+ HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
IV L F K LCLV +++ Y++YN+ + + G + Q+ L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
L + +II+ DLKPEN+LL I + GQT + Y + + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
G YD ++D ++LG L E+ F + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 70 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 124
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL + I+I DFG++ + Q ++ + Y SP
Sbjct: 125 LHGK--GIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 91 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 71 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 125
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL + I+I DFG++ + Q ++ + Y SP
Sbjct: 126 LHGK--GIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LG+G FG+V +KA C+ K K+ A +E ++L K+ HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
IV L F K LCLV +++ Y++YN+ + + G + Q+ L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
L + +II+ DLKPEN+LL I + GQT + Y + + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
G YD ++D ++LG L E+ F + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LG+G FG+V +KA C+ K K+ A +E ++L K+ HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
IV L F K LCLV +++ Y++YN+ + + G + Q+ L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
L + +II+ DLKPEN+LL I + GQT + Y + + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
G YD ++D ++LG L E+ F + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 68 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 122
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 123 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 69 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 123
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 124 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 103 KHGEKFLDRYEIDTLLGK-GSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLL 160
+H + L+ + ++G+ G FG+V KA + E A K+I K + L +E+ +L
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
+ +I VKL F ++N+L ++ E + + + ++ + + +Q
Sbjct: 62 ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ----YIQS 276
AL +L + IIH DLK NIL IK+ DFG S +T Q +I +
Sbjct: 117 TLDALNYLHDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 277 RYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
Y+ +PEV++ PYD D+WSLG L+E+ EP +E++ M ++++
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKS 229
Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTR 364
P L + +S + D L L+K+ D R
Sbjct: 230 EPPTLAQPSRWSSNFKDFLKK---CLEKNVDAR 259
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 93 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 94 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 148
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 149 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 93 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 91 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 93 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 93 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 94 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 148
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 149 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 91 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQL 159
+K G + D Y+I LG G+FG V + + K I P L++ + E+ +
Sbjct: 44 VKQGSVY-DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISI 101
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA 218
+ ++ H ++ L F K + L+ E LS L++ I ++ +S +
Sbjct: 102 MNQL-----HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYM 155
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQS 276
+Q C L + E SI+H D+KPENI+ + K S++KIIDFG + + + + +
Sbjct: 156 RQACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+ +PE++ P DMW++G + L +G F+G+++++ + +
Sbjct: 214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 17/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A + QVA+K + +K Q + E+ E + D H +V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L L +++ +T + + + AL++L + +I
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---ATVCLSVLRALSYLHNQ--GVI 163
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL S R IK+ DFG V + + + + + Y+ +PEV+ +PY
Sbjct: 164 HRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+D+WSLG +++E+ GEP + + + M +I + L PP
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSL--PP 259
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 75 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 129
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 130 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 96 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 150
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 151 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 90 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 144
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 145 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 90 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 144
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 145 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
DRYE+ +LG G +V A D + VA+K+++ + P F + + E Q +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
I + Y + +V E + L +++ +T K A ++
Sbjct: 72 PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
C AL F S + IIH D+KP NI++ + +A+K++DFG S V QT
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + + +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
G S
Sbjct: 240 SARHEGLS 247
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LG+G FG+V +KA C+ K K+ A +E ++L K+ HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
IV L F K LCLV +++ Y++YN+ + + G + Q+ L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
L + +II+ DLKPEN+LL I + GQT + Y + + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
G YD ++D ++LG L E+ F + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-YIVKL 176
LG G++G+V+ D + AIKII+ + +LLE++ + I+KL
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS---KLLEEVAVLKLLDHPNIMKL 101
Query: 177 KGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
F K + LV E L++ +I F+ V + K Q+ + +L +
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGVTYLHKH--N 156
Query: 235 IIHCDLKPENILLCSPKRSA-IKIIDFGSSC--HVGQTLYQYIQSRYYRSPEVLLGIPYD 291
I+H DLKPEN+LL S ++ A IKI+DFG S + + + + + YY +PEVL YD
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYD 215
Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
D+WS+G IL L G P F G+ + + + K+
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
++Y I LG+G FG V + + K K +K K + E+ +L N A
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISIL---NIA--R 59
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
R I+ L F L ++FE +S +++ I NT+ ++ + Q+C AL FL
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFL 118
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
S + H D++PENI+ + + S IKII+FG + + G + Y +PEV
Sbjct: 119 HSHNIG--HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 287 GIPYDLAIDMWSLGCILVELHTG-EPLFSGKNE 318
A DMWSLG ++ L +G P + N+
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+GKGSFG+V K D+ K VAIKII + + + Q E+ +L + + S YI +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYITR 81
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK----------KFAQQLCCAL 225
G + L ++ E L G +L+L K +++ L
Sbjct: 82 YFGSYLKSTKLWIIMEYLG------------GGSALDLLKPGPLEETYIATILREILKGL 129
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSP 282
+L S IH D+K N+LL ++ +K+ DFG + + T + ++ + ++ +P
Sbjct: 130 DYLHSERK--IHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEP 311
EV+ YD D+WSLG +EL GEP
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEP 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF V A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +FT+++ L F L SY L IR T+ + ++ AL +
Sbjct: 91 FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
DRYE+ +LG G +V A D VA+K+++ + P F + + E Q +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
I + Y + +V E + L +++ +T K A ++
Sbjct: 72 PAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
C AL F S + IIH D+KP NI++ + +A+K++DFG S V QT
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + + +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
G S
Sbjct: 240 SARHEGLS 247
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F Y++ LGKG+F V + + A KII KK Q +++ +I +
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-KLEREARICRLL 78
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H IV+L + + H L+F+L++ L+ I ++ S QQ+ A+
Sbjct: 79 KHPN-IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAV- 134
Query: 227 FLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSP 282
L ++ ++H DLKPEN+LL S K +A+K+ DFG + V Q + + + Y SP
Sbjct: 135 -LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 193
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
EVL PY +D+W+ G IL L G P F +++
Sbjct: 194 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 229
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
DRYE+ +LG G +V A D + VA+K+++ + P F + + E Q +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
I + Y + +V E + L +++ +T K A ++
Sbjct: 72 PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
C AL F S + IIH D+KP NI++ + +A+K++DFG S V QT
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
I + Y SPE G D D++SLGC+L E+ TGEP F+G +
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 32/208 (15%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIH 169
E++ ++G+G+FG V KA + VAIK I++ +K F+ +E++ L ++N +I
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAK--DVAIKQIESESERKAFI----VELRQLSRVNHPNI- 63
Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRN-------TNFHGVSLNLTKKFAQQL 221
VKL G N +CLV E +LYN++ T H +S L Q
Sbjct: 64 ----VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL------QC 111
Query: 222 CCALAFLSSPEL-SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
+A+L S + ++IH DLKP N+LL + + +KI DFG++C + + S +
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWM 170
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+PEV G Y D++S G IL E+ T
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVIT 198
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 32/208 (15%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIH 169
E++ ++G+G+FG V KA + VAIK I++ +K F+ +E++ L ++N +I
Sbjct: 12 EVEEVVGRGAFGVVCKAKWRAK--DVAIKQIESESERKAFI----VELRQLSRVNHPNI- 64
Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRN-------TNFHGVSLNLTKKFAQQL 221
VKL G N +CLV E +LYN++ T H +S L Q
Sbjct: 65 ----VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL------QC 112
Query: 222 CCALAFLSSPEL-SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
+A+L S + ++IH DLKP N+LL + + +KI DFG++C + + S +
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWM 171
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+PEV G Y D++S G IL E+ T
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVIT 199
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
++ +LG+GSF VV A + + AIKI++ K+ + + ++ E+ + +
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ VKL +F +++ L F L SY L IR T+ + ++ AL +
Sbjct: 98 FFVKL--YFCFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 152
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
L IIH DLKPENILL I+I DFG++ + Q ++ + Y SP
Sbjct: 153 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E+L + D+W+LGCI+ +L G P F NE KII++
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 254
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVK 175
+LGKGSFG+V+ + A+KI+K K + +E ++EK + ++ +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 176 LKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
L F + L V E L Y++ + R H V +A ++ L FL S
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF------YAAEIAIGLFFLQS 139
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG 287
II+ DLK +N++L S IKI DFG + G T + + Y +PE++
Sbjct: 140 K--GIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
PY ++D W+ G +L E+ G+ F G++E + I+E
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
DRYE+ +LG G +V A D VA+K+++ + P F + + E Q +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
I + Y + +V E + L +++ +T K A ++
Sbjct: 72 PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
C AL F S + IIH D+KP NI++ + +A+K++DFG S V QT
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + + +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
G S
Sbjct: 240 SARHEGLS 247
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
K GE D +E + LG G+ G V K +A K+I + K NQ E+Q+L
Sbjct: 18 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 77
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
+ N S YIV G F + + E + +L +++ + + K +
Sbjct: 78 HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 130
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
+ L +L I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R
Sbjct: 131 AVIKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 187
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLL 337
Y SPE L G Y + D+WS+G LVE+ G P+ SG + + ++ PP L
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLP 247
Query: 338 HGA 340
G
Sbjct: 248 SGV 250
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 119/289 (41%), Gaps = 70/289 (24%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
K D YEI L+G+GS+G V A+D VAIK + L + ++ + +N+
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR- 83
Query: 167 DIHSRYIVKLKGHFTWK-----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
+ S YI++L + + L +V E+ +L L + F ++ K L
Sbjct: 84 -LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYNL 140
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------------- 267
F+ E IIH DLKP N LL + ++KI DFG + +
Sbjct: 141 LLGEKFIH--ESGIIHRDLKPANCLL--NQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 268 --------------QTLYQYIQSRYYRSPE-VLLGIPYDLAIDMWSLGCILVEL------ 306
+ L ++ +R+YR+PE +LL Y +ID+WS GCI EL
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 307 HTGE-----PLFSG-----------------KNEVDQMTKIIEVLGMPP 333
H PLF G K+ DQ+ I V+G PP
Sbjct: 257 HINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPP 305
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 28/240 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
DRYE+ +LG G +V A D VA+K+++ + P F + + E Q +N
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
I + Y + +V E + L +++ +T K A ++
Sbjct: 89 PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 141
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
C AL F S + IIH D+KP NI++ + +A+K++DFG S V QT
Sbjct: 142 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 196
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + + +PP
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 256
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQ--AQIEVQ 158
E F Y + LLGKG FG V ++ QVAIK+I + P + +EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE--LLSYNLYNLIRNTNFHGVSLNLTKK 216
LL K+ H +++L F + LV E L + +L++ I G ++
Sbjct: 87 LLWKVGAGGGHPG-VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE--GPSRC 143
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQ 275
F Q+ A+ S ++H D+K ENIL+ +R K+IDFGS + Y +
Sbjct: 144 FFGQVVAAIQHCHS--RGVVHRDIKDENILI-DLRRGCAKLIDFGSGALLHDEPYTDFDG 200
Query: 276 SRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+R Y PE + Y L +WSLG +L ++ G+ F E+
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HSRYIVK 175
+LGKGSFG+V+ A + AIKI+K K + +E ++EK A + ++ +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILK-KDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 176 LKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L F + L V E ++ +Y++ + F +A ++ L FL +
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIGLFFLH--KR 139
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHV--GQTLYQYIQSRYYRSPEVLLGIPY 290
II+ DLK +N++L S IKI DFG H+ G T ++ + Y +PE++ PY
Sbjct: 140 GIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY 197
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
++D W+ G +L E+ G+P F G++E + I+E
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 70
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 131 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
D YE+ LG G F V K + A K IK ++ ++ + + +E+ +N +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
I I+ L F K + L+ EL+S L++ + ++ + +F +Q+ +
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 143
Query: 227 FLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSP 282
+L S ++ H DLKPENI+L IK+IDFG + G + + +P
Sbjct: 144 YLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E++ P L DMWS+G I L +G F G+ + + +T I V
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 114
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 175 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 230
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+F + Y++ LGKG+F V + + A II KK Q +++ +I +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ-KLEREARICRL 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
H IV+L + + H L+F+L++ L+ I ++ S QQ+ A+
Sbjct: 67 LKHPN-IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAV 123
Query: 226 AFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRS 281
L ++ ++H +LKPEN+LL S K +A+K+ DFG + V Q + + + Y S
Sbjct: 124 --LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
PEVL PY +D+W+ G IL L G P F +++
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 68
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H +L + + YY
Sbjct: 129 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSLTEPCYTPYYV 184
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 120
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 181 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 236
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
D YE+ LG G F V K + A K IK ++ ++ + + +E+ +N +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
I I+ L F K + L+ EL+S L++ + ++ + +F +Q+ +
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 122
Query: 227 FLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSP 282
+L S ++ H DLKPENI+L IK+IDFG + G + + +P
Sbjct: 123 YLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E++ P L DMWS+G I L +G F G+ + + +T I V
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+GKGSFG+V K D+ + VAIKII + + + Q E+ +L + + S Y+ K
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 84
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
G + L ++ E L + +L+ + +++ L +L S +
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 140
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
IH D+K N+LL + +K+ DFG + + T + ++ + ++ +PEV+ YD
Sbjct: 141 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 292 LAIDMWSLGCILVELHTGEP 311
D+WSLG +EL GEP
Sbjct: 198 SKADIWSLGITAIELARGEP 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 70
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 131 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVK 175
+LGKGSFG+V+ + A+KI+K K + +E ++EK + ++ +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 176 LKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
L F + L V E L Y++ + R H V +A ++ L FL S
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF------YAAEIAIGLFFLQS 460
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG 287
II+ DLK +N++L S IKI DFG + G T + + Y +PE++
Sbjct: 461 K--GIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
PY ++D W+ G +L E+ G+ F G++E + I+E
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRYIVK 175
+LG G+F +V A+K IK F + + + E+ +L+KI +I V
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI-----VT 70
Query: 176 LKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA----QQLCCALAFLSS 230
L+ + H LV +L+S L++ I + T+K A QQ+ A+ +L
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERGVY------TEKDASLVIQQVLSAVKYLH- 123
Query: 231 PELSIIHCDLKPENILLCSPKR-SAIKIIDFG-SSCHVGQTLYQYIQSRYYRSPEVLLGI 288
E I+H DLKPEN+L +P+ S I I DFG S + + Y +PEVL
Sbjct: 124 -ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQK 182
Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
PY A+D WS+G I L G P F + E KI E
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 68
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 129 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 184
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D +E+++ LG+G+ V + + A+K++K K + E+ +L +++ +I
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK-KTVDKKIVRTEIGVLLRLSHPNI- 110
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
+KLK F + LV EL++ L++ I ++ S +Q+ A+A+L
Sbjct: 111 ----IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYY--SERDAADAVKQILEAVAYL 164
Query: 229 SSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVG-QTLYQYI-QSRYYRSPEVL 285
E I+H DLKPEN+L +P A +KI DFG S V Q L + + + Y +PE+L
Sbjct: 165 H--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEIL 222
Query: 286 LGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKII 326
G Y +DMWS+G I L G EP + + + +I+
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEF 429
KDL+ +++ DPKKR++ L+H +
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
K GE D +E + LG G+ G V K +A K+I + K NQ E+Q+L
Sbjct: 9 KVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL 68
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
+ N S YIV G F + + E + +L +++ + + K +
Sbjct: 69 HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSI 121
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
+ LA+L + I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R
Sbjct: 122 AVLRGLAYLRE-KHQIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
Y +PE L G Y + D+WS+G LVEL G
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 29 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 84
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 145 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 200
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 75
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 136 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 191
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 74
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 135 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 190
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 76
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 137 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
D YE+ LG G F V K + A K IK ++ ++ + + +E+ +N +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
I I+ L F K + L+ EL+S L++ + ++ + +F +Q+ +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 129
Query: 227 FLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSP 282
+L S ++ H DLKPENI+L IK+IDFG + G + + +P
Sbjct: 130 YLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
E++ P L DMWS+G I L +G F G+ + + +T I V
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+GKGSFG+V K D+ + VAIKII + + + Q E+ +L + + S Y+ K
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 89
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
G + L ++ E L + +L+ + +++ L +L S +
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 145
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
IH D+K N+LL + +K+ DFG + + T + ++ + ++ +PEV+ YD
Sbjct: 146 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 292 LAIDMWSLGCILVELHTGEP 311
D+WSLG +EL GEP
Sbjct: 203 SKADIWSLGITAIELARGEP 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
+LGKGSFG+V A + AIK +K K L +E ++EK ++ A H ++
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLAWEHP-FLT 81
Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
+ F K +L V E L+ +Y++ + H L+ +A ++ L FL S
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQFLHSK- 137
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQT-LYQYIQSRYYRSPEVLLGIP 289
I++ DLK +NILL K IKI DFG +G + + Y +PE+LLG
Sbjct: 138 -GIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNE 318
Y+ ++D WS G +L E+ G+ F G++E
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 14 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 69
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 130 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 185
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + DMWSLG I+ L G P F
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-- 164
++ +E +LG+G+FGQVVKA + + AIK I++ + L+ EV LL +N
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 165 ------KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF 217
A + R VK K+ L + E + LY+LI + N + + F
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------- 269
+Q+ AL+++ S IIH DLKP NI + + +KI DFG + +V ++
Sbjct: 123 -RQILEALSYIHSQ--GIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 270 ---------LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
L I + Y + EVL G Y+ IDM+SLG I E+ P +G V
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235
Query: 320 DQMTKIIEV-LGMPPGY 335
+ + K+ V + PP +
Sbjct: 236 NILKKLRSVSIEFPPDF 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+GKGSFG+V K D+ + VAIKII + + + Q E+ +L + + S Y+ K
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 69
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
G + L ++ E L + +L+ + +++ L +L S +
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
IH D+K N+LL + +K+ DFG + + T + ++ + ++ +PEV+ YD
Sbjct: 126 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 292 LAIDMWSLGCILVELHTGEP 311
D+WSLG +EL GEP
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+GKGSFG+V K D+ + VAIKII + + + Q E+ +L + + S Y+ K
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 69
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
G + L ++ E L + +L+ + +++ L +L S +
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
IH D+K N+LL + +K+ DFG + + T + ++ + ++ +PEV+ YD
Sbjct: 126 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 292 LAIDMWSLGCILVELHTGEP 311
D+WSLG +EL GEP
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 20/237 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD-IHS 170
Y I LG+GSFG+V A ++ + +VA+K I + L ++ + +++ +I+ +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ--LLKKSDMHMRVEREISYLKLLRH 68
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLI----RNTNFHGVSLNLTKKFAQQLCCALA 226
+I+KL T + +V E L++ I R T G ++F QQ+ CA+
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG------RRFFQQIICAIE 122
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEV 284
+ + I+H DLKPEN+LL +KI DFG S + G L S Y +PEV
Sbjct: 123 YCHRHK--IVHRDLKPENLLL--DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 285 LLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G Y +D+WS G +L + G F + + K+ + + P +L GA
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGA 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-- 164
++ +E +LG+G+FGQVVKA + + AIK I++ + L+ EV LL +N
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 165 ------KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF 217
A + R VK K+ L + E + LY+LI + N + + F
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------- 269
+Q+ AL+++ S IIH DLKP NI + + +KI DFG + +V ++
Sbjct: 123 -RQILEALSYIHSQ--GIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 270 ---------LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
L I + Y + EVL G Y+ IDM+SLG I E+ P +G V
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235
Query: 320 DQMTKIIEV-LGMPPGY 335
+ + K+ V + PP +
Sbjct: 236 NILKKLRSVSIEFPPDF 252
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 130
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 131 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+F D Y++ LGKG+F V + + A KII KK Q +++ +I +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRL 86
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
H IV+L + + LVF+L++ L+ I ++ A C
Sbjct: 87 LKHPN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIH 137
Query: 226 AFLSSP----ELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVG---QTLYQYIQSR 277
L S + I+H DLKPEN+LL S K +A+K+ DFG + V Q + + +
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
Y SPEVL PY +D+W+ G IL L G P F +++
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 128
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 129 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LLGKG+FG+V+ + A+KI++ K+ + + ++ + E + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K F + LC V E + ++L R F + + + ++ AL +L S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
+++ D+K EN++L K IKI DFG G T+ + + Y +PEVL Y
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
A+D W LG ++ E+ G P ++ +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
K GE D +E + LG G+ G V K +A K+I + K NQ E+Q+L
Sbjct: 61 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 120
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
+ N S YIV G F + + E + +L +++ + + K +
Sbjct: 121 HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 173
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
+ L +L + I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R
Sbjct: 174 AVIKGLTYLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 230
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
Y SPE L G Y + D+WS+G LVE+ G
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 39/269 (14%)
Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKC-QVAIKIIKNKKPFLNQAQIEVQLLEK 162
HG F + YE +LG+G VV+ H+ C + A+KII A+ EVQ L +
Sbjct: 13 HG--FYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELRE 68
Query: 163 --INKADIHSRY-----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT 214
+ + DI + I++LK + LVF+L+ L++ + T +S T
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKET 126
Query: 215 KKFAQQL---CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQT 269
+K + L CAL +L+I+H DLKPENILL IK+ DFG SC + G+
Sbjct: 127 RKIMRALLEVICALH-----KLNIVHRDLKPENILL--DDDMNIKLTDFGFSCQLDPGEK 179
Query: 270 LYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
L + + Y +PE++ Y +DMWS G I+ L G P F + ++ +
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSD 352
I+ G G+ + Y D + D
Sbjct: 240 MIMS------GNYQFGSPEWDDYSDTVKD 262
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
KDL+ R L P+KR + L H FF ++ V+
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D Y++ LGKG+F V + + A KII KK Q +++ +I + H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 62
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+L + + LVF+L++ L+ I ++ A C L
Sbjct: 63 PN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIQQIL 113
Query: 229 SSPEL----SIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYR 280
S I+H DLKPEN+LL S K +A+K+ DFG + V Q + + + Y
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
SPEVL PY +DMW+ G IL L G P F +++
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ 211
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ--IEVQLLEKINKADIH 169
+E+ LG G FG V++ + QVAIK + + N+ + +E+Q+++K+N ++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN-----TNFHGVSLNLTKKFAQQLCCA 224
S V N L L+ + Y +R N G+ + + A
Sbjct: 77 SAREVPDGLQKLAPNDLPLLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 225 LAFLSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
L +L E IIH DLKPENI+L P+R KIID G + + G+ +++ + Y +
Sbjct: 135 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIE 327
PE+L Y + +D WS G + E TG P V K+ E
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 239
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ--IEVQLLEKINKADIH 169
+E+ LG G FG V++ + QVAIK + + N+ + +E+Q+++K+N ++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN-----TNFHGVSLNLTKKFAQQLCCA 224
S V N L L+ + Y +R N G+ + + A
Sbjct: 76 SAREVPDGLQKLAPNDLPLLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 225 LAFLSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
L +L E IIH DLKPENI+L P+R KIID G + + G+ +++ + Y +
