BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1173
(498 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189235771|ref|XP_970173.2| PREDICTED: similar to regulator of chromosome condensation
[Tribolium castaneum]
Length = 422
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 184/356 (51%), Positives = 240/356 (67%), Gaps = 16/356 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
GV+L G GD GQLGLGPDV+E+ ALV+ D +V++ GGMHTVCLT++GK+ ++GCN
Sbjct: 37 GVLLVTGAGDCGQLGLGPDVLEKSRPALVQTSDEIVDICAGGMHTVCLTKEGKILSFGCN 96
Query: 97 DEGALGREAEG--DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
DEGALGR EG D+E P V LP K +QI+AGDSHS ALL+DG V+AWG+FRDSHG+M
Sbjct: 97 DEGALGRITEGKEDAESTPGEVELPGKVIQITAGDSHSAALLDDGRVFAWGTFRDSHGNM 156
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
GL G +K P ++ ++KIASGADH V LT+ G + T GCPEQGQLGR ++R +SR
Sbjct: 157 GLTLRGNEKLPYEIIQEVHVIKIASGADHIVFLTNHGEVYTCGCPEQGQLGRTSERGSSR 216
Query: 215 NARRGMSFLEPGEVPLK---RKHIDDVFTGVYNTF--ISSKGSILAFGLNNYSQLGEADS 269
NAR L+P + LK + H D+++ G Y TF ++ K I FGLNNY+QLG
Sbjct: 217 NAR--TKLLQPTIISLKPSLKLHFDNIWAGTYCTFAKVAGKSDIYVFGLNNYNQLGLKSL 274
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
Q + P L K S ++M++S +HH++AL GK YA GR DYGRLGL
Sbjct: 275 APQ-------YLPILSKEFSKYNWSMISSAEHHTIALTENGKTYAIGRKDYGRLGLGKDC 327
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
E +E T IP+L+DKT+ +ACG+ SFA+ +G LYGWGMG QLGNG+E+D
Sbjct: 328 EDASELTEIPALKDKTVVYVACGSSTSFAVTDKGELYGWGMGTNGQLGNGEEEDCF 383
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 190/387 (49%), Gaps = 57/387 (14%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL + ++K+ P +++ IV I +G H V LT G +L+ GC ++G LGRIT+
Sbjct: 48 GQLGLGPDVLEKSRPALVQTSDEIVDICAGGMHTVCLTKEGKILSFGCNDEGALGRITEG 107
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNYSQLGEAD 268
+ PGEV L K I ++ + G + A+G +++ +G
Sbjct: 108 KEDAES-------TPGEVELPGKVIQITAGDSHSAALLDDGRVFAWGTFRDSHGNMGLTL 160
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--- 325
+K H+IK +ASG H + L + G++Y G + G+LG
Sbjct: 161 RGNEKLPYEIIQEVHVIK---------IASGADHIVFLTNHGEVYTCGCPEQGQLGRTSE 211
Query: 326 ----KNVSEPVTEPTPI---PSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLG 377
+N + +PT I PSL+ +I G +FA + + +Y +G+ N QLG
Sbjct: 212 RGSSRNARTKLLQPTIISLKPSLKLH-FDNIWAGTYCTFAKVAGKSDIYVFGLNNYNQLG 270
Query: 378 -------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPV 411
+ + I L GK YA GR DYGRLGL E
Sbjct: 271 LKSLAPQYLPILSKEFSKYNWSMISSAEHHTIALTENGKTYAIGRKDYGRLGLGKDCEDA 330
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+E T IP+L+DKT+ +ACG+ SFA+ +G LYGWGMG QLGNG+E+D EP ++
Sbjct: 331 SELTEIPALKDKTVVYVACGSSTSFAVTDKGELYGWGMGTNGQLGNGEEEDCFEPTYVKS 390
Query: 472 KQLNNYTVLQVASGGQHSVILAKPKPN 498
KQL + V +V++GGQH+VILA N
Sbjct: 391 KQLTDRPVFKVSAGGQHAVILATNSNN 417
>gi|345492280|ref|XP_001603331.2| PREDICTED: regulator of chromosome condensation-like [Nasonia
vitripennis]
Length = 423
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/387 (47%), Positives = 253/387 (65%), Gaps = 20/387 (5%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
+K L K EN K + L+ T GG+VL CGQGD GQLGLG DV+E+ FA+
Sbjct: 9 VKSKLEKAVENDDSKTRLI------LREITTGGIVLACGQGDVGQLGLGEDVLEKTRFAV 62
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAV 123
+ D N+V + GGMH VCLT++GKV T+GCNDEGALGR+ + SE +P V LP +
Sbjct: 63 IPDHTNIVAIAAGGMHNVCLTKEGKVMTFGCNDEGALGRDTSKEGSETVPGFVELPAPVI 122
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADH 183
Q++AGDSHS ALL+DG V+ WGSFRDSHG+MGL + ++ P++++ +KIASGADH
Sbjct: 123 QVTAGDSHSAALLDDGRVFIWGSFRDSHGTMGLLTKDNERFPVEIQLQKKFIKIASGADH 182
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLKR-KH--IDDVF 239
V+L S ++ T GC EQGQLGR+ +R R++R+G++ L PG+V K KH +++++
Sbjct: 183 LVLLDSAKHIYTCGCGEQGQLGRLPERKTDRHSRQGVNQLLSPGQVYFKLGKHVEVENIW 242
Query: 240 TGVYNTFI--SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y TF+ S G I FGLNNYSQ+G + Q F P + K+LS+K +T ++
Sbjct: 243 AGTYATFVKASHSGDIYVFGLNNYSQIGLKGVDKQ-------FHPKVSKTLSNKNWTQIS 295
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
SGQHH++AL+ EGK++ GR +YGRLGL V TE T +P+L+ +A G+ SF
Sbjct: 296 SGQHHTIALDDEGKVFVIGRKEYGRLGLGPVESDATELTSVPTLEQMKCVDVAAGSAQSF 355
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDI 384
A+ G LY WGMG QLG G+E+D+
Sbjct: 356 AVTESGKLYAWGMGTSGQLGTGEEEDV 382
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 153/406 (37%), Gaps = 119/406 (29%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVY 243
+T+ G +L G + GQLG G LE + H + V G++
Sbjct: 31 ITTGGIVLACGQGDVGQLGL------------GEDVLEKTRFAVIPDHTNIVAIAAGGMH 78
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
N ++ +G ++ FG N+ LG S K G+ P ++ + + +G HS
Sbjct: 79 NVCLTKEGKVMTFGCNDEGALGRDTS---KEGSET--VPGFVELPA--PVIQVTAGDSHS 131
Query: 304 LALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
AL +G+++ +G R +G +GL E P+ K IA G +DS
Sbjct: 132 AALLDDGRVFIWGSFRDSHGTMGLLTKD---NERFPVEIQLQKKFIKIASGADHLVLLDS 188
Query: 362 EGVLYGWGMGNGYQLGN---------------------------GKEDDILN-------- 386
+Y G G QLG GK ++ N
Sbjct: 189 AKHIYTCGCGEQGQLGRLPERKTDRHSRQGVNQLLSPGQVYFKLGKHVEVENIWAGTYAT 248
Query: 387 -----SEGKIYAF----------------------------------------------- 394
G IY F
Sbjct: 249 FVKASHSGDIYVFGLNNYSQIGLKGVDKQFHPKVSKTLSNKNWTQISSGQHHTIALDDEG 308
Query: 395 -----GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
GR +YGRLGL V TE T +P+L+ +A G+ SFA+ G LY WGM
Sbjct: 309 KVFVIGRKEYGRLGLGPVESDATELTSVPTLEQMKCVDVAAGSAQSFAVTESGKLYAWGM 368
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
G QLG G+E+D+ P IE KQL + VL+V+ GGQH+++LA P
Sbjct: 369 GTSGQLGTGEEEDVEVPAIIESKQLKDVKVLRVSGGGQHTIVLALP 414
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 37 GVVLTCGQGDTGQLGLGP---DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G+ + G+LGLGP D E + +E + V+V G + +TE GK+Y W
Sbjct: 308 GKVFVIGRKEYGRLGLGPVESDATELTSVPTLEQM-KCVDVAAGSAQSFAVTESGKLYAW 366
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVAL 135
G G LG E D E +P + + K +++S G H++ L
Sbjct: 367 GMGTSGQLGTGEEEDVE-VPAIIESKQLKDVKVLRVSGGGQHTIVL 411
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 37/194 (19%)
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGV 364
+ + G + A G+ D G+LGL E V E T + D T I +IA G
Sbjct: 31 ITTGGIVLACGQGDVGQLGL---GEDVLEKTRFAVIPDHTNIVAIAAG------------ 75
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G + L EGK+ FG +D G LG ++ S+ +E P
Sbjct: 76 --------------GMHNVCLTKEGKVMTFGCNDEGALG-RDTSKEGSETVPGFVELPAP 120
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--LGNGKEDDILEPMKIEGKQLNNYTVLQV 482
+ + G+ S A+ +G ++ WG +G +D+ P++I+ ++ +++
Sbjct: 121 VIQVTAGDSHSAALLDDGRVFIWGSFRDSHGTMGLLTKDNERFPVEIQLQK----KFIKI 176
Query: 483 ASGGQHSVILAKPK 496
ASG H V+L K
Sbjct: 177 ASGADHLVLLDSAK 190
>gi|340709117|ref|XP_003393160.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Bombus terrestris]
Length = 471
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 231/364 (63%), Gaps = 14/364 (3%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
P L+ GGV+L GQGD GQLGLG +V+E+ A V +VV + GGMH VCL +D
Sbjct: 74 PDLRQSAIGGVILVFGQGDVGQLGLGEEVVEKTRPATVPGYQDVVSIAAGGMHNVCLRQD 133
Query: 88 GKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G V T+GCNDEGALGR+ D SE P +V+LP KA+Q++AGDSHS ALLEDG V+AWGS
Sbjct: 134 GGVLTFGCNDEGALGRDTSRDGSETEPDSVDLPGKAIQVTAGDSHSAALLEDGRVFAWGS 193
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
FRDSHG+MGL G ++ P+++ IVKIASGADH V+L G++ T GC EQGQLGR
Sbjct: 194 FRDSHGTMGLTLNGNERFPIEMLPNVKIVKIASGADHLVLLDKNGHIYTCGCGEQGQLGR 253
Query: 207 ITQRSASRNARRGM-SFLEPGEVPL---KRKHIDDVFTGVYNTFIS--SKGSILAFGLNN 260
+ R+ASRN R GM L PG V K+ DD++ G Y TF KG I FGLNN
Sbjct: 254 VAARAASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNN 313
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y Q+G D F P + K+ S K + ++SGQHH++AL+ G+++ GR +Y
Sbjct: 314 YYQIGLKDP-------VTHFHPQISKTFSGKTWRHISSGQHHTIALDDSGQVFVMGRKEY 366
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL + E T +PSL IA G+ SFA+ G LY WGMG+ QLG G+
Sbjct: 367 GRLGLGSNCLDAKELTLVPSLSSFKCIDIAAGSAQSFAVTELGDLYSWGMGSSGQLGTGE 426
Query: 381 EDDI 384
E+D+
Sbjct: 427 EEDV 430
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E ++KT P + +V IA+G H V L G +LT GC ++G LGR T R
Sbjct: 94 GQLGLGEEVVEKTRPATVPGYQDVVSIAAGGMHNVCLRQDGGVLTFGCNDEGALGRDTSR 153
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S EP V L K I ++ + G + A+G +++ +G
Sbjct: 154 DGSET--------EPDSVDLPGKAIQVTAGDSHSAALLEDGRVFAWGSFRDSHGTMG--- 202
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---L 325
+ +GN F I+ L + K +ASG H + L+ G IY G + G+LG
Sbjct: 203 --LTLNGNERF----PIEMLPNVKIVKIASGADHLVLLDKNGHIYTCGCGEQGQLGRVAA 256
Query: 326 KNVSEPVTE---PTPIPSLQDKTITS------IACGNCVSFAID-SEGVLYGWGMGNGYQ 375
+ S P P L + +T I G +FA + +G +Y +G+ N YQ
Sbjct: 257 RAASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNNYYQ 316
Query: 376 LG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE 409
+G +G+ I L+ G+++ GR +YGRLGL +
Sbjct: 317 IGLKDPVTHFHPQISKTFSGKTWRHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGSNCL 376
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
E T +PSL IA G+ SFA+ G LY WGMG+ QLG G+E+D+ P +
Sbjct: 377 DAKELTLVPSLSSFKCIDIAAGSAQSFAVTELGDLYSWGMGSSGQLGTGEEEDVEIPTLV 436
Query: 470 EGKQLNNYTVLQVASGGQHSVILAKPKP 497
+GKQL TV++VA GGQH++ LA P
Sbjct: 437 KGKQLEGKTVIRVAGGGQHTLSLATIHP 464
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLG + ++ K LV L + +++ G + +TE G +Y+WG
Sbjct: 356 GQVFVMGRKEYGRLGLGSNCLDAKELTLVPSLSSFKCIDIAAGSAQSFAVTELGDLYSWG 415
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVAL 135
G LG E D E IP V K ++++ G H+++L
Sbjct: 416 MGSSGQLGTGEEEDVE-IPTLVKGKQLEGKTVIRVAGGGQHTLSL 459
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG------------------LGPDVM 57
P+ K+ + L G + TCG G+ GQLG L P ++
Sbjct: 217 PNVKIVKIASGADHLVLLDKNGHIYTCGCGEQGQLGRVAARAASRNTRHGMGPLLTPGLV 276
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTE--DGKVYTWGCNDEGALGREAEGDSEFIPQT 115
E K +E D + G + E G +Y +G N+ +G + + + F PQ
Sbjct: 277 EFKVTKKLEFDD-----IWAGTYCTFAKEYQKGDIYVFGLNNYYQIGLK-DPVTHFHPQI 330
Query: 116 VNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL-ESVS 172
K IS+G H++AL + G V+ G R +G +GL + L L S+S
Sbjct: 331 SKTFSGKTWRHISSGQHHTIALDDSGQVFVMG--RKEYGRLGLGSNCLDAKELTLVPSLS 388
Query: 173 GI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ IA+G+ +T G+L + G GQLG
Sbjct: 389 SFKCIDIAAGSAQSFAVTELGDLYSWGMGSSGQLG 423
>gi|157116974|ref|XP_001652914.1| regulator of chromosome condensation [Aedes aegypti]
gi|157116976|ref|XP_001652915.1| regulator of chromosome condensation [Aedes aegypti]
gi|108876236|gb|EAT40461.1| AAEL007799-PA [Aedes aegypti]
gi|403182896|gb|EJY57703.1| AAEL007799-PB [Aedes aegypti]
Length = 519
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 192/411 (46%), Positives = 251/411 (61%), Gaps = 36/411 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL+CGQG+ GQLGLG DVME+ AL++ L +VE+ GGMH +CL G+VY++GCN
Sbjct: 40 GNVLSCGQGEVGQLGLGEDVMEKTRPALIDSLKEIVEISAGGMHNLCLNRKGEVYSFGCN 99
Query: 97 DEGALGREA--EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
DEGALGR E SEF P+ + LP ++ISAGDSHS LL DG VYAWGSFRDSHG+M
Sbjct: 100 DEGALGRATADEEGSEFEPRKIQLPAPCLKISAGDSHSACLLNDGRVYAWGSFRDSHGNM 159
Query: 155 GLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL EG ++ P +E V G+ V IASG DH V+L+ G++ T GC EQGQLGRI+ R+A
Sbjct: 160 GLTLEGNKRLP--VEVVPGLKSVDIASGGDHLVVLSENGHVYTVGCAEQGQLGRISTRAA 217
Query: 213 SRNARRGMS-FLEPGEVPLKRKHI--DDVFTGVYNTFISSKGS--ILAFGLNNYSQLG-- 265
S +RRG + L+PG V L+ K + D ++ Y TF + + I AFGLNNY QLG
Sbjct: 218 SGESRRGKTDLLQPGVVTLRGKKVLADAIWASTYCTFFRDRNTAKIFAFGLNNYCQLGIP 277
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
V K F P S +D K +A GQHH+L L ++ K++ GR +YGRLGL
Sbjct: 278 NPSENVVKP----VFVPEQT-SFTDVK--SIAGGQHHTLVLKTDNKVHVIGRKEYGRLGL 330
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-- 383
NV+E TP+ +L DK + I CG SFA+ +G +Y WGMG+ QLG G EDD
Sbjct: 331 GNVTEDAKVVTPVEALADKNVVEICCGESASFAVTDKGEVYAWGMGSNQQLGTGNEDDET 390
Query: 384 ---ILNSEG-------KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+NS+ K+ + G+H + K P EPTP+P + T
Sbjct: 391 TPVQINSKQVQGKRILKVSSGGQHSLFLVEEK----PAKEPTPVPEAKPTT 437
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 196/423 (46%), Gaps = 52/423 (12%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G V + G + G LG + + P ++ K+ V+ISAG H++ L G VY++G
Sbjct: 40 GNVLSCGQGEVGQLGLGEDVMEKTRPALIDSLKEIVEISAGGMHNLCLNRKGEVYSFGC- 98
Query: 148 RDSHGSMGLKG---EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--PEQG 202
+ G++G EG + P K++ + +KI++G H L + G + G G
Sbjct: 99 -NDEGALGRATADEEGSEFEPRKIQLPAPCLKISAGDSHSACLLNDGRVYAWGSFRDSHG 157
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
+G + G L P EV K +D G + +S G + G
Sbjct: 158 NMGLTLE---------GNKRL-PVEVVPGLKSVDIASGGDHLVVLSENGHVYTVGCAEQG 207
Query: 263 QLGE----ADSEVQKSGNTCFFTPHLIKSLSDKKF---TMLASGQHHSLALNSEGKIYAF 315
QLG A S + G T P ++ +L KK + AS + KI+AF
Sbjct: 208 QLGRISTRAASGESRRGKTDLLQPGVV-TLRGKKVLADAIWASTYCTFFRDRNTAKIFAF 266
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
G ++Y +LG+ N SE V +P +P T + SIA G +
Sbjct: 267 GLNNYCQLGIPNPSENVVKPVFVPEQTSFTDVKSIAGGQHHTL----------------- 309
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
+L ++ K++ GR +YGRLGL NV+E TP+ +L DK + I CG
Sbjct: 310 ---------VLKTDNKVHVIGRKEYGRLGLGNVTEDAKVVTPVEALADKNVVEICCGESA 360
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
SFA+ +G +Y WGMG+ QLG G EDD P++I KQ+ +L+V+SGGQHS+ L +
Sbjct: 361 SFAVTDKGEVYAWGMGSNQQLGTGNEDDETTPVQINSKQVQGKRILKVSSGGQHSLFLVE 420
Query: 495 PKP 497
KP
Sbjct: 421 EKP 423
>gi|170053955|ref|XP_001862909.1| regulator of chromosome condensation [Culex quinquefasciatus]
gi|167874379|gb|EDS37762.1| regulator of chromosome condensation [Culex quinquefasciatus]
Length = 473
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 249/413 (60%), Gaps = 35/413 (8%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLT 85
A+PTL G VL+CGQG+ GQLGLG DV E+ AL+ L ++V++ GGMH +CLT
Sbjct: 13 ALPTLS-----GNVLSCGQGEVGQLGLGEDVFEKTRPALIPSLRDIVDISAGGMHNLCLT 67
Query: 86 EDGKVYTWGCNDEGALGREA--EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
G+VY++GCNDEGALGR E SEF P+ + LP ++ISAGDSHS LL DG VYA
Sbjct: 68 RRGEVYSFGCNDEGALGRATADEEGSEFEPRRIELPAPCLKISAGDSHSACLLNDGRVYA 127
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
WGSFRDSHG+MGL EG ++ P+++ V IASG DH V+LT G++ T GC EQGQ
Sbjct: 128 WGSFRDSHGNMGLTLEGNKRLPIEVIPGVKSVDIASGGDHLVILTENGHVYTVGCAEQGQ 187
Query: 204 LGRITQRSASRNARRGMS-FLEPGEVPLKRKHI--DDVFTGVYNTFISSKGS--ILAFGL 258
LGRI+ R+AS +RRG + L+PG V LK K + D ++ Y T+ + + I AFGL
Sbjct: 188 LGRISTRAASGESRRGKTDLLQPGIVTLKGKKVLADAIWASTYCTYFKDRNTAKIFAFGL 247
Query: 259 NNYSQLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
NNY QLG V K F P L S +D K + GQHH+L L ++ K++ G
Sbjct: 248 NNYCQLGIPNPSENVVKP----VFVPELT-SFTDVK--TIDGGQHHTLILKTDNKVHVIG 300
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
R +YGRLGL +VSE TP+P+L DK +T I CG SFAI +G LY WGMG+ QL
Sbjct: 301 RKEYGRLGLGDVSEDAKTVTPVPALADKKVTEICCGESTSFAITDKGELYAWGMGSNQQL 360
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS-----------EPVTEPTPIP 418
G G E+D + + + G+ LK S P E TP+P
Sbjct: 361 GTGNEED---EQTPVQIASKQVQGKRILKVSSGGQHSLFIVEEAPTKEATPVP 410
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 194/425 (45%), Gaps = 50/425 (11%)
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
T G V + G + G LG + + P + + V ISAG H++ L G VY++
Sbjct: 16 TLSGNVLSCGQGEVGQLGLGEDVFEKTRPALIPSLRDIVDISAGGMHNLCLTRRGEVYSF 75
Query: 145 GSFRDSHGSMGLKG---EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--P 199
G + G++G EG + P ++E + +KI++G H L + G + G
Sbjct: 76 GC--NDEGALGRATADEEGSEFEPRRIELPAPCLKISAGDSHSACLLNDGRVYAWGSFRD 133
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
G +G + N R P EV K +D G + ++ G + G
Sbjct: 134 SHGNMGLTLEG----NKRL------PIEVIPGVKSVDIASGGDHLVILTENGHVYTVGCA 183
Query: 260 NYSQLGE----ADSEVQKSGNTCFFTPHLIKSLSDKKF---TMLASGQHHSLALNSEGKI 312
QLG A S + G T P ++ +L KK + AS + KI
Sbjct: 184 EQGQLGRISTRAASGESRRGKTDLLQPGIV-TLKGKKVLADAIWASTYCTYFKDRNTAKI 242
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+AFG ++Y +LG+ N SE V +P +P L T G G
Sbjct: 243 FAFGLNNYCQLGIPNPSENVVKPVFVPELTSFTDVKTIDG------------------GQ 284
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
+ L IL ++ K++ GR +YGRLGL +VSE TP+P+L DK +T I CG
Sbjct: 285 HHTL-------ILKTDNKVHVIGRKEYGRLGLGDVSEDAKTVTPVPALADKKVTEICCGE 337
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
SFAI +G LY WGMG+ QLG G E+D P++I KQ+ +L+V+SGGQHS+ +
Sbjct: 338 STSFAITDKGELYAWGMGSNQQLGTGNEEDEQTPVQIASKQVQGKRILKVSSGGQHSLFI 397
Query: 493 AKPKP 497
+ P
Sbjct: 398 VEEAP 402
>gi|350419275|ref|XP_003492127.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Bombus impatiens]
Length = 468
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/364 (49%), Positives = 230/364 (63%), Gaps = 14/364 (3%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
P L+ GGV+L GQGD GQLGLG +V+E+ A V +VV + GGMH VCL +
Sbjct: 71 PDLRQSATGGVILVFGQGDVGQLGLGEEVVEKTRPATVPGYQDVVSIAAGGMHNVCLRQT 130
Query: 88 GKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G V T+GCNDEGALGR+ D SE P +V+LP KA+Q++AGDSHS ALLEDG V+AWGS
Sbjct: 131 GGVLTFGCNDEGALGRDTSRDGSETEPDSVDLPGKAIQVTAGDSHSAALLEDGRVFAWGS 190
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
FRDSHG+MGL G ++ P+++ IVKIASGADH V+L G++ T GC EQGQLGR
Sbjct: 191 FRDSHGTMGLTLNGNERFPIEMLPNIKIVKIASGADHLVLLDKNGHIYTCGCGEQGQLGR 250
Query: 207 ITQRSASRNARRGM-SFLEPGEVPL---KRKHIDDVFTGVYNTFIS--SKGSILAFGLNN 260
+ R+ASRN R GM L PG V K+ DD++ G Y TF KG I FGLNN
Sbjct: 251 VAARAASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNN 310
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y Q+G D F P + K+ S K + ++SGQHH++AL+ G+++ GR +Y
Sbjct: 311 YYQIGLKDP-------VTHFHPQISKTFSGKTWRHISSGQHHTIALDDSGQVFVMGRKEY 363
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL + E T +PSL IA G+ SFA+ G LY WGMG+ QLG G+
Sbjct: 364 GRLGLGSNCLDAKELTLVPSLSSFKCIDIAAGSAQSFAVTELGDLYSWGMGSSGQLGTGE 423
Query: 381 EDDI 384
E+D+
Sbjct: 424 EEDV 427
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E ++KT P + +V IA+G H V L G +LT GC ++G LGR T R
Sbjct: 91 GQLGLGEEVVEKTRPATVPGYQDVVSIAAGGMHNVCLRQTGGVLTFGCNDEGALGRDTSR 150
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S EP V L K I ++ + G + A+G +++ +G
Sbjct: 151 DGSET--------EPDSVDLPGKAIQVTAGDSHSAALLEDGRVFAWGSFRDSHGTMG--- 199
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---L 325
+ +GN F I+ L + K +ASG H + L+ G IY G + G+LG
Sbjct: 200 --LTLNGNERF----PIEMLPNIKIVKIASGADHLVLLDKNGHIYTCGCGEQGQLGRVAA 253
Query: 326 KNVSEPVTE---PTPIPSLQDKTITS------IACGNCVSFAID-SEGVLYGWGMGNGYQ 375
+ S P P L + +T I G +FA + +G +Y +G+ N YQ
Sbjct: 254 RAASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNNYYQ 313
Query: 376 LG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE 409
+G +G+ I L+ G+++ GR +YGRLGL +
Sbjct: 314 IGLKDPVTHFHPQISKTFSGKTWRHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGSNCL 373
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
E T +PSL IA G+ SFA+ G LY WGMG+ QLG G+E+D+ P +
Sbjct: 374 DAKELTLVPSLSSFKCIDIAAGSAQSFAVTELGDLYSWGMGSSGQLGTGEEEDVEIPTLV 433
Query: 470 EGKQLNNYTVLQVASGGQHSVILAKPKP 497
+GKQL TV++VA GGQH++ LA P
Sbjct: 434 KGKQLEGKTVIRVAGGGQHTLALATIHP 461
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLG + ++ K LV L + +++ G + +TE G +Y+WG
Sbjct: 353 GQVFVMGRKEYGRLGLGSNCLDAKELTLVPSLSSFKCIDIAAGSAQSFAVTELGDLYSWG 412
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVAL 135
G LG E D E IP V K ++++ G H++AL
Sbjct: 413 MGSSGQLGTGEEEDVE-IPTLVKGKQLEGKTVIRVAGGGQHTLAL 456
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG------------------LGPDVM 57
P+ K+ + L G + TCG G+ GQLG L P ++
Sbjct: 214 PNIKIVKIASGADHLVLLDKNGHIYTCGCGEQGQLGRVAARAASRNTRHGMGPLLTPGLV 273
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTE--DGKVYTWGCNDEGALGREAEGDSEFIPQT 115
E K +E D + G + E G +Y +G N+ +G + + + F PQ
Sbjct: 274 EFKVTKKLEFDD-----IWAGTYCTFAKEYQKGDIYVFGLNNYYQIGLK-DPVTHFHPQI 327
Query: 116 VNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL-ESVS 172
K IS+G H++AL + G V+ G R +G +GL + L L S+S
Sbjct: 328 SKTFSGKTWRHISSGQHHTIALDDSGQVFVMG--RKEYGRLGLGSNCLDAKELTLVPSLS 385
Query: 173 GI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ IA+G+ +T G+L + G GQLG
Sbjct: 386 SFKCIDIAAGSAQSFAVTELGDLYSWGMGSSGQLG 420
>gi|321478568|gb|EFX89525.1| hypothetical protein DAPPUDRAFT_206077 [Daphnia pulex]
Length = 404
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 173/356 (48%), Positives = 231/356 (64%), Gaps = 15/356 (4%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
+VL+ GQGD GQLGLGPDV+E+ ALV+ + +V++V+ GGMHTVCLT G++YT+GCND
Sbjct: 1 MVLSMGQGDVGQLGLGPDVLEKSRPALVDKVKDVIDVIAGGMHTVCLTSKGEIYTFGCND 60
Query: 98 EGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EGALGR+ +E SEF P V LP KA ISAGDSH+ ALLEDG + WG+FRDSHG MGL
Sbjct: 61 EGALGRDTSEEGSEFEPGLVKLPGKATLISAGDSHTAALLEDGRCFIWGTFRDSHGPMGL 120
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
G QK P+ + + +IASGADH V L+S G + T GC EQGQLGR+ + ++R
Sbjct: 121 NESGSQKLPVPILEGIPMTQIASGADHLVCLSSDGQVYTCGCAEQGQLGRVAEVFSNRGG 180
Query: 217 RRGMSF-LEPGEVPL----KRKHIDDVFTGVYNTFISSK--GSILAFGLNNYSQLGEADS 269
R+G S+ L P V L +R ID V+TG Y TF +K G I FGLNNY+QLG
Sbjct: 181 RKGKSYLLTPQPVALGKGKRRIVIDSVWTGSYATFARAKETGLIYVFGLNNYNQLGLPSQ 240
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + F P + ++ ++ GQHH+LAL+ G++Y+ GR +YGRLG+ +
Sbjct: 241 DAR-------FQPEVSDGFKGHRWLSISCGQHHTLALDENGQVYSLGRKEYGRLGMGADA 293
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ + PTPIP+LQ + + G VS A+ G+ + WGMG QLG G EDD+L
Sbjct: 294 KDLAIPTPIPALQSQKCVEVTAGESVSLAVTESGMAFSWGMGTNGQLGLGHEDDVL 349
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 186/401 (46%), Gaps = 86/401 (21%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL + ++K+ P ++ V ++ + +G H V LTS+G + T GC ++G LGR T
Sbjct: 11 GQLGLGPDVLEKSRPALVDKVKDVIDVIAGGMHTVCLTSKGEIYTFGCNDEGALGRDTSE 70
Query: 211 SASRNARRGMSFLEPGEVPLKRKH-------------IDDVFTGVYNTFISSKGSILAFG 257
S EPG V L K ++D ++ TF S G + G
Sbjct: 71 EGSE--------FEPGLVKLPGKATLISAGDSHTAALLEDGRCFIWGTFRDSHGPM---G 119
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
LN +SG+ P L T +ASG H + L+S+G++Y G
Sbjct: 120 LN-------------ESGSQKLPVP----ILEGIPMTQIASGADHLVCLSSDGQVYTCGC 162
Query: 318 HDYGRLGLKNVSEPVTE------------PTPIPSLQDK---TITSIACGNCVSFAIDSE 362
+ G+LG V+E + P P+ + K I S+ G+ +FA E
Sbjct: 163 AEQGQLG--RVAEVFSNRGGRKGKSYLLTPQPVALGKGKRRIVIDSVWTGSYATFARAKE 220
Query: 363 -GVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFG 395
G++Y +G+ N QLG +D L+ G++Y+ G
Sbjct: 221 TGLIYVFGLNNYNQLGLPSQDARFQPEVSDGFKGHRWLSISCGQHHTLALDENGQVYSLG 280
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
R +YGRLG+ ++ + PTPIP+LQ + + G VS A+ G+ + WGMG QL
Sbjct: 281 RKEYGRLGMGADAKDLAIPTPIPALQSQKCVEVTAGESVSLAVTESGMAFSWGMGTNGQL 340
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G G EDD+LEP I+GK L N VL ++GGQH+V+LA K
Sbjct: 341 GLGHEDDVLEPTTIKGKALENRLVLLASAGGQHTVLLAADK 381
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGPDVMERK-------------TFALVEDLDNVV--EV 74
L C + G V TCG + GQLG +V + AL + +V V
Sbjct: 148 LVCLSSDGQVYTCGCAEQGQLGRVAEVFSNRGGRKGKSYLLTPQPVALGKGKRRIVIDSV 207
Query: 75 VVGGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSH 131
G T E G +Y +G N+ LG ++ D+ F P+ + K + + IS G H
Sbjct: 208 WTGSYATFARAKETGLIYVFGLNNYNQLGLPSQ-DARFQPEVSDGFKGHRWLSISCGQHH 266
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGIVKIASGADHFVMLT 188
++AL E+G VY+ G R +G +G+ + TP+ V++ +G + +T
Sbjct: 267 TLALDENGQVYSLG--RKEYGRLGMGADAKDLAIPTPIPALQSQKCVEVTAGESVSLAVT 324
Query: 189 SRGNLLTAGCPEQGQLG 205
G + G GQLG
Sbjct: 325 ESGMAFSWGMGTNGQLG 341
>gi|380022175|ref|XP_003694928.1| PREDICTED: regulator of chromosome condensation-like [Apis florea]
Length = 431
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 232/364 (63%), Gaps = 14/364 (3%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
P L+ GGV+L GQGD GQLGLG +V+E+ A+V +++ V GGMH VCL +
Sbjct: 34 PDLRQSATGGVLLVFGQGDVGQLGLGEEVVEKTRPAVVPGYQDIISVAAGGMHNVCLRQT 93
Query: 88 GKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G+V T+GCNDEGALGR+ D SE P +V LP KA+Q++AGDSHS ALLEDG V+AWGS
Sbjct: 94 GEVLTFGCNDEGALGRDTSKDGSETEPGSVELPSKAIQVTAGDSHSAALLEDGRVFAWGS 153
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
FRDSHG+MGL +G ++ P+++ IVKIASGADH V+L G++ T GC EQGQLGR
Sbjct: 154 FRDSHGTMGLTLKGNERFPIEILPNVNIVKIASGADHLVLLDKNGHVYTCGCGEQGQLGR 213
Query: 207 ITQRSASRNARRGMS-FLEPGEVPL---KRKHIDDVFTGVYNTFIS--SKGSILAFGLNN 260
+ R+ASRN R GM L PG V K+ DD++ G Y TF KG I FGLNN
Sbjct: 214 VAARTASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNN 273
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y Q+G D F P + K+ S K + ++SGQHH++AL+ G+++ GR +Y
Sbjct: 274 YYQIGLKDP-------ITHFHPQVSKTFSGKVWRHISSGQHHTIALDDSGQVFVMGRKEY 326
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL + E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+
Sbjct: 327 GRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGE 386
Query: 381 EDDI 384
E+D+
Sbjct: 387 EEDV 390
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E ++KT P + I+ +A+G H V L G +LT GC ++G LGR T +
Sbjct: 54 GQLGLGEEVVEKTRPAVVPGYQDIISVAAGGMHNVCLRQTGEVLTFGCNDEGALGRDTSK 113
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S EPG V L K I ++ + G + A+G +++ +G
Sbjct: 114 DGSET--------EPGSVELPSKAIQVTAGDSHSAALLEDGRVFAWGSFRDSHGTMG--- 162
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---L 325
+ GN F I+ L + +ASG H + L+ G +Y G + G+LG
Sbjct: 163 --LTLKGNERF----PIEILPNVNIVKIASGADHLVLLDKNGHVYTCGCGEQGQLGRVAA 216
Query: 326 KNVSEPVTE---PTPIPSLQDKTITS------IACGNCVSFAID-SEGVLYGWGMGNGYQ 375
+ S P P L + +T I G +FA + +G +Y +G+ N YQ
Sbjct: 217 RTASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNNYYQ 276
Query: 376 LG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE 409
+G +G+ I L+ G+++ GR +YGRLGL +
Sbjct: 277 IGLKDPITHFHPQVSKTFSGKVWRHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGSNCL 336
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+E+D+ EP +
Sbjct: 337 DAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGEEEDVEEPTLV 396
Query: 470 EGKQLNNYTVLQVASGGQHSVILAKPKP 497
+GKQL TV++VA GGQH++ LA P
Sbjct: 397 KGKQLEGKTVVRVAGGGQHTLTLATIHP 424
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLG + ++ K LV +L + ++V G + +TE G +Y+WG
Sbjct: 316 GQVFVMGRKEYGRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWG 375
Query: 95 CNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVAL 135
G LG E D E + K V+++ G H++ L
Sbjct: 376 MGSSGQLGTGEEEDVEEPTLVKGKQLEGKTVVRVAGGGQHTLTL 419
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEFIPQTVNLPK-KAVQISAGDSHSVA 134
G HT+ L + G+V+ G + G LG + D++ + NL K + ++AG + S A
Sbjct: 305 GQHHTIALDDSGQVFVMGRKEYGRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFA 364
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
+ E G +Y+WG G + + + T +K + + G +V++A G H + L +
Sbjct: 365 VTELGDLYSWGMGSSGQLGTGEEEDVEEPTLVKGKQLEGKTVVRVAGGGQHTLTLAT 421
>gi|327315378|ref|NP_001192152.1| regulator of chromosome condensation [Apis mellifera]
Length = 431
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 232/364 (63%), Gaps = 14/364 (3%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
P L+ GGV+L GQGD GQLGLG +V+E+ A+V +++ V GGMH VCL +
Sbjct: 34 PDLRQSATGGVLLVFGQGDVGQLGLGEEVVEKTRPAVVPGYQDIISVAAGGMHNVCLRQT 93
Query: 88 GKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G+V T+GCNDEGALGR+ D SE P +V LP KA+Q++AGDSHS ALLEDG V+AWGS
Sbjct: 94 GEVLTFGCNDEGALGRDTSKDGSETEPGSVELPNKAIQVTAGDSHSAALLEDGRVFAWGS 153
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
FRDSHG+MGL +G ++ P+++ +VKIASGADH V+L G++ T GC EQGQLGR
Sbjct: 154 FRDSHGTMGLTLKGNERFPIEILPNVNVVKIASGADHLVLLDKNGHVYTCGCGEQGQLGR 213
Query: 207 ITQRSASRNARRGMS-FLEPGEVPL---KRKHIDDVFTGVYNTFIS--SKGSILAFGLNN 260
+ R+ASRN R GM L PG V K+ DD++ G Y TF KG I FGLNN
Sbjct: 214 VAARTASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNN 273
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y Q+G D F P + K+ S K + ++SGQHH++AL+ G+++ GR +Y
Sbjct: 274 YYQIGLKDP-------VTHFHPQVSKTFSGKVWRHISSGQHHTIALDDSGQVFVMGRKEY 326
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL + E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+
Sbjct: 327 GRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGE 386
Query: 381 EDDI 384
E+D+
Sbjct: 387 EEDV 390
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E ++KT P + I+ +A+G H V L G +LT GC ++G LGR T +
Sbjct: 54 GQLGLGEEVVEKTRPAVVPGYQDIISVAAGGMHNVCLRQTGEVLTFGCNDEGALGRDTSK 113
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S EPG V L K I ++ + G + A+G +++ +G
Sbjct: 114 DGSET--------EPGSVELPNKAIQVTAGDSHSAALLEDGRVFAWGSFRDSHGTMG--- 162
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---L 325
+ GN F I+ L + +ASG H + L+ G +Y G + G+LG
Sbjct: 163 --LTLKGNERF----PIEILPNVNVVKIASGADHLVLLDKNGHVYTCGCGEQGQLGRVAA 216
Query: 326 KNVSEPVTE---PTPIPSLQDKTITS------IACGNCVSFAID-SEGVLYGWGMGNGYQ 375
+ S P P L + +T I G +FA + +G +Y +G+ N YQ
Sbjct: 217 RTASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNNYYQ 276
Query: 376 LG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE 409
+G +G+ I L+ G+++ GR +YGRLGL +
Sbjct: 277 IGLKDPVTHFHPQVSKTFSGKVWRHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGSNCL 336
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+E+D+ EP +
Sbjct: 337 DAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGEEEDVEEPTLV 396
Query: 470 EGKQLNNYTVLQVASGGQHSVILAKPKP 497
+GKQL TV++VA GGQH++ LA P
Sbjct: 397 KGKQLEGKTVVRVAGGGQHTLTLATIHP 424
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLG + ++ K LV +L + ++V G + +TE G +Y+WG
Sbjct: 316 GQVFVMGRKEYGRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWG 375
Query: 95 CNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVAL 135
G LG E D E + K V+++ G H++ L
Sbjct: 376 MGSSGQLGTGEEEDVEEPTLVKGKQLEGKTVVRVAGGGQHTLTL 419
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEFIPQTVNLPK-KAVQISAGDSHSVA 134
G HT+ L + G+V+ G + G LG + D++ + NL K + ++AG + S A
Sbjct: 305 GQHHTIALDDSGQVFVMGRKEYGRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFA 364
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
+ E G +Y+WG G + + + T +K + + G +V++A G H + L +
Sbjct: 365 VTELGDLYSWGMGSSGQLGTGEEEDVEEPTLVKGKQLEGKTVVRVAGGGQHTLTLAT 421
>gi|328792337|ref|XP_003251711.1| PREDICTED: regulator of chromosome condensation [Apis mellifera]
Length = 472
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 232/364 (63%), Gaps = 14/364 (3%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
P L+ GGV+L GQGD GQLGLG +V+E+ A+V +++ V GGMH VCL +
Sbjct: 75 PDLRQSATGGVLLVFGQGDVGQLGLGEEVVEKTRPAVVPGYQDIISVAAGGMHNVCLRQT 134
Query: 88 GKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G+V T+GCNDEGALGR+ D SE P +V LP KA+Q++AGDSHS ALLEDG V+AWGS
Sbjct: 135 GEVLTFGCNDEGALGRDTSKDGSETEPGSVELPNKAIQVTAGDSHSAALLEDGRVFAWGS 194
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
FRDSHG+MGL +G ++ P+++ +VKIASGADH V+L G++ T GC EQGQLGR
Sbjct: 195 FRDSHGTMGLTLKGNERFPIEILPNVNVVKIASGADHLVLLDKNGHVYTCGCGEQGQLGR 254
Query: 207 ITQRSASRNARRGMS-FLEPGEVPL---KRKHIDDVFTGVYNTFIS--SKGSILAFGLNN 260
+ R+ASRN R GM L PG V K+ DD++ G Y TF KG I FGLNN
Sbjct: 255 VAARTASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNN 314
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y Q+G D F P + K+ S K + ++SGQHH++AL+ G+++ GR +Y
Sbjct: 315 YYQIGLKDP-------VTHFHPQVSKTFSGKVWRHISSGQHHTIALDDSGQVFVMGRKEY 367
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL + E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+
Sbjct: 368 GRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGE 427
Query: 381 EDDI 384
E+D+
Sbjct: 428 EEDV 431
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E ++KT P + I+ +A+G H V L G +LT GC ++G LGR T +
Sbjct: 95 GQLGLGEEVVEKTRPAVVPGYQDIISVAAGGMHNVCLRQTGEVLTFGCNDEGALGRDTSK 154
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S EPG V L K I ++ + G + A+G +++ +G
Sbjct: 155 DGSET--------EPGSVELPNKAIQVTAGDSHSAALLEDGRVFAWGSFRDSHGTMG--- 203
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---L 325
+ GN F I+ L + +ASG H + L+ G +Y G + G+LG
Sbjct: 204 --LTLKGNERF----PIEILPNVNVVKIASGADHLVLLDKNGHVYTCGCGEQGQLGRVAA 257
Query: 326 KNVSEPVTE---PTPIPSLQDKTITS------IACGNCVSFAID-SEGVLYGWGMGNGYQ 375
+ S P P L + +T I G +FA + +G +Y +G+ N YQ
Sbjct: 258 RTASRNTRHGMGPLLTPGLVEFKVTKKLEFDDIWAGTYCTFAKEYQKGDIYVFGLNNYYQ 317
Query: 376 LG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE 409
+G +G+ I L+ G+++ GR +YGRLGL +
Sbjct: 318 IGLKDPVTHFHPQVSKTFSGKVWRHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGSNCL 377
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+E+D+ EP +
Sbjct: 378 DAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGEEEDVEEPTLV 437
Query: 470 EGKQLNNYTVLQVASGGQHSVILAKPKP 497
+GKQL TV++VA GGQH++ LA P
Sbjct: 438 KGKQLEGKTVVRVAGGGQHTLTLATIHP 465
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLG + ++ K LV +L + ++V G + +TE G +Y+WG
Sbjct: 357 GQVFVMGRKEYGRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFAVTELGDLYSWG 416
Query: 95 CNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVAL 135
G LG E D E + K V+++ G H++ L
Sbjct: 417 MGSSGQLGTGEEEDVEEPTLVKGKQLEGKTVVRVAGGGQHTLTL 460
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEFIPQTVNLPK-KAVQISAGDSHSVA 134
G HT+ L + G+V+ G + G LG + D++ + NL K + ++AG + S A
Sbjct: 346 GQHHTIALDDSGQVFVMGRKEYGRLGLGSNCLDAKELTLVPNLSSFKCIDVAAGSAQSFA 405
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
+ E G +Y+WG G + + + T +K + + G +V++A G H + L +
Sbjct: 406 VTELGDLYSWGMGSSGQLGTGEEEDVEEPTLVKGKQLEGKTVVRVAGGGQHTLTLAT 462
>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
Length = 440
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/368 (49%), Positives = 240/368 (65%), Gaps = 15/368 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G LT GQGD GQLGLGPD +ERK A+ DL+ V V+V GGMHTV L++DGKVYTWG
Sbjct: 45 GQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYTWG 104
Query: 95 CNDEGALGRE--AEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDS 150
CND+GALGRE +EG+ EF P V++P V +SAGDSH+ AL + GTVYAWG++RD+
Sbjct: 105 CNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTYRDA 164
Query: 151 HGSMGLKGEGIQKTP---LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +GL+ +G++K P L ES I+KIASG DH LT+ GNL T GC EQGQLGR+
Sbjct: 165 SGQIGLQPDGVKKKPAVILTSES-DRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRV 223
Query: 208 TQRSASRNARRGMSF-LEPGEVPLKRK-HIDDVFTGVYNTFISSK--GSILAFGLNNYSQ 263
+ ++R RRG+++ LEP V K+ DVF G + TF+ +K + A+GLNNY Q
Sbjct: 224 KECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYAWGLNNYGQ 283
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG D + L KS DK T +A+GQHH++ + GK+YA GR DYGRL
Sbjct: 284 LGTGDVQTWHFPVKVKSLSQLNKSEKDKHIT-IANGQHHTIVCDPNGKVYALGRADYGRL 342
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL + ++ P I SL ++ I +ACG CVSFA+ +G LY WGMG+ QLGNG ++D
Sbjct: 343 GLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVSDKGELYSWGMGSCLQLGNGNDED 402
Query: 384 ILNSEGKI 391
+ + K+
Sbjct: 403 DVTTPAKV 410
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 190/399 (47%), Gaps = 69/399 (17%)
Query: 152 GSMGLKGEGIQK----TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +GL + +++ P+ LE V IV++ SG H V L+ G + T GC + G LGR
Sbjct: 56 GQLGLGPDTLERKKPAVPIDLEGVP-IVQVESGGMHTVALSKDGKVYTWGCNDDGALGRE 114
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNYSQLG 265
T + G+ + P +V + D T +S +G++ A+G + Q+G
Sbjct: 115 TTSEGEEEFQPGVVSM-PDDVNIVMVSAGDSHTAA----LSDQGTVYAWGTYRDASGQIG 169
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
V+K P +I + + +ASG H+ AL + G ++ G + G+LG
Sbjct: 170 LQPDGVKKK-------PAVILTSESDRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLG- 221
Query: 326 KNVSEP------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV-LYGWGMGN 372
V E + EP + S + + CG+ +F + G +Y WG+ N
Sbjct: 222 -RVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYAWGLNN 280
Query: 373 GYQLGNG-------------------KEDD-------------ILNSEGKIYAFGRHDYG 400
QLG G E D + + GK+YA GR DYG
Sbjct: 281 YGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVYALGRADYG 340
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK- 459
RLGL + ++ P I SL ++ I +ACG CVSFA+ +G LY WGMG+ QLGNG
Sbjct: 341 RLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVSDKGELYSWGMGSCLQLGNGND 400
Query: 460 EDDILEPMKIEGKQLNNYT--VLQVASGGQHSVILAKPK 496
EDD+ P K++GK LN+ T VL V++GGQH+VILA +
Sbjct: 401 EDDVTTPAKVQGKNLNSETHRVLGVSAGGQHTVILAAER 439
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 93/232 (40%), Gaps = 38/232 (16%)
Query: 231 KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
K K DVFT + G L G + QLG +++ P + L
Sbjct: 30 KTKEKQDVFTSSLES-----GQALTLGQGDVGQLGLGPDTLERK------KPAVPIDLEG 78
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITS 348
+ SG H++AL+ +GK+Y +G +D G LG + SE E P + D I
Sbjct: 79 VPIVQVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVM 138
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
++ G+ + A+ +G +Y WG Y R G++GL+
Sbjct: 139 VSAGDSHTAALSDQGTVYAWGT---------------------Y---RDASGQIGLQPDG 174
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+P I + + I IA GN + A+ + G L+ G QLG KE
Sbjct: 175 VK-KKPAVILTSESDRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRVKE 225
>gi|55742589|ref|NP_998343.1| regulator of chromosome condensation [Danio rerio]
gi|37589177|gb|AAH59796.1| Regulator of chromosome condensation 1 [Danio rerio]
gi|44890536|gb|AAH66721.1| Regulator of chromosome condensation 1 [Danio rerio]
Length = 418
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/389 (48%), Positives = 248/389 (63%), Gaps = 22/389 (5%)
Query: 6 KKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALV 65
KK +++Q PS V + G+VL GQGD GQLGLG DVMERK ALV
Sbjct: 4 KKAVKRQTAAPSDSTVAKKLKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALV 63
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQ 124
+ +V+ V GGMHTVCL++ G VYT+GCNDEGALGR+ +E SE +P V+L +K +Q
Sbjct: 64 TLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQ 123
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK--TPLKLESVSGIVKIASGAD 182
+SAGDSHS AL EDG VY WGSFRD++G +GL E ++K P+K+ +VKI SG D
Sbjct: 124 VSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLL-EPMKKCTVPVKVPIDKPVVKIVSGND 182
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG-MSFLEPGEVPLKRKH---IDDV 238
H VMLT+ G L T+GC EQGQLGR+ + A+R R+G M LEP V +K + DV
Sbjct: 183 HLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDV 242
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTM 295
F G Y TF +S +G + FGL+NY QLG +S NTC F P + S S +
Sbjct: 243 FCGAYFTFAVSKEGHVYGFGLSNYHQLG------TQSTNTC-FVPVKLSSFKNSTTSWVG 295
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ GQHH+L LNSEGK Y+ GR +YGRLGL K+V E +EPT +P + D + +ACG
Sbjct: 296 FSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEK-SEPTVVPGISD--VQVVACGAS 352
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
VS+A+ +G ++ WGMG QLG G+E+D
Sbjct: 353 VSYAVTKQGSVFSWGMGTNLQLGTGEEED 381
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 184/392 (46%), Gaps = 69/392 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + GIV+ +G H V L+ GN+ T GC ++G LGR T
Sbjct: 46 GQLGL-GEDVMERKKPALVTLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTS 104
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S P +V L K I ++ ++ G + +G +N +G
Sbjct: 105 EEGSETV--------PAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIG-- 154
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--- 324
+ + C +K DK + SG H + L + G++Y G + G+LG
Sbjct: 155 ---LLEPMKKCTVP---VKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVA 208
Query: 325 -----------LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
L + EP + I T + CG +FA+ EG +YG+G+ N
Sbjct: 209 EHFANRGGRKGLMRLLEP--QMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNY 266
Query: 374 YQLGNGKEDDI----------------------------LNSEGKIYAFGRHDYGRLGL- 404
+QLG + LNSEGK Y+ GR +YGRLGL
Sbjct: 267 HQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLG 326
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
K+V E +EPT +P + D + +ACG VS+A+ +G ++ WGMG QLG G+E+D
Sbjct: 327 KDVGEK-SEPTVVPGISD--VQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEW 383
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 384 SPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 415
>gi|312374979|gb|EFR22435.1| hypothetical protein AND_15263 [Anopheles darlingi]
Length = 426
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 235/361 (65%), Gaps = 15/361 (4%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K T G VL CGQG+ GQLGLG DVME+ A+V+ L +VV++ GGMH +CLT GKV
Sbjct: 32 KRPTVSGNVLACGQGEVGQLGLGEDVMEKTRPAIVDGLSDVVDISAGGMHNLCLTATGKV 91
Query: 91 YTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ +E SEF+P+ ++LP V+ISAGDSHS LLEDG +AWGSFRD
Sbjct: 92 YSFGCNDEGALGRDTSEEGSEFVPKAIDLPGPCVKISAGDSHSACLLEDGRAFAWGSFRD 151
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL EG ++ P+++ V IASG+DH V+L++ GN+ T GC EQGQLGRI+
Sbjct: 152 SHGNMGLTLEGNKRLPIEVLPTHRWVDIASGSDHLVLLSNTGNIYTVGCAEQGQLGRISI 211
Query: 210 RSASRNARRGMS-FLEPGEVPLKRKHI--DDVFTGVYNTFIS--SKGSILAFGLNNYSQL 264
R+AS +RRG + L P V L+ K + D ++ Y TF+ K I AFGLNNY QL
Sbjct: 212 RAASGESRRGKTQLLRPDIVTLRGKAVVADAIWATTYCTFLRDPQKEHIYAFGLNNYCQL 271
Query: 265 GEADSEVQKSGNTC--FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
G ++ S N F P + + ++ +A GQHH++ L +GK+Y GR +YGR
Sbjct: 272 GISNP----SENVVKPVFVPEVTSFIDAQQ---IAGGQHHTIVLKDDGKVYVIGRKEYGR 324
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LGL VSE T + L ++ + I+CG SFA+ + G +Y WGMG+ QLG G E+
Sbjct: 325 LGLGEVSEDAKILTLVEKLAERKVIGISCGESTSFAVTNAGEVYAWGMGSNQQLGTGSEE 384
Query: 383 D 383
D
Sbjct: 385 D 385
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 191/426 (44%), Gaps = 51/426 (11%)
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
T G V G + G LG + + P V+ V ISAG H++ L G VY++
Sbjct: 35 TVSGNVLACGQGEVGQLGLGEDVMEKTRPAIVDGLSDVVDISAGGMHNLCLTATGKVYSF 94
Query: 145 GSFRDSHGSMG--LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--PE 200
G + G++G EG + P ++ VKI++G H L G G
Sbjct: 95 GC--NDEGALGRDTSEEGSEFVPKAIDLPGPCVKISAGDSHSACLLEDGRAFAWGSFRDS 152
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
G +G +T R P EV + +D + +S+ G+I G
Sbjct: 153 HGNMG-LTLEGNKR---------LPIEVLPTHRWVDIASGSDHLVLLSNTGNIYTVGCAE 202
Query: 261 YSQLGE----ADSEVQKSGNTCFFTPHLIKSLSDKKFT---MLASGQHHSLALNSEGKIY 313
QLG A S + G T P ++ +L K + A+ L + IY
Sbjct: 203 QGQLGRISIRAASGESRRGKTQLLRPDIV-TLRGKAVVADAIWATTYCTFLRDPQKEHIY 261
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
AFG ++Y +LG+ N SE V +P +P V+ ID++
Sbjct: 262 AFGLNNYCQLGISNPSENVVKPVFVPE--------------VTSFIDAQ----------- 296
Query: 374 YQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
Q+ G+ I L +GK+Y GR +YGRLGL VSE T + L ++ + I+CG
Sbjct: 297 -QIAGGQHHTIVLKDDGKVYVIGRKEYGRLGLGEVSEDAKILTLVEKLAERKVIGISCGE 355
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
SFA+ + G +Y WGMG+ QLG G E+D + P+ I KQ+ N VL+V+SGGQHS+ L
Sbjct: 356 STSFAVTNAGEVYAWGMGSNQQLGTGSEEDEISPVLIASKQVQNKVVLKVSSGGQHSIFL 415
Query: 493 AKPKPN 498
+ PN
Sbjct: 416 VQETPN 421
>gi|383865068|ref|XP_003707997.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Megachile rotundata]
Length = 469
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 230/364 (63%), Gaps = 14/364 (3%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
P L+ GGV+L GQGD GQLGLG +++E+ A + +VV V GGMH VC+ +
Sbjct: 72 PDLRQIATGGVLLVFGQGDVGQLGLGEEIVEKTRPATIPGYQDVVAVAAGGMHNVCIRKT 131
Query: 88 GKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G+V T+GCNDEGALGR+ D SE P V+LP KAVQ++AGDSHS ALLEDG V+AWGS
Sbjct: 132 GEVLTFGCNDEGALGRDTSKDGSETEPGPVDLPGKAVQVTAGDSHSAALLEDGRVFAWGS 191
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
FRDSHGSMGL +G ++ P+++ IVKIASGADH V+L G++ T GC EQGQLGR
Sbjct: 192 FRDSHGSMGLTLKGNERFPIEILPNVKIVKIASGADHLVLLNENGHVYTCGCGEQGQLGR 251
Query: 207 ITQRSASRNARRGM-SFLEPGEVPL---KRKHIDDVFTGVYNTFIS--SKGSILAFGLNN 260
+ R+ASRN R G+ L P V K+ D++ G Y TF KG I AFGLNN
Sbjct: 252 VAARAASRNTRHGIGPLLIPALVEFKVTKKLEFTDIWAGSYCTFAKEYQKGDIYAFGLNN 311
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y Q+G D Q F P + K+ S K + ++SGQHH++AL+ G+++ GR +Y
Sbjct: 312 YYQIGLKDPVTQ-------FHPQISKTFSGKVWKHISSGQHHTIALDDSGQVFVMGRKEY 364
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+
Sbjct: 365 GRLGLGPNCSDAKELTLVPALSSFKCVDVAAGSAQSFAVTESGDLYSWGMGSNGQLGTGE 424
Query: 381 EDDI 384
E+D+
Sbjct: 425 EEDV 428
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 61/389 (15%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E ++KT P + +V +A+G H V + G +LT GC ++G LGR T +
Sbjct: 92 GQLGLGEEIVEKTRPATIPGYQDVVAVAAGGMHNVCIRKTGEVLTFGCNDEGALGRDTSK 151
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S EPG V L K + ++ + G + A+G +++ +G
Sbjct: 152 DGSET--------EPGPVDLPGKAVQVTAGDSHSAALLEDGRVFAWGSFRDSHGSMG--- 200
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--- 325
+ GN F I+ L + K +ASG H + LN G +Y G + G+LG
Sbjct: 201 --LTLKGNERF----PIEILPNVKIVKIASGADHLVLLNENGHVYTCGCGEQGQLGRVAA 254
Query: 326 ----KNVSEPVTEPTPIPSLQDKTITS------IACGNCVSFAID-SEGVLYGWGMGNGY 374
+N + P IP+L + +T I G+ +FA + +G +Y +G+ N Y
Sbjct: 255 RAASRNTRHGIG-PLLIPALVEFKVTKKLEFTDIWAGSYCTFAKEYQKGDIYAFGLNNYY 313
Query: 375 QLG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVS 408
Q+G +G+ I L+ G+++ GR +YGRLGL
Sbjct: 314 QIGLKDPVTQFHPQISKTFSGKVWKHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGPNC 373
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
E T +P+L +A G+ SFA+ G LY WGMG+ QLG G+E+D+ EP+
Sbjct: 374 SDAKELTLVPALSSFKCVDVAAGSAQSFAVTESGDLYSWGMGSNGQLGTGEEEDVEEPVL 433
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAKPKP 497
++GKQL T+++VA GGQH++ LA P
Sbjct: 434 VKGKQLEGKTIVRVAGGGQHTLALATTYP 462
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLGP+ + K LV L + V+V G + +TE G +Y+WG
Sbjct: 354 GQVFVMGRKEYGRLGLGPNCSDAKELTLVPALSSFKCVDVAAGSAQSFAVTESGDLYSWG 413
Query: 95 CNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVAL 135
G LG E D E + K V+++ G H++AL
Sbjct: 414 MGSNGQLGTGEEEDVEEPVLVKGKQLEGKTIVRVAGGGQHTLAL 457
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG------------------LGPDVM 57
P+ K+ + L G V TCG G+ GQLG L P ++
Sbjct: 215 PNVKIVKIASGADHLVLLNENGHVYTCGCGEQGQLGRVAARAASRNTRHGIGPLLIPALV 274
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTE--DGKVYTWGCNDEGALGREAEGDSEFIPQT 115
E K +E D + G + E G +Y +G N+ +G + + ++F PQ
Sbjct: 275 EFKVTKKLEFTD-----IWAGSYCTFAKEYQKGDIYAFGLNNYYQIGLK-DPVTQFHPQI 328
Query: 116 VNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK---GEGIQKTPLKLES 170
V IS+G H++AL + G V+ G R +G +GL + + T + S
Sbjct: 329 SKTFSGKVWKHISSGQHHTIALDDSGQVFVMG--RKEYGRLGLGPNCSDAKELTLVPALS 386
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
V +A+G+ +T G+L + G GQLG
Sbjct: 387 SFKCVDVAAGSAQSFAVTESGDLYSWGMGSNGQLG 421
>gi|62859419|ref|NP_001016101.1| regulator of chromosome condensation [Xenopus (Silurana)
tropicalis]
gi|89269034|emb|CAJ83970.1| regulator of chromosome condensation 1 [Xenopus (Silurana)
tropicalis]
Length = 420
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 255/397 (64%), Gaps = 24/397 (6%)
Query: 6 KKVLRKQ--AENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
KK L++ AE + V V T GG VLT GQGD GQLGLG DVMERK A
Sbjct: 4 KKALKRAIVAEESNGTSVVKKTKVNHSSYGTVGGQVLTLGQGDVGQLGLGEDVMERKKPA 63
Query: 64 LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKA 122
LV +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V+L +K
Sbjct: 64 LVTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSETQPGKVDLVEKV 123
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASG 180
VQ+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIASG
Sbjct: 124 VQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQMQINAPVIKIASG 182
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----RKH 234
DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R H
Sbjct: 183 NDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVH 242
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDK 291
DVF G Y TF +S +G + FGL+NY QLG K+ +C F P + S S K
Sbjct: 243 FQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLG------TKTTQSC-FAPQNLTSFKNSTK 295
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ + GQHH++ ++SEGK+Y+ GR +YGRLGL +E ++EPTPIP L S+AC
Sbjct: 296 SWVGFSGGQHHTICVDSEGKVYSLGRAEYGRLGLGENAEELSEPTPIPIL--PKTKSVAC 353
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
G VS+A+ ++G ++ WGMG QLG G+E+D+ + +
Sbjct: 354 GASVSYAVSNDGRVFAWGMGTNLQLGTGEEEDVWSPQ 390
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 192/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 48 GQLGL-GEDVMERKKPALVTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 106
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S +PG+V L K + + ++ G + FG +N +G
Sbjct: 107 EEGSET--------QPGKVDLVEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 158
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 159 EP-MKKS-----MVP--VQMQINAPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 208
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 209 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 268
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ I ++SEGK+Y+ GR +YGRLG
Sbjct: 269 NYHQLGTKTTQSCFAPQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKVYSLGRAEYGRLG 328
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E ++EPTPIP L S+ACG VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 329 LGENAEELSEPTPIPIL--PKTKSVACGASVSYAVSNDGRVFAWGMGTNLQLGTGEEEDV 386
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GKQL + VL V+SGGQH+V+L + +
Sbjct: 387 WSPQEMTGKQLEDRDVLSVSSGGQHTVLLVRKR 419
>gi|171846900|gb|AAI61455.1| rcc1 protein [Xenopus (Silurana) tropicalis]
Length = 419
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/367 (48%), Positives = 245/367 (66%), Gaps = 22/367 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T GG VLT GQGD GQLGLG DVMERK ALV +++V+ GGMHTVCL G +YT+
Sbjct: 33 TVGGQVLTLGQGDVGQLGLGEDVMERKKPALVTLPEDIVQAAAGGMHTVCLGASGSIYTF 92
Query: 94 GCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCNDEGALGR+ +E SE P V+L +K VQ+SAGDSH+ AL EDG V+ +GSFRD++G
Sbjct: 93 GCNDEGALGRDTSEEGSETQPGKVDLVEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNG 152
Query: 153 SMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL E ++K+ P++++ + ++KIASG DH V+LT G+L T+GC EQGQLGR+ +R
Sbjct: 153 VIGLL-EPMKKSMVPVQMQINAPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPER 211
Query: 211 SASRNARRGMS-FLEPGEVPLK-----RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
+R R+G+ L P + LK R H DVF G Y TF +S +G + FGL+NY Q
Sbjct: 212 FTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQ 271
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG K+ +C F P + S S K + + GQHH++ ++SEGK+Y+ GR +YG
Sbjct: 272 LG------TKTTQSC-FAPQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKVYSLGRAEYG 324
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
RLGL +E ++EPTPIP L S+ACG VS+A+ ++G ++ WGMG QLG G+E
Sbjct: 325 RLGLGENAEELSEPTPIPIL--PKTKSVACGASVSYAVSNDGRVFAWGMGTNLQLGTGEE 382
Query: 382 DDILNSE 388
+D+ + +
Sbjct: 383 EDVWSPQ 389
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 192/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 47 GQLGL-GEDVMERKKPALVTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 105
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S +PG+V L K + + ++ G + FG +N +G
Sbjct: 106 EEGSET--------QPGKVDLVEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 157
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 158 EP-MKKS-----MVP--VQMQINAPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 207
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 208 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 267
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ I ++SEGK+Y+ GR +YGRLG
Sbjct: 268 NYHQLGTKTTQSCFAPQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKVYSLGRAEYGRLG 327
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E ++EPTPIP L S+ACG VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 328 LGENAEELSEPTPIPIL--PKTKSVACGASVSYAVSNDGRVFAWGMGTNLQLGTGEEEDV 385
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GKQL + VL V+SGGQH+V+L + +
Sbjct: 386 WSPQEMTGKQLEDRDVLSVSSGGQHTVLLVRKR 418
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG + E + L V G + ++ DG+V+
Sbjct: 308 CVDSEGKVYSLGRAEYGRLGLGENAEELSEPTPIPILPKTKSVACGASVSYAVSNDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLE 137
WG LG E D + PQ + + + +S+G H+V L+
Sbjct: 368 AWGMGTNLQLGTGEEEDV-WSPQEMTGKQLEDRDVLSVSSGGQHTVLLVR 416
>gi|347970520|ref|XP_310274.7| AGAP003742-PA [Anopheles gambiae str. PEST]
gi|333466709|gb|EAA45186.5| AGAP003742-PA [Anopheles gambiae str. PEST]
Length = 511
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/388 (46%), Positives = 243/388 (62%), Gaps = 17/388 (4%)
Query: 6 KKVLRKQAENPSQKVFVTSE-AVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
+K + E P+ K+ T + +P G VL CGQG+ GQLG+G DVME+ A+
Sbjct: 7 RKDTPAEGEGPAAKMQRTKKLEIPLATLPKLSGNVLACGQGEMGQLGMGEDVMEKTRPAV 66
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAV 123
+E L +VV++ GGMH +CLT G VY++GCNDEGALGR+ +E SEF P+ ++LP + V
Sbjct: 67 IEGLSDVVQISAGGMHNLCLTRHGTVYSFGCNDEGALGRDTSEEGSEFEPKQIDLPGQCV 126
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADH 183
+ISAGDSHS LL+DG VYAWGSFRDSHG+MGL EG ++ P+++ + V IASG DH
Sbjct: 127 KISAGDSHSACLLDDGRVYAWGSFRDSHGNMGLTLEGNKRLPIEVLPGNRWVDIASGCDH 186
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLKRKHI--DDVFT 240
V+L+ G++ T GC EQGQLGR++ R+AS +RRG + L+PG V + K I + ++
Sbjct: 187 LVLLSDIGHIYTVGCAEQGQLGRVSIRAASGESRRGKTQLLQPGIVTRRGKMIVAEAIWA 246
Query: 241 GVYNTFIS--SKGSILAFGLNNYSQLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
Y TF G I AFGLNNY QLG V K F P + S + +
Sbjct: 247 TTYCTFYKDYQTGRIFAFGLNNYCQLGIPNPSENVVKP----VFVP---EPTSFDEVVQI 299
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
A GQHH+L L ++ K+YA GR +YGRLGL +V+E P+ +L DK + S+ CG
Sbjct: 300 AGGQHHTLVLKTDHKVYAIGRKEYGRLGLGDDVTEDAKTLQPVAALGDKKVVSVCCGEST 359
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
SFA+ +G LY WGMG+ QLG G E D
Sbjct: 360 SFAVTDKGELYAWGMGSSLQLGTGLETD 387
>gi|115528650|gb|AAI24849.1| Chc1-a protein [Xenopus laevis]
Length = 420
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 182/396 (45%), Positives = 253/396 (63%), Gaps = 24/396 (6%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
LK+ + + N + V T P+ T GG VLT GQGD GQLGLG D+MERK AL
Sbjct: 7 LKRTIAAEESNGTSDVKKTKVTHPSHG--TVGGQVLTLGQGDVGQLGLGEDIMERKKPAL 64
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAV 123
V +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V L +K V
Sbjct: 65 VTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVV 124
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGA 181
Q+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIASG
Sbjct: 125 QVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQVQINTPVIKIASGN 183
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----RKHI 235
DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R H
Sbjct: 184 DHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHF 243
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKK 292
DVF G Y TF +S +G + FGL+NY QLG +++ C + P + S S K
Sbjct: 244 QDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQA------C-YAPQNLTSFKNSTKS 296
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ + GQHH++ ++SEGK Y+ GR +YGRLGL +E +EPTPIP L I S+A G
Sbjct: 297 WIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL--PKINSVASG 354
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
VS+A+ ++G ++ WGMG QLG G+E+D+ + E
Sbjct: 355 ASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPE 390
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 191/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE I +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 48 GQLGL-GEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 106
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++PG+V L K + + ++ G + FG +N +G
Sbjct: 107 EEGSE--------MQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 158
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 159 EP-MKKS-----MVP--VQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 208
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 209 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 268
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ + ++SEGK Y+ GR +YGRLG
Sbjct: 269 NYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLG 328
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E +EPTPIP L I S+A G VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 329 LGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDV 386
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GKQL + VL V+SGGQH+V+L + +
Sbjct: 387 WSPEQMTGKQLEDREVLSVSSGGQHTVLLVRKR 419
>gi|47682592|gb|AAH70867.1| Chc1-a-prov protein, partial [Xenopus laevis]
Length = 417
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/396 (45%), Positives = 253/396 (63%), Gaps = 24/396 (6%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
LK+ + + N + V T P+ T GG VLT GQGD GQLGLG D+MERK AL
Sbjct: 4 LKRTIAAEESNGTSDVKKTKVTHPSHG--TVGGQVLTLGQGDVGQLGLGEDIMERKKPAL 61
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAV 123
V +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V L +K V
Sbjct: 62 VTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVV 121
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGA 181
Q+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIASG
Sbjct: 122 QVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQVQINTPVIKIASGN 180
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----RKHI 235
DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R H
Sbjct: 181 DHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHF 240
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKK 292
DVF G Y TF +S +G + FGL+NY QLG +++ C + P + S S K
Sbjct: 241 QDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQA------C-YAPQNLTSFKNSTKS 293
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ + GQHH++ ++SEGK Y+ GR +YGRLGL +E +EPTPIP L I S+A G
Sbjct: 294 WIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL--PKINSVASG 351
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
VS+A+ ++G ++ WGMG QLG G+E+D+ + E
Sbjct: 352 ASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPE 387
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 191/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE I +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 45 GQLGL-GEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 103
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++PG+V L K + + ++ G + FG +N +G
Sbjct: 104 EEGSE--------MQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 155
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 156 EP-MKKS-----MVP--VQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 205
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 206 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 265
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ + ++SEGK Y+ GR +YGRLG
Sbjct: 266 NYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLG 325
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E +EPTPIP L I S+A G VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 326 LGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDV 383
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GKQL + VL V+SGGQH+V+L + +
Sbjct: 384 WSPEQMTGKQLEDREVLSVSSGGQHTVLLVRKR 416
>gi|147900380|ref|NP_001085384.1| regulator of chromosome condensation [Xenopus laevis]
gi|80476812|gb|AAI08773.1| Chc1-b protein [Xenopus laevis]
Length = 420
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/396 (45%), Positives = 253/396 (63%), Gaps = 24/396 (6%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
LK+ + + N + V T P+ +G VLT GQGD GQLGLG DVMERK AL
Sbjct: 7 LKRAIAAEESNGTSDVKKTKVTHPSHGIVSG--QVLTLGQGDVGQLGLGEDVMERKKPAL 64
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAV 123
V +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V L +K V
Sbjct: 65 VTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPDKVELVEKVV 124
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGA 181
Q+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIASG
Sbjct: 125 QVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQVQINAPVMKIASGN 183
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----RKHI 235
DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R H
Sbjct: 184 DHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHF 243
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKK 292
DVF G Y TF +S +G + FGL+NY QLG K+ +C + P + S S K
Sbjct: 244 QDVFCGAYFTFAVSQEGHVFGFGLSNYHQLG------TKTTQSC-YAPQNLTSFKNSTKS 296
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ + GQHH++ ++SEGK Y+ GR +YGRLGL +E EPTP+P+L I S+ACG
Sbjct: 297 WVGFSGGQHHTICVDSEGKAYSLGRAEYGRLGLGENAEEQNEPTPVPNL--PKIKSVACG 354
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
VS+A+ ++G ++ WGMG QLG G+E+D+ + E
Sbjct: 355 ASVSYAVSTDGGVFAWGMGTNLQLGTGEEEDVWSPE 390
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 190/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 48 GQLGL-GEDVMERKKPALVTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 106
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++P +V L K + + ++ G + FG +N +G
Sbjct: 107 EEGSE--------MQPDKVELVEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 158
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 159 EP-MKKS-----MVP--VQVQINAPVMKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 208
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG ++G+G+
Sbjct: 209 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVFGFGLS 268
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ I ++SEGK Y+ GR +YGRLG
Sbjct: 269 NYHQLGTKTTQSCYAPQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKAYSLGRAEYGRLG 328
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E EPTP+P+L I S+ACG VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 329 LGENAEEQNEPTPVPNL--PKIKSVACGASVSYAVSTDGGVFAWGMGTNLQLGTGEEEDV 386
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GKQL + VL ++ GGQH+V+L + +
Sbjct: 387 WSPEQMTGKQLEDREVLSISGGGQHTVLLVRKR 419
>gi|148227322|ref|NP_001081229.1| regulator of chromosome condensation [Xenopus laevis]
gi|132173|sp|P25183.1|RCC1_XENLA RecName: Full=Regulator of chromosome condensation
gi|222969|dbj|BAA00586.1| RCC1 protein [Xenopus laevis]
Length = 424
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 256/399 (64%), Gaps = 26/399 (6%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCK---TGGGVVLTCGQGDTGQLGLGPDVMERKT 61
LK+ + + N + V T +A+P + T GG VLT GQGD GQLGLG D+MERK
Sbjct: 7 LKRTIAAEESNGTSDVKKT-KALPIVTHPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKK 65
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPK 120
ALV +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V L +
Sbjct: 66 PALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAE 125
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIA 178
K VQ+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIA
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQVQINTPVIKIA 184
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----R 232
SG DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R
Sbjct: 185 SGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGR 244
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--S 289
H DVF G Y TF +S +G + FGL+NY QLG +++ C + P + S S
Sbjct: 245 VHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQA------C-YAPQNLTSFKNS 297
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K + + GQHH++ ++SEGK Y+ GR +YGRLGL +E +EPTPIP L I S+
Sbjct: 298 TKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL--PKINSV 355
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
A G VS+A+ ++G ++ WGMG QLG G+E+D+ + E
Sbjct: 356 ASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPE 394
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 190/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE I +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 52 GQLGL-GEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 110
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++PG+V L K + + ++ G + FG +N +G
Sbjct: 111 EEGSE--------MQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 162
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 163 EP-MKKS-----MVP--VQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 212
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 213 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 272
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ + ++SEGK Y+ GR +YGRLG
Sbjct: 273 NYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLG 332
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E +EPTPIP L I S+A G VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 333 LGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDV 390
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GK L + VL V+SGGQH+V+L + +
Sbjct: 391 WSPEQMTGKHLEDREVLSVSSGGQHTVLLVRKR 423
>gi|48735020|gb|AAH72030.1| Chc1-b-prov protein [Xenopus laevis]
Length = 420
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/396 (45%), Positives = 253/396 (63%), Gaps = 24/396 (6%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
LK+ + + N + V T P+ +G VLT GQGD GQLGLG DVMERK AL
Sbjct: 7 LKRAIAAEESNGTSDVKKTKVTHPSHGIVSG--QVLTLGQGDVGQLGLGEDVMERKKPAL 64
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAV 123
V +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V L +K V
Sbjct: 65 VTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPDKVELVEKVV 124
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGA 181
Q+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIASG
Sbjct: 125 QVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQVQINAPVMKIASGN 183
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----RKHI 235
DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R H
Sbjct: 184 DHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHF 243
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKK 292
DVF G Y TF +S +G + FGL+NY QLG K+ +C + P + S S K
Sbjct: 244 QDVFCGAYFTFAVSQEGHVYGFGLSNYHQLG------TKTTQSC-YAPQNLTSFKNSTKS 296
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ + GQHH++ ++SEGK Y+ GR +YGRLGL +E EPTP+P+L I S+ACG
Sbjct: 297 WVGFSGGQHHTICVDSEGKAYSLGRAEYGRLGLGENAEEQNEPTPVPNL--PKIKSVACG 354
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
VS+A+ ++G ++ WGMG QLG G+E+D+ + E
Sbjct: 355 ASVSYAVSTDGGVFAWGMGTNLQLGTGEEEDVWSPE 390
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 190/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 48 GQLGL-GEDVMERKKPALVTLPEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 106
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++P +V L K + + ++ G + FG +N +G
Sbjct: 107 EEGSE--------MQPDKVELVEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 158
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 159 EP-MKKS-----MVP--VQVQINAPVMKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 208
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 209 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 268
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ I ++SEGK Y+ GR +YGRLG
Sbjct: 269 NYHQLGTKTTQSCYAPQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKAYSLGRAEYGRLG 328
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E EPTP+P+L I S+ACG VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 329 LGENAEEQNEPTPVPNL--PKIKSVACGASVSYAVSTDGGVFAWGMGTNLQLGTGEEEDV 386
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GKQL + VL ++ GGQH+V+L + +
Sbjct: 387 WSPEQMTGKQLEDREVLSISGGGQHTVLLVRKR 419
>gi|327315362|ref|NP_001192146.1| regulator of chromosome condensation [Taeniopygia guttata]
Length = 420
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 232/361 (64%), Gaps = 23/361 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQG+ GQLGLG D+MERK ALV + VV+V GGMHTVCL++ GK+YT+GCN
Sbjct: 34 GLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCN 93
Query: 97 DEGALGRE--AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
DEGALGR+ AEG SE P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +
Sbjct: 94 DEGALGRDTSAEG-SESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVI 152
Query: 155 G-LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
G L+ PL LE + +VK+ SG DH VMLT G+L T GC EQGQLGR+ AS
Sbjct: 153 GLLEPMKTSSVPLLLELDAPVVKVVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFAS 212
Query: 214 RNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R RRG+ L P VP++ K D F G Y TF ++ +G I FGL+NY QLG
Sbjct: 213 RGGRRGLQRMLVPQLVPVRGKGRRSKMRFQDAFCGAYFTFAVTHEGHIYGFGLSNYHQLG 272
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
D+E C F+P + S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 273 TQDTE------PC-FSPRNLTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRL 325
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT IP L I S+ACG V +A+ S+G + WGMG YQLG G+EDD
Sbjct: 326 GLGTGAEEKSTPTVIPEL--PRIISVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDD 383
Query: 384 I 384
+
Sbjct: 384 V 384
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 198/435 (45%), Gaps = 76/435 (17%)
Query: 111 FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKL 168
+P+ + +K V++S H + G V G + + G +GL GE I +K P +
Sbjct: 10 LVPEGESTERKKVKVS----HPSHCSQPGLVLTLG--QGNVGQLGL-GEDIMERKKPALV 62
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
+V++ +G H V L+ G + T GC ++G LGR T S ++ PG V
Sbjct: 63 TLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESS--------PGLV 114
Query: 229 PLKRKHIDDVFTGVYNTFISSKGSILAFG----------------LNNYSQLGEADSEVQ 272
L+ K + + ++ G + +G ++ L E D+ V
Sbjct: 115 ELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPLLLELDAPVV 174
Query: 273 K--SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
K SGN HL+ D G+ L G++ A GR GL+ +
Sbjct: 175 KVVSGND-----HLVMLTVDGDLFTCGCGEQGQL-----GRVPALFASRGGRRGLQRMLV 224
Query: 331 PVTEPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN----------- 378
P P + K A CG +FA+ EG +YG+G+ N +QLG
Sbjct: 225 PQLVPVRGKGRRSKMRFQDAFCGAYFTFAVTHEGHIYGFGLSNYHQLGTQDTEPCFSPRN 284
Query: 379 ----------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G+ + ++SEGK Y+ GR +YGRLGL +E + PT IP L
Sbjct: 285 LTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPEL- 343
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
I S+ACG V +A+ S+G + WGMG YQLG G+EDD+ P+++ GKQL N VL
Sbjct: 344 -PRIISVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRQVLA 402
Query: 482 VASGGQHSVILAKPK 496
V+SGGQH+V+L K
Sbjct: 403 VSSGGQHTVLLVSDK 417
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T ++ +L ++ V G ++ DG+ +
Sbjct: 307 CVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRIISVACGASVGYAVSSDGRAF 366
Query: 92 TWGCNDEGALGREAEGDSEFIP------QTVNLPKKAVQISAGDSHSVALLED 138
WG LG E D + P Q N ++ + +S+G H+V L+ D
Sbjct: 367 AWGMGTNYQLG-TGEEDDVWSPVEMTGKQLEN--RQVLAVSSGGQHTVLLVSD 416
>gi|195020061|ref|XP_001985112.1| GH16887 [Drosophila grimshawi]
gi|193898594|gb|EDV97460.1| GH16887 [Drosophila grimshawi]
Length = 495
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/352 (50%), Positives = 225/352 (63%), Gaps = 15/352 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GDTGQLGLG DV+ERK ALVE + V+V GGMH++ LT G +Y++GCN
Sbjct: 44 GDVLVCGAGDTGQLGLGEDVLERKRLALVEGIPRAVDVCAGGMHSLVLTNSGDIYSFGCN 103
Query: 97 DEGALGREA-EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ E SE P + LP KA+ ISAGDSHS LLEDG V+AWGSFRDSHG+MG
Sbjct: 104 DEGALGRDTKEKGSESRPAIIELPGKALAISAGDSHSACLLEDGRVFAWGSFRDSHGNMG 163
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++TP+ L S IASGADH V+LT+ G T GC EQGQLGRI++RS +
Sbjct: 164 LTIDGNKRTPINLLEGSVCCSIASGADHLVILTTAGKAFTVGCAEQGQLGRISERSVNGE 223
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEV 271
RRG L P E+ +KR K + ++ Y TF+ S G I A GLNNY QL ++
Sbjct: 224 GRRGKQDLLRPDELIIKRTKPFEAIWATNYCTFVRESQTGIIWAVGLNNYKQLAHV-KDI 282
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
++ TP + +L D K +A GQHH+L L++ + A GRH+YGRLGL +V +
Sbjct: 283 ER-----VLTP-IKTNLKDVK--QIAGGQHHTLILDNAMRCLAVGRHNYGRLGLGDVKDV 334
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
V+EPT I L K + CG VSF I ++G LY WGMG QLG G DD
Sbjct: 335 VSEPTAIKQLNGKA-AFVGCGETVSFTITNDGKLYSWGMGTNLQLGVGDGDD 385
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 175/381 (45%), Gaps = 56/381 (14%)
Query: 152 GSMGLKGEGIQKTPLKL-ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL + +++ L L E + V + +G H ++LT+ G++ + GC ++G LGR T+
Sbjct: 55 GQLGLGEDVLERKRLALVEGIPRAVDVCAGGMHSLVLTNSGDIYSFGCNDEGALGRDTKE 114
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S + P + L K + ++ + G + A+G +++ +G
Sbjct: 115 KGSES--------RPAIIELPGKALAISAGDSHSACLLEDGRVFAWGSFRDSHGNMG--- 163
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--- 325
+ GN TP I L +ASG H + L + GK + G + G+LG
Sbjct: 164 --LTIDGNK--RTP--INLLEGSVCCSIASGADHLVILTTAGKAFTVGCAEQGQLGRISE 217
Query: 326 -------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGWGMGNGYQLG 377
+ + + P + + K +I N +F +S+ G+++ G+ N QL
Sbjct: 218 RSVNGEGRRGKQDLLRPDELIIKRTKPFEAIWATNYCTFVRESQTGIIWAVGLNNYKQLA 277
Query: 378 NGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
+ K+ + IL++ + A GRH+YGRLGL +V + V+E
Sbjct: 278 HVKDIERVLTPIKTNLKDVKQIAGGQHHTLILDNAMRCLAVGRHNYGRLGLGDVKDVVSE 337
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
PT I L K + CG VSF I ++G LY WGMG QLG G DD +EP+++ K
Sbjct: 338 PTAIKQLNGKA-AFVGCGETVSFTITNDGKLYSWGMGTNLQLGVGDGDDEMEPVEVVSKN 396
Query: 474 LNNYTVLQVASGGQHSVILAK 494
N +L GGQHSV L +
Sbjct: 397 TQNKRMLLADGGGQHSVFLVE 417
>gi|2134146|pir||I51558 RCC1 protein - African clawed frog (fragment)
gi|222967|dbj|BAA00542.1| RCC1 protein [Xenopus laevis]
Length = 405
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/367 (47%), Positives = 242/367 (65%), Gaps = 22/367 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T GG VLT GQGD GQLGLG D+MERK ALV +++V+ GGMHTVCL G +YT+
Sbjct: 19 TVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTF 78
Query: 94 GCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCNDEGALGR+ +E SE P V L +K VQ+SAGDSH+ AL EDG V+ +GSFRD++G
Sbjct: 79 GCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNG 138
Query: 153 SMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL E ++K+ P++++ + ++KIASG DH V+LT G+L T+GC EQGQLGR+ +R
Sbjct: 139 VIGLL-EPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPER 197
Query: 211 SASRNARRGMS-FLEPGEVPLK-----RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
+R R+G+ L P + LK R H DVF G Y TF +S +G + FGL+NY Q
Sbjct: 198 FTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQ 257
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG +++ C + P + S S K + + GQHH++ ++SEGK Y+ GR +YG
Sbjct: 258 LGTKNTQA------C-YAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYG 310
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
RLGL +E +EPTPIP L I S+A G VS+A+ ++G ++ WGMG QLG G+E
Sbjct: 311 RLGLGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEE 368
Query: 382 DDILNSE 388
+D+ + E
Sbjct: 369 EDVWSPE 375
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 190/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE I +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 33 GQLGL-GEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 91
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++PG+V L K + + ++ G + FG +N +G
Sbjct: 92 EEGSE--------MQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 143
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 144 EP-MKKS-----MVP--VQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 193
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 194 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 253
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ + ++SEGK Y+ GR +YGRLG
Sbjct: 254 NYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLG 313
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E +EPTPIP L I S+A G VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 314 LGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDV 371
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GK L + VL V+SGGQH+V+L + +
Sbjct: 372 WSPEQMTGKHLEDREVLSVSSGGQHTVLLVRKR 404
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG + E+ + DL + V G + ++ DG V+
Sbjct: 294 CVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINSVASGASVSYAVSTDGCVF 353
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLE 137
WG LG E D + P+ + ++ + +S+G H+V L+
Sbjct: 354 AWGMGTNLQLGTGEEEDV-WSPEQMTGKHLEDREVLSVSSGGQHTVLLVR 402
>gi|195127239|ref|XP_002008076.1| GI12030 [Drosophila mojavensis]
gi|193919685|gb|EDW18552.1| GI12030 [Drosophila mojavensis]
Length = 486
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/354 (50%), Positives = 232/354 (65%), Gaps = 15/354 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GDTGQLGLG DV+ERK A+VE++ N V++ GGMH + LT+ G +Y++GCN
Sbjct: 43 GNVLVCGTGDTGQLGLGEDVLERKRPAIVENIPNPVDICAGGMHCLVLTKSGDIYSFGCN 102
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ +E SE +P VNLP KA++ISAGDSHS LLEDG V+AWGSFRDSHG+MG
Sbjct: 103 DEGALGRDTSEEGSESLPALVNLPGKALRISAGDSHSACLLEDGRVFAWGSFRDSHGNMG 162
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++TP+ L IASGADH V+LT+ G + T GC EQGQLGRI++RS
Sbjct: 163 LTIDGNKRTPINLLDGMICCSIASGADHLVILTTSGKVFTVGCAEQGQLGRISERSVGGE 222
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEV 271
RRG L P ++ +KR K + ++ Y TF+ S G I A GLNNY QL A E
Sbjct: 223 GRRGKRDLLRPDQLIIKRAKPFEAIWATNYCTFLRESQTGVIWAVGLNNYKQLAHA-KEA 281
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
++ P IK+ + K +A GQHH+L L++ + +A GR DYGRLG+ +V E
Sbjct: 282 ER-----VLIP--IKT-NLKDIKQIAGGQHHTLVLDNSMRCFAIGRPDYGRLGIGDVKEV 333
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V+E PI + KTI + CG S+AI ++G LY WGMG+ QLG G DD L
Sbjct: 334 VSELMPIKEISGKTIF-VGCGEACSYAITNDGKLYSWGMGSNNQLGVGDGDDEL 386
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 176/382 (46%), Gaps = 58/382 (15%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P +E++ V I +G H ++LT G++ + GC ++G LGR T
Sbjct: 54 GQLGL-GEDVLERKRPAIVENIPNPVDICAGGMHCLVLTKSGDIYSFGCNDEGALGRDTS 112
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S + P V L K + ++ + G + A+G +++ +G
Sbjct: 113 EEGSESL--------PALVNLPGKALRISAGDSHSACLLEDGRVFAWGSFRDSHGNMG-- 162
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-- 325
+ GN TP I L +ASG H + L + GK++ G + G+LG
Sbjct: 163 ---LTIDGNK--RTP--INLLDGMICCSIASGADHLVILTTSGKVFTVGCAEQGQLGRIS 215
Query: 326 --------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGWGMGNGYQL 376
+ + P + + K +I N +F +S+ GV++ G+ N QL
Sbjct: 216 ERSVGGEGRRGKRDLLRPDQLIIKRAKPFEAIWATNYCTFLRESQTGVIWAVGLNNYKQL 275
Query: 377 GNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+ KE + +L++ + +A GR DYGRLG+ +V E V+
Sbjct: 276 AHAKEAERVLIPIKTNLKDIKQIAGGQHHTLVLDNSMRCFAIGRPDYGRLGIGDVKEVVS 335
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
E PI + KTI + CG S+AI ++G LY WGMG+ QLG G DD L P+ + K
Sbjct: 336 ELMPIKEISGKTIF-VGCGEACSYAITNDGKLYSWGMGSNNQLGVGDGDDELVPVPVVSK 394
Query: 473 QLNNYTVLQVASGGQHSVILAK 494
N +L A GGQHSV L +
Sbjct: 395 NTQNKRMLLAAGGGQHSVFLVE 416
>gi|322786159|gb|EFZ12764.1| hypothetical protein SINV_00887 [Solenopsis invicta]
Length = 476
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 240/397 (60%), Gaps = 24/397 (6%)
Query: 6 KKVLRKQAENPSQK----------VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPD 55
+K ++ AE+P+Q P L+ + GGV+L GQGD GQLGLG D
Sbjct: 47 RKSRKRTAEDPTQADKAPKQSKKKQQQVITVKPDLRTLSIGGVMLVFGQGDFGQLGLGED 106
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQ 114
VME+ A + D +++ G MH VCL + G+V T+GCNDEGALGR+ + SE +P
Sbjct: 107 VMEKTRPAAISDYQDIIATAAGAMHNVCLRKTGEVLTFGCNDEGALGRDTTKEGSETVPG 166
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
V LP KA+Q++AGDSH+ ALLEDG V+AWG+FRD+HGSMGL +G ++ P+++ S +
Sbjct: 167 IVELPGKAIQVTAGDSHTAALLEDGRVFAWGTFRDTHGSMGLTLKGNERFPVEILSDVKV 226
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-- 231
VKIASG DH V+L G + T G EQGQLGR+ R+ASRN R+G+ L PG V K
Sbjct: 227 VKIASGNDHLVLLNENGRVYTCGRGEQGQLGRVAARTASRNTRQGIGLLLTPGVVEFKIR 286
Query: 232 -RKHIDDVFTGVYNTFIS--SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ + DD++ G + TF KG I FGLNN+ Q+G +S++ F P + K+
Sbjct: 287 QKLYFDDIWAGNFCTFAKEHKKGDIYVFGLNNFHQIGLKESDIH-------FHPQVSKTF 339
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
S K + ++SG+HH+LAL+ +G+++ GR +YGRLGL E T +P+L
Sbjct: 340 SGKVWKHISSGEHHTLALDDDGQVFVMGRKEYGRLGLGPNCSDAEELTLVPALNSTKCID 399
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ G+ SFA+ G LY WGMG LG G +D+L
Sbjct: 400 VGTGSRESFAVTESGDLYAWGMGTNGNLGTGDVEDVL 436
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 181/400 (45%), Gaps = 65/400 (16%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
V+ G F G +GL + ++KT P + I+ A+GA H V L G +LT GC
Sbjct: 92 VFGQGDF----GQLGLGEDVMEKTRPAAISDYQDIIATAAGAMHNVCLRKTGEVLTFGCN 147
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL- 258
++G LGR T + S PG V L K I + + G + A+G
Sbjct: 148 DEGALGRDTTKEGSETV--------PGIVELPGKAIQVTAGDSHTAALLEDGRVFAWGTF 199
Query: 259 -NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ + +G + GN F ++ LSD K +ASG H + LN G++Y GR
Sbjct: 200 RDTHGSMG-----LTLKGNERF----PVEILSDVKVVKIASGNDHLVLLNENGRVYTCGR 250
Query: 318 HDYGRLGL-------KNVSEPV-TEPTP----IPSLQDKTITSIACGNCVSFAID-SEGV 364
+ G+LG +N + + TP Q I GN +FA + +G
Sbjct: 251 GEQGQLGRVAARTASRNTRQGIGLLLTPGVVEFKIRQKLYFDDIWAGNFCTFAKEHKKGD 310
Query: 365 LYGWGMGNGYQLGNGKEDDI---------------------------LNSEGKIYAFGRH 397
+Y +G+ N +Q+G KE DI L+ +G+++ GR
Sbjct: 311 IYVFGLNNFHQIGL-KESDIHFHPQVSKTFSGKVWKHISSGEHHTLALDDDGQVFVMGRK 369
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+YGRLGL E T +P+L + G+ SFA+ G LY WGMG LG
Sbjct: 370 EYGRLGLGPNCSDAEELTLVPALNSTKCIDVGTGSRESFAVTESGDLYAWGMGTNGNLGT 429
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
G +D+LEP+ ++GKQL V++V GGQH++ LA +P
Sbjct: 430 GDVEDVLEPVLVKGKQLEGKAVVRVNGGGQHTLALATIRP 469
>gi|195376815|ref|XP_002047188.1| GJ13299 [Drosophila virilis]
gi|194154346|gb|EDW69530.1| GJ13299 [Drosophila virilis]
Length = 485
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 229/354 (64%), Gaps = 15/354 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GDTGQLGLG DV+ERK AL+E + N V+V GGMH + LT++G VY++GCN
Sbjct: 43 GNVLVCGTGDTGQLGLGEDVLERKRPALIESIPNPVDVCAGGMHCLVLTKNGDVYSFGCN 102
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ +E SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRDSHG+MG
Sbjct: 103 DEGALGRDTSEEGSESTPALIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG 162
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++TP+ L IASGADH V+LT+ G + T GC EQGQLGRI +RS
Sbjct: 163 LTIDGNKRTPINLLEGMVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRIAERSVGGE 222
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEV 271
RRG L P ++ +KR K + ++ Y TF+ S I A GLNNY QL A E
Sbjct: 223 GRRGKRDLLRPDQLIIKRAKPFEAIWATNYCTFLRESQTEVIWAVGLNNYKQLAHA-KEA 281
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
++ P + L D K +A GQHH+L L++ + +A GR DYGRLG+ +V E
Sbjct: 282 ER-----VLIP-IKTELKDVK--QIAGGQHHTLVLDNAMRCFAIGRPDYGRLGVGDVKEV 333
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V+E TPI L KT T + CG S+AI ++G LY WGMG+ +QLG G DD L
Sbjct: 334 VSELTPIKELSGKT-TFVGCGEACSYAITTDGKLYSWGMGSNHQLGVGDGDDEL 386
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 178/382 (46%), Gaps = 58/382 (15%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P +ES+ V + +G H ++LT G++ + GC ++G LGR T
Sbjct: 54 GQLGL-GEDVLERKRPALIESIPNPVDVCAGGMHCLVLTKNGDVYSFGCNDEGALGRDTS 112
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S + P + L K + ++ + G + A+G +++ +G
Sbjct: 113 EEGSEST--------PALIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG-- 162
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-- 325
+ GN TP I L +ASG H + L + GK++ G + G+LG
Sbjct: 163 ---LTIDGNK--RTP--INLLEGMVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRIA 215
Query: 326 --------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQL 376
+ + P + + K +I N +F +S+ V++ G+ N QL
Sbjct: 216 ERSVGGEGRRGKRDLLRPDQLIIKRAKPFEAIWATNYCTFLRESQTEVIWAVGLNNYKQL 275
Query: 377 GNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+ KE + +L++ + +A GR DYGRLG+ +V E V+
Sbjct: 276 AHAKEAERVLIPIKTELKDVKQIAGGQHHTLVLDNAMRCFAIGRPDYGRLGVGDVKEVVS 335
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
E TPI L KT T + CG S+AI ++G LY WGMG+ +QLG G DD LEP+ + K
Sbjct: 336 ELTPIKELSGKT-TFVGCGEACSYAITTDGKLYSWGMGSNHQLGVGDGDDELEPVVVSSK 394
Query: 473 QLNNYTVLQVASGGQHSVILAK 494
N +L + GGQHSV L +
Sbjct: 395 NTQNKRMLMASGGGQHSVFLVE 416
>gi|291190112|ref|NP_001167184.1| regulator of chromosome condensation [Salmo salar]
gi|223648524|gb|ACN11020.1| Regulator of chromosome condensation [Salmo salar]
Length = 420
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 233/359 (64%), Gaps = 24/359 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VL GQGD GQLGLG D+MERK ALV + VV+V GGMHTVCL++ G +YT+GCN
Sbjct: 37 GLVLVLGQGDVGQLGLGEDIMERKRPALVTLPEGVVQVAAGGMHTVCLSDTGNIYTFGCN 96
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGRE E SE +P V+L ++ VQ+SAGDSH+ AL +DG VY WGSFRD+ G +G
Sbjct: 97 DEGALGRETTEEGSEMVPGKVSLDERVVQVSAGDSHTAALTDDGAVYIWGSFRDNSGVIG 156
Query: 156 LKGEGIQK--TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K P+K+ ++KIASG DH VMLT+ G+L T+GC EQGQLGR+ + A+
Sbjct: 157 LL-EPMKKVTVPVKVPMKGPVMKIASGNDHLVMLTTSGDLYTSGCGEQGQLGRVPELFAN 215
Query: 214 RNARRG-MSFLEPGEVPLKRK---HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
R R+G + L P V ++ + H D F G Y T +S +G + FGL+NY QLG
Sbjct: 216 RGGRKGLLRLLIPQIVKVQSRGKVHFTDAFCGAYMTIAVSKEGHVYGFGLSNYHQLG--- 272
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTM----LASGQHHSLALNSEGKIYAFGRHDYGRLG 324
K NTCF IK + K T+ + GQHH++ L+S GK+Y+ GR +YGRLG
Sbjct: 273 ---TKLINTCFVP---IKLTTFKNSTINWIGFSGGQHHTVCLDSAGKVYSLGRAEYGRLG 326
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
L +E +EPTP+ L + +ACG VS+A+ +G +Y WGMG QLG G+EDD
Sbjct: 327 LGQGAEEKSEPTPVEGLDVAQV--VACGASVSYAVTKQGSVYAWGMGTNLQLGTGEEDD 383
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 197/426 (46%), Gaps = 58/426 (13%)
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
E G V G D G LG + P V LP+ VQ++AG H+V L + G +Y +G
Sbjct: 35 EKGLVLVLGQGDVGQLGLGEDIMERKRPALVTLPEGVVQVAAGGMHTVCLSDTGNIYTFG 94
Query: 146 SFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ G++G + EG + P K+ +V++++G H LT G + G
Sbjct: 95 C--NDEGALGRETTEEGSEMVPGKVSLDERVVQVSAGDSHTAALTDDGAVYIWG------ 146
Query: 204 LGRITQRSASRNARRGMSFLEPGE-------VPLKRKHIDDVFTGVYNTFISSKGSILAF 256
+ R+ + LEP + VP+K + + +++ G +
Sbjct: 147 --------SFRDNSGVIGLLEPMKKVTVPVKVPMKGPVMKIASGNDHLVMLTTSGDLYTS 198
Query: 257 GLNNYSQLGEADSEVQ----KSGNTCFFTPHLIKSLSDKK--FTMLASGQHHSLALNSEG 310
G QLG + G P ++K S K FT G + ++A++ EG
Sbjct: 199 GCGEQGQLGRVPELFANRGGRKGLLRLLIPQIVKVQSRGKVHFTDAFCGAYMTIAVSKEG 258
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y FG +Y +LG K ++ P + + ++ TI N + F+
Sbjct: 259 HVYGFGLSNYHQLGTKLINTCFV-PIKLTTFKNSTI------NWIGFS------------ 299
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
G L+S GK+Y+ GR +YGRLGL +E +EPTP+ L + +AC
Sbjct: 300 ------GGQHHTVCLDSAGKVYSLGRAEYGRLGLGQGAEEKSEPTPVEGLDVAQV--VAC 351
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G VS+A+ +G +Y WGMG QLG G+EDD P+++ GKQL N VL VASGGQH+V
Sbjct: 352 GASVSYAVTKQGSVYAWGMGTNLQLGTGEEDDEWSPVEMTGKQLENRIVLMVASGGQHTV 411
Query: 491 ILAKPK 496
+L K K
Sbjct: 412 LLVKDK 417
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG E+ VE LD V G + +T+ G VY
Sbjct: 307 CLDSAGKVYSLGRAEYGRLGLGQGAEEKSEPTPVEGLDVAQVVACGASVSYAVTKQGSVY 366
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D E+ P + L + V +++G H+V L++D
Sbjct: 367 AWGMGTNLQLGT-GEEDDEWSPVEMTGKQLENRIVLMVASGGQHTVLLVKD 416
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 38/195 (19%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAID 360
HS +G + G+ D G+LGL E + E P + + +A G
Sbjct: 29 HSSHGQEKGLVLVLGQGDVGQLGL---GEDIMERKRPALVTLPEGVVQVAAG-------- 77
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G L+ G IY FG +D G LG + +E +E P
Sbjct: 78 ------------------GMHTVCLSDTGNIYTFGCNDEGALG-RETTEEGSEMVPGKVS 118
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK---IEGKQLNNY 477
D+ + ++ G+ + A+ +G +Y WG N +LEPMK + K
Sbjct: 119 LDERVVQVSAGDSHTAALTDDGAVYIWGSFR----DNSGVIGLLEPMKKVTVPVKVPMKG 174
Query: 478 TVLQVASGGQHSVIL 492
V+++ASG H V+L
Sbjct: 175 PVMKIASGNDHLVML 189
>gi|326932912|ref|XP_003212555.1| PREDICTED: regulator of chromosome condensation-like [Meleagris
gallopavo]
Length = 417
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/362 (49%), Positives = 237/362 (65%), Gaps = 20/362 (5%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+T G+VL GQGD GQLGLG DVMERK ALV+ + +V+V GGMHTVCL+E GK+YT
Sbjct: 30 RTQPGLVLVLGQGDVGQLGLGQDVMERKKPALVQLPELMVQVEAGGMHTVCLSETGKIYT 89
Query: 93 WGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+GCNDEGALGR+ +E SE P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++
Sbjct: 90 FGCNDEGALGRDTSEEGSECTPGPVELQEKVVQVSAGDSHTAALTDDGRVFIWGSFRDNN 149
Query: 152 GSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL E ++K+ P L+ +VKI SG DH VMLT G+L T GC EQGQLGR+
Sbjct: 150 GVIGLL-EPMKKSTVPALLQLNVPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPA 208
Query: 210 RSASRNARRGMS-FLEPGEVPLKRK---HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
++R R+G+ L P VP++ K D F G Y TF I+ +G I FGL+NY QL