Sbjct: 134 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIE 327
PE+L Y + +D WS G + E TG P V K+ E
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEK 162
GE D +E + LG G+ G V K +A K+I + K NQ E+Q+L +
Sbjct: 4 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 63
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
N S YIV G F + + E + +L +++ + + K + +
Sbjct: 64 CN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV 116
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH-VGQTLYQYIQSRYYR 280
L +L I+H D+KP NIL+ S R IK+ DFG S + + +++ +R Y
Sbjct: 117 IKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDEMANEFVGTRSYM 173
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTG 309
SPE L G Y + D+WS+G LVE+ G
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 70 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 122
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 123 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 70 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 122
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 123 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 37/265 (13%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKC-QVAIKIIKNKKPFLNQAQIEVQLLEK--IN 164
F + YE +LG+G VV+ H+ C + A+KII A+ EVQ L + +
Sbjct: 2 FYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLK 59
Query: 165 KADIHSRY-----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA 218
+ DI + I++LK + LVF+L+ L++ + T +S T+K
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIM 117
Query: 219 QQL---CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQY 273
+ L CAL +L+I+H DLKPENILL IK+ DFG SC + G+ L +
Sbjct: 118 RALLEVICALH-----KLNIVHRDLKPENILL--DDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 274 IQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
+ Y +PE++ Y +DMWS G I+ L G P F + ++ + I+
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
Query: 328 VLGMPPGYLLHGASKTSKYFDRLSD 352
G G+ + Y D + D
Sbjct: 231 ------GNYQFGSPEWDDYSDTVKD 249
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
KDL+ R L P+KR + L H FF ++
Sbjct: 248 KDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D Y++ LGKG+F V + + A KII KK Q +++ +I + H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 62
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+L + + LVF+L++ L+ I ++ S QQ+ L +
Sbjct: 63 PN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQI---LESV 116
Query: 229 SSPEL-SIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPE 283
+ L I+H DLKPEN+LL S K +A+K+ DFG + V Q + + + Y SPE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
VL PY +DMW+ G IL L G P F +++
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ 211
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
K GE D +E + LG G+ G V K +A K+I + K NQ E+Q+L
Sbjct: 26 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
+ N S YIV G F + + E + +L +++ + + K +
Sbjct: 86 HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 138
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
+ L +L I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R
Sbjct: 139 AVIKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 195
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
Y SPE L G Y + D+WS+G LVE+ G
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
Y ++ +G+GS+G+V A + + A KI K +++ + E+++++ ++ +I
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI-- 68
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
++L F + LV EL + L+ + + S + + + A+A+
Sbjct: 69 ---IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD--AARIMKDVLSAVAYCH 123
Query: 230 SPELSIIHCDLKPENIL-LCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
+L++ H DLKPEN L L S +K+IDFG + G+ + + + YY SP+VL
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
G+ Y D WS G ++ L G P FS + + M KI E
Sbjct: 182 GL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
+ LI R+LT PK+RI+ L HE+F K
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKC-QVAIKIIKNKKPFLNQAQIEVQLLEK 162
HG F + YE +LG+G VV+ H+ C + A+KII A+ EVQ L +
Sbjct: 13 HG--FYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELRE 68
Query: 163 --INKADIHSRY-----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT 214
+ + DI + I++LK + LVF+L+ L++ + T +S T
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKET 126
Query: 215 KKFAQQL---CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQT 269
+K + L CAL +L+I+H DLKPENILL IK+ DFG SC + G+
Sbjct: 127 RKIMRALLEVICALH-----KLNIVHRDLKPENILL--DDDMNIKLTDFGFSCQLDPGEK 179
Query: 270 LYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
L + Y +PE++ Y +DMWS G I+ L G P F + ++ +
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSD 352
I+ G G+ + Y D + D
Sbjct: 240 MIMS------GNYQFGSPEWDDYSDTVKD 262
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
KDL+ R L P+KR + L H FF ++ V+
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
Y ++ +G+GS+G+V A + + A KI K +++ + E+++++ ++ +I
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI-- 85
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
++L F + LV EL + L+ + + S + + + A+A+
Sbjct: 86 ---IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD--AARIMKDVLSAVAYCH 140
Query: 230 SPELSIIHCDLKPENIL-LCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
+L++ H DLKPEN L L S +K+IDFG + G+ + + + YY SP+VL
Sbjct: 141 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
G+ Y D WS G ++ L G P FS + + M KI E
Sbjct: 199 GL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
+ LI R+LT PK+RI+ L HE+F K
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWFEKQ 285
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 16/222 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F D YE+ ++GKG F V + + E Q A+KI+ K F + + + L++ +A
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTEDLKR--EAS 80
Query: 168 I----HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGV-SLNLTKKFAQQ 220
I +IV+L ++ L +VFE + + +++ + V S + + +Q
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT---LYQYIQS 276
+ AL + + +IIH D+KP +LL S + SA +K+ FG + +G++ + +
Sbjct: 141 ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 198
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
++ +PEV+ PY +D+W G IL L +G F G E
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 16/222 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F D YE+ ++GKG F V + + E Q A+KI+ K F + + + L++ +A
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTEDLKR--EAS 78
Query: 168 I----HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGV-SLNLTKKFAQQ 220
I +IV+L ++ L +VFE + + +++ + V S + + +Q
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT---LYQYIQS 276
+ AL + + +IIH D+KP +LL S + SA +K+ FG + +G++ + +
Sbjct: 139 ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 196
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
++ +PEV+ PY +D+W G IL L +G F G E
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--------------NKKPFLNQAQIEVQLLEKI 163
LG G++G+V+ + + AIK+IK N + F + E+ LL+ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ +I +KL F K + LV E L+ I N H +Q+
Sbjct: 104 DHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQI--INRHKFDECDAANIMKQIL 156
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRS--AIKIIDFGSSCHVGQ--TLYQYIQSRY 278
+ +L +I+H D+KPENILL K S IKI+DFG S + L + + Y
Sbjct: 157 SGICYLHKH--NIVHRDIKPENILL-ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
Y +PEVL Y+ D+WS G I+ L G P F G+N+ D + K+
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 63/280 (22%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQI--EVQLLEKINKA 166
D Y I L+G+GS+G V A+D + VAIK + + ++ +I E+ +L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
I Y + + + L +V E+ +L L + F ++ K L
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNLLLGEN 143
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG------------------- 267
F+ E IIH DLKP N LL + ++K+ DFG + +
Sbjct: 144 FIH--ESGIIHRDLKPANCLLN--QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 268 ------QTLYQYIQSRYYRSPE-VLLGIPYDLAIDMWSLGCILVEL------HTGE---- 310
+ L ++ +R+YR+PE +LL Y +ID+WS GCI EL H +
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
Query: 311 -PLFSG-----------------KNEVDQMTKIIEVLGMP 332
PLF G K+ DQ+ I ++G P
Sbjct: 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
D +E + LG G+ G V K +A K+I + K NQ E+Q+L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
S YIV G F + + E + +L +++ + + K + + L
Sbjct: 63 --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
+L + I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R Y SPE L
Sbjct: 119 YLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
G Y + D+WS+G LVE+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
+ Y+I LG+GSFG+V A+ +VA+KII NKK L ++ ++ ++ +I+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 70
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ +I+KL K+ + +V E L++ I + +S ++F QQ+ A+ +
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 128
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
+ I+H DLKPEN+LL + +KI DFG S + G L S Y +PEV+
Sbjct: 129 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 286 LGIPY-DLAIDMWSLGCIL 303
G Y +D+WS G IL
Sbjct: 185 SGKLYAGPEVDVWSCGVIL 203
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
D Y+ LG G F V K + Q A K IK ++ ++ + EV +L++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I ++ + L + K + L+ EL++ L++ + ++ +F +Q+
Sbjct: 71 IQHPNV-----ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
+ +L S L I H DLKPENI+L PK IKIIDFG + + G +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
+ Y+I LG+GSFG+V A+ +VA+KII NKK L ++ ++ ++ +I+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ +I+KL K+ + +V E L++ I + +S ++F QQ+ A+ +
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 127
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
+ I+H DLKPEN+LL + +KI DFG S + G L S Y +PEV+
Sbjct: 128 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 286 LGIPY-DLAIDMWSLGCIL 303
G Y +D+WS G IL
Sbjct: 184 SGKLYAGPEVDVWSCGVIL 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
+ Y+I LG+GSFG+V A+ +VA+KII NKK L ++ ++ ++ +I+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 64
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ +I+KL K+ + +V E L++ I + +S ++F QQ+ A+ +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 122
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
+ I+H DLKPEN+LL + +KI DFG S + G L S Y +PEV+
Sbjct: 123 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 286 LGIPY-DLAIDMWSLGCIL 303
G Y +D+WS G IL
Sbjct: 179 SGKLYAGPEVDVWSCGVIL 197
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
+ Y+I LG+GSFG+V A+ +VA+KII NKK L ++ ++ ++ +I+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 60
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ +I+KL K+ + +V E L++ I + +S ++F QQ+ A+ +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 118
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
+ I+H DLKPEN+LL + +KI DFG S + G L S Y +PEV+
Sbjct: 119 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 286 LGIPY-DLAIDMWSLGCIL 303
G Y +D+WS G IL
Sbjct: 175 SGKLYAGPEVDVWSCGVIL 193
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
D +E + LG G+ G V K +A K+I + K NQ E+Q+L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
S YIV G F + + E + +L +++ + + K + + L
Sbjct: 63 --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
+L I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
G Y + D+WS+G LVE+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
D +E + LG G+ G V K +A K+I + K NQ E+Q+L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
S YIV G F + + E + +L +++ + + K + + L
Sbjct: 63 --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
+L I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
G Y + D+WS+G LVE+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
D +E + LG G+ G V K +A K+I + K NQ E+Q+L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
S YIV G F + + E + +L +++ + + K + + L
Sbjct: 63 --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
+L I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
G Y + D+WS+G LVE+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
D +E + LG G+ G V K +A K+I + K NQ E+Q+L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
S YIV G F + + E + +L +++ + + K + + L
Sbjct: 63 --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
+L I+H D+KP NIL+ S R IK+ DFG S + ++ ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
G Y + D+WS+G LVE+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D Y++ +GKG+F V + + A KII KK Q +++ +I + H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 62
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
S IV+L + + LVF+L++ L+ I ++ S QQ+ A L
Sbjct: 63 SN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQI--LEAVL 117
Query: 229 SSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEV 284
++ ++H DLKPEN+LL S K +A+K+ DFG + V Q + + + Y SPEV
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
L Y +D+W+ G IL L G P F +++
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ 211
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 140/311 (45%), Gaps = 29/311 (9%)
Query: 52 LIKTYKHINEVYYTKKKRKAQLSHNE----TRSNKKEKKYVHNDGHDDENYDYIIKHGE- 106
L+ H+ +Y+ + + + E RS ++E + V ++ ++ G+
Sbjct: 14 LVPRGSHMENLYFQGARARQENGMPEKPPGPRSPQREPQRVSHE-QFRAALQLVVDPGDP 72
Query: 107 -KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
+LD + +G+GS G V A VA+K + +K Q + E+ E +
Sbjct: 73 RSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIM 125
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
D +V++ + + L +V E L L +++ +T +N + A L
Sbjct: 126 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVL 180
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
A +IH D+K ++ILL R +K+ DFG V + + + + + Y+ +
Sbjct: 181 QALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGA 340
PE++ +PY +D+WSLG +++E+ GEP + + + M I + +PP LH
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKV 296
Query: 341 SKTSKYF-DRL 350
S + K F DRL
Sbjct: 297 SPSLKGFLDRL 307
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 26/243 (10%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLL 160
G L + I+ +G+G F +V +A + VA+K ++ +A+ E+ LL
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHG--VSLNLTKKF 217
+++N ++ +K F N L +V EL + +L +I++ + K+
Sbjct: 87 KQLNHPNV-----IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLY 271
QLC AL + S ++H D+KP N+ + + +K+ D G S +L
Sbjct: 142 FVQLCSALEHMHS--RRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAHSL- 196
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLG 330
+ + YY SPE + Y+ D+WSLGC+L E+ + P + K + + K IE
Sbjct: 197 --VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 331 MPP 333
PP
Sbjct: 255 YPP 257
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 83 KEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI 142
+EK + G D +Y + I+ E L T +G GSFG V K H + VA+KI
Sbjct: 14 QEKNKIRPRGQRDSSYYWEIEASEVMLS-----TRIGSGSFGTVYKGKWHGD---VAVKI 65
Query: 143 IKNKKPFLNQAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
+K P Q Q EV +L K +I + G+ T K++L +V + +LY
Sbjct: 66 LKVVDPTPEQFQAFRNEVAVLRKTRHVNI-----LLFMGYMT-KDNLAIVTQWCEGSSLY 119
Query: 199 NL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK 256
++ T F L A+Q + +L + +IIH D+K NI L + +K
Sbjct: 120 KHLHVQETKFQMFQL---IDIARQTAQGMDYLHAK--NIIHRDMKSNNIFLH--EGLTVK 172
Query: 257 IIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHT 308
I DFG S Q + Q S + +PEV+ P+ D++S G +L EL T
Sbjct: 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
Query: 309 GEPLFSGKNEVDQMTKII 326
GE +S N DQ+ ++
Sbjct: 233 GELPYSHINNRDQIIFMV 250
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
+D +EI LGKG FG V A + + VA+K++ + + + +E QL +I +A
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ--IEKEGVEHQLRREIEIQAH 79
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LY-NLIRNTNFHGVSLNLTKKFAQQLCCAL 225
+H I++L +F + + L+ E LY L ++ F T ++L AL
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF---DEQRTATIMEELADAL 136
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
+ + +IH D+KPEN+LL + +KI DFG S H + + Y PE+
Sbjct: 137 MYCHGKK--VIHRDIKPENLLLGL--KGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEM 192
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
+ G ++ +D+W +G + EL G P F + + +I++V P + GA
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGA 248
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K +++ +A+ EV+L + ++
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQD----CPKARREVELHWRASQC 114
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
+L S ++I H D+KPEN+L S + +AI K+ DFG ++ H T Y + YY
Sbjct: 175 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 230
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PEVL YD + D WSLG I L G P F
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 29/243 (11%)
Query: 99 DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQ 158
D + K E+ D E LG+GS+G V KA E VAIK Q +E
Sbjct: 21 DSLTKQPEEVFDVLE---KLGEGSYGSVYKAIHKETGQIVAIK----------QVPVESD 67
Query: 159 LLEKINKADI----HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNL 213
L E I + I S ++VK G + L +V E + ++ ++IR N ++ +
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDE 126
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ- 272
Q L +L + IH D+K NILL + + K+ DFG + + + +
Sbjct: 127 IATILQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGHA--KLADFGVAGQLTDXMAKR 182
Query: 273 --YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
I + ++ +PEV+ I Y+ D+WSLG +E+ G+P ++ ++ M I +
Sbjct: 183 NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA---DIHPMRAIFMIPT 239
Query: 331 MPP 333
PP
Sbjct: 240 NPP 242
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
+K D Y+I LG G F V K + + A K IK ++ ++ + + +E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I + +H ++ L + + + L+ EL+S L++ + +S F +Q+
Sbjct: 68 ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
+ +L + +++ H DLKPENI+L IK+IDFG + + G +
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E + +L++ I T + L
Sbjct: 61 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI--TERGALQEEL 115
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 116 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 172
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 35/257 (13%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-- 164
++ +E +LG+G+FGQVVKA + + AIK I++ + L+ EV LL +N
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 165 ------KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF 217
A + R VK K+ L + E + LY+LI + N + + F
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------- 269
+Q+ AL+++ S IIH +LKP NI + + +KI DFG + +V ++
Sbjct: 123 -RQILEALSYIHSQ--GIIHRNLKPXNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 270 ---------LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
L I + Y + EVL G Y+ ID +SLG I E P +G V
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERV 235
Query: 320 DQMTKIIEV-LGMPPGY 335
+ + K+ V + PP +
Sbjct: 236 NILKKLRSVSIEFPPDF 252
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 92/222 (41%), Gaps = 13/222 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
DRY+ +G G+FG D K VA+K I+ Q E+ IN +
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-----INHRSLR 74
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+ K HL ++ E S LY I N S + + F QQL +++
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYC 132
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
S + I H DLK EN LL +KI DFG S + + + Y +PEVLL
Sbjct: 133 HS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
YD I D+WS G L + G F E K I+
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ 232
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
+K D Y+I LG G F V K + + A K IK ++ ++ + + +E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I + +H ++ L + + + L+ EL+S L++ + +S F +Q+
Sbjct: 68 ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
+ +L + +++ H DLKPENI+L IK+IDFG + + G +
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+LGKG++G V D + ++AIK I + +Q E L K + + IV+
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK----HLKHKNIVQ 83
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSPEL 233
G F+ + + E + + + + + + N + +Q+ L +L +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ- 142
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP- 289
I+H D+K +N+L+ + +KI DFG+S + + + Y +PE++ P
Sbjct: 143 -IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 290 -YDLAIDMWSLGCILVELHTGEPLF 313
Y A D+WSLGC ++E+ TG+P F
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
+K D Y+I LG G F V K + + A K IK ++ ++ + + +E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I + +H ++ L + + + L+ EL+S L++ + +S F +Q+
Sbjct: 68 ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
+ +L + +++ H DLKPENI+L IK+IDFG + + G +
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
DRYE+ +G G+FG D + VA+K I+ + + E+ IN +
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+ K HL +V E S L+ I N S + + F QQL +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
+ + + H DLK EN LL +KI DFG S + + + Y +PEVLL
Sbjct: 132 HA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
YD + D+WS G L + G F E K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A VA+K + +K Q + E+ E + D +V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L L +++ +T +N + A L A +I
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL R +K+ DFG V + + + + + Y+ +PE++ +PY
Sbjct: 143 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
+D+WSLG +++E+ GEP + + + M I + +PP LH S + K F DRL
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 257
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A VA+K + +K Q + E+ E + D +V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L L +++ +T +N + A L A +I
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL R +K+ DFG V + + + + + Y+ +PE++ +PY
Sbjct: 148 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
+D+WSLG +++E+ GEP + + + M I + +PP LH S + K F DRL
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 262
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A VA+K + +K Q + E+ E + D +V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L L +++ +T +N + A L A +I
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL R +K+ DFG V + + + + + Y+ +PE++ +PY
Sbjct: 150 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
+D+WSLG +++E+ GEP + + + M I + +PP LH S + K F DRL
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 264
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
+K D Y+I LG G F V K + + A K IK ++ ++ + + +E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I + +H ++ L + + + L+ EL+S L++ + +S F +Q+
Sbjct: 68 ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
+ +L + +++ H DLKPENI+L IK+IDFG + + G +
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
++ + + ++G+G FG+V + A+K + K+ + Q + E +L ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
D +IV + F + L + +L+ N +L + + HGV +F A ++
Sbjct: 248 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
L + + +++ DLKP NILL + ++I D G +C + + + + Y +P
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 359
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
EVL G+ YD + D +SLGC+L +L G F K+E+D+MT + V
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A VA+K + +K Q + E+ E + D +V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L L +++ +T +N + A L A +I
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL R +K+ DFG V + + + + + Y+ +PE++ +PY
Sbjct: 270 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
+D+WSLG +++E+ GEP + + + M I + +PP LH S + K F DRL
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 384
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
+K D Y+I LG G F V K + + A K IK ++ ++ + + +E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I + +H ++ L + + + L+ EL+S L++ + +S F +Q+
Sbjct: 68 ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
+ +L + +++ H DLKPENI+L IK+IDFG + + G +
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A VA+K + +K Q + E+ E + D +V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L L +++ +T +N + A L A +I
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL R +K+ DFG V + + + + + Y+ +PE++ +PY
Sbjct: 139 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
+D+WSLG +++E+ GEP + + + M I + +PP LH S + K F DRL
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 253
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
++ + + ++G+G FG+V + A+K + K+ + Q + E +L ++
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
D +IV + F + L + +L+ N +L + + HGV +F A ++
Sbjct: 247 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 302
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
L + + +++ DLKP NILL + ++I D G +C + + + + Y +P
Sbjct: 303 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 358
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
EVL G+ YD + D +SLGC+L +L G F K+E+D+MT + V
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 410
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
+LGKG++G V D + ++AIK I + +Q E L K + + IV+
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK----HLKHKNIVQ 69
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSPEL 233
G F+ + + E + + + + + + N + +Q+ L +L +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ- 128
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP- 289
I+H D+K +N+L+ + +KI DFG+S + + + Y +PE++ P
Sbjct: 129 -IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 290 -YDLAIDMWSLGCILVELHTGEPLF 313
Y A D+WSLGC ++E+ TG+P F
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
DRYE+ +G G+FG D + VA+K I+ + + E+ IN +
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+ K HL +V E S L+ I N S + + F QQL +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYA 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLL 286
+ + + H DLK EN LL +KI DFG S + + + Y +PEVLL
Sbjct: 132 HA--MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
YD + D+WS G L + G F E K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
++ + + ++G+G FG+V + A+K + K+ + Q + E +L ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
D +IV + F + L + +L+ N +L + + HGV +F A ++
Sbjct: 248 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
L + + +++ DLKP NILL + ++I D G +C + + + + Y +P
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 359
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
EVL G+ YD + D +SLGC+L +L G F K+E+D+MT + V
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
++ + + ++G+G FG+V + A+K + K+ + Q + E +L ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
D +IV + F + L + +L+ N +L + + HGV +F A ++
Sbjct: 248 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
L + + +++ DLKP NILL + ++I D G +C + + + + Y +P
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 359
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
EVL G+ YD + D +SLGC+L +L G F K+E+D+MT + V
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLL 160
G+ +RY+I LG G V A D +VAIK I + K+ L + + EV
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH-- 63
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQ 219
N + + + IV + + LV E + L HG +S++ F
Sbjct: 64 ---NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP--TLSEYIESHGPLSVDTAINFTN 118
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQ---YIQ 275
Q+ + + ++ I+H D+KP+NIL+ S K +KI DFG + + +T L Q +
Sbjct: 119 QILDGIKH--AHDMRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ Y SPE G D D++S+G +L E+ GEP F+G+ V
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
DRYE+ +G G+FG D + VA+K I+ + + E+ IN +
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLR 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+ K HL +V E S L+ I N S + + F QQL +++
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
+ + + H DLK EN LL +KI DFG S + + + Y +PEVLL
Sbjct: 131 HA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
YD + D+WS G L + G F E K I
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
+K E +Y++ LLG G FG V + VAIK ++ + P +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
+EV LL+K++ +++L F + L+ E +L++ I T +
Sbjct: 61 MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 115
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
L + F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 116 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
+K E +Y++ LLG G FG V + VAIK ++ + P +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
+EV LL+K++ +++L F + L+ E +L++ I T +
Sbjct: 61 MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 115
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
L + F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 116 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEK 162
+K D Y+I LG G F V K + + A K IK ++ ++ + E++
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
I + +H I+ L + + + L+ EL+S L++ + +S F +Q+
Sbjct: 68 ILRQVLHPN-IITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
+ +L + + I H DLKPENI+L IK+IDFG + + G +
Sbjct: 125 LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
+ +PE++ P L DMWS+G I L +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+G++G V K +A+K I++ Q Q+ + L + +D YIV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP--YIVQFY 87
Query: 178 GHFTWKNHLCLVFELLSYNL---YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
G + + EL+S + Y + + + + K AL L L
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE-NLK 146
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPEVLLGIP--- 289
IIH D+KP NILL + IK+ DFG S + ++ + + R Y +PE +
Sbjct: 147 IIHRDIKPSNILL--DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 290 -YDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPP 333
YD+ D+WSLG L EL TG + N V DQ+T++++ G PP
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPP 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
+K E +Y++ LLG G FG V + VAIK ++ + P +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
+EV LL+K++ +++L F + L+ E +L++ I T +
Sbjct: 61 MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 115
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
L + F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 116 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
D LG+GSF K + A+KII + Q +I L + H IV
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL-----CEGHPN-IV 69
Query: 175 KLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
KL F + H LV ELL+ L+ I+ S ++L A++ + ++
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMH--DV 125
Query: 234 SIIHCDLKPENILLCSPKRS-AIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP 289
++H DLKPEN+L + IKIIDFG + Q L + +Y +PE+L
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL 329
YD + D+WSLG IL + +G+ F + T +E++
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
+K E +Y++ LLG G FG V + VAIK ++ + P +
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
+EV LL+K++ +++L F + L+ E +L++ I T +
Sbjct: 83 MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 137
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
L + F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 138 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 194
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 61 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 115
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 116 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 172
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 17/225 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
Y++ ++G+G+FG+V + H+ +V + +K + ++ E+ A +S
Sbjct: 77 YDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
++V+L F +L +V E + +L NL+ N + V K + ++ AL + S
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHS 192
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY----IQSRYYRSPEVLL 286