Sbjct: 209 LFSNRGGRKGLQRLLVPQRVPVRGKGKMRFQDAFCGAYFTFAITREGHIYGFGLSNYHQL 268
Query: 265 GEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
G +E C F+P + S S K + + GQHH++ ++SEGK Y+ GR +YGR
Sbjct: 269 GTQGTE------PC-FSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGR 321
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LGL +E + PT IP L +I+S+ACG V +A+ S+G + WGMG +QLG G+E+
Sbjct: 322 LGLGEGAEEKSTPTVIPDL--PSISSVACGASVGYAVSSDGRAFAWGMGTNHQLGTGEEE 379
Query: 383 DI 384
D+
Sbjct: 380 DV 381
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 180/379 (47%), Gaps = 64/379 (16%)
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
+K P ++ +V++ +G H V L+ G + T GC ++G LGR T S
Sbjct: 56 RKKPALVQLPELMVQVEAGGMHTVCLSETGKIYTFGCNDEGALGRDTSEEGSE------- 108
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCF 279
PG V L+ K + + ++ G + +G +N +G + ++KS
Sbjct: 109 -CTPGPVELQEKVVQVSAGDSHTAALTDDGRVFIWGSFRDNNGVIGLLEP-MKKS----- 161
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------L 325
P L++ + + SG H + L +G ++ G + G+LG L
Sbjct: 162 TVPALLQL--NVPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFSNRGGRKGL 219
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------- 378
+ + P + P+ CG +FAI EG +YG+G+ N +QLG
Sbjct: 220 QRLLVP--QRVPVRGKGKMRFQDAFCGAYFTFAITREGHIYGFGLSNYHQLGTQGTEPCF 277
Query: 379 --------------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I
Sbjct: 278 SPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTVI 337
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
P L +I+S+ACG V +A+ S+G + WGMG +QLG G+E+D+ P+++ GKQL N
Sbjct: 338 PDL--PSISSVACGASVGYAVSSDGRAFAWGMGTNHQLGTGEEEDVWSPVEMTGKQLENR 395
Query: 478 TVLQVASGGQHSVILAKPK 496
VL V+SGGQH+V+L K K
Sbjct: 396 LVLAVSSGGQHTVLLVKDK 414
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T ++ DL ++ V G ++ DG+ +
Sbjct: 304 CVDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTVIPDLPSISSVACGASVGYAVSSDGRAF 363
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G+ E + V + K ++ +S+G H+V L++D
Sbjct: 364 AWGMGTNHQLG---TGEEEDVWSPVEMTGKQLENRLVLAVSSGGQHTVLLVKD 413
>gi|348529242|ref|XP_003452123.1| PREDICTED: regulator of chromosome condensation-like [Oreochromis
niloticus]
Length = 418
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 174/354 (49%), Positives = 228/354 (64%), Gaps = 16/354 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL GQGD GQLGLG DV+ERK AL+ + +V+V GGMHTVCL+E G +YT+GCN
Sbjct: 37 GQVLVLGQGDVGQLGLGEDVIERKKPALLSLPEKIVQVTAGGMHTVCLSETGNIYTFGCN 96
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ +E SE IP V L +K VQ+SAGDSH+ AL EDG+VY WGSFRD++G +G
Sbjct: 97 DEGALGRDTSEEGSEMIPGKVTLNEKVVQVSAGDSHTAALTEDGSVYIWGSFRDNNGVIG 156
Query: 156 -LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
L+ P+K+ +VKI SG DH VM+T GNL T+G EQGQLGR+ + ++R
Sbjct: 157 LLEPMKTCALPVKVPLTEHVVKIVSGNDHMVMVTLEGNLYTSGSAEQGQLGRVPEHFSNR 216
Query: 215 NARRGMS-FLEPGEVPLKRK-HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
R+G+ L P V +K K H D F G Y TF +S +G + FGL+NY QLG
Sbjct: 217 GGRKGLERLLVPQMVKVKGKVHFVDAFCGAYFTFAVSKEGHVYGFGLSNYHQLG------ 270
Query: 272 QKSGNTCFFTPHL--IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
KS CF L K+ S + + GQHH+L L++EG++Y+ GR +YGRLGL +
Sbjct: 271 TKSTKMCFVPVKLTCFKN-STTAWVDFSGGQHHTLCLDAEGQVYSLGRAEYGRLGLGEGA 329
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
E +EPTP+ ++ +ACG VS+A+ EG +Y WGMG QLG G+EDD
Sbjct: 330 EEKSEPTPVMGIE--LAKGVACGASVSYAVTREGSVYAWGMGTNLQLGTGEEDD 381
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 183/393 (46%), Gaps = 73/393 (18%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P L IV++ +G H V L+ GN+ T GC ++G LGR T
Sbjct: 48 GQLGL-GEDVIERKKPALLSLPEKIVQVTAGGMHTVCLSETGNIYTFGCNDEGALGRDTS 106
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S + PG+V L K + + ++ GS+ +G +N +G
Sbjct: 107 EEGSE--------MIPGKVTLNEKVVQVSAGDSHTAALTEDGSVYIWGSFRDNNGVIG-- 156
Query: 268 DSEVQKSGNTCFF------TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
+ + TC T H++K + SG H + + EG +Y G + G
Sbjct: 157 ---LLEPMKTCALPVKVPLTEHVVK---------IVSGNDHMVMVTLEGNLYTSGSAEQG 204
Query: 322 RLGL----------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+LG + E + P + CG +FA+ EG +YG+G+
Sbjct: 205 QLGRVPEHFSNRGGRKGLERLLVPQMVKVKGKVHFVDAFCGAYFTFAVSKEGHVYGFGLS 264
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ + L++EG++Y+ GR +YGRLG
Sbjct: 265 NYHQLGTKSTKMCFVPVKLTCFKNSTTAWVDFSGGQHHTLCLDAEGQVYSLGRAEYGRLG 324
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E +EPTP+ ++ +ACG VS+A+ EG +Y WGMG QLG G+EDD
Sbjct: 325 LGEGAEEKSEPTPVMGIE--LAKGVACGASVSYAVTREGSVYAWGMGTNLQLGTGEEDDE 382
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P+K+ GKQL N VL +SGGQH+V+L K K
Sbjct: 383 WSPVKMTGKQLENRAVLMASSGGQHTVLLVKDK 415
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG E+ V ++ V G + +T +G VY
Sbjct: 305 CLDAEGQVYSLGRAEYGRLGLGEGAEEKSEPTPVMGIELAKGVACGASVSYAVTREGSVY 364
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAVQI-SAGDSHSVALLED 138
WG LG E D E+ P + L +AV + S+G H+V L++D
Sbjct: 365 AWGMGTNLQLGT-GEEDDEWSPVKMTGKQLENRAVLMASSGGQHTVLLVKD 414
>gi|307173133|gb|EFN64233.1| Regulator of chromosome condensation [Camponotus floridanus]
Length = 479
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/382 (43%), Positives = 234/382 (61%), Gaps = 16/382 (4%)
Query: 12 QAENPSQKVFVTSEAV--PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD 69
+AE P +++ E P L+ + GV+L GQGD GQLGLG DV E+ A + +
Sbjct: 64 KAEKPPKQIKQKQEITVKPDLRSLSTNGVMLVFGQGDFGQLGLGEDVTEKMRPAAISEYQ 123
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAG 128
+++ + G MH VCL + G+V T+GCNDEGALGR+ + SE +P V LP+KA+Q++AG
Sbjct: 124 DIIAIAAGAMHNVCLRKTGEVLTFGCNDEGALGRDTTKEGSETVPGAVELPEKAIQVTAG 183
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLT 188
DSH+ ALLEDG V+AWG+FRD+HGSMGL G ++ P+++ +VKIASG+DH V+L+
Sbjct: 184 DSHTAALLEDGRVFAWGTFRDTHGSMGLTARGNERFPVEILPNVKVVKIASGSDHLVLLS 243
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPL---KRKHIDDVFTGVYN 244
G + T G EQGQLGR+ R+ASRN+R+G+ L PG V K+ DD++ G +
Sbjct: 244 ENGRIYTCGRAEQGQLGRVAARTASRNSRQGIGLLLTPGIVEFKISKKLQFDDIWAGNFC 303
Query: 245 TFIS--SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
TF KG I FGLNN+ Q+G +SE+ F P + K+ S K + ++SG+HH
Sbjct: 304 TFAKEYQKGDIYVFGLNNFHQIGLKNSEIN-------FHPQISKTFSGKIWRHISSGEHH 356
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++AL+ G++Y GR +YGRLGL E T +P+L + G+ SFA+
Sbjct: 357 TIALDDAGQVYVMGRKEYGRLGLGPNCLDAEELTLVPTLSSAKCIDVGAGSRESFAVTES 416
Query: 363 GVLYGWGMGNGYQLGNGKEDDI 384
G LY WG G LG G D+
Sbjct: 417 GDLYSWGTGTNGNLGTGDVKDV 438
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 179/399 (44%), Gaps = 63/399 (15%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
V+ G F G +GL + +K P + I+ IA+GA H V L G +LT GC
Sbjct: 95 VFGQGDF----GQLGLGEDVTEKMRPAAISEYQDIIAIAAGAMHNVCLRKTGEVLTFGCN 150
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL- 258
++G LGR T + S PG V L K I + + G + A+G
Sbjct: 151 DEGALGRDTTKEGSETV--------PGAVELPEKAIQVTAGDSHTAALLEDGRVFAWGTF 202
Query: 259 -NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ + +G + GN F ++ L + K +ASG H + L+ G+IY GR
Sbjct: 203 RDTHGSMG-----LTARGNERF----PVEILPNVKVVKIASGSDHLVLLSENGRIYTCGR 253
Query: 318 HDYGRLG---LKNVSEPVTEPTPI---PSLQDKTITS------IACGNCVSFAID-SEGV 364
+ G+LG + S + + P + + I+ I GN +FA + +G
Sbjct: 254 AEQGQLGRVAARTASRNSRQGIGLLLTPGIVEFKISKKLQFDDIWAGNFCTFAKEYQKGD 313
Query: 365 LYGWGMGNGYQLG-------------------------NGKEDDI-LNSEGKIYAFGRHD 398
+Y +G+ N +Q+G +G+ I L+ G++Y GR +
Sbjct: 314 IYVFGLNNFHQIGLKNSEINFHPQISKTFSGKIWRHISSGEHHTIALDDAGQVYVMGRKE 373
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
YGRLGL E T +P+L + G+ SFA+ G LY WG G LG G
Sbjct: 374 YGRLGLGPNCLDAEELTLVPTLSSAKCIDVGAGSRESFAVTESGDLYSWGTGTNGNLGTG 433
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
D+ EP+ ++GKQL TV++V+ GGQH++ LA +P
Sbjct: 434 DVKDVDEPVLVKGKQLEGKTVVRVSGGGQHTLALATTRP 472
>gi|363742391|ref|XP_427366.3| PREDICTED: regulator of chromosome condensation [Gallus gallus]
Length = 417
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/362 (48%), Positives = 237/362 (65%), Gaps = 20/362 (5%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+T G+VL GQGD GQLGLG DVMERK ALV+ + +V+V GGMHTVCL+E GK+YT
Sbjct: 30 RTQPGLVLVLGQGDVGQLGLGQDVMERKKPALVQLPELMVQVEAGGMHTVCLSETGKIYT 89
Query: 93 WGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+GCNDEGALGR+ +E SE P V L ++ VQ+SAGDSH+ AL +DG V+ WGSFRD++
Sbjct: 90 FGCNDEGALGRDTSEEGSECTPGPVELQERVVQVSAGDSHTAALTDDGRVFIWGSFRDNN 149
Query: 152 GSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL E ++K+ P L+ +VKI SG DH VMLT G+L T GC EQGQLGR+
Sbjct: 150 GVIGLL-EPMKKSTVPALLQLNVPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPA 208
Query: 210 RSASRNARRGMS-FLEPGEVPLKRK---HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
++R R+G+ L P VP++ K D F G Y TF I+ +G I FGL+NY QL
Sbjct: 209 LFSNRGGRKGLQRLLVPQRVPVRGKGKMRFQDAFCGAYFTFAITREGHIYGFGLSNYHQL 268
Query: 265 GEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
G +E C F+P + S S K + + GQHH++ ++SEGK Y+ GR +YGR
Sbjct: 269 GTQGTE------PC-FSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGR 321
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LGL +E + PT IP L +I+S+ACG V +A+ S+G + WGMG +QLG G+E+
Sbjct: 322 LGLGEGAEEKSTPTVIPDL--PSISSVACGASVGYAVSSDGRAFAWGMGTNHQLGTGEEE 379
Query: 383 DI 384
D+
Sbjct: 380 DV 381
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 179/379 (47%), Gaps = 64/379 (16%)
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
+K P ++ +V++ +G H V L+ G + T GC ++G LGR T S
Sbjct: 56 RKKPALVQLPELMVQVEAGGMHTVCLSETGKIYTFGCNDEGALGRDTSEEGSE------- 108
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCF 279
PG V L+ + + + ++ G + +G +N +G + ++KS
Sbjct: 109 -CTPGPVELQERVVQVSAGDSHTAALTDDGRVFIWGSFRDNNGVIGLLEP-MKKS----- 161
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------L 325
P L++ + + SG H + L +G ++ G + G+LG L
Sbjct: 162 TVPALLQL--NVPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFSNRGGRKGL 219
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------- 378
+ + P + P+ CG +FAI EG +YG+G+ N +QLG
Sbjct: 220 QRLLVP--QRVPVRGKGKMRFQDAFCGAYFTFAITREGHIYGFGLSNYHQLGTQGTEPCF 277
Query: 379 --------------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I
Sbjct: 278 SPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTVI 337
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
P L +I+S+ACG V +A+ S+G + WGMG +QLG G+E+D+ P+++ GKQL N
Sbjct: 338 PDL--PSISSVACGASVGYAVSSDGRAFAWGMGTNHQLGTGEEEDVWSPVEMTGKQLENR 395
Query: 478 TVLQVASGGQHSVILAKPK 496
VL V+SGGQH+ +L K K
Sbjct: 396 LVLAVSSGGQHTALLVKDK 414
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T ++ DL ++ V G ++ DG+ +
Sbjct: 304 CVDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTVIPDLPSISSVACGASVGYAVSSDGRAF 363
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G+ E + V + K ++ +S+G H+ L++D
Sbjct: 364 AWGMGTNHQLG---TGEEEDVWSPVEMTGKQLENRLVLAVSSGGQHTALLVKD 413
>gi|344245054|gb|EGW01158.1| Regulator of chromosome condensation [Cricetulus griseus]
Length = 454
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 185/407 (45%), Positives = 251/407 (61%), Gaps = 37/407 (9%)
Query: 3 HLLKKVLRKQAENPSQKVFVT----SEAVPTLK--------CKTGGGVVLTCGQGDTGQL 50
HL VL + + P +++ +A+P K KT G+VLT GQGD GQL
Sbjct: 22 HLFIAVLSLERKMPPKRIAKRRSPPEDAIPKSKKVKVSHRSHKTEPGLVLTLGQGDVGQL 81
Query: 51 GLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE--AEGD 108
GLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCNDEGALGR+ AEG
Sbjct: 82 GLGESVLERKKPALVTVLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSAEG- 140
Query: 109 SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PL 166
SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +GL E ++K+ P+
Sbjct: 141 SEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLL-EPMKKSMVPV 199
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEP 225
+++ +VK+ASG DH VMLT+ G+L T GC +QGQLGR+ + A+R R+G+ L P
Sbjct: 200 QVQLDMPVVKVASGNDHLVMLTTEGDLYTLGCGDQGQLGRVPELFANRGGRQGLERLLVP 259
Query: 226 GEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
V LK R D F G Y TF IS +G + FGL+NY QLG G
Sbjct: 260 RCVLLKARGCRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG-------TPGTAS 312
Query: 279 FFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRLGL +E + PT
Sbjct: 313 CFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPT 372
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 373 LISRL--PIVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEED 417
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 193/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + + +V+ +G H V L
Sbjct: 59 SHRSHKTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVTVLQDVVQAEAGGMHTVCL 115
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 116 SQSGQVYSFGCNDEGALGRDTSAEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 167
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 168 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDMPVVKVASGNDHLVM 219
Query: 306 LNSEGKIYAFGRHDYGRLG--------------LKNVSEPVTEPTPIPSLQDKTITSIA- 350
L +EG +Y G D G+LG L+ + P + + A
Sbjct: 220 LTTEGDLYTLGCGDQGQLGRVPELFANRGGRQGLERLLVPRCVLLKARGCRGRVRFQDAF 279
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 280 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHT 339
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
I ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 340 ICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PIVSSVACGASVGYAVSKDG 397
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 398 RVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 451
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 341 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPIVSSVACGASVGYAVSKDGRVF 400
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 401 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 450
>gi|281351636|gb|EFB27220.1| hypothetical protein PANDA_001197 [Ailuropoda melanoleuca]
Length = 397
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 11 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 70
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 71 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 130
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 131 LL-EPMKKSMVPVQVQLTMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 189
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 190 RGGRQGLERLLVPKRVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLG 249
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 250 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 302
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 303 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 360
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 189/418 (45%), Gaps = 76/418 (18%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + IV+ +G H V L
Sbjct: 2 SHRSHSTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVPIPEDIVQAEAGGMHTVCL 58
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 59 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 110
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS--DKKFTM----LASGQH 301
+ G + +G S +G P + KS+ + TM +ASG
Sbjct: 111 TEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMVPVQVQLTMPVVKVASGND 158
Query: 302 HSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTI 346
H + L ++G +Y G + G+LG + E + P + S
Sbjct: 159 HLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKRVMLKSRGSRGHVRF 218
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------G 379
CG +FAI EG +YG+G+ N +QLG G
Sbjct: 219 QDAFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVGFSGG 278
Query: 380 KEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ + ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+
Sbjct: 279 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAV 336
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G ++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 337 TKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 394
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 284 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 343
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 344 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 393
>gi|301755120|ref|XP_002913415.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Ailuropoda melanoleuca]
Length = 502
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 116 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 175
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 176 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 235
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 236 LL-EPMKKSMVPVQVQLTMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 294
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 295 RGGRQGLERLLVPKRVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLG 354
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 355 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 407
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 408 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 465
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 199/436 (45%), Gaps = 81/436 (18%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 93 PPEDALPKSKKVKVSH-RSHST---EPGMVLTLG--QGDVGQLGL-GENVMERKKPALVP 145
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 146 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 197
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L+ K + + ++ G + +G S +G P + KS+
Sbjct: 198 LQEKVVQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMV 245
Query: 290 --DKKFTM----LASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVT 333
+ TM +ASG H + L ++G +Y G + G+LG + E +
Sbjct: 246 PVQVQLTMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 305
Query: 334 EPTPIP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------- 378
P + S CG +FAI EG +YG+G+ N +QLG
Sbjct: 306 VPKRVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQ 365
Query: 379 -----------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 366 NLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL 425
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
++S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL
Sbjct: 426 --PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVL 483
Query: 481 QVASGGQHSVILAKPK 496
V+SGGQH+V+L K K
Sbjct: 484 SVSSGGQHTVLLVKDK 499
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 389 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 448
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 449 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 498
>gi|327315350|ref|NP_001192141.1| regulator of chromosome condensation [Canis lupus familiaris]
Length = 421
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 237/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GIVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLTMPVVKVASGNDHLVMLTVDGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+EDD
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEDD 384
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 198/436 (45%), Gaps = 81/436 (18%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDALPKSKKVKVSH-RSHST---EPGIVLTLG--QGDVGQLGL-GENVMERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L+ K + + ++ G + +G S +G P + KS+
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMV 164
Query: 290 --DKKFTM----LASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVT 333
+ TM +ASG H + L +G +Y G + G+LG + E +
Sbjct: 165 PVQVQLTMPVVKVASGNDHLVMLTVDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 224
Query: 334 EPTPIP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------- 378
P + S CG +FAI EG +YG+G+ N +QLG
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQ 284
Query: 379 -----------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL 344
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
++S+ACG V +A+ +G ++ WGMG YQLG G+EDD P+++ GKQL N VL
Sbjct: 345 --PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENRVVL 402
Query: 481 QVASGGQHSVILAKPK 496
V+SGGQH+V+L K K
Sbjct: 403 SVSSGGQHTVLLVKDK 418
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQEDDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|354472395|ref|XP_003498425.1| PREDICTED: regulator of chromosome condensation-like isoform 1
[Cricetulus griseus]
Length = 421
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/365 (48%), Positives = 236/365 (64%), Gaps = 25/365 (6%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
KT G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY+
Sbjct: 31 KTEPGLVLTLGQGDVGQLGLGESVLERKKPALVTVLQDVVQAEAGGMHTVCLSQSGQVYS 90
Query: 93 WGCNDEGALGRE--AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+GCNDEGALGR+ AEG SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD+
Sbjct: 91 FGCNDEGALGRDTSAEG-SEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDN 149
Query: 151 HGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC +QGQLGR+
Sbjct: 150 NGVIGLL-EPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTEGDLYTLGCGDQGQLGRVP 208
Query: 209 QRSASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+ A+R R+G+ L P V LK R D F G Y TF IS +G + FGL+N
Sbjct: 209 ELFANRGGRQGLERLLVPRCVLLKARGCRGRVRFQDAFCGAYFTFAISREGHVYGFGLSN 268
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
Y QLG G F P + S S K + + GQHH++ ++SEGK Y+ GR
Sbjct: 269 YHQLG-------TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRA 321
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG
Sbjct: 322 EYGRLGLGEGAEEKSIPTLISRL--PIVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGT 379
Query: 379 GKEDD 383
G+E+D
Sbjct: 380 GQEED 384
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHKTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVT 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 VLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSAEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L +EG +Y G D G+LG L+ + P
Sbjct: 169 QLDMPVVKVASGNDHLVMLTTEGDLYTLGCGDQGQLGRVPELFANRGGRQGLERLLVPRC 228
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ + A CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VLLKARGCRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ I ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PI 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLTVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPIVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|157427942|ref|NP_001098878.1| regulator of chromosome condensation [Bos taurus]
gi|157279328|gb|AAI53216.1| RCC1 protein [Bos taurus]
gi|296490013|tpg|DAA32126.1| TPA: regulator of chromosome condensation 1 [Bos taurus]
Length = 422
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 240/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
GVVLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V+L +K +Q+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT G+L T G EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF ISS+G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TQGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT IP L T++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSVPTLIPRL--PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 200/438 (45%), Gaps = 85/438 (19%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDALPKSKKVKVS----HRSHGTEPGVVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVD 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L+ K I + ++ G + +G S +G P + KS+
Sbjct: 117 LQEKVIQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMV 164
Query: 290 DKKFTM------LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EP 335
+ + +ASG H + L +G +Y G + G+LG V E E
Sbjct: 165 PVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLG--RVPELFANRGGRQGLER 222
Query: 336 TPIPS---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------- 378
+P L+ + CG +FAI SEG +YG+G+ N +QLG
Sbjct: 223 LLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFV 282
Query: 379 -------------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
G+ + ++SEGK Y+ GR +YGRLGL +E + PT IP
Sbjct: 283 PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIP 342
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
L T++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N
Sbjct: 343 RL--PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV 400
Query: 479 VLQVASGGQHSVILAKPK 496
VL V+SGGQH+V+L K K
Sbjct: 401 VLTVSSGGQHTVLLVKDK 418
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|344287488|ref|XP_003415485.1| PREDICTED: regulator of chromosome condensation isoform 1
[Loxodonta africana]
Length = 421
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 239/361 (66%), Gaps = 23/361 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G++Y++GCN
Sbjct: 35 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDVVQAEAGGMHTVCLSKTGQIYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V+L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSLEGSEMVPGKVDLQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L + GC EQGQLGR+ + ++
Sbjct: 155 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAEGDLYSLGCGEQGQLGRVPELFSN 213
Query: 214 RNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK + DVF G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGYVRFQDVFCGAYFTFAISCEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT IP L ++S+ACG V +A+ +G + WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSTPTLIPRL--PAVSSVACGASVGYAVTKDGRAFAWGMGTNYQLGTGQDED 384
Query: 384 I 384
+
Sbjct: 385 V 385
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 203/433 (46%), Gaps = 76/433 (17%)
Query: 113 PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLES 170
P+ K V++S H E G V G + G +GL GE + +K P +
Sbjct: 13 PEDATPKSKKVKVS----HRSHNTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVPI 65
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V L
Sbjct: 66 PEDVVQAEAGGMHTVCLSKTGQIYSFGCNDEGALGRDTSLEGSE--------MVPGKVDL 117
Query: 231 KRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 118 QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQ 169
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIPS 340
D +ASG H + L +EG +Y+ G + G+LG V E + E +P
Sbjct: 170 LDVPVVKVASGNDHLVMLTAEGDLYSLGCGEQGQLG--RVPELFSNRGGRQGLERLLVPK 227
Query: 341 ---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------- 378
L+ + + CG +FAI EG +YG+G+ N +QLG
Sbjct: 228 CVMLKSRGSRGYVRFQDVFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQNLT 287
Query: 379 --------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
G+ + ++SEGK Y+ GR +YGRLGL +E + PT IP L
Sbjct: 288 SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTLIPRL--P 345
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
++S+ACG V +A+ +G + WGMG YQLG G+++D+ P+++ GKQL N VL V+
Sbjct: 346 AVSSVACGASVGYAVTKDGRAFAWGMGTNYQLGTGQDEDVWSPVEMTGKQLENRVVLSVS 405
Query: 484 SGGQHSVILAKPK 496
SGGQH+V+L K K
Sbjct: 406 SGGQHTVLLVKDK 418
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T L+ L V V G +T+DG+ +
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTLIPRLPAVSSVACGASVGYAVTKDGRAF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E + V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDVWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|354472397|ref|XP_003498426.1| PREDICTED: regulator of chromosome condensation-like isoform 2
[Cricetulus griseus]
Length = 434
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/365 (48%), Positives = 236/365 (64%), Gaps = 25/365 (6%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
KT G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY+
Sbjct: 44 KTEPGLVLTLGQGDVGQLGLGESVLERKKPALVTVLQDVVQAEAGGMHTVCLSQSGQVYS 103
Query: 93 WGCNDEGALGRE--AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+GCNDEGALGR+ AEG SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD+
Sbjct: 104 FGCNDEGALGRDTSAEG-SEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDN 162
Query: 151 HGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC +QGQLGR+
Sbjct: 163 NGVIGLL-EPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTEGDLYTLGCGDQGQLGRVP 221
Query: 209 QRSASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+ A+R R+G+ L P V LK R D F G Y TF IS +G + FGL+N
Sbjct: 222 ELFANRGGRQGLERLLVPRCVLLKARGCRGRVRFQDAFCGAYFTFAISREGHVYGFGLSN 281
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
Y QLG G F P + S S K + + GQHH++ ++SEGK Y+ GR
Sbjct: 282 YHQLG-------TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRA 334
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG
Sbjct: 335 EYGRLGLGEGAEEKSIPTLISRL--PIVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGT 392
Query: 379 GKEDD 383
G+E+D
Sbjct: 393 GQEED 397
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 193/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + + +V+ +G H V L
Sbjct: 39 SHRSHKTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVTVLQDVVQAEAGGMHTVCL 95
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 96 SQSGQVYSFGCNDEGALGRDTSAEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 147
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 148 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDMPVVKVASGNDHLVM 199
Query: 306 LNSEGKIYAFGRHDYGRLG--------------LKNVSEPVTEPTPIPSLQDKTITSIA- 350
L +EG +Y G D G+LG L+ + P + + A
Sbjct: 200 LTTEGDLYTLGCGDQGQLGRVPELFANRGGRQGLERLLVPRCVLLKARGCRGRVRFQDAF 259
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 260 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHT 319
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
I ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 320 ICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PIVSSVACGASVGYAVSKDG 377
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 378 RVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 431
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 321 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPIVSSVACGASVGYAVSKDGRVF 380
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 381 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 430
>gi|354472399|ref|XP_003498427.1| PREDICTED: regulator of chromosome condensation-like isoform 3
[Cricetulus griseus]
Length = 449
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/365 (48%), Positives = 236/365 (64%), Gaps = 25/365 (6%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
KT G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY+
Sbjct: 59 KTEPGLVLTLGQGDVGQLGLGESVLERKKPALVTVLQDVVQAEAGGMHTVCLSQSGQVYS 118
Query: 93 WGCNDEGALGRE--AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+GCNDEGALGR+ AEG SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD+
Sbjct: 119 FGCNDEGALGRDTSAEG-SEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDN 177
Query: 151 HGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC +QGQLGR+
Sbjct: 178 NGVIGLL-EPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTEGDLYTLGCGDQGQLGRVP 236
Query: 209 QRSASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+ A+R R+G+ L P V LK R D F G Y TF IS +G + FGL+N
Sbjct: 237 ELFANRGGRQGLERLLVPRCVLLKARGCRGRVRFQDAFCGAYFTFAISREGHVYGFGLSN 296
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
Y QLG G F P + S S K + + GQHH++ ++SEGK Y+ GR
Sbjct: 297 YHQLG-------TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRA 349
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG
Sbjct: 350 EYGRLGLGEGAEEKSIPTLISRL--PIVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGT 407
Query: 379 GKEDD 383
G+E+D
Sbjct: 408 GQEED 412
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 193/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + + +V+ +G H V L
Sbjct: 54 SHRSHKTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVTVLQDVVQAEAGGMHTVCL 110
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 111 SQSGQVYSFGCNDEGALGRDTSAEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 162
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 163 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDMPVVKVASGNDHLVM 214
Query: 306 LNSEGKIYAFGRHDYGRLG--------------LKNVSEPVTEPTPIPSLQDKTITSIA- 350
L +EG +Y G D G+LG L+ + P + + A
Sbjct: 215 LTTEGDLYTLGCGDQGQLGRVPELFANRGGRQGLERLLVPRCVLLKARGCRGRVRFQDAF 274
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 275 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHT 334
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
I ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 335 ICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PIVSSVACGASVGYAVSKDG 392
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 393 RVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 446
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 336 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPIVSSVACGASVGYAVSKDGRVF 395
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 396 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 445
>gi|344287492|ref|XP_003415487.1| PREDICTED: regulator of chromosome condensation isoform 3
[Loxodonta africana]
Length = 438
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 239/361 (66%), Gaps = 23/361 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G++Y++GCN
Sbjct: 52 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDVVQAEAGGMHTVCLSKTGQIYSFGCN 111
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V+L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 112 DEGALGRDTSLEGSEMVPGKVDLQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L + GC EQGQLGR+ + ++
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAEGDLYSLGCGEQGQLGRVPELFSN 230
Query: 214 RNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK + DVF G Y TF IS +G + FGL+NY QLG
Sbjct: 231 RGGRQGLERLLVPKCVMLKSRGSRGYVRFQDVFCGAYFTFAISCEGHVYGFGLSNYHQLG 290
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 291 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 343
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT IP L ++S+ACG V +A+ +G + WGMG YQLG G+++D
Sbjct: 344 GLGEGAEEKSTPTLIPRL--PAVSSVACGASVGYAVTKDGRAFAWGMGTNYQLGTGQDED 401
Query: 384 I 384
+
Sbjct: 402 V 402
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 197/416 (47%), Gaps = 72/416 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 43 SHRSHNTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVPIPEDVVQAEAGGMHTVCL 99
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 100 SKTGQIYSFGCNDEGALGRDTSLEGSE--------MVPGKVDLQEKVVQVSAGDSHTAAL 151
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 152 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 203
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIPS---LQDK------TITS 348
L +EG +Y+ G + G+LG V E + E +P L+ +
Sbjct: 204 LTAEGDLYSLGCGEQGQLG--RVPELFSNRGGRQGLERLLVPKCVMLKSRGSRGYVRFQD 261
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKE 381
+ CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 262 VFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVGFSGGQH 321
Query: 382 DDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ ++SEGK Y+ GR +YGRLGL +E + PT IP L ++S+ACG V +A+
Sbjct: 322 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTLIPRL--PAVSSVACGASVGYAVTK 379
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G + WGMG YQLG G+++D+ P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 380 DGRAFAWGMGTNYQLGTGQDEDVWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 435
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T L+ L V V G +T+DG+ +
Sbjct: 325 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTLIPRLPAVSSVACGASVGYAVTKDGRAF 384
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E + V + K ++ +S+G H+V L++D
Sbjct: 385 AWGMGTNYQLG---TGQDEDVWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 434
>gi|189491881|ref|NP_001121661.1| regulator of chromosome condensation [Rattus norvegicus]
gi|149024133|gb|EDL80630.1| rCG31301, isoform CRA_a [Rattus norvegicus]
gi|149024134|gb|EDL80631.1| rCG31301, isoform CRA_a [Rattus norvegicus]
gi|169642103|gb|AAI60834.1| LOC682908 protein [Rattus norvegicus]
Length = 421
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+EDD
Sbjct: 327 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDD 384
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 202/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D + +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 169 QLDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRC 228
Query: 338 IPSLQDKTITSIA-----CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ T + CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PV 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+EDD P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLEDGT 140
WG LG E D+ E + + ++ + +S+G H+V L++D T
Sbjct: 368 AWGMGTNYQLGTGQEDDAWSPVEMTGKQLE-NREVLTVSSGGQHTVLLVKDKT 419
>gi|410966599|ref|XP_003989818.1| PREDICTED: regulator of chromosome condensation isoform 2 [Felis
catus]
Length = 451
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 65 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 124
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 125 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 184
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 185 LL-EPMKKSMVPVQVQLTMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 243
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 244 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLG 303
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 304 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 356
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 357 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 414
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 191/419 (45%), Gaps = 78/419 (18%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + IV+ +G H V L
Sbjct: 56 SHRSHSTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVPIPEDIVQAEAGGMHTVCL 112
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 113 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 164
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS--DKKFTM----LASGQH 301
+ G + +G S +G P + KS+ + TM +ASG
Sbjct: 165 TEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMVPVQVQLTMPVVKVASGND 212
Query: 302 HSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIPSLQDK------T 345
H + L ++G +Y G + G+LG + E + P + L+ +
Sbjct: 213 HLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV-MLKSRGSRGHVR 271
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN--------------------------- 378
CG +FAI EG +YG+G+ N +QLG
Sbjct: 272 FQDAFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVGFSG 331
Query: 379 GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A
Sbjct: 332 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYA 389
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 390 VTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 448
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 338 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 397
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 398 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 447
>gi|344287490|ref|XP_003415486.1| PREDICTED: regulator of chromosome condensation isoform 2
[Loxodonta africana]
Length = 452
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 239/361 (66%), Gaps = 23/361 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G++Y++GCN
Sbjct: 66 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDVVQAEAGGMHTVCLSKTGQIYSFGCN 125
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V+L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 126 DEGALGRDTSLEGSEMVPGKVDLQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 185
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L + GC EQGQLGR+ + ++
Sbjct: 186 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAEGDLYSLGCGEQGQLGRVPELFSN 244
Query: 214 RNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK + DVF G Y TF IS +G + FGL+NY QLG
Sbjct: 245 RGGRQGLERLLVPKCVMLKSRGSRGYVRFQDVFCGAYFTFAISCEGHVYGFGLSNYHQLG 304
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 305 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 357
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT IP L ++S+ACG V +A+ +G + WGMG YQLG G+++D
Sbjct: 358 GLGEGAEEKSTPTLIPRL--PAVSSVACGASVGYAVTKDGRAFAWGMGTNYQLGTGQDED 415
Query: 384 I 384
+
Sbjct: 416 V 416
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 197/416 (47%), Gaps = 72/416 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 57 SHRSHNTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVPIPEDVVQAEAGGMHTVCL 113
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 114 SKTGQIYSFGCNDEGALGRDTSLEGSE--------MVPGKVDLQEKVVQVSAGDSHTAAL 165
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 166 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 217
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIPS---LQDK------TITS 348
L +EG +Y+ G + G+LG V E + E +P L+ +
Sbjct: 218 LTAEGDLYSLGCGEQGQLG--RVPELFSNRGGRQGLERLLVPKCVMLKSRGSRGYVRFQD 275
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKE 381
+ CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 276 VFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVGFSGGQH 335
Query: 382 DDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ ++SEGK Y+ GR +YGRLGL +E + PT IP L ++S+ACG V +A+
Sbjct: 336 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTLIPRL--PAVSSVACGASVGYAVTK 393
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G + WGMG YQLG G+++D+ P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 394 DGRAFAWGMGTNYQLGTGQDEDVWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 449
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T L+ L V V G +T+DG+ +
Sbjct: 339 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSTPTLIPRLPAVSSVACGASVGYAVTKDGRAF 398
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E + V + K ++ +S+G H+V L++D
Sbjct: 399 AWGMGTNYQLG---TGQDEDVWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 448
>gi|410966597|ref|XP_003989817.1| PREDICTED: regulator of chromosome condensation isoform 1 [Felis
catus]
Length = 421
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLTMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 384
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 199/436 (45%), Gaps = 81/436 (18%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDALPKSKKVKVSH-RSHST---EPGMVLTLG--QGDVGQLGL-GENVMERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L+ K + + ++ G + +G S +G P + KS+
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMV 164
Query: 290 --DKKFTM----LASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVT 333
+ TM +ASG H + L ++G +Y G + G+LG + E +
Sbjct: 165 PVQVQLTMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 224
Query: 334 EPTPIP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------- 378
P + S CG +FAI EG +YG+G+ N +QLG
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQ 284
Query: 379 -----------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL 344
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
++S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL
Sbjct: 345 --PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVL 402
Query: 481 QVASGGQHSVILAKPK 496
V+SGGQH+V+L K K
Sbjct: 403 SVSSGGQHTVLLVKDK 418
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
Length = 443
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 247/394 (62%), Gaps = 27/394 (6%)
Query: 6 KKVLRKQAENPSQKVFVTSEAV--PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
KK +R ++E + KV + P+ T GVVL CG+GD GQLGLGPDVME+ A
Sbjct: 27 KKRVR-ESEGDTNKVVSKKHKIAHPSHPDVTVTGVVLACGEGDVGQLGLGPDVMEKSRPA 85
Query: 64 LVE-DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKK 121
LV D +V V GGMHTVCLT G+VYT+GCNDEGALGR +E SE +P V+L +
Sbjct: 86 LVNIDDQKIVSAVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDLLGR 145
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
+Q+SAGDSH+ L ++G V+AWG+FRD++G +GL +GIQ+ P+++ ++KIASG
Sbjct: 146 GIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEMLPGETVIKIASGG 205
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF-LEPGEVPL------KRKH 234
DH + LT +G + + GC EQGQLGR+ + + R R+G+ + L+P + KR
Sbjct: 206 DHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVV 265
Query: 235 IDDVFTGVYNTFISSK--GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS-DK 291
DDV+ G Y ++ K GSI A+GLNNY QLG D E + F P +K++S D
Sbjct: 266 FDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENK-------FVPVYVKAMSEDV 318
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-KTITSIA 350
K TM+ +GQHH++ L++ GK+Y GR +YGRLG + + E +P++ D +A
Sbjct: 319 KVTMVDAGQHHAICLDTAGKVYTVGRGEYGRLGHGDSN----EEKRVPAILDLPPCKQVA 374
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
G VS+A+ + G +Y WGMG QLG+G ++D+
Sbjct: 375 AGQAVSYAVTNSGEIYAWGMGTSQQLGSGDDEDV 408
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 202/442 (45%), Gaps = 75/442 (16%)
Query: 103 REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
RE+EGD+ + V+ K S D + G V A G G +GL + ++
Sbjct: 31 RESEGDTN---KVVSKKHKIAHPSHPD-----VTVTGVVLACG--EGDVGQLGLGPDVME 80
Query: 163 KTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
K+ L ++ IV +G H V LT++G + T GC ++G LGR T S
Sbjct: 81 KSRPALVNIDDQKIVSAVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETL---- 136
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
P +V L + I + ++ +G + A+G N+ +A+ ++ + +
Sbjct: 137 ----PSKVDLLGRGIQLSAGDSHTAVLTDEGKVFAWG--NFR---DANGKIGLTSDGIQE 187
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSE 330
P I+ L + +ASG H L L +G+IY+ G + G+LG + +
Sbjct: 188 KP--IEMLPGETVIKIASGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLD 245
Query: 331 PVTEPTPIPSLQDKT-----ITSIACGNCVSFAIDSE-GVLYGWGMGNGYQLGN------ 378
+ +P I L+ K+ + G +S+A + + G +Y WG+ N YQLG
Sbjct: 246 YILKPAIIRCLRHKSKKRVVFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENK 305
Query: 379 -------GKEDDI--------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
+D+ L++ GK+Y GR +YGRLG + +E +
Sbjct: 306 FVPVYVKAMSEDVKVTMVDAGQHHAICLDTAGKVYTVGRGEYGRLGHGDSNEE----KRV 361
Query: 418 PSLQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
P++ D +A G VS+A+ + G +Y WGMG QLG+G ++D+ P I GKQL
Sbjct: 362 PAILDLPPCKQVAAGQAVSYAVTNSGEIYAWGMGTSQQLGSGDDEDVTTPQLITGKQLQT 421
Query: 477 YTVLQVASGGQHSVILAKPKPN 498
V+ V+ GGQH+V+LA P+
Sbjct: 422 RKVIAVSGGGQHTVLLATDTPS 443
>gi|327199318|ref|NP_001192137.1| regulator of chromosome condensation [Callithrix jacchus]
Length = 421
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDVTVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 203/434 (46%), Gaps = 77/434 (17%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKNKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIP 339
D +ASG H + L ++G +Y G + G+LG V E E +P
Sbjct: 169 QLDVTVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVP 226
Query: 340 S---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
L+ + CG +FAI EG +YG+G+ N +QLG
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTESCFIPQNL 286
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 287 TSFKNSTKSWVRFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 344
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V
Sbjct: 345 PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSV 404
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 405 SSGGQHTVLLVKDK 418
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|355720994|gb|AES07118.1| SNHG3-RCC1 readthrough transcript [Mustela putorius furo]
Length = 423
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 237/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 38 GMVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 97
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 98 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 157
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P+ ++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 158 LL-EPMKKSMVPVHVQLTEPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 216
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 217 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLG 276
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 277 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 329
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 330 GLGEGAEEKSIPTLISXL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 387
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 15 PPEDALPKSKKVKVSH-RSHST---EPGMVLTLG--QGDVGQLGL-GENVMERKKPALVP 67
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 68 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 119
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 120 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVPVHVQL 173
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
+ +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 174 --TEPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 231
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 232 VMLKSRGSRGHVRFQDAFCGAYFTFAISCEGHVYGFGLSNYHQLGTPGTESCFVPQNLTS 291
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 292 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISXL--PA 349
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL V+S
Sbjct: 350 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLSVSS 409
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 410 GGQHTVLLVKDK 421
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 311 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISXLPAVSSVACGASVGYAVTKDGRVF 370
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 371 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 420
>gi|395521930|ref|XP_003765067.1| PREDICTED: regulator of chromosome condensation [Sarcophilus
harrisii]
Length = 421
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 175/365 (47%), Positives = 239/365 (65%), Gaps = 23/365 (6%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+T G+VLT GQGD GQLGLG V+ERK ALV +++V+ GGMHTVCL + G+VYT
Sbjct: 31 RTEAGLVLTLGQGDVGQLGLGEHVIERKRPALVPMPESIVQAEAGGMHTVCLGKSGQVYT 90
Query: 93 WGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+GCNDEGALGR+ + SE +P VNL +K VQ+SAGDSH+ AL EDG V+ WGSFRD++
Sbjct: 91 FGCNDEGALGRDTSVEGSETVPGVVNLSEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNN 150
Query: 152 GSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL E ++K+ P++++ ++K+ASG DH VMLT GNL T+GC EQGQLGR+ +
Sbjct: 151 GVIGLL-EPMKKSMVPVQVQLDVPVIKVASGNDHLVMLTIDGNLYTSGCGEQGQLGRVPE 209
Query: 210 RSASRNARRGMS-FLEPGEVPLK-RKH-----IDDVFTGVYNTF-ISSKGSILAFGLNNY 261
A+R R+G+ L P V LK R H D F G Y TF +S +G + FGL+NY
Sbjct: 210 FFANRGGRKGLDRLLIPQCVLLKSRGHRGSVLFQDAFCGAYFTFAVSREGHVYGFGLSNY 269
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
QLG +E C F P + S S K + + GQHH++ L+SEGK+Y+ GR +
Sbjct: 270 HQLGTPSTE------PC-FAPQSLTSFKNSTKSWVGFSGGQHHTVCLDSEGKVYSLGRAE 322
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YGRLGL +E + PT IP L ++S+ACG V +A+ +G + WGMG +QLG G
Sbjct: 323 YGRLGLGVGAEEKSCPTLIPKL--PPVSSVACGASVGYAVTKDGRAFAWGMGTNFQLGTG 380
Query: 380 KEDDI 384
+++D+
Sbjct: 381 EDEDV 385
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG E+ L+ L V V G +T+DG+ +
Sbjct: 308 CLDSEGKVYSLGRAEYGRLGLGVGAEEKSCPTLIPKLPPVSSVACGASVGYAVTKDGRAF 367
Query: 92 TWGCNDEGALGREAEGD--SEFIPQTVNLPKKAV-QISAGDSHSVALLED 138
WG LG + D S + L + V +S+G H+V L+ +
Sbjct: 368 AWGMGTNFQLGTGEDEDVWSPVVMSGKQLENRVVLSVSSGGQHTVLLVRN 417
>gi|383415407|gb|AFH30917.1| regulator of chromosome condensation isoform b [Macaca mulatta]
Length = 438
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 111
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 112 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFAN 230
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 231 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 290
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 291 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 343
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 344 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 401
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 190/414 (45%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 43 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 99
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 100 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MIPGKVELQEKVVQVSAGDSHTAAL 151
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 152 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 203
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L + G +Y G + G+LG + E + P + S
Sbjct: 204 LTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 263
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 264 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 323
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 324 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 381
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 382 RVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 435
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 325 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 384
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 385 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 434
>gi|351695932|gb|EHA98850.1| Regulator of chromosome condensation [Heterocephalus glaber]
Length = 437
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 234/363 (64%), Gaps = 23/363 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T GVVLT GQGD GQLGLG +VMERK ALV + VV+ GGMHTVCL++ G++Y++
Sbjct: 48 TEAGVVLTLGQGDVGQLGLGENVMERKKPALVPIPEEVVQAEAGGMHTVCLSKSGQIYSF 107
Query: 94 GCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCNDEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G
Sbjct: 108 GCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNG 167
Query: 153 SMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL E ++K+ P+ +E +VK+ASG DH VMLT G+L T GC EQGQLGR+ +
Sbjct: 168 VIGLL-EPMKKSMVPVPVELDVPVVKVASGNDHLVMLTVDGDLYTLGCGEQGQLGRVPEL 226
Query: 211 SASRNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
A+R R+G+ L P V LK + D F G Y TF IS +G I FGL+NY
Sbjct: 227 FANRGGRKGLERLLVPKCVMLKSRGSRGYVRFQDAFCGAYFTFVISREGHIYGFGLSNYH 286
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
QLG +E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +Y
Sbjct: 287 QLGTPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEY 339
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+
Sbjct: 340 GRLGLGEGAEERSIPTLISRL--PCVSSVACGASVGYAVTKDGRVFSWGMGTNYQLGTGQ 397
Query: 381 EDD 383
+DD
Sbjct: 398 DDD 400
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 192/425 (45%), Gaps = 51/425 (12%)
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
TE G V T G D G LG P V +P++ VQ AG H+V L + G +Y++
Sbjct: 48 TEAGVVLTLGQGDVGQLGLGENVMERKKPALVPIPEEVVQAEAGGMHTVCLSKSGQIYSF 107
Query: 145 GSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--PE 200
G + G++G EG + P K+E +V++++G H LT G + G
Sbjct: 108 GC--NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDN 165
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
G +G + S + P V L + + ++ G + G
Sbjct: 166 NGVIGLLEPMKKS---------MVPVPVELDVPVVKVASGNDHLVMLTVDGDLYTLGCGE 216
Query: 261 YSQLGEADSEVQ----KSGNTCFFTPH--LIKSLSDK---KFTMLASGQHHSLALNSEGK 311
QLG + G P ++KS + +F G + + ++ EG
Sbjct: 217 QGQLGRVPELFANRGGRKGLERLLVPKCVMLKSRGSRGYVRFQDAFCGAYFTFVISREGH 276
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
IY FG +Y +LG P TE +P N SF +S G+ G
Sbjct: 277 IYGFGLSNYHQLGT-----PGTESCFVPQ------------NLTSFK-NSTKSWVGFSGG 318
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ + ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG
Sbjct: 319 QHHTV-------CMDSEGKAYSLGRAEYGRLGLGEGAEERSIPTLISRL--PCVSSVACG 369
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
V +A+ +G ++ WGMG YQLG G++DD P+++ GKQL N VL V+SGGQH+V+
Sbjct: 370 ASVGYAVTKDGRVFSWGMGTNYQLGTGQDDDAWSPVEMTGKQLENRVVLSVSSGGQHTVL 429
Query: 492 LAKPK 496
L K K
Sbjct: 430 LVKDK 434
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG ER L+ L V V G +T+DG+V+
Sbjct: 324 CMDSEGKAYSLGRAEYGRLGLGEGAEERSIPTLISRLPCVSSVACGASVGYAVTKDGRVF 383
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
+WG LG + D + P + L + V +S+G H+V L++D
Sbjct: 384 SWGMGTNYQLG-TGQDDDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 433
>gi|132171|sp|P23800.1|RCC1_MESAU RecName: Full=Regulator of chromosome condensation; AltName:
Full=Chromosome condensation protein 1
gi|506396|gb|AAA36964.1| RCC1 [Cricetus cricetus]
Length = 421
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 233/364 (64%), Gaps = 23/364 (6%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
KT G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL + G+VY+
Sbjct: 31 KTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVYS 90
Query: 93 WGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+GCNDEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNN 150
Query: 152 GSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ +
Sbjct: 151 GVIGLL-EPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPE 209
Query: 210 RSASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
A+R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY
Sbjct: 210 LFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNY 269
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
QLG G F P + S S K + + GQHH++ ++SEGK Y+ GR +
Sbjct: 270 HQLG-------TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAE 322
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Query: 380 KEDD 383
+++D
Sbjct: 381 QDED 384
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 202/434 (46%), Gaps = 77/434 (17%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHKTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIP 339
D +ASG H + L ++G +Y G + G+LG V E E +P
Sbjct: 169 QLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVP 226
Query: 340 S---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
L+ + CG ++FAI EG +YG+G+ N +QLG
Sbjct: 227 KCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNL 286
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ I ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 344
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V
Sbjct: 345 PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 405 SSGGQHTVLLVKDK 418
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|402853628|ref|XP_003891494.1| PREDICTED: regulator of chromosome condensation isoform 2 [Papio
anubis]
gi|402853630|ref|XP_003891495.1| PREDICTED: regulator of chromosome condensation isoform 3 [Papio
anubis]
Length = 421
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 200/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MIPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L + G +Y G + G+LG + E + P
Sbjct: 169 QLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 228
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|383415409|gb|AFH30918.1| regulator of chromosome condensation isoform c [Macaca mulatta]
gi|387540352|gb|AFJ70803.1| regulator of chromosome condensation isoform c [Macaca mulatta]
Length = 421
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 200/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MIPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L + G +Y G + G+LG + E + P
Sbjct: 169 QLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 228
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 417
>gi|327315353|ref|NP_001192142.1| regulator of chromosome condensation [Oryctolagus cuniculus]
Length = 421
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/361 (49%), Positives = 238/361 (65%), Gaps = 25/361 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV + VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVPIPEEVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGRE--AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
DEGALGR+ AEG SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +
Sbjct: 95 DEGALGRDTSAEG-SEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGMI 153
Query: 155 GLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A
Sbjct: 154 GLL-EPMKKSLVPVQVQLDVPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFA 212
Query: 213 SRNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
+R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QL
Sbjct: 213 NRGGRQGLERLLVPRCVLLKSRGSRGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQL 272
Query: 265 GEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
G +E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGR
Sbjct: 273 GTPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGR 325
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LGL +E + PT I L +TS+ACG V +A+ +G + WGMG YQLG G+++
Sbjct: 326 LGLGEGAEEKSIPTLISKL--PAVTSVACGASVGYAVTKDGRAFAWGMGTSYQLGTGQDE 383
Query: 383 D 383
D
Sbjct: 384 D 384
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 200/434 (46%), Gaps = 77/434 (17%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEEVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSAEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGMIGLLEP-MKKS-----LVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIP 339
D +ASG H + L ++G +Y G + G+LG V E E +P
Sbjct: 169 QLDVPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVP 226
Query: 340 ---------SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
S CG +FAI EG +YG+G+ N +QLG
Sbjct: 227 RCVLLKSRGSRGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTESCFVPQNL 286
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISKL-- 344
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
+TS+ACG V +A+ +G + WGMG YQLG G+++D P+++ GKQL N VL V
Sbjct: 345 PAVTSVACGASVGYAVTKDGRAFAWGMGTSYQLGTGQDEDAWSPVEMTGKQLENRVVLSV 404
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 405 SSGGQHTVLLVKDK 418
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+ +
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISKLPAVTSVACGASVGYAVTKDGRAF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTSYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|327199324|ref|NP_001192140.1| regulator of chromosome condensation [Equus caballus]
Length = 421
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +V+ERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVLERKKPALVAIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEG+ Y+ GR +YGRL
Sbjct: 274 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGRAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 384
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 194/435 (44%), Gaps = 79/435 (18%)
Query: 113 PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLES 170
P LPK + SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDALPKSKKAKVSHRSHST---EPGLVLTLG--QGDVGQLGL-GENVLERKKPALVAI 65
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V L
Sbjct: 66 PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVEL 117
Query: 231 KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ K + + ++ G + +G S +G P + KS+
Sbjct: 118 QEKVVQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMVP 165
Query: 291 KKFTM------LASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTE 334
+ + +ASG H + L ++G +Y G + G+LG + E +
Sbjct: 166 VQVQLSMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 335 PTPIP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN----------- 378
P + S CG +FAI EG +YG+G+ N +QLG
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFVPQN 285
Query: 379 ----------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G+ + ++SEG+ Y+ GR +YGRLGL +E + PT I L
Sbjct: 286 LTSFKNSTKSWVGFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSIPTLISRL- 344
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
++S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL
Sbjct: 345 -PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLS 403
Query: 482 VASGGQHSVILAKPK 496
V+SGGQH+V+L K K
Sbjct: 404 VSSGGQHTVLLVKDK 418
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGRAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|402853634|ref|XP_003891497.1| PREDICTED: regulator of chromosome condensation isoform 5 [Papio
anubis]
Length = 463
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 77 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 136
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 137 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 196
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 197 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFAN 255
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 256 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 315
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 316 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 368
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 369 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 426
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 190/414 (45%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 68 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 124
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 125 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MIPGKVELQEKVVQVSAGDSHTAAL 176
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 177 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 228
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L + G +Y G + G+LG + E + P + S
Sbjct: 229 LTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 288
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 289 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 348
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 349 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 406
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 407 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 460
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 350 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 409
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 410 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 459
>gi|402853626|ref|XP_003891493.1| PREDICTED: regulator of chromosome condensation isoform 1 [Papio
anubis]
Length = 475
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 89 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 148
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 149 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 208
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 209 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFAN 267
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 268 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 327
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 328 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 380
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 381 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 438
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 202/434 (46%), Gaps = 77/434 (17%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 66 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 118
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 119 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MIPGKVE 170
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 171 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 222
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIP 339
D +ASG H + L + G +Y G + G+LG V E E +P
Sbjct: 223 QLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVP 280
Query: 340 S---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
L+ + CG +FAI EG +YG+G+ N +QLG
Sbjct: 281 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNL 340
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 341 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 398
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V
Sbjct: 399 PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSV 458
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 459 SSGGQHTVLLVKDK 472
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 362 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 421
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 422 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 471
>gi|427783665|gb|JAA57284.1| Putative regulator of chromosome condensation 1 [Rhipicephalus
pulchellus]
Length = 441
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/365 (47%), Positives = 226/365 (61%), Gaps = 21/365 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T GQGD GQLGLGPDVME ALV+DL +VV+VV GGMHT+CLT DGKV+++GCN
Sbjct: 53 GNVYTVGQGDVGQLGLGPDVMECSRPALVQDLKDVVDVVAGGMHTLCLTADGKVWSFGCN 112
Query: 97 DEGALGREAEG--DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
DEGALGR+ SE P TV LP+ Q++AGDSHS AL G V+ WG+FRDS G M
Sbjct: 113 DEGALGRQTSSLDGSETTPGTVELPEPVAQVTAGDSHSAALTVSGKVFLWGNFRDSRGQM 172
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
GL EG + KL + S +V+IASG+DH MLT++G+LLT GC EQGQLGR+ R+A R
Sbjct: 173 GLITEGKAEPEPKLVA-SDVVQIASGSDHVAMLTAKGDLLTMGCGEQGQLGRLPARTAPR 231
Query: 215 NARRGM-SFLEPGE--VP----LKRKHIDDVFTGVYNTF--ISSKGSILAFGLNNYSQLG 265
A L+P + +P K + D V+ G Y TF + G + GLNNY Q+G
Sbjct: 232 RACAATHELLKPTKAYIPKPKGCKTRAFDGVWAGAYATFARLRETGRLYGCGLNNYHQMG 291
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+SG T P + S ++ +++ GQHH+L L+ EG +++ GR +YGRLGL
Sbjct: 292 GQAQSSSESG-TVISVPQPLTSCDGHRWKLVSGGQHHTLLLSEEGTVFSLGRKEYGRLGL 350
Query: 326 KNVSEPV-----TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
S P +P P+P L I+CG VS+AID EG L+ WG G QLG+G
Sbjct: 351 GE-STPAGNNDQDKPAPVPGLSG--CVDISCGEAVSYAIDGEGRLHSWGFGTNGQLGHGG 407
Query: 381 EDDIL 385
+DD+
Sbjct: 408 DDDLF 412
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 189/433 (43%), Gaps = 72/433 (16%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G VYT G D G LG + P V K V + AG H++ L DG V+++G
Sbjct: 53 GNVYTVGQGDVGQLGLGPDVMECSRPALVQDLKDVVDVVAGGMHTLCLTADGKVWSFGC- 111
Query: 148 RDSHGSMGLKG---EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--PEQG 202
+ G++G + +G + TP +E + ++ +G H LT G + G +G
Sbjct: 112 -NDEGALGRQTSSLDGSETTPGTVELPEPVAQVTAGDSHSAALTVSGKVFLWGNFRDSRG 170
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNY 261
Q+G IT+ A EP E L + + +G + +++KG +L G
Sbjct: 171 QMGLITEGKA-----------EP-EPKLVASDVVQIASGSDHVAMLTAKGDLLTMGCGEQ 218
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKS----------LSDKKFTMLASGQHHSLA-LNSEG 310
QLG + C T L+K + F + +G + + A L G
Sbjct: 219 GQLGRLPARTAPR-RACAATHELLKPTKAYIPKPKGCKTRAFDGVWAGAYATFARLRETG 277
Query: 311 KIYAFGRHDYGRLGLKNVSEP-----VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
++Y G ++Y ++G + S ++ P P+ S
Sbjct: 278 RLYGCGLNNYHQMGGQAQSSSESGTVISVPQPLTSCDG---------------------- 315
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV-----TEPTPIPSL 420
+ W + +G Q +L+ EG +++ GR +YGRLGL S P +P P+P L
Sbjct: 316 HRWKLVSGGQ----HHTLLLSEEGTVFSLGRKEYGRLGLGE-STPAGNNDQDKPAPVPGL 370
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
I+CG VS+AID EG L+ WG G QLG+G +DD+ EP + GK L
Sbjct: 371 SG--CVDISCGEAVSYAIDGEGRLHSWGFGTNGQLGHGGDDDLFEPKAVAGK-FAGKKAL 427
Query: 481 QVASGGQHSVILA 493
V+ GGQH+VILA
Sbjct: 428 VVSGGGQHAVILA 440
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 44/315 (13%)
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+S GN+ T G + GQLG M P V + +D V G++ +
Sbjct: 50 SSPGNVYTVGQGDVGQLGLGPDV---------MECSRPALVQDLKDVVDVVAGGMHTLCL 100
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
++ G + +FG N+ LG S + S T P ++ + + +G HS AL
Sbjct: 101 TADGKVWSFGCNDEGALGRQTSSLDGSETT----PGTVEL--PEPVAQVTAGDSHSAALT 154
Query: 308 SEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
GK++ +G R G++GL ++E EP P L + IA G+ + ++G L
Sbjct: 155 VSGKVFLWGNFRDSRGQMGL--ITEGKAEPEP--KLVASDVVQIASGSDHVAMLTAKGDL 210
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS-LQDKT 424
G G QLG ++ A + +P P P + +
Sbjct: 211 LTMGCGEQGQLG------------RLPARTAPRRACAATHELLKPTKAYIPKPKGCKTRA 258
Query: 425 ITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDD------ILEPMKIEGKQLNNY 477
+ G +FA + G LYG G+ N +Q+G + I P + + +
Sbjct: 259 FDGVWAGAYATFARLRETGRLYGCGLNNYHQMGGQAQSSSESGTVISVPQPLTSCDGHRW 318
Query: 478 TVLQVASGGQHSVIL 492
++ SGGQH +L
Sbjct: 319 ---KLVSGGQHHTLL 330
>gi|350585800|ref|XP_003482053.1| PREDICTED: regulator of chromosome condensation isoform 2 [Sus
scrofa]
Length = 421
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 237/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G L T G EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF ISS+G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEG+ Y+ GR +YGRL
Sbjct: 274 TPGTE------SC-FVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 327 GLGEGAEEKSVPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 384
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 202/438 (46%), Gaps = 85/438 (19%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDALPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L+ K + + ++ G + +G S +G P + KS+
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMV 164
Query: 290 DKKFTM------LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EP 335
+ + +ASG H + L ++G++Y G + G+LG V E E
Sbjct: 165 PVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLG--RVPELFANRGGRQGLER 222
Query: 336 TPIPS---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------- 378
+P L+ + CG +FAI SEG +YG+G+ N +QLG
Sbjct: 223 LLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFV 282
Query: 379 -------------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
G+ + ++SEG+ Y+ GR +YGRLGL +E + PT I
Sbjct: 283 PQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLIS 342
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N
Sbjct: 343 RL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRM 400
Query: 479 VLQVASGGQHSVILAKPK 496
VL V+SGGQH+V+L K K
Sbjct: 401 VLSVSSGGQHTVLLVKDK 418
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG E D+ E + + + + +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQEEDAWSPVEMTGKQLE-NRMVLSVSSGGQHTVLLVKD 417
>gi|402853632|ref|XP_003891496.1| PREDICTED: regulator of chromosome condensation isoform 4 [Papio
anubis]
Length = 477
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 91 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 150
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 151 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 210
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 211 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFAN 269
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 270 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 329
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 330 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 382
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 383 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 440
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 196/430 (45%), Gaps = 51/430 (11%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H TE G V T G D G LG P V++P+ VQ AG H+V L + G
Sbjct: 83 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 142
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
VY++G + G++G EG + P K+E +V++++G H LT G + G
Sbjct: 143 QVYSFGC--NDEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 200
Query: 198 C--PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G +G + S + P +V L + + +++ G +
Sbjct: 201 SFRDNNGVIGLLEPMKKS---------MVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYT 251
Query: 256 FGLNNYSQLGEADSEVQ----KSGNTCFFTPH--LIKSLSDK---KFTMLASGQHHSLAL 306
G QLG + G P ++KS + +F G + + A+
Sbjct: 252 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 311
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ EG +Y FG +Y +LG P TE IP N SF +S
Sbjct: 312 SHEGHVYGFGLSNYHQLGT-----PGTESCFIPQ------------NLTSFK-NSTKSWV 353
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
G+ G + + ++SEGK Y+ GR +YGRLGL +E + PT I L ++
Sbjct: 354 GFSGGQHHTV-------CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVS 404
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGG
Sbjct: 405 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGG 464
Query: 487 QHSVILAKPK 496
QH+V+L K K
Sbjct: 465 QHTVLLVKDK 474
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 364 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 423
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 424 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 473
>gi|335290816|ref|XP_003356291.1| PREDICTED: regulator of chromosome condensation isoform 1 [Sus
scrofa]
Length = 443
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/396 (45%), Positives = 251/396 (63%), Gaps = 33/396 (8%)
Query: 11 KQAENPSQKVF--VTSEAVPTLK-CK-------TGGGVVLTCGQGDTGQLGLGPDVMERK 60
K+ ++P + V S VP + C+ T G+VLT GQGD GQLGLG +VMERK
Sbjct: 21 KKVKDPCNQAVRAVASRRVPGARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERK 80
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLP 119
ALV +++V+ GGMHTVCL++ G+VY++GCNDEGALGR+ + SE +P V L
Sbjct: 81 KPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ 140
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKI 177
+K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +GL E ++K+ P++++ +VK+
Sbjct: 141 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLL-EPMKKSMVPVQVQLSMPVVKV 199
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK----R 232
ASG DH VMLT+ G L T G EQGQLGR+ + A+R R+G+ L P V LK R
Sbjct: 200 ASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 259
Query: 233 KHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL- 288
H+ D F G Y TF ISS+G + FGL+NY QLG +E +C F P + S
Sbjct: 260 GHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTE------SC-FVPQNLTSFK 312
Query: 289 -SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
S K + + GQHH++ ++SEG+ Y+ GR +YGRLGL +E + PT I L ++
Sbjct: 313 NSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRL--PAVS 370
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 371 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 406
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 72/416 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + IV+ +G H V L
Sbjct: 48 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVPIPEDIVQAEAGGMHTVCL 104
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 105 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 156
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ +ASG H +
Sbjct: 157 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLSMPVVKVASGNDHLVM 208
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIPS---LQDK------TITS 348
L ++G++Y G + G+LG V E E +P L+ +
Sbjct: 209 LTADGELYTLGSGEQGQLG--RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQD 266
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKE 381
CG +FAI SEG +YG+G+ N +QLG G+
Sbjct: 267 AFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQH 326
Query: 382 DDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ ++SEG+ Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+
Sbjct: 327 HTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRL--PAVSSVACGASVGYAVTK 384
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G ++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 385 DGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLLVKDK 440
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 330 CMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSVACGASVGYAVTKDGRVF 389
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG E D+ E + + + + +S+G H+V L++D
Sbjct: 390 AWGMGTNYQLGTGQEEDAWSPVEMTGKQLE-NRMVLSVSSGGQHTVLLVKD 439
>gi|426221844|ref|XP_004005116.1| PREDICTED: regulator of chromosome condensation isoform 4 [Ovis
aries]
Length = 444
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/396 (45%), Positives = 253/396 (63%), Gaps = 33/396 (8%)
Query: 11 KQAENPSQKVF--VTSEAVPTLK-CK-------TGGGVVLTCGQGDTGQLGLGPDVMERK 60
K+ ++P + V S VP + C+ T G+VLT GQGD GQLGLG +VMERK
Sbjct: 21 KKVKDPRNQAVRAVASRRVPGARSCQVSHRSHGTEPGMVLTLGQGDVGQLGLGENVMERK 80
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLP 119
ALV +++V+ GGMHTVCL++ G+VY++GCNDEGALGR+ + SE +P V+L
Sbjct: 81 KPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQ 140
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKI 177
+K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +GL E ++K+ P++++ ++K+
Sbjct: 141 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLL-EPMKKSMVPVQVQLSMPVMKV 199
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK----R 232
ASG DH VMLT G+L T G EQGQLGR+ + A+R R+G+ L P V LK R
Sbjct: 200 ASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 259
Query: 233 KHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL- 288
H+ D F G Y TF ISS+G + FGL+NY QLG +E +CF P + S
Sbjct: 260 GHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTE------SCFI-PQNLTSFK 312
Query: 289 -SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
S K + + GQHH++ ++SEGK Y+ GR +YGRLGL +E + PT I L T++
Sbjct: 313 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLISRL--PTVS 370
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 371 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 406
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 184/398 (46%), Gaps = 78/398 (19%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + IV+ +G H V L+ G + + GC ++G LGR T
Sbjct: 68 GQLGL-GENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTS 126
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
S + PG+V L+ K + + ++ G + +G S
Sbjct: 127 VEGSE--------MVPGKVDLQEKVVQVSAGDSHTAALTEDGRVFLWG-----------S 167
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQHHSLALNSEGKIYAFGRHDYGRL 323
+G P + KS+ + + +ASG H + L +G +Y G + G+L
Sbjct: 168 FRDNNGVIGLLEP-MKKSMVPVQVQLSMPVMKVASGNDHLVMLTVDGDLYTLGSGEQGQL 226
Query: 324 GLKNVSEPVT--------EPTPIPS---LQDK------TITSIACGNCVSFAIDSEGVLY 366
G V E E +P L+ + CG +FAI SEG +Y
Sbjct: 227 G--RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVY 284
Query: 367 GWGMGNGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHD 398
G+G+ N +QLG G+ + ++SEGK Y+ GR +
Sbjct: 285 GFGLSNYHQLGTQGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 344
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
YGRLGL +E + PT I L T++S+ACG V +A+ +G ++ WGMG YQLG G
Sbjct: 345 YGRLGLGEGAEEKSVPTLISRL--PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTG 402
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 403 QDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 440
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 330 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPTVSSVACGASVGYAVTKDGRVF 389
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 390 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 439
>gi|19527092|ref|NP_598639.1| regulator of chromosome condensation isoform 2 [Mus musculus]
gi|81879377|sp|Q8VE37.1|RCC1_MOUSE RecName: Full=Regulator of chromosome condensation; AltName:
Full=Chromosome condensation protein 1
gi|18044692|gb|AAH19807.1| Regulator of chromosome condensation 1 [Mus musculus]
gi|148698162|gb|EDL30109.1| regulator of chromosome condensation 1, isoform CRA_d [Mus
musculus]
Length = 421
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 384
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 73/430 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L ++G +Y G + G+LG L + P
Sbjct: 169 QLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRC 228
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ + A CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PV 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSS 406
Query: 485 GGQHSVILAK 494
GGQH+V+L K
Sbjct: 407 GGQHTVLLVK 416
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|74213820|dbj|BAE29345.1| unnamed protein product [Mus musculus]
Length = 421
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDMGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 384
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 73/430 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDMGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L ++G +Y G + G+LG L + P
Sbjct: 169 QLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRC 228
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ + A CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PV 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSS 406
Query: 485 GGQHSVILAK 494
GGQH+V+L K
Sbjct: 407 GGQHTVLLVK 416
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|431891177|gb|ELK02054.1| Regulator of chromosome condensation [Pteropus alecto]
Length = 471
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 237/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +V+ERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 85 GLVLTLGQGDVGQLGLGENVLERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 144
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L + VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 145 DEGALGRDTSVEGSEMVPGKVELQENVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 204
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 205 LL-EPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 263
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 264 RGGRQGLERLLVPKSVMLKSRGSRGHVRFQDAFCGAYFTFAISLEGHVYGFGLSNYHQLG 323
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +C F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 324 TPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 376
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+E+D
Sbjct: 377 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEED 434
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 195/430 (45%), Gaps = 51/430 (11%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H TE G V T G D G LG P V +P+ VQ AG H+V L + G
Sbjct: 77 HRSHSTEPGLVLTLGQGDVGQLGLGENVLERKKPALVPIPEDIVQAEAGGMHTVCLSKSG 136
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
VY++G + G++G EG + P K+E +V++++G H LT G + G
Sbjct: 137 QVYSFGC--NDEGALGRDTSVEGSEMVPGKVELQENVVQVSAGDSHTAALTEDGRVFLWG 194
Query: 198 C--PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G +G + S + P +V L + + +++ G +
Sbjct: 195 SFRDNNGVIGLLEPMKKS---------MVPVQVQLSMPVVKVASGNDHLVMLTADGDLYT 245
Query: 256 FGLNNYSQLGEADSEVQ----KSGNTCFFTPH--LIKSLSDK---KFTMLASGQHHSLAL 306
G QLG + G P ++KS + +F G + + A+
Sbjct: 246 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKSVMLKSRGSRGHVRFQDAFCGAYFTFAI 305
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ EG +Y FG +Y +LG P TE +P N SF +S
Sbjct: 306 SLEGHVYGFGLSNYHQLGT-----PGTESCFVPQ------------NLTSFK-NSTKSWV 347
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
G+ G + + ++SEGK Y+ GR +YGRLGL +E + PT I L ++
Sbjct: 348 GFSGGQHHTV-------CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVS 398
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
S+ACG V +A+ +G ++ WGMG YQLG G+E+D P+++ GKQL N VL V+SGG
Sbjct: 399 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRVVLSVSSGG 458
Query: 487 QHSVILAKPK 496
QH+V+L K K
Sbjct: 459 QHTVLLVKDK 468
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 358 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 417
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG E D+ + P + L + V +S+G H+V L++D
Sbjct: 418 AWGMGTNYQLGTGQEEDA-WSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 467
>gi|4502801|ref|NP_001260.1| regulator of chromosome condensation isoform c [Homo sapiens]
gi|114796642|ref|NP_001041664.1| regulator of chromosome condensation isoform c [Homo sapiens]
gi|132170|sp|P18754.1|RCC1_HUMAN RecName: Full=Regulator of chromosome condensation; AltName:
Full=Cell cycle regulatory protein; AltName:
Full=Chromosome condensation protein 1
gi|20379024|gb|AAM21072.1|AF498924_1 regulator of chromosome condensation 1 [Homo sapiens]
gi|35907|emb|CAA29496.1| unnamed protein product [Homo sapiens]
gi|35909|emb|CAA31182.1| unnamed protein product [Homo sapiens]
gi|303620|dbj|BAA00469.1| RCC1 protein [Homo sapiens]
gi|13938341|gb|AAH07300.1| SNHG3-RCC1 readthrough transcript [Homo sapiens]
gi|14603213|gb|AAH10067.1| Regulator of chromosome condensation 1 [Homo sapiens]
gi|22477350|gb|AAH36903.1| SNHG3-RCC1 readthrough transcript [Homo sapiens]
gi|47115323|emb|CAG28621.1| CHC1 [Homo sapiens]
gi|119628096|gb|EAX07691.1| regulator of chromosome condensation 1, isoform CRA_b [Homo
sapiens]
gi|119628098|gb|EAX07693.1| regulator of chromosome condensation 1, isoform CRA_b [Homo
sapiens]
gi|123992955|gb|ABM84079.1| regulator of chromosome condensation 1 [synthetic construct]
gi|124000501|gb|ABM87759.1| regulator of chromosome condensation 1 [synthetic construct]
gi|261858528|dbj|BAI45786.1| regulator of chromosome condensation 1 [synthetic construct]
Length = 421
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 169 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 228
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 417
>gi|327199310|ref|NP_001192134.1| regulator of chromosome condensation [Pan troglodytes]
gi|410222782|gb|JAA08610.1| regulator of chromosome condensation 1 [Pan troglodytes]
gi|410262344|gb|JAA19138.1| regulator of chromosome condensation 1 [Pan troglodytes]
gi|410300294|gb|JAA28747.1| regulator of chromosome condensation 1 [Pan troglodytes]
gi|410339315|gb|JAA38604.1| regulator of chromosome condensation 1 [Pan troglodytes]
Length = 421
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 169 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 228
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|148698161|gb|EDL30108.1| regulator of chromosome condensation 1, isoform CRA_c [Mus
musculus]
Length = 504
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 118 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 177
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 178 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 237
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 238 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 296
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 297 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 356
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 357 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 409
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 410 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 467
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 184/390 (47%), Gaps = 66/390 (16%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE + +K P + + +V+ +G H V L+ G + + GC ++G LGR T
Sbjct: 129 GQLGL-GESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTS 187
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S + PG+V L+ K + + ++ G + +G +N +G
Sbjct: 188 VEGSE--------MVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLL 239
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--- 324
+ ++KS P ++ D +ASG H + L ++G +Y G + G+LG
Sbjct: 240 EP-MKKS-----MVP--VQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVP 291
Query: 325 -----------LKNVSEPVTEPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGN 372
L + P + + A CG +FAI EG +YG+G+ N
Sbjct: 292 ELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSN 351
Query: 373 GYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLGL 404
+QLG G+ + ++SEGK Y+ GR +YGRLGL
Sbjct: 352 YHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGL 411
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 412 GEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAW 469
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P+++ GKQL N VL V+SGGQH+V+L K
Sbjct: 470 SPVEMTGKQLENRVVLTVSSGGQHTVLLVK 499
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 391 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 450
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 451 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 500
>gi|114796646|ref|NP_001041660.1| regulator of chromosome condensation isoform b [Homo sapiens]
Length = 438
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 111
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 112 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 230
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 231 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 290
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 291 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 343
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 344 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 401
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 43 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 99
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 100 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 151
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 152 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 203
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 204 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 263
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 264 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 323
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 324 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 381
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 382 RVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 435
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 325 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 384
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 385 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 434
>gi|410222784|gb|JAA08611.1| regulator of chromosome condensation 1 [Pan troglodytes]
gi|410262348|gb|JAA19140.1| regulator of chromosome condensation 1 [Pan troglodytes]
gi|410300296|gb|JAA28748.1| regulator of chromosome condensation 1 [Pan troglodytes]
gi|410339317|gb|JAA38605.1| regulator of chromosome condensation 1 [Pan troglodytes]
Length = 438
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 111
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 112 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 230
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 231 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 290
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 291 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 343
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 344 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 401
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 43 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 99
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 100 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 151
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 152 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 203
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 204 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 263
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 264 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 323
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 324 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 381
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 382 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 435
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 325 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 384
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 385 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 434
>gi|332245213|ref|XP_003271757.1| PREDICTED: regulator of chromosome condensation isoform 3 [Nomascus
leucogenys]
Length = 438
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 237/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 52 GLVLTLGQGDVGQLGLGEKVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 111
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 112 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 230
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 231 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 290
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 291 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 343
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL ++ + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 344 GLGEGAQEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 401
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 193/416 (46%), Gaps = 72/416 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 43 SHRSHSTEPGLVLTLG--QGDVGQLGL-GEKVMERKKPALVSIPEDVVQAEAGGMHTVCL 99
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 100 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 151
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 152 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 203
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIPS---LQDK------TITS 348
L ++G +Y G + G+LG V E E +P L+ +
Sbjct: 204 LTADGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQD 261
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKE 381
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 262 AFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 321
Query: 382 DDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ ++SEGK Y+ GR +YGRLGL ++ + PT I L ++S+ACG V +A+
Sbjct: 322 HTVCMDSEGKAYSLGRAEYGRLGLGEGAQEKSIPTLISRL--PAVSSVACGASVGYAVTK 379
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 380 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 435
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 325 CMDSEGKAYSLGRAEYGRLGLGEGAQEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 384
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 385 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 434
>gi|4389390|pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human
gi|4389391|pdb|1A12|B Chain B, Regulator Of Chromosome Condensation (Rcc1) Of Human
gi|4389392|pdb|1A12|C Chain C, Regulator Of Chromosome Condensation (Rcc1) Of Human
Length = 413
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 27 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 86
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 87 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 146
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 147 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 205
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 206 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 265
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 266 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 318
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 319 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 376
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 4 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 56
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 57 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 108
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 109 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 160
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 161 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 220
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 221 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 280
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 281 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 338
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 339 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSS 398
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 399 GGQHTVLLVKDK 410
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 300 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 359
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 360 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 409
>gi|308153287|ref|NP_001184011.1| regulator of chromosome condensation isoform 1 [Mus musculus]
gi|34784343|gb|AAH57645.1| Rcc1 protein [Mus musculus]
Length = 434
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 48 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 107
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 108 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 167
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 168 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 226
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 227 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 286
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 287 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 339
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 340 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 397
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 191/412 (46%), Gaps = 68/412 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + + +V+ +G H V L
Sbjct: 39 SHRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVPLLQDVVQAEAGGMHTVCL 95
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 96 SQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 147
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 148 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDAPVVKVASGNDHLVM 199
Query: 306 LNSEGKIYAFGRHDYGRLG--------------LKNVSEPVTEPTPIPSLQDKTITSIA- 350
L ++G +Y G + G+LG L + P + + A
Sbjct: 200 LTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAF 259
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 260 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHT 319
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 320 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDG 377
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K
Sbjct: 378 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 429
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 321 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 380
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 381 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 430
>gi|348571060|ref|XP_003471314.1| PREDICTED: regulator of chromosome condensation-like [Cavia
porcellus]
Length = 421
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 233/363 (64%), Gaps = 23/363 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G+VLT GQGD GQLGLG VMERK ALV + VV+ GGMHTVCL++ G++Y++
Sbjct: 32 TASGMVLTLGQGDVGQLGLGESVMERKKPALVPIPEEVVQAEAGGMHTVCLSKSGQIYSF 91
Query: 94 GCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCNDEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 153 SMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL E ++K+ P+++E +VK+ASG DH VMLT G+L T GC EQGQLGR+ +
Sbjct: 152 VIGLL-EPMKKSMVPVQVELDVPVVKVASGNDHLVMLTVDGDLYTLGCGEQGQLGRVPEL 210
Query: 211 SASRNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
A+R R+G+ L P V LK + D F G Y TF IS +G + FGL+NY
Sbjct: 211 FANRGGRKGLERLLVPKCVMLKSRGSRGYVRFQDAFCGAYFTFAISHEGHVYGFGLSNYH 270
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
QLG +E +C F P + S S K + + GQHH++ ++SEG Y+ GR +Y
Sbjct: 271 QLGTPGTE------SC-FVPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGNAYSLGRAEY 323
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+
Sbjct: 324 GRLGLGEGAEEKSIPTLISRL--PCVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ 381
Query: 381 EDD 383
+DD
Sbjct: 382 DDD 384
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 201/434 (46%), Gaps = 77/434 (17%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS A G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAVPKSKKVKVSH-RSHSTA---SGMVLTLG--QGDVGQLGL-GESVMERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEEVVQAEAGGMHTVCLSKSGQIYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIP 339
D +ASG H + L +G +Y G + G+LG V E E +P
Sbjct: 169 ELDVPVVKVASGNDHLVMLTVDGDLYTLGCGEQGQLG--RVPELFANRGGRKGLERLLVP 226
Query: 340 S---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
L+ + CG +FAI EG +YG+G+ N +QLG
Sbjct: 227 KCVMLKSRGSRGYVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFVPQNL 286
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ I ++SEG Y+ GR +YGRLGL +E + PT I L
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTICMDSEGNAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 344
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
++S+ACG V +A+ +G ++ WGMG YQLG G++DD P+++ GKQL N VL V
Sbjct: 345 PCVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDDDAWSPVEMTGKQLENRVVLSV 404
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 405 SSGGQHTVLLVKDK 418
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGNAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPCVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAV-QISAGDSHSVALLED 138
WG LG + D + P + L + V +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG-TGQDDDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|148698159|gb|EDL30106.1| regulator of chromosome condensation 1, isoform CRA_a [Mus
musculus]
Length = 429
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 43 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 102
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 103 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 162
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 163 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 221
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 222 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 281
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 282 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 334
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 335 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 392
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 73/430 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 20 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 72
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 73 LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 124
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 125 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 176
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L ++G +Y G + G+LG L + P
Sbjct: 177 QLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRC 236
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ + A CG +FAI EG +YG+G+ N +QLG
Sbjct: 237 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 296
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 297 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PV 354
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 355 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSS 414
Query: 485 GGQHSVILAK 494
GGQH+V+L K
Sbjct: 415 GGQHTVLLVK 424
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 316 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 375
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 376 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 425
>gi|119628099|gb|EAX07694.1| regulator of chromosome condensation 1, isoform CRA_d [Homo
sapiens]
Length = 492
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 106 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 165
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 166 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 225
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 226 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 284
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 285 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 344
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 345 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 397
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 398 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 455
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 97 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 153
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 154 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 205
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 206 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 257
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 258 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 317
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 318 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 377
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 378 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 435
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 436 RVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 489
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 379 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 438
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 439 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 488
>gi|347970522|ref|XP_003436591.1| AGAP003742-PB [Anopheles gambiae str. PEST]
gi|333466710|gb|EGK96345.1| AGAP003742-PB [Anopheles gambiae str. PEST]
Length = 463
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 223/345 (64%), Gaps = 16/345 (4%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AE 106
GQLG+G DVME+ A++E L +VV++ GGMH +CLT G VY++GCNDEGALGR+ +E
Sbjct: 2 GQLGMGEDVMEKTRPAVIEGLSDVVQISAGGMHNLCLTRHGTVYSFGCNDEGALGRDTSE 61
Query: 107 GDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL 166
SEF P+ ++LP + V+ISAGDSHS LL+DG VYAWGSFRDSHG+MGL EG ++ P+
Sbjct: 62 EGSEFEPKQIDLPGQCVKISAGDSHSACLLDDGRVYAWGSFRDSHGNMGLTLEGNKRLPI 121
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEP 225
++ + V IASG DH V+L+ G++ T GC EQGQLGR++ R+AS +RRG + L+P
Sbjct: 122 EVLPGNRWVDIASGCDHLVLLSDIGHIYTVGCAEQGQLGRVSIRAASGESRRGKTQLLQP 181
Query: 226 GEVPLKRKHI--DDVFTGVYNTFIS--SKGSILAFGLNNYSQLG--EADSEVQKSGNTCF 279
G V + K I + ++ Y TF G I AFGLNNY QLG V K
Sbjct: 182 GIVTRRGKMIVAEAIWATTYCTFYKDYQTGRIFAFGLNNYCQLGIPNPSENVVKP----V 237
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPI 338
F P + S + +A GQHH+L L ++ K+YA GR +YGRLGL +V+E P+
Sbjct: 238 FVP---EPTSFDEVVQIAGGQHHTLVLKTDHKVYAIGRKEYGRLGLGDDVTEDAKTLQPV 294
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+L DK + S+ CG SFA+ +G LY WGMG+ QLG G E D
Sbjct: 295 AALGDKKVVSVCCGESTSFAVTDKGELYAWGMGSSLQLGTGLETD 339
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 39 VLTCGQGDTGQLGLGPDVME-RKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGC 95
V G+ + G+LGLG DV E KT V L + VV V G + +T+ G++Y WG
Sbjct: 267 VYAIGRKEYGRLGLGDDVTEDAKTLQPVAALGDKKVVSVCCGESTSFAVTDKGELYAWGM 326
Query: 96 NDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVALLED 138
LG E D I K ++ S+G HS+ L+++
Sbjct: 327 GSSLQLGTGLETDEAKPVLIASKQVAGKVILKASSGGQHSLFLVQE 372
>gi|14278207|pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex
gi|14278209|pdb|1I2M|D Chain D, Ran-Rcc1-So4 Complex
Length = 402
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 16 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 75
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 76 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 135
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 136 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 194
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 195 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 254
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 255 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 307
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 308 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 365
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 7 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 63
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 64 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 115
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 116 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 167
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 168 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 227
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 228 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 287
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 288 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 345
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 346 RVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 399
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 289 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 348
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 349 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 398
>gi|119628097|gb|EAX07692.1| regulator of chromosome condensation 1, isoform CRA_c [Homo
sapiens]
Length = 524
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 138 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 197
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 198 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 257
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 258 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 316
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 317 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 376
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 377 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 429
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 430 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 487
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 193/416 (46%), Gaps = 72/416 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 129 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 185
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 186 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 237
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 238 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 289
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIPS---LQDK------TITS 348
L ++G +Y G + G+LG V E E +P L+ +
Sbjct: 290 LTADGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQD 347
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKE 381
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 348 AFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 407
Query: 382 DDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+
Sbjct: 408 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTK 465
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 466 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 521
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 411 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 470
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 471 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 520
>gi|397515824|ref|XP_003828143.1| PREDICTED: regulator of chromosome condensation isoform 3 [Pan
paniscus]
Length = 463
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 77 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 136
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 137 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 196
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 197 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 255
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 256 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 315
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 316 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 368
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 369 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 426
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 68 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 124
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 125 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 176
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 177 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 228
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 229 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 288
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 289 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 348
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 349 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 406
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 407 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 460
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 350 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 409
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 410 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 459
>gi|410262346|gb|JAA19139.1| regulator of chromosome condensation 1 [Pan troglodytes]
Length = 452
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 66 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 125
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 126 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 185
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 186 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 244
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 245 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 304
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 305 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 357
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 358 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 415
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 57 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 113
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 114 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 165
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 166 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 217
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 218 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 277
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 278 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 337
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 338 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 395
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 396 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 449
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 339 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 398
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 399 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 448
>gi|114796644|ref|NP_001041659.1| regulator of chromosome condensation isoform a [Homo sapiens]
gi|46623048|gb|AAH69198.1| Regulator of chromosome condensation 1 [Homo sapiens]
Length = 452
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 66 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 125
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 126 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 185
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 186 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 244
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 245 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 304
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 305 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 357
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 358 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 415
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 57 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 113
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 114 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 165
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 166 TDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 217
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L ++G +Y G + G+LG + E + P + S
Sbjct: 218 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 277
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 278 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 337
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 338 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 395
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 396 RVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 449
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 339 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 398
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 399 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 448
>gi|426221838|ref|XP_004005113.1| PREDICTED: regulator of chromosome condensation isoform 1 [Ovis
aries]
gi|426221840|ref|XP_004005114.1| PREDICTED: regulator of chromosome condensation isoform 2 [Ovis
aries]
Length = 422
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 239/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GMVLTLGQGDVGQLGLGENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V+L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVDLQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ ++K+ASG DH VMLT G+L T G EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLSMPVMKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF ISS+G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TQGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L T++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSVPTLISRL--PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 197/436 (45%), Gaps = 81/436 (18%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P LPK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDALPKSKKVKVS----HRSHGTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVD 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L+ K + + ++ G + +G S +G P + KS+
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMV 164
Query: 290 DKKFTM------LASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVT 333
+ + +ASG H + L +G +Y G + G+LG + E +
Sbjct: 165 PVQVQLSMPVMKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLL 224
Query: 334 EPTPIP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------- 378
P + S CG +FAI SEG +YG+G+ N +QLG
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFIPQ 284
Query: 379 -----------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLISRL 344
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
T++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL
Sbjct: 345 --PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVL 402
Query: 481 QVASGGQHSVILAKPK 496
V+SGGQH+V+L K K
Sbjct: 403 TVSSGGQHTVLLVKDK 418
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPTVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|148698160|gb|EDL30107.1| regulator of chromosome condensation 1, isoform CRA_b [Mus
musculus]
Length = 457
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 71 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 130
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 131 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 190
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 191 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 249
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 250 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 309
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 310 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 362
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 363 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 420
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 191/412 (46%), Gaps = 68/412 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + + +V+ +G H V L
Sbjct: 62 SHRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVPLLQDVVQAEAGGMHTVCL 118
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 119 SQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 170
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 171 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDAPVVKVASGNDHLVM 222
Query: 306 LNSEGKIYAFGRHDYGRLG--------------LKNVSEPVTEPTPIPSLQDKTITSIA- 350
L ++G +Y G + G+LG L + P + + A
Sbjct: 223 LTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAF 282
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 283 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHT 342
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 343 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDG 400
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K
Sbjct: 401 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 452
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 344 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 403
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 404 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 453
>gi|410905257|ref|XP_003966108.1| PREDICTED: regulator of chromosome condensation-like [Takifugu
rubripes]
Length = 417
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 174/354 (49%), Positives = 226/354 (63%), Gaps = 16/354 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL GQGD GQLG G DV++RK +LV + V+VV GGMHTVCL+E G VYT+GCN
Sbjct: 36 GQVLVLGQGDVGQLGHGEDVLQRKKPSLVSLPEKTVQVVAGGMHTVCLSESGHVYTFGCN 95
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGRE E SE +P V L +K VQ+SAGDSH+ AL +DGTV+ WG+FRD++G +G
Sbjct: 96 DEGALGRETTEEGSEMVPGKVLLDEKVVQVSAGDSHTAALTDDGTVFIWGAFRDNNGVIG 155
Query: 156 L-KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
L + K P+KL + +VKIASG DH VM+T G+L T G EQGQLGR+ + ++R
Sbjct: 156 LVEPLKTSKVPVKLPMIEPVVKIASGNDHIVMVTLEGHLYTVGTGEQGQLGRVAEVFSNR 215
Query: 215 NARRGMS-FLEPGEVPLKRK-HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEV 271
R+G+ L P V +K K D F G Y TF SK G + FGL+NY QLG
Sbjct: 216 GGRQGLDRLLIPQIVIVKGKVQFIDAFCGSYVTFAVSKDGHVYGFGLSNYHQLG------ 269
Query: 272 QKSGNTCFFTPHL--IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
K+ TCFF L K+ S + + GQHH++ L++EG++Y+ GR +YGRLGL
Sbjct: 270 TKNTKTCFFPVKLACFKN-STTSWVEFSGGQHHTVCLDAEGQVYSLGRAEYGRLGLGQDV 328
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
E TEPT + ++ ++ CG VSFA+ EG +Y WGMG QLG G+EDD
Sbjct: 329 EEKTEPTLVSGIE--AACNVTCGASVSFAVTREGSVYAWGMGTNLQLGTGEEDD 380
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 170/364 (46%), Gaps = 62/364 (17%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V++ +G H V L+ G++ T GC ++G LGR T S + PG+V L K
Sbjct: 71 VQVVAGGMHTVCLSESGHVYTFGCNDEGALGRETTEEGSE--------MVPGKVLLDEKV 122
Query: 235 IDDVFTGVYNTFISSKGSILAFGL--NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ + ++ G++ +G +N +G E K+ P + +
Sbjct: 123 VQVSAGDSHTAALTDDGTVFIWGAFRDNNGVIGLV--EPLKTSKVPVKLPMI------EP 174
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA-- 350
+ASG H + + EG +Y G + G+LG V+E + L I I
Sbjct: 175 VVKIASGNDHIVMVTLEGHLYTVGTGEQGQLG--RVAEVFSNRGGRQGLDRLLIPQIVIV 232
Query: 351 ----------CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------- 378
CG+ V+FA+ +G +YG+G+ N +QLG
Sbjct: 233 KGKVQFIDAFCGSYVTFAVSKDGHVYGFGLSNYHQLGTKNTKTCFFPVKLACFKNSTTSW 292
Query: 379 -----GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
G+ + L++EG++Y+ GR +YGRLGL E TEPT + ++ ++ CG
Sbjct: 293 VEFSGGQHHTVCLDAEGQVYSLGRAEYGRLGLGQDVEEKTEPTLVSGIE--AACNVTCGA 350
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
VSFA+ EG +Y WGMG QLG G+EDD P+K+ GKQL N VL +SGGQH+ +L
Sbjct: 351 SVSFAVTREGSVYAWGMGTNLQLGTGEEDDEFSPVKMTGKQLENRAVLMASSGGQHTALL 410
Query: 493 AKPK 496
K K
Sbjct: 411 VKDK 414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 45/307 (14%)
Query: 191 GNLLTAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
G +L G + GQLG + QR +P V L K + V G++ +
Sbjct: 36 GQVLVLGQGDVGQLGHGEDVLQRK------------KPSLVSLPEKTVQVVAGGMHTVCL 83
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G + FG N+ LG +E P K L D+K +++G H+ AL
Sbjct: 84 SESGHVYTFGCNDEGALGRETTEEGSE-----MVPG--KVLLDEKVVQVSAGDSHTAALT 136
Query: 308 SEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+G ++ +G R + G +GL + P +P ++ + IA GN + EG L
Sbjct: 137 DDGTVFIWGAFRDNNGVIGLVEPLKTSKVPVKLPMIE--PVVKIASGNDHIVMVTLEGHL 194
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT- 424
Y G G QLG E + ++ G GR GL + P I ++ K
Sbjct: 195 YTVGTGEQGQLGRVAE--VFSNRG----------GRQGLDRLLIP-----QIVIVKGKVQ 237
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
CG+ V+FA+ +G +YG+G+ N +QLG P+K+ + N+ T S
Sbjct: 238 FIDAFCGSYVTFAVSKDGHVYGFGLSNYHQLGTKNTKTCFFPVKLACFK-NSTTSWVEFS 296
Query: 485 GGQHSVI 491
GGQH +
Sbjct: 297 GGQHHTV 303
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG DV E+ LV ++ V G + +T +G VY
Sbjct: 304 CLDAEGQVYSLGRAEYGRLGLGQDVEEKTEPTLVSGIEAACNVTCGASVSFAVTREGSVY 363
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAVQI-SAGDSHSVALLED 138
WG LG E D EF P + L +AV + S+G H+ L++D
Sbjct: 364 AWGMGTNLQLGT-GEEDDEFSPVKMTGKQLENRAVLMASSGGQHTALLVKD 413
>gi|426221842|ref|XP_004005115.1| PREDICTED: regulator of chromosome condensation isoform 3 [Ovis
aries]
Length = 458
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 239/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 71 GMVLTLGQGDVGQLGLGENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 130
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V+L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 131 DEGALGRDTSVEGSEMVPGKVDLQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 190
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ ++K+ASG DH VMLT G+L T G EQGQLGR+ + A+
Sbjct: 191 LL-EPMKKSMVPVQVQLSMPVMKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFAN 249
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF ISS+G + FGL+NY QLG
Sbjct: 250 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLG 309
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 310 TQGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 362
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L T++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 363 GLGEGAEEKSVPTLISRL--PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 420
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 189/418 (45%), Gaps = 76/418 (18%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + IV+ +G H V L
Sbjct: 62 SHRSHGTEPGMVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDIVQAEAGGMHTVCL 118
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 119 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVDLQEKVVQVSAGDSHTAAL 170
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQH 301
+ G + +G S +G P + KS+ + + +ASG
Sbjct: 171 TEDGRVFLWG-----------SFRDNNGVIGLLEP-MKKSMVPVQVQLSMPVMKVASGND 218
Query: 302 HSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTI 346
H + L +G +Y G + G+LG + E + P + S
Sbjct: 219 HLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF 278
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------G 379
CG +FAI SEG +YG+G+ N +QLG G
Sbjct: 279 QDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFIPQNLTSFKNSTKSWVGFSGG 338
Query: 380 KEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ + ++SEGK Y+ GR +YGRLGL +E + PT I L T++S+ACG V +A+
Sbjct: 339 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLISRL--PTVSSVACGASVGYAV 396
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 397 TKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 454
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 344 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPTVSSVACGASVGYAVTKDGRVF 403
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 404 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 453
>gi|397515822|ref|XP_003828142.1| PREDICTED: regulator of chromosome condensation isoform 2 [Pan
paniscus]
Length = 477
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 91 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 150
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 151 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 210
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 211 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 269
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 270 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 329
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 330 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 382
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 383 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 440
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 196/430 (45%), Gaps = 51/430 (11%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H TE G V T G D G LG P V++P+ VQ AG H+V L + G
Sbjct: 83 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 142
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
VY++G + G++G EG + P K+E +V++++G H LT G + G
Sbjct: 143 QVYSFGC--NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 200
Query: 198 C--PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G +G + S + P +V L + + +++ G +
Sbjct: 201 SFRDNNGVIGLLEPMKKS---------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYT 251
Query: 256 FGLNNYSQLGEADSEVQ----KSGNTCFFTPH--LIKSLSDK---KFTMLASGQHHSLAL 306
G QLG + G P ++KS + +F G + + A+
Sbjct: 252 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 311
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ EG +Y FG +Y +LG P TE IP N SF +S
Sbjct: 312 SHEGHVYGFGLSNYHQLGT-----PGTESCFIPQ------------NLTSFK-NSTKSWV 353
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
G+ G + + ++SEGK Y+ GR +YGRLGL +E + PT I L ++
Sbjct: 354 GFSGGQHHTV-------CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVS 404
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGG
Sbjct: 405 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGG 464
Query: 487 QHSVILAKPK 496
QH+V+L K K
Sbjct: 465 QHTVLLVKDK 474
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 364 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 423
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 424 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 473
>gi|119628100|gb|EAX07695.1| regulator of chromosome condensation 1, isoform CRA_e [Homo
sapiens]
Length = 475
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 89 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 148
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 149 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 208
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 209 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 267
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 268 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 327
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 328 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 380
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 381 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 438
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 66 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 118
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 119 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 170
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 171 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 222
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 223 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 282
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 283 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 342
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 343 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 400
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 401 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSS 460
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 461 GGQHTVLLVKDK 472
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 362 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 421
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 422 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 471
>gi|260831025|ref|XP_002610460.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]
gi|229295826|gb|EEN66470.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]
Length = 652
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/367 (45%), Positives = 232/367 (63%), Gaps = 23/367 (6%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C+T GVVL GQGDTGQLGLG DVMERK LV D V++V GGMHTV LT G+V+
Sbjct: 256 CRTVEGVVLVLGQGDTGQLGLGQDVMERKKPGLVAIQDKVIDVCAGGMHTVVLTVKGEVW 315
Query: 92 TWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+WGCNDEGALGR+ +E +E +P V L K Q+ AGDSH++AL DG V+ WG+FRD+
Sbjct: 316 SWGCNDEGALGRDTSEIGTETVPGKVELSSKIAQLGAGDSHTIALTTDGRVWCWGTFRDN 375
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G GL +G +Q P+++ + ++KI+SG H LT G+L T GC EQG+LGRI +
Sbjct: 376 NGQFGLTSDGKVQPRPVEIPLSARVLKISSGESHVACLTEDGDLYTFGCGEQGELGRIAE 435
Query: 210 RSASRNARRGMS-FLEPGEVPLK------RKHID--DVFTGVYNTFISS--KGSILAFGL 258
R R+G S L+P V +K + H+ DVF G +NTF S K + AFG+
Sbjct: 436 CFTVRGGRKGRSLLLDPAPVRMKGKMGSRKSHMKFADVFCGSHNTFAISDDKEDVYAFGM 495
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
NNY Q+G G+ + P ++SLS K++T + GQHH++AL+++G++Y GR
Sbjct: 496 NNYYQMG-------LDGDAARYVPEKVESLSGKRWTQIVGGQHHTVALSADGEVYVMGRG 548
Query: 319 DYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
YGRLGL +++ + VT+PT + L++ I +A G+ VSFA+ G Y WGMG QL
Sbjct: 549 QYGRLGLGEDMDKEVTKPTQLTELRN--ICGVATGSSVSFAVTKNGEPYSWGMGTNLQLA 606
Query: 378 NGKEDDI 384
+DD+
Sbjct: 607 QSNDDDV 613
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 30/226 (13%)
Query: 7 KVLRKQAENP-SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVME----RKT 61
KV + E P S +V S + C T G + T G G+ G+LG + RK
Sbjct: 386 KVQPRPVEIPLSARVLKISSGESHVACLTEDGDLYTFGCGEQGELGRIAECFTVRGGRKG 445
Query: 62 FALVEDLDNV---------------VEVVVGGMHTVCLTEDGK-VYTWGCNDEGALGREA 105
+L+ D V +V G +T +++D + VY +G N+ +G +
Sbjct: 446 RSLLLDPAPVRMKGKMGSRKSHMKFADVFCGSHNTFAISDDKEDVYAFGMNNYYQMGLDG 505
Query: 106 EGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK 163
+ + ++P+ V K+ QI G H+VAL DG VY G R +G +GL GE + K
Sbjct: 506 DA-ARYVPEKVESLSGKRWTQIVGGQHHTVALSADGEVYVMG--RGQYGRLGL-GEDMDK 561
Query: 164 ---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
P +L + I +A+G+ +T G + G QL +
Sbjct: 562 EVTKPTQLTELRNICGVATGSSVSFAVTKNGEPYSWGMGTNLQLAQ 607
>gi|397515820|ref|XP_003828141.1| PREDICTED: regulator of chromosome condensation isoform 1 [Pan
paniscus]
Length = 475
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 89 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 148
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 149 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 208
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 209 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 267
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 268 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 327
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 328 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 380
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 381 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 438
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 66 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 118
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 119 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 170
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 171 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 222
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 223 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 282
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 283 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 342
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 343 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 400
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 401 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSS 460
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 461 GGQHTVLLVKDK 472
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 362 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 421
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 422 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 471
>gi|332031143|gb|EGI70720.1| Regulator of chromosome condensation [Acromyrmex echinatior]
Length = 429
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 237/394 (60%), Gaps = 22/394 (5%)
Query: 6 KKVLRKQAENPSQ-----KVFVTSEAV---PTLKCKTGGGVVLTCGQGDTGQLGLGPDVM 57
+K ++ AE+P Q K + + P L+ + GGV+L GQGD GQLGLG D+
Sbjct: 2 RKSTKRTAEDPVQADKAPKQIKKKQGLSVKPNLRSLSIGGVMLVFGQGDFGQLGLGEDIT 61
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTV 116
E+ A + D +V+ V G MH VCL G+V T+GCNDEGALGR+ + SE +P V
Sbjct: 62 EKMRPAAITDYQDVITVAAGAMHNVCLRNTGEVLTFGCNDEGALGRDTTKEGSETVPGIV 121
Query: 117 NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK 176
LP KA+Q++AGDSH+ ALL+DG V+AWG+FRD+HGSMGL +G ++ P+++ +VK
Sbjct: 122 ELPGKAIQVTAGDSHTAALLDDGRVFAWGTFRDTHGSMGLTLKGNERFPIEILPDVKVVK 181
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-RK- 233
IASG DH V+L+ G + T G EQGQLGR+ R+A RN R+G+ L PG V K RK
Sbjct: 182 IASGNDHLVLLSENGRVYTCGRGEQGQLGRVAARTAGRNTRQGIGLLLTPGVVEFKIRKK 241
Query: 234 -HIDDVFTGVYNTFIS--SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ DD++ G + TF KG I FGLNN+ Q+G D+++ F P + K+ S
Sbjct: 242 LYFDDIWAGNFCTFAKEHEKGDIYVFGLNNFHQIGLKDNDIH-------FHPQISKTFSG 294
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K + ++SG+HH++AL+ G+++ GR +YGRLGL E T + +L I
Sbjct: 295 KVWKHISSGEHHTIALDDAGQVFVMGRKEYGRLGLGPNCSDAEELTLVSALSSTKCIDIG 354
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
G+ SFA+ G LY WGMG LG G D+
Sbjct: 355 AGSRESFAVTESGDLYSWGMGTNGNLGTGDVKDV 388
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 181/401 (45%), Gaps = 67/401 (16%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
V+ G F G +GL GE I + P + ++ +A+GA H V L + G +LT GC
Sbjct: 45 VFGQGDF----GQLGL-GEDITEKMRPAAITDYQDVITVAAGAMHNVCLRNTGEVLTFGC 99
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
++G LGR T + S PG V L K I + + G + A+G
Sbjct: 100 NDEGALGRDTTKEGSETV--------PGIVELPGKAIQVTAGDSHTAALLDDGRVFAWGT 151
Query: 259 --NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+ + +G + GN F I+ L D K +ASG H + L+ G++Y G
Sbjct: 152 FRDTHGSMG-----LTLKGNERF----PIEILPDVKVVKIASGNDHLVLLSENGRVYTCG 202
Query: 317 RHDYGRLGL-------KNVSEPV---TEPTPIPSLQDKTI--TSIACGNCVSFAIDSE-G 363
R + G+LG +N + + P + K + I GN +FA + E G
Sbjct: 203 RGEQGQLGRVAARTAGRNTRQGIGLLLTPGVVEFKIRKKLYFDDIWAGNFCTFAKEHEKG 262
Query: 364 VLYGWGMGNGYQLGNGKEDDI---------------------------LNSEGKIYAFGR 396
+Y +G+ N +Q+G K++DI L+ G+++ GR
Sbjct: 263 DIYVFGLNNFHQIGL-KDNDIHFHPQISKTFSGKVWKHISSGEHHTIALDDAGQVFVMGR 321
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+YGRLGL E T + +L I G+ SFA+ G LY WGMG LG
Sbjct: 322 KEYGRLGLGPNCSDAEELTLVSALSSTKCIDIGAGSRESFAVTESGDLYSWGMGTNGNLG 381
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
G D+ EP+ ++GKQL TV++V+ GGQH++ LA +P
Sbjct: 382 TGDVKDVEEPVLVKGKQLEGKTVVRVSGGGQHTLALATIRP 422
>gi|119628095|gb|EAX07690.1| regulator of chromosome condensation 1, isoform CRA_a [Homo
sapiens]
Length = 506
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 120 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 179
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 180 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 239
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 240 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 298
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 299 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 358
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 359 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 411
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 412 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 469
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 196/430 (45%), Gaps = 51/430 (11%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H TE G V T G D G LG P V++P+ VQ AG H+V L + G
Sbjct: 112 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 171
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
VY++G + G++G EG + P K+E +V++++G H LT G + G
Sbjct: 172 QVYSFGC--NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 229
Query: 198 C--PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G +G + S + P +V L + + +++ G +
Sbjct: 230 SFRDNNGVIGLLEPMKKS---------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYT 280
Query: 256 FGLNNYSQLGEADSEVQ----KSGNTCFFTPH--LIKSLSDK---KFTMLASGQHHSLAL 306
G QLG + G P ++KS + +F G + + A+
Sbjct: 281 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 340
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ EG +Y FG +Y +LG P TE IP N SF +S
Sbjct: 341 SHEGHVYGFGLSNYHQLGT-----PGTESCFIPQ------------NLTSFK-NSTKSWV 382
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
G+ G + + ++SEGK Y+ GR +YGRLGL +E + PT I L ++
Sbjct: 383 GFSGGQHHTV-------CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVS 433
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGG
Sbjct: 434 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGG 493
Query: 487 QHSVILAKPK 496
QH+V+L K K
Sbjct: 494 QHTVLLVKDK 503
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 393 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 452
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 453 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 502
>gi|327199320|ref|NP_001192138.1| regulator of chromosome condensation [Monodelphis domestica]
Length = 421
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 176/384 (45%), Positives = 243/384 (63%), Gaps = 25/384 (6%)
Query: 15 NPSQKVFVTSEAVPTL--KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV 72
+P++ V S+ V +T G+VLT GQGD GQLGLG +V+ERK ALV + +V
Sbjct: 11 SPTENVTTESKKVKVFHRSHRTEAGLVLTLGQGDVGQLGLGEEVIERKRPALVPMPEGIV 70
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSH 131
+ GGMHTVCL + G+VYT+GCNDEGALGR+ + SE +P V+L +K VQ+SAGDSH
Sbjct: 71 QAEAGGMHTVCLGKSGQVYTFGCNDEGALGRDTSVEGSETVPGRVDLSEKVVQVSAGDSH 130
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTS 189
+ AL EDG V+ WGSFRD++G +GL E ++K+ P++++ + ++K+ASG DH VMLT
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIGLL-EPMKKSMVPVQVQLEAPVIKVASGNDHLVMLTV 189
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLKRKH------IDDVFTGV 242
GNL T+GC EQGQLGR+ + A+R R+G+ L P V LK K D F G
Sbjct: 190 DGNLYTSGCGEQGQLGRVPEFFANRGGRKGLERLLIPQCVLLKSKGQRGSVLFQDAFCGA 249
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASG 299
Y TF +S +G + FGL+NY QLG +E C F P + S S K + + G
Sbjct: 250 YFTFAVSREGHVYGFGLSNYHQLGIPSTE------PC-FAPQSLTSFKNSTKSWVGFSGG 302
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
QHH++ L+SEGK+Y+ GR +YGRLGL E + PT I + I+S+ACG V +A+
Sbjct: 303 QHHTVCLDSEGKVYSLGRAEYGRLGLGVGVEEKSSPTLIQKM--PVISSVACGASVGYAV 360
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+G + WGMG YQL G+++D
Sbjct: 361 AKDGRAFAWGMGTNYQLATGEDED 384
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG V E+ + L++ + + V G + +DG+ +
Sbjct: 308 CLDSEGKVYSLGRAEYGRLGLGVGVEEKSSPTLIQKMPVISSVACGASVGYAVAKDGRAF 367
Query: 92 TW--GCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLED 138
W G N + A G + + S + L + V +S+G H+V L+ +
Sbjct: 368 AWGMGTNYQLATGEDEDAWSPVVMAGKQLENRVVLSVSSGGQHTVLLVRN 417
>gi|195174428|ref|XP_002027976.1| GL21365 [Drosophila persimilis]
gi|194115686|gb|EDW37729.1| GL21365 [Drosophila persimilis]
Length = 528
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 224/355 (63%), Gaps = 17/355 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GD GQLGLG D+ ERK A+VE++ N V+V GGMH++ LTE+G +Y++GCN
Sbjct: 42 GTVLVCGTGDFGQLGLGEDIQERKRLAVVENIPNPVDVCAGGMHSLVLTENGDIYSFGCN 101
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ D SE +P V+LP KAV+IS GDSHS +LEDG+VYAWGSFRDSHG+MG
Sbjct: 102 DEGALGRDTSEDGSESVPALVHLPGKAVRISVGDSHSACILEDGSVYAWGSFRDSHGNMG 161
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++ P L + + IASG+DH V+LT+RG + T GC EQGQLGRI+ RS
Sbjct: 162 LTIDGNKRVPANLLAGTVCCSIASGSDHLVILTTRGKVYTVGCAEQGQLGRISGRSVGGE 221
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG-EADSE 270
RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL E D +
Sbjct: 222 GRRGKRDLLRPDQLIVNRTKPFEAIWATNYCTFLRESQTEVIWAVGLNNFKQLAYEQDED 281
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
H IK+ + K ++ G HH+L L ++ + Y GR +YGRLGL + +
Sbjct: 282 ---------LILHPIKT-ALKDIKQISGGIHHTLFLKNDQRCYVVGRPEYGRLGLGSKQD 331
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V + TP +L D I + CG S+AI ++G LY WGMG YQLG G DD L
Sbjct: 332 VVDQLTPANNLSD-NIVHVGCGEISSYAITADGKLYSWGMGTNYQLGVGDGDDEL 385
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 176/393 (44%), Gaps = 60/393 (15%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQ--KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
GTV G+ G +GL GE IQ K +E++ V + +G H ++LT G++ +
Sbjct: 42 GTVLVCGT--GDFGQLGL-GEDIQERKRLAVVENIPNPVDVCAGGMHSLVLTENGDIYSF 98
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
GC ++G LGR T S + P V L K + ++ I GS+ A+
Sbjct: 99 GCNDEGALGRDTSEDGSESV--------PALVHLPGKAVRISVGDSHSACILEDGSVYAW 150
Query: 257 G--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
G +++ +G + GN L ++ +ASG H + L + GK+Y
Sbjct: 151 GSFRDSHGNMG-----LTIDGNKRVPANLLAGTVC----CSIASGSDHLVILTTRGKVYT 201
Query: 315 FGRHDYGRLGL----------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG- 363
G + G+LG + + P + + K +I N +F +S+
Sbjct: 202 VGCAEQGQLGRISGRSVGGEGRRGKRDLLRPDQLIVNRTKPFEAIWATNYCTFLRESQTE 261
Query: 364 VLYGWGMGNGYQLGNGKEDDI------------------------LNSEGKIYAFGRHDY 399
V++ G+ N QL +++D+ L ++ + Y GR +Y
Sbjct: 262 VIWAVGLNNFKQLAYEQDEDLILHPIKTALKDIKQISGGIHHTLFLKNDQRCYVVGRPEY 321
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
GRLGL + + V + TP +L D I + CG S+AI ++G LY WGMG YQLG G
Sbjct: 322 GRLGLGSKQDVVDQLTPANNLSD-NIVHVGCGEISSYAITADGKLYSWGMGTNYQLGVGD 380
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
DD LEP+ + GK N +L + GGQH + L
Sbjct: 381 GDDELEPVLVSGKNTQNRKMLLASGGGQHGLFL 413
>gi|403308348|ref|XP_003944627.1| PREDICTED: regulator of chromosome condensation [Saimiri
boliviensis boliviensis]
Length = 456
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 70 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 129
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 130 DEGALGRDTSVEGSETVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 189
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 190 LL-EPMKKSMVPIQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 248
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 249 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 308
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 309 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRL 361
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 362 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 419
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 195/425 (45%), Gaps = 71/425 (16%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVK 176
P + Q + SHS E G V G + G +GL GE + +K P + +V+
Sbjct: 53 PDQKTQPVSHRSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQ 106
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+G H V L+ G + + GC ++G LGR T S PG+V L+ K +
Sbjct: 107 AEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSETV--------PGKVELQEKVVQ 158
Query: 237 DVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
+ ++ G + +G +N +G + ++KS P I+ D
Sbjct: 159 VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--IQVQLDVPVV 210
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP----- 339
+ASG H + L ++G +Y G + G+LG + E + P +
Sbjct: 211 KVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRG 270
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN--------------------- 378
S CG +FAI EG +YG+G+ N +QLG
Sbjct: 271 SRGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKS 330
Query: 379 ------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG
Sbjct: 331 WVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACG 388
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+
Sbjct: 389 ASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVL 448
Query: 492 LAKPK 496
L K K
Sbjct: 449 LVKDK 453
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 343 CVDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 402
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 403 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 452
>gi|125977322|ref|XP_001352694.1| GA10341 [Drosophila pseudoobscura pseudoobscura]
gi|54641443|gb|EAL30193.1| GA10341 [Drosophila pseudoobscura pseudoobscura]
Length = 530
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 224/355 (63%), Gaps = 17/355 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GD GQLGLG D+ ERK A+VE++ N V+V GGMH++ LTE+G +Y++GCN
Sbjct: 42 GTVLVCGTGDFGQLGLGEDIQERKRLAVVENIPNPVDVCAGGMHSLVLTENGDIYSFGCN 101
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ D SE +P V+LP KAV+IS GDSHS +LEDG+VYAWGSFRDSHG+MG
Sbjct: 102 DEGALGRDTSEDGSESVPALVHLPGKAVRISVGDSHSACILEDGSVYAWGSFRDSHGNMG 161
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++ P L + + IASG+DH V+LT+RG + T GC EQGQLGRI+ RS
Sbjct: 162 LTIDGNKRVPANLLAGTVCSSIASGSDHLVILTTRGKVYTVGCAEQGQLGRISGRSVGGE 221
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG-EADSE 270
RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL E D +
Sbjct: 222 GRRGKRDLLRPDQLIVNRTKPFEAIWATNYCTFLRESQTEVIWAVGLNNFKQLAYEQDED 281
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
H IK+ + K ++ G HH+L L ++ + Y GR +YGRLGL + +
Sbjct: 282 ---------LILHPIKT-ALKDIKQISGGIHHTLFLKNDQRCYVVGRPEYGRLGLGSKQD 331
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V + TP +L D I + CG S+AI ++G LY WGMG YQLG G DD L
Sbjct: 332 VVDQLTPANNLSD-NIVHVGCGEISSYAITADGKLYSWGMGTNYQLGVGDGDDEL 385
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 177/393 (45%), Gaps = 60/393 (15%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQ--KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
GTV G+ G +GL GE IQ K +E++ V + +G H ++LT G++ +
Sbjct: 42 GTVLVCGT--GDFGQLGL-GEDIQERKRLAVVENIPNPVDVCAGGMHSLVLTENGDIYSF 98
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
GC ++G LGR T S + P V L K + ++ I GS+ A+
Sbjct: 99 GCNDEGALGRDTSEDGSESV--------PALVHLPGKAVRISVGDSHSACILEDGSVYAW 150
Query: 257 G--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
G +++ +G + GN L ++ + +ASG H + L + GK+Y
Sbjct: 151 GSFRDSHGNMG-----LTIDGNKRVPANLLAGTVC----SSIASGSDHLVILTTRGKVYT 201
Query: 315 FGRHDYGRLGL----------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG- 363
G + G+LG + + P + + K +I N +F +S+
Sbjct: 202 VGCAEQGQLGRISGRSVGGEGRRGKRDLLRPDQLIVNRTKPFEAIWATNYCTFLRESQTE 261
Query: 364 VLYGWGMGNGYQLGNGKEDDI------------------------LNSEGKIYAFGRHDY 399
V++ G+ N QL +++D+ L ++ + Y GR +Y
Sbjct: 262 VIWAVGLNNFKQLAYEQDEDLILHPIKTALKDIKQISGGIHHTLFLKNDQRCYVVGRPEY 321
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
GRLGL + + V + TP +L D I + CG S+AI ++G LY WGMG YQLG G
Sbjct: 322 GRLGLGSKQDVVDQLTPANNLSD-NIVHVGCGEISSYAITADGKLYSWGMGTNYQLGVGD 380
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
DD LEP+ + GK N +L + GGQH + L
Sbjct: 381 GDDELEPVLVSGKNTQNRKMLLASGGGQHGLFL 413
>gi|74139909|dbj|BAE31793.1| unnamed protein product [Mus musculus]
gi|74151827|dbj|BAE29701.1| unnamed protein product [Mus musculus]
Length = 421
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 232/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y F IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFNFAISREGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 384
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 73/430 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L ++G +Y G + G+LG L + P
Sbjct: 169 QLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRC 228
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ + A CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFNFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PV 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSS 406
Query: 485 GGQHSVILAK 494
GGQH+V+L K
Sbjct: 407 GGQHTVLLVK 416
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>gi|195431549|ref|XP_002063799.1| GK15861 [Drosophila willistoni]
gi|194159884|gb|EDW74785.1| GK15861 [Drosophila willistoni]
Length = 469
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 228/355 (64%), Gaps = 17/355 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V CG GD GQLGLG D++ERK + VE + N+V++ GGMH + LT+ GK+Y++GCN
Sbjct: 42 GKVFVCGFGDIGQLGLGDDIIERKHLSPVESIQNLVDISAGGMHNLVLTKSGKIYSFGCN 101
Query: 97 DEGALGR-EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR E SE +P V LP KA++ISAGDSHS LLEDG V+AWGSFR+SHG+MG
Sbjct: 102 DEGALGRITTEKYSESVPGLVVLPGKALKISAGDSHSACLLEDGRVFAWGSFRNSHGNMG 161
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++ P L V IASG DH V+LT++G + T GC + GQLGRI++RS
Sbjct: 162 LTIDGNKRMPFNLLEGFVCVSIASGVDHLVILTNKGKVYTVGCADHGQLGRISERSLLGE 221
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEV 271
RRG L+P +V +++ K I+ ++T Y TF+ S +I A GLNNYSQLG D +V
Sbjct: 222 GRRGKRDLLQPNQVVIRKAKPIEAIWTSNYCTFLRESVTHNIWAMGLNNYSQLG-YDKKV 280
Query: 272 QKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ L+ +D K ++ G HH+L L++ + Y GR +YGRLGL NV++
Sbjct: 281 DRV---------LMPFKTDLKHIRQISGGDHHTLVLDNNSRCYVIGRPEYGRLGLGNVNK 331
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+E T I ++ K + I CG C S+AID +G LY WG+G +QLG G +D L
Sbjct: 332 VASELTQIRTITSK-VVHIECGTCCSYAIDQDGKLYSWGLGTNHQLGVGDGEDAL 385
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 180/386 (46%), Gaps = 60/386 (15%)
Query: 152 GSMGLKGEGIQKTPLK-LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL + I++ L +ES+ +V I++G H ++LT G + + GC ++G LGRIT
Sbjct: 53 GQLGLGDDIIERKHLSPVESIQNLVDISAGGMHNLVLTKSGKIYSFGCNDEGALGRITTE 112
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEAD 268
S + PG V L K + ++ + G + A+G N++ +G
Sbjct: 113 KYSESV--------PGLVVLPGKALKISAGDSHSACLLEDGRVFAWGSFRNSHGNMG--- 161
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ GN P L +ASG H + L ++GK+Y G D+G+LG +
Sbjct: 162 --LTIDGNKRM--P--FNLLEGFVCVSIASGVDHLVILTNKGKVYTVGCADHGQLG--RI 213
Query: 329 SE------------PVTEPTPIPSLQDKTITSIACGNCVSFAIDS-EGVLYGWGMGNGYQ 375
SE + +P + + K I +I N +F +S ++ G+ N Q
Sbjct: 214 SERSLLGEGRRGKRDLLQPNQVVIRKAKPIEAIWTSNYCTFLRESVTHNIWAMGLNNYSQ 273
Query: 376 LGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
LG K+ D +L++ + Y GR +YGRLGL NV++
Sbjct: 274 LGYDKKVDRVLMPFKTDLKHIRQISGGDHHTLVLDNNSRCYVIGRPEYGRLGLGNVNKVA 333
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+E T I ++ K + I CG C S+AID +G LY WG+G +QLG G +D LEP+ +
Sbjct: 334 SELTQIRTITSKVV-HIECGTCCSYAIDQDGKLYSWGLGTNHQLGVGDGEDALEPVWVNS 392
Query: 472 KQLNNYTVLQVASGGQHSVILAKPKP 497
K + VL +GGQH + L + P
Sbjct: 393 KAILEKRVLLADAGGQHGIFLVEANP 418
>gi|355764243|gb|EHH62271.1| hypothetical protein EGM_20510 [Macaca fascicularis]
Length = 452
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 237/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 66 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 125
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 126 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 185
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLG + + A+
Sbjct: 186 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGCVPELFAN 244
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 245 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 304
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 305 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRL 357
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 358 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 415
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 190/414 (45%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 57 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 113
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 114 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MIPGKVELQEKVVQVSAGDSHTAAL 165
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P ++ D +ASG H +
Sbjct: 166 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQVQLDVPVVKVASGNDHLVM 217
Query: 306 LNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP-----SLQDKTITSIA 350
L + G +Y G + G+LG + E + P + S
Sbjct: 218 LTAGGDLYTLGCGEQGQLGCVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 277
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 278 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 337
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 338 VCVDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 395
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 396 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 449
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 339 CVDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 398
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 399 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 448
>gi|395856828|ref|XP_003800820.1| PREDICTED: regulator of chromosome condensation isoform 2 [Otolemur
garnettii]
Length = 452
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 236/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 66 GLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 125
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 126 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 185
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A
Sbjct: 186 LL-EPMKKSMVPIQVQLDAPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAI 244
Query: 214 RNARRGM-SFLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R RRG+ L P V LK R H+ D F G TF IS +G + FGL+NY QLG
Sbjct: 245 RGGRRGLEKLLVPKCVMLKSRGNRDHVRFQDAFCGACFTFAISLEGHVYGFGLSNYHQLG 304
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + G HH++ ++SEGK Y+ GR +YGRL
Sbjct: 305 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGLHHTVCMDSEGKAYSLGRAEYGRL 357
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 358 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFSWGMGTNYQLGTGQDED 415
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 192/414 (46%), Gaps = 68/414 (16%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + IV+ +G H V L
Sbjct: 57 SHRSHNTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVPIPEDIVQAEAGGMHTVCL 113
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 114 SKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAAL 165
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G + ++KS P I+ D +ASG H +
Sbjct: 166 TEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--IQVQLDAPVVKVASGNDHLVM 217
Query: 306 LNSEGKIYAFGRHDYGRLG--------------LKNVSEPVTEPTPIPSLQDKTITSIA- 350
L ++G +Y G + G+LG L+ + P +D A
Sbjct: 218 LTADGDLYTLGCGEQGQLGRVPELFAIRGGRRGLEKLLVPKCVMLKSRGNRDHVRFQDAF 277
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDI------------------------- 384
CG C +FAI EG +YG+G+ N +QLG G E
Sbjct: 278 CGACFTFAISLEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGLHHT 337
Query: 385 --LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 338 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 395
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 396 RVFSWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 449
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 339 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 398
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
+WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 399 SWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 448
>gi|198455071|ref|XP_002138000.1| GA27527 [Drosophila pseudoobscura pseudoobscura]
gi|198133080|gb|EDY68558.1| GA27527 [Drosophila pseudoobscura pseudoobscura]
Length = 462
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 234/375 (62%), Gaps = 15/375 (4%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
P +++ + +A+ K + G VL CG GD GQLGLG D+ ER+ A+VE + V+V
Sbjct: 27 PVKRMRIAFQAMGIPKRRQTVGTVLVCGTGDFGQLGLGEDIQERRRLAVVESIPGPVDVC 86
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
GGMH++ LT+ G +Y++GCNDEGALGR+ +E SE +P V LP KAV+IS GDSHS
Sbjct: 87 AGGMHSLVLTQSGDIYSFGCNDEGALGRDTSEEGSESLPDLVRLPGKAVRISVGDSHSAC 146
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLL 194
LLEDG+VYAWGSFRDSHG+MGL EG ++ P L + + IASG+DH V+LT+ G +
Sbjct: 147 LLEDGSVYAWGSFRDSHGNMGLTIEGNKRVPENLLAGTVCCSIASGSDHLVILTTMGKVY 206
Query: 195 TAGCPEQGQLGRITQRSASRNARRG-MSFLEPGEVPLK-RKHIDDVFTGVYNTFI--SSK 250
T GC EQGQLGRI++RS + RRG L+P ++ + K + ++ Y TF+ S
Sbjct: 207 TIGCAEQGQLGRISERSVGGDGRRGKCDLLQPNQLIVHGSKPFEAIWATPYCTFLRESQT 266
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+I A GLNN+ QL D +V + H I++ S K+ + G H+L L ++
Sbjct: 267 ETIWAVGLNNFKQLA-CDKDVLR-------ILHPIRT-SLKQINQICGGTQHTLFLKNDQ 317
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ Y GR +YGRLGL + + V E TP +L I + CG+ S+AI +G LY WGM
Sbjct: 318 RCYVVGRPEYGRLGLGSQQDVVAELTPTINLP-ANIVHVGCGDISSYAITEDGKLYAWGM 376
Query: 371 GNGYQLGNGKEDDIL 385
GN YQLG G +DD L
Sbjct: 377 GNSYQLGVGDDDDQL 391
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 177/403 (43%), Gaps = 76/403 (18%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQ--KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
GTV G+ G +GL GE IQ + +ES+ G V + +G H ++LT G++ +
Sbjct: 48 GTVLVCGT--GDFGQLGL-GEDIQERRRLAVVESIPGPVDVCAGGMHSLVLTQSGDIYSF 104
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
GC ++G LGR T S + P V L K + ++ + GS+ A+
Sbjct: 105 GCNDEGALGRDTSEEGSESL--------PDLVRLPGKAVRISVGDSHSACLLEDGSVYAW 156
Query: 257 G--LNNYSQLG---EADSEVQK---SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G +++ +G E + V + +G C +ASG H + L +
Sbjct: 157 GSFRDSHGNMGLTIEGNKRVPENLLAGTVC---------------CSIASGSDHLVILTT 201
Query: 309 EGKIYAFGRHDYGRLGLKNVSE------------PVTEPTPIPSLQDKTITSIACGNCVS 356
GK+Y G + G+LG +SE + +P + K +I +
Sbjct: 202 MGKVYTIGCAEQGQLG--RISERSVGGDGRRGKCDLLQPNQLIVHGSKPFEAIWATPYCT 259
Query: 357 FAIDSEG-VLYGWGMGNGYQL------------------------GNGKEDDILNSEGKI 391
F +S+ ++ G+ N QL G + L ++ +
Sbjct: 260 FLRESQTETIWAVGLNNFKQLACDKDVLRILHPIRTSLKQINQICGGTQHTLFLKNDQRC 319
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
Y GR +YGRLGL + + V E TP +L I + CG+ S+AI +G LY WGMGN
Sbjct: 320 YVVGRPEYGRLGLGSQQDVVAELTPTINLP-ANIVHVGCGDISSYAITEDGKLYAWGMGN 378
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
YQLG G +DD LEP + GK + N +L + GG H++ L +
Sbjct: 379 SYQLGVGDDDDQLEPALVGGKSIQNRKMLLASGGGHHALFLGE 421
>gi|195428731|ref|XP_002062419.1| GK17526 [Drosophila willistoni]
gi|194158504|gb|EDW73405.1| GK17526 [Drosophila willistoni]
Length = 482
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/355 (48%), Positives = 229/355 (64%), Gaps = 17/355 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GDTGQLGLG D+MERK +E + + V++ GGMH + LT G++Y++GCN
Sbjct: 42 GKVLVCGTGDTGQLGLGEDIMERKRLTPLETIAHPVDICAGGMHNLVLTNSGEIYSFGCN 101
Query: 97 DEGALGREA-EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ E SE P ++LP KA++ISAGDSHS LLEDG V+AWGSFRDSHG+MG
Sbjct: 102 DEGALGRDTTEEGSESSPGLIDLPGKALKISAGDSHSACLLEDGRVFAWGSFRDSHGNMG 161
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++ P+ L + V IASGADH V+LT+ G + T GC EQGQLGRI++RS S
Sbjct: 162 LTIDGNKRMPINLLEGTICVSIASGADHLVILTNSGKVYTVGCAEQGQLGRISERSVSGE 221
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEV 271
RRG L P ++ +KR K I+ ++ Y TF+ S +I A GLNNY QL D EV
Sbjct: 222 GRRGKRDLLRPDQLIIKRSKPIEAIWATNYCTFLRESITNTIWAVGLNNYWQLAH-DKEV 280
Query: 272 QKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
++ L+ +D K ++ GQHH+L L+ + + GR +YGRLGL +V E
Sbjct: 281 ERV---------LLPVKTDLKHIRQISGGQHHTLLLDDDLRCLVVGRPEYGRLGLGDVKE 331
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V++ T +P ++ K I + CG C S+AI +G LY WGMG+ QLG G +D L
Sbjct: 332 VVSKLTEVPKMKSKLIY-VGCGECCSYAIAEDGKLYSWGMGSNNQLGVGDGEDEL 385
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 58/382 (15%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE I +K LE+++ V I +G H ++LT+ G + + GC ++G LGR T
Sbjct: 53 GQLGL-GEDIMERKRLTPLETIAHPVDICAGGMHNLVLTNSGEIYSFGCNDEGALGRDTT 111
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++ PG + L K + ++ + G + A+G +++ +G
Sbjct: 112 EEGSESS--------PGLIDLPGKALKISAGDSHSACLLEDGRVFAWGSFRDSHGNMG-- 161
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-- 325
+ GN I L +ASG H + L + GK+Y G + G+LG
Sbjct: 162 ---LTIDGNKRMP----INLLEGTICVSIASGADHLVILTNSGKVYTVGCAEQGQLGRIS 214
Query: 326 -KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDS-EGVLYGWGMGNGYQL 376
++VS + P + + K I +I N +F +S ++ G+ N +QL
Sbjct: 215 ERSVSGEGRRGKRDLLRPDQLIIKRSKPIEAIWATNYCTFLRESITNTIWAVGLNNYWQL 274
Query: 377 GNGKEDDIL------------------------NSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+ KE + + + + + GR +YGRLGL +V E V+
Sbjct: 275 AHDKEVERVLLPVKTDLKHIRQISGGQHHTLLLDDDLRCLVVGRPEYGRLGLGDVKEVVS 334
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
+ T +P ++ K I + CG C S+AI +G LY WGMG+ QLG G +D LEP+ ++ K
Sbjct: 335 KLTEVPKMKSKLIY-VGCGECCSYAIAEDGKLYSWGMGSNNQLGVGDGEDELEPVLVQSK 393
Query: 473 QLNNYTVLQVASGGQHSVILAK 494
+ +L GGQHS+ L +
Sbjct: 394 ATSEKRILMADGGGQHSIFLVE 415
>gi|395856826|ref|XP_003800819.1| PREDICTED: regulator of chromosome condensation isoform 1 [Otolemur
garnettii]
Length = 421
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 236/360 (65%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV +++V+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A
Sbjct: 155 LL-EPMKKSMVPIQVQLDAPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAI 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R RRG+ L P V LK R H+ D F G TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRRGLEKLLVPKCVMLKSRGNRDHVRFQDAFCGACFTFAISLEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + G HH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGLHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFSWGMGTNYQLGTGQDED 384
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 200/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
IV+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P I+
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--IQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L ++G +Y G + G+LG L+ + P
Sbjct: 169 QLDAPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAIRGGRRGLEKLLVPKC 228
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDI------- 384
+D A CG C +FAI EG +YG+G+ N +QLG G E
Sbjct: 229 VMLKSRGNRDHVRFQDAFCGACFTFAISLEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 385 --------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGLHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVTKDGRVFSWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
+WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 SWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 417
>gi|195157504|ref|XP_002019636.1| GL12502 [Drosophila persimilis]
gi|194116227|gb|EDW38270.1| GL12502 [Drosophila persimilis]
Length = 462
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 233/375 (62%), Gaps = 15/375 (4%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
P +++ + +A+ K + G VL CG GD GQLGLG D+ ER+ A+VE + V+V
Sbjct: 27 PVKRMRIAFQAMGIPKRRQTVGTVLVCGTGDFGQLGLGEDIQERRRLAVVESIPGPVDVC 86
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
GGMH++ LT+ G +Y++GCNDEGALGR+ +E SE +P V LP KAV+IS GDSHS
Sbjct: 87 AGGMHSLVLTQSGDIYSFGCNDEGALGRDTSEEGSESLPALVRLPGKAVRISVGDSHSAC 146
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLL 194
LLEDG+VYAWGSFRDSHG+MGL EG ++ P L + + IASG+DH V+LT+ G +
Sbjct: 147 LLEDGSVYAWGSFRDSHGNMGLTIEGNKRVPENLLAGTVCCSIASGSDHLVILTTMGKVY 206
Query: 195 TAGCPEQGQLGRITQRSASRNARRG-MSFLEPGEVPLK-RKHIDDVFTGVYNTFI--SSK 250
T GC EQGQLGRI++RS RRG L+P ++ + K + ++ Y TF+ S
Sbjct: 207 TIGCAEQGQLGRISERSVGGEGRRGKRDLLQPNQLIVHGSKPFEAIWATNYCTFLRESQT 266
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+I A GLNN+ QL D +V + H I++ S ++ + G H+L L ++
Sbjct: 267 ETIWAVGLNNFKQLA-CDKDVIR-------ILHPIRT-SLRQINQICGGTQHTLFLKNDQ 317
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ Y GR +YGRLGL + + V E TP +L I + CG+ S+AI +G LY WGM
Sbjct: 318 RCYVVGRPEYGRLGLGSQQDVVAELTPTINLP-ANIVHVGCGDISSYAITEDGKLYAWGM 376
Query: 371 GNGYQLGNGKEDDIL 385
GN YQLG G +DD L
Sbjct: 377 GNSYQLGVGDDDDQL 391
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 176/401 (43%), Gaps = 72/401 (17%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQ--KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
GTV G+ G +GL GE IQ + +ES+ G V + +G H ++LT G++ +
Sbjct: 48 GTVLVCGT--GDFGQLGL-GEDIQERRRLAVVESIPGPVDVCAGGMHSLVLTQSGDIYSF 104
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
GC ++G LGR T S + P V L K + ++ + GS+ A+
Sbjct: 105 GCNDEGALGRDTSEEGSESL--------PALVRLPGKAVRISVGDSHSACLLEDGSVYAW 156
Query: 257 G--LNNYSQLG---EADSEVQK---SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G +++ +G E + V + +G C +ASG H + L +
Sbjct: 157 GSFRDSHGNMGLTIEGNKRVPENLLAGTVC---------------CSIASGSDHLVILTT 201
Query: 309 EGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
GK+Y G + G+LG + + +P + K +I N +F
Sbjct: 202 MGKVYTIGCAEQGQLGRISERSVGGEGRRGKRDLLQPNQLIVHGSKPFEAIWATNYCTFL 261
Query: 359 IDSEG-VLYGWGMGNGYQL------------------------GNGKEDDILNSEGKIYA 393
+S+ ++ G+ N QL G + L ++ + Y
Sbjct: 262 RESQTETIWAVGLNNFKQLACDKDVIRILHPIRTSLRQINQICGGTQHTLFLKNDQRCYV 321
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
GR +YGRLGL + + V E TP +L I + CG+ S+AI +G LY WGMGN Y
Sbjct: 322 VGRPEYGRLGLGSQQDVVAELTPTINLP-ANIVHVGCGDISSYAITEDGKLYAWGMGNSY 380
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QLG G +DD LEP + GK + N +L + GG H++ L +
Sbjct: 381 QLGVGDDDDQLEPALVGGKSIQNRKMLLASGGGHHALFLGE 421
>gi|443686928|gb|ELT90046.1| hypothetical protein CAPTEDRAFT_159495 [Capitella teleta]
Length = 446
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 229/356 (64%), Gaps = 15/356 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G LT G GDTGQLGLG D+M+R ALV+ +V++ GGMHT CLT+DGKV+T+GCN
Sbjct: 64 GQTLTIGTGDTGQLGLGEDIMDRARPALVKIDGEIVQIAAGGMHTACLTKDGKVFTFGCN 123
Query: 97 DEGALGREA-EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR E + F P V+L K VQISAGDSH+ AL +DG +Y WG+FRD++GS+G
Sbjct: 124 DEGALGRSTPEEEDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWGTFRDANGSIG 183
Query: 156 LKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
L+ + TP+ L S ++K+ASG DH + LT G + + G +QGQLGR+ + ++R
Sbjct: 184 LQTPKTRSPTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTR 243
Query: 215 NARRGMS-FLEPGEV--PLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSE 270
R+G+S L P V L++ DV+TG + +F + G I ++GLNNY Q+G D
Sbjct: 244 GGRKGLSLLLTPAAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIG-FDDM 302
Query: 271 VQKSGNTCFFTPHLIKSL-SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNV 328
V + + P KS +D + ++ GQHH++AL++ G++Y GR DYG LGL NV
Sbjct: 303 VNR------YVPDRCKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNV 356
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+E +EPT + SL+D +++ CG+ VS A+ G +Y WGMG QLG ++DD+
Sbjct: 357 TEEKSEPTAVTSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQQLGQAEDDDL 412
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 178/385 (46%), Gaps = 54/385 (14%)
Query: 152 GSMGLKGEGIQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL + + + L + G IV+IA+G H LT G + T GC ++G LGR T
Sbjct: 75 GQLGLGEDIMDRARPALVKIDGEIVQIAAGGMHTACLTKDGKVFTFGCNDEGALGRSTPE 134
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
EP V LK K + + ++ G + +G + G +
Sbjct: 135 EED--------CFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWGTFRDAN-GSIGLQ 185
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----- 325
K+ +P I LS ++ +ASG H L L G+I++ G D G+LG
Sbjct: 186 TPKT-----RSPTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECF 240
Query: 326 ------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-- 377
K +S +T L+ T + G SFA G +Y WG+ N +Q+G
Sbjct: 241 STRGGRKGLSLLLTPAAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFD 300
Query: 378 ------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGL-KNVSEPV 411
G+ I L++ G++Y GR DYG LGL NV+E
Sbjct: 301 DMVNRYVPDRCKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEK 360
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+EPT + SL+D +++ CG+ VS A+ G +Y WGMG QLG ++DD+ EP +I
Sbjct: 361 SEPTAVTSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQQLGQAEDDDLYEPTQIIS 420
Query: 472 KQLNNYTVLQVASGGQHSVILAKPK 496
KQ+ + V++GGQH+VILAK K
Sbjct: 421 KQMETRDGIMVSAGGQHTVILAKDK 445
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V T G+ D G LGLG +V E K+ V L +V V G ++ + E+G VY W
Sbjct: 337 GQVYTLGRKDYGVLGLGDNVTEEKSEPTAVTSLKDVKCSAVTCGSAVSLAVAENGAVYAW 396
Query: 94 G--CNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLED 138
G CN + LG +AE D + P + + + +SAG H+V L +D
Sbjct: 397 GMGCNQQ--LG-QAEDDDLYEPTQIISKQMETRDGIMVSAGGQHTVILAKD 444
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVME----RKTFALVEDLDNV-- 71
Q+V + + C T G + + G D GQLG + RK +L+ V
Sbjct: 201 QRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRGGRKGLSLLLTPAAVHC 260
Query: 72 -------VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV- 123
+V GG + T+ G +Y+WG N+ +G + + + ++P K +
Sbjct: 261 KLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFD-DMVNRYVPDRCKSFKTDLD 319
Query: 124 --QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
IS G H++AL +G VY G R +G +GL
Sbjct: 320 WKDISGGQHHTIALDANGQVYTLG--RKDYGVLGL 352
>gi|307213459|gb|EFN88881.1| Regulator of chromosome condensation [Harpegnathos saltator]
Length = 366
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 213/346 (61%), Gaps = 17/346 (4%)
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKK 121
A++ D +++ + GGMH +CL + G + T+GCNDEGALGR+ + SE +P TV LP K
Sbjct: 4 AVIPDHQDIIAIAAGGMHNICLKKTGDILTFGCNDEGALGRDTSKEGSETVPGTVELPGK 63
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
A+Q++AGDSHS ALLEDG +AWGSFRDSHG+MGL +G ++ P+++ +VKIASGA
Sbjct: 64 AIQVTAGDSHSAALLEDGRAFAWGSFRDSHGTMGLTLKGNERLPIEILPNIKVVKIASGA 123
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPL---KRKHIDD 237
DH V+L+ G + T GC EQGQLGR+ R+ASRN R+GM L P V K+ D
Sbjct: 124 DHLVLLSESGRVYTCGCGEQGQLGRVAARTASRNTRQGMGPLLTPSLVEFKVSKKLEFAD 183
Query: 238 VFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
++ G Y TF S KG I FGLNNY Q+G D+ F P + K+ S K +
Sbjct: 184 IWAGTYCTFAKESQKGDIYVFGLNNYYQIGLKDAATH-------FHPQMSKTFSGKVWKH 236
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++SGQHH++AL+ EG+++ GR +YGRLGL E T +P+L + G+
Sbjct: 237 ISSGQHHTIALDDEGQVFVMGRKEYGRLGLGTNCTDAKELTLVPALSSAKCIHVGVGSAQ 296
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR 401
SFA+ G LY WGMG QLG G+E D+ E I GR G+
Sbjct: 297 SFAVTELGELYSWGMGTSGQLGTGEEVDV---EEPILVKGRQLDGK 339
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 58/365 (15%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I+ IA+G H + L G++LT GC ++G LGR T + S PG V L K
Sbjct: 12 IIAIAAGGMHNICLKKTGDILTFGCNDEGALGRDTSKEGSETV--------PGTVELPGK 63
Query: 234 HIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I ++ + G A+G +++ +G + GN P I+ L +
Sbjct: 64 AIQVTAGDSHSAALLEDGRAFAWGSFRDSHGTMG-----LTLKGNERL--P--IEILPNI 114
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTE---PTPIPSLQDKT 345
K +ASG H + L+ G++Y G + G+LG + S + P PSL +