+ +IH D+KP+N+LL K +K+ DFG+ + +T + + + Y SPEVL
Sbjct: 193 --MGLIHRDVKPDNMLL--DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
Y D WS+G L E+ G+ F + V +KI++
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 293
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 77 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 131
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 188
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 76 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 130
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 131 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 187
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 76 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 130
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 131 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 187
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 77 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 131
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 188
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 89 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 96 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 150
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 151 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 207
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 77 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 131
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 188
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 89 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 90 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 90 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 89 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 104 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 158
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 215
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 109 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 163
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 164 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 220
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 90 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 89 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 90 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
D +EI +GKGSFG+V ++ K A+K + NK+ + + ++ E+Q+++ +
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYM-NKQKCVERNEVRNVFKELQIMQGL 72
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
++V L F + + +V +LL Y+L +N +F ++ L F +L
Sbjct: 73 EHP-----FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL---FICEL 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ--TLYQYIQSRYY 279
AL +L + IIH D+KP+NILL + + I DF + + + + ++ Y
Sbjct: 125 VMALDYLQNQR--IIHRDMKPDNILL--DEHGHVHITDFNIAAMLPRETQITTMAGTKPY 180
Query: 280 RSPEVLL---GIPYDLAIDMWSLGCILVELHTG 309
+PE+ G Y A+D WSLG EL G
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G FG V + VAIK ++ + P + +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 104 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 158
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 215
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GS G V A + QVA+K++ +K Q + E+ E + D +V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ L ++ E L L +++ + + + Q ALA+L + +I
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQ---ALAYLHAQ--GVI 163
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K ++ILL R +K+ DFG + + + + + + Y+ +PEV+ Y
Sbjct: 164 HRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
+D+WSLG +++E+ GEP + + V M ++
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL 253
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA+KII K LN + EV++++ +N
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIID--KTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCAL 225
+I VKL + L LV E S + HG + + +Q+ A+
Sbjct: 75 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYRSPE 283
+ + I+H DLK EN+LL IKI DFG S VG L + S Y +PE
Sbjct: 128 QYCH--QKYIVHRDLKAENLLLDGDMN--IKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 284 VLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+ G YD +D+WSLG IL L +G F G+N
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQ 158
E +Y++ LLG G FG V + VAIK ++ + P + +EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKK 216
LL+K++ +++L F + L+ E +L++ I T + L +
Sbjct: 63 LLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARS 117
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQ 275
F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y +
Sbjct: 118 FFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDG 174
Query: 276 SRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 69/274 (25%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIE-----VQLLEKIN 164
+Y + +G+GS+G V A +++ + AIKI+ KNK +N +E V+L++K++
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-------SYNLY----------NLIR----- 202
+I Y V + + ++CLV EL N++ ++++
Sbjct: 87 HPNIARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 203 ---------NTNFHGV--SLNLTKK------FAQQLCCALAFLSSPELSIIHCDLKPENI 245
N + HG SL+ ++ +Q+ AL +L + I H D+KPEN
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ--GICHRDIKPENF 199
Query: 246 LLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR-----------SPEVL--LGIPYDL 292
L + K IK++DFG S + Y+ YY +PEVL Y
Sbjct: 200 LFSTNKSFEIKLVDFGLS----KEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
D WS G +L L G F G N+ D +++++
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL 289
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKI 163
+Y++ LLG G FG V + VAIK ++ + P + +EV LL+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
+ +++L F + L+ E +L++ I T + L + F Q+
Sbjct: 65 SSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQV 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYR 280
A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y + +R Y
Sbjct: 120 LEAVRHCHN--XGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS 176
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 107 KFLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
KF D Y++ + LLG+G++ +V A + + A+KII+ K+ +++++ EV+ L +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQC 67
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
++ I++L F LVFE L L ++ + +F+ + + + +
Sbjct: 68 QG----NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS---RVVRDV 120
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDF--GS------SCHVGQT--L 270
AL FL + I H DLKPENIL SP++ S +KI DF GS SC T L
Sbjct: 121 AAALDFLHTK--GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 271 YQYIQSRYYRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
S Y +PEV+ YD D+WSLG +L + +G P F G D
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD 233
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEF 429
KDLI ++L D K+R+S VL+H +
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 32/241 (13%)
Query: 104 HGEKF-LDRYEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKIIK-----NKKPFLNQAQ 154
H EK ++ +E+ +LG G++G+V K H+ A+K++K K +
Sbjct: 47 HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNF--HGVS 210
E Q+LE I + S ++V L F + L L+ + ++ +L + F H V
Sbjct: 107 TERQVLEHIRQ----SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ 162
Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHV 266
+ + ++ AL L +L II+ D+K ENILL S + + DFG S
Sbjct: 163 I-----YVGEIVLALEHLH--KLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADE 213
Query: 267 GQTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
+ Y + + Y +P+++ G +D A+D WSLG ++ EL TG F+ E + +
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273
Query: 325 I 325
I
Sbjct: 274 I 274
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
LD++E++ LG G FG+V + + VA+K +K + ++E L E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 57
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
+I +V+L G T + ++ E ++Y NL + +R N VS + A Q
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
+ A+ +L + IH DL N L+ + +K+ DFG S G T + +++
Sbjct: 118 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + D+W+ G +L E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKI 163
+Y++ LLG G FG V + VAIK ++ + P + +EV LL+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
+ +++L F + L+ E +L++ I T + L + F Q+
Sbjct: 65 SSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQV 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYR 280
A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y + +R Y
Sbjct: 120 LEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS 176
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKI 163
+Y++ LLG G FG V + VAIK ++ + P + +EV LL+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
+ +++L F + L+ E +L++ I T + L + F Q+
Sbjct: 65 SSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQV 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYR 280
A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y + +R Y
Sbjct: 120 LEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS 176
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
DRYE+ +G G+FG D + VA+K I+ + + E+ IN +
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+ K HL +V E S L+ I N S + + F QQL +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
+ + + H DLK EN LL +KI FG S + + + Y +PEVLL
Sbjct: 132 HA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
YD + D+WS G L + G F E K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
DRYE+ +G G+FG D + VA+K I+ + + E+ IN +
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
IV+ K HL +V E S L+ I N S + + F QQL +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
+ + + H DLK EN LL +KI FG S + + + Y +PEVLL
Sbjct: 132 HA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
YD + D+WS G L + G F E K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
LD++E++ LG G +G+V + + VA+K +K + ++E L E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 57
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
+I +V+L G T + ++ E ++Y NL + +R N VS + A Q
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
+ A+ +L + IH DL N L+ + +K+ DFG S G T + +++
Sbjct: 118 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + D+W+ G +L E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKINKADIHSRYI 173
+G GSFG V A D VAIK + N+ EV+ L+K+ +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L+ H W L + + L S + + V + A Q LA+L S
Sbjct: 122 CYLREHTAW---LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHS--H 173
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI---PY 290
++IH D+K NILL P +K+ DFGS+ + ++ + Y+ +PEV+L + Y
Sbjct: 174 NMIHRDVKAGNILLSEP--GLVKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
D +D+WSLG +EL +P N + + I +
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
LD++E++ LG G +G+V + + VA+K +K + ++E L E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 57
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
+I +V+L G T + ++ E ++Y NL + +R N VS + A Q
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
+ A+ +L + IH DL N L+ + +K+ DFG S G T + +++
Sbjct: 118 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + D+W+ G +L E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VAIKII K LN + EV++++ +N
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIID--KTQLNPTSLQKLFREVRIMKILNHP 71
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L L+ E S + HG + +K A+ Q+
Sbjct: 72 NI-----VKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHG---RMKEKEARSKFRQIV 121
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + I+H DLK EN+LL + IKI DFG S VG L + S Y
Sbjct: 122 SAVQYCHQKR--IVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKINKADIHSRYI 173
+G GSFG V A D VAIK + N+ EV+ L+K+ +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L+ H W L + + L S + + V + A Q LA+L S
Sbjct: 83 CYLREHTAW---LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHSH-- 134
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI---PY 290
++IH D+K NILL P +K+ DFGS+ + ++ + Y+ +PEV+L + Y
Sbjct: 135 NMIHRDVKAGNILLSEP--GLVKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
D +D+WSLG +EL +P N + + I +
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
YE+ ++G+G+FG+V + H+ +V + +K + ++ E+ A +S
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
++V+L F +L +V E + +L NL+ N + V + + ++ AL + S
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHS 191
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY----QYIQSRYYRSPEVLL 286
+ IH D+KP+N+LL K +K+ DFG+ + + + + Y SPEVL
Sbjct: 192 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y D WS+G L E+ G+ F + V +KI+
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
YE+ ++G+G+FG+V + H+ +V + +K + ++ E+ A +S
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
++V+L F +L +V E + +L NL+ N + V + + ++ AL + S
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHS 191
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY----QYIQSRYYRSPEVLL 286
+ IH D+KP+N+LL K +K+ DFG+ + + + + Y SPEVL
Sbjct: 192 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y D WS+G L E+ G+ F + V +KI+
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
YE+ ++G+G+FG+V + H+ +V + +K + ++ E+ A +S
Sbjct: 71 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
++V+L F +L +V E + +L NL+ N + V + + ++ AL + S
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHS 186
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY----QYIQSRYYRSPEVLL 286
+ IH D+KP+N+LL K +K+ DFG+ + + + + Y SPEVL
Sbjct: 187 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y D WS+G L E+ G+ F + V +KI+
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA+KII + LN + + EV++++ +N
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L LV E S + HG + +K A+ Q+
Sbjct: 74 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + + I+H DLK EN+LL + IKI DFG S G L + S Y
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA++II + LN + + EV++++ +N
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L LV E S + HG + +K A+ Q+
Sbjct: 74 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + + I+H DLK EN+LL + IKI DFG S G L ++ S Y
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 60
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 61 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 117
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 118 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA+KII + LN + + EV++++ +N
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L LV E S + HG + +K A+ Q+
Sbjct: 74 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + + I+H DLK EN+LL + IKI DFG S G L + S Y
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 25/266 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+GSFG+ + E+ Q IK I + ++ + E E A++ IV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISR--MSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFH-GVSLNLTK--KFAQQLCCALAFLSSPELS 234
F L +V + +L + N GV + + Q+C AL + +
Sbjct: 90 ESFEENGSLYIVMDYCEGG--DLFKRINAQKGVLFQEDQILDWFVQICLALKHVH--DRK 145
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL---YQYIQSRYYRSPEVLLGIPYD 291
I+H D+K +NI L K +++ DFG + + T+ I + YY SPE+ PY+
Sbjct: 146 ILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYN 203
Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA----SKTSKYF 347
D+W+LGC+L EL T + F + + + KII G P LH + S S+ F
Sbjct: 204 NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPPVSLHYSYDLRSLVSQLF 261
Query: 348 -----DRLSDNSYVLKKSTDTRKERL 368
DR S NS + K R E+
Sbjct: 262 KRNPRDRPSVNSILEKGFIAKRIEKF 287
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 110 DRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
D Y++ +LG G G+V++ F + A+K++ + + Q + I
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCI 68
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
Y G K L ++ E + L++ I+ + + + + A+ F
Sbjct: 69 LDVYENMHHG----KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 124
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFGSSCHVGQTLYQY-IQSRYYRSPEVL 285
L S +I H D+KPEN+L S ++ A+ K+ DFG + Q Q + YY +PEVL
Sbjct: 125 LHS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 182
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF 313
YD + DMWSLG I+ L G P F
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N VS + A Q+ A+ +L + I
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 63 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 110 DRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
D Y++ +LG G G+V++ F + A+K++ + + Q + I
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCI 87
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
Y G K L ++ E + L++ I+ + + + + A+ F
Sbjct: 88 LDVYENMHHG----KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFGSSCHVGQTLYQY-IQSRYYRSPEVL 285
L S +I H D+KPEN+L S ++ A+ K+ DFG + Q Q + YY +PEVL
Sbjct: 144 LHS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 201
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF 313
YD + DMWSLG I+ L G P F
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
G D + D+ I G+ + +G GSFG V K H + VA+K++ P
Sbjct: 11 GSRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 62
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFH 207
Q Q EV +L K +I + G+ T K L +V + +LY+ + H
Sbjct: 63 QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYH-----HLH 111
Query: 208 GVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
K A+Q + +L + SIIH DLK NI L + + +KI DFG
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNTVKIGDFGLA 167
Query: 262 ---SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSG 315
S Q S + +PEV+ PY D+++ G +L EL TG+ +S
Sbjct: 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
Query: 316 KNEVDQMTKIIEVLG 330
N DQ IIE++G
Sbjct: 228 INNRDQ---IIEMVG 239
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N VS + A Q+ A+ +L + I
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA+KII + LN + + EV++++ +N
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCAL 225
+I VKL + L LV E S + HG + + +Q+ A+
Sbjct: 67 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGWMKEKEARAKFRQIVSAV 119
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYRSPE 283
+ I+H DLK EN+LL + IKI DFG S G L + S Y +PE
Sbjct: 120 QYCHQK--FIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 284 VLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+ G YD +D+WSLG IL L +G F G+N
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
L +++ ++G+GS+ +V+ K D +V K + N ++ Q E + E+ +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ ++V L F ++ L V E ++ ++++ R + + ++ ++
Sbjct: 68 ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 120
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
AL +L E II+ DLK +N+LL S IK+ D+G G T + + Y
Sbjct: 121 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 176
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PE+L G Y ++D W+LG ++ E+ G F
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N VS + A Q+ A+ +L + I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA++II + LN + + EV++++ +N
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L LV E S + HG + +K A+ Q+
Sbjct: 74 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + + I+H DLK EN+LL + IKI DFG S G L + S Y
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
L +++ ++G+GS+ +V+ K D +V K + N ++ Q E + E+ +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ ++V L F ++ L V E ++ ++++ R + + ++ ++
Sbjct: 111 ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 163
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
AL +L E II+ DLK +N+LL S IK+ D+G G T + + Y
Sbjct: 164 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 219
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PE+L G Y ++D W+LG ++ E+ G F
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VA+KII + LN + + EV++++ +N
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L LV E S + HG + +K A+ Q+
Sbjct: 74 NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + + I+H DLK EN+LL + IKI DFG S G L + + Y
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
Y + +GKG+F +V A +VAIKII K LN + EV++++ +N
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIID--KTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
+I VKL + L L+ E S + HG + +K A+ Q+
Sbjct: 75 NI-----VKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHG---RMKEKEARSKFRQIV 124
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
A+ + I+H DLK EN+LL + IKI DFG S VG L + + Y
Sbjct: 125 SAVQYCHQKR--IVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
+PE+ G YD +D+WSLG IL L +G F G+N
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
L +++ ++G+GS+ +V+ K D +V K + N ++ Q E + E+ +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ ++V L F ++ L V E ++ ++++ R + + ++ ++
Sbjct: 64 ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 116
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
AL +L E II+ DLK +N+LL S IK+ D+G G T + + Y
Sbjct: 117 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 172
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PE+L G Y ++D W+LG ++ E+ G F
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
L +++ ++G+GS+ +V+ K D +V K + N ++ Q E + E+ +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ ++V L F ++ L V E ++ ++++ R + + ++ ++
Sbjct: 79 ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
AL +L E II+ DLK +N+LL S IK+ D+G G T + + Y
Sbjct: 132 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 187
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PE+L G Y ++D W+LG ++ E+ G F
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N VS + A Q+ A+ +L + I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 48/305 (15%)
Query: 43 APLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYII 102
P R S ++T + YT + SH+ R +K YV + + ++
Sbjct: 33 GPWRNESALSVETLLDVLVCLYT------ECSHSALRRDK----YVAEFLEWAKPFTQLV 82
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
K + + +EI ++G+G+FG+V + A+KI+ NK L +A+ E+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-NKWEMLKRAETACFREER 141
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ ++I L F +NHL LV + G L L KF +L
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYY------------VGGDLLTLLSKFEDKLP 189
Query: 223 ----------CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
LA S +L +H D+KP+N+LL I++ DFGS +
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL--DVNGHIRLADFGSCLKMNDD--G 245
Query: 273 YIQSRY------YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
+QS Y SPE+L + Y D WSLG + E+ GE F ++ V+
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
Query: 322 MTKII 326
KI+
Sbjct: 306 YGKIM 310
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 48/305 (15%)
Query: 43 APLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYII 102
P R S ++T + YT + SH+ R +K YV + + ++
Sbjct: 17 GPWRNESALSVETLLDVLVCLYT------ECSHSALRRDK----YVAEFLEWAKPFTQLV 66
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
K + + +EI ++G+G+FG+V + A+KI+ NK L +A+ E+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-NKWEMLKRAETACFREER 125
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
+ ++I L F +NHL LV + G L L KF +L
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYY------------VGGDLLTLLSKFEDKLP 173
Query: 223 ----------CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
LA S +L +H D+KP+N+LL I++ DFGS +
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL--DVNGHIRLADFGSCLKMNDD--G 229
Query: 273 YIQSRY------YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
+QS Y SPE+L + Y D WSLG + E+ GE F ++ V+
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 322 MTKII 326
KI+
Sbjct: 290 YGKIM 294
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N VS + A Q+ A+ +L + I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 27/254 (10%)
Query: 90 NDGHDDENYDYIIKHGEKFLDRYEIDTL-----LGKGSFGQVVKAFDHEEKCQVAIKIIK 144
+ G + Y+ G+++ + EI+ L +G G+ GQV K + +A+K ++
Sbjct: 2 SSGSSGKQTGYLTIGGQRY--QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNT 204
+I + L + D YIV+ G F + + EL+ L +
Sbjct: 60 RSGNKEENKRILMDLDVVLKSHDCP--YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRM 117
Query: 205 NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
+ + K + AL +L +IH D+KP NILL +R IK+ DFG S
Sbjct: 118 Q-GPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILL--DERGQIKLCDFGIS- 172
Query: 265 HVGQTLYQYIQSR-----YYRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGE-PLF 313
G+ + + R Y +PE + YD+ D+WSLG LVEL TG+ P
Sbjct: 173 --GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK 230
Query: 314 SGKNEVDQMTKIIE 327
+ K + + +TK+++
Sbjct: 231 NCKTDFEVLTKVLQ 244
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G++G+V A + + VA+KI+ K+ I+ ++ IN A
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--IN-AM 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
++ +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 134
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 135 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 193 KSDVWAFGVLLWEIAT 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F++ +++ LG+G+ G+V A + + VA+KI+ K+ I+ ++ INK
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
H +VK GH N L E S L++ I G+ ++F QL +
Sbjct: 62 NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
+L + I H D+KPEN+LL +R +KI DFG + + + L + + Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
PE+L + +D+WS G +L + GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 89/339 (26%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINK 165
+F D YE+ +G GS+ + + A+KII K+K+ + +I ++ + N
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPN- 77
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
I+ LK + ++ +V EL+ L + I F F+++ A
Sbjct: 78 -------IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF----------FSEREASA 120
Query: 225 LAFLSSPEL------SIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQY 273
+ F + + ++H DLKP NIL S +I+I DFG + + L
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMP 332
+ + +PEVL YD A D+WSLG +L + TG P +G ++ + +I+ +G
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSG 238
Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXX 392
L G Y++ +SD +
Sbjct: 239 KFSLSGG------YWNSVSDTA-------------------------------------- 254
Query: 393 XXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFL 431
KDL+ +ML DP +R++ VLRH + +
Sbjct: 255 -----------KDLVSKMLHVDPHQRLTAALVLRHPWIV 282
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 95 DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
D + D+ I G+ + +G GSFG V K H + VA+K++ P Q Q
Sbjct: 2 DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ 53
Query: 155 I---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVS 210
EV +L K +I + G+ T K L +V + +LY+ + H
Sbjct: 54 AFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYH-----HLHASE 102
Query: 211 LNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----- 261
K A+Q + +L + SIIH DLK NI L + + +KI DFG
Sbjct: 103 TKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNTVKIGDFGLATVK 158
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
S Q S + +PEV+ PY D+++ G +L EL TG+ +S N
Sbjct: 159 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 218
Query: 319 VDQMTKIIEVLG 330
DQ IIE++G
Sbjct: 219 RDQ---IIEMVG 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF 149
GH NYD + ++R +I LG G +G+V + + VA+K +K
Sbjct: 1 GHMSPNYD------KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---- 50
Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG 208
+ ++E L E +I +V+L G T + ++ E ++Y NL + +R N
Sbjct: 51 -DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVG 267
V+ + A Q+ A+ +L + IH DL N L+ + +K+ DFG S G
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG 165
Query: 268 QTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
T + +++ + +PE L + + D+W+ G +L E+ T
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+G+ G V A D +VAI+ + ++ + I L+ + NK + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L+ +L +++ T + + Q AL FL S + +I
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSNQ--VI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGIPYDLA 293
H D+K +NILL ++K+ DFG + + + + Y+ +PEV+ Y
Sbjct: 139 HRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 IDMWSLGCILVELHTGEPLFSGKN 317
+D+WSLG + +E+ GEP + +N
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N VS + A Q+ A+ +L + + I
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFI 340
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H +L N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 341 HRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 399 KSDVWAFGVLLWEIAT 414
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
G D + D+ I G+ + +G GSFG V K H + VA+K++ P
Sbjct: 22 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 73
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
Q Q EV +L K +I + G+ T K L +V + +LY+ I T
Sbjct: 74 QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 127
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
F + L A+Q + +L + SIIH DLK NI L + +KI DFG
Sbjct: 128 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATV 180
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
S Q S + +PEV+ PY D+++ G +L EL TG+ +S N
Sbjct: 181 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
DQ II ++G GYL SK K RL + LKK D R
Sbjct: 241 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 284
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
G D + D+ I G+ + +G GSFG V K H + VA+K++ P
Sbjct: 23 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 74
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
Q Q EV +L K +I + G+ T K L +V + +LY+ I T
Sbjct: 75 QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
F + L A+Q + +L + SIIH DLK NI L + +KI DFG
Sbjct: 129 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATV 181
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
S Q S + +PEV+ PY D+++ G +L EL TG+ +S N
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
DQ II ++G GYL SK K RL + LKK D R
Sbjct: 242 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 285
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
G D + D+ I G+ + +G GSFG V K H + VA+K++ P
Sbjct: 23 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 74
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
Q Q EV +L K +I + G+ T K L +V + +LY+ I T
Sbjct: 75 QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
F + L A+Q + +L + SIIH DLK NI L + +KI DFG
Sbjct: 129 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATE 181
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
S Q S + +PEV+ PY D+++ G +L EL TG+ +S N
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
DQ II ++G GYL SK K RL + LKK D R
Sbjct: 242 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 285
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 135
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 136 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
G D + D+ I G+ + +G GSFG V K H + VA+K++ P
Sbjct: 15 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 66
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
Q Q EV +L K +I + G+ T K L +V + +LY+ I T
Sbjct: 67 QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 120
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
F + L A+Q + +L + SIIH DLK NI L + +KI DFG
Sbjct: 121 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATE 173
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
S Q S + +PEV+ PY D+++ G +L EL TG+ +S N
Sbjct: 174 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
DQ II ++G GYL SK K RL + LKK D R
Sbjct: 234 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 277
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIHS 170
Y + +GKG+F +V A +VA+KII + LN + ++ E +I K H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIXKVLNHP 73
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGV--SLNLTKKFAQQLCCALAFL 228
IVKL + L LV E S + HG KF +Q+ A+ +
Sbjct: 74 N-IVKLFEVIETEKTLYLVXEYASGG--EVFDYLVAHGRXKEKEARAKF-RQIVSAVQYC 129
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYRSPEVLL 286
+ I+H DLK EN+LL + IKI DFG S G L + + Y +PE+
Sbjct: 130 H--QKFIVHRDLKAENLLLDADXN--IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 287 GIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
G YD +D+WSLG IL L +G F G+N
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 146
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 147 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 205 KSDVWAFGVLLWEIAT 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-QAQI--EVQLLEKINKADIHSRYIV 174
LG+G F V + + A K +K ++ + +A+I E+ +LE ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP----RVI 92
Query: 175 KLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L + + + L+ E + +++L VS N + +Q+ + +L +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH--QN 150
Query: 234 SIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPY 290
+I+H DLKP+NILL S IKI+DFG S +G L + + + Y +PE+L P
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI 210
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
A DMW++G I L T F G++ + I +V
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYI 173
++ ++G G FG+V +AF + +VA+K ++ IE E A + I
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
+ L+G + +LCLV E N R + + ++ +A Q+ + +L +
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLN--RVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 234 -SIIHCDLKPENILLCSPKRSA------IKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
IIH DLK NIL+ + +KI DFG + +T Y + +PEV+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
+ D+WS G +L EL TGE F G
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 137
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 138 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 196 KSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+G+ G V A D +VAI+ + ++ + I L+ + NK + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + L +V E L+ +L +++ T + + Q AL FL S + +I
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSNQ--VI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
H D+K +NILL ++K+ DFG + + + + Y+ +PEV+ Y
Sbjct: 139 HRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 IDMWSLGCILVELHTGEPLFSGKN 317
+D+WSLG + +E+ GEP + +N
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+ RY LGKG F + + D + K A K++ K L Q E E +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 83
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++V G F + + +V E+ +L L + V+ + F +Q + +
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 141
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
L + +IH DLK N+ L +KI DFG + + G+ + Y +PEV
Sbjct: 142 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 197
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
L + +D+WSLGCIL L G+P F
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
+D++E++ LG G +G+V + VA+K +K + ++E L E
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 78
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
+I +V+L G T + +V E + Y NL + +R N V+ + A Q
Sbjct: 79 AAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQ 138
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
+ A+ +L + IH DL N L+ + +K+ DFG S G T + +++
Sbjct: 139 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + D+W+ G +L E+ T
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+ RY LGKG F + + D + K A K++ K L Q E E +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++V G F + + +V E+ +L L + V+ + F +Q + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
L + +IH DLK N+ L +KI DFG + + G+ + Y +PEV
Sbjct: 158 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 213
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
L + +D+WSLGCIL L G+P F
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+G+ G V A D +VAI+ + ++ + I L+ + NK + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
+ + L +V E L+ +L +++ T G + ++ Q AL FL S + +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 137
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
IH D+K +NILL ++K+ DFG + + + + Y+ +PEV+ Y
Sbjct: 138 IHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
+D+WSLG + +E+ GEP + +N
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+G+ G V A D +VAI+ + ++ + I L+ + NK + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 84
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
+ + L +V E L+ +L +++ T G + ++ Q AL FL S + +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
IH D+K +NILL ++K+ DFG + + + + Y+ +PEV+ Y
Sbjct: 139 IHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
+D+WSLG + +E+ GEP + +N
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+ RY LGKG F + + D + K A K++ K L Q E E +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++V G F + + +V E+ +L L + V+ + F +Q + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
L + +IH DLK N+ L +KI DFG + + G+ + Y +PEV
Sbjct: 158 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEV 213
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
L + +D+WSLGCIL L G+P F
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKAD 167
D YE+ ++G G+ V A+ +K +VAIK I +K +++ E+Q + + + +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG------VSLNLTKKFAQQ 220
I S Y F K+ L LV +LLS ++ ++I++ G + + ++
Sbjct: 75 IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--------QTLYQ 272
+ L +L IH D+K NILL + +++I DFG S + +
Sbjct: 130 VLEGLEYLHKN--GQIHRDVKAGNILLG--EDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 273 YIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTG 309
++ + + +PEV+ + YD D+WS G +EL TG
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
F+ +I L DP+KR + +LRH+FF K
Sbjct: 264 FRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+ RY LGKG F + + D + K A K++ K L Q E E +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ ++V G F + + +V E+ +L L + V+ + F +Q + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
L + +IH DLK N+ L +KI DFG + + G+ + Y +PEV
Sbjct: 158 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEV 213
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
L + +D+WSLGCIL L G+P F
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
G D D+ I G+ + +G GSFG V K H + VA+K++ P
Sbjct: 11 GSRDAADDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 62
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFH 207
Q Q EV +L K +I + G+ T L +V + +LY+ + H
Sbjct: 63 QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-APQLAIVTQWCEGSSLYH-----HLH 111
Query: 208 GVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
K A+Q + +L + SIIH DLK NI L + + +KI DFG
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNTVKIGDFGLA 167
Query: 262 ---SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSG 315
S Q S + +PEV+ PY D+++ G +L EL TG+ +S
Sbjct: 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
Query: 316 KNEVDQMTKIIEVLG 330
N DQ IIE++G
Sbjct: 228 INNRDQ---IIEMVG 239
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 92 GHDDENYDYIIKHGEKFLDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF 149
GH NYD + ++R +I LG G +G+V + + VA+K +K
Sbjct: 1 GHMSPNYD------KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---- 50
Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG 208
+ ++E L E +I +V+L G T + ++ E ++Y NL + +R N
Sbjct: 51 -DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVG 267
V+ + A Q+ A+ +L + IH DL N L+ + +K+ DFG S G
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG 165
Query: 268 QTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
T +++ + +PE L + + D+W+ G +L E+ T
Sbjct: 166 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 38/236 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
+EI ++G+G+FG+V +K+ K F + + ++L++ A
Sbjct: 76 FEILKVIGRGAFGEVA-----------VVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
V + G W L F+ NLY L+ + G L L KF +L +A
Sbjct: 125 RDVLVNGDSKWITTLHYAFQD-DNNLY-LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA 182
Query: 232 ELSI----------IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
E+ I +H D+KP+NIL+ I++ DFGS + + +QS
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILM--DMNGHIRLADFGSCLKLMED--GTVQSSVAVG 238
Query: 279 ---YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y SPE+L + Y D WSLG + E+ GE F ++ V+ KI+
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+D Y++ + +LG G G+V++ F+ + + A+K++++ +A+ EV+L + ++
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 70
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
R + + + + L +V E L L++ I++ + + + + A+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
+L S ++I H D+KPEN+L S + +AI K+ DFG +
Sbjct: 131 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------ 170
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
G YD + DMWSLG I+ L G P F
Sbjct: 171 -TGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 107 KFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
+F D Y++ + +LG+G+ +V + + A+KII+ K+P ++++ EV++L +
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQC 67
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
R +++L F ++ LVFE + L ++ + +F+ + ++ Q +
Sbjct: 68 QG----HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---VQDV 120
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFG--------SSCHVGQT--L 270
AL FL + I H DLKPENIL P + S +KI DFG C T L
Sbjct: 121 ASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 271 YQYIQSRYYRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
S Y +PEV+ YD D+WSLG IL L +G P F G+ D
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
KDLI ++L D K+R+S VL+H + + +N
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKAD 167
D YE+ ++G G+ V A+ +K +VAIK I +K +++ E+Q + + + +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG------VSLNLTKKFAQQ 220
I S Y F K+ L LV +LLS ++ ++I++ G + + ++
Sbjct: 70 IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--------QTLYQ 272
+ L +L IH D+K NILL + +++I DFG S + +
Sbjct: 125 VLEGLEYLHKN--GQIHRDVKAGNILLG--EDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 273 YIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTG 309
++ + + +PEV+ + YD D+WS G +EL TG
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
F+ +I L DP+KR + +LRH+FF K
Sbjct: 259 FRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 337
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H +L N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 338 HRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 396 KSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + + I
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFI 379
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H +L N L+ + +K+ DFG S G T + +++ + +PE L + +
Sbjct: 380 HRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 438 KSDVWAFGVLLWEIAT 453
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G +G+V + + VA+K +K + ++E L E +I +V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
G T + ++ E ++Y NL + +R N V+ + A Q+ A+ +L + I
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 134
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
H DL N L+ + +K+ DFG S G T +++ + +PE L + +
Sbjct: 135 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 293 AIDMWSLGCILVELHT 308
D+W+ G +L E+ T
Sbjct: 193 KSDVWAFGVLLWEIAT 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 95 DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
D + D+ I G+ + +G GSFG V K H + VA+K++ P Q Q
Sbjct: 3 DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ 54
Query: 155 I---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHG 208
EV +L K +I + G+ T K L +V + +LY+ I T F
Sbjct: 55 AFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM 108
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SS 263
+ L A+Q + +L + SIIH DLK NI L + +KI DFG S
Sbjct: 109 IKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSR 161
Query: 264 CHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
Q S + +PEV+ PY D+++ G +L EL TG+ +S N D
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 321 QMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
Q II ++G GYL SK K RL + LKK D R
Sbjct: 222 Q---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 262
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 50/277 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
LG G+FG V + + IK I +++ P + Q + E+++L+ ++ +I +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-MEQIEAEIEVLKSLDHPNI-----I 83
Query: 175 KLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSP 231
K+ F +++ +V E L I + G +L+ + +Q+ ALA+ S
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 232 ELSIIHCDLKPENILL--CSPKRSAIKIIDFG----------SSCHVGQTLYQYIQSRYY 279
++H DLKPENIL SP S IKIIDFG S+ G LY
Sbjct: 144 H--VVHKDLKPENILFQDTSP-HSPIKIIDFGLAELFKSDEHSTNAAGTALYM------- 193
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN--EVDQMTKIIEVLGMPPGYLL 337
+PEV D+WS G ++ L TG F+G + EV Q E P Y +
Sbjct: 194 -APEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE-----PNYAV 246
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
T + D +LK+ ER P + ++
Sbjct: 247 ECRPLTPQAVD-------LLKQMLTKDPERRPSAAQV 276
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 405 DLILRMLTYDPKKRISPTNVLRHEFF 430
DL+ +MLT DP++R S VL HE+F
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 95 DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
D + D+ I G+ + +G GSFG V K H + VA+K++ P Q Q
Sbjct: 3 DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ 54
Query: 155 I---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHG 208
EV +L K +I + G+ T K L +V + +LY+ I T F
Sbjct: 55 AFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM 108
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SS 263
+ L A+Q + +L + SIIH DLK NI L + +KI DFG S
Sbjct: 109 IKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSR 161
Query: 264 CHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
Q S + +PEV+ PY D+++ G +L EL TG+ +S N D
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 321 QMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
Q II ++G GYL SK K RL + LKK D R
Sbjct: 222 Q---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 262
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+G+G+ G V A D +VAI+ + ++ + I L+ + NK + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 84
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
+ + L +V E L+ +L +++ T G + ++ Q AL FL S + +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
IH ++K +NILL ++K+ DFG + + + + Y+ +PEV+ Y
Sbjct: 139 IHRNIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
+D+WSLG + +E+ GEP + +N
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LG+G++G VV+ H Q+ A+K I+ Q ++ + L I+ + + V
Sbjct: 59 LGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 115
Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
G + + + EL+ +L + G ++ ++ K A + AL L S +LS
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLS 174
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPE----VLLGI 288
+IH D+KP N+L+ + +K+ DFG S ++ ++ + I + + Y +PE L
Sbjct: 175 VIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
Y + D+WSLG ++EL P S Q+ +++E
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
+G GSFG V K H + VA+K++ P Q Q EV +L K +I +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 69
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
G+ T K L +V + +LY+ I T F + L A+Q + +L +
Sbjct: 70 LFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 125
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
SIIH DLK NI L + +KI DFG S Q S + +PEV+
Sbjct: 126 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 287 ---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
PY D+++ G +L EL TG+ +S N DQ II ++G GYL SK
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 236
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
K RL + LKK D R
Sbjct: 237 RSNCPKAMKRLM--AECLKKKRDER 259
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
+G GSFG V K H + VA+K++ P Q Q EV +L K +I +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 67
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
G+ T K L +V + +LY+ I T F + L A+Q + +L +
Sbjct: 68 LFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 123
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
SIIH DLK NI L + +KI DFG S Q S + +PEV+
Sbjct: 124 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
PY D+++ G +L EL TG+ +S N DQ II ++G GYL SK
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 234
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
K RL + LKK D R
Sbjct: 235 RSNCPKAMKRLM--AECLKKKRDER 257
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHS 170
+G+G+FG+V +A +E VA+K++K + QA Q E L+ + + +I
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI-- 112
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVS----LNLTKK--------- 216
VKL G +CL+FE ++Y +L +R+ + H V +L+ +
Sbjct: 113 ---VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 217 ---FAQQLCCA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
A+QLC A +A+LS E +H DL N L+ + +KI DFG S ++
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS--ERKFVHRDLATRNCLV--GENMVVKIADFGLSRNIY 225
Query: 268 QTLY------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
Y I R+ PE + Y D+W+ G +L E+ +
Sbjct: 226 SADYYKADGNDAIPIRWM-PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
+G GSFG V K H + VA+K++ P Q Q EV +L K +I +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 67
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
G+ T K L +V + +LY+ I T F + L A+Q + +L +
Sbjct: 68 LFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 123
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
SIIH DLK NI L + +KI DFG S Q S + +PEV+
Sbjct: 124 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
PY D+++ G +L EL TG+ +S N DQ II ++G GYL SK
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 234
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
K RL + LKK D R
Sbjct: 235 RSNCPKAMKRLM--AECLKKKRDER 257
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 446
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
+IVKL G T +N + ++ EL + L + ++ F SL+L +A QL
Sbjct: 447 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 502
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----Y 278
ALA+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+
Sbjct: 503 ALAYLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIK 557
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
+ +PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 615
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D +EI ++G+G+F +V ++ QV I NK L + ++ E+ +
Sbjct: 61 DDFEILKVIGRGAFSEVA-VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 170 SRYIVKLKGHFTWKNHLCLVFEL-LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
R+I +L F +N+L LV E + +L L+ + + + + ++ A+
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAID-- 176
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQ--SRYYRSPEV 284
S L +H D+KP+NILL + I++ DFGS T+ + + Y SPE+
Sbjct: 177 SVHRLGYVHRDIKPDNILL--DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 285 LLGIPYDLA-------IDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
L + D W+LG E+ G+ F + + KI+
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 21/241 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKK----PFLNQAQIEVQL 159
G + Y + LG G+FG+V K HE +VA+KI+ +K + + + E+Q
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKV-KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN 69
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA 218
L+ +I+KL + + + +V E +S L++ I + +++
Sbjct: 70 LKLFRHP-----HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLF 122
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
QQ+ + + ++H DLKPEN+LL + + KI DFG S + G+ L S
Sbjct: 123 QQILSGVDYCH--RHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRXSCGS 178
Query: 277 RYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
Y +PEV+ G Y +D+WS G IL L G F + KI + + P Y
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY 238
Query: 336 L 336
L
Sbjct: 239 L 239
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 68
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 69 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 128 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 182
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 67 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 126 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 180
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-EVQLLEKI----NK 165
R + +L +G F V +A D + A+K + + + N+A I EV ++K+ N
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCA 224
S + + T + L+ EL L ++ G +S + K Q C A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-TLYQYIQSR------ 277
+ + + IIH DLK EN+LL + + IK+ DFGS+ + Y + R
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSN--QGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 278 --------YYRSPEVL---LGIPYDLAIDMWSLGCIL 303
YR+PE++ P D+W+LGCIL
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 69
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 70 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 129 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 183
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKI--IEVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 94
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 95 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 154 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 208
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKI--IEVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 263
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 67 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 126 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 180
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 71
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 72 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 131 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 185
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKI--IEVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 63
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+IVKL G T +N + ++ EL + + + L +A QL ALA
Sbjct: 64 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
+L S +H D+ N+L+ S +K+ DFG S ++ + Y Y S+ + +
Sbjct: 123 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 177
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 107 KFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
+F D Y++ + +LG+G+ +V + + A+KII+ K+P ++++ EV++L +
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQC 67
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
R +++L F ++ LVFE + L ++ + +F+ + ++ Q +
Sbjct: 68 QG----HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---VQDV 120
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDF--GSS------CHVGQT--L 270
AL FL + I H DLKPENIL P + S +KI DF GS C T L
Sbjct: 121 ASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 271 YQYIQSRYYRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
S Y +PEV+ YD D+WSLG IL L +G P F G+ D
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
KDLI ++L D K+R+S VL+H + + +N
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPY 290
+++H DLKP N+ L + +K+ DFG + H +++ + YY SPE + + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
+ D+WSLGC+L EL P F+ ++ + KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 40/257 (15%)
Query: 81 NKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAFDH-----E 133
+ E K GH EN Y + R +I LG+G+FG+V A H +
Sbjct: 10 SPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQ 69
Query: 134 EKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL 192
+K VA+K +K Q Q E +LL + ++IV+ G T L +VFE
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQH-----QHIVRFFGVCTEGRPLLMVFEY 124
Query: 193 LSYNLYNLIRNTNFHG----------------VSLNLTKKFAQQLCCALAFLSSPELSII 236
+ + +L R HG + L A Q+ + +L+ L +
Sbjct: 125 MRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG--LHFV 180
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVLLGIPYD 291
H DL N L+ + +KI DFG S + T Y + R + PE +L +
Sbjct: 181 HRDLATRNCLVG--QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238
Query: 292 LAIDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 239 TESDVWSFGVVLWEIFT 255
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEV-QLLEKINKADIHSRYIVKL 176
LG+GSFG+V + D + Q A+K ++ +EV ++ E + A + S IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 129
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G + + ELL +L LI+ + + + Q L +L + I
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT--RRI 185
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSS-C----HVGQTLYQ--YI-QSRYYRSPEVLLG 287
+H D+K +N+LL S S + DFG + C +G++L YI + + +PEV++G
Sbjct: 186 LHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
P D +D+WS C+++ + G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
++ EI L+GKG FGQV H E VAI++I ++ N+ Q++ E +
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERD--NEDQLKAFKREVMAYRQT 86
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+V G HL ++ L LY+++R+ + +N T++ AQ++ + +
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV-LDVNKTRQIAQEIVKGMGY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQ----YIQSRY--Y 279
L + I+H DLK +N+ + K + I DFG S V Q + IQ+ + +
Sbjct: 146 LHAK--GILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
Query: 280 RSPEVLLG---------IPYDLAIDMWSLGCILVELHTGEPLF 313
+PE++ +P+ D+++LG I ELH E F
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 21/241 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLL 160
G + Y + LG G+FG+V +VA+KI+ +K + + + E+Q L
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFA 218
+ +I+KL + +V E +S L++ I HG V ++
Sbjct: 66 KLFRHP-----HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLF 117
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
QQ+ A+ + ++H DLKPEN+LL + + KI DFG S + G+ L S
Sbjct: 118 QQILSAVDYCHRH--MVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRDSCGS 173
Query: 277 RYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
Y +PEV+ G Y +D+WS G IL L G F ++ KI + P Y
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 336 L 336
L
Sbjct: 234 L 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 446
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
+IVKL G T +N + ++ EL + L + ++ F SL+L +A QL
Sbjct: 447 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 502
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----Y 278
ALA+L S +H D+ N+L+ + +K+ DFG S ++ + Y Y S+
Sbjct: 503 ALAYLESKRF--VHRDIAARNVLVSA--TDCVKLGDFGLSRYMEDSTY-YKASKGKLPIK 557
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
+ +PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 615
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 114 IDTLLGKGSFGQVVKAF--DHE-EKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
++ +LG+G FG+V + +H+ EK VA+K K NK+ F+++A I
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI--------- 62
Query: 165 KADIHSRYIVKLKGHF----TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
++ +IVKL G TW ++ EL Y N + + + ++ Q
Sbjct: 63 MKNLDHPHIVKLIGIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY- 278
+C A+A+L S ++ +H D+ NIL+ SP+ +K+ DFG S ++ + Y+ +R
Sbjct: 118 ICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNE 318
+ SPE + + A D+W + E+ + +P F +N+
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 217
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LG+G++G VV+ H Q+ A+K I+ Q ++ + L I+ + + V
Sbjct: 15 LGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 71
Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
G + + + EL+ +L + G ++ ++ K A + AL L S +LS
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLS 130
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPE----VLLGI 288
+IH D+KP N+L+ + +K+ DFG S ++ + + I + + Y +PE L
Sbjct: 131 VIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
Y + D+WSLG ++EL P S Q+ +++E
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 40/262 (15%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINK 165
+F D YE+ +G GS+ + + A+KII K+K+ + +I ++ + N
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPN- 77
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
I+ LK + ++ +V EL L + I F F+++ A
Sbjct: 78 -------IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF----------FSEREASA 120
Query: 225 LAFLSSPEL------SIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQY 273
+ F + + ++H DLKP NIL S +I+I DFG + + L
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMP 332
+ + +PEVL YD A D+WSLG +L TG P +G + D +I+ +G
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD--DTPEEILARIGSG 238
Query: 333 PGYLLHGASKTSKYFDRLSDNS 354
L G Y++ +SD +
Sbjct: 239 KFSLSGG------YWNSVSDTA 254
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 21/241 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLL 160
G + Y + LG G+FG+V +VA+KI+ +K + + + E+Q L
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFA 218
+ +I+KL + +V E +S L++ I HG V ++
Sbjct: 66 KLFRHP-----HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLF 117
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
QQ+ A+ + ++H DLKPEN+LL + + KI DFG S + G+ L S
Sbjct: 118 QQILSAVDYCHRH--MVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRTSCGS 173
Query: 277 RYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
Y +PEV+ G Y +D+WS G IL L G F ++ KI + P Y
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 336 L 336
L
Sbjct: 234 L 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPY 290
+++H DLKP N+ L + +K+ DFG + H ++ + YY SPE + + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
+ D+WSLGC+L EL P F+ ++ + KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 114 IDTLLGKGSFGQVVKAF--DHE-EKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
++ +LG+G FG+V + +H+ EK VA+K K NK+ F+++A I
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI--------- 66
Query: 165 KADIHSRYIVKLKGHF----TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
++ +IVKL G TW ++ EL Y N + + + ++ Q
Sbjct: 67 MKNLDHPHIVKLIGIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 121
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY- 278
+C A+A+L S ++ +H D+ NIL+ SP+ +K+ DFG S ++ + Y+ +R
Sbjct: 122 ICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNE 318
+ SPE + + A D+W + E+ + +P F +N+
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 221
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 114 IDTLLGKGSFGQVVKAF--DHE-EKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
++ +LG+G FG+V + +H+ EK VA+K K NK+ F+++A I
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI--------- 78
Query: 165 KADIHSRYIVKLKGHF----TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
++ +IVKL G TW ++ EL Y N + + + ++ Q
Sbjct: 79 MKNLDHPHIVKLIGIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 133
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY- 278
+C A+A+L S ++ +H D+ NIL+ SP+ +K+ DFG S ++ + Y+ +R
Sbjct: 134 ICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNE 318
+ SPE + + A D+W + E+ + +P F +N+
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 233
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPY 290
+++H DLKP N+ L + +K+ DFG + H ++ + YY SPE + + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
+ D+WSLGC+L EL P F+ ++ + KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSR 171
LG+G+FG+V A H ++K VA+K +K Q Q E +LL + +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH-----Q 74
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG----------------VSLNLTK 215
+IV+ G T L +VFE + + +L R HG + L