Sbjct: 115 KVVKIASGADHLVLLSESGRVYTCGCGEQGQLGRVAARTASRNTRQGMGPLLTPSLVEFK 174
Query: 346 ITS------IACGNCVSFAIDSE-GVLYGWGMGNGYQLG--------------------- 377
++ I G +FA +S+ G +Y +G+ N YQ+G
Sbjct: 175 VSKKLEFADIWAGTYCTFAKESQKGDIYVFGLNNYYQIGLKDAATHFHPQMSKTFSGKVW 234
Query: 378 ----NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
+G+ I L+ EG+++ GR +YGRLGL E T +P+L + G+
Sbjct: 235 KHISSGQHHTIALDDEGQVFVMGRKEYGRLGLGTNCTDAKELTLVPALSSAKCIHVGVGS 294
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
SFA+ G LY WGMG QLG G+E D+ EP+ ++G+QL+ TV++V GGQH++ L
Sbjct: 295 AQSFAVTELGELYSWGMGTSGQLGTGEEVDVEEPILVKGRQLDGKTVVRVTGGGQHTLAL 354
Query: 493 AKPKP 497
A +P
Sbjct: 355 ATVRP 359
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + G+LGLG + + K LV L + + V VG + +TE G++Y+WG
Sbjct: 251 GQVFVMGRKEYGRLGLGTNCTDAKELTLVPALSSAKCIHVGVGSAQSFAVTELGELYSWG 310
Query: 95 CNDEGALGREAEGDSE--FIPQTVNLP-KKAVQISAGDSHSVAL 135
G LG E D E + + L K V+++ G H++AL
Sbjct: 311 MGTSGQLGTGEEVDVEEPILVKGRQLDGKTVVRVTGGGQHTLAL 354
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 33/215 (15%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG------------------LGPDVM 57
P+ KV + L + G V TCG G+ GQLG L P ++
Sbjct: 112 PNIKVVKIASGADHLVLLSESGRVYTCGCGEQGQLGRVAARTASRNTRQGMGPLLTPSLV 171
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTED--GKVYTWGCNDEGALGREAEGDSEFIPQT 115
E K +E D + G + E G +Y +G N+ +G + + + F PQ
Sbjct: 172 EFKVSKKLEFAD-----IWAGTYCTFAKESQKGDIYVFGLNNYYQIGLK-DAATHFHPQM 225
Query: 116 VNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE---S 170
V IS+G H++AL ++G V+ G R +G +GL L L S
Sbjct: 226 SKTFSGKVWKHISSGQHHTIALDDEGQVFVMG--RKEYGRLGLGTNCTDAKELTLVPALS 283
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ + + G+ +T G L + G GQLG
Sbjct: 284 SAKCIHVGVGSAQSFAVTELGELYSWGMGTSGQLG 318
>gi|327315376|ref|NP_001192151.1| regulator of chromosome condensation [Ciona intestinalis]
Length = 477
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/363 (46%), Positives = 227/363 (62%), Gaps = 25/363 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
GV LT GQGD GQLGLG D+M RK A+V + + V +VV GGMHTVCLT+ K+YT+G
Sbjct: 87 GVALTVGQGDMGQLGLGEDIMSRKKPAIVASIADEKVKKVVAGGMHTVCLTDQHKIYTFG 146
Query: 95 CNDEGALGRE-AEGDSEFIPQTVNLP---KKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
CNDE ALGR+ A+ DSE+ P+ + P ++ V ISAGDSH+ AL + G V+ WGSFRD
Sbjct: 147 CNDEFALGRDTADDDSEYEPKLIVGPLTERRVVHISAGDSHTCALTDGGKVFVWGSFRDG 206
Query: 151 HGSMGL-KGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL K E + K P +L S++ +V + SG DH VM+T G + T GCP+QGQ+GRI
Sbjct: 207 RGVIGLIKEEEVCKCPTQLTSINETVVDVDSGNDHLVMVTMSGKVFTMGCPDQGQIGRIG 266
Query: 209 QRSASR-NARRGMSFLEPGEVPLKRKH------IDDVFTGVYNTFI-SSKGSILAFGLNN 260
+ R R+ +++ P ++ L++ I VF G Y T++ SS+G + FGLNN
Sbjct: 267 RYFTDRGRKRKTANYITPAKIHLRKVRGSKKPVIVKVFCGSYTTWVLSSEGHVYGFGLNN 326
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y QLG D E + + P +++LSD +A GQHH+L L+ +G +Y GR DY
Sbjct: 327 YKQLGFPDGENR-------YIPEYVETLSDIGCKQIAGGQHHTLVLDHKGSVYTIGRGDY 379
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
GRLG + +EP I SL D ITSI +CVSFA+D +G YGWG+G QL G
Sbjct: 380 GRLGHGSDVIEASEPKKINSLCD--ITSITATSCVSFAVDKDGKAYGWGLGTNLQLTTGD 437
Query: 381 EDD 383
E+D
Sbjct: 438 EED 440
>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
magnipapillata]
Length = 441
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 230/372 (61%), Gaps = 29/372 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G +LT GQGD GQLGLG +V+ERK A++++++ N ++V GGMHT+ ++E G+VY+WG
Sbjct: 38 GHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGEVYSWG 97
Query: 95 CNDEGALGREAEGDS--EFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
CND+GALGR EG EFIP+ V LP+ + V SAGDSHS AL +DG V+AWG++RD+
Sbjct: 98 CNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAGDSHSAALTDDGRVFAWGAYRDA 157
Query: 151 HGSMGL-------KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G +GL K E I+ P + VK+ SG DH V+LTS G + T+G EQGQ
Sbjct: 158 SGQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGNDHTVILTSEGLIYTSGTGEQGQ 217
Query: 204 LGRITQRSASRNARRGMSF-LEPGEVPLKRKHI-DDVFTGVYNTFISSKGS--ILAFGLN 259
LGRI + R RRG+ L P V ++K D+F G + TF S+ + + A+GLN
Sbjct: 218 LGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWGLN 277
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK-----FTMLASGQHHSLALNSEGKIYA 314
NY QLG +E FF P +I+SLS+ + + + GQHHS+ + GK Y+
Sbjct: 278 NYGQLGSGTTE-------NFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVADGNGKTYS 330
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
GR +YGRLGL ++ + P I SL+ + + IACG VSFA+ +G LY WG+G
Sbjct: 331 IGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIACGEAVSFAVTDKGHLYSWGLGTSL 390
Query: 375 QLGNGKEDDILN 386
QLG G ++DI +
Sbjct: 391 QLGVGDDEDIFD 402
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 182/401 (45%), Gaps = 70/401 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +GL GE + +K P ++ V G+ +++ G H + ++ G + + GC + G LGR
Sbjct: 49 GQLGL-GENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGEVYSWGCNDDGALGRP 107
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV---YNTFISSKGSILAFGL--NNYS 262
T+ G F+ P +V L + I V+ ++ ++ G + A+G +
Sbjct: 108 TE------GTDGEEFI-PRKVLLPQG-IRVVYASAGDSHSAALTDDGRVFAWGAYRDASG 159
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
Q+G + + K P D + SG H++ L SEG IY G + G+
Sbjct: 160 QIGLTAASIGKKNEVIKIYPK--GDQIDDPAVKVVSGNDHTVILTSEGLIYTSGTGEQGQ 217
Query: 323 LGL----------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGWGMG 371
LG + E + P + + + + I G+ +FA+ + +Y WG+
Sbjct: 218 LGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWGLN 277
Query: 372 NGYQLGNGKEDDILNSE-------------------------------GKIYAFGRHDYG 400
N QLG+G ++ N E GK Y+ GR +YG
Sbjct: 278 NYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVADGNGKTYSIGRSEYG 337
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
RLGL ++ + P I SL+ + + IACG VSFA+ +G LY WG+G QLG G +
Sbjct: 338 RLGLGKDAKETSLPKKIDSLEKENVVKIACGEAVSFAVTDKGHLYSWGLGTSLQLGVGDD 397
Query: 461 DDILEPMKIEGKQLNNYT-----VLQVASGGQHSVILAKPK 496
+DI +P + Q NN T VL V++GGQH+ IL + +
Sbjct: 398 EDIFDPSLV---QSNNLTLAQDEVLAVSAGGQHTAILVRKR 435
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 144/352 (40%), Gaps = 53/352 (15%)
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-----ITQRS 211
K + QK ES+ K A D V G++LT G + GQLG +R
Sbjct: 6 KKDNRQKRKTIDESIKSPEKYAKKDDKLVQKV--GHILTLGQGDVGQLGLGENVLERKRP 63
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
A G++F++ G++ +S G + ++G N+ LG
Sbjct: 64 AMIKEVEGVNFIQV------------TCGGMHTIGVSEHGEVYSWGCNDDGALGRP---- 107
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVS 329
+ + F P + + ++G HS AL +G+++A+G R G++GL S
Sbjct: 108 TEGTDGEEFIPRKVLLPQGIRVVYASAGDSHSAALTDDGRVFAWGAYRDASGQIGLTAAS 167
Query: 330 ----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V + P D + GN + + SEG++Y G G QLG KE
Sbjct: 168 IGKKNEVIKIYPKGDQIDDPAVKVVSGNDHTVILTSEGLIYTSGTGEQGQLGRIKE---- 223
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVL 444
FG H GR GL E + P + + + + I G+ +FA+ + +
Sbjct: 224 -------CFG-HRGGRRGL----EIILSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDV 271
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEG-----KQLNNYTVLQVASGGQHSVI 491
Y WG+ N QLG+G ++ P I+ + N Y LQ+ G HS++
Sbjct: 272 YAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGY--LQIHGGQHHSIV 321
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG------------------LG 53
Q ++P+ KV ++ L T G++ T G G+ GQLG L
Sbjct: 183 QIDDPAVKVVSGNDHTVIL---TSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILS 239
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED-GKVYTWGCNDEGALGR---EAEGDS 109
P V+ + D + G T L+ D VY WG N+ G LG E +
Sbjct: 240 PQVVRFRKKQFFSD------IFAGSFCTFALSRDTNDVYAWGLNNYGQLGSGTTENFFNP 293
Query: 110 EFIPQTVNLPKKA---VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-P 165
E I + + A +QI G HS+ +G Y+ G R +G +GL + + + P
Sbjct: 294 EVIQSLSEIREHANGYLQIHGGQHHSIVADGNGKTYSIG--RSEYGRLGLGKDAKETSLP 351
Query: 166 LKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
K++S+ +VKIA G +T +G+L + G QLG
Sbjct: 352 KKIDSLEKENVVKIACGEAVSFAVTDKGHLYSWGLGTSLQLG 393
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYT 92
G G + G+ + G+LGLG D E ++ L +NVV++ G + +T+ G +Y+
Sbjct: 324 GNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIACGEAVSFAVTDKGHLYS 383
Query: 93 WGCNDEGALGREAEGDSE--FIP---QTVNLP---KKAVQISAGDSHSVALLE 137
WG LG GD E F P Q+ NL + + +SAG H+ L+
Sbjct: 384 WGLGTSLQLGV---GDDEDIFDPSLVQSNNLTLAQDEVLAVSAGGQHTAILVR 433
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
K+D ++ G I G+ D G+LGL +NV E P I ++ + CG + +
Sbjct: 29 KDDKLVQKVGHILTLGQGDVGQLGLGENVLER-KRPAMIKEVEGVNFIQVTCGGMHTIGV 87
Query: 439 DSEGVLYGWGMGNGYQLGN---GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G +Y WG + LG G + + P K+ Q V+ ++G HS L
Sbjct: 88 SEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQ--GIRVVYASAGDSHSAAL 142
>gi|241750184|ref|XP_002405888.1| regulator of chromosome condensation, putative [Ixodes scapularis]
gi|215505995|gb|EEC15489.1| regulator of chromosome condensation, putative [Ixodes scapularis]
Length = 405
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/371 (44%), Positives = 224/371 (60%), Gaps = 16/371 (4%)
Query: 24 SEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
+EA+P K + G + G GD GQLGLGPDV+E+ ALV +VV+VV GGMH++
Sbjct: 5 NEAIPKAKRRELVGQAYSLGTGDVGQLGLGPDVLEKSRPALVAGHTDVVDVVAGGMHSLL 64
Query: 84 LTEDGKVYTWGCNDEGALGREAEG--DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
L+ G+V+++GCNDEGALGR+ SE P V LP+ +SAGDSHS AL G V
Sbjct: 65 LSSTGQVFSFGCNDEGALGRQTSSLDGSETTPGAVELPEPVTHVSAGDSHSAALTVSGAV 124
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ WGSFRDS G MGL G + P + GIV+IASG DH V+L+ G LLT G EQ
Sbjct: 125 FVWGSFRDSSGFMGLLAAG-KSEPKPVHIADGIVQIASGNDHLVLLSKDGRLLTLGDAEQ 183
Query: 202 GQLGRITQRSASRNARRGMS-FLEPGEVPLKRKH------IDDVFTGVYNTF--ISSKGS 252
GQLGR+ + ASR R+G+S L+P V + + D V+TG Y TF + G+
Sbjct: 184 GQLGRVARCFASRGGRKGLSNLLQPMPVVVSKPRGCSSAAFDHVWTGSYVTFARMRDNGA 243
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ FGLNNY QLG S SG+ F P L+ S ++ ++ + GQHH++ L+ EG +
Sbjct: 244 LYGFGLNNYHQLGSLAS--TSSGDLVQFMPTLLTSCTEHRWKKVCGGQHHTMLLDEEGGV 301
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
YA GRHDYGRLGL P +P L I+CG+ VSFA+ +EG ++ WG+G+
Sbjct: 302 YAMGRHDYGRLGLGPDCTEQETPRKVPGL--PPCVDISCGDSVSFAVTAEGRVFSWGLGD 359
Query: 373 GYQLGNGKEDD 383
QLG+G + +
Sbjct: 360 NLQLGHGDDSE 370
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 186/427 (43%), Gaps = 63/427 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G+ Y+ G D G LG + + P V V + AG HS+ L G V+++G
Sbjct: 18 GQAYSLGTGDVGQLGLGPDVLEKSRPALVAGHTDVVDVVAGGMHSLLLSSTGQVFSFGC- 76
Query: 148 RDSHGSMGLKG---EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ G++G + +G + TP +E + +++G H LT G + G
Sbjct: 77 -NDEGALGRQTSSLDGSETTPGAVELPEPVTHVSAGDSHSAALTVSGAVFVWG------- 128
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN-----TFISSKGSILAFGLN 259
+ R++ M L G+ K HI D + + +S G +L G
Sbjct: 129 -------SFRDSSGFMGLLAAGKSEPKPVHIADGIVQIASGNDHLVLLSKDGRLLTLGDA 181
Query: 260 NYSQLGEAD----SEVQKSGNTCFFTPHLI-----KSLSDKKFTMLASGQHHSLA-LNSE 309
QLG S + G + P + + S F + +G + + A +
Sbjct: 182 EQGQLGRVARCFASRGGRKGLSNLLQPMPVVVSKPRGCSSAAFDHVWTGSYVTFARMRDN 241
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF--AIDSEGVLYG 367
G +Y FG ++Y +LG ++ S + G+ V F + + +
Sbjct: 242 GALYGFGLNNYHQLG--------------------SLASTSSGDLVQFMPTLLTSCTEHR 281
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
W G Q +L+ EG +YA GRHDYGRLGL P +P L
Sbjct: 282 WKKVCGGQ----HHTMLLDEEGGVYAMGRHDYGRLGLGPDCTEQETPRKVPGL--PPCVD 335
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGG 486
I+CG+ VSFA+ +EG ++ WG+G+ QLG+G + +D+ EP + GK +++ L V+ GG
Sbjct: 336 ISCGDSVSFAVTAEGRVFSWGLGDNLQLGHGDDSEDVHEPKVMTGKLISSKKALLVSGGG 395
Query: 487 QHSVILA 493
QH++ILA
Sbjct: 396 QHALILA 402
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ D G+LGLGPD E++T V L V++ G + +T +G+V++WG
Sbjct: 299 GGVYAMGRHDYGRLGLGPDCTEQETPRKVPGLPPCVDISCGDSVSFAVTAEGRVFSWGLG 358
Query: 97 DEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLED 138
D LG + + P+ + KKA+ +S G H++ L D
Sbjct: 359 DNLQLGHGDDSEDVHEPKVMTGKLISSKKALLVSGGGQHALILAID 404
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G+ Y+ G D G+LGL P + +K+ ++ G+ D V+ G
Sbjct: 18 GQAYSLGTGDVGQLGLG------------PDVLEKSRPALVAGH-----TDVVDVVAG-- 58
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G +L+S G++++FG +D G LG + S +E TP + +T ++
Sbjct: 59 ---------GMHSLLLSSTGQVFSFGCNDEGALGRQTSSLDGSETTPGAVELPEPVTHVS 109
Query: 430 CGNCVSFAIDSEGVLYGWGM---GNGYQ--LGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
G+ S A+ G ++ WG +G+ L GK + +P+ I ++Q+AS
Sbjct: 110 AGDSHSAALTVSGAVFVWGSFRDSSGFMGLLAAGKSEP--KPVHIADG------IVQIAS 161
Query: 485 GGQHSVILAK 494
G H V+L+K
Sbjct: 162 GNDHLVLLSK 171
>gi|387015158|gb|AFJ49698.1| Regulator of chromosome condensation-like [Crotalus adamanteus]
Length = 424
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 236/370 (63%), Gaps = 32/370 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLGPDV+ RK AL++ + +++ GG+HTVCL+E GK+YT+GCN
Sbjct: 30 GLVLTLGQGDLGQLGLGPDVLARKRPALLQLPEKIIQAEAGGVHTVCLSETGKIYTFGCN 89
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ +E S+ +P V+L +K VQ+SAGDSH+ AL EDG V+ WG+FRD +G +G
Sbjct: 90 DEGALGRDTSEEGSDAVPGLVDLKEKVVQVSAGDSHTAALTEDGHVFIWGAFRDENGVIG 149
Query: 156 L----KGEGIQKT------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
L KGE ++ P++L+ +VKIASG+ H +++S GNL T GC + GQLG
Sbjct: 150 LLAPQKGEENSQSTSGSLFPVELQLDVPVVKIASGSHHLALVSSTGNLYTCGCGDNGQLG 209
Query: 206 RITQRSASRNARRGMS-FLEPGEVPLKRK------HIDDVFTGVYNTF-ISSKGSILAFG 257
R+ Q R RRG+ L P V +K++ +I DVF G Y+T I+ +G ++ FG
Sbjct: 210 RVPQIFVVRGGRRGLERLLLPQVVTIKQRGCKTKGNIRDVFCGSYSTIAITQEGHVVGFG 269
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAF 315
L+NY QLG + +++P ++ + S + + +SGQHH++ L+SEG +Y+
Sbjct: 270 LSNYYQLGSQEI-------ATYYSPKILTAFKNSTRSWVGFSSGQHHTVCLDSEGTVYSL 322
Query: 316 GRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
GR DYG LGL K V E PT +P L TS+ACG V F++ +G + WGMG+
Sbjct: 323 GRADYGMLGLGKGVGEK-NSPTAVPGLPKS--TSVACGERVGFSVTEDGHAFAWGMGSNL 379
Query: 375 QLGNGKEDDI 384
QL G E+D+
Sbjct: 380 QLATGDEEDV 389
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ D G LGLG V E+ + V L V G +TEDG +
Sbjct: 312 CLDSEGTVYSLGRADYGMLGLGKGVGEKNSPTAVPGLPKSTSVACGERVGFSVTEDGHAF 371
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP------KKAVQISAGDSHSVALLED 138
WG L A GD E + V + + + ++AG H+V L++D
Sbjct: 372 AWGMGSNLQL---ATGDEEDVWSPVQMSGQQLENRSVLSVTAGGQHTVLLVKD 421
>gi|194750136|ref|XP_001957486.1| GF10433 [Drosophila ananassae]
gi|190624768|gb|EDV40292.1| GF10433 [Drosophila ananassae]
Length = 477
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 228/352 (64%), Gaps = 15/352 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG GDTGQLGLG DV+ERK + V+ + + V+V GGMH + LT++G++Y++GCN
Sbjct: 40 GKVLVCGTGDTGQLGLGEDVLERKRLSEVQGIPDPVDVCAGGMHNLVLTKNGEIYSFGCN 99
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ +E SE P ++LPKKAV +SAGDSHS L+EDG+VYAWGSFRDSHG+MG
Sbjct: 100 DEGALGRDTSEEGSEAQPGKIDLPKKAVSVSAGDSHSACLMEDGSVYAWGSFRDSHGNMG 159
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L +G ++TP+ L + I+SGADH V+LT+ G + T GC EQGQLGRI++RS S
Sbjct: 160 LTMDGNKRTPINLLEGTVCCSISSGADHLVILTNGGKVYTVGCAEQGQLGRISERSVSGE 219
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI-SSKGSI-LAFGLNNYSQLGEADSEV 271
RRG L P ++ + R + D ++T Y TF+ S+ I AFGLNNY Q+ ++
Sbjct: 220 GRRGKRDLLRPDQLIIPRTRPFDTIWTTNYCTFLRESRTEITWAFGLNNYKQVAHP-KDI 278
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
++ TP +K+ + ++ G HH++ L ++ K GRH+YGRLGL ++E
Sbjct: 279 ER-----VLTP--VKT-DFQNIRQISGGAHHTILLGNDLKCSVIGRHNYGRLGLGQLTED 330
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
VT+ T + L DK I + G S+A+ G LY WG+G QLG G DD
Sbjct: 331 VTKLTALDKLSDK-IVYVGGGESCSYAVAENGKLYSWGIGTSNQLGVGDGDD 381
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 171/381 (44%), Gaps = 60/381 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL + +++ +L V GI V + +G H ++LT G + + GC ++G LGR T
Sbjct: 51 GQLGLGEDVLERK--RLSEVQGIPDPVDVCAGGMHNLVLTKNGEIYSFGCNDEGALGRDT 108
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S +PG++ L +K + ++ + GS+ A+G +++ +G
Sbjct: 109 SEEGSE--------AQPGKIDLPKKAVSVSAGDSHSACLMEDGSVYAWGSFRDSHGNMG- 159
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I L ++SG H + L + GK+Y G + G+LG
Sbjct: 160 ----LTMDGNK--RTP--INLLEGTVCCSISSGADHLVILTNGGKVYTVGCAEQGQLGRI 211
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
++VS + P + + + +I N +F +S + + +G+ N Q
Sbjct: 212 SERSVSGEGRRGKRDLLRPDQLIIPRTRPFDTIWTTNYCTFLRESRTEITWAFGLNNYKQ 271
Query: 376 LGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
+ + K+ + +L ++ K GRH+YGRLGL ++E V
Sbjct: 272 VAHPKDIERVLTPVKTDFQNIRQISGGAHHTILLGNDLKCSVIGRHNYGRLGLGQLTEDV 331
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
T+ T + L DK I + G S+A+ G LY WG+G QLG G DD EP+ +
Sbjct: 332 TKLTALDKLSDK-IVYVGGGESCSYAVAENGKLYSWGIGTSNQLGVGDGDDEWEPVVVSS 390
Query: 472 KQLNNYTVLQVASGGQHSVIL 492
K N L GGQH++ L
Sbjct: 391 KNTQNRRALLATGGGQHAIFL 411
>gi|354475663|ref|XP_003500047.1| PREDICTED: regulator of chromosome condensation-like [Cricetulus
griseus]
gi|344242291|gb|EGV98394.1| Regulator of chromosome condensation [Cricetulus griseus]
Length = 421
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/362 (45%), Positives = 227/362 (62%), Gaps = 19/362 (5%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
KT G+VLT GQ D GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY+
Sbjct: 31 KTEPGLVLTLGQRDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYS 90
Query: 93 WGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+GCNDEGALGRE + SE +P V L +K VQ+SAGDSH+ L EDG V+ WGSFRD++
Sbjct: 91 FGCNDEGALGRETSVEGSEMVPGKVELQEKVVQVSAGDSHTAVLTEDGRVFLWGSFRDNN 150
Query: 152 GSMG-LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G LK P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ +
Sbjct: 151 RVIGYLKPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTEGDLYTLGCGEQGQLGRVPEL 210
Query: 211 SASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
A+++ R+G+ L P V LK R D F G Y TF IS +G + FGL+NY
Sbjct: 211 FANQSVRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYFTFAISHEGHMYGFGLSNYH 270
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM-LASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D+ +CF +L + KF + ++GQ H++ ++SEG Y+ R +YG
Sbjct: 271 QLGTPDTA------SCFIPQNLTSFKNSTKFCVGFSTGQQHTICVDSEGNAYSLARAEYG 324
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
RLGL E + PT I L ++S+ACG V ++ +G ++ WGMG YQLG G++
Sbjct: 325 RLGLGEGVEEKSIPTLISWL--PVVSSVACGASVGCSVSKDGCVFAWGMGTNYQLGTGQD 382
Query: 382 DD 383
+D
Sbjct: 383 ED 384
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 189/416 (45%), Gaps = 72/416 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G RD G +GL GE + +K P + + +V+ +G H V L
Sbjct: 26 SHRSHKTEPGLVLTLGQ-RDV-GQLGL-GESVLERKKPALVPLLQDVVQAEAGGMHTVCL 82
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 83 SQSGQVYSFGCNDEGALGRETSVEGSE--------MVPGKVELQEKVVQVSAGDSHTAVL 134
Query: 248 SSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ G + +G +N +G ++KS P ++ D +ASG H +
Sbjct: 135 TEDGRVFLWGSFRDNNRVIGYLKP-MKKS-----MVP--VQVQLDMPVVKVASGNDHLVM 186
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA--------------- 350
L +EG +Y G + G+LG V E + L+ +
Sbjct: 187 LTTEGDLYTLGCGEQGQLG--RVPELFANQSVRQGLERLLVPKCVLLKSRGSRGRVRFQD 244
Query: 351 --CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKE 381
CG +FAI EG +YG+G+ N +QLG G++
Sbjct: 245 AFCGAYFTFAISHEGHMYGFGLSNYHQLGTPDTASCFIPQNLTSFKNSTKFCVGFSTGQQ 304
Query: 382 DDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
I ++SEG Y+ R +YGRLGL E + PT I L ++S+ACG V ++
Sbjct: 305 HTICVDSEGNAYSLARAEYGRLGLGEGVEEKSIPTLISWL--PVVSSVACGASVGCSVSK 362
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G ++ WGMG YQLG G+++D P+++ GK+L N VL V+SGGQH+V+L K K
Sbjct: 363 DGCVFAWGMGTNYQLGTGQDEDDWSPVEMTGKKLENRVVLTVSSGGQHTVLLVKDK 418
>gi|390345132|ref|XP_001186731.2| PREDICTED: regulator of chromosome condensation-like
[Strongylocentrotus purpuratus]
Length = 424
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/369 (46%), Positives = 228/369 (61%), Gaps = 19/369 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALV--EDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL GQGD GQLGLG D+MERK +LV + +V+VV GGMHTVC+ +DG VYT+G
Sbjct: 38 GFVLAFGQGDVGQLGLGEDIMERKKPSLVSFDGAKRIVDVVAGGMHTVCIAQDGAVYTFG 97
Query: 95 CNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CNDEGALGRE + D SEFI V L K +Q +AGDSH+ AL ++G VYAWG+FRD +G
Sbjct: 98 CNDEGALGRETKEDGSEFISGKVALDAKIIQATAGDSHTAALTDEGKVYAWGTFRDGNGP 157
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+GL EG++KTP + +V+IASG DH MLT++G + T GC EQGQLGRI + +
Sbjct: 158 VGLTVEGMKKTPYLIPLDETVVQIASGNDHLCMLTNQGEIYTMGCGEQGQLGRIHECFSI 217
Query: 214 RNARRGMS-FLEPGEVPLKRKH------IDDVFTGVYNTF--ISSKGSILAFGLNNYSQL 264
R R+G+S LEP V KR D V+ Y TF + G + +GLNNY L
Sbjct: 218 RGGRKGVSILLEPSIVICKRVRGKGKVMFDGVWCSNYCTFARVKGGGGMYGWGLNNYHHL 277
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + + +FTP I S +D + ++ GQHHS+ L+++G ++A GR +YGRLG
Sbjct: 278 GLENVK-------SWFTPQPITSFNDVQVEAVSGGQHHSILLDAQGHMHAIGRTNYGRLG 330
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
L E PT I +++ + T+I CG VS G +Y GMG+ QLGNG ED+
Sbjct: 331 LGEDCEESHIPTLISAVKMEKFTNIGCGASVSLGCTDTGDVYACGMGSNLQLGNGDEDED 390
Query: 385 LNSEGKIYA 393
L+ KI +
Sbjct: 391 LHVPTKIIS 399
>gi|195492131|ref|XP_002093858.1| GE20522 [Drosophila yakuba]
gi|194179959|gb|EDW93570.1| GE20522 [Drosophila yakuba]
Length = 515
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/380 (44%), Positives = 228/380 (60%), Gaps = 14/380 (3%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
+Q + P K + + K +T G VL CG GD GQLGLG D++ERK + V + +
Sbjct: 17 EQLQPPKAKRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPD 76
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGD 129
V++ GGMH + LT+ G +Y++GCNDEGALGR+ D SE P + LP KA+ ISAGD
Sbjct: 77 AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSEAKPDLIELPGKALCISAGD 136
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
SHS LLEDG V+AWGSFRDSHG+MGL +G ++TP+ L + IASGADH V+LT+
Sbjct: 137 SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTT 196
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI 247
G + T GC EQGQLGR+++RS S RRG L P ++ + R K + ++ Y TF+
Sbjct: 197 AGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFM 256
Query: 248 --SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
S I A GLNN+ QL + G TP IK+ K +A GQHH++
Sbjct: 257 RESQTEVIWATGLNNFKQLAH-----ETKGKEFAVTP--IKT-ELKDIRHIAGGQHHTVI 308
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L ++ K GR +YGRLGL +V + V +PT + L DK + S+ CG S+A+ +G L
Sbjct: 309 LTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTLVEKLTDK-VVSVGCGEVCSYAVTEDGKL 367
Query: 366 YGWGMGNGYQLGNGKEDDIL 385
Y WG G QLG G DD L
Sbjct: 368 YSWGSGVNNQLGVGDGDDEL 387
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 176/384 (45%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 54 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 111
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S +P + L K + ++ + G + A+G +++ +G
Sbjct: 112 SEDGSE--------AKPDLIELPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 162
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I + +ASG H + L + GK++ G + G+LG
Sbjct: 163 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 214
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 215 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQ 274
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 275 LAHETKGKEFAVTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 334
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L DK + S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 335 VEKPTLVEKLTDKVV-SVGCGEVCSYAVTEDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 393
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 394 SKNTQGKHMLLASGGGQHAIFLVK 417
>gi|195588086|ref|XP_002083789.1| GD13166 [Drosophila simulans]
gi|194195798|gb|EDX09374.1| GD13166 [Drosophila simulans]
Length = 564
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 222/360 (61%), Gaps = 14/360 (3%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K +T G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 36 KRRTVIGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 91 YTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ D SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASGADH V+LT+ G + T GC EQGQLGR+++
Sbjct: 156 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQLA 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP IK+ K +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 276 H-----ETKGKEFALTP--IKT-ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 328 GDVKDVVEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 386
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 53 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S + +P + L K + ++ + G + A+G +++ +G
Sbjct: 111 SEDGSES--------KPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 161
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I + +ASG H + L + GK++ G + G+LG
Sbjct: 162 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQ 273
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 274 LAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 333
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 334 VEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLVK 416
>gi|195337773|ref|XP_002035500.1| GM13884 [Drosophila sechellia]
gi|194128593|gb|EDW50636.1| GM13884 [Drosophila sechellia]
Length = 545
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 222/360 (61%), Gaps = 14/360 (3%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K +T G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 36 KRRTVIGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 91 YTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ D SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASGADH V+LT+ G + T GC EQGQLGR+++
Sbjct: 156 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQLA 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP IK+ K +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 276 H-----ETKGKEFALTP--IKT-ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 328 GDVKDVVEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 386
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 53 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S + +P + L K + ++ + G + A+G +++ +G
Sbjct: 111 SEDGSES--------KPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 161
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I + +ASG H + L + GK++ G + G+LG
Sbjct: 162 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQ 273
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 274 LAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 333
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 334 VEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLVK 416
>gi|18859625|ref|NP_523943.1| Bj1 protein, isoform A [Drosophila melanogaster]
gi|24658881|ref|NP_729118.1| Bj1 protein, isoform B [Drosophila melanogaster]
gi|24658888|ref|NP_729119.1| Bj1 protein, isoform C [Drosophila melanogaster]
gi|14286164|sp|P25171.2|RCC1_DROME RecName: Full=Regulator of chromosome condensation; AltName:
Full=Chromatin-binding protein Bj1
gi|7295409|gb|AAF50726.1| Bj1 protein, isoform A [Drosophila melanogaster]
gi|7295410|gb|AAF50727.1| Bj1 protein, isoform B [Drosophila melanogaster]
gi|17944233|gb|AAL48011.1| LD22520p [Drosophila melanogaster]
gi|23095602|gb|AAN12235.1| Bj1 protein, isoform C [Drosophila melanogaster]
gi|220944742|gb|ACL84914.1| Bj1-PA [synthetic construct]
Length = 547
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 222/360 (61%), Gaps = 14/360 (3%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K +T G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 36 KRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 91 YTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ D SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASGADH V+LT+ G + T GC EQGQLGR+++
Sbjct: 156 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLA 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP IK+ K +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 276 H-----ETKGKEFALTP--IKT-ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 328 GDVKDVVEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 386
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 176/384 (45%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 53 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S + +P + L K + ++ + G + A+G +++ +G
Sbjct: 111 SEDGSES--------KPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 161
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRL 323
+ GN TP I + +ASG H + L + GK++ G + GRL
Sbjct: 162 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 324 GLKNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQ 273
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 274 LAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 333
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 334 VEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLVK 416
>gi|194867327|ref|XP_001972047.1| GG14100 [Drosophila erecta]
gi|190653830|gb|EDV51073.1| GG14100 [Drosophila erecta]
Length = 515
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 239/404 (59%), Gaps = 24/404 (5%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K KT G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 36 KRKTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 91 YTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ +E SE P+ ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 96 YSFGCNDEGALGRDTSEEGSEAKPELIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASG+DH V+LT+ G + T GC EQGQLGR+++
Sbjct: 156 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGSDHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQLA 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP + L D +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 276 H-----ETKGKEFALTP-IRTELKD--IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 328 GDVKDVVEKPTLVKKLTEK-IVSVGCGEVCSYAVTEDGKLYSWGSGVNNQLGVGDGDDEL 386
Query: 386 --------NSEGK--IYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
N++GK + A G + +K + E P+ S
Sbjct: 387 EPIVVVSKNTQGKHMLLASGGGQHAIFLIKADKQDQKENVPVKS 430
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 176/384 (45%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 53 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S +P + L K + ++ + G + A+G +++ +G
Sbjct: 111 SEEGSE--------AKPELIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 161
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I + +ASG H + L + GK++ G + G+LG
Sbjct: 162 ----LTIDGNK--RTP--IDLMEGTVCCSIASGSDHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTEVIWATGLNNFKQ 273
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 274 LAHETKGKEFALTPIRTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 333
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 334 VEKPTLVKKLTEK-IVSVGCGEVCSYAVTEDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLIK 416
>gi|7660|emb|CAA41417.1| BJ1 chromatin binding protein [Drosophila melanogaster]
Length = 547
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 222/360 (61%), Gaps = 14/360 (3%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K +T G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 36 KRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 91 YTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ D SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASGADH V+LT+ G + T GC EQGQLGR+++
Sbjct: 156 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLA 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP IK+ K +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 276 H-----ETKGKEFALTP--IKT-ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 328 GDVKDVVEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 386
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 53 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S + +P + L K + ++ + G + A+G +++ +G
Sbjct: 111 SEDGSES--------KPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 161
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I + +ASG H + L + GK++ G + G+LG
Sbjct: 162 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQ 273
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 274 LAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 333
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 334 VEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLVK 416
>gi|304445931|pdb|3MVD|K Chain K, Crystal Structure Of The Chromatin Factor Rcc1 In Complex
With The Nucleosome Core Particle
gi|304445932|pdb|3MVD|L Chain L, Crystal Structure Of The Chromatin Factor Rcc1 In Complex
With The Nucleosome Core Particle
Length = 423
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 222/360 (61%), Gaps = 14/360 (3%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K +T G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 37 KRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 96
Query: 91 YTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ D SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 97 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 156
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASGADH V+LT+ G + T GC EQGQLGR+++
Sbjct: 157 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 216
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 217 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLA 276
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP IK+ K +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 277 H-----ETKGKEFALTP--IKT-ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 328
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 329 GDVKDVVEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 387
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 54 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 111
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S + +P + L K + ++ + G + A+G +++ +G
Sbjct: 112 SEDGSES--------KPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 162
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
+ GN TP I + +ASG H + L + GK++ G + G+LG
Sbjct: 163 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 214
Query: 326 --KNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 215 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQ 274
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 275 LAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 334
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 335 VEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 393
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 394 SKNTQGKHMLLASGGGQHAIFLVK 417
>gi|357626115|gb|EHJ76321.1| hypothetical protein KGM_02344 [Danaus plexippus]
Length = 575
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/341 (48%), Positives = 219/341 (64%), Gaps = 15/341 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGC 95
G V+TCGQGD GQLGLG +VME F V L N +V+VV GGMHTV L DGKV+T+GC
Sbjct: 44 GCVMTCGQGDVGQLGLGENVMETTKFKTVSVLGNKIVDVVAGGMHTVALDSDGKVWTFGC 103
Query: 96 NDEGALGREAEGDS-EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
NDEGALGR D+ E P+ V LP AV +SAGDSHS ALL++G V+AWGSFRDSHGSM
Sbjct: 104 NDEGALGRPTSSDTDEGTPKQVTLPLPAVAVSAGDSHSAALLQNGDVFAWGSFRDSHGSM 163
Query: 155 GLKGEGIQ----KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G + K P++++ V +ASG DH V+LT+ G++ T GC EQGQLGR+ QR
Sbjct: 164 GLVVRGREGKPCKEPVRVDLGESAVGVASGGDHLVILTNTGSVYTMGCGEQGQLGRLAQR 223
Query: 211 SASRNARRGMS-FLEPGEVPLKRKHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEA 267
SASR+AR+G S L P +V LK V+ G + TF+ +S + A+GLNNY QLG
Sbjct: 224 SASRDARQGFSALLVPSKVILKGGAC-RVWAGYHATFVMDASSDKMFAWGLNNYGQLG-I 281
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
E +K T ++P + +++T +++GQHHSLA++ G ++ GR +YGRLGL
Sbjct: 282 TGEKRK---TAIYSPTECDGMRGRRWTDVSAGQHHSLAVDERGLAHSVGRCEYGRLGLGR 338
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+ V+ IP LQD T ++ G SFA+ G + W
Sbjct: 339 DGDAVSWEA-IPKLQDDTCVCVSAGTSSSFAVTQTGRVVCW 378
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 37 GVVLTCGQGDTGQLGLGPD--VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G+ + G+ + G+LGLG D + + ++D D V V G + +T+ G+V WG
Sbjct: 321 GLAHSVGRCEYGRLGLGRDGDAVSWEAIPKLQD-DTCVCVSAGTSSSFAVTQTGRVVCWG 379
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
D + P L +A++++AG H+V L+ED T
Sbjct: 380 -AGGEGQLGLGGSDDQLEPTPAQLEGRALRVTAGGQHTVVLVEDPTA 425
>gi|327289459|ref|XP_003229442.1| PREDICTED: regulator of chromosome condensation-like [Anolis
carolinensis]
Length = 420
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 236/391 (60%), Gaps = 26/391 (6%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD 69
RK+ V V V +T G++LT GQGD GQLGLGP+VM RK ALV+ +
Sbjct: 3 RKRVLEKDDIVSVKRTKVSHPTHQTEPGLLLTLGQGDLGQLGLGPNVMARKRPALVQLPE 62
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAG 128
+++ GG+HTVCLTE GK+YT+GCNDEGALGR+ +E SE P V+L +K VQ+SAG
Sbjct: 63 KIIQAEAGGVHTVCLTETGKIYTFGCNDEGALGRDTSEEGSESTPGLVDLKEKVVQVSAG 122
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGL----KGEGIQKTPL--KLESVSGIVKIASGAD 182
DSH+ AL EDG V+ WG+FRD +G +GL KGE +PL +L+ +VKIASG+
Sbjct: 123 DSHTAALTEDGRVFIWGAFRDENGVIGLLAPQKGEENVGSPLPVELQLDVPVVKIASGSH 182
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQR-SASRNARRGMSFLEPGEVPLKRK------HI 235
H +++ GNL T GC + GQLGR+ Q +A R L P + +K++ I
Sbjct: 183 HLALVSMAGNLYTCGCGDNGQLGRVPQVFTARGGRRGLKLLLLPQTISVKQRGCKTKGRI 242
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKK 292
DVF G Y+T I+ +G ++ FGL+NY QLG E ++ P ++ + S +
Sbjct: 243 RDVFCGSYSTLAITQEGHVIGFGLSNYYQLGSQGIET-------YYLPKILTAFKNSSRS 295
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ ++GQHH++ L+SEG +Y+ GR DYG LGL S PT IP + +S+ACG
Sbjct: 296 WVKFSAGQHHTVCLDSEGTVYSLGRADYGMLGLGQGSAEKATPTAIPGVPKS--SSVACG 353
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
V FA+ +G + WGMG+ QLG G+EDD
Sbjct: 354 ERVGFAVTEDGRAFAWGMGSNLQLGTGEEDD 384
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 172/380 (45%), Gaps = 58/380 (15%)
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
+K P ++ I++ +G H V LT G + T GC ++G LGR T S +
Sbjct: 52 RKRPALVQLPEKIIQAEAGGVHTVCLTETGKIYTFGCNDEGALGRDTSEEGSEST----- 106
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
PG V LK K + + ++ G + +G + G + G +
Sbjct: 107 ---PGLVDLKEKVVQVSAGDSHTAALTEDGRVFIWGAFR-DENGVIGLLAPQKGEENVGS 162
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE------- 334
P ++ D +ASG HH ++ G +Y G D G+LG V + T
Sbjct: 163 PLPVELQLDVPVVKIASGSHHLALVSMAGNLYTCGCGDNGQLG--RVPQVFTARGGRRGL 220
Query: 335 -----PTPIPSLQD--KT---ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------ 378
P I Q KT I + CG+ + AI EG + G+G+ N YQLG+
Sbjct: 221 KLLLLPQTISVKQRGCKTKGRIRDVFCGSYSTLAITQEGHVIGFGLSNYYQLGSQGIETY 280
Query: 379 ---------------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
G+ + L+SEG +Y+ GR DYG LGL S PT
Sbjct: 281 YLPKILTAFKNSSRSWVKFSAGQHHTVCLDSEGTVYSLGRADYGMLGLGQGSAEKATPTA 340
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
IP + + S+ACG V FA+ +G + WGMG+ QLG G+EDD P+++ G+QL N
Sbjct: 341 IPGVPKSS--SVACGERVGFAVTEDGRAFAWGMGSNLQLGTGEEDDAWSPVQMSGQQLEN 398
Query: 477 YTVLQVASGGQHSVILAKPK 496
TVL V+ GGQH+V+L K K
Sbjct: 399 RTVLSVSGGGQHTVLLVKDK 418
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 132/316 (41%), Gaps = 34/316 (10%)
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H T G LLT G + GQLG M+ P V L K I GV
Sbjct: 22 HPTHQTEPGLLLTLGQGDLGQLGL---------GPNVMARKRPALVQLPEKIIQAEAGGV 72
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ ++ G I FG N+ LG SE TP L+ +K +++G H
Sbjct: 73 HTVCLTETGKIYTFGCNDEGALGRDTSEEGSES-----TPGLVDL--KEKVVQVSAGDSH 125
Query: 303 SLALNSEGKIYAFG--RHDYGRLGL---KNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+ AL +G+++ +G R + G +GL + E V P P+ D + IA G+
Sbjct: 126 TAALTEDGRVFIWGAFRDENGVIGLLAPQKGEENVGSPLPVELQLDVPVVKIASGSHHLA 185
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
+ G LY G G+ QLG ++ GR GLK + P T
Sbjct: 186 LVSMAGNLYTCGCGDNGQLG------------RVPQVFTARGGRRGLKLLLLPQTISVKQ 233
Query: 418 PSLQDK-TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
+ K I + CG+ + AI EG + G+G+ N YQLG+ + P + + ++
Sbjct: 234 RGCKTKGRIRDVFCGSYSTLAITQEGHVIGFGLSNYYQLGSQGIETYYLPKILTAFKNSS 293
Query: 477 YTVLQVASGGQHSVIL 492
+ ++ ++G H+V L
Sbjct: 294 RSWVKFSAGQHHTVCL 309
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
Query: 2 THLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT 61
T+ L K+L +N S+ S C G V + G+ D G LGLG E+ T
Sbjct: 279 TYYLPKILTA-FKNSSRSWVKFSAGQHHTVCLDSEGTVYSLGRADYGMLGLGQGSAEKAT 337
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV--NLP 119
+ + V G +TEDG+ + WG LG E D+ Q L
Sbjct: 338 PTAIPGVPKSSSVACGERVGFAVTEDGRAFAWGMGSNLQLGTGEEDDAWSPVQMSGQQLE 397
Query: 120 KKAV-QISAGDSHSVALLED 138
+ V +S G H+V L++D
Sbjct: 398 NRTVLSVSGGGQHTVLLVKD 417
>gi|47220834|emb|CAG00041.1| unnamed protein product [Tetraodon nigroviridis]
Length = 434
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 170/395 (43%), Positives = 224/395 (56%), Gaps = 56/395 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL GQGD GQLG G DV++RK +LV + V+V GGMHTVCL+E G VYT+GCN
Sbjct: 11 GQVLVLGQGDVGQLGHGEDVLQRKKPSLVSLPEKTVQVEAGGMHTVCLSESGHVYTFGCN 70
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGRE E SE +P V+L +K VQ+SAGDSH+ AL EDG V+ WG+FRD++G +G
Sbjct: 71 DEGALGRETTEEGSEMVPGKVSLDEKVVQVSAGDSHTAALTEDGRVFVWGAFRDNNGVIG 130
Query: 156 L-KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
L + K P++L +VK+ASG DH VM+T GNL T G EQGQLGR+ + ++R
Sbjct: 131 LVEPLKTSKVPVELSMTEPVVKVASGNDHVVMVTLEGNLYTVGTGEQGQLGRVAEIFSNR 190
Query: 215 NARRGM-------------------------------------------SFLEPGEVPLK 231
R+G+ FL P V +K
Sbjct: 191 GGRQGLGRLKSPPGGPDHFRTRRSLTACGFYGWRLPEESRLTAAPVIADRFLIPQIVIIK 250
Query: 232 RK-HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI-KSL 288
K D F G Y TF SK G + FGL+NY QLG K+ TCFF L
Sbjct: 251 GKVQFVDAFCGSYVTFAVSKDGHVYGFGLSNYHQLG------TKNTKTCFFPVKLTCFKN 304
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
S + + GQHH++ L++EG++Y+ GR +YGRLGL +E +EPT + ++ S
Sbjct: 305 STVSWVEFSGGQHHTVCLDAEGQVYSLGRAEYGRLGLGQGTEEKSEPTLVTGIE--AACS 362
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ CG VS+A+ EG +Y WGMG QLG G+E+D
Sbjct: 363 VTCGASVSYAVTKEGAVYAWGMGTNLQLGTGEEED 397
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG E+ LV ++ V G + +T++G VY
Sbjct: 321 CLDAEGQVYSLGRAEYGRLGLGQGTEEKSEPTLVTGIEAACSVTCGASVSYAVTKEGAVY 380
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV---NLPKKAVQI-SAGDSHSVALLED 138
WG LG E D E+ P + L +AV + S+G H+ L++D
Sbjct: 381 AWGMGTNLQLGTGEEED-EWSPVRMTGKQLENRAVLMASSGGQHTALLVKD 430
>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
Length = 429
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 227/371 (61%), Gaps = 30/371 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G+VL GQG+ GQLGLG +++ER V+ L V ++V GG+HTV LT+ G++YTWG
Sbjct: 37 GIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWG 96
Query: 95 CNDEGALGREAE--GDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
CNDE ALGR+ ++E++P V+ K +Q+SAGD+H+ AL +DG V+ WG+F D+
Sbjct: 97 CNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDN 156
Query: 151 HGSMGLKGEGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GS+GL G Q P+ + + ++KI SG +H LT+ G + T GC EQGQLGR+
Sbjct: 157 RGSIGLNLAGKQPRPIVMLGDPNDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVA 216
Query: 209 QRSASRNARRGMS-FLEPGEVPLKRK-----HIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
+R SR+ R+G+ FL+P + ++ D+F G YN F +++ G + A GLNNY
Sbjct: 217 ERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGPYNLFAVNAAGEVFACGLNNY 276
Query: 262 SQLGEADSEVQKSGN-TCFFTPHLIKSLS------DKKFTMLASGQHHSLALNSEGKIYA 314
Q+G +GN T + I SLS D++ ++ASG+HH+L L G++Y+
Sbjct: 277 GQIG--------NGNITSLYYLAKIDSLSALNDGNDERQILIASGEHHTLILARNGRVYS 328
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
GR DYGRLGL + + PT I +L + I ++ CG VSFA+ + G +Y WGMG
Sbjct: 329 IGRGDYGRLGLGPDVKECSHPTEIETLANSDIKAVTCGLAVSFAVSNSGDVYSWGMGTNL 388
Query: 375 QLGNGKEDDIL 385
QLG+ +DDIL
Sbjct: 389 QLGSSTDDDIL 399
>gi|313213144|emb|CBY37001.1| unnamed protein product [Oikopleura dioica]
gi|313227438|emb|CBY22585.1| unnamed protein product [Oikopleura dioica]
Length = 544
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 221/370 (59%), Gaps = 31/370 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGC 95
GV+L G GD GQLG G D+MERK ALV++LD ++ GGMH +C+ E G VYT+GC
Sbjct: 149 GVLLAFGTGDAGQLGCGEDIMERKKPALVKELDEPILCAAAGGMHNLCVGESGDVYTFGC 208
Query: 96 NDEGALGREAEGDSE-FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
NDEGALGRE + + E F+PQ V+ A+ AGDSHS L +DGTV+ WG+FRD++G M
Sbjct: 209 NDEGALGRETKEEEEAFLPQKVSGVSDAIYCCAGDSHSAVLTKDGTVWIWGTFRDANGRM 268
Query: 155 GLKG---------EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G + I K P LE IV+IASGADH ++L + G++ + GC E GQLG
Sbjct: 269 GATAGNTDDKEMSKAIIKEPAILEISKKIVRIASGADHLILLDTEGSVWSMGCAESGQLG 328
Query: 206 RITQRSASRNARRGMSFLEPGEV-----PLKRKH--IDDVFTGVYNTF-ISSKGSILAFG 257
RI+ + RRG+ + E+ KR H ++++ G +++F I S G++L FG
Sbjct: 329 RISSHFCQKGGRRGLGKILKAEMIFLNKKFKRVHGEVENIACGQFSSFLIMSSGAVLGFG 388
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDK--KFTMLASGQHHSLALNSEGKIYA 314
LNN Q+G D E++ ++P ++ DK + ++SG HHS+ L+ +G ++
Sbjct: 389 LNNCFQIGFKDREIR-------YSPEVVPYKFEDKPVEVKQISSGMHHSVLLSKDGDVFT 441
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQ-DKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
G DYGRLG+ E + E T + + DK I SI G+C ++A+ +G Y WGMG+
Sbjct: 442 IGCGDYGRLGVGE-KETLRESTVLRKVTIDKKIVSIGSGSCCTYAVAEDGSAYAWGMGSN 500
Query: 374 YQLGNGKEDD 383
QL NG E+D
Sbjct: 501 LQLTNGSEED 510
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 78/418 (18%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
E+G + A+G+ G +G GE I +K L E I+ A+G H + + G++
Sbjct: 147 ENGVLLAFGT--GDAGQLGC-GEDIMERKKPALVKELDEPILCAAAGGMHNLCVGESGDV 203
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISS 249
T GC ++G LGR T+ E +P K + D ++ ++
Sbjct: 204 YTFGCNDEGALGRETKEE------------EEAFLPQKVSGVSDAIYCCAGDSHSAVLTK 251
Query: 250 KGSILAFGL----NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
G++ +G N +++ ++ P +++ KK +ASG H +
Sbjct: 252 DGTVWIWGTFRDANGRMGATAGNTDDKEMSKAIIKEPAILEI--SKKIVRIASGADHLIL 309
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEP-----------TPIPSLQDK------TITS 348
L++EG +++ G + G+LG +S + + L K + +
Sbjct: 310 LDTEGSVWSMGCAESGQLG--RISSHFCQKGGRRGLGKILKAEMIFLNKKFKRVHGEVEN 367
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--------------EDD----------- 383
IACG SF I S G + G+G+ N +Q+G ED
Sbjct: 368 IACGQFSSFLIMSSGAVLGFGLNNCFQIGFKDREIRYSPEVVPYKFEDKPVEVKQISSGM 427
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ-DKTITSIACGNCVSFAI 438
+L+ +G ++ G DYGRLG+ E + E T + + DK I SI G+C ++A+
Sbjct: 428 HHSVLLSKDGDVFTIGCGDYGRLGVGE-KETLRESTVLRKVTIDKKIVSIGSGSCCTYAV 486
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G Y WGMG+ QL NG E+D EP+++ GKQ+ ++ ++ GGQH++I+ K
Sbjct: 487 AEDGSAYAWGMGSNLQLTNGSEEDEWEPVQVTGKQIEGQKIVSISGGGQHAIIVMDKK 544
>gi|242021219|ref|XP_002431043.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
gi|212516272|gb|EEB18305.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
Length = 369
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/321 (46%), Positives = 199/321 (61%), Gaps = 14/321 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG + ER +LV+ L+N+V+V GGMHTVCL++DG VYT+GC+
Sbjct: 41 GLVLTFGQGDVGQLGLGTSITERGKPSLVKTLENIVDVCAGGMHTVCLSKDGVVYTFGCD 100
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
DEGALGREA ++ F P V LP AVQI+AGDSHS ALL+DG V+AWGSFRDSHG+MGL
Sbjct: 101 DEGALGREATDENSFEPGQVCLPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAMGL 160
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+G +K P++L I KIASGADH VMLT G L T GC EQGQLGR++ R +SR +
Sbjct: 161 TVQGKEKRPIQLLQDKVITKIASGADHLVMLTFDGQLYTCGCAEQGQLGRVSNRFSSRES 220
Query: 217 RRGMS-FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R+G+S L PG + ++ D F + + G + G +Y +LG G
Sbjct: 221 RQGLSHLLLPGRILFNKRSKYD-FIDHHTMALDENGKVYVLGRKDYGRLG--------LG 271
Query: 276 NTCFFTPH--LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
C L+ +LS+ + T +A G S A+ G YA+G G+LG+ + +
Sbjct: 272 KNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMGSNGQLGMGDDDSDIF 331
Query: 334 EPTPI--PSLQDKTITSIACG 352
EP+ I L+ K + ++ G
Sbjct: 332 EPSKILGKQLEGKNVHLVSAG 352
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 151/344 (43%), Gaps = 67/344 (19%)
Query: 191 GNLLTAGCPEQGQLG---RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
G +LT G + GQLG IT+R +P V +D G++ +
Sbjct: 41 GLVLTFGQGDVGQLGLGTSITERG------------KPSLVKTLENIVDVCAGGMHTVCL 88
Query: 248 SSKGSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
S G + FG ++ LG D + G C + + +G HS A
Sbjct: 89 SKDGVVYTFGCDDEGALGREATDENSFEPGQVCLPGSAV----------QITAGDSHSAA 138
Query: 306 LNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
L +G+++A+G R +G +GL + E PI LQDK IT IA G + +G
Sbjct: 139 LLDDGRVFAWGSFRDSHGAMGLTVQGK---EKRPIQLLQDKVITKIASGADHLVMLTFDG 195
Query: 364 VLYGWGMGNGYQLGN----------------------------GKEDDI------LNSEG 389
LY G QLG K D I L+ G
Sbjct: 196 QLYTCGCAEQGQLGRVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFIDHHTMALDENG 255
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
K+Y GR DYGRLGL E E T + +L + T IACG+ VSFA+ G Y WGM
Sbjct: 256 KVYVLGRKDYGRLGLGKNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGM 315
Query: 450 GNGYQLGNGKED-DILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G+ QLG G +D DI EP KI GKQL V V++GGQH+V+L
Sbjct: 316 GSNGQLGMGDDDSDIFEPSKILGKQLEGKNVHLVSAGGQHTVLL 359
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 133/312 (42%), Gaps = 24/312 (7%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G V T+G D G LG P V + V + AG H+V L +DG VY +G
Sbjct: 41 GLVLTFGQGDVGQLGLGTSITERGKPSLVKTLENIVDVCAGGMHTVCLSKDGVVYTFGC- 99
Query: 148 RDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--PEQGQL 204
D G++G + P ++ V+I +G H L G + G G +
Sbjct: 100 -DDEGALGREATDENSFEPGQVCLPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAM 158
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
G Q R P ++ L+ K I + +G + ++ G + G Q
Sbjct: 159 GLTVQGKEKR----------PIQL-LQDKVITKIASGADHLVMLTFDGQLYTCGCAEQGQ 207
Query: 264 LGEAD----SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
LG S + G + P I K+ + HH++AL+ GK+Y GR D
Sbjct: 208 LGRVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFI---DHHTMALDENGKVYVLGRKD 264
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YGRLGL E E T + +L + T IACG+ VSFA+ G Y WGMG+ QLG G
Sbjct: 265 YGRLGLGKNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMGSNGQLGMG 324
Query: 380 KEDDILNSEGKI 391
+D + KI
Sbjct: 325 DDDSDIFEPSKI 336
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 34/169 (20%)
Query: 4 LLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
L KV+ K A V +T + G + TCG + GQLG V R F+
Sbjct: 173 LQDKVITKIASGADHLVMLTFD-----------GQLYTCGCAEQGQLG---RVSNR--FS 216
Query: 64 LVEDLDNVVEVVVGGM--------------HTVCLTEDGKVYTWGCNDEG--ALGREAEG 107
E + +++ G HT+ L E+GKVY G D G LG+ E
Sbjct: 217 SRESRQGLSHLLLPGRILFNKRSKYDFIDHHTMALDENGKVYVLGRKDYGRLGLGKNCED 276
Query: 108 DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
E + + I+ G S S A+ + G YAWG S+G +G+
Sbjct: 277 AKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWG--MGSNGQLGM 323
>gi|395730887|ref|XP_003780622.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation [Pongo abelii]
Length = 449
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 166/371 (44%), Positives = 227/371 (61%), Gaps = 34/371 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 111
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 112 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSR--GNLLTAGCPEQGQLGRITQRS 211
L E ++K+ P++++ +VK+ASG DH ++ NL T GC EQGQLGR+ +
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHXLVNADSLMVNLYTLGCGEQGQLGRVPELF 230
Query: 212 ASRNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
A+R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY Q
Sbjct: 231 ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQ 290
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKK------FTMLASGQHHSLALNSEGKIYAFGR 317
LG +E +CF T L + L+ K + + GQHH++ ++SEGK Y+ GR
Sbjct: 291 LGTPGTE------SCFDT-FLSEDLTSFKNSTKSCWVGFSGGQHHTVCMDSEGKAYSLGR 343
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI---ACGNCVSFAI--DSEGVLYGWGMGN 372
+YGR G E P+L + S+ G V +A+ D E V + WGMG
Sbjct: 344 AEYGRTG--PFGEGCXGERAYPTLISRLPCSLLQWLVGPLVGYAVTKDGEVVFFAWGMGT 401
Query: 373 GYQLGNGKEDD 383
YQLG G+++D
Sbjct: 402 NYQLGTGQDED 412
>gi|195174458|ref|XP_002027991.1| GL21413 [Drosophila persimilis]
gi|194115701|gb|EDW37744.1| GL21413 [Drosophila persimilis]
Length = 402
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 211/356 (59%), Gaps = 15/356 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL CG G TGQLGLG V++ +LV + N V++ GGMH++ LT+ G +Y++GCN
Sbjct: 20 GRVLVCGMGYTGQLGLGSLVLQLNRLSLVNRIPNPVDICAGGMHSLVLTQSGDIYSFGCN 79
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ D SE +P V+LP KA+ ISAGDSHS LLEDG+VYAWGSF SHGSMG
Sbjct: 80 DEGALGRDTSADGSESLPALVDLPGKALCISAGDSHSACLLEDGSVYAWGSFFHSHGSMG 139
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L + TP L + IASG+DH V+LT+ G + T GC E GQLGRI++RS +
Sbjct: 140 LNNDDNTSTPTNLLPGTVCCSIASGSDHLVILTTSGKVYTLGCAEYGQLGRISERSLPGD 199
Query: 216 ARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI----SSKGSILAFGLNNYSQLGEADS 269
RRG L P ++ +K K + ++ + TFI S G+I A GLN+ +QL A
Sbjct: 200 GRRGKQDLLRPDQIFIKHAKPFEAIWATDHGTFIRERTSQTGTIWAVGLNDSNQL--AHE 257
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
V + + + P +K++ +A G H+L L + K +A G ++G LGL +V
Sbjct: 258 TVSEPDHYNYPVPTKLKNIK-----QIAGGSEHTLLLLNNRKCFAVGSPEHGCLGLGDVK 312
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ V T + L D I + CG S+AID G LY WGMG+ QLG DD L
Sbjct: 313 DVVPILTRVKKLSDN-IVYVGCGKFCSYAIDDYGKLYSWGMGSNNQLGVNDGDDEL 367
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 107/276 (38%), Gaps = 59/276 (21%)
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
+D G+++ ++ G I +FG N+ LG S + P L+ L K
Sbjct: 55 VDICAGGMHSLVLTQSGDIYSFGCNDEGALGR-----DTSADGSESLPALV-DLPGKALC 108
Query: 295 MLASGQHHSLALNSEGKIYAFGR--HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+++G HS L +G +YA+G H +G +GL N T +P T+
Sbjct: 109 -ISAGDSHSACLLEDGSVYAWGSFFHSHGSMGLNNDDNTSTPTNLLPG----TV------ 157
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-------- 404
C S A S+ ++ IL + GK+Y G +YG+LG
Sbjct: 158 -CCSIASGSDHLV------------------ILTTSGKVYTLGCAEYGQLGRISERSLPG 198
Query: 405 --KNVSEPVTEPTPIPSLQDKTITSIAC---GNCVSFAIDSEGVLYGWGMGNGYQLGN-- 457
+ + + P I K +I G + G ++ G+ + QL +
Sbjct: 199 DGRRGKQDLLRPDQIFIKHAKPFEAIWATDHGTFIRERTSQTGTIWAVGLNDSNQLAHET 258
Query: 458 -GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ D P+ + K + Q+A G +H+++L
Sbjct: 259 VSEPDHYNYPVPTKLKNIK-----QIAGGSEHTLLL 289
>gi|260795414|ref|XP_002592700.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
gi|229277923|gb|EEN48711.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
Length = 392
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/327 (45%), Positives = 205/327 (62%), Gaps = 21/327 (6%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C+T GVVLT GQGDTGQLGLG DVMERK LV D V++V GGMHTV LT G+V+
Sbjct: 48 CRTVEGVVLTLGQGDTGQLGLGEDVMERKKPGLVAIQDKVIDVCAGGMHTVALTVKGEVW 107
Query: 92 TWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+WGCNDEGALGR+ +E +E +P V L K Q+ AGDSH++AL DG V+ WG+FRD+
Sbjct: 108 SWGCNDEGALGRDTSEIGTETVPGKVELGAKIAQLGAGDSHTIALTTDGRVWCWGTFRDN 167
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G GL +G +Q P+++ + ++KI+SG H LT G+L T GC EQGQLGRI +
Sbjct: 168 NGQFGLTSDGKVQPRPVEIPLPARVLKISSGVSHVACLTEDGDLYTFGCGEQGQLGRIAE 227
Query: 210 RSASRNARRGMSFL-EPGEVPLKRKH--------IDDVFTGVYNTFISS--KGSILAFGL 258
R R+G+S L +P V +K K DVF G +NTF S + + AFGL
Sbjct: 228 CFTVRGGRKGLSLLVDPALVRMKGKRGSGKSHMKFADVFCGSHNTFAISDDQEDVYAFGL 287
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
NNY Q+G G+T + P ++SLS K++T + +GQHH++AL+ +G+ Y++G
Sbjct: 288 NNYYQMG-------LEGDTARYVPEHVESLSGKRWTQIEAGQHHTVALSEDGEAYSWGMG 340
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKT 345
+LGL + + V PT + Q +T
Sbjct: 341 TNLQLGLSD-DDDVWVPTKMSGKQLET 366
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 154/358 (43%), Gaps = 66/358 (18%)
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
T G +LT G + GQLG M +PG V ++ K ID G++ +
Sbjct: 50 TVEGVVLTLGQGDTGQLGL---------GEDVMERKKPGLVAIQDKVIDVCAGGMHTVAL 100
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ KG + ++G N+ LG SE+ P ++ + K L +G H++AL
Sbjct: 101 TVKGEVWSWGCNDEGALGRDTSEIGTE-----TVPGKVELGA--KIAQLGAGDSHTIALT 153
Query: 308 SEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
++G+++ +G R + G+ GL S+ +P P+ + I+ G + +G L
Sbjct: 154 TDGRVWCWGTFRDNNGQFGL--TSDGKVQPRPVEIPLPARVLKISSGVSHVACLTEDGDL 211
Query: 366 YGWGMGNGYQLGN--------------------------GKEDD---------------- 383
Y +G G QLG GK
Sbjct: 212 YTFGCGEQGQLGRIAECFTVRGGRKGLSLLVDPALVRMKGKRGSGKSHMKFADVFCGSHN 271
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
I + + +YAFG ++Y ++GL+ + P + SL K T I G + A+
Sbjct: 272 TFAISDDQEDVYAFGLNNYYQMGLEGDTARYV-PEHVESLSGKRWTQIEAGQHHTVALSE 330
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
+G Y WGMG QLG +DD+ P K+ GKQL V+ V+ GGQH+V+LA+ K N
Sbjct: 331 DGEAYSWGMGTNLQLGLSDDDDVWVPTKMSGKQLETRDVVLVSGGGQHTVMLARDKDN 388
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 30/319 (9%)
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
C T +G V T G D G LG + P V + K + + AG H+VAL G V+
Sbjct: 48 CRTVEGVVLTLGQGDTGQLGLGEDVMERKKPGLVAIQDKVIDVCAGGMHTVALTVKGEVW 107
Query: 143 AWGSFRDSHGSMGLKGE--GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC-- 198
+WG + G++G G + P K+E + I ++ +G H + LT+ G + G
Sbjct: 108 SWGC--NDEGALGRDTSEIGTETVPGKVELGAKIAQLGAGDSHTIALTTDGRVWCWGTFR 165
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFG 257
GQ G + G P E+PL + + + +GV + ++ G + FG
Sbjct: 166 DNNGQFGLTSD---------GKVQPRPVEIPLPARVLK-ISSGVSHVACLTEDGDLYTFG 215
Query: 258 LNNYSQLGEADSEVQ----KSGNTCFFTPHLIK-------SLSDKKFTMLASGQHHSLAL 306
QLG + G + P L++ S KF + G H++ A+
Sbjct: 216 CGEQGQLGRIAECFTVRGGRKGLSLLVDPALVRMKGKRGSGKSHMKFADVFCGSHNTFAI 275
Query: 307 NSEGK-IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ + + +YAFG ++Y ++GL+ + P + SL K T I G + A+ +G
Sbjct: 276 SDDQEDVYAFGLNNYYQMGLEGDTARYV-PEHVESLSGKRWTQIEAGQHHTVALSEDGEA 334
Query: 366 YGWGMGNGYQLGNGKEDDI 384
Y WGMG QLG +DD+
Sbjct: 335 YSWGMGTNLQLGLSDDDDV 353
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 7 KVLRKQAENP-SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVME----RKT 61
KV + E P +V S V + C T G + T G G+ GQLG + RK
Sbjct: 178 KVQPRPVEIPLPARVLKISSGVSHVACLTEDGDLYTFGCGEQGQLGRIAECFTVRGGRKG 237
Query: 62 FALVEDLDNV---------------VEVVVGGMHTVCLTEDGK-VYTWGCNDEGALGREA 105
+L+ D V +V G +T +++D + VY +G N+ +G E
Sbjct: 238 LSLLVDPALVRMKGKRGSGKSHMKFADVFCGSHNTFAISDDQEDVYAFGLNNYYQMGLEG 297
Query: 106 EGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK 163
+ + ++P+ V K+ QI AG H+VAL EDG Y+WG ++ +GL +
Sbjct: 298 D-TARYVPEHVESLSGKRWTQIEAGQHHTVALSEDGEAYSWG--MGTNLQLGLSDDDDVW 354
Query: 164 TPLKLE----SVSGIVKIASGADHFVML 187
P K+ +V ++ G H VML
Sbjct: 355 VPTKMSGKQLETRDVVLVSGGGQHTVML 382
>gi|391339176|ref|XP_003743928.1| PREDICTED: regulator of chromosome condensation-like [Metaseiulus
occidentalis]
Length = 669
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 226/370 (61%), Gaps = 17/370 (4%)
Query: 28 PTLKCKTGGGVVLTC--GQGDTGQLGLGPDVMERKT-FALVEDLD-NVVEVVVGGMHTVC 83
PT++ T G ++C G G+ GQLG+G K+ F + D+ VV GGMH++
Sbjct: 264 PTIETPTVEGNTVSCSAGDGEVGQLGIGEQGENGKSRFVAIGDVPGKVVRCAAGGMHSLL 323
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSE-FIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
LTE G+++++GCND+G+LGR E + + F+P+ L + +++AG+ HSVA+ + V+
Sbjct: 324 LTEKGEIFSFGCNDDGSLGRPTENEEDCFVPKLTPLSEPVAKLAAGNIHSVAITQYSKVF 383
Query: 143 AWGSFRDSHGSMGLK--GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
WGS+RD++G+ G++ G+ K P +L+ IV +A G++H ++L+++GN+ + G E
Sbjct: 384 IWGSYRDNNGAFGIQPDGDAPLKQPTELKVPETIVDVACGSEHTLLLSNKGNIFSMGVGE 443
Query: 201 QGQLGRITQRSASRNARRG-MSFLEPGEVPLKRKHI--DDVFTGVYNTFIS-SKGSILAF 256
QG+LGR+ R RR + L P VP++++ + D V+ G YN+F + G+I
Sbjct: 444 QGRLGRLKSSHCGRENRRARQTLLTPVIVPVRKRKMRFDRVWAGRYNSFARCTDGTIWGC 503
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
GLNNY QLGE D++ + N FF L KK+ ++ G+ H+LAL++EG +Y+ G
Sbjct: 504 GLNNYGQLGELDAKSMED-NFVFFLTELKSFDPAKKWEQISGGEQHTLALDAEGSVYSMG 562
Query: 317 RHDYGRLGL--KNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
R YGRLGL K+ ++P + +PT IP L+ K T IA G+ SFA+D EG L+ WG G
Sbjct: 563 RVLYGRLGLGKKDANDPDIKKPTLIPELE-KKCTMIAAGDHTSFALDKEGQLWSWGQGTN 621
Query: 374 YQLGNGKEDD 383
LG G DD
Sbjct: 622 L-LGQGSRDD 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 203/450 (45%), Gaps = 82/450 (18%)
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
V G C DG+V G ++G G+ S F+ ++P K V+ +AG HS+
Sbjct: 270 TVEGNTVSCSAGDGEVGQLGIGEQGENGK-----SRFV-AIGDVPGKVVRCAAGGMHSLL 323
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQK------TPLKLESVSGIVKIASGADHFVMLT 188
L E G ++++G D GS+G E + TPL + K+A+G H V +T
Sbjct: 324 LTEKGEIFSFGCNDD--GSLGRPTENEEDCFVPKLTPLS----EPVAKLAAGNIHSVAIT 377
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP-GEVPLKR-------KHIDDVFT 240
+ G S G ++P G+ PLK+ + I DV
Sbjct: 378 QYSKVFIWG---------------SYRDNNGAFGIQPDGDAPLKQPTELKVPETIVDVAC 422
Query: 241 GVYNTFI-SSKGSILAFGLNNYSQLGEADS----EVQKSGNTCFFTPHLIKSLSDK-KFT 294
G +T + S+KG+I + G+ +LG S + TP ++ K +F
Sbjct: 423 GSEHTLLLSNKGNIFSMGVGEQGRLGRLKSSHCGRENRRARQTLLTPVIVPVRKRKMRFD 482
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ +G+++S A ++G I+ G ++YG+LG + S++D N
Sbjct: 483 RVWAGRYNSFARCTDGTIWGCGLNNYGQLGELDAK----------SMED---------NF 523
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL--NSEGKIYAFGRHDYGRLGL--KNVSEP 410
V F + L + ++ +G E L ++EG +Y+ GR YGRLGL K+ ++P
Sbjct: 524 VFFLTE----LKSFDPAKKWEQISGGEQHTLALDAEGSVYSMGRVLYGRLGLGKKDANDP 579
Query: 411 -VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-----DIL 464
+ +PT IP L+ K T IA G+ SFA+D EG L+ WG G LG G D D+
Sbjct: 580 DIKKPTLIPELE-KKCTMIAAGDHTSFALDKEGQLWSWGQGTNL-LGQGSRDDADTMDVF 637
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P K L + V+ V++G H++ + K
Sbjct: 638 TPTICTSKALREHKVVFVSAGSNHALCVVK 667
>gi|320169612|gb|EFW46511.1| Rcc1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 481
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 212/371 (57%), Gaps = 32/371 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G V T G+GD GQLGLG ++ RK + ++NV V + GG+HTV +T G+VY+WG
Sbjct: 66 GSVFTVGEGDAGQLGLGEEITSRKKPTPLRSIENVPIVRMAAGGVHTVAITAKGQVYSWG 125
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
CNDEGALGR E + + + + V ++ GDSH+ L + G VY WG++RDS G M
Sbjct: 126 CNDEGALGRSGEEAEPALVKGLIENEFIVAVTCGDSHTNVLSDKGVVYGWGTYRDSAGRM 185
Query: 155 G------LKGEGIQKTPLKLESV---------SGIVKIASGADHFVMLTSRGNLLTAGCP 199
G K G K ++ E +V+I++ +H + LT +GN++T GC
Sbjct: 186 GFDFDTLFKEGGADKATVQFEPKVVLDYTAKHDRVVRISASNNHTIALTEKGNIVTWGCG 245
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI--DDVFTGVYNTFI-SSKGSILAF 256
E GQLGR+ R + R+ + + L P V ++RK DVFTG + +F+ +++AF
Sbjct: 246 EHGQLGRVGSRMSDRS--KHLHMLGPAPVLIRRKKAAPKDVFTGGFQSFVLFDDDTVVAF 303
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
GLNNY Q G D + P + +LS ++ + G+HH+LAL ++G + +FG
Sbjct: 304 GLNNYYQCGIPDVA------DPIYAPTEVPALSGRQVVSIKGGEHHTLALLADGSVLSFG 357
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSL--QDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNG 373
R DYGRLG N +E +++P I SL D+ I IA G VS+A+ + G +Y WGMG+
Sbjct: 358 RGDYGRLGHGNNNE-LSQPVKIDSLGPSDQVHIDKIATGGIVSYALSNHGEVYAWGMGSN 416
Query: 374 YQLGNGKEDDI 384
YQL G +DD+
Sbjct: 417 YQLALGPDDDM 427
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 43/205 (20%)
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
+A G ++ G D G+LGL +PTP+ S+++ I +A G + AI ++G
Sbjct: 60 IAALPAGSVFTVGEGDAGQLGLGEEITSRKKPTPLRSIENVPIVRMAAGGVHTVAITAKG 119
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL-QD 422
+Y WG N EG + GR G + EP + L ++
Sbjct: 120 QVYSWG---------------CNDEGAL--------GRSGEE------AEPALVKGLIEN 150
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL--------EPMKIEGKQL 474
+ I ++ CG+ + + +GV+YGWG G + D L ++ E K +
Sbjct: 151 EFIVAVTCGDSHTNVLSDKGVVYGWGTYRDSAGRMGFDFDTLFKEGGADKATVQFEPKVV 210
Query: 475 NNYT-----VLQVASGGQHSVILAK 494
+YT V+++++ H++ L +
Sbjct: 211 LDYTAKHDRVVRISASNNHTIALTE 235
>gi|355562421|gb|EHH19015.1| hypothetical protein EGK_19636 [Macaca mulatta]
Length = 378
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 199/349 (57%), Gaps = 63/349 (18%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCND
Sbjct: 53 LVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCND 112
Query: 98 EGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EGALGR+ + SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSF D++G +GL
Sbjct: 113 EGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGHVFLWGSFWDNNGVIGL 172
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
E ++K+ + ++ VML SRG SR
Sbjct: 173 L-EPMKKSMVPVQC--------------VMLKSRG---------------------SRGH 196
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R D F G Y TF IS +G + FGL+NY QLG D+E
Sbjct: 197 VR----------------FQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPDTE----- 235
Query: 276 NTCFFTPHLIK-SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
+CF +L S K + + GQHH++ ++SEGK Y+ G+ +YGRLGL +E +
Sbjct: 236 -SCFILQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGQAEYGRLGLGEGAEEKSI 294
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 295 PTLISRL--PAVSSVACGASVGYAVTKDGCVFAWGMGTNYQLGTGQDED 341
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 47/314 (14%)
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
M +P V + + G++ +S G + +FG N+ LG D+ V+ S
Sbjct: 72 MERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---- 126
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP-TPI 338
P ++ +K +++G H+ AL +G ++ +G + G+ + EP+ + P+
Sbjct: 127 MIPGKVEL--QEKVVQVSAGDSHTAALTEDGHVFLWGSF-WDNNGVIGLLEPMKKSMVPV 183
Query: 339 PSLQDKT--------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
+ K+ CG +FAI EG +YG+G+ N +QLG
Sbjct: 184 QCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPDTESCFILQNL 243
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ + ++SEGK Y+ G+ +YGRLGL +E + PT I L
Sbjct: 244 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGQAEYGRLGLGEGAEEKSIPTLISRL-- 301
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V
Sbjct: 302 PAVSSVACGASVGYAVTKDGCVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSV 361
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 362 SSGGQHTVLLVKDK 375
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + GQ + G+LGLG E+ L+ L V V G +T+DG V+
Sbjct: 265 CMDSEGKAYSLGQAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGCVF 324
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 325 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 374
>gi|256085223|ref|XP_002578822.1| regulator of chromosome condensation [Schistosoma mansoni]
gi|350645003|emb|CCD60286.1| regulator of chromosome condensation, putative [Schistosoma
mansoni]
Length = 767
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 240/533 (45%), Gaps = 112/533 (21%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVE-------------DLDNVVEVVVGGMHTVC 83
G L G GDTGQLGLGPDV ER AL ++ GGMH+VC
Sbjct: 72 GTALFLGVGDTGQLGLGPDVTERSRPALPSATSLNALQTTKENSFSYFTQICCGGMHSVC 131
Query: 84 LTEDGKVYTWGCNDEGALGR--------------EAEGDSEFIPQT----VNLPKKA--V 123
LT +G V T GCNDEGALGR + G + + + P K V
Sbjct: 132 LTTNGTVATCGCNDEGALGRPTGTESGSCDLSSCDHNGSYPIVDECHLGLIPFPTKVKIV 191
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-----------------------KGEG 160
+SAGDSH+ AL +G V+ WG+FR + G +GL +G
Sbjct: 192 MVSAGDSHTAALDTNGQVWLWGTFRGASGPIGLTQPGEICTTPRLLLAYAMNSSTENNDG 251
Query: 161 IQKTPLKLESVS----------GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+ KL S S +VKIASG DH V LT G L T GC EQGQLGR+ +R
Sbjct: 252 VSNNDSKLSSRSINTALLTPSTHVVKIASGQDHLVCLTDEGRLYTMGCGEQGQLGRVAER 311
Query: 211 SASRNARRGMS-FLEPGEVPLKRK-HIDDVFTGVYNTFISSK--GSILAFGLNNYSQLGE 266
A R G+S L+P E ++ DV+ G + TF + G+I A GLNNY QL
Sbjct: 312 FAKDGGRSGISSLLQPTECRVRGAVRFSDVWAGGFATFARCQMTGAIYACGLNNYGQLAL 371
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
D+ +C T + D +A N+E + D L
Sbjct: 372 RDTTGHGKSLSCNSTEEFVDIELD-------------MAENAEKLVTDRQEADRSEAQLI 418
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
P+ + I +F D + + +G + L LN
Sbjct: 419 ARQGPLIQFMLI----------------RAFGFDPDQDWRQFAIGMHHTLA-------LN 455
Query: 387 SEGKIYAFGRHDYGRLGL----KNVSEPVTEPTPIPSLQDKTITS-IACGNCVSFAIDSE 441
G +YA GR DYGRLGL K V +PT + ++ + S I CG SFA+D++
Sbjct: 456 HLGHVYAVGRPDYGRLGLGCDLKGSKISVNKPTRVLGALNECVCSWIGCGEVCSFAVDTK 515
Query: 442 GVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G Y WGMG+ +QLG+G EDD EP + GKQL + VL + +GGQH+V+LA
Sbjct: 516 GRAYSWGMGSNHQLGHGDSEDDCWEPELMVGKQLEDRRVLMIDAGGQHTVMLA 568
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 108/304 (35%), Gaps = 39/304 (12%)
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK-HIDDVFTGVYNTFIS 248
R + ++G P + + IT S R R+ + P P + H + V T
Sbjct: 13 RDTVKSSGVPVRQKRSSITFDSGLRKRRKFETSGGPHSPPSQLSGHTKQIRNNVTTTV-- 70
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKS-----GNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
G+ L G+ + QLG ++S T K S FT + G HS
Sbjct: 71 -PGTALFLGVGDTGQLGLGPDVTERSRPALPSATSLNALQTTKENSFSYFTQICCGGMHS 129
Query: 304 LALNSEGKIYAFGRHDYGRLGL---------------KNVSEPVTEPTP---IPSLQDKT 345
+ L + G + G +D G LG N S P+ + IP
Sbjct: 130 VCLTTNGTVATCGCNDEGALGRPTGTESGSCDLSSCDHNGSYPIVDECHLGLIPFPTKVK 189
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--LGNGKEDDILNSEGKI--YAFGRHDYGR 401
I ++ G+ + A+D+ G ++ WG G +G + +I + + YA
Sbjct: 190 IVMVSAGDSHTAALDTNGQVWLWGTFRGASGPIGLTQPGEICTTPRLLLAYAMNSSTENN 249
Query: 402 LGLKN-----VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G+ N S + PS + IA G + EG LY G G QLG
Sbjct: 250 DGVSNNDSKLSSRSINTALLTPSTH---VVKIASGQDHLVCLTDEGRLYTMGCGEQGQLG 306
Query: 457 NGKE 460
E
Sbjct: 307 RVAE 310
>gi|358337819|dbj|GAA56144.1| regulator of chromosome condensation [Clonorchis sinensis]
Length = 843
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 218/480 (45%), Gaps = 133/480 (27%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKT---FALV---------EDLDNVV-EVVVGGMHTVC 83
G+ L G GDTGQLGLGPD+ ER F+ +DL+++ ++ GGMHTVC
Sbjct: 66 GLALLFGVGDTGQLGLGPDITERSRPCRFSKASLTALGIGDQDLESLTTQICAGGMHTVC 125
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQT---------------------------- 115
LT G+V T GCNDEGALGR DSE P T
Sbjct: 126 LTGAGRVITCGCNDEGALGRNVLSDSELQPPTKKPHIDGKESGHQDSDVPDLLAEETYPA 185
Query: 116 -VNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---------------- 156
V LP K +SAGDSH+ AL +G V+ WG+FR + G +GL
Sbjct: 186 YVPLPPSVKICMVSAGDSHTAALDSEGQVWLWGTFRGASGPIGLTEAGEISQIPKRLFPL 245
Query: 157 --------KGEGIQKTPLKLESVSG--------IVKIASGADHFVMLTSRGNLLTAGCPE 200
K G + P+ +VS +VKIASG DH V LT G L T GC E
Sbjct: 246 ISSAPATDKAPGSEVKPVPSSAVSSLHMGMGARVVKIASGQDHLVCLTDEGRLYTMGCGE 305
Query: 201 QGQLGRITQRSASRNARRGMS-FLEPGEVPLKRK-HIDDVFTGVYNTF--ISSKGSILAF 256
QGQLGRI +R A R GMS L P E ++ D + G + TF + G+I A
Sbjct: 306 QGQLGRIAERFARTGGRHGMSALLSPAECRVRGAVRFSDAWAGGFATFARCQATGTIYAC 365
Query: 257 GLNNYSQL----------GEAD-----------------------------SEVQKSGNT 277
GLNNY QL G+AD +EV KS
Sbjct: 366 GLNNYGQLGLKKASAVVNGDADENDEATIDGGLGEEGDEMDVDAARLITDQNEVDKSEAA 425
Query: 278 CFFTP-HLIKSL--------SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
LI+ + D+ + A G HH+LAL+ G +YA GR DYGRLGL
Sbjct: 426 LLARQGPLIQFMLTKAHGFSRDRNWRQFAVGMHHTLALDGLGHVYAVGRPDYGRLGLGKP 485
Query: 329 SEPVTEPTPIPS-----LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ P PS L D+T + + CG SFA+D+ GV Y WGMG+ QLG+G + D
Sbjct: 486 AASSHLSVPQPSRVHGLLSDRTCSWVGCGEACSFAVDTSGVAYSWGMGSNKQLGHGDDGD 545
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 134/368 (36%), Gaps = 113/368 (30%)
Query: 113 PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
P + ++P A+ GD+ + L D T + R S S+ G G Q LES++
Sbjct: 59 PVSFSVPGLALLFGVGDTGQLGLGPDITERSR-PCRFSKASLTALGIGDQD----LESLT 113
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
+I +G H V LT G ++T GC ++G LGR S L+P P K+
Sbjct: 114 --TQICAGGMHTVCLTGAGRVITCGCNDEGALGRNVLSD---------SELQP---PTKK 159
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
HID + G DS+V + P + K
Sbjct: 160 PHIDG------------------------KESGHQDSDVPDLLAEETY-PAYVPLPPSVK 194
Query: 293 FTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSE-------------------- 330
M+++G H+ AL+SEG+++ +G R G +GL E
Sbjct: 195 ICMVSAGDSHTAALDSEGQVWLWGTFRGASGPIGLTEAGEISQIPKRLFPLISSAPATDK 254
Query: 331 -PVTEPTPIPSLQDKT--------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
P +E P+PS + + IA G + EG LY G G QLG E
Sbjct: 255 APGSEVKPVPSSAVSSLHMGMGARVVKIASGQDHLVCLTDEGRLYTMGCGEQGQLGRIAE 314
Query: 382 -----------DDILN---------------------------SEGKIYAFGRHDYGRLG 403
+L+ + G IYA G ++YG+LG
Sbjct: 315 RFARTGGRHGMSALLSPAECRVRGAVRFSDAWAGGFATFARCQATGTIYACGLNNYGQLG 374
Query: 404 LKNVSEPV 411
LK S V
Sbjct: 375 LKKASAVV 382
>gi|340370015|ref|XP_003383542.1| PREDICTED: regulator of chromosome condensation-like [Amphimedon
queenslandica]
Length = 440
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 207/377 (54%), Gaps = 45/377 (11%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG 99
G G+ GQLGLG DV+ERK V + +++VV GG+HTV L + G+V+TWGCNDEG
Sbjct: 44 GMGELGQLGLGEDVIERKKATPVGGVLKGKKILQVVCGGIHTVALLDGGEVFTWGCNDEG 103
Query: 100 ALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
ALGR E+ P V K Q+SAGD H+ AL ++G VY WG FRD+ G +GL
Sbjct: 104 ALGRSVSTTDEYTPGVVKKLKGFNITQVSAGDCHTAALTDNGHVYCWGVFRDADGPLGLV 163
Query: 158 GEGIQKTP--LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ P + + + +K+ SG++H V+LT G++ + GC + GQLGR+ + ++R
Sbjct: 164 NSKPEFEPELVYSSAFNKAIKVTSGSNHIVILTEHGDIYSFGCGDSGQLGRVPECFSTRG 223
Query: 216 ARRGMSF-LEPGEVPLKRK--------------HIDDVFTGVYNTFI--SSKGSILAFGL 258
RRG+ + L P V +K I DV+ G + +F S I +GL
Sbjct: 224 GRRGIGYLLAPQIVRFPKKGRRLTGKAGATKSFKISDVYAGEHCSFAIGSEDRQIYVWGL 283
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLI---------KSLSDKKFTMLASGQHHSLALNSE 309
N+ QLG D E + F P + KS K ++A G HSL N +
Sbjct: 284 NHRGQLGLGDQESR-------FVPEKVPEDWLWDWAKSSKQDKQLLIAGGGSHSLVCN-D 335
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G +Y+ G ++YG+LGLK + E ++PT + + D +T IACG SFA+ +G ++ WG
Sbjct: 336 GHLYSMGANEYGQLGLKQI-EMTSKPTKLSGISD--VTDIACGGRCSFAVTKDGKVFSWG 392
Query: 370 MGNGYQLGNG-KEDDIL 385
+G+ YQLG G EDD+
Sbjct: 393 IGSNYQLGCGLDEDDVF 409
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 171/380 (45%), Gaps = 80/380 (21%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
I+++ G H V L G + T GC ++G LGR + PG V LK
Sbjct: 75 ILQVVCGGIHTVALLDGGEVFTWGCNDEGALGRSVSTTDEYT---------PGVVKKLKG 125
Query: 233 KHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+I V G + ++ G + +G+ +AD + + F P L+ S +
Sbjct: 126 FNITQVSAGDCHTAALTDNGHVYCWGV-----FRDADGPLGLVNSKPEFEPELVYSSAFN 180
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEP--VTEP 335
K + SG +H + L G IY+FG D G+LG + + P V P
Sbjct: 181 KAIKVTSGSNHIVILTEHGDIYSFGCGDSGQLGRVPECFSTRGGRRGIGYLLAPQIVRFP 240
Query: 336 TPIPSLQDKT-------ITSIACGNCVSFAIDSEGV-LYGWGMGNGYQLGNGKEDD---- 383
L K I+ + G SFAI SE +Y WG+ + QLG G ++
Sbjct: 241 KKGRRLTGKAGATKSFKISDVYAGEHCSFAIGSEDRQIYVWGLNHRGQLGLGDQESRFVP 300
Query: 384 ------------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
++ ++G +Y+ G ++YG+LGLK + E ++
Sbjct: 301 EKVPEDWLWDWAKSSKQDKQLLIAGGGSHSLVCNDGHLYSMGANEYGQLGLKQI-EMTSK 359
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGK 472
PT + + D +T IACG SFA+ +G ++ WG+G+ YQLG G EDD+ EP + GK
Sbjct: 360 PTKLSGISD--VTDIACGGRCSFAVTKDGKVFSWGIGSNYQLGCGLDEDDVFEPTPMVGK 417
Query: 473 QLNNYTVLQVASGGQHSVIL 492
+ N VL+V+SGGQH+ +L
Sbjct: 418 HVEN--VLKVSSGGQHTSLL 435
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + + G + GQLGL M K L + +V ++ GG + +T+DGKV++WG
Sbjct: 336 GHLYSMGANEYGQLGLKQIEMTSKPTKL-SGISDVTDIACGGRCSFAVTKDGKVFSWGIG 394
Query: 97 DEGALGREAEGDSEFIPQTV--NLPKKAVQISAGDSHSVALLE 137
LG + D F P + + +++S+G H+ L++
Sbjct: 395 SNYQLGCGLDEDDVFEPTPMVGKHVENVLKVSSGGQHTSLLVD 437
>gi|198463144|ref|XP_002135445.1| GA28548 [Drosophila pseudoobscura pseudoobscura]
gi|198151131|gb|EDY74072.1| GA28548 [Drosophila pseudoobscura pseudoobscura]
Length = 338
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 182/309 (58%), Gaps = 15/309 (4%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
LT+ G +Y++GCNDEGALGR+ D SE +P V+LP KA+ ISAGDSHS LLEDG+VY
Sbjct: 3 LTQSGDIYSFGCNDEGALGRDTSADGSESLPALVDLPGKALCISAGDSHSACLLEDGSVY 62
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
AWGSF SHGSMGL + TP L + IASG+DH V+LT+ G + T GC E G
Sbjct: 63 AWGSFFHSHGSMGLNNDDNTSTPTNLLPGTVCCSIASGSDHLVILTTSGKVYTLGCAEYG 122
Query: 203 QLGRITQRSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI----SSKGSILAF 256
QLGRI++RS + RRG FL P ++ +K K + ++ + TFI S G+I A
Sbjct: 123 QLGRISERSLPGDGRRGKQDFLRPDQIFIKHAKPFEAIWATDHGTFIRERTSQTGTIWAV 182
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
GLN+ +QL A V + + + P +K++ +A G H+L L + K +A G
Sbjct: 183 GLNDSNQL--AHETVSEPDHYNYPVPTKLKNIK-----QIAGGCEHTLLLLNNRKCFAVG 235
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++G LGL +V + V T + L D I + CG S+AID G LY WGMG+ QL
Sbjct: 236 SPEHGCLGLGDVKDVVPILTRVKKLSDN-IVYVGCGKFCSYAIDDYGKLYSWGMGSNNQL 294
Query: 377 GNGKEDDIL 385
G DD L
Sbjct: 295 GVNDGDDEL 303
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 154/376 (40%), Gaps = 51/376 (13%)
Query: 133 VALLEDGTVYAWGSFRDSHGSMG--LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
+ L + G +Y++G + G++G +G + P ++ + I++G H L
Sbjct: 1 MVLTQSGDIYSFGC--NDEGALGRDTSADGSESLPALVDLPGKALCISAGDSHSACLLED 58
Query: 191 GNLLTAGC--PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
G++ G G +G + S L PG V D + ++
Sbjct: 59 GSVYAWGSFFHSHGSMGLNNDDNTSTPTN-----LLPGTVCCSIASGSD-----HLVILT 108
Query: 249 SKGSILAFGLNNYSQLGEADSEVQ----KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ G + G Y QLG + G F P I K F + + H +
Sbjct: 109 TSGKVYTLGCAEYGQLGRISERSLPGDGRRGKQDFLRPDQIFIKHAKPFEAIWATDHGTF 168
Query: 305 A---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+ G I+A G +D +L + VSEP P+P+ + K I IA G C
Sbjct: 169 IRERTSQTGTIWAVGLNDSNQLAHETVSEPDHYNYPVPT-KLKNIKQIA-GGC------- 219
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
E L +LN+ K +A G ++G LGL +V + V T + L
Sbjct: 220 EHTLL-----------------LLNNR-KCFAVGSPEHGCLGLGDVKDVVPILTRVKKLS 261
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I + CG S+AID G LY WGMG+ QLG DD LEP+ + K + N +L
Sbjct: 262 DN-IVYVGCGKFCSYAIDDYGKLYSWGMGSNNQLGVNDGDDELEPVLVSSKHMQNKKILL 320
Query: 482 VASGGQHSVILAKPKP 497
+ G +HS+ L + P
Sbjct: 321 ASGGEKHSLFLVEADP 336
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 40/254 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE---------GDSEFIPQTVNLPKKAVQ 124
+ G H V LT GKVYT GC + G LGR +E G +F+ K A
Sbjct: 97 IASGSDHLVILTTSGKVYTLGCAEYGQLGRISERSLPGDGRRGKQDFLRPDQIFIKHAKP 156
Query: 125 ISA--GDSHSVALLE----DGTVYAWG---SFRDSHGSMGLKGEGIQKTPLKLESVSGIV 175
A H + E GT++A G S + +H ++ P KL+++
Sbjct: 157 FEAIWATDHGTFIRERTSQTGTIWAVGLNDSNQLAHETVSEPDHYNYPVPTKLKNIK--- 213
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+IA G +H ++L + G PE G LG + R V +I
Sbjct: 214 QIAGGCEHTLLLLNNRKCFAVGSPEHGCLGLGDVKDVVPILTR---------VKKLSDNI 264
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI--KSLSDKK 292
V G + ++ I G + ++G+ + +QLG D + + P L+ K + +KK
Sbjct: 265 VYVGCGKFCSYAIDDYGKLYSWGMGSNNQLGVNDGDDE-------LEPVLVSSKHMQNKK 317
Query: 293 FTMLASGQHHSLAL 306
+ + G+ HSL L
Sbjct: 318 ILLASGGEKHSLFL 331
>gi|384251521|gb|EIE24998.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 856
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 203/382 (53%), Gaps = 49/382 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGC 95
G + G+GD GQLG G DV + A VV+V GGMH+V LT +G+V+T G
Sbjct: 147 GEMFVLGEGDCGQLGKGEDVADAPRPAPSPIPGKLVVQVAAGGMHSVALTPEGEVWTTGV 206
Query: 96 NDEGALGREAEGDSEFIPQT---------------VNLPK---KAVQISAGDSHSVALLE 137
NDEGALGRE G E Q+ V++P K VQISAGDSH+VAL +
Sbjct: 207 NDEGALGRETGG--ELWEQSGLAKGNASDANTWGPVSIPSTHCKVVQISAGDSHTVALTQ 264
Query: 138 DGTVYAWGSFRDSHGSMGLK-GEGIQKTP-LKLESVSG---IVKIASGADHFVMLTSRGN 192
G ++AWG+FRDS G +G E I P L E V+ +KIASGADH + LT G
Sbjct: 265 QGAIWAWGTFRDSSGVLGFSPSERIALLPTLVHEPVTADEQALKIASGADHVMALTRGGA 324
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK-------HIDDVFTGVYNT 245
L++ G +QGQLGR+ R RN + + L P +P R+ ++D G Y++
Sbjct: 325 LMSWGNGQQGQLGRVGSR--MRNLKD--TLLRPHPIPFTRRIRNIGVAKVEDFACGTYSS 380
Query: 246 F-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
F +++ G + A+GLNNY QL G P L+K+L ++ T++ GQHH+L
Sbjct: 381 FALAAGGHVFAWGLNNYGQLA-------LPGQVPVPGPVLVKALEGREVTLVRPGQHHTL 433
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
L ++G++ + GR YGRLG ++ E V EP + I +A G VS A D
Sbjct: 434 FLTAQGELLSAGRPTYGRLGRAGLNIASDEAVPEPGTVEIENAGGIVGLAAGLAVSGAFD 493
Query: 361 SEGVLYGWGMGNGYQLGNGKED 382
G + WG G QLG G +D
Sbjct: 494 GSGKAWMWGFGTNSQLGKGNDD 515
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 178/401 (44%), Gaps = 64/401 (15%)
Query: 152 GSMGLKGEGIQKTPLKLES-VSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +G KGE + P S + G +V++A+G H V LT G + T G ++G LGR T
Sbjct: 158 GQLG-KGEDVADAPRPAPSPIPGKLVVQVAAGGMHSVALTPEGEVWTTGVNDEGALGRET 216
Query: 209 ------QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
Q ++ + P +P + + G +T ++ +G+I A+G
Sbjct: 217 GGELWEQSGLAKGNASDANTWGPVSIPSTHCKVVQISAGDSHTVALTQQGAIWAWGTFRD 276
Query: 262 SQ--LGEADSEVQKSGNTCFFTPHLIKS--LSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
S LG + SE P L+ +D++ +ASG H +AL G + ++G
Sbjct: 277 SSGVLGFSPSE------RIALLPTLVHEPVTADEQALKIASGADHVMALTRGGALMSWGN 330
Query: 318 HDYGRLG-----LKNVSEPVTEPTPIP------SLQDKTITSIACGNCVSFAIDSEGVLY 366
G+LG ++N+ + + P PIP ++ + ACG SFA+ + G ++
Sbjct: 331 GQQGQLGRVGSRMRNLKDTLLRPHPIPFTRRIRNIGVAKVEDFACGTYSSFALAAGGHVF 390
Query: 367 GWGMGNGYQLG----------------NGKEDDI----------LNSEGKIYAFGRHDYG 400
WG+ N QL G+E + L ++G++ + GR YG
Sbjct: 391 AWGLNNYGQLALPGQVPVPGPVLVKALEGREVTLVRPGQHHTLFLTAQGELLSAGRPTYG 450
Query: 401 RLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
RLG ++ E V EP + I +A G VS A D G + WG G QLG
Sbjct: 451 RLGRAGLNIASDEAVPEPGTVEIENAGGIVGLAAGLAVSGAFDGSGKAWMWGFGTNSQLG 510
Query: 457 NGKE--DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
G + D+ L M E K+ + V+Q+ GGQH+++L P
Sbjct: 511 KGNDDGDEELPHMLAETKRFSGRKVVQLEFGGQHALLLTVP 551
>gi|167534172|ref|XP_001748764.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772726|gb|EDQ86374.1| predicted protein [Monosiga brevicollis MX1]
Length = 476
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 207/396 (52%), Gaps = 50/396 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED--LDNVV--EVVVGGMHTVCLTEDGKVYT 92
G L G GQLG+G + ERK A V L+NV+ +V GGMHT + E +V+T
Sbjct: 50 GHCLAVGINCFGQLGVGDHITERKKPAFVRKGTLENVLVTDVAAGGMHTAVVDEQHRVHT 109
Query: 93 WGCNDEGALGREAEGDSEF----IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+GCNDEGALGR A + E + Q ++ KA+Q++AGDSH+ L DG VYA G FR
Sbjct: 110 FGCNDEGALGRPASSNEEESYPGLAQGLD-DIKAIQVTAGDSHTAILGSDGYVYAVGVFR 168
Query: 149 DSHGSMGLK---------------GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
D GS+ E ++ T + + +I+SG+DH ++LT+ G +
Sbjct: 169 DDDGSLAFSPTSLIERQFCRVFPTDEMLKATQTRRRKLPLAKQISSGSDHLLILTTEGQV 228
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR--------------------K 233
+ G +QGQLGR+ ++ +R+A R + L P E+ +R K
Sbjct: 229 YSMGTGKQGQLGRLPEKKTTRDAYRSLGAL-PEEIKARRTTPEFLQQVLVPGLVRARGFK 287
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG--NTCFFTPHLIKSLSD 290
I VFTG + +F + +G + A+GLNN+ QLG SE G + C F P +
Sbjct: 288 SIVKVFTGSWASFALDDEGHVWAWGLNNHHQLGVPRSEKASFGVDDNCVFFPQRATKFEN 347
Query: 291 KKFTMLASGQHHSLALNS-EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A GQHH+L + + K++A GR D GRLGL N E + E + + +L ++ +T +
Sbjct: 348 LDISAIAGGQHHTLVCSEKQQKVFAIGRGDCGRLGLNN-EEEMHELSEVTTLSNQNLTGV 406
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
AC S+A + G Y WG G QL NG++ D L
Sbjct: 407 ACAVAASYAFSNRGKAYAWGFGTNLQLTNGEDQDEL 442
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 173/393 (44%), Gaps = 78/393 (19%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ +A+G H ++ + + T GC ++G LGR AS N L G +K
Sbjct: 88 VTDVAAGGMHTAVVDEQHRVHTFGCNDEGALGR----PASSNEEESYPGLAQGLDDIKA- 142
Query: 234 HIDDVFTGVYNTFISSKGSILAFGL---NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
I + + S G + A G+ ++ S S +++ F T ++K+
Sbjct: 143 -IQVTAGDSHTAILGSDGYVYAVGVFRDDDGSLAFSPTSLIERQFCRVFPTDEMLKATQT 201
Query: 291 KKFTM-----LASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEP 331
++ + ++SG H L L +EG++Y+ G G+LG L + E
Sbjct: 202 RRRKLPLAKQISSGSDHLLILTTEGQVYSMGTGKQGQLGRLPEKKTTRDAYRSLGALPEE 261
Query: 332 VTEPTPIPS-LQD------------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG- 377
+ P LQ K+I + G+ SFA+D EG ++ WG+ N +QLG
Sbjct: 262 IKARRTTPEFLQQVLVPGLVRARGFKSIVKVFTGSWASFALDDEGHVWAWGLNNHHQLGV 321
Query: 378 ---------------------------------NGKEDDILNSEG--KIYAFGRHDYGRL 402
G+ ++ SE K++A GR D GRL
Sbjct: 322 PRSEKASFGVDDNCVFFPQRATKFENLDISAIAGGQHHTLVCSEKQQKVFAIGRGDCGRL 381
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
GL N E + E + + +L ++ +T +AC S+A + G Y WG G QL NG++ D
Sbjct: 382 GLNN-EEEMHELSEVTTLSNQNLTGVACAVAASYAFSNRGKAYAWGFGTNLQLTNGEDQD 440
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
L P+++ G+QL+ V +++ GGQH+V+LA P
Sbjct: 441 ELVPIELSGQQLDTRAVAKISGGGQHTVMLAVP 473
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 136/361 (37%), Gaps = 40/361 (11%)
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---RITQRSASRNARR 218
Q T K S I H + ++G+ L G GQLG IT+R R+
Sbjct: 21 QSTAKKTAPASAPAGIERQDIHDLTPANKGHCLAVGINCFGQLGVGDHITERKKPAFVRK 80
Query: 219 GMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
G L+ + DV G ++ + + + FG N+ LG S ++
Sbjct: 81 GT---------LENVLVTDVAAGGMHTAVVDEQHRVHTFGCNDEGALGRPASSNEEES-- 129
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVS---EPV 332
P L + L D K + +G H+ L S+G +YA G R D G L S
Sbjct: 130 ---YPGLAQGLDDIKAIQVTAGDSHTAILGSDGYVYAVGVFRDDDGSLAFSPTSLIERQF 186
Query: 333 TEPTPIPSLQDKTIT---------SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
P + T T I+ G+ + +EG +Y G G QLG E
Sbjct: 187 CRVFPTDEMLKATQTRRRKLPLAKQISSGSDHLLILTTEGQVYSMGTGKQGQLGRLPEKK 246
Query: 384 ILNSEGK-IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ + A R + V P + + K+I + G+ SFA+D EG
Sbjct: 247 TTRDAYRSLGALPEEIKARRTTPEFLQQVLVPGLVRARGFKSIVKVFTGSWASFALDDEG 306
Query: 443 VLYGWGMGNGYQLGNGKE-------DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
++ WG+ N +QLG + DD + N + +A G H+++ ++
Sbjct: 307 HVWAWGLNNHHQLGVPRSEKASFGVDDNCVFFPQRATKFENLDISAIAGGQHHTLVCSEK 366
Query: 496 K 496
+
Sbjct: 367 Q 367
>gi|391347935|ref|XP_003748209.1| PREDICTED: regulator of chromosome condensation-like [Metaseiulus
occidentalis]
Length = 405
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 206/374 (55%), Gaps = 29/374 (7%)
Query: 27 VPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT---FALVEDL-DNVVEVVVGGMHTV 82
VP+++ G L G + GQLG MER + F + DL + +V GGMH++
Sbjct: 4 VPSVR---GATTALVAGGNEVGQLG-----MERASACRFVPITDLQEKIVSCAAGGMHSL 55
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSE-FIPQTVNLPKKAV-QISAGDSHSVALLEDGT 140
L+E GK+ ++GCND+G+LGR E + E F V++ + V +I+AG+ HSVAL D
Sbjct: 56 LLSEHGKILSFGCNDDGSLGRLTEEEEECFKAAVVHIEGETVSKIAAGNIHSVALTTDCH 115
Query: 141 VYAWGSFRDSHGSMGL--KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
V+ WGS+RD+ G+ G+ K P+KL I IA GADH +ML+ G + T G
Sbjct: 116 VFIWGSYRDNSGAFGISPKNPEFISEPMKLSLPDSITDIACGADHTLMLSQEGVIYTMGI 175
Query: 199 PEQGQLGRITQRSASRNARRG-MSFLEPGEVPLKRKHIDDVFTGVYNTFIS------SKG 251
EQG+LGRI + R RR + L P + ++R +F G++ S S G
Sbjct: 176 AEQGRLGRIRKSHCCRENRRARQTMLTPLPMRVRRYRKPVLFDGIWAGRFSGFARSVSDG 235
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
I +GLNNY QLGE + + + N + L K++T + G+ H+LAL+SEG
Sbjct: 236 RIWGWGLNNYHQLGEINPDDHED-NFVYQPVELAAFDPKKRWTQICGGEQHTLALDSEGT 294
Query: 312 IYAFGRHDYGRLGL--KNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+Y+ GR YGRLGL + ++P VT+ TP+P L++ + SIA G+ SFAI G L W
Sbjct: 295 VYSMGRPLYGRLGLGPADANDPDVTKLTPVPGLEE-CVVSIAAGDNCSFAIHKSGQLLSW 353
Query: 369 GMGNGYQLGNGKED 382
G G LG G +
Sbjct: 354 GQGTN-MLGQGDRE 366
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 168/377 (44%), Gaps = 74/377 (19%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IV A+G H ++L+ G +L+ GC + G LGR+T+ + V ++ +
Sbjct: 44 IVSCAAGGMHSLLLSEHGKILSFGCNDDGSLGRLTEEEEE--------CFKAAVVHIEGE 95
Query: 234 HIDDVFTG-VYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ + G +++ +++ + +G +N G + N F + + SL D
Sbjct: 96 TVSKIAAGNIHSVALTTDCHVFIWGSYRDNSGAFGISPK------NPEFISEPMKLSLPD 149
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--------KNVSEPVTEPTPIPSLQ 342
T +A G H+L L+ EG IY G + GRLG +N T TP+P