Sbjct: 75 HIVRFFGVCTEGRPLLMVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
A Q+ + +L+ L +H DL N L+ + +KI DFG S + T Y +
Sbjct: 133 AVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
R + PE +L + D+WS G +L E+ T
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEV-QLLEKINKADIHSRYIVKL 176
+G+GSFG+V + D + Q A+K ++ +EV ++ E + A + S IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 115
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G + + ELL +L LI+ + + + Q L +L + I
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT--RRI 171
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSS-C----HVGQTLYQ--YI-QSRYYRSPEVLLG 287
+H D+K +N+LL S S + DFG + C +G++L YI + + +PEV++G
Sbjct: 172 LHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
P D +D+WS C+++ + G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSR 171
LG+G+FG+V A H ++K VA+K +K Q Q E +LL + +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH-----Q 80
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG----------------VSLNLTK 215
+IV+ G T L +VFE + + +L R HG + L
Sbjct: 81 HIVRFFGVCTEGRPLLMVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
A Q+ + +L+ L +H DL N L+ + +KI DFG S + T Y +
Sbjct: 139 AVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
R + PE +L + D+WS G +L E+ T
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 46/231 (19%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----VAIKIIK-NKKPF-LNQAQIEVQLLEKINKADIHS 170
LG+G FG+VVKA K + VA+K++K N P L E +L+++N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP---- 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--------------------- 208
+++KL G + L L+ E Y +L +R + G
Sbjct: 87 -HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 209 -VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
+++ FA Q+ + +L+ E+S++H DL NIL+ ++ +KI DFG S V
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 268 Q--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ + + Q R + + E L Y D+WS G +L E+ T G P
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
+G GSFG V K H + VA+K++ P Q Q EV +L K +I +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 67
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
G+ T L +V + +LY+ I T F + L A+Q + +L +
Sbjct: 68 LFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 123
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
SIIH DLK NI L + +KI DFG S Q S + +PEV+
Sbjct: 124 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
PY D+++ G +L EL TG+ +S N DQ II ++G GYL SK
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 234
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
K RL + LKK D R
Sbjct: 235 RSNCPKAMKRLM--AECLKKKRDER 257
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 19/234 (8%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL---NQAQI--EVQLLE 161
K + +Y + LLG+GS+G+V + D E C+ A+KI+K KK +A + E+QLL
Sbjct: 2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
++ ++ V K + +V E + ++ + + + QL
Sbjct: 62 RLRHKNVIQLVDVLYNEE---KQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH---VGQTLYQYIQSRY 278
L +L S I+H D+KP N+LL + I + + H T S
Sbjct: 119 IDGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 279 YRSPEVLLGIPY--DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
++ PE+ G+ +D+WS G L + TG F G D + K+ E +G
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIG 226
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEV-QLLEKINKADIHSRYIVKL 176
+G+GSFG+V + D + Q A+K ++ +EV ++ E + A + S IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 131
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G + + ELL +L LI+ + + + Q L +L + I
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT--RRI 187
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSS-C----HVGQTLYQ--YI-QSRYYRSPEVLLG 287
+H D+K +N+LL S A + DFG + C +G++L YI + + +PEV++G
Sbjct: 188 LHGDVKADNVLLSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
P D +D+WS C+++ + G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 48/232 (20%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----VAIKIIK-NKKPF-LNQAQIEVQLLEKINKADIHS 170
LG+G FG+VVKA K + VA+K++K N P L E +L+++N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP---- 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--------------------- 208
+++KL G + L L+ E Y +L +R + G
Sbjct: 87 -HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 209 -VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
+++ FA Q+ + +L+ E+ ++H DL NIL+ ++ +KI DFG S V
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 268 QTLYQYIQSRYYRSPEVLLGIP------YDLAIDMWSLGCILVELHT--GEP 311
+ Y++ R P + I Y D+WS G +L E+ T G P
Sbjct: 202 EE-DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
+IVKL G T +N + ++ EL + L + ++ F SL+L +A QL
Sbjct: 67 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 122
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----Y 278
ALA+L S +H D+ N+L+ + +K+ DFG S ++ + Y Y S+
Sbjct: 123 ALAYLESKRF--VHRDIAARNVLVSA--TDCVKLGDFGLSRYMEDSTY-YKASKGKLPIK 177
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
+ +PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAI------KIIKNKKPFLNQAQIEVQLLEKINKAD 167
D +G+GSF V K D E +VA K+ K+++ + ++ L+ N
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFEL-LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
+ + +KG K + LV EL S L ++ F + + + + +Q+ L
Sbjct: 90 FYDSWESTVKG----KKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLRSWCRQILKGLQ 143
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRYYRSPEVL 285
FL + IIH DLK +NI + P S +KI D G ++ I + + +PE
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASFAKAVIGTPEFXAPEXY 202
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
YD ++D+++ G +E T E +S Q+ + + G+ P
Sbjct: 203 EE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV-TSGVKPA 249
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LGKG F + + D + K A KI+ K L Q E +E + +++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G F + + +V EL +L L + ++ + + +Q+ +L +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
IH DLK N+ L + +KI DFG + V G+ + Y +PEVL +
Sbjct: 139 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 293 AIDMWSLGCILVELHTGEPLF 313
+D+WS+GCI+ L G+P F
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+ +LG GS G VV + + +++ + F + A +E++LL ++D H ++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLL---TESDDHPN-VI 90
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
+ T L + EL + NL +L+ + N +L L K++ +Q+ +A L
Sbjct: 91 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
S L IIH DLKP+NIL+ + R I I DFG GQ ++
Sbjct: 151 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 274 --IQSRYYRSPEVL---LGIPYDLAIDMWSLGCIL 303
+ +R+PE+L +ID++S+GC+
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 405 DLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
DLI +M+ +DP KR + VLRH F S
Sbjct: 288 DLISQMIDHDPLKRPTAMKVLRHPLFWPKS 317
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+ +LG GS G VV + + +++ + F + A +E++LL ++D H ++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLL---TESDDHPN-VI 90
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
+ T L + EL + NL +L+ + N +L L K++ +Q+ +A L
Sbjct: 91 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
S L IIH DLKP+NIL+ + R I I DFG GQ ++
Sbjct: 151 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 274 --IQSRYYRSPEVL---LGIPYDLAIDMWSLGCIL 303
+ +R+PE+L +ID++S+GC+
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 405 DLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
DLI +M+ +DP KR + VLRH F S
Sbjct: 288 DLISQMIDHDPLKRPTAMKVLRHPLFWPKS 317
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LGKG F + + D + K A KI+ K L Q E +E + +++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G F + + +V EL +L L + ++ + + +Q+ +L +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
IH DLK N+ L + +KI DFG + V G+ + Y +PEVL +
Sbjct: 139 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 293 AIDMWSLGCILVELHTGEPLF 313
+D+WS+GCI+ L G+P F
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LGKG F + + D + K A KI+ K L Q E +E + +++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G F + + +V EL +L L + ++ + + +Q+ +L +
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 142
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
IH DLK N+ L + +KI DFG + V G+ + Y +PEVL +
Sbjct: 143 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 293 AIDMWSLGCILVELHTGEPLF 313
+D+WS+GCI+ L G+P F
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPF 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+GKG FG V+ D+ +VA+K IKN + FL +A + QL HS +
Sbjct: 20 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 69
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L K L +V E ++ +L + +R+ + + KF+ +C A+ +L
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 127
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
+ +H DL N+L+ + + K+ DFG + T + +PE L +
Sbjct: 128 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+++
Sbjct: 186 SDVWSFGILLWEIYS 200
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LGKG F + + D + K A KI+ K L Q E +E + +++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G F + + +V EL +L L + ++ + + +Q+ +L +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 162
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
IH DLK N+ L + +KI DFG + V G+ + Y +PEVL +
Sbjct: 163 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 293 AIDMWSLGCILVELHTGEPLF 313
+D+WS+GCI+ L G+P F
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPF 241
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LGKG F + + D + K A KI+ K L Q E +E + +++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G F + + +V EL +L L + ++ + + +Q+ +L +
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 160
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
IH DLK N+ L + +KI DFG + V G+ + Y +PEVL +
Sbjct: 161 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 293 AIDMWSLGCILVELHTGEPLF 313
+D+WS+GCI+ L G+P F
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPF 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LGKG F + + D + K A KI+ K L Q E +E + +++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G F + + +V EL +L L + ++ + + +Q+ +L +
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 136
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
IH DLK N+ L + +KI DFG + V G+ + Y +PEVL +
Sbjct: 137 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 293 AIDMWSLGCILVELHTGEPLF 313
+D+WS+GCI+ L G+P F
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPF 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+GKG FG V+ D+ +VA+K IKN + FL +A + QL HS +
Sbjct: 29 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 78
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L K L +V E ++ +L + +R+ + + KF+ +C A+ +L
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 136
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
+ +H DL N+L+ + + K+ DFG + T + +PE L +
Sbjct: 137 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+++
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+ +LG GS G VV + + VA+K + F + A +E++LL ++D H ++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGR-PVAVK--RMLIDFCDIALMEIKLL---TESDDHPN-VI 72
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
+ T L + EL + NL +L+ + N +L L K++ +Q+ +A L
Sbjct: 73 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
S L IIH DLKP+NIL+ + R I I DFG GQ+ ++
Sbjct: 133 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 274 --IQSRYYRSPEVL-----LGIPYDL--AIDMWSLGCIL 303
+ +R+PE+L L L +ID++S+GC+
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 405 DLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
DLI +M+ +DP KR + VLRH F S
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLFWPKS 303
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 46/231 (19%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----VAIKIIK-NKKPF-LNQAQIEVQLLEKINKADIHS 170
LG+G FG+VVKA K + VA+K++K N P L E +L+++N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP---- 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--------------------- 208
+++KL G + L L+ E Y +L +R + G
Sbjct: 87 -HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 209 -VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
+++ FA Q+ + +L+ E+ ++H DL NIL+ ++ +KI DFG S V
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 268 Q--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ + + Q R + + E L Y D+WS G +L E+ T G P
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
+RY + +G GSFG + D +VAIK+ +K K P Q IE KI K
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---QLHIE----SKIYKMM 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
I ++ ++ +V ELL +L +L N SL A Q+ + +
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEY 120
Query: 228 LSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG-SSCHVGQTLYQYIQSR-------- 277
+ S + IH D+KP+N L+ K+ + IIDFG + + +Q+I R
Sbjct: 121 IHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-----------QMTKI 325
Y S LGI D+ SLG +L+ + G + G +M+
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238
Query: 326 IEVL--GMPPGYLLHGASKTSKYFDRLSDNSYV 356
IEVL G P + + S FD D SY+
Sbjct: 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKIN 164
++L +E LG+G FG V +A + + C AIK I+ N++ + EV+ L K+
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 165 KADIHSRYIVKLKGHFTWK-------------NHLCLVFELLSYNLYNLIRNTNFHGVSL 211
I + L+ + T K LC L + V L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---------- 261
++ + A+ A+ FL S ++H DLKP NI +K+ DFG
Sbjct: 122 HIFLQIAE----AVEFLHSK--GLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEE 173
Query: 262 ----------SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP 311
+ H GQ + ++ Y SPE + G Y +D++SLG IL EL
Sbjct: 174 EQTVLTPMPAYARHTGQ-----VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL----- 223
Query: 312 LFSGKNEVDQMTKIIEV--LGMPP 333
L+ +++++ + +V L PP
Sbjct: 224 LYPFSTQMERVRTLTDVRNLKFPP 247
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 39/219 (17%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+ +LG GS G VV + + VA+K + F + A +E++LL ++D H ++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGR-PVAVK--RMLIDFCDIALMEIKLL---TESDDHPN-VI 72
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
+ T L + EL + NL +L+ + N +L L K++ +Q+ +A L
Sbjct: 73 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
S L IIH DLKP+NIL+ + R I I DFG GQ ++
Sbjct: 133 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 274 --IQSRYYRSPEVL-----LGIPYDL--AIDMWSLGCIL 303
+ +R+PE+L L L +ID++S+GC+
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 405 DLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
DLI +M+ +DP KR + VLRH F S
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLFWPKS 303
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
LG+G FG+V + +D E QVA+K +K + + A + E+++L +++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR-----NLYHE 83
Query: 172 YIVKLKGHFT--WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
IVK KG T N + L+ E L N + ++L K+A Q+C + +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSR----YYRSPE 283
S + +H DL N+L+ S +KI DFG + + R ++ +PE
Sbjct: 144 SRQY--VHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 284 VLLGIPYDLAIDMWSLGCILVELHT 308
L+ + +A D+WS G L EL T
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
+RY + +G GSFG + D +VAIK+ +K K P Q IE KI K
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---QLHIE----SKIYKMM 59
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
I ++ ++ +V ELL +L +L N SL A Q+ + +
Sbjct: 60 QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEY 118
Query: 228 LSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFG-SSCHVGQTLYQYIQSR-------- 277
+ S + IH D+KP+N L+ K + + IIDFG + + +Q+I R
Sbjct: 119 IHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-----------QMTKI 325
Y S LGI D+ SLG +L+ + G + G +M+
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236
Query: 326 IEVL--GMPPGYLLHGASKTSKYFDRLSDNSYV 356
IEVL G P + + S FD D SY+
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 34/253 (13%)
Query: 105 GEKFLDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
G L R EI L LG G FG VVK + + VA+K+IK ++ E Q + K
Sbjct: 1 GHMELKREEITLLKELGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMK 59
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQ 219
++ H + +VK G + + + +V E +S L N +R+ HG L ++ +
Sbjct: 60 LS----HPK-LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCY 111
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
+C +AFL S + IH DL N L+ + +K+ DFG + +V QY+ S
Sbjct: 112 DVCEGMAFLESHQF--IHRDLAARNCLV--DRDLCVKVSDFGMTRYVLDD--QYVSSVGT 165
Query: 278 ----YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
+ +PEV Y D+W+ G ++ E+ + GK D T VL +
Sbjct: 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS-----LGKMPYDLYTNSEVVLKVSQ 220
Query: 334 GYLL---HGASKT 343
G+ L H AS T
Sbjct: 221 GHRLYRPHLASDT 233
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+GKG FG V+ D+ +VA+K IKN + FL +A + QL HS +
Sbjct: 201 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 250
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L K L +V E ++ +L + +R+ + + KF+ +C A+ +L
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 308
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
+ +H DL N+L+ + + K+ DFG + T + +PE L +
Sbjct: 309 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+++
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-ADIHSRYIVKL 176
LG+GSFG+V + D + Q A+K ++ +EV E++ A + S IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPL 150
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G + + ELL +L L++ + + + Q L +L S I
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHS--RRI 206
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQ--YIQ-SRYYRSPEVLLG 287
+H D+K +N+LL S S + DFG + +G++L YI + + +PEV+LG
Sbjct: 207 LHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
D +D+WS C+++ + G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+GKG FG V+ D+ +VA+K IKN + FL +A + QL HS +
Sbjct: 14 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 63
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
L K L +V E ++ +L + +R+ + + KF+ +C A+ +L
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 121
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
+ +H DL N+L+ + + K+ DFG + T + +PE L +
Sbjct: 122 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+++
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
LG+G FG+V + +D E QVA+K +K + + A + E+++L +++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR-----NLYHE 71
Query: 172 YIVKLKGHFT--WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
IVK KG T N + L+ E L N + ++L K+A Q+C + +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSR----YYRSPE 283
S + +H DL N+L+ S +KI DFG + + R ++ +PE
Sbjct: 132 SRQY--VHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 284 VLLGIPYDLAIDMWSLGCILVELHT 308
L+ + +A D+WS G L EL T
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 67
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 183
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 67
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 127
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 183
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
+R E+ +G+G FG V + VAIK KN + + E L E +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
+IVKL G T +N + ++ EL + L + ++ F SL+L +A QL
Sbjct: 67 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 122
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY---Y 279
ALA+L S +H D+ N+L+ S +K+ DFG S ++ T + + + +
Sbjct: 123 ALAYLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
+PE + + A D+W G + E +H +P F G D + +I E L MPP
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 117 LLGKGSFGQVVKAF---DHEE-KCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADIHSR 171
+LG G+FG V K D E K VAIK+++ N P N+ ++ E A + S
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD----EAYVMAGVGSP 79
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
Y+ +L G + + LV +L+ Y L + +R S +L + Q+ +++L
Sbjct: 80 YVSRLLG-ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLN-WCMQIAKGMSYLE- 136
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRY---YRSPEVL 285
++ ++H DL N+L+ SP +KI DFG + + +T Y + + + E +
Sbjct: 137 -DVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLGMPP 333
L + D+WS G + EL T G + G E+ + + E L PP
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPP 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSRY----------YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
DFG +G+ L ++ Y + SPE + + A D+WS G +L E+ +
Sbjct: 190 DFG----LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 309 -GEPLFSGKNEVDQMTKIIEVLGMPP 333
GE + + D + + E +PP
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPP 271
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 61
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 177
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
LG+G+FG+V A ++K VA+K +K+ +K F +A++ +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL---------LTN 71
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL-------NLTKK--- 216
+ +IVK G + L +VFE + + +L +R V + LT+
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 217 -FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
AQQ+ + +L+S +H DL N L+ + +KI DFG S V T Y +
Sbjct: 132 HIAQQIAAGMVYLASQHF--VHRDLATRNCLV--GENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFS-GKNEVDQMTKIIE 327
+ PE ++ + D+WSLG +L E+ T +P + NEV +
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 247
Query: 328 VLGMP 332
VL P
Sbjct: 248 VLQRP 252
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 60
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 176
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 57
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 58 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 117
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 118 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 173
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 174 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 60
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 176
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 81
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
+H DL N L+ + +K+ DFG S +V Y + S++ + PEVL+
Sbjct: 141 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 289 PYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 197 KFSSKSDIWAFGVLMWEIYS 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-ADIHSRYIVKL 176
LG+GSFG+V + D + Q A+K ++ +EV E++ A + S IV L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPL 131
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
G + + ELL +L L++ + + + Q L +L S I
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHS--RRI 187
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQ--YIQ-SRYYRSPEVLLG 287
+H D+K +N+LL S S + DFG + +G+ L YI + + +PEV+LG
Sbjct: 188 LHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
D +D+WS C+++ + G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 66
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLL 286
+H DL N L+ + +K+ DFG S +V +Y SR + PEVL+
Sbjct: 126 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDD--EYTSSRGSKFPVRWSPPEVLM 179
Query: 287 GIPYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 12 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 61
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
+H DL N L+ + +K+ DFG S +V Y + S++ + PEVL+
Sbjct: 121 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 289 PYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 177 KFSSKSDIWAFGVLMWEIYS 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRN-----TNFHGVSLNLTK 215
I H +V L G T L ++ E + NL +R+ + +L K
Sbjct: 89 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 216 KF--AQQLCC-------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
F + L C + FL+S IH DL NILL +++ +KI DFG +
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFG----L 196
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
+G G FG V + K +VAIK I+ +++ F+ +A++ ++L H + +
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 64
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
V+L G + +CLVFE + + + T + +C +A+L E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 122
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
S+IH DL N L+ + IK+ DFG + V QY S + SPEV
Sbjct: 123 SVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 178
Query: 288 IPYDLAIDMWSLGCILVELHT 308
Y D+WS G ++ E+ +
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 89
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 90 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 149
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 205
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 206 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 124 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S + IH DL NILL +++ +KI DFG +
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 231
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 23 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 72
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 73 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
+H DL N L+ + +K+ DFG S +V Y + S++ + PEVL+
Sbjct: 132 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 289 PYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 188 KFSSKSDIWAFGVLMWEIYS 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 66
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
+H DL N L+ + +K+ DFG S +V Y + S++ + PEVL+
Sbjct: 126 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 289 PYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 16 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 65
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
+H DL N L+ + +K+ DFG S +V Y + S++ + PEVL+
Sbjct: 125 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 289 PYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 181 KFSSKSDIWAFGVLMWEIYS 200
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VAIK + N+A + +E +N+A + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 72
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + ++ EL++ +L + +R N SL+ + A
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H DL N ++ + +KI DFG + + +T Y + +
Sbjct: 133 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ SPE L + D+WS G +L E+ T
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 87 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S + IH DL NILL +++ +KI DFG +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 194
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 117 LLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
LLG+G+F QV +A D + K + +K+ K P+ + I QL+E++ + H
Sbjct: 72 LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW--EFYIGTQLMERLKPSMQH-- 127
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+K ++N LV EL SY N NL +NT + L FA ++ +
Sbjct: 128 MFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQ 187
Query: 228 LSSPELSIIHCDLKPENILLCSP---------KRSAIKIIDFGSSCHV-----GQTLYQY 273
+ E IIH D+KP+N +L + + + +ID G S + G
Sbjct: 188 VHDCE--IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK 245
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCIL 303
++ ++ E+L P++ ID + + +
Sbjct: 246 CETSGFQCVEMLSNKPWNYQIDYFGVAATV 275
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 21 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 74 DNI-----VKYKGVCYSAGRRNLKLIMEFLPYG--SLREYLQKHKERIDHIKLLQYTSQI 126
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 21 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 74 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VAIK + N+A + +E +N+A + +
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 76
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + ++ EL++ +L + +R N SL+ + A
Sbjct: 77 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H DL N ++ + +KI DFG + + +T Y + +
Sbjct: 137 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ SPE L + D+WS G +L E+ T
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 78 IG----HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S + IH DL NILL +++ +KI DFG +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 185
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F D Y + +G GS+ + + + A+K+I K E+++L + +
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEIEILLRYGQ-- 79
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
H I+ LK + H+ LV EL+ L ++R F S + +
Sbjct: 80 -HPN-IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF---SEREASFVLHTIGKTV 134
Query: 226 AFLSSPELSIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYR 280
+L S ++H DLKP NIL S ++I DFG + + L + +
Sbjct: 135 EYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQ--MTKI 325
+PEVL YD D+WSLG +L + G P +G ++ + +T+I
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
F D Y + +G GS+ + + + A+K+I K E+++L + +
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEIEILLRYGQ-- 79
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
H I+ LK + H+ LV EL+ L ++R F S + +
Sbjct: 80 -HPN-IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF---SEREASFVLHTIGKTV 134
Query: 226 AFLSSPELSIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYR 280
+L S ++H DLKP NIL S ++I DFG + + L + +
Sbjct: 135 EYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQ--MTKI 325
+PEVL YD D+WSLG +L + G P +G ++ + +T+I
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 42/214 (19%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 18 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 71 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---- 277
C + +L + IH DL NIL+ + R +KI DFG + + Q ++ + +
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQD-KEFFKVKEPGE 178
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++ + H + +V+L
Sbjct: 21 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ----HDK-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
T + + ++ E ++ +L + +++ V L F+ Q+ +A++ + I
Sbjct: 75 AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK--NYI 132
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDL 292
H DL+ N+L+ + KI DFG + + Y + + +PE + + +
Sbjct: 133 HRDLRAANVLVS--ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 293 AIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
D+WS G +L E+ T G+ + G+ D MT + + MP
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
LGKG+FG V VA+K +++ P + Q E+Q+L+ + HS +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 72
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
IVK +G + + L LV E L S L + ++ H L+ ++ ++ Q+C + +
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 129
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR-YYRS 281
L S +H DL NIL+ S + +KI DFG + + Y+ QS ++ +
Sbjct: 130 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 185
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
PE L + D+WS G +L EL T
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 78 IG----HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S + IH DL NILL +++ +KI DFG +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 185
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 19 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 72 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---- 277
C + +L + IH +L NIL+ + R +KI DFG + + Q Y
Sbjct: 125 CKGMEYLGTKRY--IHRNLATRNILVENENR--VKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 278 --YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 54
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 55 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 114
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N + + +KI DFG