Sbjct: 150 S-ITDIACGADHTLMLSQEGVIYTMGIAEQGRLGRIRKSHCCRENRRARQTMLTPLPMRV 208
Query: 343 DK-----TITSIACGNCVSFAID-SEGVLYGWGMGNGYQLGNGKEDD------------- 383
+ I G FA S+G ++GWG+ N +QLG DD
Sbjct: 209 RRYRKPVLFDGIWAGRFSGFARSVSDGRIWGWGLNNYHQLGEINPDDHEDNFVYQPVELA 268
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGL--KNVSEP-VTEPTPIPSLQ 421
L+SEG +Y+ GR YGRLGL + ++P VT+ TP+P L+
Sbjct: 269 AFDPKKRWTQICGGEQHTLALDSEGTVYSMGRPLYGRLGLGPADANDPDVTKLTPVPGLE 328
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-----KEDDILEPMKIEGKQLNN 476
+ + SIA G+ SFAI G L WG G LG G K+ D+ P + K L +
Sbjct: 329 E-CVVSIAAGDNCSFAIHKSGQLLSWGQGTN-MLGQGDREIAKDIDLYVPTQCASKHLKD 386
Query: 477 YTVLQVASGGQHSVILA 493
T +++A+G H++ +A
Sbjct: 387 KTTIEIAAGSHHAICIA 403
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 46 DTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE 104
++G G+ P E + + L D++ ++ G HT+ L+++G +YT G ++G LGR
Sbjct: 125 NSGAFGISPKNPEFISEPMKLSLPDSITDIACGADHTLMLSQEGVIYTMGIAEQGRLGRI 184
Query: 105 AEGDS------------EFIPQTVNLPKKAVQ---ISAGDSHSVAL-LEDGTVYAWGSFR 148
+ +P V +K V I AG A + DG ++ WG
Sbjct: 185 RKSHCCRENRRARQTMLTPLPMRVRRYRKPVLFDGIWAGRFSGFARSVSDGRIWGWG--L 242
Query: 149 DSHGSMGL-----KGEGIQKTPLKLESVS---GIVKIASGADHFVMLTSRGNLLTAGCPE 200
+++ +G + P++L + +I G H + L S G + + G P
Sbjct: 243 NNYHQLGEINPDDHEDNFVYQPVELAAFDPKKRWTQICGGEQHTLALDSEGTVYSMGRPL 302
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
G+LG + + + L P VP + + + G +F I G +L++G
Sbjct: 303 YGRLGLGPADANDPDVTK----LTP--VPGLEECVVSIAAGDNCSFAIHKSGQLLSWG-Q 355
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ LG+ D E+ K + T K L DK +A+G HH++ + S
Sbjct: 356 GTNMLGQGDREIAKDIDLYVPTQCASKHLKDKTTIEIAAGSHHAICIAS 404
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 37/183 (20%)
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G ++ G+LG++ S PI LQ+K ++ A
Sbjct: 17 GGNEVGQLGMERAS--ACRFVPITDLQEKIVSCAA------------------------- 49
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
G +L+ GKI +FG +D G LG E + ++ +T++ IA GN S
Sbjct: 50 --GGMHSLLLSEHGKILSFGCNDDGSLGRLTEEEEECFKAAVVHIEGETVSKIAAGNIHS 107
Query: 436 FAIDSEGVLYGWGM----GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
A+ ++ ++ WG + + + I EPMK+ ++ +A G H+++
Sbjct: 108 VALTTDCHVFIWGSYRDNSGAFGISPKNPEFISEPMKLSLPD----SITDIACGADHTLM 163
Query: 492 LAK 494
L++
Sbjct: 164 LSQ 166
>gi|328712488|ref|XP_001950480.2| PREDICTED: regulator of chromosome condensation-like [Acyrthosiphon
pisum]
Length = 543
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 31/375 (8%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDT--GQLGLGPDVMERKTFAL 64
+V RK+ E S K+ V + + G+++ G+ G GLGPD R+
Sbjct: 146 EVKRKKTEKISDKIAVDNRIETS-------GIMMIKGRDIVIAGLFGLGPD---REQLTN 195
Query: 65 VEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE-GDSEFIPQTVNLPKK 121
+ +L N + G MH + +TEDGK+ +WGCNDEGALGR+ DSE P V +P++
Sbjct: 196 LTELKNYKFKLIAAGSMHVLGVTEDGKLMSWGCNDEGALGRDTSVEDSETRPGIVQIPEE 255
Query: 122 A----VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI 177
ISAG SHS LL +G VY+WG+FRD +G MG + G ++ KL +S + KI
Sbjct: 256 EGAEIYSISAGGSHSAILLSNGNVYSWGTFRDKNGDMGFQPNGEKQLKPKL-IMSHVKKI 314
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+SG +H VML S+ + T GC ++GQLGRI QR ++R++R G L ++ RK +DD
Sbjct: 315 SSGINHLVML-SKNQVYTMGCGDEGQLGRICQRHSNRDSRVGKKLLLNPQLLNLRKKVDD 373
Query: 238 VFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
++ TF+ S SI +FGLN + QLG ++ + C + P + +SLS K +
Sbjct: 374 IWANYDTTFLRLSDSSIYSFGLNAHGQLG------VENDDKCVYFPQISESLSRLKIKSI 427
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
++G H L+ +G +Y G + GRLG+ +++E P + SL I CG+ S
Sbjct: 428 SAGTQHVTLLDEQGAVYVLGDYKDGRLGM-DIAENQKVPKVLSSL--PQIKLATCGSDNS 484
Query: 357 FAIDSEGVLYGWGMG 371
F + L WG+G
Sbjct: 485 FVVTENNKLMAWGIG 499
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 137/343 (39%), Gaps = 67/343 (19%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSF------RDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
I+AG H + + EDG + +WG RD+ GI + P E + I I+
Sbjct: 207 IAAGSMHVLGVTEDGKLMSWGCNDEGALGRDTSVEDSETRPGIVQIPE--EEGAEIYSIS 264
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK----H 234
+G H +L S GN+ + G R+ M F GE LK K H
Sbjct: 265 AGGSHSAILLSNGNVYSWGT--------------FRDKNGDMGFQPNGEKQLKPKLIMSH 310
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGE-------ADSEVQKSGNTCFFTPHLIKS 287
+ + +G+ + + SK + G + QLG DS V K +L K
Sbjct: 311 VKKISSGINHLVMLSKNQVYTMGCGDEGQLGRICQRHSNRDSRVGKKLLLNPQLLNLRKK 370
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+ D + A+ L L S+ IY+FG + +G+LG++N + V P SL I
Sbjct: 371 VDD----IWANYDTTFLRL-SDSSIYSFGLNAHGQLGVENDDKCVYFPQISESLSRLKIK 425
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
SI+ G + +L+ +G +Y G + GRLG+ ++
Sbjct: 426 SISAGT--------------------------QHVTLLDEQGAVYVLGDYKDGRLGM-DI 458
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+E P + SL I CG+ SF + L WG+G
Sbjct: 459 AENQKVPKVLSSL--PQIKLATCGSDNSFVVTENNKLMAWGIG 499
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 62/323 (19%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
IA+G+ H + +T G L++ GC ++G LGR T S PG V + +
Sbjct: 207 IAAGSMHVLGVTEDGKLMSWGCNDEGALGRDTSVEDSET--------RPGIVQIPEEEGA 258
Query: 237 DVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
++++ G ++ + S G++ ++G + D Q +G P LI S K
Sbjct: 259 EIYSISAGGSHSAILLSNGNVYSWGT---FRDKNGDMGFQPNGEKQL-KPKLIMSHVKK- 313
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
++SG +H L + S+ ++Y G D G+LG
Sbjct: 314 ---ISSGINH-LVMLSKNQVYTMGCGDEGQLGRI-------------------------- 343
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN---------SEGKIYAFGRHDYGRLG 403
C + V + K DDI S+ IY+FG + +G+LG
Sbjct: 344 -CQRHSNRDSRVGKKLLLNPQLLNLRKKVDDIWANYDTTFLRLSDSSIYSFGLNAHGQLG 402
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
++N + V P SL I SI+ G +D +G +Y G +LG DI
Sbjct: 403 VENDDKCVYFPQISESLSRLKIKSISAGTQHVTLLDEQGAVYVLGDYKDGRLGM----DI 458
Query: 464 LEPMKIEGKQLNNYTVLQVASGG 486
E K+ K L++ +++A+ G
Sbjct: 459 AENQKVP-KVLSSLPQIKLATCG 480
>gi|307103398|gb|EFN51658.1| hypothetical protein CHLNCDRAFT_59147 [Chlorella variabilis]
Length = 1070
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 180/336 (53%), Gaps = 40/336 (11%)
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGD-------------SEFIPQTVNLPKKA--- 122
MHTV LT D ++++WG NDEGALGRE G+ ++P V LPK+A
Sbjct: 1 MHTVALTADHQIFSWGVNDEGALGRETAGELWEKSGQASGKAGDAYVPGKVPLPKEAGKV 60
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKL----ESVSGIVKI 177
VQ++AGDSH+ L E G V+AWG++RD+ G MG IQ TP + ++ I++I
Sbjct: 61 VQVTAGDSHTCVLTELGAVWAWGTYRDASGVMGFGPHTRIQLTPACVYQPKKAEEQILRI 120
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR----- 232
ASGADH +T+ G LLT G +QGQLGR+ +R + R + + L P VP KR
Sbjct: 121 ASGADHTAGVTAGGALLTWGNGQQGQLGRVGERLSDRV--KMETLLAPHTVPFKRIRGAS 178
Query: 233 KHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I DV G Y TF ++ G I AFGLNNY QL G + P L+K+L K
Sbjct: 179 SRIVDVNCGTYATFATTAGGHIFAFGLNNYGQLA-------LPGQVPVYAPTLVKALEGK 231
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTIT 347
++ SGQHH+L L EG + +FGR YGRLG K+ EP + L+ +
Sbjct: 232 GSALVRSGQHHTLVLTQEGTLLSFGRPTYGRLGQKDAEVSADAACPEPKAVDGLEAVKVA 291
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
A G VS EG + WG G QLG G +D+
Sbjct: 292 GAAAGLAVSGCFSEEGDGWLWGFGTSNQLGKGDDDE 327
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 47 TGQLGLGPDVMERKTFALV----EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
+G +G GP + T A V + + ++ + G HT +T G + TWG +G LG
Sbjct: 89 SGVMGFGPHTRIQLTPACVYQPKKAEEQILRIASGADHTAGVTAGGALLTWGNGQQGQLG 148
Query: 103 REAEGDSEFI-------PQTVNLPK------KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
R E S+ + P TV + + V ++ G + A G ++A+G +
Sbjct: 149 RVGERLSDRVKMETLLAPHTVPFKRIRGASSRIVDVNCGTYATFATTAGGHIFAFGL--N 206
Query: 150 SHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
++G + L G+ P ++++ G + SG H ++LT G LL+ G P G+LG+
Sbjct: 207 NYGQLALPGQVPVYAPTLVKALEGKGSALVRSGQHHTLVLTQEGTLLSFGRPTYGRLGQ 265
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 34 TGGGVVLTCGQGDTGQLG---------------LGPDVMERKTFALVEDLDNVVEVVVGG 78
T GG +LT G G GQLG L P + K +V+V G
Sbjct: 131 TAGGALLTWGNGQQGQLGRVGERLSDRVKMETLLAPHTVPFKRIRGAS--SRIVDVNCGT 188
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALL 136
T T G ++ +G N+ G L + + P V K + + +G H++ L
Sbjct: 189 YATFATTAGGHIFAFGLNNYGQLALPGQ-VPVYAPTLVKALEGKGSALVRSGQHHTLVLT 247
Query: 137 EDGTVYAWGSFRDSHGSMGLK 157
++GT+ ++G R ++G +G K
Sbjct: 248 QEGTLLSFG--RPTYGRLGQK 266
>gi|402083663|gb|EJT78681.1| RCC1 domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 664
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 211/446 (47%), Gaps = 89/446 (19%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGV---------VLTCGQGDTGQLGLG-------- 53
K+ E ++ V A P K K G + V G+G +G+LGLG
Sbjct: 202 KEDEEDARPVKRVRTAAPISKVKLGAKINSAPETVLDVFVFGEGSSGELGLGNMRHEGKK 261
Query: 54 ------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
P + T A V VV++ GGMH V LT+D K+ TWG ND+GALGR+
Sbjct: 262 PLDVKRPRINHNLTAATV----GVVQIACGGMHVVALTKDNKILTWGVNDQGALGRDTTW 317
Query: 108 D-----------------------SEFIPQTVNLPKKA-----VQISAGDSHSVALLEDG 139
D E IP +++ A VQ+ A DS S AL EDG
Sbjct: 318 DGGLRDADAEDSDSEDDDDSGLSPKESIPAEIDMSDVAEGTRFVQVVASDSASFALTEDG 377
Query: 140 TVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
VY WG+FR S G +G IQKTP L +V++A+G++H + L G +LT GC
Sbjct: 378 RVYGWGTFRASDGILGFTPTVKIQKTPGLLAEPKKVVQLAAGSNHVMALDKAGKILTWGC 437
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK-HIDDVFTGVYNTF-ISSKGSILAF 256
PEQ QLGR R R+ S L PG + LKR I + G Y++F + S+G + A+
Sbjct: 438 PEQNQLGR---RCVQRDVL--ASALRPGGLGLKRSIKITKISCGSYHSFALDSEGIVYAW 492
Query: 257 GLNNYSQL----GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
GLNN+ +L G DS+ + I++L + K + G+HHS+A ++G++
Sbjct: 493 GLNNFGELAIEQGAGDSDA------AVLSATRIEALEEYKIADICGGEHHSVACTTDGRL 546
Query: 313 YAFGRHDYGRLGLKN------------VSEP--VTEPTPIPSLQDKTITSIACGNCVSFA 358
+GR D ++GL N P + PT +P L K I S+A G SFA
Sbjct: 547 LTWGRIDGHQVGLPNGAFNEDNAIYDEAKRPRILKVPTVVPDL--KNIVSVAAGTDNSFA 604
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ +G Y WG YQ G G DD+
Sbjct: 605 LTGDGKTYSWGFSTNYQTGLGTSDDV 630
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 167/390 (42%), Gaps = 82/390 (21%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------QRSASRNARRGM 220
G+V+IA G H V LT +LT G +QG LGR T + + G+
Sbjct: 280 GVVQIACGGMHVVALTKDNKILTWGVNDQGALGRDTTWDGGLRDADAEDSDSEDDDDSGL 339
Query: 221 SFLE--PGEVPLK-----RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEADS-E 270
S E P E+ + + + V + + ++ G + +G S LG + +
Sbjct: 340 SPKESIPAEIDMSDVAEGTRFVQVVASDSASFALTEDGRVYGWGTFRASDGILGFTPTVK 399
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+QK TP L+ KK LA+G +H +AL+ GKI +G + +LG + V
Sbjct: 400 IQK-------TPGLLAE--PKKVVQLAAGSNHVMALDKAGKILTWGCPEQNQLGRRCVQR 450
Query: 331 PVTEPTPIPS----LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL----GNGKED 382
V P + IT I+CG+ SFA+DSEG++Y WG+ N +L G G D
Sbjct: 451 DVLASALRPGGLGLKRSIKITKISCGSYHSFALDSEGIVYAWGLNNFGELAIEQGAGDSD 510
Query: 383 ------------------DIL---------NSEGKIYAFGRHDYGRLGLKN--------- 406
DI ++G++ +GR D ++GL N
Sbjct: 511 AAVLSATRIEALEEYKIADICGGEHHSVACTTDGRLLTWGRIDGHQVGLPNGAFNEDNAI 570
Query: 407 ---VSEP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
P + PT +P L K I S+A G SFA+ +G Y WG YQ G G D
Sbjct: 571 YDEAKRPRILKVPTVVPDL--KNIVSVAAGTDNSFALTGDGKTYSWGFSTNYQTGLGTSD 628
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
D+ P IE + + + +GGQ+S+I
Sbjct: 629 DVEVPTLIENTAVKDRKITFAGAGGQYSII 658
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 69/284 (24%)
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF--TMLASG 299
V + F+ +GS GL N G+ +V++ P + +L+ +A G
Sbjct: 236 VLDVFVFGEGSSGELGLGNMRHEGKKPLDVKR--------PRINHNLTAATVGVVQIACG 287
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-------------------VTEPTPIPS 340
H +AL + KI +G +D G LG + ++ IP+
Sbjct: 288 GMHVVALTKDNKILTWGVNDQGALGRDTTWDGGLRDADAEDSDSEDDDDSGLSPKESIPA 347
Query: 341 LQDKT-------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
D + + + SFA+ +G +YGWG
Sbjct: 348 EIDMSDVAEGTRFVQVVASDSASFALTEDGRVYGWGTF---------------------- 385
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
R G LG P + P L + K + +A G+ A+D G + WG
Sbjct: 386 --RASDGILGFT----PTVKIQKTPGLLAEPKKVVQLAAGSNHVMALDKAGKILTWGCPE 439
Query: 452 GYQLGNG--KEDDILEPMKIEGKQL-NNYTVLQVASGGQHSVIL 492
QLG + D + ++ G L + + +++ G HS L
Sbjct: 440 QNQLGRRCVQRDVLASALRPGGLGLKRSIKITKISCGSYHSFAL 483
>gi|387598185|gb|AFJ91748.1| RCC1 regulator of chromosome condensation, partial [Ostrea edulis]
Length = 217
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVE-DLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GVVL CG+GD GQLGLGPDVME+ ALV + +V V+ GGMHT CLT G+VYT+GC
Sbjct: 39 GVVLACGEGDVGQLGLGPDVMEKSRPALVSIKNEKIVSVIAGGMHTACLTNKGEVYTFGC 98
Query: 96 NDEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
NDEGALGR +E SE +P V P +A+Q+SAGDSHS L E+G V+AWG+FRD+ G +
Sbjct: 99 NDEGALGRNTSEEGSETLPDKVEFPGRAIQLSAGDSHSALLTEEGKVFAWGNFRDASGKI 158
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
GL EGIQ+TP+++ +VKI SG DH + LT G + + GC EQGQLGR+ +
Sbjct: 159 GLTSEGIQETPIEILHGETVVKIVSGGDHLLCLTEXGEIYSCGCAEQGQLGRVAE 213
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 41/217 (18%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
++ G +LA G + QLG ++KS P L+ S+ ++K + +G H+ L
Sbjct: 35 VAVTGVVLACGEGDVGQLGLGPDVMEKS------RPALV-SIKNEKIVSVIAGGMHTACL 87
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++G++Y FG +D G LG +N SE +E P DK V F
Sbjct: 88 TNKGEVYTFGCNDEGALG-RNTSEEGSETLP-----DK----------VEFP-------- 123
Query: 367 GWGMGNGYQLGNG-KEDDILNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
G QL G +L EGK++A+G R G++GL SE + E TPI L +
Sbjct: 124 ----GRAIQLSAGDSHSALLTEEGKVFAWGNFRDASGKIGL--TSEGIQE-TPIEILHGE 176
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
T+ I G + G +Y G QLG E
Sbjct: 177 TVVKIVSGGDHLLCLTEXGEIYSCGCAEQGQLGRVAE 213
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 103 REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
R +EGD +F K +IS VA+ G V A G G +GL + ++
Sbjct: 12 RGSEGDIKF-------SSKKHKISHPSHPDVAVT--GVVLACG--EGDVGQLGLGPDVME 60
Query: 163 KTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
K+ L S+ IV + +G H LT++G + T GC ++G LGR T S
Sbjct: 61 KSRPALVSIKNEKIVSVIAGGMHTACLTNKGEVYTFGCNDEGALGRNTSEEGSETL---- 116
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTC 278
P +V + I ++ ++ +G + A+G + ++G +Q+
Sbjct: 117 ----PDKVEFPGRAIQLSAGDSHSALLTEEGKVFAWGNFRDASGKIGLTSEGIQE----- 167
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
TP I+ L + + SG H L L G+IY+ G + G+LG
Sbjct: 168 --TP--IEILHGETVVKIVSGGDHLLCLTEXGEIYSCGCAEQGQLG 209
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA-LVEDLDNVVEVVVGGMHTVCLTEDGKV 90
C T G V T G D G LG +T VE +++ G H+ LTE+GKV
Sbjct: 86 CLTNKGEVYTFGCNDEGALGRNTSEEGSETLPDKVEFPGRAIQLSAGDSHSALLTEEGKV 145
Query: 91 YTWGC--NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+ WG + G +G +EG E P + + V+I +G H + L E G +Y+ G
Sbjct: 146 FAWGNFRDASGKIGLTSEGIQE-TPIEILHGETVVKIVSGGDHLLCLTEXGEIYSCG 201
>gi|389642071|ref|XP_003718668.1| RCC1 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351641221|gb|EHA49084.1| RCC1 domain-containing protein [Magnaporthe oryzae 70-15]
gi|440473847|gb|ELQ42625.1| RCC1 domain-containing protein [Magnaporthe oryzae Y34]
gi|440482532|gb|ELQ63017.1| RCC1 domain-containing protein [Magnaporthe oryzae P131]
Length = 669
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 202/428 (47%), Gaps = 81/428 (18%)
Query: 26 AVPTLKCKTGGGV---------VLTCGQGDTGQLGLGPDVMERK----------TFALVE 66
A P K K G + V G+G +G+LGLG E K L
Sbjct: 218 AAPVSKVKIGAKINNAPDAVLDVFVFGEGSSGELGLGSMKYENKKPIDVKRPRINHNLSA 277
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS----------------- 109
D VV++ GGMH + LT+D KV TWG ND+GALGR+ D
Sbjct: 278 DKVGVVQLDCGGMHAIALTKDNKVLTWGVNDQGALGRDTTWDGGLRDADAEDSDSDSEDG 337
Query: 110 --------EFIPQTVNLPKKA-----VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
E P +++ A VQ++A DS S AL EDG VY WG+FR S G +G
Sbjct: 338 EDSGLNPVESNPAEIDMSDVAEGTRFVQVAASDSASFALTEDGRVYGWGTFRASDGVLGF 397
Query: 157 KGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
IQK P L +V+IA+G++H + L S G L T GCPEQ QLGR R
Sbjct: 398 TPTIKIQKFPTLLAEPKKVVQIAAGSNHAMALDSAGKLYTWGCPEQNQLGR-------RC 450
Query: 216 ARRGM--SFLEPGEVPLKRK-HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG-EADSE 270
+R + S L PG V LKR + + G Y++F + +G + +GLNN+ QL E D+
Sbjct: 451 VQRELLASALRPGGVGLKRGVKVVKISCGSYHSFAVDKEGGVYTWGLNNFGQLAIEQDA- 509
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----- 325
+ T ++SL D K +A G+HHSLA +G++ +GR D + GL
Sbjct: 510 --GDSDAAVLTAVKVESLMDYKIVDIAGGEHHSLACTDDGRLLVWGRIDGHQTGLPFDSF 567
Query: 326 -------KNVSEP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ +P + PT IP L I S+A G SFAI +G +Y WG YQ
Sbjct: 568 TEENAIYDDYKKPRILKTPTVIPGLP--KIVSVAAGTDNSFAITEDGKVYSWGFSINYQT 625
Query: 377 GNGKEDDI 384
G G DD+
Sbjct: 626 GQGTSDDV 633
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 161/385 (41%), Gaps = 70/385 (18%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRSASRNARRGMS 221
G+V++ G H + LT +LT G +QG LGR T + S S + S
Sbjct: 281 GVVQLDCGGMHAIALTKDNKVLTWGVNDQGALGRDTTWDGGLRDADAEDSDSDSEDGEDS 340
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
L P E + DV G +++ S +F L ++ + S FT
Sbjct: 341 GLNPVESNPAEIDMSDVAEGTRFVQVAASDSA-SFALTEDGRV-YGWGTFRASDGVLGFT 398
Query: 282 PHL-IKSL-----SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-- 333
P + I+ KK +A+G +H++AL+S GK+Y +G + +LG + V +
Sbjct: 399 PTIKIQKFPTLLAEPKKVVQIAAGSNHAMALDSAGKLYTWGCPEQNQLGRRCVQRELLAS 458
Query: 334 --EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKED----- 382
P + + + I+CG+ SFA+D EG +Y WG+ N QL G D
Sbjct: 459 ALRPGGVGLKRGVKVVKISCGSYHSFAVDKEGGVYTWGLNNFGQLAIEQDAGDSDAAVLT 518
Query: 383 -------------DILNSE---------GKIYAFGRHDYGRLGL------------KNVS 408
DI E G++ +GR D + GL +
Sbjct: 519 AVKVESLMDYKIVDIAGGEHHSLACTDDGRLLVWGRIDGHQTGLPFDSFTEENAIYDDYK 578
Query: 409 EP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+P + PT IP L I S+A G SFAI +G +Y WG YQ G G DD+ P
Sbjct: 579 KPRILKTPTVIPGLP--KIVSVAAGTDNSFAITEDGKVYSWGFSINYQTGQGTSDDVEAP 636
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVI 491
I+ + + + +GGQ+S++
Sbjct: 637 TLIDNTAVRDRNITFAGAGGQYSML 661
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 92/255 (36%), Gaps = 70/255 (27%)
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF- 293
I++ V + F+ +GS GL + + +V++ P + +LS K
Sbjct: 230 INNAPDAVLDVFVFGEGSSGELGLGSMKYENKKPIDVKR--------PRINHNLSADKVG 281
Query: 294 -TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---------------------- 330
L G H++AL + K+ +G +D G LG +
Sbjct: 282 VVQLDCGGMHAIALTKDNKVLTWGVNDQGALGRDTTWDGGLRDADAEDSDSDSEDGEDSG 341
Query: 331 --PV-TEPTPIPSLQD----KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
PV + P I + D +A + SFA+ +G +YGWG
Sbjct: 342 LNPVESNPAEI-DMSDVAEGTRFVQVAASDSASFALTEDGRVYGWGTF------------ 388
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDSE 441
R G LG P + P+L + K + IA G+ + A+DS
Sbjct: 389 ------------RASDGVLGFT----PTIKIQKFPTLLAEPKKVVQIAAGSNHAMALDSA 432
Query: 442 GVLYGWGMGNGYQLG 456
G LY WG QLG
Sbjct: 433 GKLYTWGCPEQNQLG 447
>gi|50543738|ref|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]
gi|49645900|emb|CAG83964.1| YALI0A13299p [Yarrowia lipolytica CLIB122]
Length = 498
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 216/425 (50%), Gaps = 70/425 (16%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPD---VMERKT 61
L + RK +P+ + ++ + C+ V G GD +LGLGP+ ++R
Sbjct: 64 LSAIQRKHKHSPT---LLPLPSINKVDCE-----VFAFGTGDMCELGLGPEKASTVKRPR 115
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD------------- 108
+ + +V++ VGG H + L G+V++WG ND GALGR+ G
Sbjct: 116 LSPYLSKE-IVDIAVGGQHGLVLDSQGRVWSWGGNDLGALGRDTSGHEVLKDMDADESDD 174
Query: 109 --------SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE- 159
+E IP V+ ++ V+I A DS S+AL +G V+AWGSFR+S G+MG +
Sbjct: 175 EDDPKLNPAESIPALVDTDQRFVKIEASDSLSLALTAEGDVWAWGSFRNSQGTMGFSDKV 234
Query: 160 GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
+Q P+K+E +S I IA+G DH + LT G + T G E +LG + RS
Sbjct: 235 KVQNRPVKIEELSNIAAIAAGRDHVLALTQWGTVHTWGDSENFRLGWKSNRST------- 287
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
L P E+ L K+I V G +++F I + G +LA+GLN Y Q G + +S N
Sbjct: 288 ---LSPRELGL--KNIVYVGAGEFHSFAIDTDGKVLAWGLNQYGQCG----ILGQSDNAA 338
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSE------ 330
P + +L K + G+HHSLAL+ +G +Y+FGR+DY ++G K++ E
Sbjct: 339 VDGPTYVDALDGKDIVAVTGGEHHSLALSKDGTVYSFGRYDYHQIGFTTKDLPEGTVRDD 398
Query: 331 ---PVTEPTPIP-SL----QDKTITS---IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
P P P P SL D+ + IACG S ID +G ++ WG + +Q G+
Sbjct: 399 KGNPRFLPVPSPLSLGGEDDDEKLPKMRFIACGAHHSLIIDVDGRVWTWGFSSSFQTGHA 458
Query: 380 KEDDI 384
+EDD+
Sbjct: 459 EEDDV 463
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 187/431 (43%), Gaps = 52/431 (12%)
Query: 87 DGKVYTWGCND--EGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
D +V+ +G D E LG E + + L K+ V I+ G H + L G V++W
Sbjct: 87 DCEVFAFGTGDMCELGLGPEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSW 146
Query: 145 GSF------RDSHGSMGLKGEGIQKTPL----KLESVSGIVKIASGADHFVMLTSRGNLL 194
G RD+ G LK ++ KL I + FV + + +L
Sbjct: 147 GGNDLGALGRDTSGHEVLKDMDADESDDEDDPKLNPAESIPALVDTDQRFVKIEASDSLS 206
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV---PLKRKHIDDVFTGV----YNTFI 247
A E G + + RN++ M F + +V P+K + + ++ + +
Sbjct: 207 LALTAE----GDVWAWGSFRNSQGTMGFSDKVKVQNRPVKIEELSNIAAIAAGRDHVLAL 262
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G++ +G + +LG N +P + L K + +G+ HS A++
Sbjct: 263 TQWGTVHTWGDSENFRLGW-------KSNRSTLSP---RELGLKNIVYVGAGEFHSFAID 312
Query: 308 SEGKIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
++GK+ A+G + YG+ G+ S+ V PT + +L K I ++ G S A+ +G +
Sbjct: 313 TDGKVLAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGEHHSLALSKDGTV 372
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT-----EPTPIPSL 420
Y +G + +Q+G +D EG + R D G V P++ + +P +
Sbjct: 373 YSFGRYDYHQIGFTTKD---LPEGTV----RDDKGNPRFLPVPSPLSLGGEDDDEKLPKM 425
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+ IACG S ID +G ++ WG + +Q G+ +EDD+ P KI + V
Sbjct: 426 R-----FIACGAHHSLIIDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIMNTAIKPIDVK 480
Query: 481 QVASGGQHSVI 491
GGQ SV+
Sbjct: 481 MAGGGGQFSVV 491
>gi|328766889|gb|EGF76941.1| hypothetical protein BATDEDRAFT_36131 [Batrachochytrium
dendrobatidis JAM81]
Length = 471
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 202/398 (50%), Gaps = 35/398 (8%)
Query: 4 LLKKVLRKQAENPSQKVFVTSEAVPTLKC---KTGGGVVLTCGQGDTGQLGLG--PDVME 58
L + +L+ + N + V +++P T G V G GD GQLGLG PD M
Sbjct: 57 LTESLLKSASTNDAGGRLVRQQSMPAPLLALPNTEVGDVFVVGSGDCGQLGLGDDPDNMS 116
Query: 59 RKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
R+ A++ + N++ V GG+H + LT DGK+Y+WGCND+ ALGR E + Q +
Sbjct: 117 REKPAMLRYFNGKNIIGVFAGGLHNMALTIDGKLYSWGCNDQKALGRNGEETEPGLVQGL 176
Query: 117 NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSGIV 175
+ + V ++ GDS + AL +G VYAWG+FRD+ G G G Q P + + GIV
Sbjct: 177 D-KEFIVSVTCGDSVTAALTREGRVYAWGTFRDNTGIFGFAPGIKEQALPYLMPDLKGIV 235
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH- 234
+I +G +H V + G + T G EQGQLGR +A L P + + H
Sbjct: 236 QINAGTNHLVAVARDGKIYTWGVGEQGQLGRKVIARHVVDAS-----LTPRPINFRGGHY 290
Query: 235 ----IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ G YNTF + K + +FGLNN+ QLG D+E P IK +
Sbjct: 291 LSSRFARAYCGGYNTFLVHEKNVLFSFGLNNHGQLGLGDTESHDH-------PEAIKEID 343
Query: 290 -DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
D +A G+HHSL L+ +G IY FGR D G+LG + + + P + L++ S
Sbjct: 344 PDHGIADVAGGEHHSLVLDGKGNIYTFGRADDGQLGFPD-KKRLDVPKHLACLENA--VS 400
Query: 349 IACGNCVSFAI--DSEGV--LYGWGMGNGYQLGNGKED 382
++ G S A+ ++ G LYGWG G QL NG D
Sbjct: 401 VSAGGAFSLALIRNASGTNDLYGWGYGEMGQLSNGSVD 438
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 174/381 (45%), Gaps = 72/381 (18%)
Query: 162 QKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
++ P L +G I+ + +G H + LT G L + GC +Q LGR + +
Sbjct: 117 REKPAMLRYFNGKNIIGVFAGGLHNMALTIDGKLYSWGCNDQKALGRNGEET-------- 168
Query: 220 MSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGL--NNYSQLGEADSEVQKSG 275
EPG V L ++ I V G ++ +G + A+G +N G A +++
Sbjct: 169 ----EPGLVQGLDKEFIVSVTCGDSVTAALTREGRVYAWGTFRDNTGIFGFAPGIKEQA- 223
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE- 334
P+L+ L K + +G +H +A+ +GKIY +G + G+LG K ++ V +
Sbjct: 224 -----LPYLMPDL--KGIVQINAGTNHLVAVARDGKIYTWGVGEQGQLGRKVIARHVVDA 276
Query: 335 ---PTPIPSLQDKTITS----IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-------- 379
P PI ++S CG +F + + VL+ +G+ N QLG G
Sbjct: 277 SLTPRPINFRGGHYLSSRFARAYCGGYNTFLVHEKNVLFSFGLNNHGQLGLGDTESHDHP 336
Query: 380 ---KEDD----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
KE D +L+ +G IY FGR D G+LG + + + P + L
Sbjct: 337 EAIKEIDPDHGIADVAGGEHHSLVLDGKGNIYTFGRADDGQLGFPD-KKRLDVPKHLACL 395
Query: 421 QDKTITSIACGNCVSFAI--DSEGV--LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
++ S++ G S A+ ++ G LYGWG G QL NG D EP + L
Sbjct: 396 ENAV--SVSAGGAFSLALIRNASGTNDLYGWGYGEMGQLSNGSVD-CCEPEQF---NLKG 449
Query: 477 YTVLQVASGGQHSVILAKPKP 497
V+Q A+GGQH+++L +PKP
Sbjct: 450 RHVIQAAAGGQHTLMLLRPKP 470
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 35/150 (23%)
Query: 304 LAL-NSE-GKIYAFGRHDYGRLGLKNVSEPVT--EPTPIPSLQDKTITSIACGNCVSFAI 359
LAL N+E G ++ G D G+LGL + + ++ +P + K I + G + A+
Sbjct: 85 LALPNTEVGDVFVVGSGDCGQLGLGDDPDNMSREKPAMLRYFNGKNIIGVFAGGLHNMAL 144
Query: 360 DSEGVLYGWGMGNGYQLG-NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+G LY WG + LG NG+E TEP +
Sbjct: 145 TIDGKLYSWGCNDQKALGRNGEE------------------------------TEPGLVQ 174
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
L + I S+ CG+ V+ A+ EG +Y WG
Sbjct: 175 GLDKEFIVSVTCGDSVTAALTREGRVYAWG 204
>gi|346972722|gb|EGY16174.1| RCC1 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 665
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 195/402 (48%), Gaps = 66/402 (16%)
Query: 39 VLTCGQGDTGQLGLGP---------DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG DV R L VV++ GGMH LT D
Sbjct: 238 VYVFGEGSSGELGLGSKKHDGKKPIDVKRPRINHNLARTPVGVVQIACGGMHVAALTHDN 297
Query: 89 KVYTWGCNDEGALGREAEGD-------------------------SEFIPQTVNLP---- 119
K+ TWG ND+GALGR+ D E P V+
Sbjct: 298 KILTWGVNDQGALGRDTNWDGGLRDADQASDSGSDDEDDDSGVNPRESTPTAVSAEHFAP 357
Query: 120 -KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKI 177
K VQ+ A DS + AL EDG VY WG+FR S G +G + IQ TPL + + I +
Sbjct: 358 DAKFVQVVASDSATFALTEDGRVYGWGTFRSSDGILGFNQDIKIQMTPLYIPELKSIKAL 417
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
A+G++H + L ++GN+L GC +Q QLGR R RN MS L P + + +K+I+
Sbjct: 418 AAGSNHILALENKGNVLAWGCGQQNQLGR---RIIERNK---MSSLVPQGMGIPKKNIEK 471
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G Y++F + +KG + A+GLNN+++ G E + P ++ SL + K +
Sbjct: 472 IACGQYHSFALDTKGRVYAWGLNNFAETGI--REGAGEDDAVILRPTIVDSLEEHKIVDI 529
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQ 342
A GQHHSLA +GK+ +GR D ++G N + + PT +PS +
Sbjct: 530 AGGQHHSLACTEDGKLLTWGRFDGFQVGFAESAVSEDDLIRDESNNARILAVPTVVPSPE 589
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ +A G +FAI +G Y WG + YQ G G +D+
Sbjct: 590 --GVVRVAAGTDNNFAITKDGKAYSWGFSSNYQTGQGTIEDV 629
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 30/257 (11%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ +KG++LA+G +QLG E K + P + + K +A GQ+HS AL
Sbjct: 427 LENKGNVLAWGCGQQNQLGRRIIERNKMSS---LVPQGM-GIPKKNIEKIACGQYHSFAL 482
Query: 307 NSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+++G++YA+G +++ G++ + + PT + SL++ I IA G S A +
Sbjct: 483 DTKGRVYAWGLNNFAETGIREGAGEDDAVILRPTIVDSLEEHKIVDIAGGQHHSLACTED 542
Query: 363 GVLYGWGMGNGYQLGNGK----EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
G L WG +G+Q+G + EDD++ E N + + PT +P
Sbjct: 543 GKLLTWGRFDGFQVGFAESAVSEDDLIRDE----------------SNNARILAVPTVVP 586
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
S + + +A G +FAI +G Y WG + YQ G G +D+ P I+ +
Sbjct: 587 SPE--GVVRVAAGTDNNFAITKDGKAYSWGFSSNYQTGQGTIEDVEAPTLIDNTAVRGQK 644
Query: 479 VLQVASGGQHSVILAKP 495
++ +GGQ S++ P
Sbjct: 645 LVSAGAGGQFSILCGVP 661
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 65/291 (22%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ I+D T + + ++ +GS GL + G+ +V++ P + +L+
Sbjct: 226 RKINDAPTTLLDVYVFGEGSSGELGLGSKKHDGKKPIDVKR--------PRINHNLARTP 277
Query: 293 F--TMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPV---------- 332
+A G H AL + KI +G +D G LG L++ +
Sbjct: 278 VGVVQIACGGMHVAALTHDNKILTWGVNDQGALGRDTNWDGGLRDADQASDSGSDDEDDD 337
Query: 333 -------TEPTPIPSLQ---DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ PT + + D + + +FA+ +G +YGWG
Sbjct: 338 SGVNPRESTPTAVSAEHFAPDAKFVQVVASDSATFALTEDGRVYGWGTF----------- 386
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
R G LG + P IP L K+I ++A G+ A++++G
Sbjct: 387 -------------RSSDGILGFNQDIKIQMTPLYIPEL--KSIKALAAGSNHILALENKG 431
Query: 443 VLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ WG G QLG E + + + +G + + ++A G HS L
Sbjct: 432 NVLAWGCGQQNQLGRRIIERNKMSSLVPQGMGIPKKNIEKIACGQYHSFAL 482
>gi|303270823|ref|XP_003054773.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462747|gb|EEH60025.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 188/362 (51%), Gaps = 23/362 (6%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG 99
G GD GQLG G DVME L+ L +V++VV GGMHT+ + + G VY+ G NDEG
Sbjct: 102 GTGDAGQLGFGEDVMELSRPKLLNTLPSATSVLKVVCGGMHTLWIVDGGLVYSAGVNDEG 161
Query: 100 ALGREA---EGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
ALGR+A + D+E P V LP AV +S GDSH + DG V AWG+FR S G
Sbjct: 162 ALGRKANKDDADAETKPGPVRLPGGAAAVDLSTGDSHVAVVTSDGAVVAWGTFRTSSGLW 221
Query: 155 GLK-GEGIQKTPLKL---ESVSG-IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+ I ++P+ + E+ +G I +ASG DH + T+ G++ + GC E+G+LGR+
Sbjct: 222 AFTPDQQIARSPITVYSPETRAGRIASVASGTDHVIARTAGGDIYSWGCGEKGRLGRLPP 281
Query: 210 RSASRNARRGMS----FLEPGEVP-LKRKHIDDVFTGVYNT--FISSKGSILAFGLNNYS 262
A ++R S L +VP L + + G Y++ F++ + A+GLN+Y
Sbjct: 282 ADADNTSKRDASAKTKLLTACKVPNLPEGGVTAIAAGSYHSLAFVAGAKEVYAWGLNSYG 341
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG + N + P + L + F G++H++ L+ GK+YA GR YGR
Sbjct: 342 QLGLPYDMNEAGSNQVEYFPKRVAPLCGRGFVAGDGGENHTVLLDDGGKVYALGRSAYGR 401
Query: 323 LGLKNVSEPVTEPTPIPSL---QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LGL + E EP K T + G S + +G Y WG G+ QLG G
Sbjct: 402 LGLPGIDEMSDEPRSSAEHVVGVSKKATKVVAGGSTSACVTDDGDAYVWGYGDLGQLGRG 461
Query: 380 KE 381
+
Sbjct: 462 SD 463
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 36/246 (14%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDLD----------NVVEVVV 76
+T GG + + G G+ G+LG P + +R A + L V +
Sbjct: 258 ARTAGGDIYSWGCGEKGRLGRLPPADADNTSKRDASAKTKLLTACKVPNLPEGGVTAIAA 317
Query: 77 GGMHTVCLTEDGK-VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQI--------SA 127
G H++ K VY WG N G LG + + Q PK+ +
Sbjct: 318 GSYHSLAFVAGAKEVYAWGLNSYGQLGLPYDMNEAGSNQVEYFPKRVAPLCGRGFVAGDG 377
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGI----VKIASGA 181
G++H+V L + G VYA G R ++G +GL G E + E V G+ K+ +G
Sbjct: 378 GENHTVLLDDGGKVYALG--RSAYGRLGLPGIDEMSDEPRSSAEHVVGVSKKATKVVAGG 435
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+T G+ G + GQLGR + +S + R L P + ++ +D F G
Sbjct: 436 STSACVTDDGDAYVWGYGDLGQLGRGSDQSDALTPVR----LAPTKAMGGKRVVDVSFGG 491
Query: 242 VYNTFI 247
+ +
Sbjct: 492 QHTAAL 497
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 50/253 (19%)
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
L S + ++K+ G H + + G + +AG ++G LGR A+++ + P
Sbjct: 127 LPSATSVLKVVCGGMHTLWIVDGGLVYSAGVNDEGALGR----KANKDDADAETKPGPVR 182
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA---DSEVQKSGNTCFFTPHL 284
+P +D + ++S G+++A+G S A D ++ +S T + +P
Sbjct: 183 LPGGAAAVDLSTGDSHVAVVTSDGAVVAWGTFRTSSGLWAFTPDQQIARSPITVY-SPET 241
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG------LKNVSE-------P 331
+ +ASG H +A + G IY++G + GRLG N S+
Sbjct: 242 RAG----RIASVASGTDHVIARTAGGDIYSWGCGEKGRLGRLPPADADNTSKRDASAKTK 297
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+ +P+L + +T+IA G+ S A + KE +
Sbjct: 298 LLTACKVPNLPEGGVTAIAAGSYHSLAF----------------VAGAKE---------V 332
Query: 392 YAFGRHDYGRLGL 404
YA+G + YG+LGL
Sbjct: 333 YAWGLNSYGQLGL 345
>gi|255069897|ref|XP_002507030.1| predicted protein [Micromonas sp. RCC299]
gi|226522305|gb|ACO68288.1| predicted protein [Micromonas sp. RCC299]
Length = 460
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 194/405 (47%), Gaps = 32/405 (7%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD 69
R A+ + V ++ ++ G G GD GQLG+G DV+E L++ +
Sbjct: 7 RDYADVSERSELVRQTSLAVANAQSPPGECFVFGTGDNGQLGMGEDVVELARPRLLDTIP 66
Query: 70 -----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKK 121
+V+++ GGMHT+ + + G +Y+WG NDEGALGR + D E P V LP
Sbjct: 67 GVNAASVIKICCGGMHTLAVCQGGLMYSWGVNDEGALGRVTRKGAADEESKPGLVTLPSN 126
Query: 122 A---VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSG---- 173
A V +S GDSH + G + AWG FR+S G GE I KTP + S G
Sbjct: 127 AGGVVDVSTGDSHVAVVTSTGAIVAWGCFRNSSGQWAFTAGEKICKTPTVVYSPDGSQGS 186
Query: 174 -IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
+ASG DH + LT RG++ + GCPE+G+LGR+ A RG +P P K
Sbjct: 187 YATNVASGTDHVLALTRRGDVYSWGCPEKGRLGRVNADLADDAEARGPEKTKPLVTPAKV 246
Query: 233 KHIDDVFTGVY----NTFISSKGS--ILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLI 285
+I V T V ++F G + A+GLN+Y Q G D S T +F P +
Sbjct: 247 PNITAVVTAVVAGDNHSFAICAGDDVVYAWGLNSYGQTGLPYDPANPGSTQTSYF-PVAV 305
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL---- 341
SL G H+ L +GK+Y FGR YGRLG + EP P P L
Sbjct: 306 PSLRGLGIASGDGGSTHTTMLTRDGKVYTFGRPAYGRLGQLGIDPRDDEPKPTPGLVHGL 365
Query: 342 ---QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ K ++ A G+ + A+ ++G Y WG G LG G + D
Sbjct: 366 DGSKVKIVSVAAGGSGSNAAVTADGEAYVWGYGMEGNLGRGDDCD 410
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 172/394 (43%), Gaps = 76/394 (19%)
Query: 165 PLKLESVSGI-----VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
P L+++ G+ +KI G H + + G + + G ++G LGR+T++ A+ +
Sbjct: 59 PRLLDTIPGVNAASVIKICCGGMHTLAVCQGGLMYSWGVNDEGALGRVTRKGAADEESK- 117
Query: 220 MSFLEPGEV--PLKRKHIDDVFTG-VYNTFISSKGSILAFGL--NNYSQLGEADSEVQKS 274
PG V P + DV TG + ++S G+I+A+G N+ Q E
Sbjct: 118 -----PGLVTLPSNAGGVVDVSTGDSHVAVVTSTGAIVAWGCFRNSSGQWAFTAGEKICK 172
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV------ 328
T ++P + T +ASG H LAL G +Y++G + GRLG N
Sbjct: 173 TPTVVYSPDGSQG---SYATNVASGTDHVLALTRRGDVYSWGCPEKGRLGRVNADLADDA 229
Query: 329 -------SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS-EGVLYGWGM---------- 370
++P+ P +P++ +T++ G+ SFAI + + V+Y WG+
Sbjct: 230 EARGPEKTKPLVTPAKVPNIT-AVVTAVVAGDNHSFAICAGDDVVYAWGLNSYGQTGLPY 288
Query: 371 ---------------------GNGYQLGNG--KEDDILNSEGKIYAFGRHDYGRLGLKNV 407
G G G+G +L +GK+Y FGR YGRLG +
Sbjct: 289 DPANPGSTQTSYFPVAVPSLRGLGIASGDGGSTHTTMLTRDGKVYTFGRPAYGRLGQLGI 348
Query: 408 SEPVTEPTPIPSL-------QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
EP P P L + K ++ A G+ + A+ ++G Y WG G LG G +
Sbjct: 349 DPRDDEPKPTPGLVHGLDGSKVKIVSVAAGGSGSNAAVTADGEAYVWGYGMEGNLGRGDD 408
Query: 461 -DDILEPMK-IEGKQLNNYTVLQVASGGQHSVIL 492
DD P + + + + ++ V+ GGQH+ L
Sbjct: 409 CDDAHVPERLVPTRAMAGKKIVAVSFGGQHTAAL 442
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 37 GVVLTCGQ---GDTGQLGLGP-DVMERKTFALVEDLD----NVVEVVVGGMHT-VCLTED 87
G V T G+ G GQLG+ P D + T LV LD +V V GG + +T D
Sbjct: 330 GKVYTFGRPAYGRLGQLGIDPRDDEPKPTPGLVHGLDGSKVKIVSVAAGGSGSNAAVTAD 389
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLP------KKAVQISAGDSHSVALLEDG 139
G+ Y WG EG LGR + D +P+ + +P KK V +S G H+ AL G
Sbjct: 390 GEAYVWGYGMEGNLGRGDDCDDAHVPERL-VPTRAMAGKKIVAVSFGGQHTAALCVGG 446
>gi|358394418|gb|EHK43811.1| hypothetical protein TRIATDRAFT_293150 [Trichoderma atroviride IMI
206040]
Length = 573
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 199/409 (48%), Gaps = 78/409 (19%)
Query: 39 VLTCGQGDTGQLGLGPDV------MERKTFALVEDLD----NVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG ++ K L ++L VV++ GGMH V LT D
Sbjct: 138 VYVFGEGTSGELGLGSKRANGKKPIDVKRPRLNDNLSAKTVGVVQIACGGMHVVALTRDN 197
Query: 89 KVYTWGCNDEGALGREAEGD----------------------------------SEFIPQ 114
K+ TWG ND+GALGR+ D +F P
Sbjct: 198 KILTWGVNDQGALGRDTNWDGGLRDADEAEDSDSDDEDDTGINPKESTPTALSEEDFAPG 257
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSG 173
T K VQ+ A DS S AL EDG VY WG+FR S G +G + IQ P + ++
Sbjct: 258 T-----KFVQVEASDSASFALTEDGRVYGWGTFRSSDGILGFTETVRIQSRPALIPALKN 312
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +ASGA+H + L +GN++ GC +Q QLGR R RN MS L P V L R
Sbjct: 313 IKALASGANHILALDHKGNVVAWGCGQQNQLGR---RIIERNK---MSSLIPQGVGLPRG 366
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G Y++F I G++ +GLNN+ ++G +S + + P I L+D
Sbjct: 367 KIAKIACGSYHSFAIDKNGAVWGWGLNNFGEIGVENSAGED--DAVILKPVKISFLADHP 424
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEPVTE----------------P 335
T +A G HHSLA +S+G+++A+GR D ++G + +V E V E P
Sbjct: 425 ITDIAGGIHHSLACSSKGELFAWGRIDGYQVGFESDVVEKVDEEYVIRDEKGTARILVKP 484
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
T + D I +++ G SFAI +G +Y WG + YQ G G DDI
Sbjct: 485 TKHEGVSD--IVAVSAGTDNSFAISKDGKVYSWGFSSNYQTGQGTLDDI 531
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 110/293 (37%), Gaps = 66/293 (22%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
K ++D T V + ++ +G+ GL + G+ +V++ P L +LS K
Sbjct: 126 KKLNDAPTQVLDVYVFGEGTSGELGLGSKRANGKKPIDVKR--------PRLNDNLSAKT 177
Query: 293 F--TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN----------------------- 327
+A G H +AL + KI +G +D G LG
Sbjct: 178 VGVVQIACGGMHVVALTRDNKILTWGVNDQGALGRDTNWDGGLRDADEAEDSDSDDEDDT 237
Query: 328 -VSEPVTEPTPIPSLQD----KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
++ + PT + S +D + + SFA+ +G +YGWG
Sbjct: 238 GINPKESTPTAL-SEEDFAPGTKFVQVEASDSASFALTEDGRVYGWGTF----------- 285
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
R G LG + P IP+L K I ++A G A+D +G
Sbjct: 286 -------------RSSDGILGFTETVRIQSRPALIPAL--KNIKALASGANHILALDHKG 330
Query: 443 VLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ WG G QLG E + + + +G L + ++A G HS + K
Sbjct: 331 NVVAWGCGQQNQLGRRIIERNKMSSLIPQGVGLPRGKIAKIACGSYHSFAIDK 383
>gi|270004503|gb|EFA00951.1| hypothetical protein TcasGA2_TC003861 [Tribolium castaneum]
Length = 350
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 139/229 (60%), Gaps = 18/229 (7%)
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
DSHG+MGL G +K P ++ ++KIASGADH V LT+ G + T GCPEQGQLGR +
Sbjct: 69 DSHGNMGLTLRGNEKLPYEIIQEVHVIKIASGADHIVFLTNHGEVYTCGCPEQGQLGRTS 128
Query: 209 QRSASRNARRGM------SFLEPGEVPLK---RKHIDDVFTGVYNTF--ISSKGSILAFG 257
+R +SRNAR M L+P + LK + H D+++ G Y TF ++ K I FG
Sbjct: 129 ERGSSRNARSNMGKGQIAKLLQPTIISLKPSLKLHFDNIWAGTYCTFAKVAGKSDIYVFG 188
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
LNNY+QLG Q + P L K S ++M++S +HH++AL GK YA GR
Sbjct: 189 LNNYNQLGLKSLAPQ-------YLPILSKEFSKYNWSMISSAEHHTIALTENGKTYAIGR 241
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
DYGRLGL E +E T IP+L+DKT+ +ACG+ SFA+ +G+ Y
Sbjct: 242 KDYGRLGLGKDCEDASELTEIPALKDKTVVYVACGSSTSFAVTDKGMPY 290
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 7 KVLRKQA-----ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT 61
+V+R+QA E + E TL C G +T + G +GL E+
Sbjct: 27 QVVRQQAALILGEIADTQARAEKETGVTL-CNRVAGTAITGDEDSHGNMGLTLRGNEKLP 85
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE----------- 110
+ +++++ +V+++ G H V LT G+VYT GC ++G LGR +E S
Sbjct: 86 YEIIQEV-HVIKIASGADHIVFLTNHGEVYTCGCPEQGQLGRTSERGSSRNARSNMGKGQ 144
Query: 111 ----FIPQTVNL-PKKAVQ---ISAGDSHSVALLE-DGTVYAWGSFRDSHGSMGLKGEGI 161
P ++L P + I AG + A + +Y +G +++ +GLK
Sbjct: 145 IAKLLQPTIISLKPSLKLHFDNIWAGTYCTFAKVAGKSDIYVFG--LNNYNQLGLKSLAP 202
Query: 162 QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
Q P+ + S I+S H + LT G G + G+LG
Sbjct: 203 QYLPILSKEFSKYNWSMISSAEHHTIALTENGKTYAIGRKDYGRLG 248
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 80 HTVCLTEDGKVYTWGCNDEG--ALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
HT+ LTE+GK Y G D G LG++ E SE K V ++ G S S A+ +
Sbjct: 226 HTIALTENGKTYAIGRKDYGRLGLGKDCEDASELTEIPALKDKTVVYVACGSSTSFAVTD 285
Query: 138 DGTVY 142
G Y
Sbjct: 286 KGMPY 290
>gi|326433030|gb|EGD78600.1| hypothetical protein PTSG_01577 [Salpingoeca sp. ATCC 50818]
Length = 439
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 191/380 (50%), Gaps = 41/380 (10%)
Query: 43 GQGDTGQLG--LGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
G GQLG LG D RK L L+ ++V GGMHTV L EDGKV+T+GCNDE
Sbjct: 34 GTNSVGQLGRGLGCD-HRRKPTPLAGSLEGKKALDVCCGGMHTVVLGEDGKVHTFGCNDE 92
Query: 99 GALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
ALGR A+G+ E P + V+++AGDSH+ L +G VY G FRD G++
Sbjct: 93 AALGRAAKGEDEMTPGVAGGLEGLTIVKVTAGDSHTAVLTTEGDVYMCGLFRDDDGAIAF 152
Query: 157 KGEGIQKTPL----------KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
++ + IASG++H ++LT G + T G QGQLGR
Sbjct: 153 SDSIERQVTFAKVFPPANGRRYRQPPTAADIASGSNHLMILTDAGKVFTLGNGRQGQLGR 212
Query: 207 ITQRSASRNA--------------RRGMSFLE----PGEVPLKRKHIDDVFTGVYNTF-I 247
+T+ R++ R SFL+ P VP + K + +F + ++ I
Sbjct: 213 LTEPQTQRDSCRVTRDTPEWVVKRRTSSSFLKRILTPQPVP-RIKQVTKIFATTWGSYAI 271
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSG--NTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ ++ A+GLNNY QLG E Q + C F P ++ +A GQHH+L
Sbjct: 272 DAQNNVWAWGLNNYFQLGIKRDEEQSADVEANCVFHPQKADNIPQGTIVEVAGGQHHTLF 331
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +GK+YA GR + G LG N + + P + +L DK ITSI G+ S+A+ ++
Sbjct: 332 LMGDGKVYALGRGESGCLGQGN-EQTQSSPVEVKALADKKITSIGAGSVTSYAMAADKA- 389
Query: 366 YGWGMGNGYQLGNGKEDDIL 385
+ WG G QL ++D+L
Sbjct: 390 FAWGFGENNQLTAASDEDVL 409
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 166/388 (42%), Gaps = 84/388 (21%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRK 233
+ + G H V+L G + T GC ++ LGR A +G + PG L+
Sbjct: 66 LDVCCGGMHTVVLGEDGKVHTFGCNDEAALGR---------AAKGEDEMTPGVAGGLEGL 116
Query: 234 HIDDVFTGVYNT-FISSKGSILAFGL--NNYSQLGEADS-EVQKSGNTCFFTPHLIKSLS 289
I V G +T ++++G + GL ++ + +DS E Q + F + +
Sbjct: 117 TIVKVTAGDSHTAVLTTEGDVYMCGLFRDDDGAIAFSDSIERQVTFAKVFPPANGRRYRQ 176
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------------- 334
+ASG +H + L GK++ G G+LG ++EP T+
Sbjct: 177 PPTAADIASGSNHLMILTDAGKVFTLGNGRQGQLG--RLTEPQTQRDSCRVTRDTPEWVV 234
Query: 335 --------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
P P+P + K +T I S+AID++ ++ WG+ N +QLG +
Sbjct: 235 KRRTSSSFLKRILTPQPVPRI--KQVTKIFATTWGSYAIDAQNNVWAWGLNNYFQLGIKR 292
Query: 381 EDD-----------------------------------ILNSEGKIYAFGRHDYGRLGLK 405
+++ L +GK+YA GR + G LG
Sbjct: 293 DEEQSADVEANCVFHPQKADNIPQGTIVEVAGGQHHTLFLMGDGKVYALGRGESGCLGQG 352
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
N + + P + +L DK ITSI G+ S+A+ ++ + WG G QL ++D+L
Sbjct: 353 N-EQTQSSPVEVKALADKKITSIGAGSVTSYAMAADKA-FAWGFGENNQLTAASDEDVLV 410
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
PM++ G ++ + ++ G QH+V+LA
Sbjct: 411 PMEVTGSRIEGKRLAKIDGGDQHAVMLA 438
>gi|429859855|gb|ELA34615.1| ran exchange factor prp20 pim1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 672
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 197/396 (49%), Gaps = 58/396 (14%)
Query: 39 VLTCGQGDTGQLGLGP--------DVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGK 89
+ G+G +G+LGLG DV + ++ D VV++ GGMH LT+D K
Sbjct: 228 IYVFGEGSSGELGLGSKHKPKKVTDVKRPRLNPFLDAKDVGVVQIACGGMHAAALTKDNK 287
Query: 90 VYTWGCNDEGALGREAEGD----------------------SEFIPQTVN----LPK-KA 122
+ TWG ND+GALGRE + E P V+ P+ K
Sbjct: 288 ILTWGVNDQGALGRETTWEGGVRDVDDEEDEENDEDSGVNPRESTPTAVDSTHFAPEAKF 347
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGA 181
Q+ A DS + AL EDG VY WG+FR S G +G + IQ TP+ + S+ I +A+G+
Sbjct: 348 TQVVASDSATFALTEDGRVYGWGTFRSSDGILGFTEKISIQMTPMFIPSLKNITALAAGS 407
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L ++G +L GC +Q QLGR R RN ++ L P + L + I+ + G
Sbjct: 408 NHILALDNKGTVLAWGCGQQNQLGR---RVIERNK---LASLVPQSMGLPKNRINRIACG 461
Query: 242 VYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y++F K G + A+GLNN+++ G + + + P +++SL D K +A G+
Sbjct: 462 SYHSFAMDKDGVVWAWGLNNFAETGISSGAGED--DAVILRPTIVESLKDYKIKHIAGGE 519
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPSLQDKTITSIACGNCV- 355
HHSLA +G++ +GR D ++G+ + + + + + P + K NCV
Sbjct: 520 HHSLACTEKGQLLTWGRLDGHQVGIPIEELDAEDVIKDESQNPRILSKPTIVEDVANCVF 579
Query: 356 -------SFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ A+DS+G+ + WG YQ G G DDI
Sbjct: 580 VAAGVDNNIAVDSKGIAHSWGFSANYQTGQGTTDDI 615
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 179/431 (41%), Gaps = 95/431 (22%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-------------GIVKIASGADHFVML 187
+Y +G GS G G G + P K+ V G+V+IA G H L
Sbjct: 228 IYVFG-----EGSSGELGLGSKHKPKKVTDVKRPRLNPFLDAKDVGVVQIACGGMHAAAL 282
Query: 188 TSRGNLLTAGCPEQGQLGRIT-----------QRSASRNARRGMSFLEPGEVPLKRKHI- 235
T +LT G +QG LGR T + + G++ E + H
Sbjct: 283 TKDNKILTWGVNDQGALGRETTWEGGVRDVDDEEDEENDEDSGVNPRESTPTAVDSTHFA 342
Query: 236 -DDVFTGVYN----TF-ISSKGSILAFGLNNYSQ--LGEADS-EVQKSGNTCFFTPHLIK 286
+ FT V TF ++ G + +G S LG + +Q TP I
Sbjct: 343 PEAKFTQVVASDSATFALTEDGRVYGWGTFRSSDGILGFTEKISIQ-------MTPMFIP 395
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS---LQD 343
SL K T LA+G +H LAL+++G + A+G +LG + V E + +P L
Sbjct: 396 SL--KNITALAAGSNHILALDNKGTVLAWGCGQQNQLG-RRVIERNKLASLVPQSMGLPK 452
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL-------------- 385
I IACG+ SFA+D +GV++ WG+ N G G G++D ++
Sbjct: 453 NRINRIACGSYHSFAMDKDGVVWAWGLNNFAETGISSGAGEDDAVILRPTIVESLKDYKI 512
Query: 386 -------------NSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPSLQDKTITSI 428
+G++ +GR D ++G+ + + + + + P + K
Sbjct: 513 KHIAGGEHHSLACTEKGQLLTWGRLDGHQVGIPIEELDAEDVIKDESQNPRILSKPTIVE 572
Query: 429 ACGNCV--------SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
NCV + A+DS+G+ + WG YQ G G DDI P I+ + + ++
Sbjct: 573 DVANCVFVAAGVDNNIAVDSKGIAHSWGFSANYQTGQGTTDDIETPTTIDNSAVKDKKII 632
Query: 481 QVASGGQHSVI 491
+GGQ+SV+
Sbjct: 633 FAGAGGQYSVL 643
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 80/208 (38%), Gaps = 49/208 (23%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-----VTEP--TPIPSLQDKTITSIACGNCVSFAIDSEGV 364
IY FG G LGL + +P V P P +D + IACG + A+ +
Sbjct: 228 IYVFGEGSSGELGLGSKHKPKKVTDVKRPRLNPFLDAKDVGVVQIACGGMHAAALTKDNK 287
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV------------- 411
+ WG +N +G A GR G+++V +
Sbjct: 288 ILTWG---------------VNDQG---ALGRETTWEGGVRDVDDEEDEENDEDSGVNPR 329
Query: 412 -TEPTPIPSLQ---DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--LGNGKEDDI-L 464
+ PT + S + T + + +FA+ +G +YGWG LG ++ I +
Sbjct: 330 ESTPTAVDSTHFAPEAKFTQVVASDSATFALTEDGRVYGWGTFRSSDGILGFTEKISIQM 389
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVIL 492
PM I L N T L A+G H + L
Sbjct: 390 TPMFI--PSLKNITAL--AAGSNHILAL 413
>gi|380805715|gb|AFE74733.1| regulator of chromosome condensation isoform c, partial [Macaca
mulatta]
Length = 274
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 161/259 (62%), Gaps = 22/259 (8%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLL 194
EDG V+ WGSFRD++G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L
Sbjct: 1 EDGRVFLWGSFRDNNGVIGLL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLY 59
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF- 246
T GC EQGQLGR+ + A+R R+G+ L P V LK R H+ D F G Y TF
Sbjct: 60 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 119
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSL 304
IS +G + FGL+NY QLG +E +CF P + S S K + + GQHH++
Sbjct: 120 ISHEGHVYGFGLSNYHQLGTPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTV 172
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 173 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGR 230
Query: 365 LYGWGMGNGYQLGNGKEDD 383
++ WGMG YQLG G+++D
Sbjct: 231 VFAWGMGTNYQLGTGQDED 249
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 45/241 (18%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP 339
D +ASG H + L + G +Y G + G+LG + E + P +
Sbjct: 36 DVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM 95
Query: 340 -----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------- 378
S CG +FAI EG +YG+G+ N +QLG
Sbjct: 96 LKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFK 155
Query: 379 -----------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L ++
Sbjct: 156 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVS 213
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SGG
Sbjct: 214 SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGG 273
Query: 487 Q 487
Q
Sbjct: 274 Q 274
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HTVC+ +GK Y+ G + G LG + + IP ++ ++ G S A+
Sbjct: 167 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVT 226
Query: 137 EDGTVYAWG 145
+DG V+AWG
Sbjct: 227 KDGRVFAWG 235
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 309 EGKIYAFG--RHDYGRLGLKNVSEPVTEP-TPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+G+++ +G R + G +GL EP+ + P+ D + +A GN + + G L
Sbjct: 2 DGRVFLWGSFRDNNGVIGLL---EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDL 58
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKT 424
Y G G QLG + ++ + G GR GL+ + P S
Sbjct: 59 YTLGCGEQGQLG--RVPELFANRG----------GRQGLERLLVPKCVMLKSRGSRGHVR 106
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA- 483
CG +FAI EG +YG+G+ N +QLG + P + N T V
Sbjct: 107 FQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNL--TSFKNSTKSWVGF 164
Query: 484 SGGQHSVI 491
SGGQH +
Sbjct: 165 SGGQHHTV 172
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 23/156 (14%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE----------GDSEFIPQTVNLPK 120
VV+V G H V LT G +YT GC ++G LGR E + +P+ V L
Sbjct: 39 VVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKS 98
Query: 121 KAVQ-------ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
+ + G + A+ +G VY +G ++ +G G P L S
Sbjct: 99 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG--LSNYHQLGTPGTESCFIPQNLTSFKN 156
Query: 174 IVK----IASGADHFVMLTSRGNLLTAGCPEQGQLG 205
K + G H V + S G + G E G+LG
Sbjct: 157 STKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG 192
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 173 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 232
Query: 92 TWGCNDEGALGREAEGDS 109
WG LG + D+
Sbjct: 233 AWGMGTNYQLGTGQDEDA 250
>gi|296819631|ref|XP_002849878.1| RNA transport protein 2 [Arthroderma otae CBS 113480]
gi|238840331|gb|EEQ29993.1| RNA transport protein 2 [Arthroderma otae CBS 113480]
Length = 565
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 199/428 (46%), Gaps = 82/428 (19%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + P+ K + V CG+G G+LGLG DV + AL+
Sbjct: 130 RKPKPKVVINK--APSQKLR-----VFVCGEGSQGELGLGSAKGTVDVKRPRLNALLAAE 182
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS------------------ 109
D VV+V GGMH V LT DGKV TWG ND+GALGR+ +
Sbjct: 183 DVGVVQVAAGGMHCVALTHDGKVLTWGVNDQGALGRDTAWEGGLKDIDAKSDCSSDSGSD 242
Query: 110 ------EFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
E P + P A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 243 TGLNPHESTPTAI--PSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGIIGF 300
Query: 157 KGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ IQ TP + + I +A G +H + L SRG + G +Q QLGR R RN
Sbjct: 301 DADTKIQATPKLIPGLKKITHLACGDNHTLALDSRGAVFAWGSGQQNQLGR---RIVERN 357
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS----QLGEADSE 270
G L+P E L K+I V G +++F + G + +GLN+Y Q G D E
Sbjct: 358 KLNG---LQPREFGLP-KNIVHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDE 413
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK---- 326
P +I SL DK T + G HHSLA +EG+ +GR D + GLK
Sbjct: 414 A------VVLHPTVIDSLKDKNITQICGGSHHSLARTAEGECLVWGRLDGFQSGLKVENL 467
Query: 327 ----------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
N + + +PT +P + + +A G S AID++G + WG YQ
Sbjct: 468 PDSAVIKDDRNRARVLFQPTAVPGFKAE---YVAAGADHSIAIDNDGRAWTWGFSANYQT 524
Query: 377 GNGKEDDI 384
G G +DDI
Sbjct: 525 GQGTDDDI 532
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 186/431 (43%), Gaps = 110/431 (25%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E V G+V++A+G H V LT G +LT G +Q
Sbjct: 155 SQGELGLGSAKGTVDVKRPRLNALLAAEDV-GVVQVAAGGMHCVALTHDGKVLTWGVNDQ 213
Query: 202 GQLGR----------ITQRSASRNARRGMSFLEPGE-----VPLKR----KHIDDVFTGV 242
G LGR I +S + + L P E +P I V G
Sbjct: 214 GALGRDTAWEGGLKDIDAKSDCSSDSGSDTGLNPHESTPTAIPSDAFPEGTVIVQVAAGD 273
Query: 243 YNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
++F ++ G + +G N +G +AD+++Q TP LI L KK T LA
Sbjct: 274 SSSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQA-------TPKLIPGL--KKITHLAC 324
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------KTITSIACG 352
G +H+LAL+S G ++A+G +LG + + E + LQ K I + CG
Sbjct: 325 GDNHTLALDSRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGLPKNIVHVGCG 379
Query: 353 NCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL----------------------- 385
+ SFA+ G +YGWG+ + G Q G G ++ ++
Sbjct: 380 SFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVVLHPTVIDSLKDKNITQICGGSHH 439
Query: 386 ----NSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPTPIPSLQDKTITS 427
+EG+ +GR D + GLK N + + +PT +P + + +
Sbjct: 440 SLARTAEGECLVWGRLDGFQSGLKVENLPDSAVIKDDRNRARVLFQPTAVPGFKAEYV-- 497
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQV 482
A G S AID++G + WG YQ G G +DD I++ + GK+LN
Sbjct: 498 -AAGADHSIAIDNDGRAWTWGFSANYQTGQGTDDDIEVATIVDNTAVRGKKLNT-----A 551
Query: 483 ASGGQHSVILA 493
+GGQ+SV A
Sbjct: 552 GAGGQYSVFTA 562
>gi|302885386|ref|XP_003041585.1| hypothetical protein NECHADRAFT_35093 [Nectria haematococca mpVI
77-13-4]
gi|256722489|gb|EEU35872.1| hypothetical protein NECHADRAFT_35093 [Nectria haematococca mpVI
77-13-4]
Length = 610
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 198/401 (49%), Gaps = 65/401 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL---DN-------VVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG + K V+ DN VV++ GGMH V LT D
Sbjct: 160 VYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLSAANTGVVQISCGGMHAVALTHDN 219
Query: 89 KVYTWGCNDEGALGREAEGD------------------------SEFIPQTVN-----LP 119
K+ TWG ND+GALGR+ D E P V+
Sbjct: 220 KILTWGVNDQGALGRDTNWDGGLRGMDKEEDSDSEDEDDTGINPKESTPTAVSDDHFAAG 279
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIA 178
K VQ+ A DS S AL EDG VY WG+FR S G +G + +Q TP+ + ++ I +A
Sbjct: 280 TKFVQVVASDSASFALTEDGRVYGWGTFRSSDGILGFSETVKVQSTPVLVPTLKKITALA 339
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G++H + L +GN++ GC +Q QLGR R RN MS L P V L R I +
Sbjct: 340 AGSNHVLALDIKGNVVAWGCGQQNQLGR---RIIERNK---MSSLTPQGVGLPRGKIVKI 393
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y++F I +KG + +GLNN+ ++G + + + P + SL D T +
Sbjct: 394 ACGSYHSFAIDNKGCVYGWGLNNFGEIGIESNAGED--DAVILRPVKLTSLEDYNITDID 451
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLG--LKNVSEPVT------------EPTPIPSLQD 343
G+HHSLA +G+++ +GR D ++G + ++E + +PT P +
Sbjct: 452 GGEHHSLACAEDGELFTWGRVDGYQVGFEFEKLNEDIAIYDERGNARILFKPTVQPDV-- 509
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
K S+A G SFAI SEG ++ WG + YQ G G DDI
Sbjct: 510 KETVSVAAGTDNSFAITSEGKVFSWGFSSNYQTGQGTIDDI 550
>gi|121714259|ref|XP_001274740.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus clavatus NRRL
1]
gi|119402894|gb|EAW13314.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus clavatus NRRL
1]
Length = 542
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 197/400 (49%), Gaps = 66/400 (16%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ CG+G +G+LGLG DV R L D VV+V VGGMH V LT D K+ T
Sbjct: 121 IYVCGEGSSGELGLGAEKNAVDVKRPRLNPHLPADRIGVVQVAVGGMHCVALTHDNKILT 180
Query: 93 WGCNDEGALGREA-------------------------EGDSEFIPQTVNLPKKA----- 122
WG ND+GALGR+ G + + +P +A
Sbjct: 181 WGVNDQGALGRDTTWEGGYKDIDDNKDDADSDSDSDDDSGLNPYESTPTAIPSEAFPSDT 240
Query: 123 --VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIAS 179
V+++AGDS S AL +DG VY WG+FR + G +G + +Q +P + S+ I +A
Sbjct: 241 VFVEVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFDAQHKVQVSPTLIPSLKKIRHLAC 300
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G +H + L RG + + G +Q QLGR R RN G L+P E L K I +
Sbjct: 301 GDNHVLALDERGAVFSWGSGQQNQLGR---RIIERNRLNG---LQPREFGLP-KSIVHIG 353
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +++F + G + A+GLN++ + G E P ++ SLS KK T L
Sbjct: 354 CGAFHSFAVDKSGKVYAWGLNSFGETGI--REGAGDDEAAIVHPTVVDSLSGKKITQLCG 411
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDK 344
G HHSLA++ +G+ A+GR D + GLK + P + +PTP+P ++
Sbjct: 412 GAHHSLAVSDDGECLAWGRLDGYQTGLKIDTLPADAVVKDERGRPRILIDPTPVPGIK-- 469
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ +A G+ S AID++G + WG YQ G G +DDI
Sbjct: 470 -ASLVAAGSDHSIAIDTDGRAWSWGFSATYQTGQGTQDDI 508
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 172/400 (43%), Gaps = 95/400 (23%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT----------------QRSASRNA 216
G+V++A G H V LT +LT G +QG LGR T + +
Sbjct: 158 GVVQVAVGGMHCVALTHDNKILTWGVNDQGALGRDTTWEGGYKDIDDNKDDADSDSDSDD 217
Query: 217 RRGMSFLE--PGEVPLKRKHIDDVF----TGVYNTF-ISSKGSILAFGL--NNYSQLG-E 266
G++ E P +P + D VF G ++F ++ G + +G +N LG +
Sbjct: 218 DSGLNPYESTPTAIPSEAFPSDTVFVEVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFD 277
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
A +VQ S P LI SL KK LA G +H LAL+ G ++++G +LG +
Sbjct: 278 AQHKVQVS-------PTLIPSL--KKIRHLACGDNHVLALDERGAVFSWGSGQQNQLGRR 328
Query: 327 NVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQL 376
+ E + LQ K+I I CG SFA+D G +Y WG+ + G +
Sbjct: 329 -----IIERNRLNGLQPREFGLPKSIVHIGCGAFHSFAVDKSGKVYAWGLNSFGETGIRE 383
Query: 377 GNGKEDDIL---------------------------NSEGKIYAFGRHDYGRLGLKNVSE 409
G G ++ + + +G+ A+GR D + GLK +
Sbjct: 384 GAGDDEAAIVHPTVVDSLSGKKITQLCGGAHHSLAVSDDGECLAWGRLDGYQTGLKIDTL 443
Query: 410 P--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
P + +PTP+P ++ + +A G+ S AID++G + WG YQ
Sbjct: 444 PADAVVKDERGRPRILIDPTPVPGIK---ASLVAAGSDHSIAIDTDGRAWSWGFSATYQT 500
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
G G +DDI +E + ++ +GGQ SV A+P
Sbjct: 501 GQGTQDDIEVATVVENTAVRGKKLIWTGAGGQFSV-FAEP 539
>gi|342873514|gb|EGU75680.1| hypothetical protein FOXB_13829 [Fusarium oxysporum Fo5176]
Length = 583
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 193/406 (47%), Gaps = 75/406 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL---DN-------VVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG + K V+ DN VV++ GGMH V LT D
Sbjct: 148 VYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLSAANIGVVQISCGGMHAVALTHDN 207
Query: 89 KVYTWGCNDEGALGRE----------------------------------AEGDSEFIPQ 114
K+ TWG ND+GALGR+ A D F P
Sbjct: 208 KILTWGVNDQGALGRDTNWDGGLRDMDKSEDSDSEDEDDTGINPMESTPTAVSDEHFAPG 267
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSG 173
T K VQ+ A DS S AL EDG VY WG+FR S G +G +Q TPL + +
Sbjct: 268 T-----KFVQVVASDSASFALTEDGRVYGWGTFRSSDGILGFSETIKVQSTPLMIRDLKN 322
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +A+G++H + L +GN++ GC +Q QLGR R RN MS L P V L R
Sbjct: 323 IKALAAGSNHILALDHKGNVVAWGCGQQNQLGR---RIIERNK---MSSLIPQGVGLPRG 376
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G Y++F I G + +GLNN+ ++G + + + P + L D
Sbjct: 377 KIAKIACGSYHSFAIDKSGQVYGWGLNNFGEIGVESNAGED--DAVILRPAKLTYLDDYN 434
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK--NVSEPVT------------EPTPI 338
T + G+HHSLA + +G + +GR D ++G + +SE T +PT
Sbjct: 435 ITEIDGGEHHSLACSDKGDLLTWGRVDGYQVGFEFDKLSEDNTIYDERGNARILFKPTIQ 494
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
P +D I ++A G +FAI S+G +Y WG + YQ G G DDI
Sbjct: 495 PDAKD--IVAVAAGTDNNFAIASDGKVYSWGFSSNYQTGQGTIDDI 538
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 191/438 (43%), Gaps = 53/438 (12%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK----------KAVQISAGDSHSVALLEDG 139
VY +G G LG ++ + P V P+ VQIS G H+VAL D
Sbjct: 148 VYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLSAANIGVVQISCGGMHAVALTHDN 207
Query: 140 TVYAWGSF------RDSHGSMGLKG-EGIQKTPLKLESVSGI-----VKIASGADHFVML 187
+ WG RD++ GL+ + + + + E +GI A +HF
Sbjct: 208 KILTWGVNDQGALGRDTNWDGGLRDMDKSEDSDSEDEDDTGINPMESTPTAVSDEHFAPG 267
Query: 188 TSRGNLLTAGCPEQG--QLGRITQRSASRNARRGMSFLEPGEV---PL---KRKHIDDVF 239
T ++ + + GR+ R++ + F E +V PL K+I +
Sbjct: 268 TKFVQVVASDSASFALTEDGRVYGWGTFRSSDGILGFSETIKVQSTPLMIRDLKNIKALA 327
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G + + KG+++A+G +QLG E K + P + L K +A
Sbjct: 328 AGSNHILALDHKGNVVAWGCGQQNQLGRRIIERNKMSS---LIPQGV-GLPRGKIAKIAC 383
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEP---VTEPTPIPSLQDKTITSIACGNC 354
G +HS A++ G++Y +G +++G +G++ N E + P + L D IT I G
Sbjct: 384 GSYHSFAIDKSGQVYGWGLNNFGEIGVESNAGEDDAVILRPAKLTYLDDYNITEIDGGEH 443
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
S A +G L WG +GYQ+G E D L+ + IY R+ K P
Sbjct: 444 HSLACSDKGDLLTWGRVDGYQVGF--EFDKLSEDNTIY--DERGNARILFK--------P 491
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
T P +D I ++A G +FAI S+G +Y WG + YQ G G DDI P I+ +
Sbjct: 492 TIQPDAKD--IVAVAAGTDNNFAIASDGKVYSWGFSSNYQTGQGTIDDIHTPTLIDNTAI 549
Query: 475 NNYTVLQVASGGQHSVIL 492
++ +GGQ+SV+
Sbjct: 550 RGKKIIGAGAGGQYSVLF 567
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 110/299 (36%), Gaps = 66/299 (22%)
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
E P K ++D T + + ++ FG + +LG V P L
Sbjct: 130 EFPAIGKKLNDAPTQILDVYV--------FGEGSSGELGLGSKRVNNKKPIDVKRPRLND 181
Query: 287 SLSDKKF--TMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVT--- 333
+LS ++ G H++AL + KI +G +D G LG L+++ +
Sbjct: 182 NLSAANIGVVQISCGGMHAVALTHDNKILTWGVNDQGALGRDTNWDGGLRDMDKSEDSDS 241
Query: 334 -----------EPTPIPSLQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
E TP ++ D+ + + SFA+ +G +YGWG
Sbjct: 242 EDEDDTGINPMESTPT-AVSDEHFAPGTKFVQVVASDSASFALTEDGRVYGWGTF----- 295
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
R G LG + + P I L K I ++A G+
Sbjct: 296 -------------------RSSDGILGFSETIKVQSTPLMIRDL--KNIKALAAGSNHIL 334
Query: 437 AIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
A+D +G + WG G QLG E + + + +G L + ++A G HS + K
Sbjct: 335 ALDHKGNVVAWGCGQQNQLGRRIIERNKMSSLIPQGVGLPRGKIAKIACGSYHSFAIDK 393
>gi|315040529|ref|XP_003169642.1| RNA transporter 2 [Arthroderma gypseum CBS 118893]
gi|311346332|gb|EFR05535.1| RNA transporter 2 [Arthroderma gypseum CBS 118893]
Length = 565
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 200/427 (46%), Gaps = 79/427 (18%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + P+ K + V CG+G G+LGLG DV + AL+
Sbjct: 129 RKPKPKVVINK--APSQKLR-----VFVCGEGSQGELGLGSAKGTVDVKRPRLNALLAAE 181
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA--EGDSEFIPQT---------- 115
D VV+V GGMH V LT DGKV TWG ND+GALGR+ EG + I
Sbjct: 182 DVGVVQVAAGGMHCVALTHDGKVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDCSSDSGS 241
Query: 116 -----------VNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
LP A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 242 DSGLNPHESTPTALPSDAFPEETIIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGILGFD 301
Query: 158 GE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
E +Q TP + + I IA G +H + + SRG + G +Q QLGR R RN
Sbjct: 302 AETKVQATPKLIPGLKKITHIACGDNHALAIDSRGAVFAWGSGQQNQLGR---RIVERNK 358
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS----QLGEADSEV 271
G L+P E L K+I V G +++F + G + +GLN+Y Q G D E
Sbjct: 359 LNG---LQPREFGLP-KNIVHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEA 414
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----- 326
P +I SL+DK + G HH++A ++G+ A+GR D + GLK
Sbjct: 415 ------VILHPTVIDSLNDKSIVQICGGSHHTIARTADGECLAWGRIDGFQSGLKVDTLS 468
Query: 327 -------NVSEP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ P + EPT +P + +A G S AID+EG + WG YQ G
Sbjct: 469 DSAVIKDDRDRPRVLFEPTAVPGFK---ADYVAAGADHSIAIDNEGRAWTWGFSANYQTG 525
Query: 378 NGKEDDI 384
G +DDI
Sbjct: 526 QGTDDDI 532
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 182/432 (42%), Gaps = 111/432 (25%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E V G+V++A+G H V LT G +LT G +Q
Sbjct: 154 SQGELGLGSAKGTVDVKRPRLNALLAAEDV-GVVQVAAGGMHCVALTHDGKVLTWGVNDQ 212
Query: 202 GQLGRIT--------------------QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
G LGR T + N P + + I V G
Sbjct: 213 GALGRDTTWEGGLKDIDDAKSDCSSDSGSDSGLNPHESTPTALPSDAFPEETIIVQVAAG 272
Query: 242 VYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++F ++ G + +G N LG +A+++VQ TP LI L KK T +A
Sbjct: 273 DSSSFALTDDGLVYGWGTFRGNEGILGFDAETKVQA-------TPKLIPGL--KKITHIA 323
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------KTITSIAC 351
G +H+LA++S G ++A+G +LG + + E + LQ K I + C
Sbjct: 324 CGDNHALAIDSRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGLPKNIVHVGC 378
Query: 352 GNCVSFAIDSEGVLYGWGMGN----GYQLGNGKED---------DILN------------ 386
G+ SFA+ G +YGWG+ + G Q G G ++ D LN
Sbjct: 379 GSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVILHPTVIDSLNDKSIVQICGGSH 438
Query: 387 ------SEGKIYAFGRHDYGRLGLK------------NVSEP--VTEPTPIPSLQDKTIT 426
++G+ A+GR D + GLK + P + EPT +P +
Sbjct: 439 HTIARTADGECLAWGRIDGFQSGLKVDTLSDSAVIKDDRDRPRVLFEPTAVPGFK---AD 495
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQ 481
+A G S AID+EG + WG YQ G G +DD I++ + GK+LN
Sbjct: 496 YVAAGADHSIAIDNEGRAWTWGFSANYQTGQGTDDDIEVATIVDNTAVRGKKLNT----- 550
Query: 482 VASGGQHSVILA 493
+GGQ S+ A
Sbjct: 551 AGAGGQFSIFTA 562
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 49/209 (23%)
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTP----IPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+++ G G LGL + V P + + +D + +A G A+ +G +
Sbjct: 146 RVFVCGEGSQGELGLGSAKGTVDVKRPRLNALLAAEDVGVVQVAAGGMHCVALTHDGKVL 205
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV--------------- 411
WG +N +G A GR GLK++ +
Sbjct: 206 TWG---------------VNDQG---ALGRDTTWEGGLKDIDDAKSDCSSDSGSDSGLNP 247
Query: 412 --TEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGM--GNGYQLGNGKEDDI- 463
+ PT +PS ++ I +A G+ SFA+ +G++YGWG GN LG E +
Sbjct: 248 HESTPTALPSDAFPEETIIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGILGFDAETKVQ 307
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P I G + + +A G H++ +
Sbjct: 308 ATPKLIPGLK----KITHIACGDNHALAI 332
>gi|406602412|emb|CCH46028.1| Regulator of chromosome condensation [Wickerhamomyces ciferrii]
Length = 476
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 208/414 (50%), Gaps = 59/414 (14%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDLDNVVEVVVGGMHTVCLT 85
K KT + G G +LGLGP +V + ++D +V+ VGGMHT+ L
Sbjct: 42 KAKTQQLDIFVFGSGSMCELGLGPAAKNKEVKRPRLNPYLKD-KGIVDFAVGGMHTLALD 100
Query: 86 EDGKVYTWGCNDEGALGREAE----------------------GDSEFIPQTVN-LPK-- 120
+ +V++WG ND G LGR+ ++E P V LPK
Sbjct: 101 DKNQVWSWGGNDSGVLGRDTSKVKEQLKDMDDAGSDDDEDGDLNEAESTPGLVEGLPKDL 160
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIAS 179
K VQ++A D+ S LLE+G VYAWG+FR + G +G K + Q TP+K++ I ++AS
Sbjct: 161 KVVQLAATDNLSAVLLENGEVYAWGTFRCNEGILGFKNDITKQSTPVKIDEFKEITQLAS 220
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G DH + L ++G + G +Q QLGR R + RN + LEP E L + +
Sbjct: 221 GKDHILGLDTKGVVFAWGNGQQLQLGR---RISERNK---LKTLEPREFGLA--DVVYIS 272
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+G ++ F I+ G +L +GLN Y Q G SE++ + P ++ L+DKK +A+
Sbjct: 273 SGEFHCFAITKDGKVLTWGLNQYGQCG-VSSELEDG--SLISVPTEVEDLADKKIVQIAA 329
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-------------VTEPTPIPSLQDKT 345
G+HH+LAL+ +G +YAFGR D +G+ P V PT IP+L
Sbjct: 330 GEHHTLALSEDGSVYAFGRIDMFEIGIAKKDLPESTFRDVHGNARSVPVPTKIPNL--PK 387
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+IA G+ S AI +GV++ WG G Y +G G + + + +I D+
Sbjct: 388 TRNIAVGSHHSLAITEDGVVFAWGFGETYAIGLGPAGEDVETPTRIKNTATQDH 441
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 122/309 (39%), Gaps = 65/309 (21%)
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
RS R G SF +P K I T + F+ GS+ GL ++ +
Sbjct: 16 RSTKRVKHTGRSFNSFKNLP-KINEIPKAKTQQLDIFVFGSGSMCELGLGPAAK----NK 70
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-- 327
EV++ P L L DK A G H+LAL+ + +++++G +D G LG
Sbjct: 71 EVKR--------PRLNPYLKDKGIVDFAVGGMHTLALDDKNQVWSWGGNDSGVLGRDTSK 122
Query: 328 --------------------VSEPVTEPTPIPSL-QDKTITSIACGNCVSFAIDSEGVLY 366
++E + P + L +D + +A + +S + G +Y
Sbjct: 123 VKEQLKDMDDAGSDDDEDGDLNEAESTPGLVEGLPKDLKVVQLAATDNLSAVLLENGEVY 182
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
WG R + G LG KN + + TP+ + K IT
Sbjct: 183 AWGTF------------------------RCNEGILGFKN--DITKQSTPVKIDEFKEIT 216
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASG 485
+A G +D++GV++ WG G QLG E + L+ + E ++ V+ ++SG
Sbjct: 217 QLASGKDHILGLDTKGVVFAWGNGQQLQLGRRISERNKLKTL--EPREFGLADVVYISSG 274
Query: 486 GQHSVILAK 494
H + K
Sbjct: 275 EFHCFAITK 283
>gi|296424151|ref|XP_002841613.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637858|emb|CAZ85804.1| unnamed protein product [Tuber melanosporum]
Length = 465
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 205/414 (49%), Gaps = 62/414 (14%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGLGPDV------MERKTFALVEDLDNVVEVVVGGM 79
+VPT + + G GD +LGLGP+V R L+ + +V V +GGM
Sbjct: 32 SVPTRRLN-----IYAFGTGDNAELGLGPEVNAKVVKRPRLNTHLLPEKVGIVAVAIGGM 86
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAE-----GDS-----------------EFIPQTVN 117
H + L+ +GKVY+WG ND+ ALGRE + GD E +P +
Sbjct: 87 HGLALSHEGKVYSWGVNDQYALGRETKYTPPVGDVGSDEDSDSDDEEPLNPLESMPMLIT 146
Query: 118 -LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSG 173
P+ V I+AGDS S+A+ + G VY WG+FR S G +G + IQ P+ L ++
Sbjct: 147 AFPEGTVITNIAAGDSVSIAVTDTGKVYGWGTFRCSDGILGFNEKTRIQSVPVLLPTLKN 206
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IV+++ G DH + LT GN+ G +Q QLGR R R G L P E L R
Sbjct: 207 IVQVSVGTDHVLGLTREGNVFAWGNGQQFQLGR---RVVERTRLNG---LIPREFGLPRH 260
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ V TG Y++F I+ G + A+GLN + Q G D + NT P +++ L + K
Sbjct: 261 QVRYVATGSYHSFAITEDGKVWAWGLNQFGQCGIYDPKHAGEDNTVVPVPTVVQGLIEHK 320
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPI 338
+++G+HHS A+ +G++ +GR D G+LGL + P ++ P +
Sbjct: 321 IVQISAGEHHSAAVTEDGELLVWGRLDGGQLGLDPETLPAEDVVRDVSGKPRYLSTPRAV 380
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILNSEGKI 391
P ++ + I CG + AI EG Y WG G YQ G G E DD + + KI
Sbjct: 381 PDIK---FSFIGCGTHHNIAISREGQAYSWGFGGSYQTGLGPEADDEIKTPTKI 431
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL------KNVSEPVTEPTPIP 339
K+L+D K T + + + LN IYAFG D LGL K V P +P
Sbjct: 23 KALADPKITSVPTRR-----LN----IYAFGTGDNAELGLGPEVNAKVVKRPRLNTHLLP 73
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+ I ++A G A+ EG +Y WG+ + Y L G+E G + + D
Sbjct: 74 --EKVGIVAVAIGGMHGLALSHEGKVYSWGVNDQYAL--GRETKYTPPVGDVGSDEDSDS 129
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWG 448
N E + P I + + T IT+IA G+ VS A+ G +YGWG
Sbjct: 130 DDEEPLNPLE--SMPMLITAFPEGTVITNIAAGDSVSIAVTDTGKVYGWG 177
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG------------REAEGDSEFIPQTVNL 118
+V++ G H+ +TEDG++ WG D G LG R+ G ++ +
Sbjct: 321 IVQISAGEHHSAAVTEDGELLVWGRLDGGQLGLDPETLPAEDVVRDVSGKPRYLSTPRAV 380
Query: 119 PK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
P K I G H++A+ +G Y+WG +G + + KTP K+E+ +
Sbjct: 381 PDIKFSFIGCGTHHNIAISREGQAYSWGFGGSYQTGLGPEADDEIKTPTKIENTA 435
>gi|326470311|gb|EGD94320.1| ran exchange factor Prp20/Pim1 [Trichophyton tonsurans CBS 112818]
Length = 565
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 198/427 (46%), Gaps = 79/427 (18%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + PT K + V CG+G G+LGLG DV + AL+
Sbjct: 129 RKPKPKVAINK--APTQKLR-----VFVCGEGSQGELGLGAAKGTVDVKRPRLNALLAPE 181
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA--EGDSEFIPQT---------- 115
D VV+V GGMH V LT DG+V TWG ND+GALGR+ EG + I
Sbjct: 182 DVGVVQVAAGGMHCVALTHDGRVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDTSSDSGS 241
Query: 116 -----------VNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
+P A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 242 DSGLNPYESTPTAIPSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGIIGFD 301
Query: 158 GE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
E IQ TP + + I +A G +H + + +RG + G +Q QLGR R RN
Sbjct: 302 AETKIQPTPKLISGLKKITHVACGDNHALAIDNRGAVFAWGSGQQNQLGR---RIVERNK 358
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS----QLGEADSEV 271
G L+P E L K+I V G +++F + G + +GLN+Y Q G D E
Sbjct: 359 LNG---LQPREFGLP-KNITHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEA 414
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----- 326
P ++ SL DK + G HH+LA ++G +GR D + GLK
Sbjct: 415 ------VILHPTVVDSLKDKNVVQICGGSHHTLARTTDGDCLVWGRLDGFQSGLKVDTLS 468
Query: 327 ---------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
N + + EPT +P + + +A G S AID+EG + WG YQ G
Sbjct: 469 DSAVIKDDRNRARVLFEPTAVPGFKAE---YVAAGADHSIAIDNEGRAWTWGFSANYQTG 525
Query: 378 NGKEDDI 384
G +DDI
Sbjct: 526 QGTDDDI 532
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 187/432 (43%), Gaps = 111/432 (25%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E V G+V++A+G H V LT G +LT G +Q
Sbjct: 154 SQGELGLGAAKGTVDVKRPRLNALLAPEDV-GVVQVAAGGMHCVALTHDGRVLTWGVNDQ 212
Query: 202 GQLGRIT-----------QRSASRNARRGMSFLEPGE-----VPLKR----KHIDDVFTG 241
G LGR T +S + + S L P E +P I V G
Sbjct: 213 GALGRDTTWEGGLKDIDDAKSDTSSDSGSDSGLNPYESTPTAIPSDAFPEGTVIVQVAAG 272
Query: 242 VYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++F ++ G + +G N +G +A++++Q TP LI L KK T +A
Sbjct: 273 DSSSFALTDDGLVYGWGTFRGNEGIIGFDAETKIQP-------TPKLISGL--KKITHVA 323
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------KTITSIAC 351
G +H+LA+++ G ++A+G +LG + + E + LQ K IT + C
Sbjct: 324 CGDNHALAIDNRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGLPKNITHVGC 378
Query: 352 GNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL---------------------- 385
G+ SFA+ G +YGWG+ + G Q G G ++ ++
Sbjct: 379 GSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVILHPTVVDSLKDKNVVQICGGSH 438
Query: 386 -----NSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPTPIPSLQDKTIT 426
++G +GR D + GLK N + + EPT +P + +
Sbjct: 439 HTLARTTDGDCLVWGRLDGFQSGLKVDTLSDSAVIKDDRNRARVLFEPTAVPGFKAE--- 495
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQ 481
+A G S AID+EG + WG YQ G G +DD I++ + GK+LN
Sbjct: 496 YVAAGADHSIAIDNEGRAWTWGFSANYQTGQGTDDDIEVATIVDNTAVRGKKLNT----- 550
Query: 482 VASGGQHSVILA 493
+GGQ+S+ A
Sbjct: 551 AGAGGQYSIFTA 562
>gi|116201941|ref|XP_001226782.1| hypothetical protein CHGG_08855 [Chaetomium globosum CBS 148.51]
gi|88177373|gb|EAQ84841.1| hypothetical protein CHGG_08855 [Chaetomium globosum CBS 148.51]
Length = 607
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 191/398 (47%), Gaps = 62/398 (15%)
Query: 39 VLTCGQGDTGQLGLG--------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
+ G+G G+LGLG P ++R F +L +V+V GGMH LT+D K+
Sbjct: 185 IFVFGEGTAGELGLGSVRVDGKRPIDVKRPRFNT--NLKGIVQVACGGMHVAALTKDNKI 242
Query: 91 YTWGCNDEGALGREAEGD-----------------------SEFIPQTVNLPK-----KA 122
TWG ND+GALGR+ D E P V++ K
Sbjct: 243 LTWGVNDQGALGRDTTWDGGLRNVEDEDEDSDDEDDTGMNPKESTPAEVDMTDVPEDVKW 302
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGA 181
VQ+ A DS + AL G VY WG+FR + G +G K +Q+TP + +S I ++A+G
Sbjct: 303 VQLVASDSATFALTTTGQVYGWGTFRSNEGILGFSKSVLVQRTPALVPEISKIKQLAAGL 362
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L + + G +Q QL R R R+ + G +P R D + G
Sbjct: 363 NHVLALDEKNKIYAWGAGQQAQLAR---RLLERDDSAALYPTGIGALP-GRAKADKLACG 418
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y++F I +KG ++ +GLNNY++LG D Q G P LI +L + T +A G+
Sbjct: 419 SYHSFVIDTKGRVVGWGLNNYAELGVEDEAGQDGG--FVMRPQLITALEPYEVTCVAGGE 476
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQDKTI 346
HHSLA +G++ +GR D ++G +N + PT +P ++D +
Sbjct: 477 HHSLACTKDGELLTWGRIDGHQVGQPSGSFSESNVIWDERNQPRILVVPTIVPDIKD--V 534
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G SFAI EG +Y WG + YQ G G DDI
Sbjct: 535 VHVAAGTDHSFAITKEGKVYSWGFSSNYQTGQGTTDDI 572
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 174/407 (42%), Gaps = 82/407 (20%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-RNARR--- 218
K P ++ GIV++A G H LT +LT G +QG LGR T RN
Sbjct: 212 KRPRFNTNLKGIVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWDGGLRNVEDEDE 271
Query: 219 --------GMSFLE--PGEV-----PLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNY 261
GM+ E P EV P K + V + +++ G + +G +N
Sbjct: 272 DSDDEDDTGMNPKESTPAEVDMTDVPEDVKWVQLVASDSATFALTTTGQVYGWGTFRSNE 331
Query: 262 SQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
LG + S VQ+ TP L+ +S K LA+G +H LAL+ + KIYA+G
Sbjct: 332 GILGFSKSVLVQR-------TPALVPEIS--KIKQLAAGLNHVLALDEKNKIYAWGAGQQ 382
Query: 321 GRLG---LKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+L L+ PT I +L + +ACG+ SF ID++G + GWG+ N +L
Sbjct: 383 AQLARRLLERDDSAALYPTGIGALPGRAKADKLACGSYHSFVIDTKGRVVGWGLNNYAEL 442
Query: 377 G-----------------------------NGKEDDIL--NSEGKIYAFGRHDYGRLGL- 404
G G E L +G++ +GR D ++G
Sbjct: 443 GVEDEAGQDGGFVMRPQLITALEPYEVTCVAGGEHHSLACTKDGELLTWGRIDGHQVGQP 502
Query: 405 -------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+N + PT +P ++D + +A G SFAI EG +Y WG +
Sbjct: 503 SGSFSESNVIWDERNQPRILVVPTIVPDIKD--VVHVAAGTDHSFAITKEGKVYSWGFSS 560
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
YQ G G DDI EP I+ + + ++ +GGQ+ ++ A + N
Sbjct: 561 NYQTGQGTTDDIKEPTLIDNTAIRDRKIIFAGAGGQYGIVGALAEEN 607
>gi|327292499|ref|XP_003230948.1| ran exchange factor Prp20/Pim1 [Trichophyton rubrum CBS 118892]
gi|326466885|gb|EGD92338.1| ran exchange factor Prp20/Pim1 [Trichophyton rubrum CBS 118892]
Length = 565
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 197/427 (46%), Gaps = 79/427 (18%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + PT K + V CG+G G+LGLG DV + AL+
Sbjct: 129 RKPKPKVVINK--APTQKLR-----VFVCGEGSQGELGLGAAKGTVDVKRPRLNALLAPE 181
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA---------------------- 105
D VV+V GGMH V LT DG+V TWG ND+GALGR+
Sbjct: 182 DVGVVQVAAGGMHCVALTHDGRVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDDSSDSGS 241
Query: 106 -EGDSEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G + + +P A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 242 DSGLNPYESTPTAIPSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGIIGFD 301
Query: 158 GE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ IQ TP + + I+ +A G +H + + +RG + G +Q QLGR R RN
Sbjct: 302 ADTKIQTTPKLISGLKKIIHVACGDNHALAIDNRGAVFAWGSGQQNQLGR---RIVERNK 358
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS----QLGEADSEV 271
G L+P E L K+I V G +++F + G + +GLN+Y Q G D E
Sbjct: 359 LNG---LQPREFGLP-KNIIHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEA 414
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----- 326
P ++ SL DK + G HH+LA +G +GR D + GLK
Sbjct: 415 ------VILHPTVVDSLKDKNIVQICGGSHHTLARTIDGDCLVWGRLDGFQSGLKVDTLP 468
Query: 327 ---------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
N + + EPT +P + + +A G S AID+EG + WG YQ G
Sbjct: 469 ESAVIKDDRNRARVLFEPTAVPGFKAE---YVAAGADHSIAIDNEGRAWTWGFSANYQTG 525
Query: 378 NGKEDDI 384
G +DDI
Sbjct: 526 QGTDDDI 532
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 184/432 (42%), Gaps = 111/432 (25%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E V G+V++A+G H V LT G +LT G +Q
Sbjct: 154 SQGELGLGAAKGTVDVKRPRLNALLAPEDV-GVVQVAAGGMHCVALTHDGRVLTWGVNDQ 212
Query: 202 GQLGRIT--------------QRSASRNARRGMSFLE--PGEVPLKR----KHIDDVFTG 241
G LGR T S+ + G++ E P +P I V G
Sbjct: 213 GALGRDTTWEGGLKDIDDAKSDDSSDSGSDSGLNPYESTPTAIPSDAFPEGTVIVQVAAG 272
Query: 242 VYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++F ++ G + +G N +G +AD+++Q TP LI L KK +A
Sbjct: 273 DSSSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQT-------TPKLISGL--KKIIHVA 323
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------KTITSIAC 351
G +H+LA+++ G ++A+G +LG + + E + LQ K I + C
Sbjct: 324 CGDNHALAIDNRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGLPKNIIHVGC 378
Query: 352 GNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL---------------------- 385
G+ SFA+ G +YGWG+ + G Q G G ++ ++
Sbjct: 379 GSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVILHPTVVDSLKDKNIVQICGGSH 438
Query: 386 -----NSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPTPIPSLQDKTIT 426
+G +GR D + GLK N + + EPT +P + +
Sbjct: 439 HTLARTIDGDCLVWGRLDGFQSGLKVDTLPESAVIKDDRNRARVLFEPTAVPGFKAE--- 495
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQ 481
+A G S AID+EG + WG YQ G G +DDI ++ + GK+LN
Sbjct: 496 YVAAGADHSIAIDNEGRAWTWGFSANYQTGQGTDDDIEVATVVDNTAVRGKKLNT----- 550
Query: 482 VASGGQHSVILA 493
+GGQ+S+ A
Sbjct: 551 AGAGGQYSIFTA 562
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 93/232 (40%), Gaps = 62/232 (26%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE------------------------ 330
+A+G H +AL +G++ +G +D G LG E
Sbjct: 187 QVAAGGMHCVALTHDGRVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDDSSDSGSDSGLN 246
Query: 331 PV-TEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
P + PT IPS + I +A G+ SFA+ +G++YGWG G +
Sbjct: 247 PYESTPTAIPSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRGNE----------- 295
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
G +G ++ T P I L K I +ACG+ + AID+ G ++
Sbjct: 296 -------------GIIGFDADTKIQTTPKLISGL--KKIIHVACGDNHALAIDNRGAVFA 340
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVILAK 494
WG G QLG I+E K+ G Q + ++ V G HS + K
Sbjct: 341 WGSGQQNQLGR----RIVERNKLNGLQPREFGLPKNIIHVGCGSFHSFAVHK 388
>gi|302507508|ref|XP_003015715.1| mitochondrial protein Fmp25, putative [Arthroderma benhamiae CBS
112371]
gi|291179283|gb|EFE35070.1| mitochondrial protein Fmp25, putative [Arthroderma benhamiae CBS
112371]
Length = 565
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 196/427 (45%), Gaps = 79/427 (18%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + PT K + V CG+G G+LGLG DV + AL+
Sbjct: 129 RKPKPKVVINK--APTQKLR-----VFVCGEGSQGELGLGAAKGTVDVKRPRLNALLAPE 181
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA---------------------- 105
D VV+V GGMH V LT DG+V TWG ND+GALGR+
Sbjct: 182 DVGVVQVAAGGMHCVALTHDGRVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDDSSDSGS 241
Query: 106 -EGDSEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G + + +P A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 242 DSGLNPYESTPTAIPSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGIIGFD 301
Query: 158 GE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ IQ TP + + I +A G +H + + +RG + G +Q QLGR R RN
Sbjct: 302 ADTKIQTTPKLISGLKKITHVACGDNHALAIDNRGAVFAWGSGQQNQLGR---RIVERNK 358
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS----QLGEADSEV 271
G L+P E L K+I V G +++F + G + +GLN+Y Q G D E
Sbjct: 359 LNG---LQPREFGLP-KNIVHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEA 414
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----- 326
P ++ SL DK + G HH+LA ++G +GR D + GLK
Sbjct: 415 ------VILHPTIVDSLKDKSIVQICGGSHHTLARTTDGDCLVWGRLDGFQSGLKVDTLP 468
Query: 327 ---------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
N + + EPT +P + +A G S AID+EG + WG YQ G
Sbjct: 469 DSAVIKDDRNRARVLFEPTAVPGFK---ADYVAAGADHSIAIDNEGRAWTWGFSANYQTG 525
Query: 378 NGKEDDI 384
G +DDI
Sbjct: 526 QGTDDDI 532
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 185/432 (42%), Gaps = 111/432 (25%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E V G+V++A+G H V LT G +LT G +Q
Sbjct: 154 SQGELGLGAAKGTVDVKRPRLNALLAPEDV-GVVQVAAGGMHCVALTHDGRVLTWGVNDQ 212
Query: 202 GQLGRIT--------------QRSASRNARRGMSFLE--PGEVPLKR----KHIDDVFTG 241
G LGR T S+ + G++ E P +P I V G
Sbjct: 213 GALGRDTTWEGGLKDIDDAKSDDSSDSGSDSGLNPYESTPTAIPSDAFPEGTVIVQVAAG 272
Query: 242 VYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++F ++ G + +G N +G +AD+++Q TP LI L KK T +A
Sbjct: 273 DSSSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQT-------TPKLISGL--KKITHVA 323
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------KTITSIAC 351
G +H+LA+++ G ++A+G +LG + + E + LQ K I + C
Sbjct: 324 CGDNHALAIDNRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGLPKNIVHVGC 378
Query: 352 GNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL---------------------- 385
G+ SFA+ G +YGWG+ + G Q G G ++ ++
Sbjct: 379 GSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVILHPTIVDSLKDKSIVQICGGSH 438
Query: 386 -----NSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPTPIPSLQDKTIT 426
++G +GR D + GLK N + + EPT +P +
Sbjct: 439 HTLARTTDGDCLVWGRLDGFQSGLKVDTLPDSAVIKDDRNRARVLFEPTAVPGFK---AD 495
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQ 481
+A G S AID+EG + WG YQ G G +DD I++ + GK+LN
Sbjct: 496 YVAAGADHSIAIDNEGRAWTWGFSANYQTGQGTDDDIEVATIVDNTAVRGKKLNT----- 550
Query: 482 VASGGQHSVILA 493
+GGQ+S+ A
Sbjct: 551 AGAGGQYSIFTA 562
>gi|408389507|gb|EKJ68954.1| hypothetical protein FPSE_10879 [Fusarium pseudograminearum CS3096]
Length = 593
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 192/401 (47%), Gaps = 65/401 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERK----------TFALVEDLDNVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG + K L VV++ GGMH V LT D
Sbjct: 153 VYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLAAATTGVVQISCGGMHAVALTHDN 212
Query: 89 KVYTWGCNDEGALGREAEGD------------------------SEFIPQTVN----LP- 119
K+ TWG ND+GALGR+ D E P V+ P
Sbjct: 213 KILTWGVNDQGALGRDTNWDGGLRDMDSAEDSDSDDEDDSGINPKESTPTAVDDEFFAPG 272
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIA 178
K VQ+ A DS S L EDG VY WG+FR S G +G IQ TPL ++ + I ++
Sbjct: 273 TKFVQVVASDSASFTLTEDGRVYGWGTFRSSDGILGFSETIKIQPTPLLIKDLKNIKALS 332
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G++H + L +GN++ GC +Q QLGR R RN MS L P V L R I +
Sbjct: 333 AGSNHILALDHKGNVVAWGCGQQNQLGR---RIIERNK---MSSLIPQGVGLPRGKIAKI 386
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y++F I +G + +GLNN+ ++G + + + P + L D T +
Sbjct: 387 ACGSYHSFAIDKEGVVYGWGLNNFGEIGVESNAGED--DAVILRPAKLTYLDDYNITEID 444
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLK--NVSEP------------VTEPTPIPSLQD 343
G+HHSLA + +G + +GR D ++G + +SE + +PT P ++D
Sbjct: 445 GGEHHSLACSDKGDLLTWGRVDGYQVGFEFDKLSEENSIYDERGNARILFKPTIQPDVKD 504
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I S+A G +FAI S G +Y WG + YQ G G DDI
Sbjct: 505 --IVSVAAGTDNNFAISSNGTVYSWGFSSNYQTGQGTIDDI 543
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 191/449 (42%), Gaps = 71/449 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK----------KAVQISAGDSHSVALLEDG 139
VY +G G LG ++ + P V P+ VQIS G H+VAL D
Sbjct: 153 VYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLAAATTGVVQISCGGMHAVALTHDN 212
Query: 140 TVYAWGSF------RDSHGSMGLKGE--------------GI---QKTPLKLESVSGIVK 176
+ WG RD++ GL+ GI + TP ++
Sbjct: 213 KILTWGVNDQGALGRDTNWDGGLRDMDSAEDSDSDDEDDSGINPKESTPTAVDDEF---- 268
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF-----LEPGEVPLK 231
A G ++ S T + GR+ R++ + F ++P + +K
Sbjct: 269 FAPGTKFVQVVASDSASFTLT-----EDGRVYGWGTFRSSDGILGFSETIKIQPTPLLIK 323
Query: 232 R-KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G + + KG+++A+G +QLG E K + P + L
Sbjct: 324 DLKNIKALSAGSNHILALDHKGNVVAWGCGQQNQLGRRIIERNKMSS---LIPQGV-GLP 379
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEP---VTEPTPIPSLQDKT 345
K +A G +HS A++ EG +Y +G +++G +G++ N E + P + L D
Sbjct: 380 RGKIAKIACGSYHSFAIDKEGVVYGWGLNNFGEIGVESNAGEDDAVILRPAKLTYLDDYN 439
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
IT I G S A +G L WG +GYQ+G E D L+ E IY R+ K
Sbjct: 440 ITEIDGGEHHSLACSDKGDLLTWGRVDGYQVG--FEFDKLSEENSIYD--ERGNARILFK 495
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
PT P ++D I S+A G +FAI S G +Y WG + YQ G G DDI
Sbjct: 496 --------PTIQPDVKD--IVSVAAGTDNNFAISSNGTVYSWGFSSNYQTGQGTIDDIHT 545
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P I+ + ++ +GGQ+SV++ +
Sbjct: 546 PTLIDNTAIRGKKIIGAGAGGQYSVLIGE 574
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 37 GVVLTCGQGDTGQLGL----GPD--VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
GVV G + G++G+ G D V+ R D N+ E+ G H++ ++ G +
Sbjct: 400 GVVYGWGLNNFGEIGVESNAGEDDAVILRPAKLTYLDDYNITEIDGGEHHSLACSDKGDL 459
Query: 91 YTWGCNDEGALGREAEGDSE--------------FIPQTVNLPKKAVQISAGDSHSVALL 136
TWG D +G E + SE F P K V ++AG ++ A+
Sbjct: 460 LTWGRVDGYQVGFEFDKLSEENSIYDERGNARILFKPTIQPDVKDIVSVAAGTDNNFAIS 519
Query: 137 EDGTVYAWG 145
+GTVY+WG
Sbjct: 520 SNGTVYSWG 528
>gi|154273022|ref|XP_001537363.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415875|gb|EDN11219.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 552
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 195/408 (47%), Gaps = 83/408 (20%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALV-EDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV + L+ D VV + GGMH V LT D K+ T
Sbjct: 128 VYVCGEGSSGELGLGAAKNVVDVKRPRLNPLLPADKVGVVHIATGGMHCVALTHDNKLLT 187
Query: 93 WGCNDEGALGREAEGD-----------------------------------SEFIPQTVN 117
WG ND+GALGR+ D SE+ P+
Sbjct: 188 WGVNDQGALGRDTTWDGGYKDIKEGDEDDSDSDSDSDSGLNPLESTPAAVPSEYFPEDTV 247
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVK 176
VQ++A DS S AL + G+VY WG+FR + G +G GE +Q+TP+ L ++ I
Sbjct: 248 F----VQVAASDSASFALTDVGSVYGWGTFRSNDGILGFDGESTVQRTPVLLPTLKKIKS 303
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHI 235
I GA+H + L +G++ G +Q QLGR I +R+ ++ L+P E L K++
Sbjct: 304 ITCGANHVLALNDKGSVFAWGSGQQNQLGRRIIERTK-------INGLQPREFGLP-KNM 355