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCXVA--EDFTVKIGDFG 170
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T Y + + + SPE L + D+WS G +L E+ T
Sbjct: 171 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
LGKG+FG V VA+K +++ P + Q E+Q+L+ + HS +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 73
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
IVK +G + + L LV E L S L + ++ H L+ ++ ++ Q+C + +
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 130
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR-YYRS 281
L S +H DL NIL+ S + +KI DFG + + Y+ QS ++ +
Sbjct: 131 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 186
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
PE L + D+WS G +L EL T
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
I+ E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++
Sbjct: 359 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 415
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
+LL + N + + YIV++ G ++ + LV E+ N N H N+
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 473
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
+ Q+ + +L E + +H DL N+LL + + KI DFG S +
Sbjct: 474 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 529
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
QT ++ Y +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 530 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
Query: 325 IIEVLGMPPG 334
E +G P G
Sbjct: 588 KGERMGCPAG 597
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
LGKG+FG V VA+K +++ P + Q E+Q+L+ + HS +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 85
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
IVK +G + + L LV E L S L + ++ H L+ ++ ++ Q+C + +
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 142
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR-YYRS 281
L S +H DL NIL+ S + +KI DFG + + Y+ QS ++ +
Sbjct: 143 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
PE L + D+WS G +L EL T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
LG+G++G VV+ H Q+ A+K I+ Q ++ L I+ + + V
Sbjct: 42 LGRGAYG-VVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDL--DISXRTVDCPFTVTF 98
Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
G + + + EL +L + G ++ ++ K A + AL L S +LS
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLS 157
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPE----VLLGI 288
+IH D+KP N+L+ + +K DFG S ++ + + I + + Y +PE L
Sbjct: 158 VIHRDVKPSNVLINA--LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQK 215
Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
Y + D+WSLG +EL P S Q+ +++E
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGFVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
DFG S + +R + SPE + + A D+WS G +L E+ + GE
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
+ + D + + E +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
I+ E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++
Sbjct: 16 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 72
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
+LL + N + + YIV++ G ++ + LV E+ N N H N+
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 130
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
+ Q+ + +L E + +H DL N+LL + + KI DFG S +
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 186
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
QT ++ Y +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 187 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Query: 325 IIEVLGMPPG 334
E +G P G
Sbjct: 245 KGERMGCPAG 254
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
I+ E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++
Sbjct: 16 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 72
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
+LL + N + + YIV++ G ++ + LV E+ N N H N+
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 130
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
+ Q+ + +L E + +H DL N+LL + + KI DFG S +
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 186
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
QT ++ Y +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 187 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Query: 325 IIEVLGMPPG 334
E +G P G
Sbjct: 245 KGERMGCPAG 254
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
I+ E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++
Sbjct: 358 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 414
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
+LL + N + + YIV++ G ++ + LV E+ N N H N+
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 472
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
+ Q+ + +L E + +H DL N+LL + + KI DFG S +
Sbjct: 473 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 528
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
QT ++ Y +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 529 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
Query: 325 IIEVLGMPPG 334
E +G P G
Sbjct: 587 KGERMGCPAG 596
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLL--EKINK 165
+++ + +G GSFG++ + + +VAIK+ +K K P QLL KI +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---------QLLYESKIYR 57
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
I ++ ++ LV +LL +L +L N +SL A Q+ +
Sbjct: 58 ILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMINRV 116
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG-SSCHVGQTLYQYIQSR------ 277
F+ S S +H D+KP+N L+ +R+ + IIDFG + + + +Q+I R
Sbjct: 117 EFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
Y S LGI D+ SLG +L+ G + G
Sbjct: 175 GTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGAVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
DFG S + +R + SPE + + A D+WS G +L E+ + GE
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
+ + D + + E +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
+G G FG V + K +VAIK IK ++ F+ +A++ ++L H + +
Sbjct: 35 IGSGQFGLVHLGY-WLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL--------SHPK-L 84
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
V+L G + +CLVFE + + + T + +C +A+L E
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 142
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
+IH DL N L+ + IK+ DFG + V QY S + SPEV
Sbjct: 143 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 198
Query: 288 IPYDLAIDMWSLGCILVELHT 308
Y D+WS G ++ E+ +
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFS 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
I+ E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++
Sbjct: 14 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 70
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
+LL + N + + YIV++ G ++ + LV E+ N N H N+
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 128
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
+ Q+ + +L E + +H DL N+LL + + KI DFG S +
Sbjct: 129 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 184
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
QT ++ Y +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 185 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
Query: 325 IIEVLGMPPG 334
E +G P G
Sbjct: 243 KGERMGCPAG 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 21 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 74 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
Y+ E ++ + LG+GSFG V + E + +VAIK + N+A
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 61
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
+ +E +N+A + + +V+L G + ++ EL++ +L + +R
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
N SL+ + A ++ +A+L++ + +H DL N ++ + +KI DFG
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 177
Query: 262 SSCHVGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +T + + SPE L + D+WS G +L E+ T
Sbjct: 178 MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNK-KPFLNQA-QIEVQLLEKINKADIHSR 171
LG+G FG+V + +D VA+K +K P L Q E+++L + +
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-----YHE 70
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
+IVK KG + + + L +L H V L FAQQ+C +A+L +
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
IH L N+LL + + +KI DFG + V + ++Y + R ++ +PE
Sbjct: 131 H--YIHRALAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 185
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
L + A D+WS G L EL T + N+ TK E++G G
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT----YCDSNQSPH-TKFTELIGHTQG 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNK-KPFLNQA-QIEVQLLEKINKADIHSR 171
LG+G FG+V + +D VA+K +K P L Q E+++L + +
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-----YHE 71
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
+IVK KG + + + L +L H V L FAQQ+C +A+L +
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
IH L N+LL + + +KI DFG + V + ++Y + R ++ +PE
Sbjct: 132 H--YIHRALAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
L + A D+WS G L EL T + N+ TK E++G G
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT----YCDSNQSPH-TKFTELIGHTQG 231
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 25 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 78 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 131 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 23 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 76 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 129 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 78 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S + IH DL NILL +++ +KI DFG + +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFGLARDI 189
Query: 267 GQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +R + +PE + Y + D+WS G +L E+ +
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 24 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 77 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 130 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 186 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 49 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 102 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 155 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
ID ++G G FG+V +++ VAIK +K ++ FL +A I Q
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
I++L+G T + +V E + + +L + +R + + L + +
Sbjct: 104 ----DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 158
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
+ +LS ++ +H DL NIL+ S K+ DFG S + +R
Sbjct: 159 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
+ SPE + + A D+WS G +L E+ + GE + + D + + E +PP
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H DL N ++ +KI DFG + + +T Y + +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 18 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 71 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
+G G FG V + K +VAIK I+ +++ F+ +A++ ++L H + +
Sbjct: 18 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 67
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
V+L G + +CLVFE + + + T + +C +A+L E
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 125
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
+IH DL N L+ + IK+ DFG + V QY S + SPEV
Sbjct: 126 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 181
Query: 288 IPYDLAIDMWSLGCILVELHT 308
Y D+WS G ++ E+ +
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
+G G FG V + K +VAIK I+ +++ F+ +A++ ++L H + +
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 64
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
V+L G + +CLVFE + + + T + +C +A+L E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 122
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
+IH DL N L+ + IK+ DFG + V QY S + SPEV
Sbjct: 123 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 178
Query: 288 IPYDLAIDMWSLGCILVELHT 308
Y D+WS G ++ E+ +
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
ID ++G G FG+V +++ VAIK +K ++ FL +A I Q
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 101
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
I++L+G T + +V E + + +L + +R + + L + +
Sbjct: 102 ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 156
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
+ +LS ++ +H DL NIL+ S K+ DFG S + +R
Sbjct: 157 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
+ SPE + + A D+WS G +L E+ + GE + + D + + E +PP
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 269
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 17 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 70 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 123 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
+G G FG V + K +VAIK I+ +++ F+ +A++ ++L H + +
Sbjct: 13 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 62
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
V+L G + +CLVFE + + + T + +C +A+L E
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 120
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
+IH DL N L+ + IK+ DFG + V QY S + SPEV
Sbjct: 121 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 176
Query: 288 IPYDLAIDMWSLGCILVELHT 308
Y D+WS G ++ E+ +
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFS 197
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 22 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 75 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 128 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 18 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 71 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK------- 165
E + +GKG FG V K ++K VAIK + L ++ E +++EK +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQREVFI 76
Query: 166 -ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
++++ IVKL G + + F + +LY+ + + H + ++ + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF-VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQSRYYRS 281
+ ++ + I+H DL+ NI L S +A K+ DFG+S ++ + + + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 282 PEVLLG--IPYDLAIDMWSLGCILVELHTGEPLF 313
PE + Y D +S IL + TGE F
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LGKG+FG V D+ + K+ + + L + E+++L+ + +I
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI---- 91
Query: 173 IVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFL 228
VK KG + + +L L+ E L Y +L H ++ K ++ Q+C + +L
Sbjct: 92 -VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQSR-YYRSP 282
+ IH DL NIL+ + R +KI DFG + + Q + + +S ++ +P
Sbjct: 149 GTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHT 308
E L + +A D+WS G +L EL T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
K E +Y++ LLG G G V + VAIK ++ + P + +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
EV LL+K++ +++L F + L+ E +L++ I T + L
Sbjct: 104 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 158
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
+ F Q+ A+ + ++H D+K ENIL+ R +K+IDFGS + T+Y
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 215
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
+ +R Y PE + Y + +WSLG +L ++ G+ F E+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
ID ++G G FG+V +++ VAIK +K ++ FL +A I Q
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
I++L+G T + +V E + + +L + +R + + L + +
Sbjct: 104 ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 158
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
+ +LS ++ +H DL NIL+ S K+ DFG S + +R
Sbjct: 159 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
+ SPE + + A D+WS G +L E+ + GE + + D + + E +PP
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
LGKG+FG V E C+ VA+K ++ + + L + E+++L+ +
Sbjct: 16 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
+I VK KG + + +L L+ E L Y +L H ++ K ++ Q+
Sbjct: 69 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
C + +L + IH DL NIL+ + R +KI DFG + + Q + + +S
Sbjct: 122 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ +PE L + +A D+WS G +L EL T
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
DFG S + +R + SPE + + A D+WS G +L E+ + GE
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
+ + D + + E +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + ++I DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMRIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 87 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S IH DL NILL +++ +KI DFG + +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFGLARDI 198
Query: 267 GQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +R + +PE + Y + D+WS G +L E+ +
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
DFG S + +R + SPE + + A D+WS G +L E+ + GE
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
+ + D + + E +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LGKG+FG V D+ + K+ + + L + E+++L+ + +I
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI---- 91
Query: 173 IVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFL 228
VK KG + + +L L+ E L Y +L H ++ K ++ Q+C + +L
Sbjct: 92 -VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQSR-YYRSP 282
+ IH DL NIL+ + R +KI DFG + + Q + + +S ++ +P
Sbjct: 149 GTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHT 308
E L + +A D+WS G +L EL T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 141 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 252
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
LG+G FG+V + +D VA+K +K +++ + E+ +L + +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-----YHE 93
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
+I+K KG L + L +L H + L FAQQ+C +A+L +
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSR----YYRSPEVL 285
IH DL N+LL + + +KI DFG + V G Y+ + ++ +PE L
Sbjct: 154 H--YIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
+ A D+WS G L EL L + TK +E++G+ G +
Sbjct: 210 KEYKFYYASDVWSFGVTLYEL-----LTHCDSSQSPPTKFLELIGIAQGQM 255
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 41/266 (15%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSRY----------YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
DFG + + L ++ Y + SPE + + A D+WS G +L E+ +
Sbjct: 190 DFG----LARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 309 -GEPLFSGKNEVDQMTKIIEVLGMPP 333
GE + + D + + E +PP
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPP 271
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 29/262 (11%)
Query: 72 QLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFD 131
QL + + + + G+D + + + L R LG GS+G+V K
Sbjct: 25 QLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSR------LGHGSYGEVFKVRS 78
Query: 132 HEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL 186
E+ A+K ++ PF + EV EK+ + V+L+ + L
Sbjct: 79 KEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPC----CVRLEQAWEEGGIL 132
Query: 187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA--QQLCCALAFLSSPELSIIHCDLKPEN 244
L EL +L ++ G SL + + + ALA L S ++H D+KP N
Sbjct: 133 YLQTELCGPSLQ---QHCEAWGASLPEAQVWGYLRDTLLALAHLHS--QGLVHLDVKPAN 187
Query: 245 ILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR--YYRSPEVLLGIPYDLAIDMWSLGCI 302
I L R K+ DFG +G +Q Y +PE+L G Y A D++SLG
Sbjct: 188 IFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS-YGTAADVFSLGLT 244
Query: 303 LVELHTGEPLFSGKNEVDQMTK 324
++E+ L G Q+ +
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQ 266
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR + LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL----NLTKK 216
I H +V L G T L ++ E + NL +R+ V +L K
Sbjct: 88 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 217 F--AQQLCC-------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
F + L C + FL+S IH DL NILL +++ +KI DFG + +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFGLARDIX 199
Query: 268 Q--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +R + +PE + Y + D+WS G +L E+ +
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 40/227 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVK--AFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR + LG+G+FGQV++ AF ++ VA+K++K + E+++L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL-NLTKKF-- 217
I H +V L G T L ++ E + NL +R+ V +L K F
Sbjct: 87 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 218 -------AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
+ Q+ + FL+S + IH DL NILL +++ +KI DFG + + +
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKIXDFG----LARDI 194
Query: 271 YQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91 DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
D H E+ + K LD ID ++G G FG+V +++ VAIK +K
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
++ FL +A I Q I++L+G T + +V E + + +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
+ +R + + L + + + +LS ++ +H DL NIL+ S K+
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
DFG S + +R + SPE + + A D+WS G +L E+ + GE
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
+ + D + + E +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 78 IG----HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S + IH DL NILL +++ +KI DFG + +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFGLARDI 189
Query: 267 GQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ + +R + +PE + Y + D+WS G +L E+ +
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VAIK + N+A + +E +N+A + +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 70
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + ++ EL++ +L + +R N SL+ + A
Sbjct: 71 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
++ +A+L++ + +H DL N ++ + +KI DFG + + +T +
Sbjct: 131 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIXETDXXRKGGKGL 186
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ SPE L + D+WS G +L E+ T
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG VVK + VAIK+IK ++ F+ +A++ + L H + +
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 81
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V+L G T + + ++ E ++ L N +R H + + +C A+ +L S +
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY---YRSPEVLLGI 288
+H DL N L+ + +K+ DFG S +V + S++ + PEVL+
Sbjct: 141 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYS 196
Query: 289 PYDLAIDMWSLGCILVELHT 308
+ D+W+ G ++ E+++
Sbjct: 197 KFSSKSDIWAFGVLMWEIYS 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
I+ E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++
Sbjct: 6 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 62
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
+LL + N + + YIV++ G ++ + LV E+ N N H N+
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 120
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
+ Q+ + +L E + +H DL N+LL + + KI DFG S +
Sbjct: 121 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 176
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
QT ++ Y +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 177 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
Query: 325 IIEVLGMPPG 334
E +G P G
Sbjct: 235 KGERMGCPAG 244
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
LG+G FG+V + +D VA+K +K +++ + E+ +L + +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-----YHE 76
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
+I+K KG + L + L +L H + L FAQQ+C +A+L S
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
IH +L N+LL + + +KI DFG + V + ++Y + R ++ +PE
Sbjct: 137 H--YIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 191
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
L + A D+WS G L EL L + TK +E++G+ G
Sbjct: 192 LKEYKFYYASDVWSFGVTLYEL-----LTHCDSSQSPPTKFLELIGIAQG 236
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 87 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 198
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+I+ ++G G FG+V +KA +E C VAIK +K E Q E +++A I
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKG-------GYTERQRREFLSEASI 70
Query: 169 HSRY----IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
++ I++L+G T + ++ E + + N ++ + +
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ---------TLYQYIQ 275
+ +L+ E+S +H DL NIL+ S K+ DFG S + + +L I
Sbjct: 131 MRYLA--EMSYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
R+ +PE + + A D WS G ++ E+ + GE + + D + I + +PP
Sbjct: 187 IRWT-APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP 244
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 76
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H DL N ++ +KI DFG + + +T Y + +
Sbjct: 137 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 84 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 195
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 36/273 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
++Y + +G GSFG + + +VAIK+ +K K P Q IE + K+ +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP---QLHIESKFY-KMMQGG 64
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
+ I +K ++ +V ELL +L +L N SL A Q+ + +
Sbjct: 65 VG---IPSIKWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEY 120
Query: 228 LSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG-SSCHVGQTLYQYIQSR-------- 277
+ S + IH D+KP+N L+ K+ + IIDFG + + +Q+I R
Sbjct: 121 IHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-----------QMTKI 325
Y S LGI D+ SLG +L+ + G + G +M+
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238
Query: 326 IEVL--GMPPGYLLHGASKTSKYFDRLSDNSYV 356
IEVL G P + + S FD D SY+
Sbjct: 239 IEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYL 271
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
ID ++G G FG+V +++ VAIK +K ++ FL +A I Q
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 74
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
I++L+G T + +V E + + +L + +R + + L + +
Sbjct: 75 ----DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 129
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----- 278
+ +LS ++ +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 130 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLS----RVLEDDPEAAYTTRGG 181
Query: 279 -----YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
+ SPE + + A D+WS G +L E+ + GE + + D + + E +P
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
Query: 333 P 333
P
Sbjct: 242 P 242
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
LGKG+FG V VA+K +++ P + Q E+Q+L+ + HS +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 69
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
IVK +G + + L LV E L S L + ++ H L+ ++ ++ Q+C + +
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 126
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-----GQTLYQYIQSR-YYRS 281
L S +H DL NIL+ S + +KI DFG + + + + QS ++ +
Sbjct: 127 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
PE L + D+WS G +L EL T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
ID ++G G FG+V +++ VAIK +K ++ FL +A I Q
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 91
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
I++L+G T + +V E + + +L + +R + + L + +
Sbjct: 92 ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 146
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----- 278
+ +LS ++ +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 147 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLS----RVLEDDPEAAYTTRGG 198
Query: 279 -----YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
+ SPE + + A D+WS G +L E+ + GE + + D + + E +P
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 258
Query: 333 P 333
P
Sbjct: 259 P 259
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK-----IIKNKKPFLNQAQIE 156
+K +K+++ Y I L +G F +++ ++ A+K +++ K+ F +
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 157 VQLLEKINK--------ADIHSRYIVKLKGHFTWKNHLCLVFE------LLSYNLYNLIR 202
+ + K + DI + Y + +G T + + +++E +L ++ Y +
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 203 NTNFHG-VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
+ N+ + + + K + + + +++ + E +I H D+KP NIL+ K +K+ DFG
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILM--DKNGRVKLSDFG 197
Query: 262 SSCHV-------GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLG-CILVELHTGEPL 312
S ++ + Y+++ ++ + G +D+WSLG C+ V + P
Sbjct: 198 ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG----AKVDIWSLGICLYVMFYNVVPF 252
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKI 163
++ L YE+ +G G F +V A VAIKI+ L + + E++ L+
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK-- 63
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
++ ++I +L N + +V E L++ I + + +S T+ +Q+
Sbjct: 64 ---NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIV 118
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ----SRY 278
A+A++ S + H DLKPEN+L + +K+IDFG ++Q S
Sbjct: 119 SAVAYVHSQGYA--HRDLKPENLLF--DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 279 YRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
Y +PE++ G Y D+WS+G +L L G F N + KI+
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+I+ ++G G FG+V +KA +E C VAIK +K E Q E +++A I
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKG-------GYTERQRREFLSEASI 68
Query: 169 HSRY----IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
++ I++L+G T + ++ E + + N ++ + +
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ---------TLYQYIQ 275
+ +L+ E+S +H DL NIL+ S K+ DFG S + + +L I
Sbjct: 129 MRYLA--EMSYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
R + +PE + + A D WS G ++ E+ + GE + + D + I + +PP
Sbjct: 185 IR-WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP 242
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 82 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVT--ENNVMKIADFGLARD 193
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
ID ++G G FG+V +++ VAIK +K ++ FL +A I Q
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 74
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
I++L+G T + +V E + + +L + +R + + L + +
Sbjct: 75 ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 129
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
+ +LS ++ +H DL NIL+ S K+ DFG S + +R
Sbjct: 130 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
+ SPE + + A D+WS G +L E+ + GE + + D + + E +PP
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 242
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++A D C+ VA+K++K + E+++L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
I H +V L G T L ++ E + NL +R+ V + +
Sbjct: 87 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
++ Q+ + FL+S IH DL NILL +++ +KI DFG + +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFGLARDI 198
Query: 267 --GQTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 199 YKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 54/246 (21%)
Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
LG+G+FG+V A + ++K VA+K +K+ +K F Q E +LL +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF----QREAELL-----TN 73
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-----------------VS 210
+ +IVK G + L +VFE + + +L + HG +
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHG--DLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
L+ A Q+ + +L+S +H DL N L+ + +KI DFG S V T
Sbjct: 132 LSQMLHIASQIASGMVYLASQHF--VHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTD 187
Query: 271 YQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNEVDQMT 323
Y + + PE ++ + D+WS G IL E+ T +P F N T
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-----T 242
Query: 324 KIIEVL 329
++IE +
Sbjct: 243 EVIECI 248
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 40/227 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVK--AFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR + LG+G+FGQV++ AF ++ VA+K++K + E+++L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL-NLTKKF-- 217
I H +V L G T L ++ E + NL +R+ V +L K F
Sbjct: 87 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 218 AQQLCC-------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