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQ----LGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ G Y++F I G + A+GLN++ + +G DSE P +++SL D
Sbjct: 356 VGLGCGSYHSFAIHKSGKVYAWGLNSFGETGIRMGAGDSEA------AILHPLVVESLKD 409
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPT 336
K + G HHSLAL ++G+ AFGR D + GLK N + PT
Sbjct: 410 KDIIQICGGAHHSLALTAKGECLAFGRLDGFQTGLKIDSLPESSIIRDDRNAPRILITPT 469
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
IP + I G+ S AID +G + WG YQ G G ++DI
Sbjct: 470 AIPGID---ACHIGSGSEHSIAIDKDGRAWSWGFSANYQTGQGTDEDI 514
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 173/408 (42%), Gaps = 103/408 (25%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT---------------Q 209
PL G+V IA+G H V LT LLT G +QG LGR T
Sbjct: 157 PLLPADKVGVVHIATGGMHCVALTHDNKLLTWGVNDQGALGRDTTWDGGYKDIKEGDEDD 216
Query: 210 RSASRNARRGMSFLE--PGEVPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NN 260
+ ++ G++ LE P VP + D VF V + ++ GS+ +G +N
Sbjct: 217 SDSDSDSDSGLNPLESTPAAVPSEYFPEDTVFVQVAASDSASFALTDVGSVYGWGTFRSN 276
Query: 261 YSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
LG + +S VQ+ TP L+ +L KK + G +H LALN +G ++A+G
Sbjct: 277 DGILGFDGESTVQR-------TPVLLPTL--KKIKSITCGANHVLALNDKGSVFAWGSGQ 327
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN- 372
+LG + + E T I LQ K + + CG+ SFAI G +Y WG+ +
Sbjct: 328 QNQLGRR-----IIERTKINGLQPREFGLPKNMVGLGCGSYHSFAIHKSGKVYAWGLNSF 382
Query: 373 ---GYQLGNG---------------KEDDI------------LNSEGKIYAFGRHDYGRL 402
G ++G G K+ DI L ++G+ AFGR D +
Sbjct: 383 GETGIRMGAGDSEAAILHPLVVESLKDKDIIQICGGAHHSLALTAKGECLAFGRLDGFQT 442
Query: 403 GLK--------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
GLK N + PT IP + I G+ S AID +G + WG
Sbjct: 443 GLKIDSLPESSIIRDDRNAPRILITPTAIPGID---ACHIGSGSEHSIAIDKDGRAWSWG 499
Query: 449 MGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++D I+E + GK+LN +GGQ+SV
Sbjct: 500 FSANYQTGQGTDEDIEVASIVENTAVRGKRLN-----WADAGGQYSVF 542
>gi|440639174|gb|ELR09093.1| hypothetical protein GMDG_03677 [Geomyces destructans 20631-21]
Length = 568
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 194/401 (48%), Gaps = 66/401 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTF------ALVEDLD----NVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG ++ K L E+L VV++ VGGMH LT D
Sbjct: 145 VYVFGEGTSGELGLGNKTIDNKKPIDVKRPRLNENLSASKVGVVQISVGGMHCAALTHDN 204
Query: 89 KVYTWGCNDEGALGRE-----------------AEGDS-------EFIPQTVN---LPKK 121
K+ TWG ND+GALGR+ +E D E P V+ P+
Sbjct: 205 KILTWGVNDQGALGRDTKWEGGLKDMDDGIDSGSESDDEDAMNPRESTPAAVDPKHFPEG 264
Query: 122 AV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIA 178
V Q+ A DS + + DG+V+ WG+FR + G +G E +Q TP+K+ + I ++
Sbjct: 265 IVFTQVCASDSATFVVTADGSVWGWGTFRSNDGILGFTPEIMVQNTPMKIPELKKITTLS 324
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+GA+H + L ++ N+ G +Q QLGR R R G L P E L R I+ V
Sbjct: 325 AGANHILALDAKNNVWAWGSGQQNQLGR---RVVERTRTGG---LIPREFGLPRGRIEQV 378
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
TG Y++F +S G + A+GLNN+ + G + + N P ++ L +
Sbjct: 379 ATGAYHSFAVSKDGRVWAWGLNNFGECGIVEGAGED--NAVIPKPTVVTELKPYNIKEIT 436
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQD 343
G HHS+A +G++ A+GR D G+LG+ P VT P +P ++
Sbjct: 437 GGGHHSIACTDKGELLAWGRSDGGQLGVDISKVPKEHITFDERENPRMVTVPVVVPGIKA 496
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
T +A G SFA+D+EG Y WG YQ G G +DD+
Sbjct: 497 AT---VAAGGDNSFAVDTEGKAYSWGFSANYQTGQGSDDDV 534
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 187/440 (42%), Gaps = 107/440 (24%)
Query: 141 VYAWGSFRDSHGSMGLKGEGI-QKTPLKLE----------SVSGIVKIASGADHFVMLTS 189
VY +G + G +GL + I K P+ ++ S G+V+I+ G H LT
Sbjct: 145 VYVFG--EGTSGELGLGNKTIDNKKPIDVKRPRLNENLSASKVGVVQISVGGMHCAALTH 202
Query: 190 RGNLLTAGCPEQGQLGRITQ-------------RSASRNARRGMSFLEPGEVPLKRKHID 236
+LT G +QG LGR T+ + + M+ E + KH
Sbjct: 203 DNKILTWGVNDQGALGRDTKWEGGLKDMDDGIDSGSESDDEDAMNPRESTPAAVDPKHFP 262
Query: 237 D--VFTGV----YNTFI-SSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIK 286
+ VFT V TF+ ++ GS+ +G +N LG + VQ NT P L
Sbjct: 263 EGIVFTQVCASDSATFVVTADGSVWGWGTFRSNDGILGFTPEIMVQ---NTPMKIPEL-- 317
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS---LQD 343
KK T L++G +H LAL+++ ++A+G +LG + V E IP L
Sbjct: 318 ----KKITTLSAGANHILALDAKNNVWAWGSGQQNQLG-RRVVERTRTGGLIPREFGLPR 372
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL-------------- 385
I +A G SFA+ +G ++ WG+ N G G G+++ ++
Sbjct: 373 GRIEQVATGAYHSFAVSKDGRVWAWGLNNFGECGIVEGAGEDNAVIPKPTVVTELKPYNI 432
Query: 386 -------------NSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIP 418
+G++ A+GR D G+LG+ P VT P +P
Sbjct: 433 KEITGGGHHSIACTDKGELLAWGRSDGGQLGVDISKVPKEHITFDERENPRMVTVPVVVP 492
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-----LEPMKIEGKQ 473
++ T+ A G SFA+D+EG Y WG YQ G G +DD+ ++ + GK+
Sbjct: 493 GIKAATV---AAGGDNSFAVDTEGKAYSWGFSANYQTGQGSDDDVDIATHIDNTAVRGKK 549
Query: 474 LNNYTVLQVASGGQHSVILA 493
LN +GGQ S++ A
Sbjct: 550 LN-----FAGAGGQFSILTA 564
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 110/291 (37%), Gaps = 66/291 (22%)
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF--TML 296
F N + K + FG +LG + + P L ++LS K +
Sbjct: 131 FGPTINKAPTQKLDVYVFGEGTSGELGLGNKTIDNKKPIDVKRPRLNENLSASKVGVVQI 190
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPV--------------TE 334
+ G H AL + KI +G +D G LG LK++ + + E
Sbjct: 191 SVGGMHCAALTHDNKILTWGVNDQGALGRDTKWEGGLKDMDDGIDSGSESDDEDAMNPRE 250
Query: 335 PTPIPSLQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
TP ++ K T + + +F + ++G ++GWG
Sbjct: 251 STPA-AVDPKHFPEGIVFTQVCASDSATFVVTADGSVWGWGTF----------------- 292
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
R + G LG E + + TP+ + K IT+++ G A+D++ ++ WG
Sbjct: 293 -------RSNDGILGF--TPEIMVQNTPMKIPELKKITTLSAGANHILALDAKNNVWAWG 343
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNY-----TVLQVASGGQHSVILAK 494
G QLG ++E + G + + QVA+G HS ++K
Sbjct: 344 SGQQNQLGR----RVVERTRTGGLIPREFGLPRGRIEQVATGAYHSFAVSK 390
>gi|171681784|ref|XP_001905835.1| hypothetical protein [Podospora anserina S mat+]
gi|170940851|emb|CAP66501.1| unnamed protein product [Podospora anserina S mat+]
Length = 592
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 197/396 (49%), Gaps = 58/396 (14%)
Query: 39 VLTCGQGDTGQLGLGP------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G G+LGLG ++ K L ++ NVV++ GGMH LT+D K++T
Sbjct: 168 MFVFGEGTAGELGLGSVKVDGKKPIDVKRPRLNPNVSNVVQIACGGMHVAALTKDNKIFT 227
Query: 93 WGCNDEGALGREAEGD-----------------------SEFIPQTVN---LPK--KAVQ 124
WG ND+GALGR+ D E P ++ LP+ + VQ
Sbjct: 228 WGVNDQGALGRDTTWDGGLRDVEDEDDDSDDEDDTGMNPKESTPAEIDTSGLPEGIEWVQ 287
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADH 183
+ A DS + AL G VY WG+FR + G +G + GIQ+TP + +S I ++A+G +H
Sbjct: 288 VVASDSATFALTTTGQVYGWGTFRSNEGVLGFSRSVGIQRTPAHVPELSKIKQLAAGLNH 347
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L + + G +Q QL R R R+ + G +P + K + + G Y
Sbjct: 348 ILALDEKNKIYAWGAGQQAQLAR---RLLERDDTAALYPAGVGSLPGRAKAV-KLACGSY 403
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ F I +KG ++++GLNNY++ G DS G P +++SLS + +A G+HH
Sbjct: 404 HCFVIDTKGRVISWGLNNYAECGHEDSVGVDGG--YVMRPQIVESLSGYEIADIAGGEHH 461
Query: 303 SLALNSEGKIYAFGRHDYGRLG------------LKNVSEP--VTEPTPIPSLQDKTITS 348
SLA ++GK+ +GR D ++G + +P + PT IP ++D +
Sbjct: 462 SLACTTDGKLLTWGRIDGHQVGQPTGSFTEDNTIYDDRQKPRILVVPTEIPEVKD--VVQ 519
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G SFA+ +G +Y WG YQ G G DDI
Sbjct: 520 VAAGTDHSFAVTKDGKVYSWGFSANYQTGQGTTDDI 555
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 170/403 (42%), Gaps = 82/403 (20%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------QR 210
K P +VS +V+IA G H LT + T G +QG LGR T
Sbjct: 195 KRPRLNPNVSNVVQIACGGMHVAALTKDNKIFTWGVNDQGALGRDTTWDGGLRDVEDEDD 254
Query: 211 SASRNARRGMSFLE--PGEV-----PLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNY 261
+ GM+ E P E+ P + + V + +++ G + +G +N
Sbjct: 255 DSDDEDDTGMNPKESTPAEIDTSGLPEGIEWVQVVASDSATFALTTTGQVYGWGTFRSNE 314
Query: 262 SQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
LG + S +Q+ TP + LS K LA+G +H LAL+ + KIYA+G
Sbjct: 315 GVLGFSRSVGIQR-------TPAHVPELS--KIKQLAAGLNHILALDEKNKIYAWGAGQQ 365
Query: 321 GRLGLKNVSEPVTE---PTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGN---- 372
+L + + T P + SL + +ACG+ F ID++G + WG+ N
Sbjct: 366 AQLARRLLERDDTAALYPAGVGSLPGRAKAVKLACGSYHCFVIDTKGRVISWGLNNYAEC 425
Query: 373 -----------------------GYQLGN--GKEDDIL--NSEGKIYAFGRHDYGRLG-- 403
GY++ + G E L ++GK+ +GR D ++G
Sbjct: 426 GHEDSVGVDGGYVMRPQIVESLSGYEIADIAGGEHHSLACTTDGKLLTWGRIDGHQVGQP 485
Query: 404 ----------LKNVSEP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+ +P + PT IP ++D + +A G SFA+ +G +Y WG
Sbjct: 486 TGSFTEDNTIYDDRQKPRILVVPTEIPEVKD--VVQVAAGTDHSFAVTKDGKVYSWGFSA 543
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
YQ G G DDI P I+ + + ++ +GGQ+ ++ A+
Sbjct: 544 NYQTGQGTTDDIESPTLIDNTAIRDRKIVFAGAGGQYGIVAAE 586
>gi|46127591|ref|XP_388349.1| hypothetical protein FG08173.1 [Gibberella zeae PH-1]
Length = 594
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 192/401 (47%), Gaps = 65/401 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERK----------TFALVEDLDNVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG + K L VV++ GGMH V LT D
Sbjct: 154 VYVFGEGSSGELGLGSKRINNKKPIDVKRPRLNDNLAAATTGVVQISCGGMHAVALTHDN 213
Query: 89 KVYTWGCNDEGALGREAEGD------------------------SEFIPQTVN----LP- 119
K+ TWG ND+GALGR+ D E P V+ P
Sbjct: 214 KILTWGVNDQGALGRDTTWDGGLRDMDSAEDSDSDDEDDSGINPKESTPTAVDDEFFAPG 273
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIA 178
K VQ+ A DS S L EDG VY WG+FR S G +G IQ TPL ++ + I ++
Sbjct: 274 TKFVQVVASDSASFTLTEDGRVYGWGTFRSSDGILGFSETIKIQPTPLLIKDLKNIKALS 333
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G++H + L +GN++ GC +Q QLGR R RN MS L P V L R I +
Sbjct: 334 AGSNHILALDHKGNVVAWGCGQQNQLGR---RIIERNK---MSSLIPQGVGLPRGKIAKI 387
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y++F I +G + +GLNN+ ++G + + + P + L D T +
Sbjct: 388 ACGSYHSFAIDKEGVVYGWGLNNFGEIGVESNAGED--DAVILRPAKLTYLDDYNITEID 445
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLK--NVSEP------------VTEPTPIPSLQD 343
G+HHSLA + +G + +GR D ++G + +SE + +PT P ++D
Sbjct: 446 GGEHHSLACSDKGDLLTWGRVDGYQVGFEFDKLSEENSIYDERGNARILFKPTIQPDVKD 505
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I S+A G +FAI S G +Y WG + YQ G G +DI
Sbjct: 506 --IVSVAAGTDNNFAISSNGTVYSWGFSSNYQTGQGTIEDI 544
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 190/449 (42%), Gaps = 71/449 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK----------KAVQISAGDSHSVALLEDG 139
VY +G G LG ++ + P V P+ VQIS G H+VAL D
Sbjct: 154 VYVFGEGSSGELGLGSKRINNKKPIDVKRPRLNDNLAAATTGVVQISCGGMHAVALTHDN 213
Query: 140 TVYAWGSF------RDSHGSMGLKGE--------------GI---QKTPLKLESVSGIVK 176
+ WG RD+ GL+ GI + TP ++
Sbjct: 214 KILTWGVNDQGALGRDTTWDGGLRDMDSAEDSDSDDEDDSGINPKESTPTAVDDEF---- 269
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF-----LEPGEVPLK 231
A G ++ S T + GR+ R++ + F ++P + +K
Sbjct: 270 FAPGTKFVQVVASDSASFTLT-----EDGRVYGWGTFRSSDGILGFSETIKIQPTPLLIK 324
Query: 232 R-KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G + + KG+++A+G +QLG E K + P + L
Sbjct: 325 DLKNIKALSAGSNHILALDHKGNVVAWGCGQQNQLGRRIIERNKMSS---LIPQGV-GLP 380
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEP---VTEPTPIPSLQDKT 345
K +A G +HS A++ EG +Y +G +++G +G++ N E + P + L D
Sbjct: 381 RGKIAKIACGSYHSFAIDKEGVVYGWGLNNFGEIGVESNAGEDDAVILRPAKLTYLDDYN 440
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
IT I G S A +G L WG +GYQ+G E D L+ E IY R+ K
Sbjct: 441 ITEIDGGEHHSLACSDKGDLLTWGRVDGYQVG--FEFDKLSEENSIY--DERGNARILFK 496
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
PT P ++D I S+A G +FAI S G +Y WG + YQ G G +DI
Sbjct: 497 --------PTIQPDVKD--IVSVAAGTDNNFAISSNGTVYSWGFSSNYQTGQGTIEDIHT 546
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P I+ + ++ +GGQ+SV++ +
Sbjct: 547 PTLIDNTAIRGKKIIGAGAGGQYSVLIGE 575
>gi|226288490|gb|EEH44002.1| RCC1 domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 571
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 195/400 (48%), Gaps = 68/400 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV++ GGMH V LT D K+ T
Sbjct: 148 VYVCGEGSSGELGLGAAKNVVDVKRPRLNPHLRADTVGVVQIAAGGMHCVALTHDNKILT 207
Query: 93 WGCNDEGALGREAEGD-------------------------SEFIPQTVN---LPKKAV- 123
WG ND+GALGR+ D E P V PK V
Sbjct: 208 WGVNDQGALGRDTIWDGGMKDIEDDANDSDSDSNSGSGLNPRECTPTAVPSEYFPKDTVF 267
Query: 124 -QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGA 181
Q+SA DS S AL + GTVY WG+FR + G +G +Q+TP + +++ I I GA
Sbjct: 268 VQVSASDSASFALTDVGTVYGWGTFRGNDGILGFDSNTKVQRTPTLITTLTKIKTIICGA 327
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L +G++ + G +Q QLGR R RN G L+P E L + + + G
Sbjct: 328 NHVLALNDKGSVYSWGSGQQNQLGR---RIIERNKLNG---LQPREFGLPKNMVG-LGCG 380
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNT--CFFTPHLIKSLSDKKFTMLAS 298
Y++F I G + A+GLN++ + G VQ +G++ P +++SL DK +
Sbjct: 381 SYHSFAIHKSGKVYAWGLNSFGETGI----VQGAGDSDAAVLHPAVVESLLDKDVVQVCG 436
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDK 344
G HHSLAL ++G+ AFGR D + GLK S P + PT IP +
Sbjct: 437 GSHHSLALTAKGECLAFGRLDGFQTGLKIDSLPEESIIRDDRNKPRILVTPTAIPGVD-- 494
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G+ S AID +G + WG YQ G G ++DI
Sbjct: 495 -ACHVATGSDHSIAIDKDGHAWSWGFSANYQTGQGNDEDI 533
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 172/406 (42%), Gaps = 103/406 (25%)
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRSASR 214
L+ ++V G+V+IA+G H V LT +LT G +QG LGR T + S
Sbjct: 179 LRADTV-GVVQIAAGGMHCVALTHDNKILTWGVNDQGALGRDTIWDGGMKDIEDDANDSD 237
Query: 215 NARRGMSFLEPGE-----VPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYS 262
+ S L P E VP + D VF V + ++ G++ +G N
Sbjct: 238 SDSNSGSGLNPRECTPTAVPSEYFPKDTVFVQVSASDSASFALTDVGTVYGWGTFRGNDG 297
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG +++++VQ+ TP LI +L+ K + G +H LALN +G +Y++G
Sbjct: 298 ILGFDSNTKVQR-------TPTLITTLT--KIKTIICGANHVLALNDKGSVYSWGSGQQN 348
Query: 322 RLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN--- 372
+LG + + E + LQ K + + CG+ SFAI G +Y WG+ +
Sbjct: 349 QLGRR-----IIERNKLNGLQPREFGLPKNMVGLGCGSYHSFAIHKSGKVYAWGLNSFGE 403
Query: 373 -GYQLGNGKED---------------DI------------LNSEGKIYAFGRHDYGRLGL 404
G G G D D+ L ++G+ AFGR D + GL
Sbjct: 404 TGIVQGAGDSDAAVLHPAVVESLLDKDVVQVCGGSHHSLALTAKGECLAFGRLDGFQTGL 463
Query: 405 KNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
K S P + PT IP + +A G+ S AID +G + WG
Sbjct: 464 KIDSLPEESIIRDDRNKPRILVTPTAIPGVD---ACHVATGSDHSIAIDKDGHAWSWGFS 520
Query: 451 NGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++D I+E + GK+LN GGQ S+
Sbjct: 521 ANYQTGQGNDEDIEVASIVENTAVRGKKLN-----WADGGGQFSIF 561
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 62/231 (26%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVTE------------- 334
+A+G H +AL + KI +G +D G LG +K++ + +
Sbjct: 189 IAAGGMHCVALTHDNKILTWGVNDQGALGRDTIWDGGMKDIEDDANDSDSDSNSGSGLNP 248
Query: 335 ----PTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
PT +PS +D ++ + SFA+ G +YGWG G
Sbjct: 249 RECTPTAVPSEYFPKDTVFVQVSASDSASFALTDVGTVYGWGTFRG-------------- 294
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+ G LG + ++ PT I +L I +I CG A++ +G +Y W
Sbjct: 295 ----------NDGILGFDSNTKVQRTPTLITTLTK--IKTIICGANHVLALNDKGSVYSW 342
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVILAK 494
G G QLG I+E K+ G Q + ++ + G HS + K
Sbjct: 343 GSGQQNQLGR----RIIERNKLNGLQPREFGLPKNMVGLGCGSYHSFAIHK 389
>gi|225681362|gb|EEH19646.1| regulator of chromosome condensation [Paracoccidioides brasiliensis
Pb03]
Length = 571
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 195/400 (48%), Gaps = 68/400 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV++ GGMH V LT D K+ T
Sbjct: 148 VYVCGEGSSGELGLGAAKNVVDVKRPRLNPHLRADTVGVVQIAAGGMHCVALTHDNKILT 207
Query: 93 WGCNDEGALGREAEGD-------------------------SEFIPQTVN---LPKKAV- 123
WG ND+GALGR+ D E P V PK V
Sbjct: 208 WGVNDQGALGRDTIWDGGMKDIEDDANDSDSDSNSGSGLNPRECTPTAVPSEYFPKDTVF 267
Query: 124 -QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGA 181
Q+SA DS S AL + GTVY WG+FR + G +G +Q+TP + +++ I I GA
Sbjct: 268 VQVSASDSASFALTDVGTVYGWGTFRGNDGILGFDSNTKVQRTPTLITTLTKIKTIICGA 327
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L +G++ + G +Q QLGR R RN G L+P E L + + + G
Sbjct: 328 NHVLALNDKGSVYSWGSGQQNQLGR---RIIERNKLNG---LQPREFGLPKNMVG-LGCG 380
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNT--CFFTPHLIKSLSDKKFTMLAS 298
Y++F I G + A+GLN++ + G VQ +G++ P +++SL DK +
Sbjct: 381 SYHSFAIHKSGKVYAWGLNSFGETGI----VQGAGDSDAAVLHPAVVESLLDKDVVQVCG 436
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDK 344
G HHSLAL ++G+ AFGR D + GLK S P + PT IP +
Sbjct: 437 GSHHSLALTAKGECLAFGRLDGFQTGLKIDSLPEESIIRDDRNKPRILVTPTAIPGVD-- 494
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G+ S AID +G + WG YQ G G ++DI
Sbjct: 495 -ACHVATGSDHSIAIDKDGHAWSWGFSANYQTGQGTDEDI 533
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 172/406 (42%), Gaps = 103/406 (25%)
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRSASR 214
L+ ++V G+V+IA+G H V LT +LT G +QG LGR T + S
Sbjct: 179 LRADTV-GVVQIAAGGMHCVALTHDNKILTWGVNDQGALGRDTIWDGGMKDIEDDANDSD 237
Query: 215 NARRGMSFLEPGE-----VPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYS 262
+ S L P E VP + D VF V + ++ G++ +G N
Sbjct: 238 SDSNSGSGLNPRECTPTAVPSEYFPKDTVFVQVSASDSASFALTDVGTVYGWGTFRGNDG 297
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG +++++VQ+ TP LI +L+ K + G +H LALN +G +Y++G
Sbjct: 298 ILGFDSNTKVQR-------TPTLITTLT--KIKTIICGANHVLALNDKGSVYSWGSGQQN 348
Query: 322 RLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN--- 372
+LG + + E + LQ K + + CG+ SFAI G +Y WG+ +
Sbjct: 349 QLGRR-----IIERNKLNGLQPREFGLPKNMVGLGCGSYHSFAIHKSGKVYAWGLNSFGE 403
Query: 373 -GYQLGNGKED---------------DI------------LNSEGKIYAFGRHDYGRLGL 404
G G G D D+ L ++G+ AFGR D + GL
Sbjct: 404 TGIVQGAGDSDAAVLHPAVVESLLDKDVVQVCGGSHHSLALTAKGECLAFGRLDGFQTGL 463
Query: 405 KNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
K S P + PT IP + +A G+ S AID +G + WG
Sbjct: 464 KIDSLPEESIIRDDRNKPRILVTPTAIPGVD---ACHVATGSDHSIAIDKDGHAWSWGFS 520
Query: 451 NGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++D I+E + GK+LN GGQ S+
Sbjct: 521 ANYQTGQGTDEDIEVASIVENTAVRGKKLN-----WADGGGQFSIF 561
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 62/231 (26%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVTE------------- 334
+A+G H +AL + KI +G +D G LG +K++ + +
Sbjct: 189 IAAGGMHCVALTHDNKILTWGVNDQGALGRDTIWDGGMKDIEDDANDSDSDSNSGSGLNP 248
Query: 335 ----PTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
PT +PS +D ++ + SFA+ G +YGWG G
Sbjct: 249 RECTPTAVPSEYFPKDTVFVQVSASDSASFALTDVGTVYGWGTFRG-------------- 294
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+ G LG + ++ PT I +L I +I CG A++ +G +Y W
Sbjct: 295 ----------NDGILGFDSNTKVQRTPTLITTLTK--IKTIICGANHVLALNDKGSVYSW 342
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVILAK 494
G G QLG I+E K+ G Q + ++ + G HS + K
Sbjct: 343 GSGQQNQLGR----RIIERNKLNGLQPREFGLPKNMVGLGCGSYHSFAIHK 389
>gi|367030153|ref|XP_003664360.1| hypothetical protein MYCTH_2307107 [Myceliophthora thermophila ATCC
42464]
gi|347011630|gb|AEO59115.1| hypothetical protein MYCTH_2307107 [Myceliophthora thermophila ATCC
42464]
Length = 619
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 191/396 (48%), Gaps = 58/396 (14%)
Query: 39 VLTCGQGDTGQLGLGP------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G G+LGLG ++ K L +L VV+V GGMH LT D K+ T
Sbjct: 198 IFVFGEGTAGELGLGSVRVDGKKPIDVKRPRLNPNLKGVVQVACGGMHVAALTIDNKILT 257
Query: 93 WGCNDEGALGREAEGD-----------------------SEFIP---QTVNLPK--KAVQ 124
WG ND+GALGR+ + E P T N+P K VQ
Sbjct: 258 WGVNDQGALGRDTTWEGGLRDVDDEDEDSEDGDDTGMNPKESTPGEIDTSNIPHDVKWVQ 317
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADH 183
+ A DS + AL G VY WG+FR + G +G + IQ+TP + +S I ++A+G +H
Sbjct: 318 VVASDSATFALTTTGQVYGWGTFRSNEGVLGFSRNVLIQRTPTLVPELSRIKQLAAGLNH 377
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L + + G +Q QL R R R+ + G +P R + + G Y
Sbjct: 378 VLALDDKNKVYAWGAGQQAQLAR---RLLERDDSAALYPTGIGSLP-GRAKVAKLACGSY 433
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++F I +KG ++ +GLNNY++LG D Q G P LIK+L + T +A G+HH
Sbjct: 434 HSFVIDTKGRVIGWGLNNYAELGVEDEAGQDGG--FVMRPQLIKALEPYEITCIAGGEHH 491
Query: 303 SLALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQDKTITS 348
SLA + G++ +GR D ++G +N + PT +P ++D +
Sbjct: 492 SLACSKNGELLTWGRIDGHQVGQPSGSFSEDNTIWDERNKPRILVVPTVVPDIKD--VVH 549
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G SFAI ++G +Y WG YQ G G DDI
Sbjct: 550 VAAGTDHSFAITADGKVYSWGFSANYQTGQGTTDDI 585
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 173/404 (42%), Gaps = 80/404 (19%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------QR 210
K P ++ G+V++A G H LT +LT G +QG LGR T
Sbjct: 225 KRPRLNPNLKGVVQVACGGMHVAALTIDNKILTWGVNDQGALGRDTTWEGGLRDVDDEDE 284
Query: 211 SASRNARRGMSFLE--PGEV-----PLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNY 261
+ GM+ E PGE+ P K + V + +++ G + +G +N
Sbjct: 285 DSEDGDDTGMNPKESTPGEIDTSNIPHDVKWVQVVASDSATFALTTTGQVYGWGTFRSNE 344
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG + + + + TP L+ LS + LA+G +H LAL+ + K+YA+G
Sbjct: 345 GVLGFSRNVLIQR------TPTLVPELS--RIKQLAAGLNHVLALDDKNKVYAWGAGQQA 396
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+L L+ PT I SL + + +ACG+ SF ID++G + GWG+ N +LG
Sbjct: 397 QLARRLLERDDSAALYPTGIGSLPGRAKVAKLACGSYHSFVIDTKGRVIGWGLNNYAELG 456
Query: 378 -----------------------------NGKEDDIL--NSEGKIYAFGRHDYGRLGL-- 404
G E L + G++ +GR D ++G
Sbjct: 457 VEDEAGQDGGFVMRPQLIKALEPYEITCIAGGEHHSLACSKNGELLTWGRIDGHQVGQPS 516
Query: 405 ------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+N + PT +P ++D + +A G SFAI ++G +Y WG
Sbjct: 517 GSFSEDNTIWDERNKPRILVVPTVVPDIKD--VVHVAAGTDHSFAITADGKVYSWGFSAN 574
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YQ G G DDI P IE + + ++ +GGQ+ ++ A P+
Sbjct: 575 YQTGQGTTDDIESPTLIENSAIRDRKIVFAGAGGQYGIVGALPE 618
>gi|325092204|gb|EGC45514.1| pheromone response pathway component SRM1 [Ajellomyces capsulatus
H88]
Length = 552
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 195/408 (47%), Gaps = 83/408 (20%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV + GGMH V LT D K+ T
Sbjct: 128 VYVCGEGSSGELGLGAAKNVVDVKRPRLNPHLPADKVGVVHIATGGMHCVALTHDNKILT 187
Query: 93 WGCNDEGALGREAEGD-----------------------------------SEFIPQTVN 117
WG ND+GALGR+ D SE+ P+
Sbjct: 188 WGVNDQGALGRDTTWDGGYKDIKEGDGDDSDSDSDSDSGLNPRESTPAAVPSEYFPEDTV 247
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVK 176
VQ++A DS S AL + G+VY WG+FR + G +G GE +Q+TP+ L ++ I
Sbjct: 248 F----VQVAASDSASFALTDVGSVYGWGTFRSNDGILGFDGESTVQRTPVLLPTLKKIKS 303
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHI 235
I GA+H + L +G++ G +Q QLGR I +R+ ++ L+P E L K++
Sbjct: 304 ITCGANHVLALNDKGSVFAWGSGQQNQLGRRIIERTK-------INGLQPREFGLP-KNM 355
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQ----LGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ G Y++F I G + A+GLN++ + +G SE P +++SL D
Sbjct: 356 VGLGCGSYHSFAIHKSGKVYAWGLNSFGETGIRMGAGGSEA------AILHPLVVESLKD 409
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPT 336
K + G HHSLAL ++G+ AFGR D + GLK N + PT
Sbjct: 410 KDIIQICGGAHHSLALTAKGECLAFGRLDGFQTGLKIDSLPESSIIRDDRNAPRILITPT 469
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
IP + I+S G+ S AID +G + WG YQ G G ++DI
Sbjct: 470 AIPGIDACHISS---GSEHSIAIDKDGRAWSWGFSANYQTGQGTDEDI 514
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 168/404 (41%), Gaps = 111/404 (27%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT---------------------QRS 211
G+V IA+G H V LT +LT G +QG LGR T
Sbjct: 165 GVVHIATGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGYKDIKEGDGDDSDSDSDSD 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYSQL 264
+ N R P VP + D VF V + ++ GS+ +G +N L
Sbjct: 225 SGLNPREST----PAAVPSEYFPEDTVFVQVAASDSASFALTDVGSVYGWGTFRSNDGIL 280
Query: 265 G-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G + +S VQ+ TP L+ +L KK + G +H LALN +G ++A+G +L
Sbjct: 281 GFDGESTVQR-------TPVLLPTL--KKIKSITCGANHVLALNDKGSVFAWGSGQQNQL 331
Query: 324 GLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----G 373
G + + E T I LQ K + + CG+ SFAI G +Y WG+ + G
Sbjct: 332 GRR-----IIERTKINGLQPREFGLPKNMVGLGCGSYHSFAIHKSGKVYAWGLNSFGETG 386
Query: 374 YQLGNG---------------KEDDI------------LNSEGKIYAFGRHDYGRLGLK- 405
++G G K+ DI L ++G+ AFGR D + GLK
Sbjct: 387 IRMGAGGSEAAILHPLVVESLKDKDIIQICGGAHHSLALTAKGECLAFGRLDGFQTGLKI 446
Query: 406 -------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
N + PT IP + I+S G+ S AID +G + WG
Sbjct: 447 DSLPESSIIRDDRNAPRILITPTAIPGIDACHISS---GSEHSIAIDKDGRAWSWGFSAN 503
Query: 453 YQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++D I+E + GK+LN +GGQ+SV
Sbjct: 504 YQTGQGTDEDIEVASIVENTAVRGKRLN-----WAGAGGQYSVF 542
>gi|310795953|gb|EFQ31414.1| hypothetical protein GLRG_06558 [Glomerella graminicola M1.001]
Length = 446
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 181/377 (48%), Gaps = 49/377 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVE-----DLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G G+ +LGLGP V E L + D VV+V GGMH LT DGKV TW
Sbjct: 45 VAVWGSGENCELGLGPRVTEAPKPRLADRFLSADTVGVVQVSAGGMHCAALTRDGKVLTW 104
Query: 94 GCNDEGALGREAEGDS------------EFIPQTVNLPK--KAVQISAGDSHSVALLEDG 139
G ND+GALGR D+ E P V L + VQ++A +S AL +G
Sbjct: 105 GVNDDGALGRVRLPDTPEEGAEDLLDPFESTPGQVPLDDDVEVVQVAATNSACFALTAEG 164
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKT----PLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
TVY WGSF G+ G E KT P+++ + ++++A GA+H + LT+ GN+
Sbjct: 165 TVYGWGSFAGGDGNFGFLHEKPPKTTEQLPVRIPGLENVMEMAGGANHILALTNDGNVFA 224
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSIL 254
G EQ +LGR RR L P V L + +F G Y++F I G +
Sbjct: 225 WGSGEQNELGRRVLE------RRRFETLIPQRVGLPKNKTAQIFAGSYHSFAIDVDGKVW 278
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
AFGLNN+ Q G E+ +G T +P ++KSLSD + +A G HHS+A G++
Sbjct: 279 AFGLNNFGQCGIPTREI--TGFTTIISPTIVKSLSDYEIRHIACGLHHSIACTKSGQVLV 336
Query: 315 FGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
+GR D G++ + + + PT +P + D+ +A G F +
Sbjct: 337 WGRCDDGQMSISLDAVAKEHIIFDSRGRPRVLNVPTEVP-IPDRQAVFVAAGIDNCFVVA 395
Query: 361 SEGVLYGWGMGNGYQLG 377
+E LY WG Y G
Sbjct: 396 NE--LYAWGFSASYNTG 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 138/337 (40%), Gaps = 58/337 (17%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTA 196
V WGS + +G + K L +S G+V++++G H LT G +LT
Sbjct: 45 VAVWGSGENCELGLGPRVTEAPKPRLADRFLSADTVGVVQVSAGGMHCAALTRDGKVLTW 104
Query: 197 GCPEQGQLGRIT-QRSASRNARRGMSFLE--PGEVPLKRKHIDDVFTGVYNTF---ISSK 250
G + G LGR+ + A + E PG+VPL ++ V N+ ++++
Sbjct: 105 GVNDDGALGRVRLPDTPEEGAEDLLDPFESTPGQVPLD-DDVEVVQVAATNSACFALTAE 163
Query: 251 GSILAFGL-----NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
G++ +G N+ L E K T P I L + +A G +H LA
Sbjct: 164 GTVYGWGSFAGGDGNFGFLHE------KPPKTTEQLPVRIPGLEN--VMEMAGGANHILA 215
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS---LQDKTITSIACGNCVSFAIDSE 362
L ++G ++A+G + LG + V E T IP L I G+ SFAID +
Sbjct: 216 LTNDGNVFAWGSGEQNELG-RRVLERRRFETLIPQRVGLPKNKTAQIFAGSYHSFAIDVD 274
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIP 418
G K++AFG +++G+ G+ + PT +
Sbjct: 275 G--------------------------KVWAFGLNNFGQCGIPTREITGFTTIISPTIVK 308
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
SL D I IACG S A G + WG + Q+
Sbjct: 309 SLSDYEIRHIACGLHHSIACTKSGQVLVWGRCDDGQM 345
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE------------PTPIPSLQD 343
+++G H AL +GK+ +G +D G LG + + E P +P D
Sbjct: 85 VSAGGMHCAALTRDGKVLTWGVNDDGALGRVRLPDTPEEGAEDLLDPFESTPGQVPLDDD 144
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG 403
+ +A N FA+ +EG +YGWG +A G ++G L
Sbjct: 145 VEVVQVAATNSACFALTAEGTVYGWGS---------------------FAGGDGNFGFLH 183
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN----GK 459
K P IP L++ + +A G A+ ++G ++ WG G +LG +
Sbjct: 184 EKPPKTTEQLPVRIPGLEN--VMEMAGGANHILALTNDGNVFAWGSGEQNELGRRVLERR 241
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ L P ++ L Q+ +G HS +
Sbjct: 242 RFETLIPQRV---GLPKNKTAQIFAGSYHSFAI 271
>gi|340939343|gb|EGS19965.1| putative regulator of chromosome condensation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 623
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 198/401 (49%), Gaps = 67/401 (16%)
Query: 39 VLTCGQGDTGQLGLG------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G+G G+LGLG ++ K + +L NVV++ GGMH LT+D K+ T
Sbjct: 196 VFVFGEGTAGELGLGSVRYDGKKPIDVKRPRINHNLKNVVQIACGGMHVAALTKDNKILT 255
Query: 93 WGCNDEGALGREAEGD-----------------------SEFIP---QTVNLPK--KAVQ 124
WG ND+GALGR+ D E P T ++P+ + VQ
Sbjct: 256 WGVNDQGALGRDTTWDGGLRDINEEDSDDDDNDDTGMNPKESTPGEIDTTDIPEGTRWVQ 315
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADH 183
+ A DS + AL + G VY WG+FR + G +G K +Q+TP + +S I K+A+G +H
Sbjct: 316 VVASDSATFALTDTGLVYGWGTFRSNEGILGFSKNVLVQRTPTLVPGLSKIKKLAAGLNH 375
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP---GEVPLKRKHIDDVFT 240
+ + + + G +Q QL R R R+ G + L+P G +P R D +
Sbjct: 376 ILAMDEKNKIYAWGAGQQAQLAR---RLLERD--EGSTGLQPTGIGSLP-HRAKPDMIAC 429
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G Y++F I +K + +GLNNY++LG D Q+ + P LI++L+ K +A G
Sbjct: 430 GSYHSFVIDTKKRVYGWGLNNYAELGIEDGVGQEG--SYLMRPQLIEALAGYKIVDIAGG 487
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE----------------PTPIPSLQD 343
+HHSLA +GK+ +GR D ++G SE +E PT +P+++
Sbjct: 488 EHHSLACTEDGKLLTWGRIDGHQVG--QPSESFSEDNTVWDERQKPRILIFPTVVPNIEG 545
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ +A G SFA+ +G +Y WG YQ G G DDI
Sbjct: 546 --VVKVAAGTDHSFAVTKDGKVYSWGFSANYQTGQGTTDDI 584
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 172/407 (42%), Gaps = 87/407 (21%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------QR 210
K P ++ +V+IA G H LT +LT G +QG LGR T
Sbjct: 223 KRPRINHNLKNVVQIACGGMHVAALTKDNKILTWGVNDQGALGRDTTWDGGLRDINEEDS 282
Query: 211 SASRNARRGMSFLE--PGEV-----PLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNY 261
N GM+ E PGE+ P + + V + ++ G + +G +N
Sbjct: 283 DDDDNDDTGMNPKESTPGEIDTTDIPEGTRWVQVVASDSATFALTDTGLVYGWGTFRSNE 342
Query: 262 SQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
LG + VQ+ TP L+ LS K LA+G +H LA++ + KIYA+G
Sbjct: 343 GILGFSKNVLVQR-------TPTLVPGLS--KIKKLAAGLNHILAMDEKNKIYAWGAGQQ 393
Query: 321 GRLG--LKNVSEPVT--EPTPIPSLQDKTITS-IACGNCVSFAIDSEGVLYGWGMGN--- 372
+L L E T +PT I SL + IACG+ SF ID++ +YGWG+ N
Sbjct: 394 AQLARRLLERDEGSTGLQPTGIGSLPHRAKPDMIACGSYHSFVIDTKKRVYGWGLNNYAE 453
Query: 373 -GYQLGNGKEDDIL---------------------------NSEGKIYAFGRHDYGRLGL 404
G + G G+E L +GK+ +GR D ++G
Sbjct: 454 LGIEDGVGQEGSYLMRPQLIEALAGYKIVDIAGGEHHSLACTEDGKLLTWGRIDGHQVG- 512
Query: 405 KNVSEPVTE----------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
SE +E PT +P+++ + +A G SFA+ +G +Y WG
Sbjct: 513 -QPSESFSEDNTVWDERQKPRILIFPTVVPNIEG--VVKVAAGTDHSFAVTKDGKVYSWG 569
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
YQ G G DDI P I+ + + ++ +GGQ+ ++ A P
Sbjct: 570 FSANYQTGQGTTDDIEAPTLIDNSAIRDRKIIFAGAGGQYGILGALP 616
>gi|358385781|gb|EHK23377.1| hypothetical protein TRIVIDRAFT_212510 [Trichoderma virens Gv29-8]
Length = 585
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 193/409 (47%), Gaps = 78/409 (19%)
Query: 39 VLTCGQGDTGQLGLGPDV------MERKTFALVEDLD----NVVEVVVGGMHTVCLTEDG 88
+ G+G +G+LGLG ++ K L ++L VV++ GGMH V LT D
Sbjct: 146 IYVFGEGTSGELGLGSKRVNGKKPIDVKRPRLNDNLSAKTVGVVQIACGGMHVVALTRDN 205
Query: 89 KVYTWGCNDEGALGREAEGD----------------------------------SEFIPQ 114
K+ TWG ND+GALGR+ D EF P
Sbjct: 206 KILTWGVNDQGALGRDTNWDGGLRDADKADDSDSEDEDDTGINPKESTPTALSEEEFAPG 265
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSG 173
T K VQ+ A DS S L EDG VY WG+FR S G +G + +Q P + +
Sbjct: 266 T-----KFVQVVASDSASFVLTEDGRVYGWGTFRSSDGILGFTESVRVQTRPALVAGLKN 320
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +A+GA+H + L ++GN++ GC +Q QLGR R RN MS L P V L R
Sbjct: 321 IKALAAGANHILALDNKGNVVAWGCGQQNQLGR---RIIERNK---MSSLIPQGVGLPRG 374
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G Y++F I + G++ +GLNN+ ++G ++ + + P I L+D
Sbjct: 375 KIAKIACGSYHSFAIDNNGAVWGWGLNNFGEIGVENNAGED--DAVILKPVKISFLADHT 432
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-----------------KNVSEPVTEP 335
T + G HHSLA +G+++A+GR D ++G + + + +P
Sbjct: 433 VTGIEGGIHHSLACTEKGELFAWGRVDGYQVGFELEAIEKVDKEYVIRDERGTARILVKP 492
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
T + D I S+A G SFA+ +G Y WG + YQ G G DDI
Sbjct: 493 TKHEGVSD--IVSVAAGTDNSFAVSKDGKAYSWGFSSNYQTGQGTIDDI 539
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 176/410 (42%), Gaps = 70/410 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSF------RDSHGSMGLKGE--------------GI- 161
VQI+ G H VAL D + WG RD++ GL+ GI
Sbjct: 189 VQIACGGMHVVALTRDNKILTWGVNDQGALGRDTNWDGGLRDADKADDSDSEDEDDTGIN 248
Query: 162 --QKTPLKL---ESVSG---IVKIASGADHFVMLTSRGNLLTAGC--PEQGQLG-----R 206
+ TP L E G + +AS + FV LT G + G G LG R
Sbjct: 249 PKESTPTALSEEEFAPGTKFVQVVASDSASFV-LTEDGRVYGWGTFRSSDGILGFTESVR 307
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ R A + + L G HI + +KG+++A+G +QLG
Sbjct: 308 VQTRPALVAGLKNIKALAAGA-----NHI---------LALDNKGNVVAWGCGQQNQLGR 353
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
E K + P + L K +A G +HS A+++ G ++ +G +++G +G++
Sbjct: 354 RIIERNKMSS---LIPQGV-GLPRGKIAKIACGSYHSFAIDNNGAVWGWGLNNFGEIGVE 409
Query: 327 NVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
N + + +P I L D T+T I G S A +G L+ WG +GYQ+G E
Sbjct: 410 NNAGEDDAVILKPVKISFLADHTVTGIEGGIHHSLACTEKGELFAWGRVDGYQVGF--EL 467
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ + K Y R + G + + +PT + D I S+A G SFA+ +G
Sbjct: 468 EAIEKVDKEYVI-RDERG------TARILVKPTKHEGVSD--IVSVAAGTDNSFAVSKDG 518
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
Y WG + YQ G G DDI P I+ + ++ +GGQ+SV++
Sbjct: 519 KAYSWGFSSNYQTGQGTIDDIHVPTFIDNTATRDKKIIAAGAGGQYSVLI 568
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 105/290 (36%), Gaps = 64/290 (22%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
K I+D T V + ++ +G+ GL + G+ +V++ P L +LS K
Sbjct: 134 KKINDAPTQVLDIYVFGEGTSGELGLGSKRVNGKKPIDVKR--------PRLNDNLSAKT 185
Query: 293 F--TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN----------------------- 327
+A G H +AL + KI +G +D G LG
Sbjct: 186 VGVVQIACGGMHVVALTRDNKILTWGVNDQGALGRDTNWDGGLRDADKADDSDSEDEDDT 245
Query: 328 -VSEPVTEPTPIPSLQ---DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
++ + PT + + + + SF + +G +YGWG
Sbjct: 246 GINPKESTPTALSEEEFAPGTKFVQVVASDSASFVLTEDGRVYGWGTF------------ 293
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
R G LG T P + L K I ++A G A+D++G
Sbjct: 294 ------------RSSDGILGFTESVRVQTRPALVAGL--KNIKALAAGANHILALDNKGN 339
Query: 444 LYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ WG G QLG E + + + +G L + ++A G HS +
Sbjct: 340 VVAWGCGQQNQLGRRIIERNKMSSLIPQGVGLPRGKIAKIACGSYHSFAI 389
>gi|255089408|ref|XP_002506626.1| predicted protein [Micromonas sp. RCC299]
gi|226521898|gb|ACO67884.1| predicted protein [Micromonas sp. RCC299]
Length = 405
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 177/353 (50%), Gaps = 47/353 (13%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE---FIPQTVNLPKK-----AVQI 125
VV GG+H+V ++ +G +YTWG +DEG LGR D + +P V LP + +
Sbjct: 53 VVAGGLHSVAVSVEGDIYTWGTHDEGQLGRNVPKDDDEAPAVPGKVTLPAECKGAEVINA 112
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK--------GEGIQKTPLKLESVSGIVKI 177
A DS + AL +DG+V+ G F+D G +G G P + I +
Sbjct: 113 EATDSATFALFDDGSVFGCGVFKDD-GELGFSPDNPGRQHGMAPVAGPRAPSHTAPIESM 171
Query: 178 ASGADHFVMLTSR----------GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
A+G H V+LTSR +LT G QGQLGR+ R R R + L P
Sbjct: 172 AAGNGHVVLLTSRFGRDGKAASKPKVLTLGAGAQGQLGRVGTRIGPRAHSR--TLLAPAA 229
Query: 228 VPLKRK--HIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
V + R VF G ++TF+ + ++AFGLNN+ QLG + + F P +
Sbjct: 230 VRMPRGAGQPVAVFAGGFHTFVLTDLDKVVAFGLNNFGQLG-----LPPDDSMAVFIPKI 284
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV----TEPTP--- 337
+ SLS K T LA G+HH++AL G + FGR+ YGRLG + E V +PTP
Sbjct: 285 VPSLSGKGITELACGEHHTVALTRSGHVLTFGRYAYGRLGRRTEEEMVDGDAADPTPTRV 344
Query: 338 -IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILNSE 388
P+ ++ S+A G+ S AID GVLY WG G G+ LG G EDD+ E
Sbjct: 345 AFPA-GAASVCSVAAGSTTSGAIDERGVLYMWGCGEGHMLGRGDDEDDVFAPE 396
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 39 VLTCGQGDTGQLG-----LGPDVMERKTFA-----LVEDLDNVVEVVVGGMHTVCLTEDG 88
VLT G G GQLG +GP R A + V V GG HT LT+
Sbjct: 197 VLTLGAGAQGQLGRVGTRIGPRAHSRTLLAPAAVRMPRGAGQPVAVFAGGFHTFVLTDLD 256
Query: 89 KVYTWGCNDEGALGREAEGD-SEFIPQTV-NLPKKAV-QISAGDSHSVALLEDGTVYAWG 145
KV +G N+ G LG + + FIP+ V +L K + +++ G+ H+VAL G V +G
Sbjct: 257 KVVAFGLNNFGQLGLPPDDSMAVFIPKIVPSLSGKGITELACGEHHTVALTRSGHVLTFG 316
Query: 146 SFRDSHGSMGLK-------GEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLT 195
+ ++G +G + G+ TP ++ +G + +A+G+ + RG L
Sbjct: 317 RY--AYGRLGRRTEEEMVDGDAADPTPTRVAFPAGAASVCSVAAGSTTSGAIDERGVLYM 374
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
GC E LGR P EVP+K
Sbjct: 375 WGCGEGHMLGRGDDED---------DVFAPEEVPVK 401
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP-------SLQDK 344
K ++ +G HS+A++ EG IY +G HD G+LG +NV + E +P +
Sbjct: 49 KCQIVVAGGLHSVAVSVEGDIYTWGTHDEGQLG-RNVPKDDDEAPAVPGKVTLPAECKGA 107
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGM 370
+ + + +FA+ +G ++G G+
Sbjct: 108 EVINAEATDSATFALFDDGSVFGCGV 133
>gi|225555094|gb|EEH03387.1| GDP/GTP exchange factor [Ajellomyces capsulatus G186AR]
Length = 552
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 192/408 (47%), Gaps = 83/408 (20%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV + GGMH V LT D K+ T
Sbjct: 128 VYVCGEGSSGELGLGAAKNAVDVKRPRLNPHLPADKVGVVHIATGGMHCVALTHDNKILT 187
Query: 93 WGCNDEGALGREAEGD-----------------------------------SEFIPQTVN 117
WG ND+GALGR D SE+ P+
Sbjct: 188 WGVNDQGALGRNTTWDGGYKDIKEGDGDDSDSDSDSDSGLNPRESTPAAVPSEYFPEDTV 247
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVK 176
VQ++A DS S L + G+VY WG+FR + G +G GE +Q+TP+ L ++ I
Sbjct: 248 F----VQVAASDSASFVLTDVGSVYGWGTFRSNDGILGFDGESTVQRTPVLLPTLKKIKS 303
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHI 235
I GA+H + L +G++ G +Q QLG RI +R+ ++ L+P E L K++
Sbjct: 304 ITCGANHVLALNDKGSVFAWGSGQQNQLGRRIIERTK-------INGLQPREFGLP-KNM 355
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQ----LGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ G Y++F I G + A+GLN++ + +G D E P +++SL D
Sbjct: 356 VGLGCGSYHSFAIHKSGKVYAWGLNSFGETGIRMGAGDREA------AILHPLVVESLKD 409
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPT 336
K + G+HHSLAL ++G+ AFGR D + GLK N + PT
Sbjct: 410 KDIIQICGGEHHSLALTAKGECLAFGRLDGFQTGLKIDSLPESSIIRDDRNAPRILITPT 469
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
IP + I G+ S AID +G + WG YQ G G ++DI
Sbjct: 470 AIPGID---ACHIGSGSEHSIAIDKDGRAWSWGFSANYQTGQGTDEDI 514
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 166/404 (41%), Gaps = 111/404 (27%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT---------------------QRS 211
G+V IA+G H V LT +LT G +QG LGR T
Sbjct: 165 GVVHIATGGMHCVALTHDNKILTWGVNDQGALGRNTTWDGGYKDIKEGDGDDSDSDSDSD 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYSQL 264
+ N R P VP + D VF V + ++ GS+ +G +N L
Sbjct: 225 SGLNPREST----PAAVPSEYFPEDTVFVQVAASDSASFVLTDVGSVYGWGTFRSNDGIL 280
Query: 265 G-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G + +S VQ+ TP L+ +L KK + G +H LALN +G ++A+G +L
Sbjct: 281 GFDGESTVQR-------TPVLLPTL--KKIKSITCGANHVLALNDKGSVFAWGSGQQNQL 331
Query: 324 GLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----G 373
G + + E T I LQ K + + CG+ SFAI G +Y WG+ + G
Sbjct: 332 GRR-----IIERTKINGLQPREFGLPKNMVGLGCGSYHSFAIHKSGKVYAWGLNSFGETG 386
Query: 374 YQLGNG---------------KEDDI------------LNSEGKIYAFGRHDYGRLGLK- 405
++G G K+ DI L ++G+ AFGR D + GLK
Sbjct: 387 IRMGAGDREAAILHPLVVESLKDKDIIQICGGEHHSLALTAKGECLAFGRLDGFQTGLKI 446
Query: 406 -------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
N + PT IP + I G+ S AID +G + WG
Sbjct: 447 DSLPESSIIRDDRNAPRILITPTAIPGID---ACHIGSGSEHSIAIDKDGRAWSWGFSAN 503
Query: 453 YQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++D I+E + GK+LN +GGQ+SV
Sbjct: 504 YQTGQGTDEDIEVASIVENTAVRGKRLN-----WADAGGQYSVF 542
>gi|322699843|gb|EFY91602.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium acridum CQMa
102]
Length = 539
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 196/408 (48%), Gaps = 77/408 (18%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-----------NVVEVVVGGMHTVCLTE 86
V G G+ G+LGLGP ++T ALV + ++V++ GGMHT+ LT
Sbjct: 108 AVFAFGSGECGELGLGP----KRTAALVPKFNPALDPNDASKYHIVQLACGGMHTIALTA 163
Query: 87 DGKVYTWGCNDEGALGR-----------EAEGDS----------EFIPQTV---NLPKKA 122
D K+ TWG NDEGALGR +AE DS E P V N PK
Sbjct: 164 DNKILTWGVNDEGALGRDTAWEGGLKDMDAESDSGDEDGELNPYECTPTEVPAKNFPKGT 223
Query: 123 V--QISAGDSHSVALLEDGTVYAWGSFRDSHG------SMGLKGEGIQKTPLKLESVSGI 174
V Q++AGDS S L + GTVY WGSFRD+ G S K IQK P+ + + +
Sbjct: 224 VFTQVAAGDSCSFVLTQTGTVYGWGSFRDNKGDRRFTKSQNGKVVEIQKDPILIPELENV 283
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
++IA GA+H + L G + G EQ QLGR R L P +V + +
Sbjct: 284 IQIACGANHALALDKSGQVWGWGSYEQNQLGR------QPFGRYQQETLLPRQVRVCTRP 337
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKK 292
I + +G Y++F + K ++ A+GLN++ GEA + G+ P I+ L K
Sbjct: 338 IKYIASGEYHSFAVDRKDNVWAWGLNSF---GEAGYAKEAGGDEAILPYPMKIRDLCGKG 394
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----------------NVSEPVTEP 335
+A G HHS A+ +GK+Y +GR D G+LG+ N P
Sbjct: 395 VVSMAGGTHHSGAVTEDGKVYMWGRLDGGQLGIDFSQSQLDDEHLVRRDEYNKPRICLRP 454
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
T +P + + + +ACG + I+ EGV Y G G+ QLG G EDD
Sbjct: 455 TVVPEIGN--VVDVACGTDHTIFINDEGVGYATGFGSVGQLGLGNEDD 500
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 162/392 (41%), Gaps = 80/392 (20%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------QRSASRNARRGMS 221
IV++A G H + LT+ +LT G ++G LGR T S +
Sbjct: 148 IVQLACGGMHTIALTADNKILTWGVNDEGALGRDTAWEGGLKDMDAESDSGDEDGELNPY 207
Query: 222 FLEPGEVPLKRKHIDDVFTGVY-----NTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P EVP K VFT V + ++ G++ +G ++ D KS N
Sbjct: 208 ECTPTEVPAKNFPKGTVFTQVAAGDSCSFVLTQTGTVYGWGSFRDNK---GDRRFTKSQN 264
Query: 277 TCFFT----PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P LI L + +A G +H+LAL+ G+++ +G ++ +LG +
Sbjct: 265 GKVVEIQKDPILIPELEN--VIQIACGANHALALDKSGQVWGWGSYEQNQLGRQPFGRYQ 322
Query: 333 TEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL 385
E T +P + + I IA G SFA+D + ++ WG+ + GY G ++ IL
Sbjct: 323 QE-TLLPRQVRVCTRPIKYIASGEYHSFAVDRKDNVWAWGLNSFGEAGYAKEAGGDEAIL 381
Query: 386 ---------------------------NSEGKIYAFGRHDYGRLGLK------------- 405
+GK+Y +GR D G+LG+
Sbjct: 382 PYPMKIRDLCGKGVVSMAGGTHHSGAVTEDGKVYMWGRLDGGQLGIDFSQSQLDDEHLVR 441
Query: 406 ----NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
N PT +P + + + +ACG + I+ EGV Y G G+ QLG G ED
Sbjct: 442 RDEYNKPRICLRPTVVPEIGN--VVDVACGTDHTIFINDEGVGYATGFGSVGQLGLGNED 499
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
D +I GK + ++ A+GGQ SV+ +
Sbjct: 500 DANTAQRIRGKDIKGRKLVGAAAGGQFSVVTS 531
>gi|326481150|gb|EGE05160.1| ran exchange factor Prp20/Pim1 [Trichophyton equinum CBS 127.97]
Length = 540
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 196/427 (45%), Gaps = 79/427 (18%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + PT K + V CG+G G+LGLG DV + AL+
Sbjct: 104 RKPKPKVAINK--APTQKLR-----VFVCGEGSQGELGLGAAKGTVDVKRPRLNALLAPE 156
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD------------------- 108
D VV+V GGMH V LT DG+V TWG ND+GALGR+ +
Sbjct: 157 DVGVVQVAAGGMHCVALTHDGRVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDTSSDSGS 216
Query: 109 ----SEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
+ + +P A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 217 DSGLNPYESTPTAIPSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRGNEGIIGFD 276
Query: 158 GE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
E IQ TP + + I +A G +H + + +RG + G +Q QLGR R RN
Sbjct: 277 AETKIQPTPKLISGLKKITHVACGDNHALAIDNRGAVFAWGSGQQNQLGR---RIVERNK 333
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS----QLGEADSEV 271
G L+P E L K+I V G +++F + G + +GLN+Y Q G D E
Sbjct: 334 LNG---LQPREFGLP-KNITHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEA 389
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----- 326
P ++ SL DK + G H +LA ++G +GR D + GLK
Sbjct: 390 ------VILHPTVVDSLKDKNVVQICGGSHPTLARTTDGDCLVWGRLDGFQSGLKVDTLS 443
Query: 327 ---------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
N + + EPT +P + + +A G S AID+EG + WG YQ G
Sbjct: 444 DSAVIKDDRNRARVLFEPTAVPGFKAE---YVAAGADHSIAIDNEGRAWTWGFSANYQTG 500
Query: 378 NGKEDDI 384
G +DDI
Sbjct: 501 QGTDDDI 507
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 187/432 (43%), Gaps = 111/432 (25%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E V G+V++A+G H V LT G +LT G +Q
Sbjct: 129 SQGELGLGAAKGTVDVKRPRLNALLAPEDV-GVVQVAAGGMHCVALTHDGRVLTWGVNDQ 187
Query: 202 GQLGRIT-----------QRSASRNARRGMSFLEPGE-----VPLKR----KHIDDVFTG 241
G LGR T +S + + S L P E +P I V G
Sbjct: 188 GALGRDTTWEGGLKDIDDAKSDTSSDSGSDSGLNPYESTPTAIPSDAFPEGTVIVQVAAG 247
Query: 242 VYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++F ++ G + +G N +G +A++++Q TP LI L KK T +A
Sbjct: 248 DSSSFALTDDGLVYGWGTFRGNEGIIGFDAETKIQP-------TPKLISGL--KKITHVA 298
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------KTITSIAC 351
G +H+LA+++ G ++A+G +LG + + E + LQ K IT + C
Sbjct: 299 CGDNHALAIDNRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGLPKNITHVGC 353
Query: 352 GNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL---------------------- 385
G+ SFA+ G +YGWG+ + G Q G G ++ ++
Sbjct: 354 GSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVILHPTVVDSLKDKNVVQICGGSH 413
Query: 386 -----NSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPTPIPSLQDKTIT 426
++G +GR D + GLK N + + EPT +P + +
Sbjct: 414 PTLARTTDGDCLVWGRLDGFQSGLKVDTLSDSAVIKDDRNRARVLFEPTAVPGFKAE--- 470
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQ 481
+A G S AID+EG + WG YQ G G +DD I++ + GK+LN
Sbjct: 471 YVAAGADHSIAIDNEGRAWTWGFSANYQTGQGTDDDIEVATIVDNTAVRGKKLNT----- 525
Query: 482 VASGGQHSVILA 493
+GGQ+S+ A
Sbjct: 526 AGAGGQYSIFTA 537
>gi|380473989|emb|CCF46021.1| ran exchange factor Prp20/Pim1 [Colletotrichum higginsianum]
Length = 685
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 194/408 (47%), Gaps = 81/408 (19%)
Query: 39 VLTCGQGDTGQLGLGP---------DVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG DV + L+ D VV++ GGMH LT+D
Sbjct: 240 VYVFGEGSSGELGLGSKKLDGKKVVDVKRPRLNPLLSAKDVGVVQIACGGMHVAALTKDN 299
Query: 89 KVYTWGCNDEGALGRE--------------------------------AEGDSEFIPQTV 116
K+ TWG ND+GALGR+ A G F P+
Sbjct: 300 KILTWGVNDQGALGRDTNWDGGLRDADAEEEEEDEDDSGINPRESTPTALGAEHFAPEA- 358
Query: 117 NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIV 175
K Q+ A DS + AL EDG VY WG+FR S G +G + IQKTP L ++ I
Sbjct: 359 ----KFTQVVASDSATFALTEDGRVYGWGTFRSSDGILGFTDKIQIQKTPEYLPTLKNIT 414
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+A+G++H + L +G ++ GC +Q QLGR R RN +S L P + + + +
Sbjct: 415 ALAAGSNHILALDDKGVVVAWGCGQQNQLGR---RIIERNK---LSSLIPQSLGIPKGKV 468
Query: 236 DDVFTGVYNTFISSK-GSILAFGLNNYSQL------GEADSEVQKSGNTCFFTPHLIKSL 288
D + G Y++F +K G + A+GLNN+++ GE D+ V P ++++L
Sbjct: 469 DRIACGSYHSFALAKDGRVWAWGLNNFAETGIEMGAGEDDAVV--------LRPTIVEAL 520
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP----VTEPTPIPSLQDK 344
D K +A G+HHSLA +GK+ +GR D ++G+ P + + + P + K
Sbjct: 521 KDYKVKQIAGGEHHSLACTEDGKLLTWGRLDGNQVGIPVEELPADSVIKDESNNPRILSK 580
Query: 345 TITSIACGNCV--------SFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
CV +FAID++G + WG YQ G G +DI
Sbjct: 581 PTVVEDIAKCVYVAAGVDNNFAIDNKGEAHSWGFSANYQTGQGTTEDI 628
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 165/396 (41%), Gaps = 81/396 (20%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-----------RSAS 213
PL G+V+IA G H LT +LT G +QG LGR T
Sbjct: 273 PLLSAKDVGVVQIACGGMHVAALTKDNKILTWGVNDQGALGRDTNWDGGLRDADAEEEEE 332
Query: 214 RNARRGMSFLEPGEVPLKRKHI--DDVFTGVYN----TF-ISSKGSILAFGLNNYSQ--L 264
G++ E L +H + FT V TF ++ G + +G S L
Sbjct: 333 DEDDSGINPRESTPTALGAEHFAPEAKFTQVVASDSATFALTEDGRVYGWGTFRSSDGIL 392
Query: 265 GEADS-EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G D ++QK TP + +L K T LA+G +H LAL+ +G + A+G +L
Sbjct: 393 GFTDKIQIQK-------TPEYLPTL--KNITALAAGSNHILALDDKGVVVAWGCGQQNQL 443
Query: 324 GLK-----NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GY 374
G + +S + + IP + + IACG+ SFA+ +G ++ WG+ N G
Sbjct: 444 GRRIIERNKLSSLIPQSLGIPKGK---VDRIACGSYHSFALAKDGRVWAWGLNNFAETGI 500
Query: 375 QLGNGKEDDIL---------------------------NSEGKIYAFGRHDYGRLGLKNV 407
++G G++D ++ +GK+ +GR D ++G+
Sbjct: 501 EMGAGEDDAVVLRPTIVEALKDYKVKQIAGGEHHSLACTEDGKLLTWGRLDGNQVGIPVE 560
Query: 408 SEP----VTEPTPIPSLQDKTITSIACGNCV--------SFAIDSEGVLYGWGMGNGYQL 455
P + + + P + K CV +FAID++G + WG YQ
Sbjct: 561 ELPADSVIKDESNNPRILSKPTVVEDIAKCVYVAAGVDNNFAIDNKGEAHSWGFSANYQT 620
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
G G +DI P I+ + ++ +GGQ+S++
Sbjct: 621 GQGTTEDIETPTTIDNTAVRGKKLVFAGAGGQYSIL 656
>gi|367039539|ref|XP_003650150.1| hypothetical protein THITE_2038461 [Thielavia terrestris NRRL 8126]
gi|346997411|gb|AEO63814.1| hypothetical protein THITE_2038461 [Thielavia terrestris NRRL 8126]
Length = 496
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 195/401 (48%), Gaps = 66/401 (16%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-------NVVEVVVGGMHTVCLTEDGKV 90
VL G GD G+LGLGP V E L L+ VV++ GGMHTV LTED ++
Sbjct: 68 AVLVFGNGDAGELGLGPAVQEAARPRLNPYLNPDDPSALRVVQIACGGMHTVALTEDNRI 127
Query: 91 YTWGCNDEGALGRE---------AEGDSE-------------FIPQTVNLPK-KAVQISA 127
TWG ND GALGRE +GD E IP + P + Q++A
Sbjct: 128 VTWGVNDNGALGRETAWVGALRDVDGDPEEDGELNPLEATPSPIPSSAFPPGLRFTQVAA 187
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGS----MGLKGEGI--QKTPLKLESVSGIVKIASGA 181
GDS S AL G VY WG+F+D G+ ++G+ + Q TP + +S I +IA GA
Sbjct: 188 GDSCSFALTATGDVYGWGTFKDPQGNERFGYDVRGQVVDRQSTPAPVPGLSRITQIACGA 247
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L G + + GC EQ QLGR R + R+A L PG P++ + + V G
Sbjct: 248 NHALALDVDGVVWSWGCNEQAQLGR---RLSGRHA---TDSLTPG--PVQIRDVKYVACG 299
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y++ I K + A+GLN++ + G A +G+ P + +L K LA G
Sbjct: 300 DYHSLAIDKKDQVWAWGLNSFGEAGYAKGA--GTGDVVLPFPMKVPALRGKSVVCLAGGS 357
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-----------------EPTPIPSLQD 343
HHS A+ ++G+ +GR D G+LG+ + + +PTP+P +
Sbjct: 358 HHSAAVTADGQCLVWGRLDGGQLGIAFSPDTLRDAKRIRSDERGKPRICLQPTPVPGI-- 415
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ +ACG+ + I EG Y G QLG G EDD+
Sbjct: 416 GRVYHVACGSDHTIFITREGTAYATGFNAQGQLGLGHEDDV 456
>gi|85097594|ref|XP_960475.1| hypothetical protein NCU05513 [Neurospora crassa OR74A]
gi|28921967|gb|EAA31239.1| hypothetical protein NCU05513 [Neurospora crassa OR74A]
Length = 618
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 193/395 (48%), Gaps = 56/395 (14%)
Query: 39 VLTCGQGDTGQLGLGP------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G +G+LGLG ++ K + +L +V+V GGMH LT+D K+ T
Sbjct: 197 IFVFGEGTSGELGLGSLKYDGKKPIDVKRPRINHNLSGIVQVACGGMHVAALTKDNKILT 256
Query: 93 WGCNDEGALGR-----------EAEGDSEFIPQTVNLPKKA----------------VQI 125
WG ND+GALGR +AE DSE T PK++ VQ+
Sbjct: 257 WGVNDQGALGRDTTWDGGLRDADAESDSEDEDDTGLNPKESTPGEIDTTDVPEGTVWVQV 316
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHF 184
A DS + AL G VY WG+FR + G +G + IQKTP + +S I ++A G++H
Sbjct: 317 VASDSATFALTATGQVYGWGTFRSNEGILGFTRNVLIQKTPALITQLSKIKQLAVGSNHV 376
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + + G +Q QL R R R+ + G +P + K + G Y+
Sbjct: 377 LALDEKNKVFAWGAGQQAQLAR---RLLERDENGALFPASIGTLPGRAKAA-KLACGSYH 432
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
F I +KG ++ +GLNNY++LG ++E G P L+ SL + +A G+HHS
Sbjct: 433 CFIIDTKGRVIGWGLNNYAELG-IEAEAGTDGG-FILKPQLVDSLKEHNIVDIAGGEHHS 490
Query: 304 LALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQDKTITSI 349
LA N +G++ +GR D ++G K+ + +P +P ++ K I +
Sbjct: 491 LATNDKGELLTWGRIDGHQVGHPSGSFTEENTIFDEKDKPRILVQPAVVPDIEGK-IVHV 549
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
A G SFAI +G +Y WG YQ G G DDI
Sbjct: 550 AAGTDHSFAITEDGKVYSWGFSANYQTGQGTTDDI 584
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 176/404 (43%), Gaps = 80/404 (19%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRS 211
K P ++SGIV++A G H LT +LT G +QG LGR T +
Sbjct: 224 KRPRINHNLSGIVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWDGGLRDADAESD 283
Query: 212 ASRNARRGMSFLE--PGE-----VPLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNYS 262
+ G++ E PGE VP + V + +++ G + +G +N
Sbjct: 284 SEDEDDTGLNPKESTPGEIDTTDVPEGTVWVQVVASDSATFALTATGQVYGWGTFRSNEG 343
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG + +QK TP LI LS K LA G +H LAL+ + K++A+G
Sbjct: 344 ILGFTRNVLIQK-------TPALITQLS--KIKQLAVGSNHVLALDEKNKVFAWGAGQQA 394
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKTITS-IACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+L L+ P I +L + + +ACG+ F ID++G + GWG+ N +LG
Sbjct: 395 QLARRLLERDENGALFPASIGTLPGRAKAAKLACGSYHCFIIDTKGRVIGWGLNNYAELG 454
Query: 378 -------------------NGKEDDIL------------NSEGKIYAFGRHDYGRLGL-- 404
+ KE +I+ N +G++ +GR D ++G
Sbjct: 455 IEAEAGTDGGFILKPQLVDSLKEHNIVDIAGGEHHSLATNDKGELLTWGRIDGHQVGHPS 514
Query: 405 ------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
K+ + +P +P ++ K I +A G SFAI +G +Y WG
Sbjct: 515 GSFTEENTIFDEKDKPRILVQPAVVPDIEGK-IVHVAAGTDHSFAITEDGKVYSWGFSAN 573
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YQ G G DDI P I+ + + ++ +GGQ+S++ A+PK
Sbjct: 574 YQTGQGTTDDIETPTLIDNSAIRDRKIIFAGAGGQYSILGAEPK 617
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
K I++ T V + F+ +G+ GL + G+ +V++ P + +LS
Sbjct: 185 KVINEAPTKVMDIFVFGEGTSGELGLGSLKYDGKKPIDVKR--------PRINHNLS--G 234
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIAC 351
+A G H AL + KI +G +D G LG + + + +D+ T +
Sbjct: 235 IVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWDGGLRDADAESDSEDEDDTGLNP 294
Query: 352 GNCVSFAIDSEGVLYG--WGMGNGYQLGNGKEDDILNSEGKIYAFG--RHDYGRLGL-KN 406
ID+ V G W + + L + G++Y +G R + G LG +N
Sbjct: 295 KESTPGEIDTTDVPEGTVWVQ----VVASDSATFALTATGQVYGWGTFRSNEGILGFTRN 350
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
V + + TP Q I +A G+ A+D + ++ WG G QL
Sbjct: 351 V---LIQKTPALITQLSKIKQLAVGSNHVLALDEKNKVFAWGAGQQAQL 396
>gi|336466175|gb|EGO54340.1| hypothetical protein NEUTE1DRAFT_131894 [Neurospora tetrasperma
FGSC 2508]
gi|350286974|gb|EGZ68221.1| RCC1/BLIP-II [Neurospora tetrasperma FGSC 2509]
Length = 617
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 193/395 (48%), Gaps = 56/395 (14%)
Query: 39 VLTCGQGDTGQLGLGP------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G +G+LGLG ++ K + +L +V+V GGMH LT+D K+ T
Sbjct: 196 IFVFGEGTSGELGLGSLKYDGKKPIDVKRPRINHNLSGIVQVACGGMHVAALTKDNKILT 255
Query: 93 WGCNDEGALGR-----------EAEGDSEFIPQTVNLPKKA----------------VQI 125
WG ND+GALGR +AE DSE T PK++ VQ+
Sbjct: 256 WGVNDQGALGRDTTWDGGLRDADAESDSEDEDDTGLNPKESTPGEIDTTDVPEGTVWVQV 315
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHF 184
A DS + AL G VY WG+FR + G +G + IQKTP + +S I ++A G++H
Sbjct: 316 VASDSATFALTATGQVYGWGTFRSNEGILGFTRNVLIQKTPALITQLSKIKQLAVGSNHV 375
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + + G +Q QL R R R+ + G +P + K + G Y+
Sbjct: 376 LALDEKNKVFAWGAGQQAQLAR---RLLERDENGALFPASIGTLPGRAKAA-KLACGSYH 431
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
F I +KG ++ +GLNNY++LG ++E G P L+ SL + +A G+HHS
Sbjct: 432 CFIIDTKGRVIGWGLNNYAELG-IEAEAGTDGG-FILKPQLVDSLKEHNIVDIAGGEHHS 489
Query: 304 LALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQDKTITSI 349
LA N +G++ +GR D ++G K+ + +P +P ++ K I +
Sbjct: 490 LATNDKGELLTWGRIDGHQVGHPSGSFTEENTIFDEKDKPRILVQPAVVPDIEGK-IVHV 548
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
A G SFAI +G +Y WG YQ G G DDI
Sbjct: 549 AAGTDHSFAITEDGKVYSWGFSANYQTGQGTTDDI 583
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 175/404 (43%), Gaps = 80/404 (19%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRS 211
K P ++SGIV++A G H LT +LT G +QG LGR T +
Sbjct: 223 KRPRINHNLSGIVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWDGGLRDADAESD 282
Query: 212 ASRNARRGMSFLE--PGE-----VPLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNYS 262
+ G++ E PGE VP + V + +++ G + +G +N
Sbjct: 283 SEDEDDTGLNPKESTPGEIDTTDVPEGTVWVQVVASDSATFALTATGQVYGWGTFRSNEG 342
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG + +QK TP LI LS K LA G +H LAL+ + K++A+G
Sbjct: 343 ILGFTRNVLIQK-------TPALITQLS--KIKQLAVGSNHVLALDEKNKVFAWGAGQQA 393
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+L L+ P I +L + +ACG+ F ID++G + GWG+ N +LG
Sbjct: 394 QLARRLLERDENGALFPASIGTLPGRAKAAKLACGSYHCFIIDTKGRVIGWGLNNYAELG 453
Query: 378 -------------------NGKEDDIL------------NSEGKIYAFGRHDYGRLGL-- 404
+ KE +I+ N +G++ +GR D ++G
Sbjct: 454 IEAEAGTDGGFILKPQLVDSLKEHNIVDIAGGEHHSLATNDKGELLTWGRIDGHQVGHPS 513
Query: 405 ------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
K+ + +P +P ++ K I +A G SFAI +G +Y WG
Sbjct: 514 GSFTEENTIFDEKDKPRILVQPAVVPDIEGK-IVHVAAGTDHSFAITEDGKVYSWGFSAN 572
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YQ G G DDI P I+ + + ++ +GGQ+S++ A+PK
Sbjct: 573 YQTGQGTTDDIETPTLIDNSAIRDRKIIFAGAGGQYSILGAEPK 616
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
K I++ T V + F+ +G+ GL + G+ +V++ P + +LS
Sbjct: 184 KVINEAPTKVMDIFVFGEGTSGELGLGSLKYDGKKPIDVKR--------PRINHNLS--G 233
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIAC 351
+A G H AL + KI +G +D G LG + + + +D+ T +
Sbjct: 234 IVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWDGGLRDADAESDSEDEDDTGLNP 293
Query: 352 GNCVSFAIDSEGVLYG--WGMGNGYQLGNGKEDDILNSEGKIYAFG--RHDYGRLGL-KN 406
ID+ V G W + + L + G++Y +G R + G LG +N
Sbjct: 294 KESTPGEIDTTDVPEGTVWVQ----VVASDSATFALTATGQVYGWGTFRSNEGILGFTRN 349
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
V + + TP Q I +A G+ A+D + ++ WG G QL
Sbjct: 350 V---LIQKTPALITQLSKIKQLAVGSNHVLALDEKNKVFAWGAGQQAQL 395
>gi|260950135|ref|XP_002619364.1| hypothetical protein CLUG_00523 [Clavispora lusitaniae ATCC 42720]
gi|238846936|gb|EEQ36400.1| hypothetical protein CLUG_00523 [Clavispora lusitaniae ATCC 42720]
Length = 535
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 205/427 (48%), Gaps = 63/427 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLK----CKTGGGVVLTCGQGDTGQLGLGPDVMERKT----- 61
K+A++ + V + +P + KT + G G +LGLGPD ++
Sbjct: 62 KRAKSTASSVLHSYSRLPDINNHPVTKTKPLNIFVWGTGSMCELGLGPDAKTKEVKRPRL 121
Query: 62 --FALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG---------- 107
F E + D +V+ VGGMH + L + V++WG ND LGR+
Sbjct: 122 NPFLTSEKIKADGIVDFAVGGMHVLALDSNNNVWSWGTNDSKVLGRDTSNAKENLKSMDK 181
Query: 108 -----------DSEFIPQTV-NLPK---KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
++E P V NLPK VQ++A D+ S L +G VYAWG+FR + G
Sbjct: 182 DDSDDEDGDLNEAESTPGMVENLPKIDAHIVQLAATDNLSAILYSNGDVYAWGTFRCNEG 241
Query: 153 SMGL-KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G K +Q+TP+KL S+ IV++A+G DH + L ++G + G +Q QLGR
Sbjct: 242 MLGFSKSTRVQETPIKLASLKNIVQLAAGKDHVLALDTKGIVYAWGNGQQFQLGRRILE- 300
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
R ++ LEP + L I + +G ++ F I ++ +GLN + Q G D
Sbjct: 301 -----RHRLAALEPQQFGLY--DIKYISSGDFHCFAIDRDDNVYTWGLNQFGQCGITDEN 353
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + P LI L D K +A G+HH+LAL+S G +Y++GR+D +G+
Sbjct: 354 GELEDGSLIVKPTLIPKLKDLKIIEIAGGEHHTLALSSNGDVYSWGRYDMKEIGIPADKL 413
Query: 331 P-------------VTEPTPIPSLQDKTI--TSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
P V EPT I ++ + +IA G+ SFA+ +G++Y WG G+ Y
Sbjct: 414 PDSTYKDQHGKPRSVPEPTRIEFANNEQVKMKTIAAGSHHSFAVTVDGMVYSWGFGDTYA 473
Query: 376 LGNGKED 382
G G D
Sbjct: 474 PGLGPID 480
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 163/394 (41%), Gaps = 93/394 (23%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE-------- 224
GIV A G H + L S N+ + G + LGR T NA+ + ++
Sbjct: 134 GIVDFAVGGMHVLALDSNNNVWSWGTNDSKVLGRDTS-----NAKENLKSMDKDDSDDED 188
Query: 225 ---------PGEV---PLKRKHIDDVF-TGVYNTFISSKGSILAFGLN--NYSQLGEADS 269
PG V P HI + T + + S G + A+G N LG + S
Sbjct: 189 GDLNEAESTPGMVENLPKIDAHIVQLAATDNLSAILYSNGDVYAWGTFRCNEGMLGFSKS 248
Query: 270 -EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRLGL 325
VQ+ TP IK S K LA+G+ H LAL+++G +YA+G + GR L
Sbjct: 249 TRVQE-------TP--IKLASLKNIVQLAAGKDHVLALDTKGIVYAWGNGQQFQLGRRIL 299
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKE 381
+ EP L D I I+ G+ FAID + +Y WG+ Q G NG+
Sbjct: 300 ERHRLAALEPQQF-GLYD--IKYISSGDFHCFAIDRDDNVYTWGLNQFGQCGITDENGEL 356
Query: 382 DD-----------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP-- 410
+D L+S G +Y++GR+D +G+ P
Sbjct: 357 EDGSLIVKPTLIPKLKDLKIIEIAGGEHHTLALSSNGDVYSWGRYDMKEIGIPADKLPDS 416
Query: 411 -----------VTEPTPIPSLQDKTIT--SIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
V EPT I ++ + +IA G+ SFA+ +G++Y WG G+ Y G
Sbjct: 417 TYKDQHGKPRSVPEPTRIEFANNEQVKMKTIAAGSHHSFAVTVDGMVYSWGFGDTYAPGL 476
Query: 458 GKED-DILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G D D+ +P +I + + +GGQ SV
Sbjct: 477 GPIDGDVEKPTRIVNTATKEMDIQIIGAGGQFSV 510
>gi|442749893|gb|JAA67106.1| Putative regulator of chromosome condensation 1 [Ixodes ricinus]
Length = 244
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 27 VPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
VP K + G + G GD GQLGLGPD++E+ ALV +VV+VV GGMH++ L+
Sbjct: 48 VPKAKRRELVGQAYSLGTGDMGQLGLGPDIVEKSRPALVPGHTDVVDVVAGGMHSLLLSS 107
Query: 87 DGKVYTWGCNDEGALGREAE--GDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
GKV+++GCNDEGALGR SE P V LP+ +SAGDSHS AL G V+ W
Sbjct: 108 TGKVFSFGCNDEGALGRPTSTLDGSETTPGAVELPEPVTHVSAGDSHSAALTVSGAVFVW 167
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
GSFRDS+G MGL G + P + GIV+IASG+DH V+L+ G LLT G EQGQL
Sbjct: 168 GSFRDSNGFMGLLAAG-KSEPKPVRIAEGIVQIASGSDHLVLLSKDGRLLTLGGAEQGQL 226
Query: 205 GRITQRSASRNARRGM 220
GR+ + ASR R+G+
Sbjct: 227 GRVARFFASRGGRKGV 242
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 43/191 (22%)
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G+ Y+ G D G+LGL + P +P D + + G S
Sbjct: 58 GQAYSLGTGDMGQLGLGPDIVEKSRPALVPGHTD--VVDVVAGGMHSL------------ 103
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+L+S GK+++FG +D G LG + +E TP + +T ++
Sbjct: 104 --------------LLSSTGKVFSFGCNDEGALGRPTSTLDGSETTPGAVELPEPVTHVS 149
Query: 430 CGNCVSFAIDSEGVLYGWGM---GNGYQ--LGNGKEDDILEPMKI-EGKQLNNYTVLQVA 483
G+ S A+ G ++ WG NG+ L GK + +P++I EG ++Q+A
Sbjct: 150 AGDSHSAALTVSGAVFVWGSFRDSNGFMGLLAAGKSEP--KPVRIAEG-------IVQIA 200
Query: 484 SGGQHSVILAK 494
SG H V+L+K
Sbjct: 201 SGSDHLVLLSK 211
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + G + QLG V+KS P L+ +D + +G HSL L+S G
Sbjct: 58 GQAYSLGTGDMGQLGLGPDIVEKS------RPALVPGHTD--VVDVVAGGMHSLLLSSTG 109
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
K+++FG +D G LG + +E TP + +T ++ G+ S A+ G ++ WG
Sbjct: 110 KVFSFGCNDEGALGRPTSTLDGSETTPGAVELPEPVTHVSAGDSHSAALTVSGAVFVWGS 169
Query: 371 ---GNGYQ--LGNGKEDD--------------------ILNSEGKIYAFGRHDYGRLG 403
NG+ L GK + +L+ +G++ G + G+LG
Sbjct: 170 FRDSNGFMGLLAAGKSEPKPVRIAEGIVQIASGSDHLVLLSKDGRLLTLGGAEQGQLG 227
>gi|448116941|ref|XP_004203136.1| Piso0_000737 [Millerozyma farinosa CBS 7064]
gi|359384004|emb|CCE78708.1| Piso0_000737 [Millerozyma farinosa CBS 7064]
Length = 517
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/427 (31%), Positives = 206/427 (48%), Gaps = 62/427 (14%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHT 81
K KT V G G +LGLGP ++ F E L +V+ V GGMHT
Sbjct: 67 KTKTQKLDVFVWGTGSMCELGLGPSAKTKEVKRPRLNPFLTEEHLGGSKIVDFVAGGMHT 126
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFI---------------------PQTV-NLP 119
+ L ++++WG ND G LGR+ E + P V NLP
Sbjct: 127 LALDSKNRLWSWGGNDSGVLGRDTSKAKEVLKDMDSEDEDDEDADLNEQESTPGLVENLP 186
Query: 120 K---KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGI 174
K K VQI+A D+ S L ++G VYAWG FR + G +G + I QK+P K++ + I
Sbjct: 187 KTSAKIVQIAATDNLSAVLYDNGDVYAWGCFRCNEGLLGFLRDEIKLQKSPKKIDQLKNI 246
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V++ G DH + L ++G + G +Q QLGR R R+ R LEP + L +
Sbjct: 247 VQLCGGKDHILALDTKGIVYAWGNGQQFQLGR---RILERHRFRA---LEPQQFGLY--N 298
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I + +G ++ F I + + A+GLN + Q +S+ + + P LI LS+K
Sbjct: 299 IKYIASGDFHCFAIDQEDQVYAWGLNQFGQCALTNSQGELEDGSLITKPTLIDELSNKNI 358
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-------------VTEPTPIPS 340
+++G+HHS+AL + G++ ++GR+D LG+ + P V PT I
Sbjct: 359 VQISAGEHHSMALTASGEVLSWGRYDMKELGIPEENLPDYAFKDAHGNVRSVPRPTEIRL 418
Query: 341 LQDKTI--TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY--AFGR 396
+ +I +IACG+ SFA+ +G +Y WG G+ Y G G DD + +I A
Sbjct: 419 VAKSSIKCKAIACGSHHSFAVTEDGFVYAWGFGDTYAPGLGPLDDDVEKPTRIVNTATKH 478
Query: 397 HDYGRLG 403
HD +G
Sbjct: 479 HDILLIG 485
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 55/286 (19%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS---EVQKSG------------NT 277
K +D V G++ + SK + ++G N+ LG S EV K N
Sbjct: 115 KIVDFVAGGMHTLALDSKNRLWSWGGNDSGVLGRDTSKAKEVLKDMDSEDEDDEDADLNE 174
Query: 278 CFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVT 333
TP L+++L + K +A+ + S L G +YA+G R + G LG E
Sbjct: 175 QESTPGLVENLPKTSAKIVQIAATDNLSAVLYDNGDVYAWGCFRCNEGLLGFLR-DEIKL 233
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
+ +P Q K I + G A+D++G++Y WG G +QLG IL +
Sbjct: 234 QKSPKKIDQLKNIVQLCGGKDHILALDTKGIVYAWGNGQQFQLGR----RILER----HR 285
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
F + + GL N I IA G+ FAID E +Y WG+
Sbjct: 286 FRALEPQQFGLYN------------------IKYIASGDFHCFAIDQEDQVYAWGLNQFG 327
Query: 454 QLG----NGKEDD---ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
Q G+ +D I +P I+ +L+N ++Q+++G HS+ L
Sbjct: 328 QCALTNSQGELEDGSLITKPTLID--ELSNKNIVQISAGEHHSMAL 371
>gi|407927258|gb|EKG20156.1| Regulator of chromosome condensation RCC1 [Macrophomina phaseolina
MS6]
Length = 603
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 190/402 (47%), Gaps = 68/402 (16%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALV-EDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G+G +G+LGLG DV + L+ D VV++ GGMH + LT D K+ +
Sbjct: 172 VYVFGEGSSGELGLGTAKNAVDVKRPRLNPLLPADSVGVVQIAAGGMHVLALTHDNKILS 231
Query: 93 WGCNDEGALGREA-----------------------------EGDSEFIPQTVNLPK--K 121
WG ND+GALGR+ E IP+ P+ K
Sbjct: 232 WGVNDQGALGRDTNWEGGLVDIDDNKSDDSSDSGSDSGMNPKEATPTAIPEDA-FPEGTK 290
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASG 180
VQ++A DS S A+ +DG VY WG+FR + G G K IQKTP+ + + I + G
Sbjct: 291 FVQVAAADSASFAVTDDGLVYGWGTFRSNEGIFGFSKDSFIQKTPVLIPQLKKIRNVVCG 350
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
A+H + L + GN+ G +Q QLGR R R G L P E L R+ I +
Sbjct: 351 ANHVLALDADGNVFAWGSGQQNQLGR---RVVERTKTEG---LVPREFGLPRRKIAQIAC 404
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G Y++F K G + A+GLNN+ + G D+ + P + +LSDKK + G
Sbjct: 405 GSYHSFAVEKTGKVWAWGLNNFGETGIPDNAGEDDAVILKAAP--VPALSDKKIKNIDGG 462
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLG-----LKNVSEPVTE------------PTPIPSLQ 342
HHS A+ +GK +GR D ++G LK++ E + PT IP++
Sbjct: 463 GHHSAAVTEDGKCLVWGRLDGYQMGLPMDTLKSMGEDKIKKDEHDRPRILKVPTEIPNIN 522
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++CG+ + AI EG Y WG YQ G G +DDI
Sbjct: 523 ---ADFVSCGHDHNIAISKEGKAYSWGFSANYQTGQGTDDDI 561
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 26/281 (9%)
Query: 221 SFLEPGEVPLKR-KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
SF++ V + + K I +V G + + + G++ A+G +QLG V + T
Sbjct: 329 SFIQKTPVLIPQLKKIRNVVCGANHVLALDADGNVFAWGSGQQNQLGR---RVVERTKTE 385
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEP---VTE 334
P L +K +A G +HS A+ GK++A+G +++G G+ N E + +
Sbjct: 386 GLVPREF-GLPRRKIAQIACGSYHSFAVEKTGKVWAWGLNNFGETGIPDNAGEDDAVILK 444
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS--EGKIY 392
P+P+L DK I +I G S A+ +G WG +GYQ+G D L S E KI
Sbjct: 445 AAPVPALSDKKIKNIDGGGHHSAAVTEDGKCLVWGRLDGYQMGLPM--DTLKSMGEDKIK 502
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
HD R+ + PT IP++ ++CG+ + AI EG Y WG
Sbjct: 503 K-DEHDRPRI--------LKVPTEIPNIN---ADFVSCGHDHNIAISKEGKAYSWGFSAN 550
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
YQ G G +DDI I+ + + +GGQ+S++ A
Sbjct: 551 YQTGQGTDDDIEVATMIDNTAVREKKLNWAGAGGQYSILTA 591
>gi|258577767|ref|XP_002543065.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903331|gb|EEP77732.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 577
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 193/399 (48%), Gaps = 66/399 (16%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALVE-DLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G+G +G+LGLG DV + AL+ D VV++ GGMH V LT D K+ T
Sbjct: 137 VYVFGEGSSGELGLGVAKNAVDVKRPRLNALLAADTVGVVQIATGGMHCVALTHDNKILT 196
Query: 93 WGCNDEGALGREA--EGD-----------------------SEFIPQTV---NLPKKA-- 122
WG ND+GALGR+ EG E IP + + P+
Sbjct: 197 WGVNDQGALGRDTTWEGKLKDIDAGSDDDDSDADSDSGLNPKESIPTEIPTDSFPEGTVF 256
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGA 181
V+++AGDS S AL +DG VY WG+FR + G +G +Q TP + S+ I IA G
Sbjct: 257 VEVAAGDSSSFALTDDGRVYGWGTFRGNEGILGFDATNRVQATPALIPSLKKIQHIACGD 316
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
+H + L +G + G +Q QLG RI +R+ ++ L P E L K+I +
Sbjct: 317 NHALALDVKGAVFAWGSGQQNQLGRRIVERTK-------LNGLHPREFGLP-KNITHIGC 368
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +++F I G + ++GLN+Y + G S P ++KSLSDK L G
Sbjct: 369 GAFHSFAIHQSGKVYSWGLNSYGETGIPQG--AGSDEAVVLRPEVVKSLSDKDVIQLCGG 426
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDKT 345
HHSLA+ EG+ A+GR D + GL + P ++ PT IP ++ K
Sbjct: 427 SHHSLAVTREGECLAWGRVDGFQTGLNVETLPEESVIKDDRGRARILSTPTAIPDIKAKF 486
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G S AI +G + WG YQ G G +DDI
Sbjct: 487 ---VAAGADHSIAIAQDGRAWSWGFSANYQTGQGTDDDI 522
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 178/444 (40%), Gaps = 115/444 (25%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLE----------SVSGIVKIASGADHFVMLTSR 190
VY +G GS G G G+ K + ++ G+V+IA+G H V LT
Sbjct: 137 VYVFG-----EGSSGELGLGVAKNAVDVKRPRLNALLAADTVGVVQIATGGMHCVALTHD 191
Query: 191 GNLLTAGCPEQGQLGRIT--------------------QRSASRNARRGMSFLEPGEVPL 230
+LT G +QG LGR T + N + + P E+P
Sbjct: 192 NKILTWGVNDQGALGRDTTWEGKLKDIDAGSDDDDSDADSDSGLNPKESI----PTEIPT 247
Query: 231 KRKHIDDVF----TGVYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTP 282
VF G ++F ++ G + +G N LG +A + VQ TP
Sbjct: 248 DSFPEGTVFVEVAAGDSSSFALTDDGRVYGWGTFRGNEGILGFDATNRVQA-------TP 300
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
LI SL KK +A G +H+LAL+ +G ++A+G +LG + + E T + L
Sbjct: 301 ALIPSL--KKIQHIACGDNHALALDVKGAVFAWGSGQQNQLGRR-----IVERTKLNGLH 353
Query: 343 D------KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL------- 385
K IT I CG SFAI G +Y WG+ + G G G ++ ++
Sbjct: 354 PREFGLPKNITHIGCGAFHSFAIHQSGKVYSWGLNSYGETGIPQGAGSDEAVVLRPEVVK 413
Query: 386 --------------------NSEGKIYAFGRHDYGRLGLKNVSEP--------------V 411
EG+ A+GR D + GL + P +
Sbjct: 414 SLSDKDVIQLCGGSHHSLAVTREGECLAWGRVDGFQTGLNVETLPEESVIKDDRGRARIL 473
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ PT IP ++ K + A G S AI +G + WG YQ G G +DDI I+
Sbjct: 474 STPTAIPDIKAKFV---AAGADHSIAIAQDGRAWSWGFSANYQTGQGTDDDIEVATVIDN 530
Query: 472 KQLNNYTVLQVASGGQHSVILAKP 495
+ T+ +GGQ+S+I P
Sbjct: 531 TAVRGKTLNWAGAGGQYSIITGLP 554
>gi|346327098|gb|EGX96694.1| Ran exchange factor Prp20/Pim1, putative [Cordyceps militaris CM01]
Length = 628
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 195/405 (48%), Gaps = 71/405 (17%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD---------NVVEVVVGGMHTVCLTEDGK 89
+ G GD G+LGLGP E T + LD VV+V GGMHTV LT D +
Sbjct: 201 IFPFGNGDMGELGLGPSTTEALTPCVNPYLDASSGSSPKPRVVQVACGGMHTVVLTSDNE 260
Query: 90 VYTWGCNDEGALGREAEGD--------------------SEFIPQTV---NLPK--KAVQ 124
+ TWG ND ALGR+ E D E IP V + P + VQ
Sbjct: 261 IITWGVNDNWALGRDTEWDGVWRDEKQDSGDEEEGELNPHESIPAVVPAASFPPGTRFVQ 320
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHG--SMGLKGEG----IQKTPLKLESVSGIVKIA 178
++AGDS S AL G VY WG+FR++ G G G QKTP + ++ IV+IA
Sbjct: 321 VAAGDSCSFALTSHGLVYGWGTFRNASGDDEFGYDSRGQLIVKQKTPTCIVGLTKIVQIA 380
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
GA+H + L +G++ G EQ QLGR R RR L+P V + R +
Sbjct: 381 CGANHALALDVKGSVWGWGAHEQNQLGR-------RLLRRHQEHLKPRLVQVCRGRAKYI 433
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTML 296
+G Y++F I K ++ A+GLN++ GEA G++ P +I+ L K T+L
Sbjct: 434 ASGEYHSFAIDHKDNVWAWGLNSF---GEAGYAKDAGGDSAVLPYPMMIRDLCGKGVTVL 490
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-----------------PTPIP 339
A G HHS A+ +GK +GR D G+LG++ +E + PT I
Sbjct: 491 AGGAHHSAAVTMDGKCLVWGRMDGGQLGIRFTTEQLENKDLIRYDERDKPRICLCPTIIT 550
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
S+ D +ACG + ++ +G+ Y G G+ QLG G + D+
Sbjct: 551 SIGDA--VHVACGTDHTIFVNKDGIAYTTGFGSSGQLGLGSQRDV 593
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 158/388 (40%), Gaps = 71/388 (18%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS-ASRNARRGMSFLEPGEVPLKR 232
+V++A G H V+LTS ++T G + LGR T+ R+ ++ E GE+
Sbjct: 242 VVQVACGGMHTVVLTSDNEIITWGVNDNWALGRDTEWDGVWRDEKQDSGDEEEGELNPHE 301
Query: 233 KHIDDVFTGVY---NTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCF--------- 279
V + F+ + G +F L ++ + + SG+ F
Sbjct: 302 SIPAVVPAASFPPGTRFVQVAAGDSCSFALTSHGLVYGWGTFRNASGDDEFGYDSRGQLI 361
Query: 280 ---FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
TP I L+ K +A G +H+LAL+ +G ++ +G H+ +LG + +
Sbjct: 362 VKQKTPTCIVGLT--KIVQIACGANHALALDVKGSVWGWGAHEQNQLGRRLLRRHQEHLK 419
Query: 337 P-IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL------ 385
P + + IA G SFAID + ++ WG+ + GY G + +L
Sbjct: 420 PRLVQVCRGRAKYIASGEYHSFAIDHKDNVWAWGLNSFGEAGYAKDAGGDSAVLPYPMMI 479
Query: 386 ---------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTE----------- 413
+GK +GR D G+LG++ +E +
Sbjct: 480 RDLCGKGVTVLAGGAHHSAAVTMDGKCLVWGRMDGGQLGIRFTTEQLENKDLIRYDERDK 539
Query: 414 ------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
PT I S+ D +ACG + ++ +G+ Y G G+ QLG G + D+
Sbjct: 540 PRICLCPTIITSIGDAV--HVACGTDHTIFVNKDGIAYTTGFGSSGQLGLGSQRDVEVAR 597
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAKP 495
+++ L + V +GGQ S ILA P
Sbjct: 598 QVQRNDLFDTAVTWAGAGGQFS-ILAGP 624
>gi|336270150|ref|XP_003349834.1| hypothetical protein SMAC_00722 [Sordaria macrospora k-hell]
gi|380095223|emb|CCC06696.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 620
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 194/395 (49%), Gaps = 56/395 (14%)
Query: 39 VLTCGQGDTGQLGLGP------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G +G+LGLG ++ K + +L VV+V GGMH LT+D K+ T
Sbjct: 199 IFVFGEGTSGELGLGSMKYDGKKPIDVKRPRINHNLSGVVQVACGGMHVAALTKDNKILT 258
Query: 93 WGCNDEGALGREAE----------------------GDSEFIP---QTVNLPKKA--VQI 125
WG ND+GALGR+ E P T ++P+ VQ+
Sbjct: 259 WGVNDQGALGRDTTWAGGLRDADEESDSDDDDDTGLNPKESTPGEIDTTDVPEGTTWVQV 318
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHF 184
A DS + AL G V+ WG+FR + G +G K +Q TP + +S I ++A G++H
Sbjct: 319 VASDSATFALTATGHVFGWGTFRSNEGILGFTKDVMVQTTPALVTQLSKIKQLAVGSNHV 378
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + + G +QGQLGR R R+ G+ G +P + K + G Y+
Sbjct: 379 LALDEKNKVFAWGAGQQGQLGR---RLIERDGNGGLYPASIGTLPGRAKAA-KIACGSYH 434
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+F I +KG ++A+GLNNY++LG ++E G P L+ SL + +A G+HHS
Sbjct: 435 SFIIDTKGRVIAWGLNNYAELG-VETEAGTDGG-FNLKPQLVDSLKEYNIVDIAGGEHHS 492
Query: 304 LALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPSLQDKTITSI 349
LA N +G++ +GR D ++G K+ + +P +P ++ K I +
Sbjct: 493 LAANDKGELLTWGRIDGHQVGHPSGSFTEENTIFDEKDKPRILVQPAVVPEIEGK-IVHV 551
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
A G SFAI +G +Y WG YQ G G DDI
Sbjct: 552 AAGTDHSFAITEDGKVYSWGFSANYQTGQGTTDDI 586
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 176/404 (43%), Gaps = 80/404 (19%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA---------- 212
K P ++SG+V++A G H LT +LT G +QG LGR T +
Sbjct: 226 KRPRINHNLSGVVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWAGGLRDADEESD 285
Query: 213 -SRNARRGMSFLE--PGE-----VPLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNYS 262
+ G++ E PGE VP + V + +++ G + +G +N
Sbjct: 286 SDDDDDTGLNPKESTPGEIDTTDVPEGTTWVQVVASDSATFALTATGHVFGWGTFRSNEG 345
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG D VQ TP L+ LS K LA G +H LAL+ + K++A+G G
Sbjct: 346 ILGFTKDVMVQT-------TPALVTQLS--KIKQLAVGSNHVLALDEKNKVFAWGAGQQG 396
Query: 322 RLGLKNVSEPVT---EPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+LG + + P I +L + IACG+ SF ID++G + WG+ N +LG
Sbjct: 397 QLGRRLIERDGNGGLYPASIGTLPGRAKAAKIACGSYHSFIIDTKGRVIAWGLNNYAELG 456
Query: 378 -------------------NGKEDDIL------------NSEGKIYAFGRHDYGRLGL-- 404
+ KE +I+ N +G++ +GR D ++G
Sbjct: 457 VETEAGTDGGFNLKPQLVDSLKEYNIVDIAGGEHHSLAANDKGELLTWGRIDGHQVGHPS 516
Query: 405 ------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
K+ + +P +P ++ K I +A G SFAI +G +Y WG
Sbjct: 517 GSFTEENTIFDEKDKPRILVQPAVVPEIEGK-IVHVAAGTDHSFAITEDGKVYSWGFSAN 575
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YQ G G DDI P I+ + + ++ +GGQ+S++ A+PK
Sbjct: 576 YQTGQGTTDDIETPTLIDNSAIRDRKIIFAGAGGQYSILGAEPK 619
>gi|310799740|gb|EFQ34633.1| GDP/GTP exchange factor [Glomerella graminicola M1.001]
Length = 684
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 196/404 (48%), Gaps = 73/404 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVE-----------DLDNVVEVVVGGMHTVCLTED 87
+ G+G +G+LGLG ++ K V+ D+ VV++ GGMH LT+D
Sbjct: 239 IYVFGEGSSGELGLGSRKLDGKKVVDVKRPRLNPHLSAKDV-GVVQIACGGMHVAALTKD 297
Query: 88 GKVYTWGCNDEGALGREAEGD----------------------SEFIPQTVN----LPK- 120
K+ TWG ND+GALGR+ D E P V P+
Sbjct: 298 NKILTWGVNDQGALGRDTNWDGGLRDADAEEEEEDDDDSGINPRESTPTAVGAEYFAPEA 357
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIAS 179
K Q+ A DS + AL EDG VY WG+FR S G +G + IQKTP L ++ I +A+
Sbjct: 358 KFTQVVASDSATFALTEDGRVYGWGTFRSSDGILGFTEKIQIQKTPEYLPTLKNITALAA 417
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G++H + L +G ++ GC +Q QLGR R RN ++ L P + + + I+ +
Sbjct: 418 GSNHILALDDKGVVVAWGCGQQNQLGR---RIIERNK---LASLVPQSMGIPKGKINRIA 471
Query: 240 TGVYNTFISSK-GSILAFGLNNYSQL------GEADSEVQKSGNTCFFTPHLIKSLSDKK 292
G Y++F +K GS+ A+GLNN+++ GE D+ V P +++SL D K
Sbjct: 472 CGSYHSFALAKDGSVWAWGLNNFAETGIEMGAGEDDAVV--------LRPTVVESLKDYK 523
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP----VTEPTPIPSLQDKTITS 348
+A G+HHSLA +GK+ +GR D ++G+ P + + + P + K
Sbjct: 524 VKQIAGGEHHSLACTEDGKLLTWGRLDGHQVGIPVEELPEDRVIKDESNNPRILSKPTVV 583
Query: 349 IACGNCV--------SFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
CV +FAID +G + WG YQ G G +DI
Sbjct: 584 EDIAKCVYVAAGVDNNFAIDDKGEAHSWGFSANYQTGQGTTEDI 627
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 156/390 (40%), Gaps = 85/390 (21%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-----------------RSASRN 215
G+V+IA G H LT +LT G +QG LGR T + N
Sbjct: 280 GVVQIACGGMHVAALTKDNKILTWGVNDQGALGRDTNWDGGLRDADAEEEEEDDDDSGIN 339
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ--LGEADS-EV 271
R E V TF ++ G + +G S LG + ++
Sbjct: 340 PRESTPTAVGAEYFAPEAKFTQVVASDSATFALTEDGRVYGWGTFRSSDGILGFTEKIQI 399
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
QK TP + +L K T LA+G +H LAL+ +G + A+G +LG +
Sbjct: 400 QK-------TPEYLPTL--KNITALAAGSNHILALDDKGVVVAWGCGQQNQLGRR----- 445
Query: 332 VTEPTPIPSLQDKT-------ITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGK 380
+ E + SL ++ I IACG+ SFA+ +G ++ WG+ N G ++G G+
Sbjct: 446 IIERNKLASLVPQSMGIPKGKINRIACGSYHSFALAKDGSVWAWGLNNFAETGIEMGAGE 505
Query: 381 EDDIL---------------------------NSEGKIYAFGRHDYGRLGLKNVSEP--- 410
+D ++ +GK+ +GR D ++G+ P
Sbjct: 506 DDAVVLRPTVVESLKDYKVKQIAGGEHHSLACTEDGKLLTWGRLDGHQVGIPVEELPEDR 565
Query: 411 -VTEPTPIPSLQDKTITSIACGNCV--------SFAIDSEGVLYGWGMGNGYQLGNGKED 461
+ + + P + K CV +FAID +G + WG YQ G G +
Sbjct: 566 VIKDESNNPRILSKPTVVEDIAKCVYVAAGVDNNFAIDDKGEAHSWGFSANYQTGQGTTE 625
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
DI P I+ + ++ +GGQ+S++
Sbjct: 626 DIETPTTIDNTAVRGKKLIFAGAGGQYSIL 655
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 111/288 (38%), Gaps = 58/288 (20%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
K I+ T + + ++ +GS GL + G+ +V++ PHL S D
Sbjct: 227 KKINSAPTQILDIYVFGEGSSGELGLGSRKLDGKKVVDVKRP----RLNPHL--SAKDVG 280
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN----------------------VSE 330
+A G H AL + KI +G +D G LG ++
Sbjct: 281 VVQIACGGMHVAALTKDNKILTWGVNDQGALGRDTNWDGGLRDADAEEEEEDDDDSGINP 340
Query: 331 PVTEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
+ PT + + + T + + +FA+ +G +YGWG
Sbjct: 341 RESTPTAVGAEYFAPEAKFTQVVASDSATFALTEDGRVYGWGT----------------- 383
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
F R G LG + P +P+L K IT++A G+ A+D +GV+ W
Sbjct: 384 ------F-RSSDGILGFTEKIQIQKTPEYLPTL--KNITALAAGSNHILALDDKGVVVAW 434
Query: 448 GMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G G QLG E + L + + + + ++A G HS LAK
Sbjct: 435 GCGQQNQLGRRIIERNKLASLVPQSMGIPKGKINRIACGSYHSFALAK 482
>gi|255731754|ref|XP_002550801.1| protein RCC1 [Candida tropicalis MYA-3404]
gi|240131810|gb|EER31369.1| protein RCC1 [Candida tropicalis MYA-3404]
Length = 496
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 204/408 (50%), Gaps = 63/408 (15%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKT-------FALVEDLD--NVVEVVVGGMHT 81
K KT + G G +LGLGPD ++ F E L+ +V+ VGGMHT
Sbjct: 47 KTKTTPLDIFVWGTGSMCELGLGPDSKNKEVKRPRLNPFLTEEKLNGTKIVDFAVGGMHT 106
Query: 82 VCLTEDGKVYTWGCNDEGALGREAE----------------------GDSEFIPQTV-NL 118
+ L +V++WG ND G LGR+ ++E P V NL
Sbjct: 107 LALDGKNRVWSWGGNDSGVLGRDTSQAKEVLKDMDADASDDDEDGDLNEAESTPGLVENL 166
Query: 119 PKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGE-GIQKTPLKLESVSGI 174
PK + VQ++A D+ S LL++G VYAWG FR + G +G L+ E IQKTPLK++ + I
Sbjct: 167 PKDSSIVQLAATDNLSAVLLDNGDVYAWGCFRCNEGLLGFLRDEIKIQKTPLKIKELKNI 226
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRK 233
V++A+G DH + L S+G + G +Q QLGR I +R R+ LEP + L
Sbjct: 227 VQLAAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRFRS-------LEPQQFGLY-- 277
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+I + +G ++ F I ++ A+GLN Y Q + + + P +I+ LS K
Sbjct: 278 NIKYIASGDFHCFAIDHADNVYAWGLNQYGQCALTGANGELEDGSVLTKPTIIEELSKLK 337
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-----------EPVTEPTP---- 337
+A+G+HH+LAL +G +Y++GR D +G+ +P + PTP
Sbjct: 338 IKQIAAGEHHTLALTDDGHVYSWGRLDMKEIGIPTDKLPESTFKDQHGKPRSVPTPTKIE 397
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDI 384
+ +D I +I G+ SFA+ +G +Y WG Y +G G DD+
Sbjct: 398 FNAKKDILIKTIGVGSHHSFAVTDDGFVYAWGFAETYGVGLGPSIDDV 445
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 62/271 (22%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ F+ GS+ GL S+ + EV++ F T + L+ K A G H+
Sbjct: 54 DIFVWGTGSMCELGLGPDSK----NKEVKRPRLNPFLTE---EKLNGTKIVDFAVGGMHT 106
Query: 304 LALNSEGKIYAFGRHDYGRLGLKN----------------------VSEPVTEPTPIPSL 341
LAL+ + +++++G +D G LG ++E + P + +L
Sbjct: 107 LALDGKNRVWSWGGNDSGVLGRDTSQAKEVLKDMDADASDDDEDGDLNEAESTPGLVENL 166
Query: 342 -QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
+D +I +A + +S + G +Y WG R + G
Sbjct: 167 PKDSSIVQLAATDNLSAVLLDNGDVYAWGCF------------------------RCNEG 202
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
LG E + TP+ + K I +A G A+DS+G++Y WG G YQLG
Sbjct: 203 LLGFLR-DEIKIQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGR--- 258
Query: 461 DDILEPMK---IEGKQLNNYTVLQVASGGQH 488
ILE + +E +Q Y + +ASG H
Sbjct: 259 -RILERHRFRSLEPQQFGLYNIKYIASGDFH 288
>gi|302666115|ref|XP_003024660.1| mitochondrial protein Fmp25, putative [Trichophyton verrucosum HKI
0517]
gi|291188726|gb|EFE44049.1| mitochondrial protein Fmp25, putative [Trichophyton verrucosum HKI
0517]
Length = 574
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 199/436 (45%), Gaps = 88/436 (20%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL 68
P KV + PT K + V CG+G G+LGLG DV + AL+
Sbjct: 129 RKPKPKVVINK--APTQKLR-----VFVCGEGSQGELGLGAAKGTVDVKRPRLNALLAPE 181
Query: 69 D-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA---------------------- 105
+ VV+V GGMH V LT DG+V TWG ND+GALGR+
Sbjct: 182 NVGVVQVAAGGMHCVALTHDGRVLTWGVNDQGALGRDTTWEGGLKDIDDAKSDDSSDSGS 241
Query: 106 -EGDSEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDS------H 151
G + + +P A VQ++AGDS S AL +DG VY WG+FR++
Sbjct: 242 DSGLNPYESTPTAIPSDAFPEGTVIVQVAAGDSSSFALTDDGLVYGWGTFRNNIANKVVQ 301
Query: 152 GSMGLKG----EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G+ G+ G IQ TP + + I +A G +H + + +RG + G +Q QLGR
Sbjct: 302 GNEGIIGFDADTKIQTTPKLISGLKKITHVACGDNHALAIDNRGAVFAWGSGQQNQLGR- 360
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS---- 262
R RN G L+P E L K+I V G +++F + G + +GLN+Y
Sbjct: 361 --RIVERNKLNG---LQPREFGLP-KNIAHVGCGSFHSFAVHKSGKVYGWGLNSYCETGI 414
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
Q G D E P ++ SL DK + G HH+LA ++G +GR D +
Sbjct: 415 QQGAGDDEA------VILHPTVVDSLKDKSIVQICGGSHHTLARTTDGDCLVWGRLDGFQ 468
Query: 323 LGLK--------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
GLK N + + EPT +P + + +A G S AID+EG + W
Sbjct: 469 SGLKVDTLPDSAVIKDDRNRARVLFEPTAVPGFKAE---YVAAGADHSIAIDNEGRAWTW 525
Query: 369 GMGNGYQLGNGKEDDI 384
G YQ G G +DDI
Sbjct: 526 GFSANYQTGQGTDDDI 541
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 189/441 (42%), Gaps = 120/441 (27%)
Query: 150 SHGSMGL---KGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
S G +GL KG K P L E+V G+V++A+G H V LT G +LT G +Q
Sbjct: 154 SQGELGLGAAKGTVDVKRPRLNALLAPENV-GVVQVAAGGMHCVALTHDGRVLTWGVNDQ 212
Query: 202 GQLGRIT--------------QRSASRNARRGMSFLE--PGEVPLKR----KHIDDVFTG 241
G LGR T S+ + G++ E P +P I V G
Sbjct: 213 GALGRDTTWEGGLKDIDDAKSDDSSDSGSDSGLNPYESTPTAIPSDAFPEGTVIVQVAAG 272
Query: 242 VYNTF-ISSKGSILAFGL--NNYSQ---------LG-EADSEVQKSGNTCFFTPHLIKSL 288
++F ++ G + +G NN + +G +AD+++Q TP LI L
Sbjct: 273 DSSSFALTDDGLVYGWGTFRNNIANKVVQGNEGIIGFDADTKIQT-------TPKLISGL 325
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD----- 343
KK T +A G +H+LA+++ G ++A+G +LG + + E + LQ
Sbjct: 326 --KKITHVACGDNHALAIDNRGAVFAWGSGQQNQLGRR-----IVERNKLNGLQPREFGL 378
Query: 344 -KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL------------- 385
K I + CG+ SFA+ G +YGWG+ + G Q G G ++ ++
Sbjct: 379 PKNIAHVGCGSFHSFAVHKSGKVYGWGLNSYCETGIQQGAGDDEAVILHPTVVDSLKDKS 438
Query: 386 --------------NSEGKIYAFGRHDYGRLGLK--------------NVSEPVTEPTPI 417
++G +GR D + GLK N + + EPT +
Sbjct: 439 IVQICGGSHHTLARTTDGDCLVWGRLDGFQSGLKVDTLPDSAVIKDDRNRARVLFEPTAV 498
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGK 472
P + + +A G S AID+EG + WG YQ G G +DD I++ + GK
Sbjct: 499 PGFKAE---YVAAGADHSIAIDNEGRAWTWGFSANYQTGQGTDDDIEVATIVDNTAVRGK 555
Query: 473 QLNNYTVLQVASGGQHSVILA 493
+LN +GGQ+S+ A
Sbjct: 556 KLNT-----AGAGGQYSIFTA 571
>gi|400597595|gb|EJP65325.1| GDP/GTP exchange factor [Beauveria bassiana ARSEF 2860]
Length = 555
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 191/404 (47%), Gaps = 71/404 (17%)
Query: 39 VLTCGQGDTGQLGLGPDV------MERKTFALVEDLD----NVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG ++ K L ++LD V+++ GGMH LT D
Sbjct: 120 VYVFGEGTSGELGLGSKKVNGKKPIDVKRPRLNDNLDAKSVGVIQIACGGMHVAALTHDH 179
Query: 89 KVYTWGCNDEGALGREAEGD------------------------SEFIPQTVNLP----- 119
K+ TWG ND+GALGR+ D SE P V
Sbjct: 180 KILTWGVNDQGALGRDTTWDGGLKDMDGNESDSDDDDDDTGINPSESTPTAVGEEFFAPG 239
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIA 178
K VQI A DS + L +DG VY WG+FR S G +G + IQ P+ L ++ I +A
Sbjct: 240 TKFVQIVASDSATFVLTQDGRVYGWGTFRSSDGVLGFTESIKIQLRPMLLPTLKNITSLA 299
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G++H + L ++GN+L GC +Q QLGR R RN MS L P + L R I +
Sbjct: 300 AGSNHILALDTKGNVLAWGCGQQNQLGR---RIIERNK---MSSLTPQGMGLPRGKISKI 353
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG---NTCFFTPHLIKSLSDKKFT 294
G Y++F + G + +GLNN+ ++G VQ + + P + L D T
Sbjct: 354 ACGGYHSFALDKNGKLWGWGLNNFGEIG-----VQSNAGEDDAVILKPAKLTDLDDHVIT 408
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGL--------------KNVSEPVTEPTPIPS 340
+ G HHSLA + +GK++ +GR D ++G + + +PT P
Sbjct: 409 DMDGGVHHSLACSDQGKLFTWGRVDGYQVGFEFDELEKEDVIFDERGAPRILVKPTVNPE 468
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ + I ++ G SFAI +G Y WG + YQ G G +DI
Sbjct: 469 VSN--ICAVTAGTDNSFAISKDGKAYSWGFSSNYQTGQGTIEDI 510
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 191/440 (43%), Gaps = 53/440 (12%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK----------KAVQISAGDSHSVALLEDG 139
VY +G G LG ++ + P V P+ +QI+ G H AL D
Sbjct: 120 VYVFGEGTSGELGLGSKKVNGKKPIDVKRPRLNDNLDAKSVGVIQIACGGMHVAALTHDH 179
Query: 140 TVYAWGSF------RDSHGSMGLKG-EGIQKTPLKLESVSGI-----VKIASGADHFVML 187
+ WG RD+ GLK +G + + +GI A G + F
Sbjct: 180 KILTWGVNDQGALGRDTTWDGGLKDMDGNESDSDDDDDDTGINPSESTPTAVGEEFFAPG 239
Query: 188 TSRGNLLTAGCPE--QGQLGRITQRSASRNARRGMSFLEPGEVPLKR------KHIDDVF 239
T ++ + Q GR+ R++ + F E ++ L+ K+I +
Sbjct: 240 TKFVQIVASDSATFVLTQDGRVYGWGTFRSSDGVLGFTESIKIQLRPMLLPTLKNITSLA 299
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G + + +KG++LA+G +QLG E K + TP + L K + +A
Sbjct: 300 AGSNHILALDTKGNVLAWGCGQQNQLGRRIIERNKMSS---LTPQGM-GLPRGKISKIAC 355
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEP---VTEPTPIPSLQDKTITSIACGNC 354
G +HS AL+ GK++ +G +++G +G++ N E + +P + L D IT + G
Sbjct: 356 GGYHSFALDKNGKLWGWGLNNFGEIGVQSNAGEDDAVILKPAKLTDLDDHVITDMDGGVH 415
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
S A +G L+ WG +GYQ+G E D L E I F R+ +K P
Sbjct: 416 HSLACSDQGKLFTWGRVDGYQVGF--EFDELEKEDVI--FDERGAPRILVK--------P 463
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
T P + + I ++ G SFAI +G Y WG + YQ G G +DI P +I+ +
Sbjct: 464 TVNPEVSN--ICAVTAGTDNSFAISKDGKAYSWGFSSNYQTGQGTIEDIKTPTQIDNTAI 521
Query: 475 NNYTVLQVASGGQHSVILAK 494
++ +GGQ SV+ AK
Sbjct: 522 RGKQIIGAGAGGQFSVLFAK 541
>gi|340518879|gb|EGR49119.1| predicted protein [Trichoderma reesei QM6a]
Length = 566
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 188/409 (45%), Gaps = 78/409 (19%)
Query: 39 VLTCGQGDTGQLGLGPDV------MERKTFALVEDLD----NVVEVVVGGMHTVCLTEDG 88
+ G+G +G+LGLG ++ K L E+L VV++ GGMH V LT D
Sbjct: 127 IYVFGEGTSGELGLGSKRVGGKKPIDVKRPRLNENLSAKTVGVVQIACGGMHAVALTRDN 186
Query: 89 KVYTWGCNDEGALGRE----------------------------------AEGDSEFIPQ 114
K+ TWG ND+GALGR+ A + F P
Sbjct: 187 KILTWGVNDQGALGRDTTWEGGLRDADKADDSDSEDEDDTGINPKESTPIALSEDNFAPG 246
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSG 173
T K VQ+ A DS S AL EDG VY WG+FR S G +G + +Q P + +
Sbjct: 247 T-----KFVQVVASDSASFALTEDGRVYGWGTFRSSDGILGFTENVRVQTRPALIAGLKN 301
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +ASGA+H + L +GN++ GC +Q QLGR R RN MS L P V L R
Sbjct: 302 IKALASGANHILALDHKGNVVAWGCGQQNQLGR---RIIERNK---MSSLVPQGVGLPRG 355
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G Y++F I G++ +GLNN+ ++G + + + P I L+D
Sbjct: 356 KIAKIACGSYHSFAIDKDGAVWGWGLNNFGEIGVESNAGED--DAVILKPVKISFLADHT 413
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-----------------KNVSEPVTEP 335
T + G HHSLA +G ++ +GR D ++G + + + +P
Sbjct: 414 VTSIEGGIHHSLACTDKGDLFTWGRVDGYQVGFELEEIDKVDEEYVIRDERGAARILVKP 473
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
T L I ++A G SFAI +G Y WG + YQ G G DDI
Sbjct: 474 TKHEKLSG--IVAVAAGTDNSFAISKDGKAYSWGFSSNYQTGQGTIDDI 520
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 176/396 (44%), Gaps = 42/396 (10%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSF------RDSHGSMGLKGEGIQKTPLKLESV-SGI- 174
VQI+ G H+VAL D + WG RD+ GL+ + +GI
Sbjct: 170 VQIACGGMHAVALTRDNKILTWGVNDQGALGRDTTWEGGLRDADKADDSDSEDEDDTGIN 229
Query: 175 ----VKIASGADHFVMLTSRGNLLTAGCPEQG--QLGRITQRSASRNARRGMSFLEPGEV 228
IA D+F T ++ + + GR+ R++ + F E V
Sbjct: 230 PKESTPIALSEDNFAPGTKFVQVVASDSASFALTEDGRVYGWGTFRSSDGILGFTENVRV 289
Query: 229 PLKR------KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
+ K+I + +G + + KG+++A+G +QLG E K +
Sbjct: 290 QTRPALIAGLKNIKALASGANHILALDHKGNVVAWGCGQQNQLGRRIIERNKMSS---LV 346
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEP---VTEPTP 337
P + L K +A G +HS A++ +G ++ +G +++G +G++ N E + +P
Sbjct: 347 PQGV-GLPRGKIAKIACGSYHSFAIDKDGAVWGWGLNNFGEIGVESNAGEDDAVILKPVK 405
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILNSEGKIYAFGR 396
I L D T+TSI G S A +G L+ WG +GYQ+G E+ D ++ E I R
Sbjct: 406 ISFLADHTVTSIEGGIHHSLACTDKGDLFTWGRVDGYQVGFELEEIDKVDEEYVI----R 461
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ G + + +PT L I ++A G SFAI +G Y WG + YQ G
Sbjct: 462 DERG------AARILVKPTKHEKLSG--IVAVAAGTDNSFAISKDGKAYSWGFSSNYQTG 513
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G DDI P I+ + ++ +GGQ+SV++
Sbjct: 514 QGTIDDIHVPTLIDNTATRDKKIIGAGAGGQYSVLI 549
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 119/318 (37%), Gaps = 66/318 (20%)
Query: 209 QRSASRNARRGMSF--LEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
++S + A R + ++ P K I+D T V + ++ +G+ GL + G+
Sbjct: 89 KKSKTEKAPRAAAVPKVKKSAYPEIGKKINDAPTQVLDIYVFGEGTSGELGLGSKRVGGK 148
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKF--TMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+V++ P L ++LS K +A G H++AL + KI +G +D G LG
Sbjct: 149 KPIDVKR--------PRLNENLSAKTVGVVQIACGGMHAVALTRDNKILTWGVNDQGALG 200
Query: 325 LKNVSE----------------------PVTEPTPIPSLQDK-----TITSIACGNCVSF 357
E E TPI +D + + SF
Sbjct: 201 RDTTWEGGLRDADKADDSDSEDEDDTGINPKESTPIALSEDNFAPGTKFVQVVASDSASF 260
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
A+ +G +YGWG F R G LG T P I
Sbjct: 261 ALTEDGRVYGWGT-----------------------F-RSSDGILGFTENVRVQTRPALI 296
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNN 476
L K I ++A G A+D +G + WG G QLG E + + + +G L
Sbjct: 297 AGL--KNIKALASGANHILALDHKGNVVAWGCGQQNQLGRRIIERNKMSSLVPQGVGLPR 354
Query: 477 YTVLQVASGGQHSVILAK 494
+ ++A G HS + K
Sbjct: 355 GKIAKIACGSYHSFAIDK 372
>gi|261188107|ref|XP_002620470.1| ran exchange factor Prp20/Pim1 [Ajellomyces dermatitidis SLH14081]
gi|239593345|gb|EEQ75926.1| ran exchange factor Prp20/Pim1 [Ajellomyces dermatitidis SLH14081]
Length = 543
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 195/400 (48%), Gaps = 67/400 (16%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV++ GGMH V LT D K+ T
Sbjct: 119 VYVCGEGSSGELGLGAGKNVVDVKRPRLNPHLPADTVGVVQIATGGMHCVALTHDNKILT 178
Query: 93 WGCNDEGALGREAEGD--------------------------SEFIPQTV---NLPKKA- 122
WG ND+GALGR+ D E P V + P+
Sbjct: 179 WGVNDQGALGRDTTWDGGYKDIKEGDGSDSDSDSDSDSGLNPREATPGAVPSESFPEDTV 238
Query: 123 -VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASG 180
VQ++A DS S AL + G+VY WG+FR + G +G G+ +Q+TP+ L ++ I I G
Sbjct: 239 FVQVAASDSASFALTDVGSVYGWGTFRSNDGILGFDGKSTVQRTPVLLPTLKKIKYITCG 298
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
++H + L +G++ G +Q QLG RI +R+ ++ L+P E L K++ +
Sbjct: 299 SNHVLALNDKGSVFAWGSGQQNQLGRRIIERTK-------INGLQPREFGLP-KNMVGLG 350
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G ++F I G + A+GLN++ + G + + P +++SL+DK +
Sbjct: 351 CGADHSFAIHKSGKVYAWGLNSFGETGIREGAGDR--EAAILRPAVVESLTDKDIIQICG 408
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDK 344
G HHSLAL ++G+ AFGR D + G+K S P + PTPIP D
Sbjct: 409 GSHHSLALTAKGECLAFGRLDGFQTGIKIDSLPDSSVIRDDRNKPRILANPTPIP---DI 465
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I G+ S AI +G + WG YQ G G ++DI
Sbjct: 466 DACHIGSGSEHSIAIGKDGRAWSWGFSANYQTGQGTDEDI 505
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 164/404 (40%), Gaps = 111/404 (27%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT---------------------QRS 211
G+V+IA+G H V LT +LT G +QG LGR T
Sbjct: 156 GVVQIATGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGYKDIKEGDGSDSDSDSDSD 215
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYSQL 264
+ N R PG VP + D VF V + ++ GS+ +G +N L
Sbjct: 216 SGLNPREAT----PGAVPSESFPEDTVFVQVAASDSASFALTDVGSVYGWGTFRSNDGIL 271
Query: 265 G-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G + S VQ+ TP L+ +L KK + G +H LALN +G ++A+G +L
Sbjct: 272 GFDGKSTVQR-------TPVLLPTL--KKIKYITCGSNHVLALNDKGSVFAWGSGQQNQL 322
Query: 324 GLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----G 373
G + + E T I LQ K + + CG SFAI G +Y WG+ + G
Sbjct: 323 GRR-----IIERTKINGLQPREFGLPKNMVGLGCGADHSFAIHKSGKVYAWGLNSFGETG 377
Query: 374 YQLGNGKED---------------DI------------LNSEGKIYAFGRHDYGRLGLKN 406
+ G G + DI L ++G+ AFGR D + G+K
Sbjct: 378 IREGAGDREAAILRPAVVESLTDKDIIQICGGSHHSLALTAKGECLAFGRLDGFQTGIKI 437
Query: 407 VSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
S P + PTPIP D I G+ S AI +G + WG
Sbjct: 438 DSLPDSSVIRDDRNKPRILANPTPIP---DIDACHIGSGSEHSIAIGKDGRAWSWGFSAN 494
Query: 453 YQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++DI +E + GK+LN +GGQ S+
Sbjct: 495 YQTGQGTDEDIEVASVVENTAVRGKRLN-----WADAGGQFSIF 533
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 89/233 (38%), Gaps = 63/233 (27%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVT------------- 333
+A+G H +AL + KI +G +D G LG K++ E
Sbjct: 159 QIATGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGYKDIKEGDGSDSDSDSDSDSGL 218
Query: 334 ---EPTP--IPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
E TP +PS +D +A + SFA+ G +YGWG
Sbjct: 219 NPREATPGAVPSESFPEDTVFVQVAASDSASFALTDVGSVYGWGTF-------------- 264
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
R + G LG S P +P+L K I I CG+ A++ +G ++
Sbjct: 265 ----------RSNDGILGFDGKSTVQRTPVLLPTL--KKIKYITCGSNHVLALNDKGSVF 312
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVILAK 494
WG G QLG I+E KI G Q + ++ + G HS + K
Sbjct: 313 AWGSGQQNQLGR----RIIERTKINGLQPREFGLPKNMVGLGCGADHSFAIHK 361
>gi|322702426|gb|EFY94076.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium anisopliae
ARSEF 23]
Length = 539
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 196/408 (48%), Gaps = 77/408 (18%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-----------NVVEVVVGGMHTVCLTE 86
V + G G+ G+LGLGP ++T ALV + ++V++ GGMHT+ LT
Sbjct: 108 AVFSFGSGECGELGLGP----KRTAALVPKFNPALDPNEASKYHIVQLACGGMHTIALTA 163
Query: 87 DGKVYTWGCNDEGALGR-----------EAEGDS----------EFIPQTV---NLPKKA 122
D K+ TWG NDEGALGR +AE DS E P V N PK
Sbjct: 164 DNKILTWGVNDEGALGRDTTWEGGLKDMDAESDSGDEDGELNPHECTPTEVPSKNFPKGT 223
Query: 123 V--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL------KGEGIQKTPLKLESVSGI 174
V Q++AGDS S L + G+VY WGSFRD+ G K IQ P+ + + +
Sbjct: 224 VFTQVAAGDSCSFVLTQTGSVYGWGSFRDNKGDRRFTKTQNDKVVEIQNDPILIPELENV 283
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
++IA GA+H + L G + G EQ QLGR R L P +V + +
Sbjct: 284 IQIACGANHALALDKSGQVWGWGSYEQNQLGR------QPFGRYQQETLLPRQVRVCTRP 337
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKK 292
I + +G Y++F + K ++ A+GLN++ GEA + G+ P I+ L K
Sbjct: 338 IKYIASGEYHSFAVDRKDNVWAWGLNSF---GEAGYAKEAGGDEAILPYPMKIRDLCGKG 394
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----------------NVSEPVTEP 335
+A G HHS A+ +GK+Y +GR D G+LG+ N P
Sbjct: 395 VVSMAGGTHHSGAVTEDGKVYMWGRLDGGQLGIDFSQSQLDDEHLVRRDEYNKPRICLRP 454
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
T +P + + + +ACG + I++EGV Y G G+ QLG G EDD
Sbjct: 455 TVVPEMGN--VVDVACGTDHTIFINNEGVGYATGFGSVGQLGLGNEDD 500
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 163/392 (41%), Gaps = 80/392 (20%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------QRSASRNARRGMS 221
IV++A G H + LT+ +LT G ++G LGR T S +
Sbjct: 148 IVQLACGGMHTIALTADNKILTWGVNDEGALGRDTTWEGGLKDMDAESDSGDEDGELNPH 207
Query: 222 FLEPGEVPLKRKHIDDVFTGVY-----NTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P EVP K VFT V + ++ GS+ +G + + D K+ N
Sbjct: 208 ECTPTEVPSKNFPKGTVFTQVAAGDSCSFVLTQTGSVYGWG---SFRDNKGDRRFTKTQN 264
Query: 277 TCFFT----PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P LI L + +A G +H+LAL+ G+++ +G ++ +LG +
Sbjct: 265 DKVVEIQNDPILIPELEN--VIQIACGANHALALDKSGQVWGWGSYEQNQLGRQPFGRYQ 322
Query: 333 TEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL 385
E T +P + + I IA G SFA+D + ++ WG+ + GY G ++ IL
Sbjct: 323 QE-TLLPRQVRVCTRPIKYIASGEYHSFAVDRKDNVWAWGLNSFGEAGYAKEAGGDEAIL 381
Query: 386 ---------------------------NSEGKIYAFGRHDYGRLGLK------------- 405
+GK+Y +GR D G+LG+
Sbjct: 382 PYPMKIRDLCGKGVVSMAGGTHHSGAVTEDGKVYMWGRLDGGQLGIDFSQSQLDDEHLVR 441
Query: 406 ----NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
N PT +P + + + +ACG + I++EGV Y G G+ QLG G ED
Sbjct: 442 RDEYNKPRICLRPTVVPEMGN--VVDVACGTDHTIFINNEGVGYATGFGSVGQLGLGNED 499
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
D +I GK + ++ A+GGQ SV+ +
Sbjct: 500 DSNTAQRIRGKDIKGRKLVGAAAGGQFSVVTS 531
>gi|255935947|ref|XP_002559000.1| Pc13g05660 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583620|emb|CAP91635.1| Pc13g05660 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 575
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 208/436 (47%), Gaps = 79/436 (18%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVME- 58
+K+ Q P K V P K V CG+G +G+LGLG DV
Sbjct: 129 IKRSRVAQPRQPKPKAKVVINEAPKAKLN-----VFVCGEGSSGELGLGTAKNVIDVKRP 183
Query: 59 RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD---------- 108
R L + VV+V VGGMH + LT D K+++WG ND+GALGRE E +
Sbjct: 184 RLNKLLSAEEVGVVQVAVGGMHCLALTHDNKIFSWGVNDQGALGRETEWEGGYKDIENDS 243
Query: 109 -------------SEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFR 148
E IP + P A V+++A DS S AL +DG VY WG+FR
Sbjct: 244 DSDSDDEDSGLNPRESIPTAI--PATAFPEGTVFVEVAAADSASFALTDDGLVYGWGTFR 301
Query: 149 DSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ G +G +Q+TP + S+ I + GA+H + L +G + + G +Q QLGR
Sbjct: 302 SNDGILGFDASSHVQRTPTLIPSLKKITHLTCGANHVLALNDQGRVYSWGSGQQNQLGR- 360
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS---- 262
R RN G L+P E L K+I + +G Y++F + + G++ A+GLN++
Sbjct: 361 --RIVERNRLNG---LQPREFGLP-KNIVHIGSGSYHSFAVHTTGNVYAWGLNSFGATAL 414
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ G D E P L++SLSD+K + + G HHS+A+ +G+ +GR D +
Sbjct: 415 REGAGDDEA------AIVHPTLVESLSDRKISQICGGSHHSVAIAGDGECLVWGRLDGFQ 468
Query: 323 LGLK--------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
GLK + + PTP+P + K +A + S A+D++G + W
Sbjct: 469 SGLKIDTLSDDAVIKDERDRPRILIAPTPVPGINAKV---VAAASDHSLAVDADGRAWSW 525
Query: 369 GMGNGYQLGNGKEDDI 384
G YQ G G +DDI
Sbjct: 526 GFSATYQTGQGTQDDI 541
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 29/210 (13%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYG----RLGLKNVSEPVTEPTPIPSLQDKTI 346
K + SG +HS A+++ G +YA+G + +G R G + + PT + SL D+ I
Sbjct: 380 KNIVHIGSGSYHSFAVHTTGNVYAWGLNSFGATALREGAGDDEAAIVHPTLVESLSDRKI 439
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ I G+ S AI +G WG +G+Q +G + D L+ + I D R+
Sbjct: 440 SQICGGSHHSVAIAGDGECLVWGRLDGFQ--SGLKIDTLSDDAVIK--DERDRPRI---- 491
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--- 463
+ PTP+P + K + A + S A+D++G + WG YQ G G +DDI
Sbjct: 492 ----LIAPTPVPGINAKVV---AAASDHSLAVDADGRAWSWGFSATYQTGQGTQDDIEVA 544
Query: 464 --LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
++ GK+LN +GGQ SV
Sbjct: 545 TVIDNTATRGKKLN-----WAGAGGQFSVF 569
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 60/221 (27%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLK-------------------------NVSEPVTEPT 336
H LAL + KI+++G +D G LG + N E +
Sbjct: 205 HCLALTHDNKIFSWGVNDQGALGRETEWEGGYKDIENDSDSDSDDEDSGLNPRESIPTAI 264
Query: 337 PIPSLQDKTI-TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG 395
P + + T+ +A + SFA+ +G++YGWG F
Sbjct: 265 PATAFPEGTVFVEVAAADSASFALTDDGLVYGWGT-----------------------F- 300
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
R + G LG S PT IPSL K IT + CG A++ +G +Y WG G QL
Sbjct: 301 RSNDGILGFDASSHVQRTPTLIPSL--KKITHLTCGANHVLALNDQGRVYSWGSGQQNQL 358
Query: 456 GNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVIL 492
G I+E ++ G Q + ++ + SG HS +
Sbjct: 359 GR----RIVERNRLNGLQPREFGLPKNIVHIGSGSYHSFAV 395
>gi|295671875|ref|XP_002796484.1| RCC1 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283464|gb|EEH39030.1| RCC1 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 568
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 195/400 (48%), Gaps = 68/400 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV++ GGMH V LT D K+ T
Sbjct: 145 VYVCGEGSSGELGLGAAKNVVDVKRPRLNPHLRADTVGVVQIAAGGMHCVALTHDNKILT 204
Query: 93 WGCNDEGALGREAEGD-------------------------SEFIPQTV---NLPKKA-- 122
WG ND+GALGR+ D E P V + PK
Sbjct: 205 WGVNDQGALGRDTTWDGGMKDIKDDANDSDSDSDSGSGLNPRECTPTAVPSEHFPKDTVF 264
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGA 181
VQ+SA DS S AL + GTVY WG+FR + G +G +Q+TP + +++ I I GA
Sbjct: 265 VQVSASDSASFALTDVGTVYGWGTFRGNDGILGFDSNTKVQRTPTLITTLTKIKAIICGA 324
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L +G++ + G +Q QLGR R RN G L+P E L K++ + G
Sbjct: 325 NHVLALNDKGSVYSWGSGQQNQLGR---RIIERNKLNG---LQPREFGLP-KNMVGLGCG 377
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNT--CFFTPHLIKSLSDKKFTMLAS 298
Y++F I G + A+GLN++ + G VQ +G++ P +++SL K +
Sbjct: 378 SYHSFAIHKSGKVYAWGLNSFGETG----IVQGAGDSDAAVLHPAVVESLLGKDVVQVCG 433
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDK 344
G HHSLAL ++G+ AFGR D + GLK S P + PT IP +
Sbjct: 434 GSHHSLALTAKGECLAFGRLDGFQTGLKIDSLPEESIIRDDRNKPRILVTPTVIPGVD-- 491
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+A G+ S AI +G + WG YQ G G ++DI
Sbjct: 492 -ACHVATGSDHSIAIGKDGHAWSWGFSANYQTGQGTDEDI 530
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 172/406 (42%), Gaps = 103/406 (25%)
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT--------------QRS 211
L+ ++V G+V+IA+G H V LT +LT G +QG LGR T
Sbjct: 176 LRADTV-GVVQIAAGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGMKDIKDDANDSD 234
Query: 212 ASRNARRGMSFLE--PGEVPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYS 262
+ ++ G++ E P VP + D VF V + ++ G++ +G N
Sbjct: 235 SDSDSGSGLNPRECTPTAVPSEHFPKDTVFVQVSASDSASFALTDVGTVYGWGTFRGNDG 294
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG +++++VQ+ TP LI +L+ K + G +H LALN +G +Y++G
Sbjct: 295 ILGFDSNTKVQR-------TPTLITTLT--KIKAIICGANHVLALNDKGSVYSWGSGQQN 345
Query: 322 RLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN--- 372
+LG + + E + LQ K + + CG+ SFAI G +Y WG+ +
Sbjct: 346 QLGRR-----IIERNKLNGLQPREFGLPKNMVGLGCGSYHSFAIHKSGKVYAWGLNSFGE 400
Query: 373 -GYQLGNGKED---------------DI------------LNSEGKIYAFGRHDYGRLGL 404
G G G D D+ L ++G+ AFGR D + GL
Sbjct: 401 TGIVQGAGDSDAAVLHPAVVESLLGKDVVQVCGGSHHSLALTAKGECLAFGRLDGFQTGL 460
Query: 405 KNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
K S P + PT IP + +A G+ S AI +G + WG
Sbjct: 461 KIDSLPEESIIRDDRNKPRILVTPTVIPGVD---ACHVATGSDHSIAIGKDGHAWSWGFS 517
Query: 451 NGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++D I+E I GK+LN GGQ S+
Sbjct: 518 ANYQTGQGTDEDIEVASIVENTAIRGKKLN-----WADGGGQFSIF 558
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 62/231 (26%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVTE------------- 334
+A+G H +AL + KI +G +D G LG +K++ + +
Sbjct: 186 IAAGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGMKDIKDDANDSDSDSDSGSGLNP 245
Query: 335 ----PTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
PT +PS +D ++ + SFA+ G +YGWG G
Sbjct: 246 RECTPTAVPSEHFPKDTVFVQVSASDSASFALTDVGTVYGWGTFRG-------------- 291
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+ G LG + ++ PT I +L I +I CG A++ +G +Y W
Sbjct: 292 ----------NDGILGFDSNTKVQRTPTLITTLTK--IKAIICGANHVLALNDKGSVYSW 339
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVILAK 494
G G QLG I+E K+ G Q + ++ + G HS + K
Sbjct: 340 GSGQQNQLGR----RIIERNKLNGLQPREFGLPKNMVGLGCGSYHSFAIHK 386
>gi|294654461|ref|XP_456522.2| DEHA2A04620p [Debaryomyces hansenii CBS767]
gi|199428901|emb|CAG84477.2| DEHA2A04620p [Debaryomyces hansenii CBS767]
Length = 498
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 197/403 (48%), Gaps = 65/403 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDLDN--VVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ F E L + +V+ GGMHT+ L D +
Sbjct: 53 VFVWGTGSMCELGLGPSAKTKEVKRPRLNPFLTSEHLGDSKIVDFAAGGMHTLALDSDNR 112
Query: 90 VYTWGCNDEGALGREAE----------------------GDSEFIPQTV-NLPK----KA 122
V++WG ND G LGR+ ++E P V NLPK K
Sbjct: 113 VWSWGGNDSGVLGRDTSKVKEVLKDMDADDSEDDDDGDLNEAESTPGLVENLPKLKGAKI 172
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASG 180
VQ++A D+ S L ++G VYAWG FR + G +G + I QKTPLK++ + +V++A G
Sbjct: 173 VQLAATDNLSAVLYDNGDVYAWGCFRCNEGLLGFLRDEIKLQKTPLKIKQLKNVVQLARG 232
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
DH + L S+G + G +Q QLGR R R+ G LEP + L +I + +
Sbjct: 233 KDHLLALDSKGIVYAWGNGQQFQLGR---RVLERHRYNG---LEPKQFGLY--NIKYIAS 284
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G ++ F I + A+GLN + Q DS+ + + +P +I LS K T L +G
Sbjct: 285 GDFHCFAIDHDDQVYAWGLNQFGQCALTDSDGKLEDGSLITSPTIIPELSKKGITHLCAG 344
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-----------PTP------IPSLQ 342
+HHS+AL +G + ++GR+D +G+ P + PTP + S
Sbjct: 345 EHHSMALTGDGSVLSWGRYDMKEVGIPKDKLPESTFKDAHGNARSVPTPTKLQFGLKSDN 404
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDI 384
+IACG+ SFA+ +G +Y WG G+ Y G G E+D+
Sbjct: 405 GVKCKTIACGSHHSFAVTDDGFVYAWGFGDTYAPGLGPLEEDV 447
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 71/289 (24%)
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
+PL + DVF V+ T GS+ GL ++ EV++ F T +
Sbjct: 43 IPLAKTQPLDVF--VWGT-----GSMCELGLGPSAKT----KEVKRPRLNPFLTS---EH 88
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--LKNVSEPV------------- 332
L D K A+G H+LAL+S+ +++++G +D G LG V E +
Sbjct: 89 LGDSKIVDFAAGGMHTLALDSDNRVWSWGGNDSGVLGRDTSKVKEVLKDMDADDSEDDDD 148
Query: 333 -----TEPTP-----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
E TP +P L+ I +A + +S + G +Y WG
Sbjct: 149 GDLNEAESTPGLVENLPKLKGAKIVQLAATDNLSAVLYDNGDVYAWGCF----------- 197
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
R + G LG E + TP+ Q K + +A G A+DS+G
Sbjct: 198 -------------RCNEGLLGFLR-DEIKLQKTPLKIKQLKNVVQLARGKDHLLALDSKG 243
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQH 488
++Y WG G +QLG +LE + +E KQ Y + +ASG H
Sbjct: 244 IVYAWGNGQQFQLGR----RVLERHRYNGLEPKQFGLYNIKYIASGDFH 288
>gi|380490700|emb|CCF35832.1| hypothetical protein CH063_07530 [Colletotrichum higginsianum]
Length = 521
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 181/383 (47%), Gaps = 57/383 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVME--RKTFA---LVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G G+ +LGLGP + E R A L + VV+V GGMH V LT DG+V TW
Sbjct: 46 VAVWGSGENCELGLGPRITEAPRPRLAHKHLSPETVGVVQVAAGGMHCVALTRDGRVLTW 105
Query: 94 GCNDEGALGREAEGDS------------EFIPQTVNLPKKA--VQISAGDSHSVALLEDG 139
G ND+GALGR+ D+ E P V+ + VQ++A +S AL +G
Sbjct: 106 GVNDDGALGRKKSPDTPEEGPEDLLGPFESTPGQVDFQEDVDIVQVAATNSACFALTAEG 165
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKT----PLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
TVY WGSF G+ G E KT P+++ + I ++A GA+H + LT+ GN+L
Sbjct: 166 TVYGWGSFAGGDGNFGFLHEKPPKTTERLPVRVPGLENIAQLAGGANHALALTNDGNVLA 225
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSIL 254
G EQ +LGR RR L P + L + +F G +++F I + G +
Sbjct: 226 WGSGEQNELGRRILE------RRRFDTLLPQRIGLPKNKTAKIFAGSHHSFAIDTAGKVW 279
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
AFGLNN+ Q G E +G T +P ++KSL++ +A G HHS+A GKI
Sbjct: 280 AFGLNNFGQCGIPTRE--DTGFTTVISPTMVKSLAEYDIRHIAGGLHHSIACTKSGKILV 337
Query: 315 FGRHDYGRLGLK--------------------NVSEPVTEPTPIPSLQDKTITSIACGNC 354
+GR D G++G+ NV V+ P P Q + NC
Sbjct: 338 WGRCDDGQMGIDLDRVPRDHIIFDYRGRPRVLNVPTEVSIPDHSPDSQ-AVFVAAGIDNC 396
Query: 355 VSFAIDSEGVLYGWGMGNGYQLG 377
F I E LY WG Y G
Sbjct: 397 --FVIAKE--LYAWGFSACYNTG 415
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 163/442 (36%), Gaps = 99/442 (22%)
Query: 90 VYTWGCNDEGALG---------REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGT 140
V WG + LG R P+TV + VQ++AG H VAL DG
Sbjct: 46 VAVWGSGENCELGLGPRITEAPRPRLAHKHLSPETVGV----VQVAAGGMHCVALTRDGR 101
Query: 141 VYAWGSFRDSHGSMGLKG------EGIQKTPLKLESVSG---------IVKIASGADHFV 185
V WG D G++G K EG + ES G IV++A+
Sbjct: 102 VLTWGVNDD--GALGRKKSPDTPEEGPEDLLGPFESTPGQVDFQEDVDIVQVAATNSACF 159
Query: 186 MLTSRGNLLTAGCPE--QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
LT+ G + G G G + ++ R P VP ++I + G
Sbjct: 160 ALTAEGTVYGWGSFAGGDGNFGFLHEKPPKTTERL------PVRVP-GLENIAQLAGGAN 212
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +++ G++LA+G ++LG E ++ P I L K + +G HH
Sbjct: 213 HALALTNDGNVLAWGSGEQNELGRRILERRRFDT---LLPQRI-GLPKNKTAKIFAGSHH 268
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEP----VTEPTPIPSLQDKTITSIACGNCVSFA 358
S A+++ GK++AFG +++G+ G+ + V PT + SL + I IA G S A
Sbjct: 269 SFAIDTAGKVWAFGLNNFGQCGIPTREDTGFTTVISPTMVKSLAEYDIRHIAGGLHHSIA 328
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK------------- 405
GKI +GR D G++G+
Sbjct: 329 C--------------------------TKSGKILVWGRCDDGQMGIDLDRVPRDHIIFDY 362
Query: 406 -------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
NV V+ P P Q + NC F I E LY WG Y G
Sbjct: 363 RGRPRVLNVPTEVSIPDHSPDSQ-AVFVAAGIDNC--FVIAKE--LYAWGFSACYNTGLK 417
Query: 459 KEDDILEPMKIEGKQLNNYTVL 480
+ + P + + + L
Sbjct: 418 TTETVGSPTVVPCRLTATFEAL 439
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 53/249 (21%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE------------PTPIPSLQD 343
+A+G H +AL +G++ +G +D G LG K + E P + +D
Sbjct: 86 VAAGGMHCVALTRDGRVLTWGVNDDGALGRKKSPDTPEEGPEDLLGPFESTPGQVDFQED 145
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWG-----------------------------MGNGY 374
I +A N FA+ +EG +YGWG + N
Sbjct: 146 VDIVQVAATNSACFALTAEGTVYGWGSFAGGDGNFGFLHEKPPKTTERLPVRVPGLENIA 205
Query: 375 QLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS---LQDKTITSIAC 430
QL G + L ++G + A+G + LG + + E T +P L I
Sbjct: 206 QLAGGANHALALTNDGNVLAWGSGEQNELG-RRILERRRFDTLLPQRIGLPKNKTAKIFA 264
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASG 485
G+ SFAID+ G ++ +G+ N Q G +D ++ P + K L Y + +A G
Sbjct: 265 GSHHSFAIDTAGKVWAFGLNNFGQCGIPTREDTGFTTVISPTMV--KSLAEYDIRHIAGG 322
Query: 486 GQHSVILAK 494
HS+ K
Sbjct: 323 LHHSIACTK 331
>gi|448119392|ref|XP_004203719.1| Piso0_000737 [Millerozyma farinosa CBS 7064]
gi|359384587|emb|CCE78122.1| Piso0_000737 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 204/423 (48%), Gaps = 63/423 (14%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHT 81
K KT + G G +LGLGP ++ F E L +V+ V GGMHT
Sbjct: 45 KTKTQQLDIFVWGTGSMCELGLGPSAKTKEVKRPRLNPFLTEEHLGGSKIVDFVAGGMHT 104
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFI---------------------PQTV-NLP 119
+ L ++++WG ND G LGR+ E + P V NLP
Sbjct: 105 LALDSKNRLWSWGGNDSGVLGRDTSKAKEVLKDMDSEDEDDEDADLNEQESTPGLVENLP 164
Query: 120 K----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSG 173
K K VQ++A D+ S L ++G VYAWG FR + G +G + I QK+P K++ +
Sbjct: 165 KNSGAKIVQLAATDNLSAVLYDNGDVYAWGCFRCNEGLLGFLRDEIKLQKSPKKIDQLKN 224
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IV++ G DH + L ++G + G +Q QLGR R R+ R LEP + L
Sbjct: 225 IVQLCGGKDHILALDTKGIVYAWGNGQQFQLGR---RILERHRFRA---LEPQQFGLY-- 276
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+I + +G ++ F I + + A+GLN + Q +S+ + + P LI+ LS+K
Sbjct: 277 NIKYIASGDFHCFAIDHEDQVYAWGLNQFGQCALTNSQGELEDGSLITKPTLIEELSNKS 336
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-------------VTEPTPIP 339
+++G+HHS+AL + G+++++GR+D LG+ P V PT I
Sbjct: 337 IVQISTGEHHSMALTASGEVFSWGRYDMKELGISEEDLPDYAFKDAHGKVRSVPRPTEIR 396
Query: 340 SLQDKTITS--IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY--AFG 395
+ + S IACG+ SFA+ +G +Y WG G+ Y G G DD + +I A
Sbjct: 397 LEANSPVKSKAIACGSHHSFAVTEDGFVYAWGFGDTYAPGLGPLDDDVEKPTRIVNTATK 456
Query: 396 RHD 398
HD
Sbjct: 457 HHD 459
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 124/287 (43%), Gaps = 56/287 (19%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS---EVQKSG------------NT 277
K +D V G++ + SK + ++G N+ LG S EV K N
Sbjct: 93 KIVDFVAGGMHTLALDSKNRLWSWGGNDSGVLGRDTSKAKEVLKDMDSEDEDDEDADLNE 152
Query: 278 CFFTPHLIKSL---SDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPV 332
TP L+++L S K LA+ + S L G +YA+G R + G LG E
Sbjct: 153 QESTPGLVENLPKNSGAKIVQLAATDNLSAVLYDNGDVYAWGCFRCNEGLLGFLR-DEIK 211
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
+ +P Q K I + G A+D++G++Y WG G +QLG IL +
Sbjct: 212 LQKSPKKIDQLKNIVQLCGGKDHILALDTKGIVYAWGNGQQFQLGR----RILER----H 263
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
F + + GL N I IA G+ FAID E +Y WG+
Sbjct: 264 RFRALEPQQFGLYN------------------IKYIASGDFHCFAIDHEDQVYAWGLNQF 305
Query: 453 YQLG----NGKEDD---ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
Q G+ +D I +P IE +L+N +++Q+++G HS+ L
Sbjct: 306 GQCALTNSQGELEDGSLITKPTLIE--ELSNKSIVQISTGEHHSMAL 350
>gi|358059165|dbj|GAA95104.1| hypothetical protein E5Q_01759 [Mixia osmundae IAM 14324]
Length = 613
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 230/520 (44%), Gaps = 99/520 (19%)
Query: 38 VVLTCGQGDTGQLGLGP-----DVMERKTFALVEDL--------DNVVEVVVGGMHTVCL 84
L CG GD+GQLGLG V + AL E L + ++ VGG HT+
Sbjct: 126 AALVCGAGDSGQLGLGTADNATQVWRPRLHALFEKLATEGKLGPSGLADIAVGGFHTIAT 185
Query: 85 TEDGKVYTWGCNDEGALGR-------------------------EAEGDSEFIPQTV--- 116
+GKV++WG ND ALGR +A ++EF+P V
Sbjct: 186 DSEGKVWSWGANDNAALGRITAVYRDRLPDEQTEEGESGPRVDQDATAENEFVPMVVTGL 245
Query: 117 -NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EG---IQKTPLKLESV 171
+ KAV ++AGDS S+A+ + G + AWGSFR GS G G EG Q +P+ +
Sbjct: 246 SDAGFKAVSVAAGDSISLAVSDQGELKAWGSFRAEDGSTGFDGVEGHPTRQFSPVTIAMP 305
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S V +A+G +H V L G + + G +Q QLGR ARR + L + L
Sbjct: 306 SPCVSVAAGDNHVVALLQDGTVASWGVGQQAQLGRKIM------ARRTTNGLRAEGIGL- 358
Query: 232 RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE--VQKS-GNTCFFTPHLIKS 287
K+I V G +++F + G + +GLN + QLG +D + ++ S G L +
Sbjct: 359 -KNIIAVGAGSFHSFALDESGKVYGWGLNTFQQLGLSDKDGGLEDSIGKPTVIEALLPDN 417
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
L+ K ++ G+HHSL L +G+++A GR D G+ GL + E +
Sbjct: 418 LNGAKVVAMSGGEHHSLFLLDDGRVFACGRCDDGQCGLSDAHEAMI-------------- 463
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK-- 405
N ID++ G +E+ I + E A + L +
Sbjct: 464 -----NANQRQIDAKAAQEA--------AGQKEEERIASLEASGSALTEVEKFNLTMTAK 510
Query: 406 -NVSEP---VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
VS P V PT I ++ IA G + A+ G LYG+G+ QLG G+ D
Sbjct: 511 MTVSVPNKCVPYPTAITFPGEERFVQIAAGARQALAVADSGALYGFGLNGEGQLGLGEPD 570
Query: 462 D--------ILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
D P KI K L VL+ ASG QHS +LA
Sbjct: 571 DEPGAPQERYATPTKISNKALTTRKVLRAASGTQHSALLA 610
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 222/465 (47%), Gaps = 66/465 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
GV G D GQLG +ER T A V L +VV + G H++ L DG +WG N
Sbjct: 656 GVAWAWGGNDQGQLG-DATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNN 714
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQ--ISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG +G S P V +P + ++AG SHS+A+ DGTV+AWG+ + G +
Sbjct: 715 AYGQLG---DGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGN--NGSGEL 769
Query: 155 GLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
G G G+Q+ P++++ + V +++G +H + + S G + G QGQLG T
Sbjct: 770 G-DGTGLQRPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGT----- 823
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADS 269
G++ VP++ ++ V ++ + S G++ A+G N Y QLG+A S
Sbjct: 824 -----GITRY----VPVRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATS 874
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
T P + L+ +A+G HHSLA+ S+G ++A+G + YG+LG
Sbjct: 875 -------TQRLVPIQVPGLT--GVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLG-DGTK 924
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
+ P +P L + S+A G S A+ S G ++ WG N QLG+G
Sbjct: 925 IQRSPPVQVPGL--AGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVP 982
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
++ ++G ++ +G ++ +LG + S+ P PS +
Sbjct: 983 ISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSD---RKMPTPSSVPNGVR 1039
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
SI+ G S A+ S+G ++ WG GN QLG+G L P + G
Sbjct: 1040 SISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVSG 1084
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 235/486 (48%), Gaps = 65/486 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + +R V+ LD+VV + VG H++ L DG V+ WG N
Sbjct: 56 GTVWAWGDNTYGQLGDGTGITQRLPV-RVQSLDSVVALAVGYQHSLALRSDGTVWAWGDN 114
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG ++ S+ Q +L V I+AGD HS+ALL DG+V+AWG ++HG +G
Sbjct: 115 FFGQLGDGSDAQSQVPIQVWSL-NGVVAIAAGDHHSLALLSDGSVWAWG--YNAHGQLGD 171
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P++++ +SG+V +++G+ H + + S G + G GQLG S
Sbjct: 172 DTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLG-----DGSSTE 226
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS----SKGSILAFGLNNYSQLGEADSEVQ 272
R P+ + V + V TF S S G++ A+G N QLG
Sbjct: 227 R---------WTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGENGSGQLG------- 270
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
S T P ++ L++ + LA+G HSLAL S+G + A+G +D+G++G +S+ +
Sbjct: 271 ISSTTRRPVPVVVPGLTNVQ--ALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQL 328
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
T P +P + + SIA G S A+ ++G+ + WG + QLG+G+
Sbjct: 329 T-PVQVPGV--GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLG 385
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
L+++G ++A+G + G+LG P T P +P L + ++
Sbjct: 386 QRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLG-DGTDLPRTLPVQVPGL--AGVHTL 442
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
+ S A ++G ++ WG QLG+G L P+++ G V V+S QH
Sbjct: 443 SATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLA----GVDTVSSMHQH 498
Query: 489 SVILAK 494
S+ +++
Sbjct: 499 SLAVSR 504
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 210/425 (49%), Gaps = 68/425 (16%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
+V G H++ L DG V+ WG N G LG + G ++ +P V V ++ G HS
Sbjct: 41 QVAAGAAHSLMLRSDGTVWAWGDNTYGQLG-DGTGITQRLPVRVQSLDSVVALAVGYQHS 99
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
+AL DGTV+AWG + G +G + + P+++ S++G+V IA+G H + L S G+
Sbjct: 100 LALRSDGTVWAWGD--NFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHHSLALLSDGS 157
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFIS 248
+ G GQLG T ++ +P++ + + V ++ +
Sbjct: 158 VWAWGYNAHGQLGDDTTVAS--------------PLPVQVQGLSGVVALSAGSTHSLAVL 203
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G + A+G N Y QLG+ S T +TP L+ SL+ K + +G HSLAL S
Sbjct: 204 SDGKVKAWGDNYYGQLGDGSS-------TERWTPVLVSSLTGVKSVV--AGTFHSLALCS 254
Query: 309 EGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G + A+G + G+LG+ + + PV P +P L + + ++A G+ S A+ S+G
Sbjct: 255 DGTVRAWGENGSGQLGISSTTRRPV--PVVVPGLTN--VQALAAGSAHSLALRSDG---- 306
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+ A+G +D+G++G +S+ +T P +P + + S
Sbjct: 307 ----------------------TVRAWGNNDHGQVGNGTISQQLT-PVQVPGV--GRMKS 341
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IA G S A+ ++G+ + WG + QLG+G+ L P ++ G+++ + + +G +
Sbjct: 342 IAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIR----MPLGTGNR 397
Query: 488 HSVIL 492
HS+ L
Sbjct: 398 HSLAL 402
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 223/486 (45%), Gaps = 69/486 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +G+LG G + R T V L ++V V G H++ L DG V+ WG N
Sbjct: 506 GTVWAWGFNGSGRLGDG-TTLSRLTPVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDN 564
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
GALG +G + V +P V ++AG+ +S+A+ G+V+AWG + M
Sbjct: 565 SNGALG---DGTTLRRLSPVQVPGLSGVVALAAGNGYSLAVDAQGSVWAWG-----YNGM 616
Query: 155 GLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
G G+G + TP + ++SG+V +A+G H + L + G G +QGQLG T
Sbjct: 617 GQLGDGTTTPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLE 676
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE 270
S P VP H+ + G ++ + + G+ ++G N Y QLG+ S
Sbjct: 677 RS----------TPAAVP-GLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTST 725
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ P ++ +A+G HSLA+ S+G ++A+G + G LG
Sbjct: 726 LH---------PVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELG---DGT 773
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----------- 379
+ P P+ + +++ G S A+ S+G ++ WG + QLG+G
Sbjct: 774 GLQRPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRV 833
Query: 380 -------------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
L S+G ++A+G + YG+LG ++ + P +P L +
Sbjct: 834 SGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLV-PIQVPGLTG--VV 890
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
SIA G S A+ S+G ++ WG QLG+G + P+++ G ++ VA+G
Sbjct: 891 SIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPGLA----GMVSVAAGT 946
Query: 487 QHSVIL 492
HS+ +
Sbjct: 947 YHSLAV 952
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 227/526 (43%), Gaps = 99/526 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ER T LV L V VV G H++ L DG V WG N
Sbjct: 206 GKVKAWGDNYYGQLGDGSST-ERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGEN 264
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + +P V ++AG +HS+AL DGTV AWG+ + HG +G
Sbjct: 265 GSGQLGISST-TRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGN--NDHGQVGN 321
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
Q TP+++ V + IA+G H + + + G G QGQLG + +Q+
Sbjct: 322 GTISQQLTPVQVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQ---- 377
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE-------- 266
L P V +R + ++ + + G++ A+G+N QLG+
Sbjct: 378 --------LRPARVLGQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTL 429
Query: 267 ------------------------ADSEVQKSGNTCF-----------FTPHLIKSLSDK 291
AD V G+ F P + L+
Sbjct: 430 PVQVPGLAGVHTLSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLA-- 487
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++S HSLA++ +G ++A+G + GRLG +T P +P L ++ ++A
Sbjct: 488 GVDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLT-PVQVPGL--SSMVAVAA 544
Query: 352 GNCVSFAIDSEGVLYGWG------MGNGYQL-------------------GNGKEDDILN 386
G+ S A+ ++G ++ WG +G+G L GNG + +
Sbjct: 545 GSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSGVVALAAGNGYSLAV-D 603
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
++G ++A+G + G+LG + P PT P+L + ++A G+ S A+ ++GV +
Sbjct: 604 AQGSVWAWGYNGMGQLG-DGTTTPRVTPTQAPALSG--VVALAAGDSHSLALRADGVAWA 660
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG + QLG+ + P + G V+ +A+G HS++L
Sbjct: 661 WGGNDQGQLGDATTLERSTPAAVPGLA----HVVALAAGNAHSLVL 702
>gi|115388879|ref|XP_001211945.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196029|gb|EAU37729.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 528
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 201/422 (47%), Gaps = 74/422 (17%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLD 69
P KV + + PT + V CG+G +G+LGLG DV R L D
Sbjct: 94 PKPKVVINT--APTTRLN-----VYVCGEGSSGELGLGAEKNAVDVKRPRLNPHLPADRV 146
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD--------------------- 108
VV+V VGGMH V LT D K+ TWG ND+GALGR+ D
Sbjct: 147 GVVQVAVGGMHCVALTHDNKILTWGVNDQGALGRDTNWDGGYKDIDDNKSDSDSDDDDPA 206
Query: 109 ---SEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
E P + P +A VQ++AGDS S AL +DG VY WG+FR + G +G
Sbjct: 207 LNPRESTPTAI--PSEAFPENTVFVQVAAGDSSSFALTDDGLVYGWGTFRSNDGILGFDA 264
Query: 159 -EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+Q TP+ + S+ I + G +H + L +G + + G +Q QLGR R RN
Sbjct: 265 THKVQSTPILIPSLKKIKYLTCGDNHVLALNDKGAVFSWGSGQQNQLGR---RIIERNRL 321
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
G L+P E L K+I + +G +++F + G + A+GLN++ + G S
Sbjct: 322 NG---LQPREFGLP-KNIAHIGSGAFHSFAVHQSGKVYAWGLNSFGETG--ISSNAGDDE 375
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP----- 331
P ++ SLS K+ T + G HHSLA +GK +GR D + GLK S P
Sbjct: 376 AAILHPVVVDSLSGKEITQICGGAHHSLAATKDGKCLVWGRLDGYQTGLKIDSLPDNAVI 435
Query: 332 ---------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ EPT +P ++ T +A G+ S AID+EG + WG YQ G G D
Sbjct: 436 KDERGRPRILIEPTAVPGIK---ATHVAAGSDHSLAIDAEGRPWSWGFSATYQTGQGTSD 492
Query: 383 DI 384
DI
Sbjct: 493 DI 494
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 46/260 (17%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQ 300
++ KG++ ++G +QLG E + + L ++F + + SG
Sbjct: 294 LNDKGAVFSWGSGQQNQLGRRIIERNR-----------LNGLQPREFGLPKNIAHIGSGA 342
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVS 356
HS A++ GK+YA+G + +G G+ + + + P + SL K IT I G S
Sbjct: 343 FHSFAVHQSGKVYAWGLNSFGETGISSNAGDDEAAILHPVVVDSLSGKEITQICGGAHHS 402
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
A +G WG +GYQ G K D + ++ A + + GR + + EPT
Sbjct: 403 LAATKDGKCLVWGRLDGYQTGL-KIDSLPDN-----AVIKDERGRPRI------LIEPTA 450
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIEG 471
+P ++ T +A G+ S AID+EG + WG YQ G G DD I+E + G
Sbjct: 451 VPGIK---ATHVAAGSDHSLAIDAEGRPWSWGFSATYQTGQGTSDDIEVATIVENTAVRG 507
Query: 472 KQLNNYTVLQVASGGQHSVI 491
K+LN +GGQ SV
Sbjct: 508 KKLN-----WAGAGGQFSVF 522
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 61/222 (27%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKN------------------------VSEPVTEPTP 337
H +AL + KI +G +D G LG ++ + PT
Sbjct: 157 HCVALTHDNKILTWGVNDQGALGRDTNWDGGYKDIDDNKSDSDSDDDDPALNPRESTPTA 216
Query: 338 IPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
IPS ++ +A G+ SFA+ +G++YGWG
Sbjct: 217 IPSEAFPENTVFVQVAAGDSSSFALTDDGLVYGWGTF----------------------- 253
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
R + G LG + + P IPSL K I + CG+ A++ +G ++ WG G Q
Sbjct: 254 -RSNDGILGFDATHKVQSTPILIPSL--KKIKYLTCGDNHVLALNDKGAVFSWGSGQQNQ 310
Query: 455 LGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVIL 492
LG I+E ++ G Q + + + SG HS +
Sbjct: 311 LGR----RIIERNRLNGLQPREFGLPKNIAHIGSGAFHSFAV 348
>gi|430813410|emb|CCJ29231.1| unnamed protein product [Pneumocystis jirovecii]
Length = 506
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 198/398 (49%), Gaps = 61/398 (15%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTF--ALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G G +LGLGP+ V++R L D +V+V VGGMHT + +G VYT
Sbjct: 95 VYVFGTGSMSELGLGPEPTGRVVKRPRLNPLLPYDTIGIVDVAVGGMHTAAIDYEGNVYT 154
Query: 93 WGCNDEGALGREAEGD----------------SEFIPQTVN-LPK--KAVQISAGDSHSV 133
WG ND+GALGR+ D + +P V +P K V+++ GDS SV
Sbjct: 155 WGVNDQGALGRDTTWDVNRADLDSDDEQMLNPKDSVPGKVEGMPDGVKVVKMACGDSISV 214
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
A+ + G VYAWGSFR S G +G + I + P+ L+ ++ IV + G DH + LT+ G+
Sbjct: 215 AITDKGQVYAWGSFRCSDGILGFSPQIKIARQPVHLKELNNIVSVVCGTDHVLALTAYGS 274
Query: 193 LLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSK 250
+ + G +Q QLG R+ +R+ ++ L P E LK+ I + G Y++F IS
Sbjct: 275 VFSWGNGQQFQLGHRVVERTR-------LNALVPREFGLKK--IKAIGAGSYHSFAISHD 325
Query: 251 GSILAFGLNNYSQLGEADSEVQKSG---NTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
G + ++GLN + Q G ++ SG +P ++SL + G+HHS AL
Sbjct: 326 GRVFSWGLNQFGQCG-----IESSGGEDGAVVSSPTHVQSLDPYNIVCITGGEHHSAALT 380
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEP-------------VTEPTPIPSLQDKTITSIACGNC 354
EG++ +GR D +LG+ P V PT +P + I+ I CG
Sbjct: 381 QEGELLVWGRLDANQLGIPRTYLPQYTIYDASNRPRFVPIPTKVPGI--PIISQIYCGTH 438
Query: 355 VSFAI-DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+ AI +G ++ WG G YQ+G G + + KI
Sbjct: 439 HNLAITKDDGSVWSWGFGESYQVGQGPSGNDVEVPTKI 476
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 171/406 (42%), Gaps = 70/406 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-----------LKGEGIQ------KTP 165
V ++ G H+ A+ +G VY WG + G++G L + Q P
Sbjct: 134 VDVAVGGMHTAAIDYEGNVYTWGV--NDQGALGRDTTWDVNRADLDSDDEQMLNPKDSVP 191
Query: 166 LKLESVSG---IVKIASGADHFVMLTSRGNLLTAG---CPEQGQLGRITQRSASRNARRG 219
K+E + +VK+A G V +T +G + G C + G LG Q +R
Sbjct: 192 GKVEGMPDGVKVVKMACGDSISVAITDKGQVYAWGSFRCSD-GILGFSPQIKIARQ---- 246
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNT----FISSKGSILAFGLNNYSQLGEADSEVQKSG 275
P+ K ++++ + V T +++ GS+ ++G QLG E +
Sbjct: 247 ---------PVHLKELNNIVSVVCGTDHVLALTAYGSVFSWGNGQQFQLGHRVVERTR-- 295
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS----EP 331
+ + KK + +G +HS A++ +G+++++G + +G+ G+++
Sbjct: 296 ----LNALVPREFGLKKIKAIGAGSYHSFAISHDGRVFSWGLNQFGQCGIESSGGEDGAV 351
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
V+ PT + SL I I G S A+ EG L WG + QLG I
Sbjct: 352 VSSPTHVQSLDPYNIVCITGGEHHSAALTQEGELLVWGRLDANQLG-------------I 398
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI-DSEGVLYGWGMG 450
Y N V PT +P + I+ I CG + AI +G ++ WG G
Sbjct: 399 PRTYLPQYTIYDASNRPRFVPIPTKVPGI--PIISQIYCGTHHNLAITKDDGSVWSWGFG 456
Query: 451 NGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
YQ+G G +D+ P KI+ + ++ +GGQ SV+L P
Sbjct: 457 ESYQVGQGPSGNDVEVPTKIDNTAIRGKVIVAGGAGGQFSVLLGIP 502
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 51/225 (22%)
Query: 253 ILAFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ FG + S+LG E V K P+ + D +A G H+ A++ E
Sbjct: 95 VYVFGTGSMSELGLGPEPTGRVVKRPRLNPLLPYDTIGIVD-----VAVGGMHTAAIDYE 149
Query: 310 GKIYAFGRHDYGRLG-----------LKNVSEPVTEPT-----PIPSLQDKT-ITSIACG 352
G +Y +G +D G LG L + E + P + + D + +ACG
Sbjct: 150 GNVYTWGVNDQGALGRDTTWDVNRADLDSDDEQMLNPKDSVPGKVEGMPDGVKVVKMACG 209
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+ +S AI +G +Y WG +F R G LG +
Sbjct: 210 DSISVAITDKGQVYAWG-----------------------SF-RCSDGILGFSPQIKIAR 245
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+P + L + I S+ CG A+ + G ++ WG G +QLG+
Sbjct: 246 QPVHLKELNN--IVSVVCGTDHVLALTAYGSVFSWGNGQQFQLGH 288
>gi|320588268|gb|EFX00743.1| ran exchange factor prp20 [Grosmannia clavigera kw1407]
Length = 652
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 175/347 (50%), Gaps = 51/347 (14%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-------------EAEGDS------- 109
+VV++ GGMH V LT+D ++ TWG ND+GALGR E E D+
Sbjct: 293 DVVQIAAGGMHAVALTKDNRILTWGVNDQGALGRKTNWEGGLRDADAEEESDNEDDTGLN 352
Query: 110 --EFIPQTVNLP-----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGI 161
E P ++ K VQ+ A DS + AL EDG +Y WG+FR S G +G K I
Sbjct: 353 PLESTPTEIDTDGLINGTKFVQVVASDSATFALTEDGRIYGWGTFRASDGVLGFSKDVSI 412
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
Q+TP L + +A+G++H + L ++G L T GCPEQ QLGR R R+ + S
Sbjct: 413 QRTPTLLPEPRKVKALATGSNHILALDTKGKLYTWGCPEQNQLGR---RCVQRDIKE--S 467
Query: 222 FLEPGEVPLKRK-HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNT-- 277
L PG V +R I+ + G Y++F + G + A+GLNN+ QL + Q +G+T
Sbjct: 468 ALRPGGVGFRRGVQIEKIACGSYHSFAVDDGGRVYAWGLNNFGQL----NVEQGAGDTDA 523
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
L++ L+ K + G+HHSLA ++GK+ +GR D ++G + P
Sbjct: 524 TVLDATLVEGLAAFKIVDVDGGEHHSLACTADGKLLTWGRIDGHQVGFDAGAFNKIPP-- 581
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ + G SFA+ +G +Y WG YQ G G +DI
Sbjct: 582 --------VVHVNAGTDNSFALTEDGKVYSWGFSGTYQTGQGTTEDI 620
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 158/377 (41%), Gaps = 75/377 (19%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRSASRNARRGMSF 222
+V+IA+G H V LT +LT G +QG LGR T + + G++
Sbjct: 294 VVQIAAGGMHAVALTKDNRILTWGVNDQGALGRKTNWEGGLRDADAEEESDNEDDTGLNP 353
Query: 223 LE--PGEVPLK-----RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG-EADSEVQ 272
LE P E+ K + V + ++ G I +G S LG D +Q
Sbjct: 354 LESTPTEIDTDGLINGTKFVQVVASDSATFALTEDGRIYGWGTFRASDGVLGFSKDVSIQ 413
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----NV 328
+ TP L+ +K LA+G +H LAL+++GK+Y +G + +LG + ++
Sbjct: 414 R-------TPTLLPE--PRKVKALATGSNHILALDTKGKLYTWGCPEQNQLGRRCVQRDI 464
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL----GNGKEDDI 384
E P + + I IACG+ SFA+D G +Y WG+ N QL G G D
Sbjct: 465 KESALRPGGVGFRRGVQIEKIACGSYHSFAVDDGGRVYAWGLNNFGQLNVEQGAGDTDAT 524
Query: 385 L---------------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
+ ++GK+ +GR D ++G + P
Sbjct: 525 VLDATLVEGLAAFKIVDVDGGEHHSLACTADGKLLTWGRIDGHQVGFDAGAFNKIPP--- 581
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
+ + G SFA+ +G +Y WG YQ G G +DI P I+ +
Sbjct: 582 -------VVHVNAGTDNSFALTEDGKVYSWGFSGTYQTGQGTTEDIETPTLIDNTAVREK 634
Query: 478 TVLQVASGGQHSVILAK 494
++ ++GGQ S++ ++
Sbjct: 635 KIVHASAGGQFSLLASE 651
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
+L C T G +LT G+ D Q+G + + VV V G ++ LTEDG
Sbjct: 549 SLAC-TADGKLLTWGRIDGHQVGFDAGAFNK--------IPPVVHVNAGTDNSFALTEDG 599
Query: 89 KVYTWGCNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVALLE 137
KVY+WG + G+ D E I T KK V SAG S+ E
Sbjct: 600 KVYSWGFSGTYQTGQGTTEDIETPTLIDNTAVREKKIVHASAGGQFSLLASE 651
>gi|346321525|gb|EGX91124.1| Ran exchange factor Prp20/Pim1, putative [Cordyceps militaris CM01]
Length = 544
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 193/403 (47%), Gaps = 70/403 (17%)
Query: 39 VLTCGQGDTGQLGLGPDV------MERKTFALVEDLD----NVVEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG ++ K L + LD V+++ GGMH V LT D
Sbjct: 110 VYVFGEGSSGELGLGSKKVNGKKPIDVKRPRLNDKLDAKSVGVIQIACGGMHAVALTRDN 169
Query: 89 KVYTWGCNDEGALGRE---------------------------------AEGDSEFIPQT 115
K+ TWG ND+GALGR+ A G+ F P T
Sbjct: 170 KILTWGVNDQGALGRDTNWDGGLKDIDGNDSDSDDDTDTGINPVESTPTAVGEEFFAPGT 229
Query: 116 VNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGI 174
K VQ A DS + L +DG VY WG+FR S G +G + IQ+ P+ L ++ I
Sbjct: 230 -----KFVQAVASDSATFVLTQDGRVYGWGTFRSSDGVLGFTEAIKIQQRPMLLPTLKNI 284
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+A+G++H + L ++GN++ GC +Q QLGR R RN MS L P + L R
Sbjct: 285 TALAAGSNHILALDTKGNVVAWGCGQQNQLGR---RIIERNK---MSSLTPQGMGLPRGK 338
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I + G Y++F I G + +GLNN+ ++G + + + P + L D
Sbjct: 339 IAKIACGAYHSFAIDKDGKVWGWGLNNFGEIGVQSNAGED--DAVILKPAKLADLEDHVI 396
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPSL----QDKT 345
T + G HHSLA + +GK++ +GR D ++G + N + + + P + D T
Sbjct: 397 TDIDGGVHHSLACSEDGKLFTWGRVDGFQVGFEFDELNKDDVIFDERGAPRILVKPTDNT 456
Query: 346 ----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I ++ G+ +FAI +G Y WG + YQ G G +DI
Sbjct: 457 EVSGICAVTAGSDNNFAISEDGKAYSWGFSSNYQTGQGTIEDI 499
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 67/293 (22%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
K ++++ + + ++ +GS GL + G+ +V++ P L L K
Sbjct: 98 KAVNEIPHEILDVYVFGEGSSGELGLGSKKVNGKKPIDVKR--------PRLNDKLDAKS 149
Query: 293 F--TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN----------------------V 328
+A G H++AL + KI +G +D G LG
Sbjct: 150 VGVIQIACGGMHAVALTRDNKILTWGVNDQGALGRDTNWDGGLKDIDGNDSDSDDDTDTG 209
Query: 329 SEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
PV E TP ++ K + ++A + +F + +G +YGWG
Sbjct: 210 INPV-ESTPTAVGEEFFAPGTKFVQAVAS-DSATFVLTQDGRVYGWGTF----------- 256
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
R G LG + P +P+L K IT++A G+ A+D++G
Sbjct: 257 -------------RSSDGVLGFTEAIKIQQRPMLLPTL--KNITALAAGSNHILALDTKG 301
Query: 443 VLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ WG G QLG E + + + +G L + ++A G HS + K
Sbjct: 302 NVVAWGCGQQNQLGRRIIERNKMSSLTPQGMGLPRGKIAKIACGAYHSFAIDK 354
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 31/192 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL----VEDL-DNVVEVVVGGMH-TVCLTEDGKV 90
G V G + G++G+ + E L + DL D+V+ + GG+H ++ +EDGK+
Sbjct: 356 GKVWGWGLNNFGEIGVQSNAGEDDAVILKPAKLADLEDHVITDIDGGVHHSLACSEDGKL 415
Query: 91 YTWGCNDEGALGREAEG--------DSEFIPQTVNLPKKAVQIS------AGDSHSVALL 136
+TWG D +G E + D P+ + P ++S AG ++ A+
Sbjct: 416 FTWGRVDGFQVGFEFDELNKDDVIFDERGAPRILVKPTDNTEVSGICAVTAGSDNNFAIS 475
Query: 137 EDGTVYAWG---SFRDSHGSMGLKGEGIQKTPLKLE--SVSGIVKIASGA-DHFVMLTSR 190
EDG Y+WG +++ G++ E I KTP +++ ++ G I +GA F +L +
Sbjct: 476 EDGKAYSWGFSSNYQTGQGTI----EDI-KTPTEIDNTAIRGKQIIGAGAGGQFSVLFGK 530
Query: 191 GNLLTAGCPEQG 202
T G G
Sbjct: 531 AEGQTNGAKTNG 542
>gi|322702585|gb|EFY94221.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium anisopliae
ARSEF 23]
Length = 524
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 176/366 (48%), Gaps = 62/366 (16%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF------------------ 111
+VV+V GGMHTV LT D K+ TWG NDE ALGR+ + D +
Sbjct: 134 DVVQVACGGMHTVALTSDNKIITWGVNDENALGRDTQWDGKLRDMDAASEDDEDDEDMNP 193
Query: 112 -------IPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL----KGE 159
IP P + VQ++AGDS S AL + G VY WG+FRDS G G +GE
Sbjct: 194 LESTPMQIPSNYFPPHIRFVQVAAGDSCSFALTDTGQVYGWGTFRDSRGDKGFRYNERGE 253
Query: 160 GI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+ Q+ P++++++ I +I G DH + L RGN+ GC EQ Q GR R
Sbjct: 254 LVENQERPIRIQNLQNITQICCGVDHALALDIRGNIWAWGCNEQYQFGR-------RLIG 306
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
R + L P +V + R + +G Y+ F + ++ +G NN+ + G +V+ +G+
Sbjct: 307 RASNSLIPNQVRVCRNKAKYIASGSYHCFAVDKDDNVWGWGANNFGEAG----DVETAGD 362
Query: 277 T-CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL---------- 325
F TP + L KK +L G HHS A+ + G+ + +GR G+LG+
Sbjct: 363 EGAFITPTKLVGLCQKKVLVLDGGAHHSAAVTANGECFVWGRMMEGQLGIDFTPEQLQDS 422
Query: 326 -------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+N PT +P++ + +T +ACG + ID G Y G G QLG
Sbjct: 423 TLVRCDERNKPRICLRPTIVPTMAHQQVTHVACGLDHTILIDKPGNAYSTGYGFQGQLGL 482
Query: 379 GKEDDI 384
DD+
Sbjct: 483 NSSDDV 488
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 160/402 (39%), Gaps = 71/402 (17%)
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ------- 209
K E ++ T S +V++A G H V LTS ++T G ++ LGR TQ
Sbjct: 118 KNEALRPTRNPHLSAFDVVQVACGGMHTVALTSDNKIITWGVNDENALGRDTQWDGKLRD 177
Query: 210 ---RSASRNARRGMSFLE--PGEVPLKR--KHID--DVFTGVYNTF-ISSKGSILAFGLN 259
S M+ LE P ++P HI V G +F ++ G + +G
Sbjct: 178 MDAASEDDEDDEDMNPLESTPMQIPSNYFPPHIRFVQVAAGDSCSFALTDTGQVYGWGTF 237
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--- 316
S+ G+ + G I+ + + T + G H+LAL+ G I+A+G
Sbjct: 238 RDSR-GDKGFRYNERGELVENQERPIRIQNLQNITQICCGVDHALALDIRGNIWAWGCNE 296
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ +GR + S + P + ++K IA G+ FA+D + ++GWG N +
Sbjct: 297 QYQFGRRLIGRASNSLI-PNQVRVCRNKA-KYIASGSYHCFAVDKDDNVWGWGANNFGEA 354
Query: 377 GN------------------------------GKEDDILNSEGKIYAFGRHDYGRLGL-- 404
G+ + + G+ + +GR G+LG+
Sbjct: 355 GDVETAGDEGAFITPTKLVGLCQKKVLVLDGGAHHSAAVTANGECFVWGRMMEGQLGIDF 414
Query: 405 ---------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
+N PT +P++ + +T +ACG + ID G Y G
Sbjct: 415 TPEQLQDSTLVRCDERNKPRICLRPTIVPTMAHQQVTHVACGLDHTILIDKPGNAYSTGY 474
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
G QLG DD+ +I K++ ++ +GG+ S++
Sbjct: 475 GFQGQLGLNSSDDVKVFQRITDKRIKG-ELIWAGAGGRFSIM 515
>gi|302832638|ref|XP_002947883.1| hypothetical protein VOLCADRAFT_57885 [Volvox carteri f.
nagariensis]
gi|300266685|gb|EFJ50871.1| hypothetical protein VOLCADRAFT_57885 [Volvox carteri f.
nagariensis]
Length = 410
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 192/393 (48%), Gaps = 52/393 (13%)
Query: 48 GQLGLG-------PDV---MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
G LGLG PD + R + E+L V+V GGMHTV LT DG VYTWG ND
Sbjct: 8 GALGLGDPEDADDPDTRSQIPRPKLPVSEEL-KFVQVACGGMHTVGLTVDGDVYTWGVND 66
Query: 98 EGALGR------------EAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYA 143
EGALGR + +GDS F+P LP +AVQ++AGD + A+ DG +Y
Sbjct: 67 EGALGRKTSGTCWEKESDDVKGDS-FVPGQAQLPNGMQAVQVAAGDGFTFAVGADGCLYG 125
Query: 144 WGSFRDSHGSMG-----LKGEGIQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLLTAG 197
G F+D G++ +K +G+ K ES+ I K+ GA H V+LT+RG++LT G
Sbjct: 126 CGFFKDEVGALSGFTPKVKMQGLFALIWKPESLRDRIKKLECGARHAVLLTNRGDVLTWG 185
Query: 198 CPEQGQLGRIT-QRSASRNARRGMSFLEPGEV-----PLKRKHIDDVFTGVYNTFISSK- 250
QGQLGR+ S +P V L DV G Y+TF+ K
Sbjct: 186 SGSQGQLGRVKPYHQDSEYQPTAAELFQPTLVAHLPYALGNTTAVDVACGAYSTFVIGKN 245
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + A+GLNN QLG A Q + + P + SLS +A G+ HSLAL +G
Sbjct: 246 GDVAAWGLNNSGQLGIAK---QSDDDNIKWEPESVDSLS--GVVHIAGGEQHSLALTKKG 300
Query: 311 KIYAFGRHDYGRLGLKNVSEPVT-----EPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ +FG YG LG ++V EP + L + +IA G VS ++G
Sbjct: 301 ALLSFGAATYGMLGRRDVDTTTANDIHPEPKQVDGLDGIKVEAIAAGTNVSACTTTDGDA 360
Query: 366 YGWGMGNGYQLGNGKEDD---ILNSEGKIYAFG 395
+ WG QL G +DD + G++ AFG
Sbjct: 361 WFWGSNTNLQLAKGTDDDDEPVPKKMGRVKAFG 393
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 155/389 (39%), Gaps = 62/389 (15%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA---SRNAR 217
I + L + V++A G H V LT G++ T G ++G LGR T + +
Sbjct: 27 IPRPKLPVSEELKFVQVACGGMHTVGLTVDGDVYTWGVNDEGALGRKTSGTCWEKESDDV 86
Query: 218 RGMSFLEPGEVPLKR-KHIDDVFTGVYNTF-ISSKGSILAFGL--NNYSQLGEADSEVQK 273
+G SF+ PG+ L V G TF + + G + G + L +V+
Sbjct: 87 KGDSFV-PGQAQLPNGMQAVQVAAGDGFTFAVGADGCLYGCGFFKDEVGALSGFTPKVKM 145
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------- 324
G F +SL D+ L G H++ L + G + +G G+LG
Sbjct: 146 QG--LFALIWKPESLRDR-IKKLECGARHAVLLTNRGDVLTWGSGSQGQLGRVKPYHQDS 202
Query: 325 -LKNVSEPVTEPTPIP----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ + + +PT + +L + T +ACG +F I G + WG+ N QLG
Sbjct: 203 EYQPTAAELFQPTLVAHLPYALGNTTAVDVACGAYSTFVIGKNGDVAAWGLNNSGQLGIA 262
Query: 380 KEDD----------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
K+ D L +G + +FG YG LG ++V
Sbjct: 263 KQSDDDNIKWEPESVDSLSGVVHIAGGEQHSLALTKKGALLSFGAATYGMLGRRDVDTTT 322
Query: 412 T-----EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
EP + L + +IA G VS ++G + WG QL G +DD EP
Sbjct: 323 ANDIHPEPKQVDGLDGIKVEAIAAGTNVSACTTTDGDAWFWGSNTNLQLAKGTDDDD-EP 381
Query: 467 MKIEGKQLNNYTVLQVAS---GGQHSVIL 492
+ + ++ + ++ + GGQH +L
Sbjct: 382 VPKKMGRVKAFGYRRIHTLCFGGQHGALL 410
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 60/298 (20%)
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYA 314
FG N++ LG D E +T P +S++ KF +A G H++ L +G +Y
Sbjct: 2 FGTNSFGALGLGDPEDADDPDTRSQIPRPKLPVSEELKFVQVACGGMHTVGLTVDGDVYT 61
Query: 315 FGRHDYGRLGLKNV-------SEPVTEPTPIPSLQD----KTITSIACGNCVSFAIDSEG 363
+G +D G LG K S+ V + +P +A G+ +FA+ ++G
Sbjct: 62 WGVNDEGALGRKTSGTCWEKESDDVKGDSFVPGQAQLPNGMQAVQVAAGDGFTFAVGADG 121
Query: 364 VLYGWG-----------------MGNGYQL---------------GNGKEDDILNSEGKI 391
LYG G M + L + +L + G +
Sbjct: 122 CLYGCGFFKDEVGALSGFTPKVKMQGLFALIWKPESLRDRIKKLECGARHAVLLTNRGDV 181
Query: 392 YAFGRHDYGRLG----------LKNVSEPVTEPTPIP----SLQDKTITSIACGNCVSFA 437
+G G+LG + + + +PT + +L + T +ACG +F
Sbjct: 182 LTWGSGSQGQLGRVKPYHQDSEYQPTAAELFQPTLVAHLPYALGNTTAVDVACGAYSTFV 241
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT-VLQVASGGQHSVILAK 494
I G + WG+ N QLG K+ D + +K E + +++ + V+ +A G QHS+ L K
Sbjct: 242 IGKNGDVAAWGLNNSGQLGIAKQSDD-DNIKWEPESVDSLSGVVHIAGGEQHSLALTK 298
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 34 TGGGVVLTCGQGDTGQLG----------LGPDVMERKTFALVEDL------DNVVEVVVG 77
T G VLT G G GQLG P E LV L V+V G
Sbjct: 176 TNRGDVLTWGSGSQGQLGRVKPYHQDSEYQPTAAELFQPTLVAHLPYALGNTTAVDVACG 235
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI---PQTVNLPKKAVQISAGDSHSVA 134
T + ++G V WG N+ G LG + D + I P++V+ V I+ G+ HS+A
Sbjct: 236 AYSTFVIGKNGDVAAWGLNNSGQLGIAKQSDDDNIKWEPESVDSLSGVVHIAGGEQHSLA 295
Query: 135 LLEDGTVYAWGSFRDSHGSMGLK------GEGIQKTPLKLESVSGIV--KIASGADHFVM 186
L + G + ++G+ ++G +G + I P +++ + GI IA+G +
Sbjct: 296 LTKKGALLSFGAA--TYGMLGRRDVDTTTANDIHPEPKQVDGLDGIKVEAIAAGTNVSAC 353
Query: 187 LTSRGNLLTAGCPEQGQLGRIT 208
T+ G+ G QL + T
Sbjct: 354 TTTDGDAWFWGSNTNLQLAKGT 375
>gi|425777731|gb|EKV15887.1| Ran exchange factor Prp20/Pim1, putative [Penicillium digitatum
PHI26]
gi|425782713|gb|EKV20609.1| Ran exchange factor Prp20/Pim1, putative [Penicillium digitatum
Pd1]
Length = 545
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 210/436 (48%), Gaps = 79/436 (18%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTF 62
+K+ Q P K V P K V CG+G +G+LGLG +V++ K
Sbjct: 99 IKRSRVAQPRQPKPKAKVVINEAPKTKLN-----VFVCGEGSSGELGLGTAKNVIDVKRP 153
Query: 63 ALVEDLD----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD---------- 108
L + L VV+V VGGMH + LT D K+++WG ND+GALGRE E D
Sbjct: 154 RLNKLLSAEEVGVVQVAVGGMHCLALTYDNKIFSWGVNDQGALGRETEWDGGYKDIENDS 213
Query: 109 -------------SEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFR 148
E IP + P A V+++A DS S AL +DG VY WG+FR
Sbjct: 214 DSESDDEDSGLNPRESIPTAI--PATAFPEGTVFVEVAAADSASFALTDDGLVYGWGTFR 271
Query: 149 DSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ G +G +Q TP + S+ I + GA+H + L +G + + G +Q QLGR
Sbjct: 272 SNDGILGFDASSRVQTTPTLISSLKKITHLTCGANHVLALNDQGRVFSWGSGQQNQLGR- 330
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS---- 262
R RN G L+P E L K+I + +G Y++F + + G++ ++GLN++
Sbjct: 331 --RIVERNRLNG---LQPREFGLP-KNIVHIGSGSYHSFAVHTTGNVYSWGLNSFGATAL 384
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ G D E P L++SLS++ + + G HHS+A+ +G+ +GR D +
Sbjct: 385 REGAGDDEA------AIVHPTLVESLSNRDISQICGGAHHSVAIAGDGECLVWGRLDGFQ 438
Query: 323 LGLK--------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
GLK + + PTP+P ++ K +A + S AID+EG + W
Sbjct: 439 SGLKIDTLSDDAVIKDERDRPRILIAPTPVPDIKAKV---VAAASDHSLAIDAEGRAWSW 495
Query: 369 GMGNGYQLGNGKEDDI 384
G YQ G G +DDI
Sbjct: 496 GFSATYQTGQGTQDDI 511
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 29/210 (13%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYG----RLGLKNVSEPVTEPTPIPSLQDKTI 346
K + SG +HS A+++ G +Y++G + +G R G + + PT + SL ++ I
Sbjct: 350 KNIVHIGSGSYHSFAVHTTGNVYSWGLNSFGATALREGAGDDEAAIVHPTLVESLSNRDI 409
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ I G S AI +G WG +G+Q +G + D L+ + I D R+
Sbjct: 410 SQICGGAHHSVAIAGDGECLVWGRLDGFQ--SGLKIDTLSDDAVIK--DERDRPRI---- 461
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--- 463
+ PTP+P ++ K + A + S AID+EG + WG YQ G G +DDI
Sbjct: 462 ----LIAPTPVPDIKAKVV---AAASDHSLAIDAEGRAWSWGFSATYQTGQGTQDDIEVA 514
Query: 464 --LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
++ GK+LN +GGQ SV
Sbjct: 515 TVIDNTATRGKKLN-----WAGAGGQFSVF 539
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
F +A+ S AL +G +Y +G R + G LG S T PT I SL K IT +
Sbjct: 245 FVEVAAADSASFALTDDGLVYGWGTFRSNDGILGFDASSRVQTTPTLISSL--KKITHLT 302
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG A++ +G ++ WG G QLG + ++ ++G
Sbjct: 303 CGANHVLALNDQGRVFSWGSGQQNQLGRR-----IVERNRLNGLQPREFG---------- 347
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN--GYQLGNGKEDD---ILE 465
+P K I I G+ SFA+ + G +Y WG+ + L G DD I+
Sbjct: 348 ------LP----KNIVHIGSGSYHSFAVHTTGNVYSWGLNSFGATALREGAGDDEAAIVH 397
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P +E L+N + Q+ G HSV +A
Sbjct: 398 PTLVE--SLSNRDISQICGGAHHSVAIA 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 60/221 (27%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLK-------------------------NVSEPVTEPT 336
H LAL + KI+++G +D G LG + N E +
Sbjct: 175 HCLALTYDNKIFSWGVNDQGALGRETEWDGGYKDIENDSDSESDDEDSGLNPRESIPTAI 234
Query: 337 PIPSLQDKTI-TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG 395
P + + T+ +A + SFA+ +G++YGWG
Sbjct: 235 PATAFPEGTVFVEVAAADSASFALTDDGLVYGWGTF------------------------ 270
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
R + G LG S T PT I SL K IT + CG A++ +G ++ WG G QL
Sbjct: 271 RSNDGILGFDASSRVQTTPTLISSL--KKITHLTCGANHVLALNDQGRVFSWGSGQQNQL 328
Query: 456 GNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVIL 492
G I+E ++ G Q + ++ + SG HS +
Sbjct: 329 GR----RIVERNRLNGLQPREFGLPKNIVHIGSGSYHSFAV 365
>gi|145344573|ref|XP_001416804.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577030|gb|ABO95097.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 547
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 190/407 (46%), Gaps = 51/407 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERK------TFALVEDLDNVVEVVVGGMHTVCLTED 87
+ G GQGD+ QLGLG DV ER+ T A+ E + GG HT+ LT D
Sbjct: 105 SASGEAYVWGQGDSAQLGLGGDVDERRRPTRVTTGAMGEA--RATRIAAGGTHTLALTSD 162
Query: 88 GKVYTWGCNDEGALGR----EAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTV 141
G Y+WG ND GALGR +A+ D+E+ P V LP K V +S GDSH AL E G V
Sbjct: 163 GACYSWGNNDNGALGRVVNKDADPDAEYAPGKVELPLDVKVVMVSTGDSHGCALTESGEV 222
Query: 142 YAWGSFRDSHGSMGLKGEGI--QKT--PLKL----ESVSGIVKIASGADHFVMLTSRGNL 193
+AWG FR ++G+ + QKT P K+ S I SG DH + L+ G +
Sbjct: 223 WAWGQFRTTNGAWAFNPNTLDAQKTSFPFKIYAPASSKERAKAIVSGVDHVLALSREGGV 282
Query: 194 LTAGCPEQGQLGRITQRSASRNARRG----MSFLEPGEVPLKRK------------HIDD 237
+ GC E+G+LGR+ A N + L P V L + +
Sbjct: 283 YSWGCSEKGRLGRVDASEAEDNEQASDDVKRRLLTPSRVALPKSGGGIGSAFGGEPEVTA 342
Query: 238 VFTGVYNTFI------SSKGSILAFGLNNYSQLGEADSEVQKSGN-TCFFTPHLIKSLSD 290
+ G +++F SK + +GL+N+ Q+G D G+ + P + SL
Sbjct: 343 IVAGDFHSFAICADEDGSKSDVYGWGLSNFHQVGLWDPNPDLRGDEQVTYFPKRVASLCG 402
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPSLQDKTI 346
K +G HHSL L +GKI A GR+ GR G++ + + EP I L + +
Sbjct: 403 KCIVAGDAGAHHSLFLTGDGKIIAIGRYTDGRCGVRVPNAALDGALEEPRVIEDLPGRAV 462
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILNSEGKIY 392
+A G+ AI +G Y WG QLG G +E+D E Y
Sbjct: 463 -KVASGDTCGGAIMEDGSAYVWGSQYIGQLGLGPREEDAYTPEKMPY 508
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 174/431 (40%), Gaps = 85/431 (19%)
Query: 139 GTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLES----VSGIVKIASGADHFVMLTSRGNL 193
G Y WG + +GL G+ ++ P ++ + + +IA+G H + LTS G
Sbjct: 108 GEAYVWG--QGDSAQLGLGGDVDERRRPTRVTTGAMGEARATRIAAGGTHTLALTSDGAC 165
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPG--EVPLKRKHIDDVFTGVYNTFISSKG 251
+ G + G LGR+ + A +A PG E+PL K + + ++ G
Sbjct: 166 YSWGNNDNGALGRVVNKDADPDAE-----YAPGKVELPLDVKVVMVSTGDSHGCALTESG 220
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ A+G + A + + T F + S ++ + SG H LAL+ EG
Sbjct: 221 EVWAWGQFRTTNGAWAFNPNTLDAQKTSFPFKIYAPASSKERAKAIVSGVDHVLALSREG 280
Query: 311 KIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPS---------------LQDKTI 346
+Y++G + GRLG + SE V PS + +
Sbjct: 281 GVYSWGCSEKGRLGRVDASEAEDNEQASDDVKRRLLTPSRVALPKSGGGIGSAFGGEPEV 340
Query: 347 TSIACGNCVSFAI--DSEGV---LYGWGMGNGYQLG--------NGKEDD---------- 383
T+I G+ SFAI D +G +YGWG+ N +Q+G G E
Sbjct: 341 TAIVAGDFHSFAICADEDGSKSDVYGWGLSNFHQVGLWDPNPDLRGDEQVTYFPKRVASL 400
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPSLQDK 423
L +GKI A GR+ GR G++ + + EP I L +
Sbjct: 401 CGKCIVAGDAGAHHSLFLTGDGKIIAIGRYTDGRCGVRVPNAALDGALEEPRVIEDLPGR 460
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIE-GKQLNNYTVLQ 481
+ +A G+ AI +G Y WG QLG G +E+D P K+ K + +
Sbjct: 461 AV-KVASGDTCGGAIMEDGSAYVWGSQYIGQLGLGPREEDAYTPEKMPYTKPMAGKVFAE 519
Query: 482 VASGGQHSVIL 492
++ GGQH+ L
Sbjct: 520 LSFGGQHAAAL 530
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP--SLQDKTITSIACGNCVSFAIDSEGV 443
++ G+ Y +G+ D +LGL + PT + ++ + T IA G + A+ S+G
Sbjct: 105 SASGEAYVWGQGDSAQLGLGGDVDERRRPTRVTTGAMGEARATRIAAGGTHTLALTSDGA 164
Query: 444 LYGWGMGNGYQLG-----NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
Y WG + LG + D P K+E + V+ V++G H L
Sbjct: 165 CYSWGNNDNGALGRVVNKDADPDAEYAPGKVELPL--DVKVVMVSTGDSHGCAL 216
>gi|119486678|ref|XP_001262325.1| Ran exchange factor Prp20/Pim1, putative [Neosartorya fischeri NRRL
181]
gi|119410482|gb|EAW20428.1| Ran exchange factor Prp20/Pim1, putative [Neosartorya fischeri NRRL
181]
Length = 544
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 195/405 (48%), Gaps = 76/405 (18%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV+V VGGMH V LT D K+ T
Sbjct: 123 VYVCGEGSSGELGLGAAKNAVDVKRPRLNPHLPADRVGVVQVAVGGMHCVALTHDNKILT 182
Query: 93 WGCNDEGALGRE-------------------------------------AEGDSEFIPQT 115
WG ND+GALGR+ A +F P+T
Sbjct: 183 WGVNDQGALGRDTTWEGGYKDIDDNKSDMDSDSDSDDDSGLNPYEATPTAISSDKFPPET 242
Query: 116 VNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI 174
V V+++AGDS S AL +DG VY WG+FR + G +G E +Q TP + S+ I
Sbjct: 243 V-----FVEVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFDAEHKVQPTPTLIPSLKKI 297
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+A G +H + L +G + + G +Q QLGR R RN G L+P E L K+
Sbjct: 298 KHLACGDNHVLALDEKGAVFSWGSGQQNQLGR---RIIERNRLNG---LQPREFGLP-KN 350
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I V G +++F + + G + A+GLN++ + G E P ++ SLS K
Sbjct: 351 IVHVSCGAFHSFAVDATGKVYAWGLNSFGETGI--REGAGDDEAAIIHPTVVDSLSGKNI 408
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIP 339
L G HHSLA++ +G+ +GR D + GLK + P + EPTP+P
Sbjct: 409 VQLCGGAHHSLAVSKDGQCLVWGRLDGFQTGLKIDTLPDDAVVKDERGRPRILIEPTPVP 468
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ T +A G+ S AID +G + WG YQ G G +DDI
Sbjct: 469 GIK---ATVVAAGSDHSIAIDVDGRAWSWGFSATYQTGQGTQDDI 510
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 166/391 (42%), Gaps = 104/391 (26%)
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRIT----------------QRSASRNARRGMSFLE-- 224
H V LT +LT G +QG LGR T + + G++ E
Sbjct: 170 HCVALTHDNKILTWGVNDQGALGRDTTWEGGYKDIDDNKSDMDSDSDSDDDSGLNPYEAT 229
Query: 225 PGEVPLKRKHIDDVF----TGVYNTF-ISSKGSILAFGL--NNYSQLG-EADSEVQKSGN 276
P + + + VF G ++F ++ G + +G +N LG +A+ +VQ
Sbjct: 230 PTAISSDKFPPETVFVEVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFDAEHKVQP--- 286
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
TP LI SL KK LA G +H LAL+ +G ++++G +LG + + E
Sbjct: 287 ----TPTLIPSL--KKIKHLACGDNHVLALDEKGAVFSWGSGQQNQLGRR-----IIERN 335
Query: 337 PIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL- 385
+ LQ K I ++CG SFA+D+ G +Y WG+ + G + G G ++ +
Sbjct: 336 RLNGLQPREFGLPKNIVHVSCGAFHSFAVDATGKVYAWGLNSFGETGIREGAGDDEAAII 395
Query: 386 --------------------------NSEGKIYAFGRHDYGRLGLKNVSEP--------- 410
+ +G+ +GR D + GLK + P
Sbjct: 396 HPTVVDSLSGKNIVQLCGGAHHSLAVSKDGQCLVWGRLDGFQTGLKIDTLPDDAVVKDER 455
Query: 411 -----VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-- 463
+ EPTP+P ++ T +A G+ S AID +G + WG YQ G G +DDI
Sbjct: 456 GRPRILIEPTPVPGIK---ATVVAAGSDHSIAIDVDGRAWSWGFSATYQTGQGTQDDIEV 512
Query: 464 ---LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+E + GK+LN +GGQ SV+
Sbjct: 513 ATVVENTAVRGKKLN-----WAGAGGQFSVL 538
>gi|367040685|ref|XP_003650723.1| hypothetical protein THITE_2110495 [Thielavia terrestris NRRL 8126]
gi|346997984|gb|AEO64387.1| hypothetical protein THITE_2110495 [Thielavia terrestris NRRL 8126]
Length = 589
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 192/395 (48%), Gaps = 57/395 (14%)
Query: 39 VLTCGQGDTGQLGLG------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G G+LGLG ++ K + +L VV+V GGMH LT+D K+ T
Sbjct: 168 IFVFGEGTAGELGLGSVRVDGKKPIDVKRPRINHNLKGVVQVACGGMHVAALTKDNKILT 227
Query: 93 WGCNDEGALGREAEGD----------------------SEFIP---QTVNLPK--KAVQI 125
WG ND+GALGR+ + E P T ++P+ K VQ+
Sbjct: 228 WGVNDQGALGRDTTWEGGLRDVDDEDEDSDDEDTGMNPKESTPGEIDTSDIPEGTKWVQL 287
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHF 184
A DS + AL G VY WG+FR + G +G K +Q+TP + +S I ++A+G +H
Sbjct: 288 VASDSATFALTTTGQVYGWGTFRSNEGILGFNKHVMVQRTPTHVPELSRIKQLAAGLNHI 347
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + + G +Q QL R R R+ + G +P R + + G Y+
Sbjct: 348 LALDDKNKIYAWGAGQQAQLAR---RLLERDDLAALYPTGIGALP-GRAKAEKIACGSYH 403
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+F I +K ++ +GLNNY++LG D Q G P LIKSL+ + +A G+HHS
Sbjct: 404 SFVIDNKARVIGWGLNNYAELGVEDEAGQDGG--FVMRPQLIKSLAGYEIADIAGGEHHS 461
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVS------------EP--VTEPTPIPSLQDKTITSI 349
LA +G++ +GR D ++G + S +P + PT +P + + +
Sbjct: 462 LACTKDGQLITWGRIDGHQVGQPSASFSEDNTIWDERQKPRILLVPTVVPDI--GGVVRV 519
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
A G SFAI ++G +Y WG YQ G G DDI
Sbjct: 520 AAGTDHSFAITADGKVYSWGFSANYQTGQGTTDDI 554
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 171/406 (42%), Gaps = 81/406 (19%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-----------QRS 211
K P ++ G+V++A G H LT +LT G +QG LGR T +
Sbjct: 195 KRPRINHNLKGVVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTWEGGLRDVDDEDE 254
Query: 212 ASRNARRGMSFLE--PGEV-----PLKRKHIDDVFTGVYNTFISSKGSILAFGL--NNYS 262
S + GM+ E PGE+ P K + V + +++ G + +G +N
Sbjct: 255 DSDDEDTGMNPKESTPGEIDTSDIPEGTKWVQLVASDSATFALTTTGQVYGWGTFRSNEG 314
Query: 263 QLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG VQ+ TP + LS + LA+G +H LAL+ + KIYA+G
Sbjct: 315 ILGFNKHVMVQR-------TPTHVPELS--RIKQLAAGLNHILALDDKNKIYAWGAGQQA 365
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+L L+ PT I +L + IACG+ SF ID++ + GWG+ N +LG
Sbjct: 366 QLARRLLERDDLAALYPTGIGALPGRAKAEKIACGSYHSFVIDNKARVIGWGLNNYAELG 425
Query: 378 NGKED----------------------DILNSE---------GKIYAFGRHDYGRLGLKN 406
E DI E G++ +GR D ++G +
Sbjct: 426 VEDEAGQDGGFVMRPQLIKSLAGYEIADIAGGEHHSLACTKDGQLITWGRIDGHQVGQPS 485
Query: 407 VS------------EP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
S +P + PT +P + + +A G SFAI ++G +Y WG
Sbjct: 486 ASFSEDNTIWDERQKPRILLVPTVVPDIGG--VVRVAAGTDHSFAITADGKVYSWGFSAN 543
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
YQ G G DDI P I+ + + ++ +GGQ+ ++ A P N
Sbjct: 544 YQTGQGTTDDIESPTLIDNSAIRDRKIVFAGAGGQYGILGALPLEN 589
>gi|145248596|ref|XP_001400637.1| Ran exchange factor Prp20/Pim1 [Aspergillus niger CBS 513.88]
gi|134081304|emb|CAK41807.1| unnamed protein product [Aspergillus niger]
Length = 573
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 193/402 (48%), Gaps = 72/402 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFA-LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV + A L D V+V VGGMH V LT D ++ T
Sbjct: 153 VYVCGEGSSGELGLGSAKNAVDVKRPRLNANLPADRVGAVQVAVGGMHCVALTYDNRILT 212
Query: 93 WGCNDEGALGREAEGDS-------------------------EFIPQTV---NLPKKAV- 123
WG ND+GALGR+ D E P + PK V
Sbjct: 213 WGVNDQGALGRDTAWDGGYKDIDEANNGSDSESDDDIALNPYESTPTAIPSEAFPKDTVF 272
Query: 124 -QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGA 181
Q++AGDS S AL +DG VY WG+FR + G +G +Q TP + S+ I +A G
Sbjct: 273 VQVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFDAANKVQHTPSLIPSLKKIKHLACGD 332
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L +G +L+ G +Q QLGR R RN G L+P E L K+I + G
Sbjct: 333 NHVLALNDKGAVLSWGSGQQNQLGR---RIIERNRLNG---LQPREFGLP-KNIVHIGCG 385
Query: 242 VYNTF-ISSKGSILAFGLNNYSQ----LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+++F + G + A+GLN++ + G D E P ++ SLS K T +
Sbjct: 386 AFHSFAVHQSGKVYAWGLNSFGETGIRAGAGDDEA------AIVHPTVVDSLSGKAVTQI 439
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLK--NVSEP------------VTEPTPIPSLQ 342
G HHSLA+ ++G+ +GR D + GLK +++E + +P +P ++
Sbjct: 440 CGGAHHSLAIANDGECLVWGRLDGYQTGLKIDSLAEDAVIKDERGRPRILIDPKAVPGVK 499
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++A G+ S ID EG + WG YQ G G DDI
Sbjct: 500 ---AIAVAAGSDHSLVIDVEGRPWSWGFSATYQTGQGTPDDI 538
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 172/426 (40%), Gaps = 91/426 (21%)
Query: 116 VNLPKK---AVQISAGDSHSVALLEDGTVYAWG---------------SFRD----SHGS 153
NLP AVQ++ G H VAL D + WG ++D ++GS
Sbjct: 182 ANLPADRVGAVQVAVGGMHCVALTYDNRILTWGVNDQGALGRDTAWDGGYKDIDEANNGS 241
Query: 154 MGLKGEGI-----QKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTAGC--PEQ 201
+ I + TP + S + V++A+G LT G + G
Sbjct: 242 DSESDDDIALNPYESTPTAIPSEAFPKDTVFVQVAAGDSSSFALTDDGQVYGWGTFRSND 301
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
G LG P +P +K I + G + ++ KG++L++G
Sbjct: 302 GILGFDAANKVQHT---------PSLIPSLKK-IKHLACGDNHVLALNDKGAVLSWGSGQ 351
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQHHSLALNSEGKIYA 314
+QLG E + + L ++F + + G HS A++ GK+YA
Sbjct: 352 QNQLGRRIIERNR-----------LNGLQPREFGLPKNIVHIGCGAFHSFAVHQSGKVYA 400
Query: 315 FGRHDYGRLGLK----NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+G + +G G++ + + PT + SL K +T I G S AI ++G WG
Sbjct: 401 WGLNSFGETGIRAGAGDDEAAIVHPTVVDSLSGKAVTQICGGAHHSLAIANDGECLVWGR 460
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+GYQ G + D L + I + + GR + + +P +P ++ ++A
Sbjct: 461 LDGYQ--TGLKIDSLAEDAVI----KDERGRPRI------LIDPKAVPGVK---AIAVAA 505
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASG 485
G+ S ID EG + WG YQ G G DDI +E + GK+LN G
Sbjct: 506 GSDHSLVIDVEGRPWSWGFSATYQTGQGTPDDIEVATVIENTAVRGKKLN-----WAGGG 560
Query: 486 GQHSVI 491
GQ SV
Sbjct: 561 GQFSVF 566
>gi|350639170|gb|EHA27524.1| hypothetical protein ASPNIDRAFT_56504 [Aspergillus niger ATCC 1015]
Length = 531
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 193/402 (48%), Gaps = 72/402 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFA-LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV + A L D V+V VGGMH V LT D ++ T
Sbjct: 111 VYVCGEGSSGELGLGSAKNAVDVKRPRLNANLPADRVGAVQVAVGGMHCVALTYDNRILT 170
Query: 93 WGCNDEGALGREAEGDS-------------------------EFIPQTV---NLPKKAV- 123
WG ND+GALGR+ D E P + PK V
Sbjct: 171 WGVNDQGALGRDTAWDGGYKDIDEANNGSDSESDDDIALNPYESTPTAIPSEAFPKDTVF 230
Query: 124 -QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGA 181
Q++AGDS S AL +DG VY WG+FR + G +G +Q TP + S+ I +A G
Sbjct: 231 VQVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFDAANKVQHTPSLIPSLKKIKHLACGD 290
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+H + L +G +L+ G +Q QLGR R RN G L+P E L K+I + G
Sbjct: 291 NHVLALNDKGAVLSWGSGQQNQLGR---RIIERNRLNG---LQPREFGLP-KNIVHIGCG 343
Query: 242 VYNTF-ISSKGSILAFGLNNYSQL----GEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+++F + G + A+GLN++ + G D E P ++ SLS K T +
Sbjct: 344 AFHSFAVHQSGKVYAWGLNSFGETGIRAGAGDDEA------AIVHPTVVDSLSGKAVTQI 397
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLK--NVSEP------------VTEPTPIPSLQ 342
G HHSLA+ ++G+ +GR D + GLK +++E + +P +P ++
Sbjct: 398 CGGAHHSLAIANDGECLVWGRLDGYQTGLKIDSLAEDAVIKDERGRPRILIDPKAVPGVK 457
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++A G+ S ID EG + WG YQ G G DDI
Sbjct: 458 ---AIAVAAGSDHSLVIDVEGRPWSWGFSATYQTGQGTPDDI 496
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 172/426 (40%), Gaps = 91/426 (21%)
Query: 116 VNLPKK---AVQISAGDSHSVALLEDGTVYAWG---------------SFRD----SHGS 153
NLP AVQ++ G H VAL D + WG ++D ++GS
Sbjct: 140 ANLPADRVGAVQVAVGGMHCVALTYDNRILTWGVNDQGALGRDTAWDGGYKDIDEANNGS 199
Query: 154 MGLKGEGI-----QKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTAGC--PEQ 201
+ I + TP + S + V++A+G LT G + G
Sbjct: 200 DSESDDDIALNPYESTPTAIPSEAFPKDTVFVQVAAGDSSSFALTDDGQVYGWGTFRSND 259
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
G LG P +P +K I + G + ++ KG++L++G
Sbjct: 260 GILGFDAANKVQHT---------PSLIPSLKK-IKHLACGDNHVLALNDKGAVLSWGSGQ 309
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQHHSLALNSEGKIYA 314
+QLG E + + L ++F + + G HS A++ GK+YA
Sbjct: 310 QNQLGRRIIERNR-----------LNGLQPREFGLPKNIVHIGCGAFHSFAVHQSGKVYA 358
Query: 315 FGRHDYGRLGLK----NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+G + +G G++ + + PT + SL K +T I G S AI ++G WG
Sbjct: 359 WGLNSFGETGIRAGAGDDEAAIVHPTVVDSLSGKAVTQICGGAHHSLAIANDGECLVWGR 418
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+GYQ G + D L + I + + GR + + +P +P ++ ++A
Sbjct: 419 LDGYQ--TGLKIDSLAEDAVI----KDERGRPRI------LIDPKAVPGVK---AIAVAA 463
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASG 485
G+ S ID EG + WG YQ G G DDI +E + GK+LN G
Sbjct: 464 GSDHSLVIDVEGRPWSWGFSATYQTGQGTPDDIEVATVIENTAVRGKKLN-----WAGGG 518
Query: 486 GQHSVI 491
GQ SV
Sbjct: 519 GQFSVF 524
>gi|303320911|ref|XP_003070450.1| Regulator of chromosome condensation family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110146|gb|EER28305.1| Regulator of chromosome condensation family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 580
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 201/431 (46%), Gaps = 72/431 (16%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVME-RK 60
+V A P + V +EA PT K + G+G +G+LGLG DV R
Sbjct: 116 RVTASPAVKPPKPKVVINEA-PTEKLN-----IYVFGEGSSGELGLGTAKNAVDVKRPRL 169
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-- 118
L+ D VV++ GGMH V LT D K+YTWG ND+GALGR+ + +
Sbjct: 170 NPLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSD 229
Query: 119 ------------PKKA----------------VQISAGDSHSVALLEDGTVYAWGSFRDS 150
PK+A V+++AGDS S AL +DG VY WG+FR +
Sbjct: 230 SDSDDGSDSGMNPKEATPTPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGN 289
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RIT 208
G +G +Q TP + S+ I IA G +H + L ++G + G +Q QLG RI
Sbjct: 290 EGILGFDATTRVQTTPKLIPSLKKIKHIACGDNHALALDTKGAVFAWGSGQQNQLGRRIV 349
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
+R+ ++ L P E L K+I + G +++F I G + ++GLN+Y + G
Sbjct: 350 ERTK-------LNGLHPREFGLP-KNITYIDCGSFHSFAIHQTGKVYSWGLNSYGETGI- 400
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ S P ++KSL DK L G HHSLA+ +G+ +GR D + GL
Sbjct: 401 -PQGAGSDEAVILHPEVVKSLKDKNVIQLCGGSHHSLAVTKDGECLVWGRVDGFQTGLDI 459
Query: 328 VSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
S P ++ PT +P + K +A G S AI +G + WG
Sbjct: 460 KSLPDDAVIKDDRDRARILSVPTAVPGIDAKF---VAAGADHSIAIAKDGRAWTWGFSAN 516
Query: 374 YQLGNGKEDDI 384
YQ G G +DDI
Sbjct: 517 YQTGQGTDDDI 527
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 168/407 (41%), Gaps = 102/407 (25%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT--------------QR 210
PL L G+V+IA+G H V LT + T G +QG LGR T
Sbjct: 171 PLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSDS 230
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDD------VFTGVYNTF-ISSKGSILAFGL--NNY 261
+ + GM+ E P+ + + V G ++F ++ G + +G N
Sbjct: 231 DSDDGSDSGMNPKEATPTPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGNE 290
Query: 262 SQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
LG +A + VQ TP LI SL KK +A G +H+LAL+++G ++A+G
Sbjct: 291 GILGFDATTRVQT-------TPKLIPSL--KKIKHIACGDNHALALDTKGAVFAWGSGQQ 341
Query: 321 GRLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN-- 372
+LG + + E T + L K IT I CG+ SFAI G +Y WG+ +
Sbjct: 342 NQLGRR-----IVERTKLNGLHPREFGLPKNITYIDCGSFHSFAIHQTGKVYSWGLNSYG 396
Query: 373 --GYQLGNGKEDDIL---------------------------NSEGKIYAFGRHDYGRLG 403
G G G ++ ++ +G+ +GR D + G
Sbjct: 397 ETGIPQGAGSDEAVILHPEVVKSLKDKNVIQLCGGSHHSLAVTKDGECLVWGRVDGFQTG 456
Query: 404 LKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
L S P ++ PT +P + K + A G S AI +G + WG
Sbjct: 457 LDIKSLPDDAVIKDDRDRARILSVPTAVPGIDAKFV---AAGADHSIAIAKDGRAWTWGF 513
Query: 450 GNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G +DDI ++ + GK LN +GGQ+SV+
Sbjct: 514 SANYQTGQGTDDDIEVATVVDNTAVRGKMLN-----WAGAGGQYSVL 555
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
F +A+G S AL +G +Y +G R + G LG + T P IPSL K I IA
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSL--KKIKHIA 318
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG+ + A+D++G ++ WG G QLG + K+ ++G
Sbjct: 319 CGDNHALALDTKGAVFAWGSGQQNQLGRR-----IVERTKLNGLHPREFG---------- 363
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDD-ILE 465
+P K IT I CG+ SFAI G +Y WG+ + G G G ++ IL
Sbjct: 364 ------LP----KNITYIDCGSFHSFAIHQTGKVYSWGLNSYGETGIPQGAGSDEAVILH 413
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P + K L + V+Q+ G HS+ + K
Sbjct: 414 PEVV--KSLKDKNVIQLCGGSHHSLAVTK 440
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 104/259 (40%), Gaps = 62/259 (23%)
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQ 300
V N + K +I FG + +LG ++ P L L+DK +A+G
Sbjct: 131 VINEAPTEKLNIYVFGEGSSGELGLGTAKNAVDVKRPRLNPLL---LADKIGVVQIATGG 187
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSE-------------------------PVTEP 335
H +AL + KIY +G +D G LG E P
Sbjct: 188 MHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSDSDSDDGSDSGMNPKEATP 247
Query: 336 TPIPS--LQDKTI-TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
TPIP+ + TI +A G+ SFA+ +G +YGWG G +
Sbjct: 248 TPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGNE----------------- 290
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
G LG + T P IPSL K I IACG+ + A+D++G ++ WG G
Sbjct: 291 -------GILGFDATTRVQTTPKLIPSL--KKIKHIACGDNHALALDTKGAVFAWGSGQQ 341
Query: 453 YQLGNGKEDDILEPMKIEG 471
QLG I+E K+ G
Sbjct: 342 NQLGR----RIVERTKLNG 356
>gi|119179563|ref|XP_001241353.1| hypothetical protein CIMG_08516 [Coccidioides immitis RS]
gi|392866729|gb|EAS30097.2| ran exchange factor Prp20/Pim1 [Coccidioides immitis RS]
Length = 580
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 200/431 (46%), Gaps = 72/431 (16%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVME-RK 60
+V A P + V +EA PT K + G+G +G+LGLG DV R
Sbjct: 116 RVTASPALKPPKPKVVINEA-PTEKLN-----IYVFGEGSSGELGLGTAKNAVDVKRPRL 169
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-- 118
L+ D VV++ GGMH V LT D K+YTWG ND+GALGR+ + +
Sbjct: 170 NPLLLADTIGVVQIATGGMHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSD 229
Query: 119 ------------PKKA----------------VQISAGDSHSVALLEDGTVYAWGSFRDS 150
PK+A V+++AGDS S AL +DG VY WG+FR +
Sbjct: 230 SDSDDGSDSGMNPKEATPTPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGN 289
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RIT 208
G +G +Q TP + S+ I IA G +H + L ++G + G +Q QLG RI
Sbjct: 290 EGILGFDATTRVQTTPKLIPSLKKIKHIACGDNHALALDTKGAVFAWGSGQQNQLGRRIV 349
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
+R+ ++ L P E L K+I + G +++F I G + ++GLN Y + G
Sbjct: 350 ERTK-------LNGLHPREFGLP-KNITYIGCGSFHSFAIHQTGKVYSWGLNTYGETGI- 400
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ S P ++KSL DK L G HHSLA+ +G+ +GR D + GL
Sbjct: 401 -PQGAGSDEAVILHPEVVKSLKDKNVIQLCGGSHHSLAVTKDGECLVWGRVDGFQTGLDI 459
Query: 328 VSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
S P ++ PT +P + K +A G S AI +G + WG
Sbjct: 460 KSLPDDAVIKDDRDRARILSVPTAVPGIDAKF---VAAGADHSIAIAKDGRAWTWGFSAN 516
Query: 374 YQLGNGKEDDI 384
YQ G G +DDI
Sbjct: 517 YQTGQGTDDDI 527
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 167/407 (41%), Gaps = 102/407 (25%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT--------------QR 210
PL L G+V+IA+G H V LT + T G +QG LGR T
Sbjct: 171 PLLLADTIGVVQIATGGMHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSDS 230
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDD------VFTGVYNTF-ISSKGSILAFGL--NNY 261
+ + GM+ E P+ + + V G ++F ++ G + +G N
Sbjct: 231 DSDDGSDSGMNPKEATPTPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGNE 290
Query: 262 SQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
LG +A + VQ TP LI SL KK +A G +H+LAL+++G ++A+G
Sbjct: 291 GILGFDATTRVQT-------TPKLIPSL--KKIKHIACGDNHALALDTKGAVFAWGSGQQ 341
Query: 321 GRLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN-- 372
+LG + + E T + L K IT I CG+ SFAI G +Y WG+
Sbjct: 342 NQLGRR-----IVERTKLNGLHPREFGLPKNITYIGCGSFHSFAIHQTGKVYSWGLNTYG 396
Query: 373 --GYQLGNGKEDDIL---------------------------NSEGKIYAFGRHDYGRLG 403
G G G ++ ++ +G+ +GR D + G
Sbjct: 397 ETGIPQGAGSDEAVILHPEVVKSLKDKNVIQLCGGSHHSLAVTKDGECLVWGRVDGFQTG 456
Query: 404 LKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
L S P ++ PT +P + K + A G S AI +G + WG
Sbjct: 457 LDIKSLPDDAVIKDDRDRARILSVPTAVPGIDAKFV---AAGADHSIAIAKDGRAWTWGF 513
Query: 450 GNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G +DDI ++ + GK LN +GGQ+SV+
Sbjct: 514 SANYQTGQGTDDDIEVATVVDNTAVRGKMLN-----WAGAGGQYSVL 555
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
F +A+G S AL +G +Y +G R + G LG + T P IPSL K I IA
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSL--KKIKHIA 318
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG+ + A+D++G ++ WG G QLG + K+ ++G
Sbjct: 319 CGDNHALALDTKGAVFAWGSGQQNQLGRR-----IVERTKLNGLHPREFG---------- 363
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDD-ILE 465
+P K IT I CG+ SFAI G +Y WG+ G G G ++ IL
Sbjct: 364 ------LP----KNITYIGCGSFHSFAIHQTGKVYSWGLNTYGETGIPQGAGSDEAVILH 413
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P + K L + V+Q+ G HS+ + K
Sbjct: 414 PEVV--KSLKDKNVIQLCGGSHHSLAVTK 440
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 103/259 (39%), Gaps = 62/259 (23%)
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQ 300
V N + K +I FG + +LG ++ P L L+D +A+G
Sbjct: 131 VINEAPTEKLNIYVFGEGSSGELGLGTAKNAVDVKRPRLNPLL---LADTIGVVQIATGG 187
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSE-------------------------PVTEP 335
H +AL + KIY +G +D G LG E P
Sbjct: 188 MHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSDSDSDDGSDSGMNPKEATP 247
Query: 336 TPIPS--LQDKTI-TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
TPIP+ + TI +A G+ SFA+ +G +YGWG G +
Sbjct: 248 TPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGNE----------------- 290
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
G LG + T P IPSL K I IACG+ + A+D++G ++ WG G
Sbjct: 291 -------GILGFDATTRVQTTPKLIPSL--KKIKHIACGDNHALALDTKGAVFAWGSGQQ 341
Query: 453 YQLGNGKEDDILEPMKIEG 471
QLG I+E K+ G
Sbjct: 342 NQLGR----RIVERTKLNG 356
>gi|254574068|ref|XP_002494143.1| Nucleotide exchange factor for Gsp1p, localizes to the nucleus
[Komagataella pastoris GS115]
gi|238033942|emb|CAY71964.1| Nucleotide exchange factor for Gsp1p, localizes to the nucleus
[Komagataella pastoris GS115]
gi|328354038|emb|CCA40435.1| Regulator of chromosome condensation [Komagataella pastoris CBS
7435]
Length = 482
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 199/418 (47%), Gaps = 57/418 (13%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDV------MERKTFALVEDLDNVVEVVVGGMHTVCL 84
K KT + G G +LGLGP R L +D +V+ VGGMHT+ L
Sbjct: 44 KAKTEKLDLFVFGTGSMSELGLGPAASTKEVKRPRLNPLLKKDEVGIVDFAVGGMHTLAL 103
Query: 85 TEDGKVYTWGCNDEGALGREAE---------------------GDSEFIPQTVN-LP-KK 121
+V++WG ND G LGR+ + E P V LP +
Sbjct: 104 DYKNQVWSWGGNDSGVLGRDTSQAQEQLRDMDDEDDDDEDGDLNELESTPGLVEGLPDNQ 163
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGIVKIASG 180
VQ+ A D+ S LLE+G V+AWG+FR + G +G L EGIQKTP + IV++ASG
Sbjct: 164 IVQLIATDNLSGVLLENGEVWAWGTFRCNEGLLGFLDSEGIQKTPRHIPGFVNIVQVASG 223
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
DH + L ++G G +Q QLGR I +R+ + LEP E L++ I V
Sbjct: 224 KDHIIGLDNKGIPYAWGNGQQFQLGRRILERTR-------LQSLEPREFGLRK--IKFVG 274
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+G +++F IS G + A+GLN + Q G + P I+ L+ K +
Sbjct: 275 SGEFHSFAISENGKVYAWGLNQFGQCG---VPINIEDGAVIAKPTEIEELTGKDVVYITG 331
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV---------TEPTPIPSLQDK--TIT 347
G+HHSLAL G++Y FGR+D +G+K + P T P+P+ I
Sbjct: 332 GEHHSLALTKSGEVYVFGRYDMKEIGIKKDNLPEDAYKDANGNTRAVPVPTKLTTLPKIK 391
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI--YAFGRHDYGRLG 403
++ G+ S AI GV+Y WG + Y +G G D+ + + +I A HD +G
Sbjct: 392 AVTAGSHHSLAITESGVVYSWGFADTYAVGLGPVDEDVETPTRIENTATKEHDIKIIG 449
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 158/390 (40%), Gaps = 78/390 (20%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR---------- 214
PL + GIV A G H + L + + + G + G LGR T ++ +
Sbjct: 81 PLLKKDEVGIVDFAVGGMHTLALDYKNQVWSWGGNDSGVLGRDTSQAQEQLRDMDDEDDD 140
Query: 215 NARRGMSFLE--PGEVP--LKRKHIDDVFTGVYNTFISSKGSILAFGLN--NYSQLGEAD 268
+ ++ LE PG V + + + T + + G + A+G N LG D
Sbjct: 141 DEDGDLNELESTPGLVEGLPDNQIVQLIATDNLSGVLLENGEVWAWGTFRCNEGLLGFLD 200
Query: 269 SE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
SE +QK TP I + +ASG+ H + L+++G YA+G +LG +
Sbjct: 201 SEGIQK-------TPRHIPGFVN--IVQVASGKDHIIGLDNKGIPYAWGNGQQFQLGRR- 250
Query: 328 VSEPVTEPTPIPSLQDK-----TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----- 377
+ E T + SL+ + I + G SFAI G +Y WG+ Q G
Sbjct: 251 ----ILERTRLQSLEPREFGLRKIKFVGSGEFHSFAISENGKVYAWGLNQFGQCGVPINI 306
Query: 378 ---------------NGKE----------DDILNSEGKIYAFGRHDYGRLGLKNVSEPV- 411
GK+ L G++Y FGR+D +G+K + P
Sbjct: 307 EDGAVIAKPTEIEELTGKDVVYITGGEHHSLALTKSGEVYVFGRYDMKEIGIKKDNLPED 366
Query: 412 --------TEPTPIPSLQDK--TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
T P+P+ I ++ G+ S AI GV+Y WG + Y +G G D
Sbjct: 367 AYKDANGNTRAVPVPTKLTTLPKIKAVTAGSHHSLAITESGVVYSWGFADTYAVGLGPVD 426
Query: 462 -DILEPMKIEGKQLNNYTVLQVASGGQHSV 490
D+ P +IE + + + +GGQ SV
Sbjct: 427 EDVETPTRIENTATKEHDIKIIGAGGQFSV 456
>gi|320033050|gb|EFW14999.1| ran exchange factor Prp20/Pim1 [Coccidioides posadasii str.