+ L C + FL+S + IH DL NILL +++ +KI DFG + + +
Sbjct: 143 LEHLICYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKICDFG----LARDI 194
Query: 271 YQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
Y+ Y++ R +PE + Y + D+WS G +L E+ +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H DL N ++ +KI DFG + + +T Y + +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+D EI+ L+G G FGQV KA + + +IK K +A+ EV+ L K++ +I
Sbjct: 11 MDFKEIE-LIGSGGFGQVFKA---KHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNI 66
Query: 169 --------HSRYIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKK 216
Y + + ++ +F + + L I + L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYI 274
+Q+ + ++ S +L I+ DLKP NI L K+ +KI DFG +S +
Sbjct: 127 LFEQITKGVDYIHSKKL--INRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGKRXRSK 182
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
+ Y SPE + Y +D+++LG IL EL
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 271 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 325
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 326 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 380 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 28/246 (11%)
Query: 106 EKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLL 160
E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++ +LL
Sbjct: 4 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELL 60
Query: 161 EKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
+ N + + YIV++ G ++ + LV E+ N N H N+ +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVH 118
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLY 271
Q+ + +L E + +H DL N+LL + + KI DFG S + QT
Sbjct: 119 QVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEV 328
++ Y +PE + + D+WS G ++ E + G+ + G +EV M + E
Sbjct: 175 KWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 329 LGMPPG 334
+G P G
Sbjct: 233 MGCPAG 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 44/263 (16%)
Query: 78 TRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHE---- 133
T S+ E YV D Y+Y +K E + E +LG G+FG+V+ A +
Sbjct: 19 TGSSDNEYFYV-----DFREYEYDLKW-EFPRENLEFGKVLGSGAFGKVMNATAYGISKT 72
Query: 134 -EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL 192
QVA+K++K K ++ + + L+ + + H IV L G T + L+FE
Sbjct: 73 GVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHEN-IVNLLGACTLSGPIYLIFEY 130
Query: 193 LSY-NLYNLIRN---------------------TNFHGVSLNLTKKFAQQLCCALAFLSS 230
Y +L N +R+ + + ++ FA Q+ + FL
Sbjct: 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVL 285
S +H DL N+L+ K +KI DFG + + ++ + +PE L
Sbjct: 191 K--SCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 246
Query: 286 LGIPYDLAIDMWSLGCILVELHT 308
Y + D+WS G +L E+ +
Sbjct: 247 FEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V A + + +VA+K +K +E L E + +VKL
Sbjct: 196 LGAGQFGEVWMA-TYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
T K + ++ E ++ +L + +++ L F+ Q+ +AF+ + + I
Sbjct: 250 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRNYI 306
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDL 292
H DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 307 HRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 293 AIDMWSLGCILVELHT 308
D+WS G +L+E+ T
Sbjct: 365 KSDVWSFGILLMEIVT 380
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 18/192 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V A + + +VA+K +K +E L E + +VKL
Sbjct: 190 LGAGQFGEVWMA-TYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
T K + ++ E ++ +L + +++ L F+ Q+ +AF+ + + I
Sbjct: 244 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRNYI 300
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDM 296
H DL+ NIL+ + KI DFG + VG + +PE + + + D+
Sbjct: 301 HRDLRAANILVSA--SLVCKIADFGLA-RVGAKF-----PIKWTAPEAINFGSFTIKSDV 352
Query: 297 WSLGCILVELHT 308
WS G +L+E+ T
Sbjct: 353 WSFGILLMEIVT 364
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
+R LG G+FG+VV+A + + VA+K++K L + + + L+ ++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 104
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK-------- 215
H IV L G T ++ E Y +L N +R + +
Sbjct: 105 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 216 --------KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
F+ Q+ +AFL+S + IH DL NILL + + KI DFG + H+
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARHIK 219
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y D+WS G L EL +
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
+D EI+ L+G G FGQV KA + + +I+ K +A+ EV+ L K++ +I
Sbjct: 12 MDFKEIE-LIGSGGFGQVFKA---KHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNI 67
Query: 169 ----------------------HSRYIVKLKGHFTWKNHLCLVFELL---SYNLYNLIRN 203
S Y + + + CL ++ L I
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
+ L + +Q+ + ++ S +L IH DLKP NI L K+ +KI DFG
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKL--IHRDLKPSNIFLVDTKQ--VKIGDFGLV 183
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
+S + + Y SPE + Y +D+++LG IL EL
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 28/246 (11%)
Query: 106 EKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLL 160
E +LDR + D LG G+FG V K + + VA+KI+KN+ N ++ +LL
Sbjct: 4 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELL 60
Query: 161 EKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
+ N + + YIV++ G ++ + LV E+ N N H N+ +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVH 118
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLY 271
Q+ + +L E + +H DL N+LL + + KI DFG S + QT
Sbjct: 119 QVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEV 328
++ Y +PE + + D+WS G ++ E + G+ + G +EV M + E
Sbjct: 175 KWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 329 LGMPPG 334
+G P G
Sbjct: 233 MGCPAG 238
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 88 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 199
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 46/230 (20%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF------------------- 149
L++Y + +GKGS+G V A++ + A+K++ KK
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 150 --------LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN--HLCLVFELLSYNLYN 199
+ Q E+ +L+K++ ++ VKL N HL +VFEL+ N
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNV-----VKLVEVLDDPNEDHLYMVFELV--NQGP 124
Query: 200 LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID 259
++ +S + + + Q L + +L + IIH D+KP N+L+ + IKI D
Sbjct: 125 VMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVG--EDGHIKIAD 180
Query: 260 FGSSCHVGQT---LYQYIQSRYYRSPEVL---LGIPYDLAIDMWSLGCIL 303
FG S + L + + + +PE L I A+D+W++G L
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 129 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 240
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 77 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 188
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 88 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 199
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 31 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 84
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 142
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 143 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 201 SDVWSFGILLTEIVT 215
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 54/258 (20%)
Query: 112 YEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIK-IIKNKKPFLNQAQIEVQLLEKINK 165
++I+ +G+G+F V A EEK +A+K +I P A E+Q L
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEK--IALKHLIPTSHPIRIAA--ELQCLTVAGG 78
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
D ++ +K F +H+ + L + + I N+ +S +++ L AL
Sbjct: 79 QD----NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKAL 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------------------------ 261
+ + I+H D+KP N L + + ++DFG
Sbjct: 131 KRIH--QFGIVHRDVKPSNFLY-NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQER 187
Query: 262 ---SSCHVGQTLYQYIQSRY----YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGE-PL 312
+ C + + Q + R +R+PEVL P AIDMWS G I + L +G P
Sbjct: 188 CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 313 FSGKNEVDQMTKIIEVLG 330
+ +++ + +I+ + G
Sbjct: 248 YKASDDLTALAQIMTIRG 265
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 80 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 191
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ E S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 37/213 (17%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAI--KIIK----NKKPFLNQAQIEVQLLEKINKADIHS 170
+LGKG FGQ +K H E +V + ++I+ ++ FL + ++ ++ LE N
Sbjct: 17 VLGKGCFGQAIKV-THRETGEVMVMKELIRFDEETQRTFLKEVKV-MRCLEHPN------ 68
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
++K G L + E + I + + FA+ + +A+L S
Sbjct: 69 --VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTL----------------YQY 273
++IIH DL N L+ K + + DFG + V + Y
Sbjct: 127 --MNIIHRDLNSHNCLVRENKN--VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
+ + Y+ +PE++ G YD +D++S G +L E+
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 81 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 192
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 16 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 69
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 127
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 128 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 186 SDVWSFGILLTEIVT 200
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
LG+G FG+V + +D VA+K +K +++ + E+ +L + +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-----YHE 76
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
+I+K KG + L + L +L H + L FAQQ+C +A+L +
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
IH +L N+LL + + +KI DFG + V + ++Y + R ++ +PE
Sbjct: 137 H--YIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 191
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
L + A D+WS G L EL L + TK +E++G+ G
Sbjct: 192 LKEYKFYYASDVWSFGVTLYEL-----LTHCDSSQSPPTKFLELIGIAQG 236
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 26 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 79
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 137
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 138 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 196 SDVWSFGILLTEIVT 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V A + + +VA+K +K +E L E + +VKL
Sbjct: 23 LGAGQFGEVWMA-TYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
T K + ++ E ++ +L + +++ L F+ Q+ +AF+ + + I
Sbjct: 77 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRNYI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDL 292
H DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 134 HRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 293 AIDMWSLGCILVELHT 308
D+WS G +L+E+ T
Sbjct: 192 KSDVWSFGILLMEIVT 207
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 27 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 80
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 138
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 139 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
+ I K + I+ L G T L ++ E S NL ++ G+ S N +
Sbjct: 88 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-- 263
+QL CA + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 199
Query: 264 CHVGQTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
H + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
D+ + LG+G+FGQVV A D + E VA+K++K+ + L+ E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
+ I K + I+ L G T L ++ S NL +R G+ +
Sbjct: 95 KMIGK----HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
+T K QL + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 242
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 243 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 297 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK------- 165
E + +GKG FG V K ++K VAIK + L ++ E +++EK +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQREVFI 76
Query: 166 -ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
++++ IVKL G + + F + +LY+ + + H + ++ + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF-VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQSRYYRS 281
+ ++ + I+H DL+ NI L S +A K+ DFG S ++ + + + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 282 PEVLLG--IPYDLAIDMWSLGCILVELHTGEPLF 313
PE + Y D +S IL + TGE F
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 242
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 243 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 297 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 242
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 243 QLYAV------VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 297 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 41/234 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN----------------LYNLIRNT 204
+ I K + I+ L G T L ++ E S YN N
Sbjct: 88 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 205 NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
S +L A Q+ + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 144 EEQLSSKDLVS-CAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLAR 198
Query: 265 HVGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++KI +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKIRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 28/244 (11%)
Query: 108 FLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
+LDR + D LG G+FG V K + + VA+KI+KN+ N ++ +LL +
Sbjct: 2 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAE 58
Query: 163 IN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
N + + YIV++ G ++ + LV E+ N N H N+ + Q+
Sbjct: 59 ANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQV 116
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLYQY 273
+ +L E + +H DL N+LL + + KI DFG S + QT ++
Sbjct: 117 SMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKW 172
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLG 330
Y +PE + + D+WS G ++ E + G+ + G +EV M + E +G
Sbjct: 173 PVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 230
Query: 331 MPPG 334
P G
Sbjct: 231 CPAG 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 41/234 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
DR + LG+G+FGQVV A D ++ +VA+K++K+ + + + E++++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN----------------LYNLIRNT 204
+ I K + I+ L G T L ++ E S YN N
Sbjct: 73 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 205 NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
S +L A Q+ + +L+S + IH DL N+L+ + + +KI DFG +
Sbjct: 129 EEQLSSKDLVS-CAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLAR 183
Query: 265 HVGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 115 DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KADIHSR 171
D LG G+FG V K + + VA+KI+KN+ N ++ +LL + N + +
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNP 66
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
YIV++ G ++ + LV E+ N N H N+ + Q+ + +L
Sbjct: 67 YIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLE-- 122
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLYQYIQSRYYRSPE 283
E + +H DL N+LL + + KI DFG S + QT ++ Y +PE
Sbjct: 123 ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY--APE 178
Query: 284 VLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLGMPPG 334
+ + D+WS G ++ E + G+ + G +EV M + E +G P G
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 232
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 34/225 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVK--AFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEK 162
DR ++ LG+G+FGQV++ AF ++ VA+K++K + E+++L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL---NLTKKF 217
I H +V L G T L ++ E + NL +R+ V +L K F
Sbjct: 89 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 218 ---------AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ 268
+ Q+ + FL+S IH DL NILL +++ +KI DFG + + +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLAS--RKXIHRDLAARNILLS--EKNVVKICDFGLARDIXK 200
Query: 269 --TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 15 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 69
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 70 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 124 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 179
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTT 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
++ +A+L++ + +H DL N ++ +KI DFG + + +T +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
++ +A+L++ + +H DL N ++ +KI DFG + + +T +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKP--FLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K N P FL +AQ+ ++K+ +
Sbjct: 189 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPEAFLQEAQV----MKKLRHEKLV 243
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 244 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + Y Q + +PE
Sbjct: 298 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEA 353
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 74
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
++ +A+L++ + +H DL N ++ +KI DFG + + +T +
Sbjct: 135 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGL 190
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 191 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 78
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H +L N ++ +KI DFG + + +T Y + +
Sbjct: 139 EIADGMAYLNAKKF--VHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
LG+GSFG V + E + +VA+K + N++ + +E +N+A + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
+V+L G + +V EL+++ +L + +R N +L + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
++ +A+L++ + +H +L N ++ +KI DFG + + +T Y + +
Sbjct: 138 EIADGMAYLNAKKF--VHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 41/220 (18%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
LG G+FG+VV+A + +VA+K++K+ K+ +++ +I L + N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKK- 216
IV L G T + ++ E Y +L N +R + F + L+ +
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 217 ---FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
F+ Q+ +AFL+S + IH D+ N+LL + + KI DFG + +
Sbjct: 166 LLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYI 221
Query: 274 IQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y + D+WS G +L E+ +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
LG G+FG+VV+A + +VA+K++K+ K+ +++ +I L + N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNT------NFHGVSLNLTK--KF 217
IV L G T + ++ E Y +L N +R G L L F
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
+ Q+ +AFL+S + IH D+ N+LL + + KI DFG + + ++
Sbjct: 166 SSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGN 221
Query: 278 Y-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE + Y + D+WS G +L E+ +
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
+G G FG V + K +VAIK I+ +++ F+ +A++ ++L H + +
Sbjct: 16 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 65
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
V+L G + +CLV E + + + T + +C +A+L E
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 123
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
+IH DL N L+ + IK+ DFG + V QY S + SPEV
Sbjct: 124 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 179
Query: 288 IPYDLAIDMWSLGCILVELHT 308
Y D+WS G ++ E+ +
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFS 200
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 43/222 (19%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
LG G+FG+VV+A + +VA+K++K+ K+ +++ +I L + N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK--------- 216
IV L G T + ++ E Y +L N +R G+ +
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 217 -----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY 271
F+ Q+ +AFL+S + IH D+ N+LL + KI DFG + +
Sbjct: 166 RDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMNDSN 221
Query: 272 QYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y + D+WS G +L E+ +
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 13 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 67
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 68 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 122 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 11 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 65
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 66 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 120 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 175
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 38/142 (26%)
Query: 207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----- 261
HGV L++ + A+ A+ FL S L +H DLKP NI +K+ DFG
Sbjct: 163 HGVCLHIFIQIAE----AVEFLHSKGL--MHRDLKPSNIFFT--MDDVVKVGDFGLVTAM 214
Query: 262 ---------------SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
+ H GQ + ++ Y SPE + G Y +D++SLG IL EL
Sbjct: 215 DQDEEEQTVLTPMPAYATHXGQ-----VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
Query: 307 HTGEPLFSGKNEVDQMTKIIEV 328
L+S +++++ I +V
Sbjct: 270 -----LYSFSTQMERVRIITDV 286
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEK 162
++L +E +G+G FG V +A + + C AIK I+ N++ + EV+ L K
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 60
Query: 163 INKADI 168
+ I
Sbjct: 61 LEHPGI 66
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 17 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 70
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 128
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
+L+ NIL+ + KI DFG + + Y + + +PE + + +
Sbjct: 129 RNLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
LG G FG+V +VAIK +K + + FL +AQI ++K+ + Y
Sbjct: 17 LGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQI----MKKLKHDKLVQLYA 71
Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
V + + +V E ++ +L + +++ + L A Q+ +A++
Sbjct: 72 V------VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE--R 123
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGI 288
++ IH DL+ NIL+ + KI DFG + + Q + +PE L
Sbjct: 124 MNYIHRDLRSANILVGN--GLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 289 PYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
+ + D+WS G +L EL T G + G N + + ++ MP
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 67/319 (21%)
Query: 117 LLGKGSFGQVV--KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
+LG G+ G +V FD+ + VA+K I + + A EVQLL + ++ RY
Sbjct: 31 VLGHGAEGTIVYRGMFDNRD---VAVKRILPE--CFSFADREVQLLRESDEHPNVIRYFC 85
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
K + + EL + L + +F + L QQ LA L S L+
Sbjct: 86 TEKD----RQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQQTTSGLAHLHS--LN 138
Query: 235 IIHCDLKPENILLCSP-KRSAIK--IIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
I+H DLKP NIL+ P IK I DFG + + + SR P G
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF--SRRSGVP----GTEGW 192
Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
+A +M S C +N P Y + S ++ +S
Sbjct: 193 IAPEMLSEDC-------------KEN---------------PTYTVDIFSAGCVFYYVIS 224
Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRML 411
+ S+ KS + L G+ LD + D + ++LI +M+
Sbjct: 225 EGSHPFGKSLQRQANILLGACSLDCL---------------HPEKHEDVIA-RELIEKMI 268
Query: 412 TYDPKKRISPTNVLRHEFF 430
DP+KR S +VL+H FF
Sbjct: 269 AMDPQKRPSAKHVLKHPFF 287
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
LG G+FG+VV+A + +VA+K++K+ K+ +++ +I L + N
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 103
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNT------NFHGVSLNLTK--KF 217
IV L G T + ++ E Y +L N +R G L L F
Sbjct: 104 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
+ Q+ +AFL+S + IH D+ N+LL + + KI DFG + + ++
Sbjct: 158 SSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGN 213
Query: 278 Y-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE + Y + D+WS G +L E+ +
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 131 E--RMNYVHRDLAAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
LG G+FG+VV+A + +VA+K++K+ K+ +++ +I L + N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------NTNFHGVSLNLTKK--- 216
IV L G T + ++ E Y +L N +R T+ N T
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 217 ---FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
F+ Q+ +AFL+S + IH D+ N+LL + + KI DFG + +
Sbjct: 166 LLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYI 221
Query: 274 IQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y + D+WS G +L E+ +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
+R LG G+FG+VV+A + + VA+K++K L + + + L+ ++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 81
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT--------- 214
H IV L G T ++ E Y +L N +R + +
Sbjct: 82 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 215 -------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
F+ Q+ +AFL+S + IH DL NILL + + KI DFG + +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 196
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y D+WS G L EL +
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
+R LG G+FG+VV+A + + VA+K++K L + + + L+ ++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 97
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT--------- 214
H IV L G T ++ E Y +L N +R + +
Sbjct: 98 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 215 -------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
F+ Q+ +AFL+S + IH DL NILL + + KI DFG + +
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 212
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y D+WS G L EL +
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
+R LG G+FG+VV+A + + VA+K++K L + + + L+ ++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 104
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK-------- 215
H IV L G T ++ E Y +L N +R + +
Sbjct: 105 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 216 --------KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
F+ Q+ +AFL+S + IH DL NILL + + KI DFG + +
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 219
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y D+WS G L EL +
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 27 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 80
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 138
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 139 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK------- 165
E + +GKG FG V K ++K VAIK + L ++ E +++EK +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQREVFI 76
Query: 166 -ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
++++ IVKL G + + F + +LY+ + + H + ++ + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF-VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQSRYYRS 281
+ ++ + I+H DL+ NI L S +A K+ DF S ++ + + + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 282 PEVLLG--IPYDLAIDMWSLGCILVELHTGEPLF 313
PE + Y D +S IL + TGE F
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 29 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 82
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 140
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 141 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 199 SDVWSFGILLTEIVT 213
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
+R LG G+FG+VV+A + + VA+K++K L + + + L+ ++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 99
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT--------- 214
H IV L G T ++ E Y +L N +R + +
Sbjct: 100 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 215 -------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
F+ Q+ +AFL+S + IH DL NILL + + KI DFG + +
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 214
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ + +PE + Y D+WS G L EL +
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 23 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 76
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 134
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 135 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 193 SDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 30 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 83
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 141
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 142 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 200 SDVWSFGILLTEIVT 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G FG+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 22 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 75
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 133
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 134 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 192 SDVWSFGILLTEIVT 206
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 24/199 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSR 171
+G+G+FG+V + VA+K + P FL +A+I L++ + +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI----LKQYSHPN---- 173
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
IV+L G T K + +V EL+ + T + + + + +L S
Sbjct: 174 -IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVLL 286
IH DL N L+ +++ +KI DFG S +Y + +PE L
Sbjct: 233 --CCIHRDLAARNCLVT--EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 287 GIPYDLAIDMWSLGCILVE 305
Y D+WS G +L E
Sbjct: 289 YGRYSSESDVWSFGILLWE 307
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 49/233 (21%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
G+ +YE+ + G G + A D N +P +
Sbjct: 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRN----------VNGRPV-------------VL 111
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-------------VSL 211
K +HS + L V ++N + +T+ HG SL
Sbjct: 112 KGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL 171
Query: 212 NLTKKFAQQLCCALAFLSS--PELSIIHC------DLKPENILLCSPKRSAIKIIDFGSS 263
+K + A+A+L P LS +H DLKPENI+L + +K+ID G+
Sbjct: 172 KRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ---LKLIDLGAV 228
Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK 316
+ Y Y + +++PE++ P +A D++++G L L P +G+
Sbjct: 229 SRINSFGYLY-GTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGR 279
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 19 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E ++ +L + ++ + L + Q+ +A++
Sbjct: 74 QLYAV------VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Y Q + +PE
Sbjct: 128 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 183
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 12 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 66
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 67 QLYAV------VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Q + +PE
Sbjct: 121 ER--MNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 176
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEK 162
+I+ ++G G FG+V +K E C VAIK +K ++ FL++A I Q
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASIMGQF--- 87
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
I+ L+G T + ++ E + + +L +R + + L + +
Sbjct: 88 ------DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGI 140
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
+ +LS ++S +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 141 GSGMKYLS--DMSAVHRDLAARNILVNS--NLVCKVSDFGMS----RVLEDDPEAAYTTR 192
Query: 279 -------YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLG 330
+ +PE + + A D+WS G ++ E+ + GE + + D + I E
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR 252
Query: 331 MPP 333
+PP
Sbjct: 253 LPP 255
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 22 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E +S +L + ++ + L A Q+ +A++
Sbjct: 77 QLYAV------VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + Q + +PE
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEK 162
+I+ ++G G FG+V +K E C VAIK +K ++ FL++A I Q
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASIMGQF--- 72
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
I+ L+G T + ++ E + + +L +R + + L + +
Sbjct: 73 ------DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGI 125
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
+ +LS ++S +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 126 GSGMKYLS--DMSYVHRDLAARNILVNS--NLVCKVSDFGMS----RVLEDDPEAAYTTR 177
Query: 279 -------YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLG 330
+ +PE + + A D+WS G ++ E+ + GE + + D + I E
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR 237
Query: 331 MPP 333
+PP
Sbjct: 238 LPP 240
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD-I 168
+ + +G G+FG++ + VAIK+ IK++ P Q +E + ++++ + +
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP---QLHLEYRFYKQLSATEGV 62
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y G + +V ELL +L +L + +L A QL + ++
Sbjct: 63 PQVYYFGPXGKYN-----AMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRMEYV 116
Query: 229 SSPELSIIHCDLKPENILLCSP---KRSAIKIIDFG 261
+ S+I+ D+KPEN L+ P ++ AI IIDFG
Sbjct: 117 HTK--SLIYRDVKPENFLVGRPGTKRQHAIHIIDFG 150
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQY---IQSRYYRSPEVLLGIPYDL 292
H D+KPENIL+ + + ++DFG +S + L Q + + YY +PE
Sbjct: 157 HRDVKPENILVSADDFA--YLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 293 AIDMWSLGCILVELHTGEPLFSG 315
D+++L C+L E TG P + G
Sbjct: 215 RADIYALTCVLYECLTGSPPYQG 237
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEK 162
+I+ ++G G FG+V +K E C VAIK +K ++ FL++A I Q
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASIMGQF--- 66
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
I+ L+G T + ++ E + + +L +R + + L + +
Sbjct: 67 ------DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGI 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
+ +LS ++S +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 120 GSGMKYLS--DMSYVHRDLAARNILVNS--NLVCKVSDFGMS----RVLEDDPEAAYTTR 171
Query: 279 -------YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLG 330
+ +PE + + A D+WS G ++ E+ + GE + + D + I E
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR 231
Query: 331 MPP 333
+PP
Sbjct: 232 LPP 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
++ LG+G FG+V +VAIK +K + + FL +AQ+ ++K+ +
Sbjct: 19 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y V + + +V E ++ +L + ++ + L + Q+ +A++
Sbjct: 74 QLYAVVSE------EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
++ +H DL+ NIL+ + K+ DFG + + + Q + +PE
Sbjct: 128 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEA 183
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
L + + D+WS G +L EL T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 185 HLCLVFELLSY-NLYNLI-RNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKP 242
H L+ + Y +LYN++ TNF V + KFA + +AFL + E I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNS 141
Query: 243 ENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL---AIDMWSL 299
++++ + I + D S +Y + + +PE L P D + DMWS
Sbjct: 142 RSVMIDEDMTARISMADVKFSFQSPGRMY----APAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 300 GCILVELHTGEPLFSGKNEVDQMTKI-IEVL--GMPPGYLLH 338
+L EL T E F+ + ++ K+ +E L +PPG H
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH 239
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 117 LLGKGSFGQVVKAFDHEE--KCQVAIKIIKN--KKPFLNQAQIEVQLLEKINKADIHSRY 172
++G+G+FGQV+KA ++ + AIK +K K E+++L K+ H
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPN 87
Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------------NTNFHGVSLNLTKKF 217
I+ L G + +L L E + NL + +R N+ +S F
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
A + + +LS + IH DL NIL+ + KI DFG S GQ + Y++
Sbjct: 148 AADVARGMDYLSQKQF--IHRDLAARNILV--GENYVAKIADFGLS--RGQEV--YVKKT 199
Query: 278 YYRSPEVLLGIP------YDLAIDMWSLGCILVEL 306
R P + I Y D+WS G +L E+
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 117 LLGKGSFGQVVKAFDHEE--KCQVAIKIIKN--KKPFLNQAQIEVQLLEKINKADIHSRY 172
++G+G+FGQV+KA ++ + AIK +K K E+++L K+ H
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPN 77
Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------------NTNFHGVSLNLTKKF 217
I+ L G + +L L E + NL + +R N+ +S F
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
A + + +LS + IH DL NIL+ + KI DFG S GQ + Y++
Sbjct: 138 AADVARGMDYLSQKQF--IHRDLAARNILV--GENYVAKIADFGLS--RGQEV--YVKKT 189
Query: 278 YYRSPEVLLGIP------YDLAIDMWSLGCILVEL 306
R P + I Y D+WS G +L E+
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 109
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 167
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 168 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 109
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 167
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 168 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 50/229 (21%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
LG G+FG+VV+A + +VA+K++K+ K+ +++ +I L + N
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 96
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN--TNFHGVSL-------NLTKK 216
IV L G T + ++ E Y +L N +R G SL L K+
Sbjct: 97 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 217 ------------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
F+ Q+ +AFL+S + IH D+ N+LL + + KI DFG +
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLAR 206
Query: 265 HVGQTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ ++ + +PE + Y + D+WS G +L E+ +
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 109
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 167
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 168 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD-I 168
+ + +G G+FG++ + VAIK+ +K++ P Q +E + +++ D I
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP---QLHLEYRFYKQLGSGDGI 67
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y G + +V ELL +L +L + SL A QL + ++
Sbjct: 68 PQVYYFGPCGKYN-----AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 121
Query: 229 SSPELSIIHCDLKPENILLCSP---KRSAIKIIDFG 261
S L I+ D+KPEN L+ P + I IIDFG
Sbjct: 122 HSKNL--IYRDVKPENFLIGRPGNKTQQVIHIIDFG 155
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D + +LG+G FG+V K + VA+K +K ++ + Q + + +E I+ A +H
Sbjct: 38 DNFSNKNILGRGGFGKVYKG-RLADGTLVAVKRLKEERXQGGELQFQTE-VEMISMA-VH 94
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCA--LA 226
R +++L+G LV+ ++ ++ + +R L+ K+ L A LA
Sbjct: 95 -RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 227 FLSSP-ELSIIHCDLKPENILLCSPKRSAI------KIIDFGSSCHVGQTLYQYIQSRYY 279
+L + IIH D+K NILL + + K++D+ HV + I +
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDXHVXXAVRGTIG---H 209
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PE L D++ G +L+EL TG+ F
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
LG G G+V + + +VA+K +K + E L++++ H R +V+L
Sbjct: 21 LGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
T + + + + +L + ++ + +++N A Q+ +AF+ E + IH
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
DL+ NIL+ + KI DFG + + + + +PE + + +
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
++ + +LGKG FG V +A +E +VA+K++K + + IE L E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD--IIASSDIEEFLREAACMKE 81
Query: 168 IHSRYIVKLKG---HFTWKNHLCLVFELLSY----NLYNLIRNT----NFHGVSLNLTKK 216
++ KL G K L + +L + +L+ + + N + L +
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYI 274
F + C + +LSS + IH DL N +L + + + DFG S + G Q
Sbjct: 142 FMVDIACGMEYLSSR--NFIHRDLAARNCMLA--EDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 275 QSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG 315
S+ + + E L Y + D+W+ G + E+ T G+ ++G
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 62
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 63 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 120
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 121 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKADIH 169
Y++ +G+GSFG + + + QVAIK ++ P L +LL I
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC--TGIP 69
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
+ Y +G H LV +LL +L +L+ + S+ A+Q+ + S
Sbjct: 70 NVYYFGQEGL-----HNVLVIDLLGPSLEDLL-DLCGRKFSVKTVAMAAKQMLARVQ--S 121
Query: 230 SPELSIIHCDLKPENILLCSPKR---SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
E S+++ D+KP+N L+ P + I ++DFG ++YR P
Sbjct: 122 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG-------------MVKFYRDPVTKQ 168
Query: 287 GIPY 290
IPY
Sbjct: 169 HIPY 172
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKADIH 169
Y++ +G+GSFG + + + QVAIK ++ P L +LL I
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC--TGIP 68
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
+ Y +G H LV +LL +L +L+ + S+ A+Q+ + S
Sbjct: 69 NVYYFGQEGL-----HNVLVIDLLGPSLEDLL-DLCGRKFSVKTVAMAAKQMLARVQ--S 120
Query: 230 SPELSIIHCDLKPENILLCSPKR---SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
E S+++ D+KP+N L+ P + I ++DFG ++YR P
Sbjct: 121 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG-------------MVKFYRDPVTKQ 167
Query: 287 GIPY 290
IPY
Sbjct: 168 HIPY 171
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 81
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 82 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 139
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 140 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSR 171
+G+G+FG+V + VA+K + P FL +A+I L++ + +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI----LKQYSHPN---- 173
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
IV+L G T K + +V EL+ + T + + + + +L S
Sbjct: 174 -IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVLL 286
IH DL N L+ +++ +KI DFG S + + +PE L
Sbjct: 233 --CCIHRDLAARNCLVT--EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 287 GIPYDLAIDMWSLGCILVE 305
Y D+WS G +L E
Sbjct: 289 YGRYSSESDVWSFGILLWE 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 35/241 (14%)
Query: 113 EIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKI 163
+I+ ++G G FG+V + + VAIK +K+ ++ FL++A I Q
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF---- 91
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
++ L+G T + ++ E + + +L + +R + + L + +
Sbjct: 92 -----DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIA 145
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---------SSCHVGQTLYQY 273
+ +L+ +++ +H DL NIL+ S K+ DFG S L
Sbjct: 146 AGMKYLA--DMNYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
I R+ +PE + + A D+WS G ++ E+ + GE + D + I + +P
Sbjct: 202 IPIRW-TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 260
Query: 333 P 333
P
Sbjct: 261 P 261
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 117 LLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
++G G FG+V K +++ VAIK +K E Q ++ + +A I ++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-------AGYTEKQRVDFLGEAGIMGQF 103
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
I++L+G + + ++ E + L +R + L L + + + +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML-RGIAAGMKY 162
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--------- 278
L++ ++ +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 163 LAN--MNYVHRDLAARNILVNS--NLVCKVSDFGLS----RVLEDDPEATYTTSGGKIPI 214
Query: 279 -YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
+ +PE + + A D+WS G ++ E+ T
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 81
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 82 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 139
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 140 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 65
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 66 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 123
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 124 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 238
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 35/267 (13%)
Query: 85 KKYVHNDGHDDENYDYIIKHGEKFLDR--YEIDTLLGKGSFGQVVKA---FDHEEKCQVA 139
K Y+ + ++D N + K LD +I+ ++G G FG+V + VA
Sbjct: 18 KTYIDPETYEDPNR--AVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVA 75
Query: 140 IKIIK------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL 193
IK +K ++ FL +A I Q +V L+G T + +V E +
Sbjct: 76 IKTLKVGYTEKQRRDFLCEASIMGQF---------DHPNVVHLEGVVTRGKPVMIVIEFM 126
Query: 194 SYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
L +R + + L + + + +L+ ++ +H DL NIL+ S
Sbjct: 127 ENGALDAFLRKHDGQFTVIQLVGML-RGIAAGMRYLA--DMGYVHRDLAARNILVNS--N 181
Query: 253 SAIKIIDFGSSCHV---GQTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVEL 306
K+ DFG S + + +Y + + +PE + + A D+WS G ++ E+
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
Query: 307 HT-GEPLFSGKNEVDQMTKIIEVLGMP 332
+ GE + + D + I E +P
Sbjct: 242 MSYGERPYWDMSNQDVIKAIEEGYRLP 268
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
D + +LG+G FG+V K + VA+K +K ++ + Q + + +E I+ A +H
Sbjct: 30 DNFXNKNILGRGGFGKVYKG-RLADGXLVAVKRLKEERTQGGELQFQTE-VEMISMA-VH 86
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCA--LA 226
R +++L+G LV+ ++ ++ + +R L+ K+ L A LA
Sbjct: 87 -RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 227 FL-SSPELSIIHCDLKPENILLCSPKRSAI------KIIDFGSSCHVGQTLYQYIQSRYY 279
+L + IIH D+K NILL + + K++D+ HV + I +
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDXHVXXAVRGXIG---H 201
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
+PE L D++ G +L+EL TG+ F
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-EVQLLEKINKAD 167
LD ++ L+G+G +G V K E V + N++ F+N+ I V L+E N A
Sbjct: 12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIA- 70
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
R+IV T + + + Y +L + + H + + A + LA+
Sbjct: 71 ---RFIVG-DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAY 126
Query: 228 LSSPEL--------SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQ------ 272
L + EL +I H DL N+L+ + I DFG S + G L +
Sbjct: 127 LHT-ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS--DFGLSMRLTGNRLVRPGEEDN 183
Query: 273 ----YIQSRYYRSPEVLLGIPYDL--------AIDMWSLGCILVEL 306
+ + Y +PEVL G +L +DM++LG I E+
Sbjct: 184 AAISEVGTIRYMAPEVLEGA-VNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-------IN 164
Y I +G G +V + + E+K AIK ++N + + Q L+ +N
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-------YVNLEEADNQTLDSYRNEIAYLN 61
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
K HS I++L + ++ +V E + +L + ++ + K + + + A
Sbjct: 62 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 119
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----Y 279
+ + + I+H DLKP N L+ +K+IDFG + + ++ Y
Sbjct: 120 VHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 280 RSPEVLLGIPYD-----------LAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
PE + + D+WSLGCIL + G+ P N++ ++ II+
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 117 LLGKGSFGQVVKAFDHEE--KCQVAIKIIKN--KKPFLNQAQIEVQLLEKINKADIHSRY 172
++G+G+FGQV+KA ++ + AIK +K K E+++L K+ H
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPN 84
Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------------NTNFHGVSLNLTKKF 217
I+ L G + +L L E + NL + +R N+ +S F
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
A + + +LS + IH +L NIL+ + KI DFG S GQ + Y++
Sbjct: 145 AADVARGMDYLSQKQF--IHRNLAARNILV--GENYVAKIADFGLS--RGQEV--YVKKT 196
Query: 278 YYRSPEVLLGIP------YDLAIDMWSLGCILVEL 306
R P + I Y D+WS G +L E+
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 36/212 (16%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
I+ ++G G FG+V + + VAIK +K ++ FL +A I Q
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 80
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
I+ L+G T + +V E + + N ++ + +
Sbjct: 81 ----DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY------ 278
+ +LS ++ +H DL NIL+ S K+ DFG S + L ++ Y
Sbjct: 137 MKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLS----RVLEDDPEAAYTTRGGK 188
Query: 279 ----YRSPEVLLGIPYDLAIDMWSLGCILVEL 306
+ +PE + + A D+WS G ++ E+
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEV 220
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 29/244 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHS 170
+ +LG+G+ V + + AIK+ N FL + E ++L+K+N +I
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN-TNFHGVSLNLTKKFAQQLCCALAFL 228
+ ++ + T H L+ E +LY ++ +N +G+ + + + + L
Sbjct: 72 LFAIEEE---TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 229 SSPELSIIHCDLKPENIL--LCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEV 284
E I+H ++KP NI+ + +S K+ DFG++ + + + Y P++
Sbjct: 129 R--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 285 LLGI--------PYDLAIDMWSLGCILVELHTGE----PLFSGKNEVDQMTKIIEVLGMP 332
Y +D+WS+G TG P + + M KII G P
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII--TGKP 244
Query: 333 PGYL 336
G +
Sbjct: 245 SGAI 248
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 31/239 (12%)
Query: 111 RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLE 161
R I+ ++G G G+V + VAIK +K ++ FL++A I Q +
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-D 108
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
N I++L+G T +V E + + T+ ++ + +
Sbjct: 109 HPN--------IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYI 274
+ +LS +L +H DL N+L+ S K+ DFG S T I
Sbjct: 161 GAGMRYLS--DLGYVHRDLAARNVLVDS--NLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVE-LHTGEPLFSGKNEVDQMTKIIEVLGMP 332
R+ +PE + + A D+WS G ++ E L GE + D ++ + E +P
Sbjct: 217 PIRWT-APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP 274
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 29/246 (11%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADI 168
+ + +LG+G+ V + + AIK+ N FL + E ++L+K+N +I
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNI 69
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN-TNFHGVSLNLTKKFAQQLCCALA 226
+ ++ + T H L+ E +LY ++ +N +G+ + + + +
Sbjct: 70 VKLFAIEEE---TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 227 FLSSPELSIIHCDLKPENIL--LCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSP 282
L E I+H ++KP NI+ + +S K+ DFG++ + + + Y P
Sbjct: 127 HLR--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHP 184
Query: 283 EVLLGI--------PYDLAIDMWSLGCILVELHTGE----PLFSGKNEVDQMTKIIEVLG 330
++ Y +D+WS+G TG P + + M KII G
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII--TG 242
Query: 331 MPPGYL 336
P G +
Sbjct: 243 KPSGAI 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 37/242 (15%)
Query: 111 RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLE 161
R I+ ++G G G+V + VAIK +K ++ FL++A I Q +
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-D 108
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
N I++L+G T +V E + + T+ ++ + +
Sbjct: 109 HPN--------IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
+ +LS +L +H DL N+L+ S K+ DFG S + L + Y
Sbjct: 161 GAGMRYLS--DLGYVHRDLAARNVLVDS--NLVCKVSDFGLS----RVLEDDPDAAYTTT 212
Query: 279 -------YRSPEVLLGIPYDLAIDMWSLGCILVE-LHTGEPLFSGKNEVDQMTKIIEVLG 330
+ +PE + + A D+WS G ++ E L GE + D ++ + E
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR 272
Query: 331 MP 332
+P
Sbjct: 273 LP 274
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD-I 168
+ + +G G+FG++ + VAIK+ +K++ P Q +E + +++ D I
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP---QLHLEYRFYKQLGSGDGI 88
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y G + +V ELL +L +L + SL A QL + ++
Sbjct: 89 PQVYYFGPCGKYN-----AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 142
Query: 229 SSPELSIIHCDLKPENILLCSP---KRSAIKIIDFG 261
S L I+ D+KPEN L+ P + I IIDF
Sbjct: 143 HSKNL--IYRDVKPENFLIGRPGNKTQQVIHIIDFA 176
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---Y 273
++ Q+ + FL+S + IH DL NILL +++ +KI DFG + + +Y+ Y
Sbjct: 196 YSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----LARDIYKDPDY 247
Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ R +PE + Y + D+WS G +L E+ +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKN 145
DR ++ LG+G+FGQV++A D C+ VA+K++K
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 60
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---Y 273
++ Q+ + FL+S IH DL NILL +++ +KI DFG + + +Y+ Y
Sbjct: 203 YSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFG----LARDIYKDPDY 254
Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ R +PE + Y + D+WS G +L E+ +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKN 145
DR ++ LG+G+FGQV++A D C+ VA+K++K
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 67
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---Y 273
++ Q+ + FL+S IH DL NILL +++ +KI DFG + + +Y+ Y
Sbjct: 205 YSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFG----LARDIYKDPDY 256
Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ R +PE + Y + D+WS G +L E+ +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKN 145
DR ++ LG+G+FGQV++A D C+ VA+K++K
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 69
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD-I 168
+ + +G G+FG++ + VAIK+ +K++ P Q +E + +++ D I
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP---QLHLEYRFYKQLGSGDGI 67
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
Y G + +V ELL +L +L + SL A QL + ++
Sbjct: 68 PQVYYFGPCGKYN-----AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 121
Query: 229 SSPELSIIHCDLKPENILLCSP---KRSAIKIIDFG 261
S L I+ D+KPEN L+ P + I IIDF
Sbjct: 122 HSKNL--IYRDVKPENFLIGRPGNKTQQVIHIIDFA 155
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---Y 273
++ Q+ + FL+S + IH DL NILL +++ +KI DFG + + +Y+ Y
Sbjct: 198 YSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----LARDIYKDPDY 249
Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
++ R +PE + Y + D+WS G +L E+ +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKN 145
DR ++ LG+G+FGQV++A D C+ VA+K++K
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 62
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGS---SC-HV-----GQTLYQYIQSR---YYRSPEV 284
H DLKP NILL + + +D GS +C HV TL + R YR+PE+
Sbjct: 157 HRDLKPTNILLGDEGQPVL--MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 285 LLGIPY---DLAIDMWSLGCILVELHTGE 310
+ D D+WSLGC+L + GE
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 46/218 (21%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+GKG +G+V + H E V I ++++ + + +I +L + H + +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLR------HDNILGFIA 69
Query: 178 GHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA------F 227
T +N ++ + Y +LY+ ++ +L + A C LA F
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIF 126
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIK-------------IIDFGSSCHVGQTLYQYI 274
+ + +I H D K N+L+ S + I +D G++ VG
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVG------- 179
Query: 275 QSRYYRSPEVL-LGIPYDL-----AIDMWSLGCILVEL 306
++ Y +PEVL I D D+W+ G +L E+
Sbjct: 180 -TKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---Y 273
++ Q+ + FLSS + IH DL NILL + + +KI DFG + + +Y+ Y
Sbjct: 204 YSFQVARGMEFLSSRK--CIHRDLAARNILLS--ENNVVKICDFG----LARDIYKNPDY 255
Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNEVDQMTKI 325
++ R +PE + Y D+WS G +L E+ + G P + + D +++
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL 315
Query: 326 IEVLGM 331
E + M
Sbjct: 316 REGMRM 321
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 44/241 (18%)
Query: 117 LLGKGSFGQVVKAFDHEE----KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LG G+FG V K E K VAIKI+ +A +E + E + A + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEF-MDEALIMASMDHPH 78
Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
+V+L G + LV +L+ + + + + L + Q+ + +L E
Sbjct: 79 LVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE--E 135
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-------------IQSRYY 279
++H DL N+L+ SP +KI DFG + + +Y ++ +Y
Sbjct: 136 RRLVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK-------NEVDQMTKIIEVLGMP 332
R + D+WS G + EL T F GK E+ + + E L P
Sbjct: 194 RK--------FTHQSDVWSYGVTIWELMT----FGGKPYDGIPTREIPDLLEKGERLPQP 241
Query: 333 P 333
P
Sbjct: 242 P 242
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD--IHSRYI 173
+G G+FG++ + VAIK+ IK++ P Q +E + +++ A + Y
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP---QLHLEYRFYKQLGSAGEGLPQVYY 64
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
G + +V ELL +L +L + +L A QL + ++ S L
Sbjct: 65 FGPXGKYN-----AMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKNL 118
Query: 234 SIIHCDLKPENILL---CSPKRSAIKIIDFG 261
I+ D+KPEN L+ + K I IIDFG
Sbjct: 119 --IYRDVKPENFLIGRQGNKKEHVIHIIDFG 147
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 35/241 (14%)
Query: 113 EIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKI 163
+I+ ++G G FG+V + + VAIK +K+ ++ FL++A I Q
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF---- 65
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
++ L+G T + ++ E + + +L + +R + + L + +
Sbjct: 66 -----DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIA 119
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---------SSCHVGQTLYQY 273
+ +L+ +++ +H L NIL+ S K+ DFG S L
Sbjct: 120 AGMKYLA--DMNYVHRALAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
I R+ +PE + + A D+WS G ++ E+ + GE + D + I + +P
Sbjct: 176 IPIRW-TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 234
Query: 333 P 333
P
Sbjct: 235 P 235
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 117 LLGKGSFGQVVKAFDHEE----KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
+LG G+FG V K E K VAIKI+ +A +E + E + A + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEF-MDEALIMASMDHPH 101
Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
+V+L G + LV +L+ + + + + L + Q+ + +L E
Sbjct: 102 LVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE--E 158
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG 261
++H DL N+L+ SP +KI DFG
Sbjct: 159 RRLVHRDLAARNVLVKSPNH--VKITDFG 185
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV------GQTLYQYIQSRYYRSPEVLLG 287
SI H D K +N+LL S + + DFG + G T Q + +R Y +PEVL G
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLA--DFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEVLEG 199
Query: 288 -IPYD----LAIDMWSLGCILVEL 306
I + L IDM+++G +L EL
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 39/245 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHS 170
LG+ FG+V K E+ VAIK +K+K P + + E L +A +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML-----RARLQH 71
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG----VSLNLTKKFA------- 218
+V L G T L ++F S+ +L+ + + H + T K A
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 219 ---QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
Q+ + +LSS ++H DL N+L+ + +KI D G V Y +
Sbjct: 132 HLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYD--KLNVKISDLGLFREVYAADYYKLL 187
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIE 327
+ +PE ++ + + D+WS G +L E+ + G + G +V +M + +
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 247
Query: 328 VLGMP 332
VL P
Sbjct: 248 VLPCP 252
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 96 ENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI 155
E+Y + E+ + ++ L+G G FG+V K + +VA +K + P +Q
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGV-LRDGAKVA---LKRRTPESSQGIE 80
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLT 214
E + + H ++V L G +N + L+++ + + NL + ++ +S++
Sbjct: 81 EFETEIETLSFCRHP-HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQT-L 270
++ + A +IIH D+K NILL + KI DFG S +GQT L
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILL--DENFVPKITDFGISKKGTELGQTHL 197
Query: 271 YQYIQSRY-YRSPEVLLGIPYDLAIDMWSLGCILVEL 306
++ Y PE + D++S G +L E+
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 39/245 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHS 170
LG+ FG+V K E+ VAIK +K+K P + + E L +A +
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML-----RARLQH 88
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG----VSLNLTKKFA------- 218
+V L G T L ++F S+ +L+ + + H + T K A
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 219 ---QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
Q+ + +LSS ++H DL N+L+ + +KI D G V Y +
Sbjct: 149 HLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYD--KLNVKISDLGLFREVYAADYYKLL 204
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIE 327
+ +PE ++ + + D+WS G +L E+ + G + G +V +M + +
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 264
Query: 328 VLGMP 332
VL P
Sbjct: 265 VLPCP 269
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+GKG +G+V + E V I +++K + + ++ ++ + H + +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR------HENILGFIA 98
Query: 178 GHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA------F 227
T ++ ++ + Y +LY+ ++ T VS + + LA F
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIF 155
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-------IQSRYYR 280
+ + +I H DLK +NIL+ K I D G + Q+ Q + ++ Y
Sbjct: 156 GTQGKPAIAHRDLKSKNILV--KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 281 SPEVL-LGIPYDL-----AIDMWSLGCILVEL 306
+PEVL I D +D+W+ G +L E+
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+GKG +G+V + E V I +++K + + ++ ++ + H + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR------HENILGFIA 69
Query: 178 GHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA------F 227
T ++ ++ + Y +LY+ ++ T VS + + LA F
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIF 126
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-------IQSRYYR 280
+ + +I H DLK +NIL+ K I D G + Q+ Q + ++ Y
Sbjct: 127 GTQGKPAIAHRDLKSKNILV--KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 281 SPEVL-LGIPYDL-----AIDMWSLGCILVEL 306
+PEVL I D +D+W+ G +L E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+GKG +G+V + E V I +++K + + ++ ++ + H + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR------HENILGFIA 69
Query: 178 GHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA------F 227
T ++ ++ + Y +LY+ ++ T VS + + LA F
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIF 126
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-------IQSRYYR 280
+ + +I H DLK +NIL+ K I D G + Q+ Q + ++ Y
Sbjct: 127 GTQGKPAIAHRDLKSKNILV--KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 281 SPEVL-LGIPYDL-----AIDMWSLGCILVEL 306
+PEVL I D +D+W+ G +L E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 32/187 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
+GKG FG+V + E+ V I + ++ + +A+I ++ + +I K
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNK 107
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL------SSP 231
+ TW L LV + + +L N + V++ K A LA L +
Sbjct: 108 DNGTW-TQLWLVSDYHEHG--SLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 164
Query: 232 ELSIIHCDLKPENIL-------------LCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
+ +I H DLK +NIL L SA ID + VG ++
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG--------TKR 216
Query: 279 YRSPEVL 285
Y +PEVL
Sbjct: 217 YMAPEVL 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,973,601
Number of Sequences: 62578
Number of extensions: 542732
Number of successful extensions: 4429
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 1569
Number of HSP's gapped (non-prelim): 1468
length of query: 437
length of database: 14,973,337
effective HSP length: 102
effective length of query: 335
effective length of database: 8,590,381
effective search space: 2877777635
effective search space used: 2877777635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)