Silveira]
Length = 580
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 201/431 (46%), Gaps = 72/431 (16%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVME-RK 60
+V A P + V +EA PT K + G+G +G+LGLG DV R
Sbjct: 116 RVTASPAVKPPKPKVVINEA-PTEKLN-----IYVFGEGSSGELGLGTAKNAVDVKRPRL 169
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-- 118
L+ D VV++ GGMH V LT D K+YTWG ND+GALGR+ + +
Sbjct: 170 NPLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSD 229
Query: 119 ------------PKKA----------------VQISAGDSHSVALLEDGTVYAWGSFRDS 150
PK+A V+++AGDS S AL +DG VY WG+FR +
Sbjct: 230 SDSDDGSDSGMNPKEATPTPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGN 289
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RIT 208
G +G +Q TP + S+ I IA G +H + L ++G + G +Q QLG RI
Sbjct: 290 EGILGFDATTRVQTTPKLIPSLKKIKHIACGDNHALALDTKGAVFAWGSGQQNQLGRRIV 349
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
+R+ ++ L P E L K+I + G +++F I G + ++GLN+Y + G
Sbjct: 350 ERTK-------LNGLHPREFGLP-KNITYIGCGSFHSFAIHQTGKVYSWGLNSYGETGI- 400
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ S P ++KSL DK L G HHSLA+ +G+ +GR D + GL
Sbjct: 401 -PQGAGSDEAVILHPEVVKSLKDKNVIQLCGGSHHSLAVTKDGECLVWGRVDGFQTGLDI 459
Query: 328 VSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
S P ++ PT +P + K +A G S AI +G + WG
Sbjct: 460 KSLPDDAVIKDDRDRARILSVPTAVPGIDAKF---VAAGADHSIAIAKDGRAWTWGFSAN 516
Query: 374 YQLGNGKEDDI 384
YQ G G +DDI
Sbjct: 517 YQTGQGTDDDI 527
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 168/407 (41%), Gaps = 102/407 (25%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT--------------QR 210
PL L G+V+IA+G H V LT + T G +QG LGR T
Sbjct: 171 PLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSDS 230
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDD------VFTGVYNTF-ISSKGSILAFGL--NNY 261
+ + GM+ E P+ + + V G ++F ++ G + +G N
Sbjct: 231 DSDDGSDSGMNPKEATPTPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGNE 290
Query: 262 SQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
LG +A + VQ TP LI SL KK +A G +H+LAL+++G ++A+G
Sbjct: 291 GILGFDATTRVQT-------TPKLIPSL--KKIKHIACGDNHALALDTKGAVFAWGSGQQ 341
Query: 321 GRLGLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN-- 372
+LG + + E T + L K IT I CG+ SFAI G +Y WG+ +
Sbjct: 342 NQLGRR-----IVERTKLNGLHPREFGLPKNITYIGCGSFHSFAIHQTGKVYSWGLNSYG 396
Query: 373 --GYQLGNGKEDDIL---------------------------NSEGKIYAFGRHDYGRLG 403
G G G ++ ++ +G+ +GR D + G
Sbjct: 397 ETGIPQGAGSDEAVILHPEVVKSLKDKNVIQLCGGSHHSLAVTKDGECLVWGRVDGFQTG 456
Query: 404 LKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
L S P ++ PT +P + K + A G S AI +G + WG
Sbjct: 457 LDIKSLPDDAVIKDDRDRARILSVPTAVPGIDAKFV---AAGADHSIAIAKDGRAWTWGF 513
Query: 450 GNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G +DDI ++ + GK LN +GGQ+SV+
Sbjct: 514 SANYQTGQGTDDDIEVATVVDNTAVRGKMLN-----WAGAGGQYSVL 555
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
F +A+G S AL +G +Y +G R + G LG + T P IPSL K I IA
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSL--KKIKHIA 318
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG+ + A+D++G ++ WG G QLG + K+ ++G
Sbjct: 319 CGDNHALALDTKGAVFAWGSGQQNQLGRR-----IVERTKLNGLHPREFG---------- 363
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDD-ILE 465
+P K IT I CG+ SFAI G +Y WG+ + G G G ++ IL
Sbjct: 364 ------LP----KNITYIGCGSFHSFAIHQTGKVYSWGLNSYGETGIPQGAGSDEAVILH 413
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P + K L + V+Q+ G HS+ + K
Sbjct: 414 PEVV--KSLKDKNVIQLCGGSHHSLAVTK 440
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 104/259 (40%), Gaps = 62/259 (23%)
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQ 300
V N + K +I FG + +LG ++ P L L+DK +A+G
Sbjct: 131 VINEAPTEKLNIYVFGEGSSGELGLGTAKNAVDVKRPRLNPLL---LADKIGVVQIATGG 187
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSE-------------------------PVTEP 335
H +AL + KIY +G +D G LG E P
Sbjct: 188 MHCVALTHDNKIYTWGVNDQGALGRDTTWEGKLKDIDDAGSDSDSDDGSDSGMNPKEATP 247
Query: 336 TPIPS--LQDKTI-TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
TPIP+ + TI +A G+ SFA+ +G +YGWG G +
Sbjct: 248 TPIPADYFPEGTIFVEVAAGDSSSFALTDDGFVYGWGTFRGNE----------------- 290
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
G LG + T P IPSL K I IACG+ + A+D++G ++ WG G
Sbjct: 291 -------GILGFDATTRVQTTPKLIPSL--KKIKHIACGDNHALALDTKGAVFAWGSGQQ 341
Query: 453 YQLGNGKEDDILEPMKIEG 471
QLG I+E K+ G
Sbjct: 342 NQLGR----RIVERTKLNG 356
>gi|169610477|ref|XP_001798657.1| hypothetical protein SNOG_08337 [Phaeosphaeria nodorum SN15]
gi|160702077|gb|EAT84613.2| hypothetical protein SNOG_08337 [Phaeosphaeria nodorum SN15]
Length = 597
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 189/403 (46%), Gaps = 64/403 (15%)
Query: 39 VLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
V G+G G+ G G ++R + + VV + GGMH + LT+D K+ +WG
Sbjct: 169 VFVFGEGANGENGFGATKKAIDIKRPRYNELLTKHEVVRIATGGMHVLALTKDNKILSWG 228
Query: 95 CNDEGALGREAEG-------------------------DSEFIPQTVN----LPKKA-VQ 124
ND GALGR + D E P ++ LP V
Sbjct: 229 VNDSGALGRNTKDAVVPTRDLDADDSDSDSEDETGGLIDLEATPTAISDEYFLPDTTFVD 288
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGADH 183
I+AGDS S A+ +G VY WG+FR + G +G KG+G + + P +E V+ +IA G +H
Sbjct: 289 IAAGDSCSFAITTEGAVYGWGTFRKNEGILGFKGKGDVAEYPQYIEGVTKATQIACGTNH 348
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID----DVF 239
+LT GN+ G +Q QLGR R RN G+ + G L K + +
Sbjct: 349 VFVLTKDGNVYAWGNGQQNQLGR---RLTERNLTEGLFPSKVGFRDLSFKKVSHKLVSIS 405
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+G Y+ F I+ G + ++G+NNY + G + N TP ++ SL K+ +A+
Sbjct: 406 SGDYHGFAIAEDGHVWSWGVNNYCETGYPANAGADDAN--VLTPRIVASLEGKQVQQVAA 463
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGL---------------KNVSEP--VTEPTPIPSL 341
G HH++A+ +G+ +GR D + GL KN +P + EPTP+ L
Sbjct: 464 GSHHNIAITKDGQALVWGRCDGSQTGLPSETLASIDDEKRLMKNNGKPKILIEPTPLSDL 523
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
K I + +CG S ID +G Y WG YQ G +DDI
Sbjct: 524 --KNIVAGSCGPDHSIVIDKDGKAYSWGFSANYQTAQGTDDDI 564
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 163/401 (40%), Gaps = 90/401 (22%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ------RSASRNARRGMSFLEPG- 226
+V+IA+G H + LT +L+ G + G LGR T+ R + S E G
Sbjct: 205 VVRIATGGMHVLALTKDNKILSWGVNDSGALGRNTKDAVVPTRDLDADDSDSDSEDETGG 264
Query: 227 -------------EVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL--NNYSQLGEADSE 270
E L D+ G +F I+++G++ +G N LG
Sbjct: 265 LIDLEATPTAISDEYFLPDTTFVDIAAGDSCSFAITTEGAVYGWGTFRKNEGILG----- 319
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ G+ + P I+ ++ K T +A G +H L +G +YA+G +LG +
Sbjct: 320 FKGKGDVAEY-PQYIEGVT--KATQIACGTNHVFVLTKDGNVYAWGNGQQNQLGRRLTER 376
Query: 331 PVTE---PTPI--PSLQDKTIT----SIACGNCVSFAIDSEGVLYGWGMGN----GYQLG 377
+TE P+ + L K ++ SI+ G+ FAI +G ++ WG+ N GY
Sbjct: 377 NLTEGLFPSKVGFRDLSFKKVSHKLVSISSGDYHGFAIAEDGHVWSWGVNNYCETGYPAN 436
Query: 378 NGKEDD---------------------------ILNSEGKIYAFGRHDYGRLGL------ 404
G +D + +G+ +GR D + GL
Sbjct: 437 AGADDANVLTPRIVASLEGKQVQQVAAGSHHNIAITKDGQALVWGRCDGSQTGLPSETLA 496
Query: 405 ---------KNVSEP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
KN +P + EPTP+ L K I + +CG S ID +G Y WG Y
Sbjct: 497 SIDDEKRLMKNNGKPKILIEPTPLSDL--KNIVAGSCGPDHSIVIDKDGKAYSWGFSANY 554
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Q G +DDI P I+ + + ++ GGQ+ V+ +K
Sbjct: 555 QTAQGTDDDIDTPTLIDNTAVRDVKLVWAGCGGQYGVLASK 595
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 64/250 (25%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV--------- 332
P + L+ + +A+G H LAL + KI ++G +D G LG +N + V
Sbjct: 194 PRYNELLTKHEVVRIATGGMHVLALTKDNKILSWGVNDSGALG-RNTKDAVVPTRDLDAD 252
Query: 333 -----------------TEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
PT I L D T IA G+ SFAI +EG +YGWG
Sbjct: 253 DSDSDSEDETGGLIDLEATPTAISDEYFLPDTTFVDIAAGDSCSFAITTEGAVYGWGTF- 311
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
R + G LG K + P I + T IACG
Sbjct: 312 -----------------------RKNEGILGFKGKGDVAEYPQYIEGVT--KATQIACGT 346
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILE---PMKIEGKQLN----NYTVLQVAS 484
F + +G +Y WG G QLG E ++ E P K+ + L+ ++ ++ ++S
Sbjct: 347 NHVFVLTKDGNVYAWGNGQQNQLGRRLTERNLTEGLFPSKVGFRDLSFKKVSHKLVSISS 406
Query: 485 GGQHSVILAK 494
G H +A+
Sbjct: 407 GDYHGFAIAE 416
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 17/194 (8%)
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPS--LQDKTITSIACGNCVSFAIDSEGVLYGW 368
K++ FG G G + + P + L + IA G A+ + + W
Sbjct: 168 KVFVFGEGANGENGFGATKKAIDIKRPRYNELLTKHEVVRIATGGMHVLALTKDNKILSW 227
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDY-----GRLGLKNVSEPVTEPTPIPSLQDK 423
G+ + LG +D ++ + D G + L+ +++ +P D
Sbjct: 228 GVNDSGALGRNTKDAVVPTRDLDADDSDSDSEDETGGLIDLEATPTAISDEYFLP---DT 284
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGM--GNGYQLGNGKEDDILE-PMKIEGKQLNNYTVL 480
T IA G+ SFAI +EG +YGWG N LG + D+ E P IEG
Sbjct: 285 TFVDIAAGDSCSFAITTEGAVYGWGTFRKNEGILGFKGKGDVAEYPQYIEGVT----KAT 340
Query: 481 QVASGGQHSVILAK 494
Q+A G H +L K
Sbjct: 341 QIACGTNHVFVLTK 354
>gi|239609087|gb|EEQ86074.1| ran exchange factor Prp20/Pim1 [Ajellomyces dermatitidis ER-3]
gi|327356425|gb|EGE85282.1| ran exchange factor Prp20/Pim1 [Ajellomyces dermatitidis ATCC
18188]
Length = 543
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 194/400 (48%), Gaps = 67/400 (16%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV++ GGMH V LT D K+ T
Sbjct: 119 VYVCGEGSSGELGLGAGKNVVDVKRPRLNPHLPADTVGVVQIATGGMHCVALTHDNKILT 178
Query: 93 WGCNDEGALGREAEGD--------------------------SEFIPQTV---NLPKKA- 122
WG ND+GALGR+ D E P V + P+
Sbjct: 179 WGVNDQGALGRDTTWDGGYKDIKEGDGSDSDSDSDSDSGLNPREATPGAVPSESFPEDTV 238
Query: 123 -VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASG 180
VQ++A DS S AL + G+VY WG+FR + G +G G+ +Q+TP+ L ++ I I G
Sbjct: 239 FVQVAASDSASFALTDVGSVYGWGTFRSNDGILGFDGKSTVQRTPVLLPTLKKIKYITCG 298
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
++H + L +G++ G +Q QLG RI +R+ ++ L+P E L K++ +
Sbjct: 299 SNHVLALNDKGSVFAWGSGQQNQLGRRIIERTK-------INGLQPREFGLP-KNMVGLG 350
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G ++F I G + A+GLN++ + G + + P +++SL+DK +
Sbjct: 351 CGADHSFAIHKSGKVYAWGLNSFGETGIREGAGDR--EAAILRPAVVESLTDKDIIQICG 408
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDK 344
G HHSLAL ++G+ AFGR D + G+K S P + PT IP D
Sbjct: 409 GSHHSLALTAKGECLAFGRLDGFQTGIKIDSLPDSSVIRDDRNKPRILANPTHIP---DI 465
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I G+ S AI +G + WG YQ G G ++DI
Sbjct: 466 DACHIGSGSEHSIAIGKDGRAWSWGFSANYQTGQGTDEDI 505
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 163/404 (40%), Gaps = 111/404 (27%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT---------------------QRS 211
G+V+IA+G H V LT +LT G +QG LGR T
Sbjct: 156 GVVQIATGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGYKDIKEGDGSDSDSDSDSD 215
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-----FISSKGSILAFGL--NNYSQL 264
+ N R PG VP + D VF V + ++ GS+ +G +N L
Sbjct: 216 SGLNPREAT----PGAVPSESFPEDTVFVQVAASDSASFALTDVGSVYGWGTFRSNDGIL 271
Query: 265 G-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G + S VQ+ TP L+ +L KK + G +H LALN +G ++A+G +L
Sbjct: 272 GFDGKSTVQR-------TPVLLPTL--KKIKYITCGSNHVLALNDKGSVFAWGSGQQNQL 322
Query: 324 GLKNVSEPVTEPTPIPSLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----G 373
G + + E T I LQ K + + CG SFAI G +Y WG+ + G
Sbjct: 323 GRR-----IIERTKINGLQPREFGLPKNMVGLGCGADHSFAIHKSGKVYAWGLNSFGETG 377
Query: 374 YQLGNGKED---------------DI------------LNSEGKIYAFGRHDYGRLGLKN 406
+ G G + DI L ++G+ AFGR D + G+K
Sbjct: 378 IREGAGDREAAILRPAVVESLTDKDIIQICGGSHHSLALTAKGECLAFGRLDGFQTGIKI 437
Query: 407 VSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
S P + PT IP D I G+ S AI +G + WG
Sbjct: 438 DSLPDSSVIRDDRNKPRILANPTHIP---DIDACHIGSGSEHSIAIGKDGRAWSWGFSAN 494
Query: 453 YQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
YQ G G ++DI +E + GK+LN +GGQ S+
Sbjct: 495 YQTGQGTDEDIEVASVVENTAVRGKRLN-----WADAGGQFSIF 533
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 89/233 (38%), Gaps = 63/233 (27%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVT------------- 333
+A+G H +AL + KI +G +D G LG K++ E
Sbjct: 159 QIATGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGYKDIKEGDGSDSDSDSDSDSGL 218
Query: 334 ---EPTP--IPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
E TP +PS +D +A + SFA+ G +YGWG
Sbjct: 219 NPREATPGAVPSESFPEDTVFVQVAASDSASFALTDVGSVYGWGTF-------------- 264
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
R + G LG S P +P+L K I I CG+ A++ +G ++
Sbjct: 265 ----------RSNDGILGFDGKSTVQRTPVLLPTL--KKIKYITCGSNHVLALNDKGSVF 312
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVILAK 494
WG G QLG I+E KI G Q + ++ + G HS + K
Sbjct: 313 AWGSGQQNQLGR----RIIERTKINGLQPREFGLPKNMVGLGCGADHSFAIHK 361
>gi|12001926|gb|AAG43106.1|AF049867_1 Prp20p [Candida albicans]
Length = 491
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 196/407 (48%), Gaps = 63/407 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 52 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 111
Query: 90 VYTWGCNDEGALGREAE----------------------------GDSEFIPQTV-NLPK 120
+++WG ND G LGR+ ++E P V NLP+
Sbjct: 112 IWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAESTPALVENLPE 171
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKI 177
+ VQ++A D+ S ALL +G VYAWG FR + G +G + I QKTPLK++ + IV++
Sbjct: 172 GEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKNIVQL 231
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHID 236
A+G DH + L S+G + G +Q QLGR I +R R+ LEP + L +I
Sbjct: 232 AAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIK 282
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ +G ++ F I ++ A+GLN Y Q + + P LI LS K
Sbjct: 283 YIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKE 342
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPSLQDKT- 345
+A+G+HH+LAL +G++YA+GR+D +G+ P + P+P+ +
Sbjct: 343 IAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKDQHGNPRSVPVPTKLEFAV 402
Query: 346 -ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
I +I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 403 KIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 449
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPI 338
TP L+++L + + LA+ + S AL S G +YA+G R + G LG E + TP+
Sbjct: 162 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLR-DEIKLQKTPL 220
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
+ K I +A G A+DS+G++Y WG G YQLG +
Sbjct: 221 KIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRSLEPQQFGLYN 280
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQDKTI 425
++ +YA+G + YG+ L + + +PT IP L K I
Sbjct: 281 IKYIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGI 340
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
IA G + A+ +G +Y WG + ++G K+
Sbjct: 341 KEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKD 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 111/278 (39%), Gaps = 61/278 (21%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQH 301
Y S+ + +G + +LG S K P+L + L K A G
Sbjct: 42 YAKAKSTPLDVFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGM 101
Query: 302 HSLALNSEGKIYAFGRHDYGRLG---------LKNVS-------------------EPVT 333
H+LAL+ + +I+++G +D G LG LK++ E +
Sbjct: 102 HTLALDGKNRIWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAES 161
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P + +L + I +A + +S A+ S G +Y WG
Sbjct: 162 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWG-----------------------C 198
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
F R + G LG E + TP+ + K I +A G A+DS+G++Y WG G Y
Sbjct: 199 F-RCNEGLLGFLR-DEIKLQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQY 256
Query: 454 QLGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQH 488
QLG ILE + +E +Q Y + +ASG H
Sbjct: 257 QLGR----RILERHRYRSLEPQQFGLYNIKYIASGDFH 290
>gi|3850148|emb|CAA21948.1| regulator of chromosome condensation [Candida albicans]
Length = 492
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 196/406 (48%), Gaps = 62/406 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 52 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 111
Query: 90 VYTWGCNDEGALGREAE---------------------------GDSEFIPQTV-NLPK- 120
+++WG ND G LGR+ ++E P V NLP+
Sbjct: 112 IWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDEDGDLNEAESTPALVENLPEG 171
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIA 178
+ VQ++A D+ S ALL +G VYAWG FR + G +G + I QKTPLK++ + IV++A
Sbjct: 172 EIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKNIVQLA 231
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+G DH + L S+G + G +Q QLGR I +R R+ LEP + L +I
Sbjct: 232 AGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIKY 282
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ +G ++ F I ++ A+GLN Y Q + + P LI LS K +
Sbjct: 283 IASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKEI 342
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPSLQDKT-- 345
A+G+HH+LAL +G++YA+GR+D +G+ P + P+P+ +
Sbjct: 343 AAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKDQHGNPRSVPVPTKLEFAVK 402
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
I +I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 403 IKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 448
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPI 338
TP L+++L + + LA+ + S AL S G +YA+G R + G LG E + TP+
Sbjct: 161 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLR-DEIKLQKTPL 219
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
+ K I +A G A+DS+G++Y WG G YQLG +
Sbjct: 220 KIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRSLEPQQFGLYN 279
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQDKTI 425
++ +YA+G + YG+ L + + +PT IP L K I
Sbjct: 280 IKYIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGI 339
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
IA G + A+ +G +Y WG + ++G K+
Sbjct: 340 KEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKD 374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 110/277 (39%), Gaps = 60/277 (21%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQH 301
Y S+ + +G + +LG S K P+L + L K A G
Sbjct: 42 YAKAKSTPLDVFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGM 101
Query: 302 HSLALNSEGKIYAFGRHDYGRLG---------LKNVS------------------EPVTE 334
H+LAL+ + +I+++G +D G LG LK++ E +
Sbjct: 102 HTLALDGKNRIWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDEDGDLNEAEST 161
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P + +L + I +A + +S A+ S G +Y WG
Sbjct: 162 PALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCF----------------------- 198
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
R + G LG E + TP+ + K I +A G A+DS+G++Y WG G YQ
Sbjct: 199 -RCNEGLLGFLR-DEIKLQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQ 256
Query: 455 LGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQH 488
LG ILE + +E +Q Y + +ASG H
Sbjct: 257 LGR----RILERHRYRSLEPQQFGLYNIKYIASGDFH 289
>gi|159488781|ref|XP_001702381.1| regulator of chromosome condensation [Chlamydomonas reinhardtii]
gi|158271175|gb|EDO97001.1| regulator of chromosome condensation [Chlamydomonas reinhardtii]
Length = 606
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 198/393 (50%), Gaps = 51/393 (12%)
Query: 48 GQLGLG-------PDV---MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
G LGLG PD + R + E L V+VV GGMH+V LT DG VYTWG ND
Sbjct: 110 GALGLGDPEGADDPDTRSQVPRPKLPISETL-KFVQVVCGGMHSVGLTADGDVYTWGVND 168
Query: 98 EGALGREAEG-----DSE------FIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAW 144
EGALGR+ G +SE F+P LP KAVQ++AGD + A+ DG++Y
Sbjct: 169 EGALGRKTSGTCWENESEKNKGDSFVPGQATLPGGLKAVQVAAGDGFTFAVGTDGSLYGC 228
Query: 145 GSFRDSHGSMG-----LKGEGIQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLLTAGC 198
G F+D G++ +K +G+ K ES+ I K+ GA H V+LT+RG++LT G
Sbjct: 229 GHFKDEVGALSGFTADVKVQGLFIQVWKPESLRDRIKKLVCGARHAVLLTNRGDVLTWGS 288
Query: 199 PEQGQLGRITQ-RSASRNARRGMSFLEPGEV-----PLKRKHIDDVFTGVYNTFISSK-G 251
QGQLGR+ S + +P V L DV G Y+TF+ K G
Sbjct: 289 GSQGQLGRVKPYHQDSEHQPTAEQLFKPTLVAHLPYALGSTQAVDVACGAYSTFVIGKNG 348
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ A+GLNN QLG A + + + + P + SL K +A G+ H+LAL +G
Sbjct: 349 AVAAWGLNNSGQLGIAK---ENNDDNLKWEPVPVASL--KGVAHIAGGEQHTLALTKKGV 403
Query: 312 IYAFGRHDYGRLGLKNV-----SEPVTEPTPIPSLQD-KTITSIACGNCVSFAIDSEGVL 365
+ +FG YG LG ++V +E EP P+ L + + IA G VS S+G
Sbjct: 404 LLSFGAATYGMLGRRDVDTNTANEIHPEPKPVDGLPEGAKVECIAAGTNVSACTTSDGDA 463
Query: 366 YGWGMGNGYQLGNGKEDD---ILNSEGKIYAFG 395
+ WG QL G ++D + G++ FG
Sbjct: 464 WFWGSNTNLQLAKGTDEDDETVPKKMGRVKQFG 496
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 160/393 (40%), Gaps = 61/393 (15%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN---AR 217
+ + L + V++ G H V LT+ G++ T G ++G LGR T + N
Sbjct: 129 VPRPKLPISETLKFVQVVCGGMHSVGLTADGDVYTWGVNDEGALGRKTSGTCWENESEKN 188
Query: 218 RGMSFLEPGE--VPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQK 273
+G SF+ PG+ +P K + + + + GS+ G + L ++V+
Sbjct: 189 KGDSFV-PGQATLPGGLKAVQVAAGDGFTFAVGTDGSLYGCGHFKDEVGALSGFTADVKV 247
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-------- 325
G F +SL D+ L G H++ L + G + +G G+LG
Sbjct: 248 QG--LFIQVWKPESLRDR-IKKLVCGARHAVLLTNRGDVLTWGSGSQGQLGRVKPYHQDS 304
Query: 326 --KNVSEPVTEPTPIP----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ +E + +PT + +L +ACG +F I G + WG+ N QLG
Sbjct: 305 EHQPTAEQLFKPTLVAHLPYALGSTQAVDVACGAYSTFVIGKNGAVAAWGLNNSGQLGIA 364
Query: 380 KEDD----------------------------ILNSEGKIYAFGRHDYGRLGLKNV---- 407
KE++ L +G + +FG YG LG ++V
Sbjct: 365 KENNDDNLKWEPVPVASLKGVAHIAGGEQHTLALTKKGVLLSFGAATYGMLGRRDVDTNT 424
Query: 408 -SEPVTEPTPIPSLQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDIL 464
+E EP P+ L + + IA G VS S+G + WG QL G EDD
Sbjct: 425 ANEIHPEPKPVDGLPEGAKVECIAAGTNVSACTTSDGDAWFWGSNTNLQLAKGTDEDDET 484
Query: 465 EPMKI-EGKQLNNYTVLQVASGGQHSVILAKPK 496
P K+ KQ V V GGQH +LA P+
Sbjct: 485 VPKKMGRVKQFGYRRVHFVDFGGQHGALLAGPQ 517
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 34 TGGGVVLTCGQGDTGQLG------------------LGPDVMERKTFALVEDLDNVVEVV 75
T G VLT G G GQLG P ++ +AL V+V
Sbjct: 278 TNRGDVLTWGSGSQGQLGRVKPYHQDSEHQPTAEQLFKPTLVAHLPYALGS--TQAVDVA 335
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHS 132
G T + ++G V WG N+ G LG E + + + P V K I+ G+ H+
Sbjct: 336 CGAYSTFVIGKNGAVAAWGLNNSGQLGIAKENNDDNLKWEPVPVASLKGVAHIAGGEQHT 395
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLK 157
+AL + G + ++G+ ++G +G +
Sbjct: 396 LALTKKGVLLSFGAA--TYGMLGRR 418
>gi|238883419|gb|EEQ47057.1| regulator of chromosome condensation [Candida albicans WO-1]
Length = 493
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 196/407 (48%), Gaps = 63/407 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 52 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 111
Query: 90 VYTWGCNDEGALGREAE----------------------------GDSEFIPQTV-NLPK 120
+++WG ND G LGR+ ++E P V NLP+
Sbjct: 112 IWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAESTPALVENLPE 171
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKI 177
+ VQ++A D+ S ALL +G VYAWG FR + G +G + I QKTPLK++ + IV++
Sbjct: 172 GEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKNIVQL 231
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHID 236
A+G DH + L S+G + G +Q QLGR I +R R+ LEP + L +I
Sbjct: 232 AAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIK 282
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ +G ++ F I ++ A+GLN Y Q + + P LI LS K
Sbjct: 283 YIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKE 342
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPSLQDKT- 345
+A+G+HH+LAL +G++YA+GR+D +G+ P + P+P+ +
Sbjct: 343 IAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKDQHGNPRSVPVPTKLEFAV 402
Query: 346 -ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
I +I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 403 KIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 449
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPI 338
TP L+++L + + LA+ + S AL S G +YA+G R + G LG E + TP+
Sbjct: 162 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLR-DEIKLQKTPL 220
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
+ K I +A G A+DS+G++Y WG G YQLG +
Sbjct: 221 KIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRSLEPQQFGLYN 280
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQDKTI 425
++ +YA+G + YG+ L + + +PT IP L K I
Sbjct: 281 IKYIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGI 340
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
IA G + A+ +G +Y WG + ++G K+
Sbjct: 341 KEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKD 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 110/278 (39%), Gaps = 61/278 (21%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQH 301
Y S+ + +G + +LG S K P+L + L K A G
Sbjct: 42 YAKAKSTPLDVFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGM 101
Query: 302 HSLALNSEGKIYAFGRHDYGRLG---------LKNVS-------------------EPVT 333
H+LAL+ + +I+++G +D G LG LK++ E +
Sbjct: 102 HTLALDGKNRIWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAES 161
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P + +L + I +A + +S A+ S G +Y WG
Sbjct: 162 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCF---------------------- 199
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
R + G LG E + TP+ + K I +A G A+DS+G++Y WG G Y
Sbjct: 200 --RCNEGLLGFLR-DEIKLQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQY 256
Query: 454 QLGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQH 488
QLG ILE + +E +Q Y + +ASG H
Sbjct: 257 QLGR----RILERHRYRSLEPQQFGLYNIKYIASGDFH 290
>gi|344231377|gb|EGV63259.1| hypothetical protein CANTEDRAFT_123263 [Candida tenuis ATCC 10573]
Length = 497
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 203/404 (50%), Gaps = 59/404 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVED--LDNVVEVVVGGMHTVCLTEDGKV 90
+ G G +LGLGP ++ L+ED +V+ VGGMHT+ L + ++
Sbjct: 57 IFVWGTGSMCELGLGPSAKNKEVKRPRLNPLLLEDHIKGKIVDFAVGGMHTLALDNNNQI 116
Query: 91 YTWGCNDEGALGREAE----------------------GDSEFIPQTV-NLPK--KAVQI 125
++WG ND G LGR+ ++E P V NLPK + VQ+
Sbjct: 117 WSWGGNDSGVLGRDTSKVKEQLKDMDAAESDEDDDGDLNEAESTPGLVENLPKNKRIVQL 176
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADH 183
A D+ S LL+ G VYAWG FR++ G +G + I Q+ PLK++ + IV++A+G DH
Sbjct: 177 CATDNLSAVLLDTGEVYAWGCFRNNEGLLGFLRDEIKLQRVPLKMDQLKNIVQLAAGKDH 236
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L S+G + G +Q QLGR R R+ + LEP + L +I + +G +
Sbjct: 237 ILALDSKGIVYAWGNGQQFQLGR---RILERHRYKA---LEPQQFGLY--NIKYIASGDF 288
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ F I ++ A+GLN + Q +S + + P LI+ LS K+ T + G+HH
Sbjct: 289 HCFAIDHDDNVYAWGLNQFGQCALTNSHGELEDGSLITRPTLIQPLSQKEITEIVGGEHH 348
Query: 303 SLALNSEGKIYAFGRHDYGRLGL--KNVSEPV-------TEPTPIPS------LQDKTIT 347
++AL G+++++GR+D +G+ KN+ + V P+P+ +D
Sbjct: 349 TMALTKGGEVFSWGRYDMKEVGIPEKNLPDSVFKDQHGKVRAVPVPTKLQLSAKEDIKCK 408
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+I G+ SFA+ ++G +Y WG G+ Y G G D+ + +I
Sbjct: 409 AIGTGSHHSFAVTTDGFVYSWGFGDTYGPGLGPLDEDVEKPTRI 452
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 55/262 (20%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG S K P L++ K A G H+LAL++ +I
Sbjct: 57 IFVWGTGSMCELGLGPSAKNKEVKRPRLNPLLLEDHIKGKIVDFAVGGMHTLALDNNNQI 116
Query: 313 YAFGRHDYGRLG---------LKN-------------VSEPVTEPTPIPSL-QDKTITSI 349
+++G +D G LG LK+ ++E + P + +L ++K I +
Sbjct: 117 WSWGGNDSGVLGRDTSKVKEQLKDMDAAESDEDDDGDLNEAESTPGLVENLPKNKRIVQL 176
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+ +S + G +Y WG N+EG + F R E
Sbjct: 177 CATDNLSAVLLDTGEVYAWGC-------------FRNNEG-LLGFLR-----------DE 211
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK- 468
+ P+ Q K I +A G A+DS+G++Y WG G +QLG ILE +
Sbjct: 212 IKLQRVPLKMDQLKNIVQLAAGKDHILALDSKGIVYAWGNGQQFQLGR----RILERHRY 267
Query: 469 --IEGKQLNNYTVLQVASGGQH 488
+E +Q Y + +ASG H
Sbjct: 268 KALEPQQFGLYNIKYIASGDFH 289
>gi|241957479|ref|XP_002421459.1| nucleocytoplasmic trafficking regulator of macromolecules,
putative; nucleotide exchange factor, putative;
pheromone response pathway component, putative;
regulator of chromosome condensation, putative [Candida
dubliniensis CD36]
gi|223644803|emb|CAX40795.1| nucleocytoplasmic trafficking regulator of macromolecules, putative
[Candida dubliniensis CD36]
Length = 491
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 194/405 (47%), Gaps = 61/405 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDL---DNVVEVVVGGMHTVCLTEDGK 89
+ G G +LGLGP ++ L ED +V+ VGGMHT+ L +
Sbjct: 52 IFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEDKLGGTKIVDFAVGGMHTLALDGKNR 111
Query: 90 VYTWGCNDEGALGREAE--------------------------GDSEFIPQTV-NLPK-K 121
+++WG ND G LGR+ ++E P V NLP+ +
Sbjct: 112 IWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGDDDDDDDEDGDLNEAESTPALVENLPEGE 171
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIAS 179
VQ++A D+ S AL +G VYAWG FR + G +G + I QKTPLK+ + IV++A+
Sbjct: 172 IVQLAATDNLSAALFANGDVYAWGCFRCNEGLLGFLRDEIKLQKTPLKINELKNIVQLAA 231
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L S+G + G +Q QLGR I +R R+ LEP + L +I +
Sbjct: 232 GKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIKYI 282
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G ++ F I ++ A+GLN Y Q + + P LI LS K +A
Sbjct: 283 ASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSRKGIKEIA 342
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPSLQDKT--I 346
+G+HH+LAL +G++YA+GR+D +G+ P + P+P+ D I
Sbjct: 343 AGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKDQHGKPRSVPVPTKLDFAVKI 402
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 403 KTIGVGSHHSFAVTVDGVVYAWGFSETYGPGLGPSIDDVEKPTRI 447
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 56/283 (19%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK------------------- 273
K +D G++ + K I ++G N+ LG S+ ++
Sbjct: 92 KIVDFAVGGMHTLALDGKNRIWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGDDDDDDDED 151
Query: 274 -SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSE 330
N TP L+++L + + LA+ + S AL + G +YA+G R + G LG E
Sbjct: 152 GDLNEAESTPALVENLPEGEIVQLAATDNLSAALFANGDVYAWGCFRCNEGLLGFLR-DE 210
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
+ TP+ + K I +A G A+DS+G++Y WG G YQLG +
Sbjct: 211 IKLQKTPLKINELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRSLE 270
Query: 384 --------------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPI 417
++ +YA+G + YG+ L + + +PT I
Sbjct: 271 PQQFGLYNIKYIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLI 330
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
P L K I IA G + A+ +G +Y WG + ++G K+
Sbjct: 331 PELSRKGIKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKD 373
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 59/266 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLALNSEGK 311
I +G + +LG S K P+L + L K A G H+LAL+ + +
Sbjct: 52 IFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEDKLGGTKIVDFAVGGMHTLALDGKNR 111
Query: 312 IYAFGRHDYGRLGLKN--------------------------VSEPVTEPTPIPSLQDKT 345
I+++G +D G LG ++E + P + +L +
Sbjct: 112 IWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGDDDDDDDEDGDLNEAESTPALVENLPEGE 171
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
I +A + +S A+ + G +Y WG R + G LG
Sbjct: 172 IVQLAATDNLSAALFANGDVYAWGCF------------------------RCNEGLLGFL 207
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
E + TP+ + K I +A G A+DS+G++Y WG G YQLG ILE
Sbjct: 208 R-DEIKLQKTPLKINELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGR----RILE 262
Query: 466 PMK---IEGKQLNNYTVLQVASGGQH 488
+ +E +Q Y + +ASG H
Sbjct: 263 RHRYRSLEPQQFGLYNIKYIASGDFH 288
>gi|77022888|ref|XP_888888.1| hypothetical protein CaO19_5184 [Candida albicans SC5314]
gi|76573701|dbj|BAE44785.1| hypothetical protein [Candida albicans]
Length = 493
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 196/407 (48%), Gaps = 63/407 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 52 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 111
Query: 90 VYTWGCNDEGALGREAE----------------------------GDSEFIPQTV-NLPK 120
+++WG ND G LGR+ ++E P V NLP+
Sbjct: 112 IWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAESTPALVENLPE 171
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKI 177
+ VQ++A D+ S ALL +G VYAWG FR + G +G + I QKTPLK++ + IV++
Sbjct: 172 GEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKNIVQL 231
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHID 236
A+G DH + L S+G + G +Q QLGR I +R R+ LEP + L +I
Sbjct: 232 AAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIK 282
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ +G ++ F I ++ A+GLN Y Q + + P LI LS K
Sbjct: 283 YIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKE 342
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPSLQDKT- 345
+A+G+HH+LAL +G++YA+GR+D +G+ P + P+P+ +
Sbjct: 343 IAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKDQHGNPRSVPVPTKLEFAV 402
Query: 346 -ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
I +I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 403 KIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 449
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPI 338
TP L+++L + + LA+ + S AL S G +YA+G R + G LG E + TP+
Sbjct: 162 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLR-DEIKLQKTPL 220
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
+ K I +A G A+DS+G++Y WG G YQLG +
Sbjct: 221 KIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRYRSLEPQQFGLYN 280
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQDKTI 425
++ +YA+G + YG+ L + + +PT IP L K I
Sbjct: 281 IKYIASGDFHCFAIDHSDNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGI 340
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
IA G + A+ +G +Y WG + ++G K+
Sbjct: 341 KEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKD 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 110/278 (39%), Gaps = 61/278 (21%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQH 301
Y S+ + +G + +LG S K P+L + L K A G
Sbjct: 42 YAKAKSTPLDVFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGM 101
Query: 302 HSLALNSEGKIYAFGRHDYGRLG---------LKNVS-------------------EPVT 333
H+LAL+ + +I+++G +D G LG LK++ E +
Sbjct: 102 HTLALDGKNRIWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAES 161
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P + +L + I +A + +S A+ S G +Y WG
Sbjct: 162 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYAWGCF---------------------- 199
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
R + G LG E + TP+ + K I +A G A+DS+G++Y WG G Y
Sbjct: 200 --RCNEGLLGFLR-DEIKLQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQY 256
Query: 454 QLGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQH 488
QLG ILE + +E +Q Y + +ASG H
Sbjct: 257 QLGR----RILERHRYRSLEPQQFGLYNIKYIASGDFH 290
>gi|302417714|ref|XP_003006688.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
gi|261354290|gb|EEY16718.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
Length = 533
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 196/424 (46%), Gaps = 72/424 (16%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMER---KTFALVEDLD---- 69
S K F PT C VL G GD G+LGLGP+ E + + +D
Sbjct: 91 STKTFGALNQAPTEIC-----TVLIFGNGDNGELGLGPNKTESLRPRKNPFLNPVDSSKF 145
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-------------------- 109
+VV++ GGMHTV LT D K+ TWG ND ALGR+ D
Sbjct: 146 HVVQIACGGMHTVALTADNKIITWGVNDNCALGRDTAWDEKLRDMDAESGEEEEGGLNPL 205
Query: 110 EFIPQTV---NLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHGS--MGLKGEG-- 160
E P V +LP VQ++AGDS S AL E G VY WG+FRDS G G + +G
Sbjct: 206 ESTPTQVASRHLPADTVFVQVAAGDSCSFALTETGLVYGWGTFRDSKGDERFGYEADGKM 265
Query: 161 --IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
Q P + V I ++A G DH + L + GN+ G EQ QLGR R R
Sbjct: 266 ITKQDKPALIRGVQNITQLACGVDHVLALDASGNIWGWGNNEQNQLGR-------RLFGR 318
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
L P ++ + R + + +G Y++F I K ++ ++GLN++ + G+ D+ S
Sbjct: 319 DQDSLIPHQIRVCRNNAKYIASGEYHSFAIDKKDNVWSWGLNSFGEAGDPDTAGTNSAVL 378
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--- 334
+ P I++L+ K T + G HHS A+ G+ + +GR D G+LG E + +
Sbjct: 379 PY--PMKIRTLAGKGITCIDGGAHHSAAVTPNGECFVWGRMDGGQLGFTFTPEQLQDAAQ 436
Query: 335 --------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
P +P + ++ +ACG + I +G Y G G+ QLG
Sbjct: 437 VRFDERNKPAICLRPAAVPHV--GLVSHVACGTDHTIFITKDGDAYATGFGSQGQLGLNS 494
Query: 381 EDDI 384
E+D+
Sbjct: 495 EEDV 498
>gi|396490912|ref|XP_003843447.1| hypothetical protein LEMA_P075570.1 [Leptosphaeria maculans JN3]
gi|312220026|emb|CBX99968.1| hypothetical protein LEMA_P075570.1 [Leptosphaeria maculans JN3]
Length = 606
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 183/400 (45%), Gaps = 77/400 (19%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G+G +G+LGLG DV + + +L NVV V GGMH V LT+D K+ TW
Sbjct: 198 VFVFGEGSSGELGLGATKKAIDVKRPRYNEPLSNL-NVVRVAAGGMHVVALTKDNKILTW 256
Query: 94 GCNDEGALGREAE-------------------------GDSEFIPQTV---NLPKKA--V 123
G ND GALGR+ D E P V + P+ V
Sbjct: 257 GVNDNGALGRDTSNADVKMRDLDADDSDSDSEDESGGLNDLESTPTAVSDEHFPEDTVFV 316
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGAD 182
I+AGDS S AL +G VY WG+FR + G +G +G + P+ +ES+ + +IA G +
Sbjct: 317 DIAAGDSCSFALTTEGAVYGWGTFRKNEGILGFERGNHTARFPVYIESMKKVTQIACGTN 376
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H L + G P + FL+ V + I + +G
Sbjct: 377 HVYALDKDQRVYAWGSPTEPHW-----------------FLD-ATVKRHSQKIVSIASGD 418
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
Y+ I+ G I A+G NNY + G D+ + + TP +I SL K LA G H
Sbjct: 419 YHGLAIAEDGHIWAWGANNYCETGFPDN--AGADDASLLTPRIIHSLEGKDVASLAGGAH 476
Query: 302 HSLALNSEGKIYAFGRHDYGRLG---------------LKNVSEP--VTEPTPIPSLQDK 344
H++A+ +G++ +GR D + G LKN +P + EPTPIP+L+D
Sbjct: 477 HNIAITKDGQVLVWGRCDGSQTGIPADVLAAEEDPDKVLKNNGKPKILVEPTPIPNLKD- 535
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I + +CG + ID G Y WG YQ G G +DD+
Sbjct: 536 -IVAGSCGPDHTIVIDKNGKAYAWGFSANYQTGLGTDDDV 574
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 190/448 (42%), Gaps = 86/448 (19%)
Query: 118 LPKKAVQISAGDS--HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSG- 173
LPK + G + +++ E V+ +G +G + I K P E +S
Sbjct: 173 LPKGPRRTKKGKTEINAIRYTEPLKVFVFGEGSSGELGLGATKKAIDVKRPRYNEPLSNL 232
Query: 174 -IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR--------------NARR 218
+V++A+G H V LT +LT G + G LGR T + + +
Sbjct: 233 NVVRVAAGGMHVVALTKDNKILTWGVNDNGALGRDTSNADVKMRDLDADDSDSDSEDESG 292
Query: 219 GMSFLEPGEVPLKRKHI--DDVFTGV------------------YNTFISSKGSILAFGL 258
G++ LE + +H D VF + + TF ++G IL F
Sbjct: 293 GLNDLESTPTAVSDEHFPEDTVFVDIAAGDSCSFALTTEGAVYGWGTFRKNEG-ILGFER 351
Query: 259 NNYS--------------QLG---------EADSEVQKSGNTC---FFTPHLIKSLSDKK 292
N++ Q+ + D V G+ +F +K S +K
Sbjct: 352 GNHTARFPVYIESMKKVTQIACGTNHVYALDKDQRVYAWGSPTEPHWFLDATVKRHS-QK 410
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITS 348
+ASG +H LA+ +G I+A+G ++Y G + + + P I SL+ K + S
Sbjct: 411 IVSIASGDYHGLAIAEDGHIWAWGANNYCETGFPDNAGADDASLLTPRIIHSLEGKDVAS 470
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G + AI +G + WG +G Q G D+L +E D ++ LKN
Sbjct: 471 LAGGAHHNIAITKDGQVLVWGRCDGSQ--TGIPADVLAAE--------EDPDKV-LKNNG 519
Query: 409 EP--VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+P + EPTPIP+L+D I + +CG + ID G Y WG YQ G G +DD+ P
Sbjct: 520 KPKILVEPTPIPNLKD--IVAGSCGPDHTIVIDKNGKAYAWGFSANYQTGLGTDDDVDVP 577
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
I+ + + V GGQ+S++ +K
Sbjct: 578 TLIDNTATRDEKLTWVGCGGQYSILASK 605
>gi|345563579|gb|EGX46567.1| hypothetical protein AOL_s00097g637 [Arthrobotrys oligospora ATCC
24927]
Length = 588
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 200/407 (49%), Gaps = 76/407 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+GD +LGLGPD R L D VV+V VGGMHT LT DGK+ T
Sbjct: 147 IFVFGKGDMCELGLGPDAKARTVTRPRLNPFLPTDTVGVVQVAVGGMHTAVLTHDGKILT 206
Query: 93 WGCNDEGALGREAE-----------------------------------GDSEFIPQTVN 117
WG ND+ ALGR G E +P VN
Sbjct: 207 WGVNDQNALGRNTSWEAPEVDIDRADADNSDSDDDDDDDAQINPLESTPGPVEGLPDEVN 266
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVK 176
+ V I+ DS ++A+ + G VYAWG+FR S G +G + + I P L ++ IV
Sbjct: 267 I----VSIACSDSLTLAITDTGFVYAWGTFRCSDGILGFSEDQRIAIHPFLLPNLKNIVD 322
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHI 235
I++G DH + L+S G + G +Q QLGR + +R+ M+ L P E LK+ I
Sbjct: 323 ISAGVDHILALSSTGTVFAWGNGQQYQLGRRVIERTR-------MNGLVPREFGLKK--I 373
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKF 293
V G Y++F + + G + A+GLN Y Q G + + + + G P ++KSL+ K
Sbjct: 374 VAVGAGSYHSFAVDASGKVWAWGLNQYGQCGIDLEGKTGEDG-VAVPKPTIVKSLAKYKI 432
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS------------EP--VTEPTPIP 339
+ G+HHS A+ +GK+ +GR D +LG+K +P +TEPT +P
Sbjct: 433 VQITGGEHHSAAVTDDGKLLTWGRLDANQLGIKAEDLKSEYTVYDEHGKPRFITEPTVVP 492
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDIL 385
+L +I+ +ACG + AID G + WG G +Q+G G +DIL
Sbjct: 493 NL--PSISKVACGTHHNIAIDVYGKAHSWGFGENFQVGQGPAGEDIL 537
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
K+I D+ GV + +SS G++ A+G QLG E + + + K
Sbjct: 318 KNIVDISAGVDHILALSSTGTVFAWGNGQQYQLGRRVIERTRMNGL------VPREFGLK 371
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE------PVTEPTPIPSLQDKT 345
K + +G +HS A+++ GK++A+G + YG+ G+ + V +PT + SL
Sbjct: 372 KIVAVGAGSYHSFAVDASGKVWAWGLNQYGQCGIDLEGKTGEDGVAVPKPTIVKSLAKYK 431
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
I I G S A+ +G L WG + QLG ED L SE +Y H R
Sbjct: 432 IVQITGGEHHSAAVTDDGKLLTWGRLDANQLGIKAED--LKSEYTVY--DEHGKPRF--- 484
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDIL 464
+TEPT +P+L +I+ +ACG + AID G + WG G +Q+G G +DIL
Sbjct: 485 -----ITEPTVVPNL--PSISKVACGTHHNIAIDVYGKAHSWGFGENFQVGQGPAGEDIL 537
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
P I+ N ++ GGQ SV+ +P
Sbjct: 538 IPTLIDNTATRNERLIFAGCGGQFSVMAGQP 568
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQIS 126
N+V + T+ +T+ G VY WG C+D G LG + P + K V IS
Sbjct: 266 NIVSIACSDSLTLAITDTGFVYAWGTFRCSD-GILGFSEDQRIAIHPFLLPNLKNIVDIS 324
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL-----KLESVSGIVKIASGA 181
AG H +AL GTV+AWG+ + L I++T + + + IV + +G+
Sbjct: 325 AGVDHILALSSTGTVFAWGNGQQYQ----LGRRVIERTRMNGLVPREFGLKKIVAVGAGS 380
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFT 240
H + + G + G + GQ G + + G++ +P V L + I +
Sbjct: 381 YHSFAVDASGKVWAWGLNQYGQCGIDLE---GKTGEDGVAVPKPTIVKSLAKYKIVQITG 437
Query: 241 GVYNT-FISSKGSILAFGLNNYSQLGEADSEVQ-------KSGNTCFFT-PHLIKSLSDK 291
G +++ ++ G +L +G + +QLG +++ + G F T P ++ +L
Sbjct: 438 GEHHSAAVTDDGKLLTWGRLDANQLGIKAEDLKSEYTVYDEHGKPRFITEPTVVPNLP-- 495
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+ +A G HH++A++ GK +++G + ++G P E IP+L D T T
Sbjct: 496 SISKVACGTHHNIAIDVYGKAHSWGFGENFQVG----QGPAGEDILIPTLIDNTAT 547
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMER-KTFALVED---LDNVVEVVVGGMHTVCLTEDGKVYT 92
G V G G QLG V+ER + LV L +V V G H+ + GKV+
Sbjct: 337 GTVFAWGNGQQYQLGR--RVIERTRMNGLVPREFGLKKIVAVGAGSYHSFAVDASGKVWA 394
Query: 93 WGCNDEGALGREAEG----DSEFIPQTV---NLPK-KAVQISAGDSHSVALLEDGTVYAW 144
WG N G G + EG D +P+ +L K K VQI+ G+ HS A+ +DG + W
Sbjct: 395 WGLNQYGQCGIDLEGKTGEDGVAVPKPTIVKSLAKYKIVQITGGEHHSAAVTDDGKLLTW 454
Query: 145 GSFRDSHGSMGLKGEGIQK---------------TPLKLESVSGIVKIASGADHFVMLTS 189
G R +G+K E ++ P + ++ I K+A G H + +
Sbjct: 455 G--RLDANQLGIKAEDLKSEYTVYDEHGKPRFITEPTVVPNLPSISKVACGTHHNIAIDV 512
Query: 190 RGNLLTAGCPEQGQLGR-----------ITQRSASRNAR 217
G + G E Q+G+ + +A+RN R
Sbjct: 513 YGKAHSWGFGENFQVGQGPAGEDILIPTLIDNTATRNER 551
>gi|448536004|ref|XP_003871048.1| Srm1 protein [Candida orthopsilosis Co 90-125]
gi|380355404|emb|CCG24923.1| Srm1 protein [Candida orthopsilosis]
Length = 494
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 199/417 (47%), Gaps = 61/417 (14%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT-------FALVEDLDN--VVEVVV 76
A+P++K G + G G +LGLGP ++ + E L N +V+ V
Sbjct: 43 AMPSVK--KIGLDIFVWGTGSMCELGLGPAANTKEVKRPRLNPYLTEEKLGNTKIVDFAV 100
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGRE-------------AEGDSE-----------FI 112
GGMHT+ L ++++WG ND G LGR+ AE D E +
Sbjct: 101 GGMHTLALDGKNRIWSWGNNDSGVLGRDTSHSKEVLKDVDAAESDDEDGDLNEAEATPAL 160
Query: 113 PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGE-GIQKTPLKLES 170
Q + + VQ+ A D+ S AL +G VYAWG FR + G +G L+ E IQ+TPLK+
Sbjct: 161 VQGLENENEIVQLVATDNLSAALFSNGDVYAWGCFRCNEGLLGFLRDEIKIQRTPLKISE 220
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+ IV++A G DH + L S+G + G +Q QLGR R R+ R LEP + L
Sbjct: 221 LKNIVQLAGGKDHVLALDSKGIVFAWGNGQQYQLGR---RILDRHRLRS---LEPQQFGL 274
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+I V +G Y+ F I + A+GLN + Q S + + P LI LS
Sbjct: 275 Y--NIKYVASGDYHCFAIDHNDQVYAWGLNQFGQCAFTGSHGELEDGSVLMKPTLIPELS 332
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-------EPTPIPS-- 340
+ +A+G+HH+LAL +GK+ A+GR+D +G+ P + +P IP+
Sbjct: 333 NLGIKQIAAGEHHTLALTGDGKVLAWGRYDMKEVGIPEEELPKSTFKDQHGKPRAIPTPT 392
Query: 341 ------LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
D I +I G+ SFA+ +G +Y WG Y G G DD + +I
Sbjct: 393 QLKFGNAADMKIKAIGVGSHHSFAVTEDGFVYSWGFSETYAPGLGNLDDDVEKPTRI 449
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 126/312 (40%), Gaps = 63/312 (20%)
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG---SILAFGLNNYS 262
+I ++S++ +R SF V + D+ N S K I +G +
Sbjct: 9 KIEEQSSNGTHKRSKSFTTSSFVLHSYSKLPDI-----NAMPSVKKIGLDIFVWGTGSMC 63
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
+LG + K P+L + L + K A G H+LAL+ + +I+++G +D G
Sbjct: 64 ELGLGPAANTKEVKRPRLNPYLTEEKLGNTKIVDFAVGGMHTLALDGKNRIWSWGNNDSG 123
Query: 322 RLG---------LKNV------------SEPVTEPTPIPSLQDKT-ITSIACGNCVSFAI 359
LG LK+V +E P + L+++ I + + +S A+
Sbjct: 124 VLGRDTSHSKEVLKDVDAAESDDEDGDLNEAEATPALVQGLENENEIVQLVATDNLSAAL 183
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
S G +Y WG R + G LG E + TP+
Sbjct: 184 FSNGDVYAWGCF------------------------RCNEGLLGFLR-DEIKIQRTPLKI 218
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK---IEGKQLNN 476
+ K I +A G A+DS+G+++ WG G YQLG IL+ + +E +Q
Sbjct: 219 SELKNIVQLAGGKDHVLALDSKGIVFAWGNGQQYQLGR----RILDRHRLRSLEPQQFGL 274
Query: 477 YTVLQVASGGQH 488
Y + VASG H
Sbjct: 275 YNIKYVASGDYH 286
>gi|70982263|ref|XP_746660.1| Ran exchange factor Prp20/Pim1 [Aspergillus fumigatus Af293]
gi|66844283|gb|EAL84622.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus fumigatus
Af293]
gi|159122104|gb|EDP47226.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus fumigatus
A1163]
Length = 544
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 194/405 (47%), Gaps = 76/405 (18%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V CG+G +G+LGLG DV R L D VV+V VGGMH V LT D K+ T
Sbjct: 123 VYVCGEGSSGELGLGTAKNAVDVKRPRLNPHLPADRVGVVQVAVGGMHCVALTYDNKILT 182
Query: 93 WGCNDEGALGRE-------------------------------------AEGDSEFIPQT 115
WG ND+GALGR+ A F P+T
Sbjct: 183 WGVNDQGALGRDTTWEGGYKDIDDNKSDADSDSDSDDDSGLNPYEATPTAISSDAFPPET 242
Query: 116 VNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSGI 174
V V+++AGDS S AL +DG VY WG+FR + G +G G +Q TP + S+ I
Sbjct: 243 V-----FVEVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFDVGHKVQPTPTLIPSLKKI 297
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+A G +H + L +G + + G +Q QLGR R RN G L+P E L K+
Sbjct: 298 KHLACGDNHVLALDEKGAVFSWGSGQQNQLGR---RIIERNRLNG---LQPREFGLP-KN 350
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I V G +++F + + G + A+GLN++ + G E P ++ SLS K
Sbjct: 351 IVHVSCGAFHSFAVDATGKVYAWGLNSFGETGI--REGAGDDEAAIIHPTVVDSLSGKNI 408
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIP 339
L G HHSLA++ +G+ +GR D + GLK + P + EPTP+P
Sbjct: 409 VQLCGGAHHSLAVSKDGQCLVWGRLDGFQTGLKVDTLPDDAVVKDERGRPRILIEPTPLP 468
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ + +A G+ S AID +G + WG YQ G G +DDI
Sbjct: 469 GIK---ASVVAAGSDHSIAIDVDGRAWSWGFSATYQTGQGTQDDI 510
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 71/267 (26%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
TP LI SL KK LA G +H LAL+ +G ++++G +LG + + E +
Sbjct: 287 TPTLIPSL--KKIKHLACGDNHVLALDEKGAVFSWGSGQQNQLGRR-----IIERNRLNG 339
Query: 341 LQD------KTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLGNGKEDDIL----- 385
LQ K I ++CG SFA+D+ G +Y WG+ + G + G G ++ +
Sbjct: 340 LQPREFGLPKNIVHVSCGAFHSFAVDATGKVYAWGLNSFGETGIREGAGDDEAAIIHPTV 399
Query: 386 ----------------------NSEGKIYAFGRHDYGRLGLKNVSEP------------- 410
+ +G+ +GR D + GLK + P
Sbjct: 400 VDSLSGKNIVQLCGGAHHSLAVSKDGQCLVWGRLDGFQTGLKVDTLPDDAVVKDERGRPR 459
Query: 411 -VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-----L 464
+ EPTP+P ++ + +A G+ S AID +G + WG YQ G G +DDI +
Sbjct: 460 ILIEPTPLPGIK---ASVVAAGSDHSIAIDVDGRAWSWGFSATYQTGQGTQDDIEVATVV 516
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVI 491
E + GK+LN +GGQ SV
Sbjct: 517 ENTAVRGKKLN-----WAGAGGQFSVF 538
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 84/225 (37%), Gaps = 64/225 (28%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSE--------------------------PV-TE 334
H +AL + KI +G +D G LG E P
Sbjct: 170 HCVALTYDNKILTWGVNDQGALGRDTTWEGGYKDIDDNKSDADSDSDSDDDSGLNPYEAT 229
Query: 335 PTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
PT I S + +A G+ SFA+ +G +YGWG
Sbjct: 230 PTAISSDAFPPETVFVEVAAGDSSSFALTDDGQVYGWGTF-------------------- 269
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
R + G LG + PT IPSL K I +ACG+ A+D +G ++ WG G
Sbjct: 270 ----RSNDGILGFDVGHKVQPTPTLIPSL--KKIKHLACGDNHVLALDEKGAVFSWGSGQ 323
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVIL 492
QLG I+E ++ G Q + ++ V+ G HS +
Sbjct: 324 QNQLGR----RIIERNRLNGLQPREFGLPKNIVHVSCGAFHSFAV 364
>gi|320583511|gb|EFW97724.1| Nucleotide exchange factor for Gsp1p [Ogataea parapolymorpha DL-1]
Length = 491
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 199/412 (48%), Gaps = 69/412 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
V G G +LGLGP ++ F E++ +V++ VGGMHT+ L +V+
Sbjct: 59 VFVWGSGSMCELGLGPAASTKEVKRPRLNPFLKKEEV-GIVDLAVGGMHTLALDHRNQVW 117
Query: 92 TWGCNDEGALGREAEGDS---------------------EFIPQTVN-LPK--KAVQISA 127
+WG ND G LGR+ E P V LPK K VQ++A
Sbjct: 118 SWGGNDSGVLGRDTAKSGAEQLKDADADSEDEDGELNPLESTPAVVEGLPKDKKIVQLAA 177
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHFVM 186
D+ S AL E G VYAWG+FR + G +G K IQ++P+K+ IV++A+G DH +
Sbjct: 178 TDNLSAALYETGEVYAWGTFRCNEGILGFNKDVKIQRSPVKIPDFENIVQLAAGKDHLLG 237
Query: 187 LTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
L ++G + G +Q QLGR I +R+ M+ LEP LK ++ + +G +++
Sbjct: 238 LDTKGVVYAWGNGQQYQLGRKILERTR-------MTSLEPRSFGLK--NVKAIGSGEFHS 288
Query: 246 F-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
F I++ G +L++GLN Y Q G V P I+ L+ K + G+HHSL
Sbjct: 289 FAITTDGKVLSWGLNQYGQCG---IHVDIEDGAVVSKPTEIEELTGKDIVYVTGGEHHSL 345
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEP-----------------VTEPTPIPSLQDKTIT 347
AL+S G +Y FGR D +G++ P T+ T +P +
Sbjct: 346 ALSSSGDVYTFGRFDMKEIGIEKEKLPKDGVITDEHGNVRSLPVATKLTTLPKCK----- 400
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
++A G+ S A+ +G+ + WG + Y LG G D+ + + +I D+
Sbjct: 401 AVAAGSHHSIAVTEDGIAFSWGFADTYALGLGNLDEDVATPTRINNTATRDH 452
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 173/432 (40%), Gaps = 107/432 (24%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQ------KTP-----LKLESVSGIVKIASGADHFVMLTS 189
V+ WGS GSM G G K P LK E V GIV +A G H + L
Sbjct: 59 VFVWGS-----GSMCELGLGPAASTKEVKRPRLNPFLKKEEV-GIVDLAVGGMHTLALDH 112
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSF-------LEPGE--------VPLKRKH 234
R + + G + G LGR T +S + + + L P E +P +K
Sbjct: 113 RNQVWSWGGNDSGVLGRDTAKSGAEQLKDADADSEDEDGELNPLESTPAVVEGLPKDKKI 172
Query: 235 IDDVFTGVYNTFISSKGSILAFGLN--NYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDK 291
+ T + + G + A+G N LG D ++Q+S P I +
Sbjct: 173 VQLAATDNLSAALYETGEVYAWGTFRCNEGILGFNKDVKIQRS-------PVKIPDFEN- 224
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-----KTI 346
LA+G+ H L L+++G +YA+G +LG K + E T + SL+ K +
Sbjct: 225 -IVQLAAGKDHLLGLDTKGVVYAWGNGQQYQLGRK-----ILERTRMTSLEPRSFGLKNV 278
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--------------------NGKE----- 381
+I G SFAI ++G + WG+ Q G GK+
Sbjct: 279 KAIGSGEFHSFAITTDGKVLSWGLNQYGQCGIHVDIEDGAVVSKPTEIEELTGKDIVYVT 338
Query: 382 -----DDILNSEGKIYAFGRHDYGRLGLKNVSEP-----------------VTEPTPIPS 419
L+S G +Y FGR D +G++ P T+ T +P
Sbjct: 339 GGEHHSLALSSSGDVYTFGRFDMKEIGIEKEKLPKDGVITDEHGNVRSLPVATKLTTLPK 398
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMKIEGKQLNNYT 478
+ ++A G+ S A+ +G+ + WG + Y LG G D D+ P +I ++
Sbjct: 399 CK-----AVAAGSHHSIAVTEDGIAFSWGFADTYALGLGNLDEDVATPTRINNTATRDHN 453
Query: 479 VLQVASGGQHSV 490
++ V GGQ SV
Sbjct: 454 IVLVGCGGQFSV 465
>gi|169784121|ref|XP_001826522.1| Ran exchange factor Prp20/Pim1 [Aspergillus oryzae RIB40]
gi|238508824|ref|XP_002385595.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus flavus
NRRL3357]
gi|83775267|dbj|BAE65389.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220688487|gb|EED44840.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus flavus
NRRL3357]
gi|391868514|gb|EIT77728.1| RCC1 domain protein [Aspergillus oryzae 3.042]
Length = 523
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 203/433 (46%), Gaps = 71/433 (16%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVME- 58
+KK + QK V PT + V CG+G +G+LGLGP DV
Sbjct: 75 IKKARVVEPRVTKQKPKVVINHAPTTRLN-----VYVCGEGSSGELGLGPERNAVDVKRP 129
Query: 59 RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS--------- 109
R L D VV+V VGGMH V LT D K+ TWG ND+GALGR+ D
Sbjct: 130 RLNPYLSADKVGVVQVAVGGMHCVALTHDNKILTWGVNDQGALGRDTTWDGGYKEVEDNK 189
Query: 110 ----------------EFIPQTV---NLPKKAV--QISAGDSHSVALLEDGTVYAWGSFR 148
E P + P+ V +++AGDS S AL EDG VY WG+FR
Sbjct: 190 SDADSDSDDDPALNPYESTPTAIPSDTFPESTVFVEVAAGDSSSFALTEDGQVYGWGTFR 249
Query: 149 DSHGSMGLKG-EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ G +G +Q TP + S+ I + G +H + L RG + + G +Q QLGR
Sbjct: 250 SNDGILGFDSTHTVQPTPTLIPSLKKIKHLVCGDNHALALDERGAVFSWGSGQQNQLGR- 308
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
R RN G L+P E L K+I V +G +++F + G + A+GLN++ GE
Sbjct: 309 --RIIERNRLNG---LQPREFGLP-KNIIHVGSGAFHSFAVHQSGKVYAWGLNSF---GE 359
Query: 267 ADSEVQKSGN-TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G+ P ++ SLS K + + G HHS+A+ + +GR D + GL
Sbjct: 360 TGIQAGAGGDEAAIVHPTIVDSLSGKNISQVCGGAHHSIAVADGEQCLVWGRLDGFQTGL 419
Query: 326 KNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
K + P + EPTP+P ++ T +A G+ S AID++G + WG
Sbjct: 420 KVDTLPEEAVIKDERGRPRILIEPTPVPGIKAST---VAAGSDHSIAIDTDGRPWSWGFS 476
Query: 372 NGYQLGNGKEDDI 384
YQ G G DDI
Sbjct: 477 ATYQTGQGTSDDI 489
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 48/261 (18%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQ 300
+ +G++ ++G +QLG E + + L ++F + + SG
Sbjct: 289 LDERGAVFSWGSGQQNQLGRRIIERNR-----------LNGLQPREFGLPKNIIHVGSGA 337
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVS 356
HS A++ GK+YA+G + +G G++ + + PT + SL K I+ + G S
Sbjct: 338 FHSFAVHQSGKVYAWGLNSFGETGIQAGAGGDEAAIVHPTIVDSLSGKNISQVCGGAHHS 397
Query: 357 FAI-DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
A+ D E L WG +G+Q G + D L E I + + GR + + EPT
Sbjct: 398 IAVADGEQCLV-WGRLDGFQ--TGLKVDTLPEEAVI----KDERGRPRI------LIEPT 444
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKIE 470
P+P ++ T+ A G+ S AID++G + WG YQ G G DD I+E +
Sbjct: 445 PVPGIKASTV---AAGSDHSIAIDTDGRPWSWGFSATYQTGQGTSDDIEVATIVENTAVR 501
Query: 471 GKQLNNYTVLQVASGGQHSVI 491
GK+LN +GGQ SV
Sbjct: 502 GKKLN-----WAGAGGQFSVF 517
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 87/223 (39%), Gaps = 62/223 (27%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLG--------LKNVSE------------PV-----TEPT 336
H +AL + KI +G +D G LG K V + P + PT
Sbjct: 151 HCVALTHDNKILTWGVNDQGALGRDTTWDGGYKEVEDNKSDADSDSDDDPALNPYESTPT 210
Query: 337 PIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
IPS + +A G+ SFA+ +G +YGWG
Sbjct: 211 AIPSDTFPESTVFVEVAAGDSSSFALTEDGQVYGWGTF---------------------- 248
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
R + G LG + PT IPSL K I + CG+ + A+D G ++ WG G
Sbjct: 249 --RSNDGILGFDSTHTVQPTPTLIPSL--KKIKHLVCGDNHALALDERGAVFSWGSGQQN 304
Query: 454 QLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVIL 492
QLG I+E ++ G Q + ++ V SG HS +
Sbjct: 305 QLGR----RIIERNRLNGLQPREFGLPKNIIHVGSGAFHSFAV 343
>gi|384489724|gb|EIE80946.1| hypothetical protein RO3G_05651 [Rhizopus delemar RA 99-880]
Length = 427
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 195/371 (52%), Gaps = 43/371 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKT-FALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G + CG D GQLG+ D R V D+D V+V+ GG+H+ +T +G +++
Sbjct: 44 TTSGHIFVCGTNDFGQLGIEGDEKNRPVPIKSVIDID-FVDVISGGLHSFAMTPEGSLFS 102
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WGC DEG LGRE + D P + + + V++ AGD ++AL +DG +Y WG++R + G
Sbjct: 103 WGCTDEGVLGREGKNDE---PVKIEIEETFVKVVAGDCINMALTKDGNLYTWGTYRGADG 159
Query: 153 SMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+ G Q TPL S+S IV I +G +H + L++ G L T G EQGQLGR
Sbjct: 160 AFGFSPTLSQQSTPLLFSSLSKETIVDITTGTNHSLALSADGRLFTWGYGEQGQLGR--- 216
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
R +SR+ + + PL K++ + G Y++ ++ + A+GLNN+ Q ++
Sbjct: 217 RISSRHPKDSLRC-----EPLSLKNVKLIGAGSYHSLAVTHDNQLYAWGLNNFRQCANSE 271
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGL- 325
V F+P L+ L + T++A G+H ++ +N G+++ FGR D +LGL
Sbjct: 272 EPV-------IFSPTLVP-LPESIGTIVAVDGGEHFTVIVNEAGEVFTFGRGDANQLGLP 323
Query: 326 KNVSEPV----TE---------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
++V P+ TE T +P+L + S+ ++ I+ EG Y WG +
Sbjct: 324 EDVIAPLKLSSTESAFKFIIPVATKVPNLPPVSQISVGSEFVLTACINGEG--YSWGFNS 381
Query: 373 GYQLGNGKEDD 383
+GNG +DD
Sbjct: 382 SNAIGNGNDDD 392
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 185/401 (46%), Gaps = 68/401 (16%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTA 196
G ++ G+ + G +G++G+ + P+ ++SV I V + SG H +T G+L +
Sbjct: 47 GHIFVCGT--NDFGQLGIEGDE-KNRPVPIKSVIDIDFVDVISGGLHSFAMTPEGSLFSW 103
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
GC ++G LGR + EP ++ ++ + V N ++ G++ +
Sbjct: 104 GCTDEGVLGREGKND------------EPVKIEIEETFVKVVAGDCINMALTKDGNLYTW 151
Query: 257 GLNNYSQ--LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
G + G + + Q+S TP L SLS + + +G +HSLAL+++G+++
Sbjct: 152 GTYRGADGAFGFSPTLSQQS------TPLLFSSLSKETIVDITTGTNHSLALSADGRLFT 205
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G + G+LG + S + L K + I G+ S A+ + LY WG+ N
Sbjct: 206 WGYGEQGQLGRRISSRHPKDSLRCEPLSLKNVKLIGAGSYHSLAVTHDNQLYAWGLNNFR 265
Query: 375 QLGNGKE---------------------------DDILNSEGKIYAFGRHDYGRLGL-KN 406
Q N +E I+N G+++ FGR D +LGL ++
Sbjct: 266 QCANSEEPVIFSPTLVPLPESIGTIVAVDGGEHFTVIVNEAGEVFTFGRGDANQLGLPED 325
Query: 407 VSEPV----TE---------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
V P+ TE T +P+L + S+ ++ I+ EG Y WG +
Sbjct: 326 VIAPLKLSSTESAFKFIIPVATKVPNLPPVSQISVGSEFVLTACINGEG--YSWGFNSSN 383
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+GNG +DD P K++GK L +++VA+GGQHSV L K
Sbjct: 384 AIGNGNDDDEPVPCKLKGKNLGTSKIVRVAAGGQHSVFLTK 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+ G I+ G +D+G+LG++ + P PI S+ D + G SFA+ EG L+
Sbjct: 45 TSGHIFVCGTNDFGQLGIE--GDEKNRPVPIKSVIDIDFVDVISGGLHSFAMTPEGSLFS 102
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
WG + LG ++D EP+KIE ++ T ++V +G ++ L K
Sbjct: 103 WGCTDEGVLGREGKND--EPVKIEIEE----TFVKVVAGDCINMALTK 144
>gi|325190927|emb|CCA25412.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 530
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 192/392 (48%), Gaps = 48/392 (12%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGPD------VMERKTFALVEDLDNVVEVVVGGMHTVC 83
LK + G +LT G GD GQL G D VM + + D+ ++ + GG+HT
Sbjct: 108 LKLGSQCGKILTFGSGDCGQLAHGVDEDDDMIVMYPRVVQRLADI-SISFISCGGLHTAA 166
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN----LPK-KAVQISAGDSHSVALLED 138
++ DG VYTWGCND+GALGR E E P V+ L K +A+Q AGD H++AL
Sbjct: 167 ISVDGSVYTWGCNDDGALGRNGE---ENFPAKVSGFGPLEKHQAIQAVAGDCHTLALTSS 223
Query: 139 GTVYAWGSFRDSHGSM-------GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
G V+ WG ++D G + G + Q P+ + + I + G+ + TS G
Sbjct: 224 GEVFTWGCYKDKEGKLWCDAPNAGKAFKNKQTEPVLIHGLEDISDVRCGSCFNLARTSCG 283
Query: 192 NLLTAGCPEQGQLGR---ITQRSASRNARRGMSF---LEPGEVPLKRKHIDDVFT---GV 242
+ + G EQGQLGR + ++ + F L P V L + + DV T G
Sbjct: 284 TVFSWGLGEQGQLGRKADLNMKNEHDKYDTKLVFDQHLTPARVTLGTESLSDVKTMGCGA 343
Query: 243 YNTF--ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP-HLIKSLSDKKFTMLASG 299
Y++ + G + A GLNNY QLG GNTC + L++ L + G
Sbjct: 344 YHSLFVVGGNGYLYACGLNNYGQLG--------IGNTCNSSDLALVEDLVAHNVMQVEGG 395
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGL------KNVSEPVTEPTPIPSLQDKTITSIACGN 353
HHS L G++Y FGR D G+LG+ N + + P ++ ITSI+CG+
Sbjct: 396 THHSAVLTVGGEVYTFGRGDSGQLGMLDECTSGNYKDRPQKVVMDPKAKNTYITSISCGS 455
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ A+ + ++ WG G+ LGNG+++D L
Sbjct: 456 NHAIALSKDNQVFSWGYGDMMALGNGRDEDEL 487
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 201/445 (45%), Gaps = 76/445 (17%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFI---PQTVN-LPKKAVQ-ISAGDSHSVALLEDGTVY 142
GK+ T+G D G L + D + I P+ V L ++ IS G H+ A+ DG+VY
Sbjct: 115 GKILTFGSGDCGQLAHGVDEDDDMIVMYPRVVQRLADISISFISCGGLHTAAISVDGSVY 174
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLK------LESVSGIVKIASGADHFVMLTSRGNLLTA 196
WG D G++G GE + P K LE I +A G H + LTS G + T
Sbjct: 175 TWGCNDD--GALGRNGE--ENFPAKVSGFGPLEKHQAIQAVA-GDCHTLALTSSGEVFTW 229
Query: 197 GC--PEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-RKHIDDVFTG-VYNTFISSKGS 252
GC ++G+L + NA + + V + + I DV G +N +S G+
Sbjct: 230 GCYKDKEGKL-----WCDAPNAGKAFKNKQTEPVLIHGLEDISDVRCGSCFNLARTSCGT 284
Query: 253 ILAFGLNNYSQLG-EAD----SEVQKSGNTCFFTPHLI--------KSLSDKKFTMLASG 299
+ ++GL QLG +AD +E K F HL +SLSD K + G
Sbjct: 285 VFSWGLGEQGQLGRKADLNMKNEHDKYDTKLVFDQHLTPARVTLGTESLSDVK--TMGCG 342
Query: 300 QHHSL-ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+HSL + G +YA G ++YG+LG+ N ++ + L + +
Sbjct: 343 AYHSLFVVGGNGYLYACGLNNYGQLGIGNTCNS-SDLALVEDLVAHNVMQVE-------- 393
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL------KNVSEPVT 412
G +L G++Y FGR D G+LG+ N +
Sbjct: 394 ------------------GGTHHSAVLTVGGEVYTFGRGDSGQLGMLDECTSGNYKDRPQ 435
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
+ P ++ ITSI+CG+ + A+ + ++ WG G+ LGNG+++D L+P KI+
Sbjct: 436 KVVMDPKAKNTYITSISCGSNHAIALSKDNQVFSWGYGDMMALGNGRDEDELKPKKIDSS 495
Query: 473 QLNN--YTVLQVASGGQHSVILAKP 495
+ ++ ++Q +GGQHS +L P
Sbjct: 496 KFDSGGMNIIQAEAGGQHSALLLAP 520
>gi|330925699|ref|XP_003301155.1| hypothetical protein PTT_12590 [Pyrenophora teres f. teres 0-1]
gi|311324334|gb|EFQ90745.1| hypothetical protein PTT_12590 [Pyrenophora teres f. teres 0-1]
Length = 649
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 215/503 (42%), Gaps = 124/503 (24%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G+G +G+LG G DV + + ++ NVV+V GGMH V LT+D K+ TW
Sbjct: 222 VFVFGEGGSGELGFGATKKAIDVKRPRYNEALTNM-NVVKVATGGMHVVALTKDNKILTW 280
Query: 94 GCNDEGALGREAEG------------------------DSEFIPQTVN---LPKKA--VQ 124
G ND GALGR+ D+E P V P+ V
Sbjct: 281 GVNDNGALGRDTSSANVKMRDVEADDSDSDEDETGGLNDAEATPTPVPSEFFPEDTIFVD 340
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADH 183
I+AGDS S AL +G VY WG+FR + G +G +G P+ L+SV ++++ G +H
Sbjct: 341 IAAGDSCSFALTTEGAVYGWGTFRKNEGILGFERGNHTAPRPVYLDSVKKVIQLVCGTNH 400
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
L ++ G +Q QLGR
Sbjct: 401 VYALDKDHHVYAWGNGQQNQLGR------------------------------------- 423
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
++ + I A N ++G DS ++K +K T +ASG +H
Sbjct: 424 --RVTERSLIQALQPN---KIGFHDSSIKKHS---------------QKITHIASGDYHG 463
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
LA+ +G I+A+G ++Y G + + V +P I SL+ K++T++A G+ + AI
Sbjct: 464 LAIAEDGHIWAWGANNYCETGYTDNAGADDASVLQPKIIHSLEGKSVTTLAAGSHHNIAI 523
Query: 360 DSEGVLYGWGMGNGYQLG--------NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G + WG +G Q G ED +L + GK + +
Sbjct: 524 TKGGEVLVWGRCDGSQTGLPPSQLEAETDEDKVLKNNGK-----------------PKIL 566
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+PTP+P L K I + ACG + ID G Y WG YQ G G +DDI P I+
Sbjct: 567 VQPTPLPGL--KNIVTGACGPDHTIVIDEAGKAYSWGFSANYQTGQGTDDDIEVPTMIDN 624
Query: 472 KQLNNYTVLQVASGGQHSVILAK 494
+ + GGQ+S++ +K
Sbjct: 625 TAVRETKLTWAGCGGQYSMLASK 647
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 224/481 (46%), Gaps = 58/481 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R V L +V + G H++ L D V+TWG N
Sbjct: 67 GTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGN 126
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ G +G D PQ V V ++AG+ HS+AL DGTV+AWGS + +G +G
Sbjct: 127 NAGQVGDGTNVDRP-TPQKVPGLSDVVAVAAGEFHSLALRADGTVWAWGS--NFYGQLGR 183
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+P ++ ++G+V +A+G D + + S G + G GQLG T
Sbjct: 184 GHSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTY------- 236
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+ L P +V + + + V G+Y+ + S G++ A+G N+ Q+G+
Sbjct: 237 ---IQRLAPTQVS-QLQGVSAVTAGLYHALALRSDGTVWAWGSNSSGQMGD--------- 283
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
T P ++ S + +A+ SL L +G ++A+G + G+LG+ ++ P
Sbjct: 284 GTWTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTAD---SP 340
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN--------- 386
P+ +TS+A G + + ++G L+ WG G QLG+G + +L+
Sbjct: 341 LPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSN 400
Query: 387 ---------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
S+G ++ +GR+ G+LG +E P +P L + S++
Sbjct: 401 VASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTER-HLPVRVPGLSG--VVSVSAS 457
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
SFA+ S+G ++GWG Q+G+G D P ++EG +V +ASGG H V
Sbjct: 458 GHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEGLS----SVKALASGGSHMVA 513
Query: 492 L 492
L
Sbjct: 514 L 514
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 217/486 (44%), Gaps = 70/486 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G D+GQLG G +V R T V+DL +V V G H V + DG V+ WG N
Sbjct: 968 GTVWSWGANDSGQLGDGTNV-ARTTPKPVQDLADVKAVTAGAHHVVAVRHDGTVWGWGAN 1026
Query: 97 DEGALGREAEGDS--EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
A G+ +G F P V AV+ SAG+ HS+ALL D +WGS +G +
Sbjct: 1027 ---AFGQVGDGTHFWRFRPVRVEGLLNAVETSAGEQHSLALLGDERALSWGSHE--YGQL 1081
Query: 155 G--LKGEGIQKTPLKLESVSGIV---KIASGADHFVMLTSRGNLLTAGCPEQGQLGR-IT 208
G G ++ +KL S +V +++ H L + G + T G GQLG T
Sbjct: 1082 GDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTT 1141
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ A+ G+ + P R + + S G++ A+G N + QLG+
Sbjct: 1142 ESRATPITVAGLGAMVA-VAPAAR----------HTLALRSDGTVWAWGDNTFGQLGDGS 1190
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
NT P + L +K T +A+G +HSLA+ +G ++A+G + +G+LG
Sbjct: 1191 -------NTRRTLPVQVVGL--EKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLG-DGT 1240
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--------- 379
+ PT + L ++A G S + +G L+ G + QLG G
Sbjct: 1241 MDARAVPTRMLGLDGA--VAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPF 1298
Query: 380 ---KEDDI------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ D + L +G ++ +G + G+LG V+ P P+P L
Sbjct: 1299 QVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRV-PAPVPGL--TA 1355
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I S+ G +FA+ SE + WG + QLG G D LEP ++G + V V +
Sbjct: 1356 IASVGAGTSHTFAVGSE--TWAWGRNSHGQLGTGDSSDRLEPTLVKGL----HGVKSVLA 1409
Query: 485 GGQHSV 490
GG SV
Sbjct: 1410 GGDFSV 1415
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 204/461 (44%), Gaps = 57/461 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQ+G G +R + A VE L +V + GG H V L DG V+TWG N
Sbjct: 468 GTVWGWGRNAQGQMGDG-TTKDRASPARVEGLSSVKALASGGSHMVALRTDGTVWTWGYN 526
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D Q L ++AG S+AL DGTV+AWG + G +G
Sbjct: 527 GAGQLGDGTTTDRRAPVQVTGL-SGVTSVAAGAYFSLALRTDGTVWAWGDGFE--GQLG- 582
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G G+Q+ +P+++ ++ +VK+A+GA H + + G + G +GQ+G S S
Sbjct: 583 DGAGVQRASPVQVTGLTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMG---DGSWSDR 639
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
R + G + V G+Y++ ++ G++ A+G N Y Q G+
Sbjct: 640 FRAVQVYGLTG--------VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDG------- 684
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
G T + LS K +L + H LA+ +G + +G + +G+LGL +
Sbjct: 685 GVTPRVVAGAVPGLSGIK--LLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWS-SL 741
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--------------- 379
P + L ++ G S + ++G + WG QLG+G
Sbjct: 742 PVQVRGLGQG--RRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLP 799
Query: 380 ---------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ +L +G ++++G + G+LG V+ P + L + ++
Sbjct: 800 CARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRA-YPAKVEGLWG--VVAVLA 856
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G S + ++G ++ WG QLG+G D P++++G
Sbjct: 857 GGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKG 897
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 52/345 (15%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S K+A+GA H + +T G + G GQLG + S + +R ++ PG +
Sbjct: 48 SATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLG-----TGSVSFQRVVAQQVPGLTDVT 102
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
D ++ + + ++ +G NN Q+G+ N TP + LSD
Sbjct: 103 SIAAGD----AHSLALRADRTVWTWGGNNAGQVGDGT-------NVDRPTPQKVPGLSD- 150
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G+ HSLAL ++G ++A+G + YG+LG + S+P P+P + + ++A
Sbjct: 151 -VVAVAAGEFHSLALRADGTVWAWGSNFYGQLG-RGHSQP--GPSPAQVVGLTGVVALAA 206
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGK------------------------EDDILNS 387
G S A+ S+G ++ WG QLG+G L S
Sbjct: 207 GFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAVTAGLYHALALRS 266
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+G ++A+G + G++G ++ P+P+ ++A + S + +G ++ W
Sbjct: 267 DGTVWAWGSNSSGQMGDGTWTD---RPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAW 323
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G+ + QLG G D P+++ G V +A+G QH+V+L
Sbjct: 324 GLNSQGQLGIGTTADSPLPVRVRGLG----AVTSLAAGTQHAVVL 364
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G F +VE LD V V GG H+V L EDG V+TWG N
Sbjct: 1273 GTLWATGNNSHGQLGEGTFTNRLSPFQVVE-LDQVRTVRAGGYHSVALREDGTVWTWGHN 1331
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+G LG + + +P V + AG SH+ A+ + +AWG R+SHG +G
Sbjct: 1332 GQGQLG-DGTVTTRRVPAPVPGLTAIASVGAGTSHTFAVGSE--TWAWG--RNSHGQLGT 1386
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ P ++ + G+ + +G D V + G+ ++ G G LG
Sbjct: 1387 GDSSDRLEPTLVKGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLG 1435
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITS----IACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G + S P EP+ P+ + + + S +A G S + G ++ WG GN
Sbjct: 24 MGCEGTSSPA-EPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWG-------GN 75
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
G G+LG +VS +P L D +TSIA G+ S A+
Sbjct: 76 GS-------------------GQLGTGSVSFQRVVAQQVPGLTD--VTSIAAGDAHSLAL 114
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
++ ++ WG N Q+G+G D P K+ G V+ VA+G HS+ L
Sbjct: 115 RADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLS----DVVAVAAGEFHSLAL 164
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 231/496 (46%), Gaps = 77/496 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTF--ALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G G V G GQ G E + V+ L +VV + G H++ L +DG V+
Sbjct: 63 GDGTVWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVAIAAGRYHSLTLKKDGTVWA 117
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG---SFRD 149
WG N +G LG G+ +P V K V I+AGD +S+ L +DGTV+ WG S +
Sbjct: 118 WGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQV 177
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
GS P +++ + +V IA+G D+ + L G + +
Sbjct: 178 IDGS-----NKDFSVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWMWEY----------K 222
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTFISSK-GSILAFGLNNYSQLG 265
+ RRG P VP++ + + DV G Y++ K G++ A+G N Y QLG
Sbjct: 223 YNYYEQLRRGADEYSP--VPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLG 280
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
SE + P +K+L D +A+G++HSLAL +G I+A+G +++G+LG
Sbjct: 281 NGKSEDS-------YDPVQVKNLKD--VVAIAAGENHSLALKKDGTIWAWGDNEWGQLG- 330
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-- 383
++SE + P SL+D + +IA G S A+ +G ++ WG QLGNG D
Sbjct: 331 NSISEKLCVPVQFKSLKD--VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSY 388
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
L +G ++A+G +++G+LG ++ P + L+
Sbjct: 389 VPVQVRGLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLG-NGTNKSSFVPVQVKGLK 447
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK---EDDILEPMKIEGKQLNNYT 478
D + +IA G+ S A +G ++ WG QLGNG P++++G +
Sbjct: 448 D--VVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLK----D 501
Query: 479 VLQVASGGQHSVILAK 494
V+ VA+G HS+ L K
Sbjct: 502 VVAVAAGSVHSLALKK 517
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 214/460 (46%), Gaps = 64/460 (13%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
VE L +VV + G H++ L +DG V+ WG N G LG DS + P V K V
Sbjct: 243 VEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDS-YDPVQVKNLKDVVA 301
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
I+AG++HS+AL +DGT++AWG + G +G P++ +S+ +V IA+G +H
Sbjct: 302 IAAGENHSLALKKDGTIWAWGD--NEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHS 359
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---- 240
+ L G + + G GQLG N S+ VP++ + + DV
Sbjct: 360 LALKKDGTVWSWGNNYYGQLG---------NGNSIDSY-----VPVQVRGLKDVVAIATG 405
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
++ + G++ A+G N + QLG N F P +K L D +A+G
Sbjct: 406 NAHSLALKKDGTVWAWGNNEFGQLGNGT-------NKSSFVPVQVKGLKD--VVAIAAGS 456
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKN--VSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
HSLA +G ++A+G +++G+LG + + P + L+D + ++A G+ S A
Sbjct: 457 DHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKD--VVAVAAGSVHSLA 514
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD-----------------------ILNSEGKIYAFG 395
+ +G ++ WG LGN E +L +G ++A+G
Sbjct: 515 LKKDGTIWAWGSNYHGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWG 574
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ L + + P I L+D + +IA G S + +G ++ WG QL
Sbjct: 575 EVWFDLLNENSRLVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKDGTVWAWGDNFFGQL 632
Query: 456 GNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
GN +E L P++++G + +L +A+G HS+ + K
Sbjct: 633 GNSPREKYSLVPVQVKGLK----DILAIATGEWHSLAIKK 668
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 214/455 (47%), Gaps = 64/455 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + G + GQLG + E+ + + L +VV + G H++ L +DG V++WG
Sbjct: 316 GTIWAWGDNEWGQLG--NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWGN 373
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG DS ++P V K V I+ G++HS+AL +DGTV+AWG + G
Sbjct: 374 NYYGQLGNGNSIDS-YVPVQVRGLKDVVAIATGNAHSLALKKDGTVWAWG-----NNEFG 427
Query: 156 LKGEGIQKT---PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G G K+ P++++ + +V IA+G+DH + G + G E GQLG
Sbjct: 428 QLGNGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLG------- 480
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEAD 268
N G + + VP++ K + DV V++ + G+I A+G N + LG
Sbjct: 481 --NGSGG--YGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLG--- 533
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+++++S F P +K L D +A+G +HSL L +G ++A+G + L +
Sbjct: 534 NDIERS-----FVPVQVKGLKD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSR 586
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED------ 382
+ P I L+D + +IA G S + +G ++ WG QLGN +
Sbjct: 587 LVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVP 644
Query: 383 -------DIL------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
DIL +G ++A+G + G+LG + + P+ K
Sbjct: 645 VQVKGLKDILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK 704
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ +I+ G+ S A+ +G ++GWG QLGNG
Sbjct: 705 DVLAISAGSYHSLALKKDGTVWGWGANARGQLGNG 739
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 199/424 (46%), Gaps = 65/424 (15%)
Query: 100 ALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE 159
A ++E DSE + L +QI+AG+ HS+AL DGTV+AWG + G G +
Sbjct: 27 ATTHQSESDSETTLLS-KLENNIIQIAAGNYHSLALKGDGTVWAWG--WNHWGQCGTEES 83
Query: 160 GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
I P+K++ + +V IA+G H + L G + G + GQLG +R+A
Sbjct: 84 SI--IPVKVKGLKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLG-------NRDAG-- 132
Query: 220 MSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
E VP++ K + DV Y+ + G++ +GLN Q V
Sbjct: 133 ----EYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQ-------VIDGS 181
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG-RHDYGRLGLKNVSEPVTE 334
N F P IK L D +A+G+ +SLAL +G ++ + +++Y + E
Sbjct: 182 NKDFSVPFQIKGLKD--VVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPV 239
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
P + L+D + +IA G S A+ +G ++ WG QLGNGK +D
Sbjct: 240 PVQVEGLKD--VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLK 297
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L +G I+A+G +++G+LG ++SE + P SL+D + +IA
Sbjct: 298 DVVAIAAGENHSLALKKDGTIWAWGDNEWGQLG-NSISEKLCVPVQFKSLKD--VVAIAA 354
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ +G ++ WG QLGNG D P+++ G + V+ +A+G HS+
Sbjct: 355 GCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK----DVVAIATGNAHSL 410
Query: 491 ILAK 494
L K
Sbjct: 411 ALKK 414
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFA--LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ TGQLG ++ ++ V+ + +V+ + G H++ L +DG V+ WG
Sbjct: 670 GTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLAISAGSYHSLALKKDGTVWGWG 729
Query: 95 CNDEGALGREAEGDSEFIPQTV 116
N G LG G +P V
Sbjct: 730 ANARGQLGNGGAGVYSTVPVQV 751
>gi|124088041|ref|XP_001346941.1| Regulator of chromosome condensation [Paramecium tetraurelia strain
d4-2]
gi|145474729|ref|XP_001423387.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057330|emb|CAH03314.1| Regulator of chromosome condensation, putative [Paramecium
tetraurelia]
gi|124390447|emb|CAK55989.1| unnamed protein product [Paramecium tetraurelia]
Length = 494
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 220/446 (49%), Gaps = 59/446 (13%)
Query: 55 DVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEF 111
++ E K +++L+N + +V GGMH + LT GKVY++GC+D+G LGR + EG+
Sbjct: 31 ELYEVKRPYQIKELNNLSITQVACGGMHALILTSQGKVYSFGCDDKGVLGRPKIEGEDAR 90
Query: 112 IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV 171
+P + I+ G SHS+A +G VY WG + ++HG +G E +QK P K++++
Sbjct: 91 VPALITDLPPVDMIACGSSHSIAANSNGLVYFWGFYANTHGPIG---ESVQK-PKKMDNI 146
Query: 172 S-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+ GI KI G +H ++L LLT G E +GR +S +R R M L P + +
Sbjct: 147 TEGIKKILCGQNHTMVLLESQKLLTWGDAETLVIGR---KSETR--RSVMQNLNPQPIKM 201
Query: 231 KRKHIDDVFTGVYNTFIS-----SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
K K I ++FTG + F+ +K I +GLNNY QLG + E Q+ P LI
Sbjct: 202 K-KPILNIFTGASHAFVKVQMKDNKVGIYGWGLNNYGQLGIGNQENQQ-------LPTLI 253
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDK 344
+ + + G+HH++AL+S+G +Y+FGRHD G+LGL + ++E + E ++
Sbjct: 254 EFFDNIDVIDMVGGEHHTIALDSQGNLYSFGRHDDGQLGLGEEINEQLKEQA--QKQLEE 311
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
I S I + L +G+++ + D +G
Sbjct: 312 EIQSQKLNESNKKKISKKNKL----------------------QGELFEIQKSD-KVIGY 348
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ ++ P IP +Q +I +FAI EG L+ WG G Y LG E+
Sbjct: 349 EFITSPQM-IKDIPKMQ-----TIYSSMHFNFAISQEGQLFSWGNGQSYVLGTRNENSQF 402
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSV 490
+P I N +LQ++ G H +
Sbjct: 403 KPRDITTI-FKNEKLLQISLGASHVI 427
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPS 340
P+ IK L++ T +A G H+L L S+GK+Y+FG D G LG + E P I
Sbjct: 38 PYQIKELNNLSITQVACGGMHALILTSQGKVYSFGCDDKGVLGRPKIEGEDARVPALITD 97
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWG--------MGNGYQLGNGKEDDI-------- 384
L + IACG+ S A +S G++Y WG +G Q K D+I
Sbjct: 98 L--PPVDMIACGSSHSIAANSNGLVYFWGFYANTHGPIGESVQKPK-KMDNITEGIKKIL 154
Query: 385 --------LNSEGKIYAFGRHDYGRLGLKNVSEP--VTEPTPIPSLQDKTITSIACGNCV 434
L K+ +G + +G K+ + + P P K I +I G
Sbjct: 155 CGQNHTMVLLESQKLLTWGDAETLVIGRKSETRRSVMQNLNPQPIKMKKPILNIFTGASH 214
Query: 435 SFAI----DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+F D++ +YGWG+ N QLG G +++ P IE +N V+ + G H++
Sbjct: 215 AFVKVQMKDNKVGIYGWGLNNYGQLGIGNQENQQLPTLIEF--FDNIDVIDMVGGEHHTI 272
Query: 491 IL 492
L
Sbjct: 273 AL 274
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 116/298 (38%), Gaps = 76/298 (25%)
Query: 12 QAENPSQKVFV-TSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
+ + P +F S A ++ K + G + GQLG+G + ++ L+E DN
Sbjct: 200 KMKKPILNIFTGASHAFVKVQMKDNKVGIYGWGLNNYGQLGIG-NQENQQLPTLIEFFDN 258
Query: 71 --VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG----------------REAEGDS--- 109
V+++V G HT+ L G +Y++G +D+G LG E E S
Sbjct: 259 IDVIDMVGGEHHTIALDSQGNLYSFGRHDDGQLGLGEEINEQLKEQAQKQLEEEIQSQKL 318
Query: 110 ------------------------------EFI--PQTVNLPKKAVQISAGDSHSVALLE 137
EFI PQ + K I + + A+ +
Sbjct: 319 NESNKKKISKKNKLQGELFEIQKSDKVIGYEFITSPQMIKDIPKMQTIYSSMHFNFAISQ 378
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRG-NL 193
+G +++WG+ + +G + E Q P + ++ +++I+ GA H + TS N
Sbjct: 379 EGQLFSWGNGQSY--VLGTRNENSQFKPRDITTIFKNEKLLQISLGASHVIAYTSTDLNY 436
Query: 194 LTAGCPE-----QGQLGRIT--QRSASR--------NARRGMSFLEPGEVPLKRKHID 236
T E Q Q +I +RS SR + +R + +P+K ID
Sbjct: 437 NTQKVDESIIKIQDQKTKIKKPRRSNSREGSKEKSLSMKRNEQKFDDSLIPVKDLKID 494
>gi|67541629|ref|XP_664582.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|40742434|gb|EAA61624.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|259483716|tpe|CBF79334.1| TPA: RCC1 Chromatin-associated guanine nucleotide exchange factor
for Ran (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 533
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 210/436 (48%), Gaps = 81/436 (18%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVME----RK 60
+V++ A P KV + + PT K V CG+G +G+LGLG +V++ R
Sbjct: 87 RVVKPAAAKPRPKVVINN--APTAKLN-----VYVCGEGSSGELGLGVGKNVIDVKRPRL 139
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA--EG----------- 107
L+ D VV+V VGGMH V LT D KV TWG ND+GALGR+ EG
Sbjct: 140 NPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVNDQGALGRDTTWEGGYKDMDNRDSD 199
Query: 108 ---------DSEFIPQTVN---LPKKA-------VQISAGDSHSVALLEDGTVYAWGSFR 148
+ + P +P A V+++AGDS S AL ++G VY WG+FR
Sbjct: 200 SDSDSDSDDNPDLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFR 259
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ G +G + +Q TP L + I + G +H + L +G +L+ G +Q QLGR
Sbjct: 260 SNDGILGFDAKTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGR- 318
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG- 265
R RN G L+P E L K I + G +++F + G + A+GLN++ + G
Sbjct: 319 --RIIERNKLNG---LQPREFGLP-KGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGI 372
Query: 266 ---EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
DSE P ++ SLS K T + G HHS+A +G+ +GR D +
Sbjct: 373 RENAGDSEA------AIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQ 426
Query: 323 LGLKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
GLK + P + EPT +P ++ K ++A G+ S AID+ G + W
Sbjct: 427 TGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAK---AVAAGSDHSIAIDTSGRPWSW 483
Query: 369 GMGNGYQLGNGKEDDI 384
G YQ G G +DD+
Sbjct: 484 GFSATYQTGQGTQDDV 499
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 36/255 (14%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM------LASGQ 300
++ KG++L++G +QLG E K + L ++F + + +G
Sbjct: 299 LNDKGAVLSWGSGQQNQLGRRIIERNK-----------LNGLQPREFGLPKGIVHIGAGA 347
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
HS A++ GK++A+G + +G G++ + + PT + SL K +T I G S
Sbjct: 348 FHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHS 407
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
A +G WG +GYQ G + D L + I D R+ + EPT
Sbjct: 408 IAATQDGECLVWGRLDGYQ--TGLKIDTLPDDAVIK--DERDRPRI--------LIEPTA 455
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
+P ++ K ++A G+ S AID+ G + WG YQ G G +DD+ IE +
Sbjct: 456 VPGIKAK---AVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRG 512
Query: 477 YTVLQVASGGQHSVI 491
++ GGQ SV
Sbjct: 513 KSLNWAGGGGQFSVF 527
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 120/329 (36%), Gaps = 74/329 (22%)
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
P + + SR+ +R P + I++ T N ++ +GS G
Sbjct: 65 APAKKRRADAEDAETSRSTKRARVVKPAAAKPRPKVVINNAPTAKLNVYVCGEGSSGELG 124
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L +G+ +V++ PHL+ D +A G H +AL + K+ +G
Sbjct: 125 LG----VGKNVIDVKRP----RLNPHLLPD--DVGVVQVAVGGMHCVALTHDNKVLTWGV 174
Query: 318 HDYGRLGLKNVSE---------------------------PVTEPTPIPSL---QDKTIT 347
+D G LG E PT IPS I
Sbjct: 175 NDQGALGRDTTWEGGYKDMDNRDSDSDSDSDSDDNPDLNPHECTPTAIPSSAFPHGTVIV 234
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+A G+ SFA+ EG +YGWG F R + G LG
Sbjct: 235 EVAAGDSSSFALTDEGQVYGWGT-----------------------F-RSNDGILGFDAK 270
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
++ T P +P L K I + CG+ A++ +G + WG G QLG I+E
Sbjct: 271 TKVQTTPKLLPDL--KKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGR----RIIERN 324
Query: 468 KIEGKQLNNY----TVLQVASGGQHSVIL 492
K+ G Q + ++ + +G HS +
Sbjct: 325 KLNGLQPREFGLPKGIVHIGAGAFHSFAV 353
>gi|444313687|ref|XP_004177501.1| hypothetical protein TBLA_0A01815 [Tetrapisispora blattae CBS 6284]
gi|387510540|emb|CCH57982.1| hypothetical protein TBLA_0A01815 [Tetrapisispora blattae CBS 6284]
Length = 497
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 192/409 (46%), Gaps = 76/409 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERK-------TFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
V T G G +LG GP ++ + ED+ +V + VGGMHT+ L ++ ++
Sbjct: 49 VFTWGTGSMCELGQGPLAKNKEIKRPRINNYLNKEDI-GIVSITVGGMHTIALDKNENIW 107
Query: 92 TWGCNDEGALGREAEGDSE---------------------------------FIPQTVNL 118
+WGCND GALGR+ G E + ++++
Sbjct: 108 SWGCNDVGALGRDTSGAKEVLKDMDKENASSDEDDDGDLNDLESTPMKIEKHYFKESLDQ 167
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG--IQKTPLKLESVS--GI 174
K VQ++A D+ S L +G VYAWG+FR + G +G E IQ+TP KL S S I
Sbjct: 168 EAKIVQLTATDNASCILFNNGDVYAWGTFRCNEGILGFYKEDIKIQRTPWKLPSFSKYNI 227
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V+IASG DH + L G + G +Q QLGR R + L+P L +H
Sbjct: 228 VQIASGKDHLLFLDESGEVFAWGNGQQNQLGRKILE------RFRLKTLDPRSFGL--RH 279
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-- 291
+ + +G + F + G+++++GLN + Q G ++ E+Q G L+ S
Sbjct: 280 VKYIASGENHCFALKKDGTLVSWGLNQFGQCGISE-EIQDGGIVSIPKKVLLPVNSSNGF 338
Query: 292 -KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIPS 340
K M+ +G+HHSL LN +G IY+FGR D +G+ K+V E PIP+
Sbjct: 339 GKIKMICAGEHHSLLLNEDGDIYSFGRLDMCEVGISKKDLPDYVYKDVHEK-PRSIPIPT 397
Query: 341 LQD-------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
L I G+ S AI + G++Y WG G+ Y +G G D
Sbjct: 398 LLKGNNNEPLPNFKYIDVGSHHSIAISTNGIMYSWGFGDTYAVGLGPTD 446
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 172/446 (38%), Gaps = 104/446 (23%)
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEG--IQKTPLKLESVS--------GIVKIASGADHFV 185
LE V+ WG+ GSM G+G + +K ++ GIV I G H +
Sbjct: 44 LEPLDVFTWGT-----GSMCELGQGPLAKNKEIKRPRINNYLNKEDIGIVSITVGGMHTI 98
Query: 186 MLTSRGNLLTAGCPEQGQLGRIT-----------QRSASRNARRGMSFLEPGEVPLK-RK 233
L N+ + GC + G LGR T + +AS + + P+K K
Sbjct: 99 ALDKNENIWSWGCNDVGALGRDTSGAKEVLKDMDKENASSDEDDDGDLNDLESTPMKIEK 158
Query: 234 H------------IDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNT 277
H + T + + + G + A+G ++ LG + D ++Q+
Sbjct: 159 HYFKESLDQEAKIVQLTATDNASCILFNNGDVYAWGTFRCNEGILGFYKEDIKIQR---- 214
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
TP + S S +ASG+ H L L+ G+++A+G +LG K + +
Sbjct: 215 ---TPWKLPSFSKYNIVQIASGKDHLLFLDESGEVFAWGNGQQNQLGRKILERFRLKTLD 271
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------- 383
S + + IA G FA+ +G L WG+ Q G +E
Sbjct: 272 PRSFGLRHVKYIASGENHCFALKKDGTLVSWGLNQFGQCGISEEIQDGGIVSIPKKVLLP 331
Query: 384 ---------------------ILNSEGKIYAFGRHDYGRLGL----------KNVSEPVT 412
+LN +G IY+FGR D +G+ K+V E
Sbjct: 332 VNSSNGFGKIKMICAGEHHSLLLNEDGDIYSFGRLDMCEVGISKKDLPDYVYKDVHEK-P 390
Query: 413 EPTPIPSLQD-------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DIL 464
PIP+L I G+ S AI + G++Y WG G+ Y +G G D D
Sbjct: 391 RSIPIPTLLKGNNNEPLPNFKYIDVGSHHSIAISTNGIMYSWGFGDTYAVGLGPTDGDTE 450
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSV 490
P +I+ + ++ V GGQ SV
Sbjct: 451 IPTRIKNTATADEQMIFVGCGGQFSV 476
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED----LDNVVEVVVGGMHTVCLTEDGKVYT 92
G V G G QLG ++ER ++ L +V + G H L +DG + +
Sbjct: 244 GEVFAWGNGQQNQLGR--KILERFRLKTLDPRSFGLRHVKYIASGENHCFALKKDGTLVS 301
Query: 93 WGCNDEGALGREAE---GDSEFIPQTVNLPK-------KAVQISAGDSHSVALLEDGTVY 142
WG N G G E G IP+ V LP K I AG+ HS+ L EDG +Y
Sbjct: 302 WGLNQFGQCGISEEIQDGGIVSIPKKVLLPVNSSNGFGKIKMICAGEHHSLLLNEDGDIY 361
Query: 143 AWGSF 147
++G
Sbjct: 362 SFGRL 366
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 384 ILNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDS 440
IL + G +YA+G R + G LG + P +PS I IA G +D
Sbjct: 183 ILFNNGDVYAWGTFRCNEGILGFYKEDIKIQRTPWKLPSFSKYNIVQIASGKDHLLFLDE 242
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY---TVLQVASGGQHSVILAK 494
G ++ WG G QLG ILE +++ ++ V +ASG H L K
Sbjct: 243 SGEVFAWGNGQQNQLGR----KILERFRLKTLDPRSFGLRHVKYIASGENHCFALKK 295
>gi|406863007|gb|EKD16056.1| GDP/GTP exchange factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 691
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 188/405 (46%), Gaps = 69/405 (17%)
Query: 43 GQGDTGQLGLGP----------DVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVY 91
G+G G+LGLG DV + L+ D VV++ VGGMHT+ LT D K+
Sbjct: 260 GEGSAGELGLGARKGEDGKKVIDVTRPRLNLLLSAKDVGVVQLSVGGMHTIALTRDNKIL 319
Query: 92 TWGCNDEGALGREAEGD---------------------------SEFIPQTVN---LPKK 121
TWG ND+GALGRE + +E P+ V+ P+
Sbjct: 320 TWGVNDQGALGRETPNEGKMVDLPAEDDDSDSDSDDDDDSGLNPNEATPKAVDPAHFPEG 379
Query: 122 AV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIA 178
+ +SAGDS S AL + G VY WG+FR + G +G + TP+ + + IVK+A
Sbjct: 380 TIFASVSAGDSVSFALTDTGLVYGWGTFRGNDGILGFTPKVKTAATPMLIPELKEIVKLA 439
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G +H + + +G + T G EQ QL R AR L P E L RK I V
Sbjct: 440 VGTNHVLAVNKKGKVFTWGAGEQSQLARRVV------ARTAAGALVPREFGLGRKKIVQV 493
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y++F + KG + ++GLN++ Q G + E ++ N+ TP + L +
Sbjct: 494 GCGDYHSFAVDDKGDVYSWGLNSFGQTGISKDEEEQDSNS-IATPTKVDILDGYDIKQIV 552
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQD 343
G HHS+A + G++ +GR D G++ P + +P +PS++
Sbjct: 553 GGAHHSIACTTSGQVLVWGRVDNNEGGMEVDEMPKDHLFFDEAGKARYLIKPLVLPSIKG 612
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
++S G A+DS+G Y WG YQ G G +D+ +E
Sbjct: 613 VQVSS---GPDTCIAVDSDGKAYSWGFSGNYQTGQGHSNDVSEAE 654
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 155/389 (39%), Gaps = 78/389 (20%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS-------------ASRNARRG 219
G+V+++ G H + LT +LT G +QG LGR T S +
Sbjct: 298 GVVQLSVGGMHTIALTRDNKILTWGVNDQGALGRETPNEGKMVDLPAEDDDSDSDSDDDD 357
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
S L P E K +D F S S G ++F L + + + G
Sbjct: 358 DSGLNPNEA--TPKAVDPAHFPEGTIFASVSAGDSVSFALTDTGLVYGWGTFRGNDGILG 415
Query: 279 F-------FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
F TP LI L K+ LA G +H LA+N +GK++ +G + +L + V+
Sbjct: 416 FTPKVKTAATPMLIPEL--KEIVKLAVGTNHVLAVNKKGKVFTWGAGEQSQLARRVVART 473
Query: 332 VTEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED------ 382
+P L K I + CG+ SFA+D +G +Y WG+ + Q G K++
Sbjct: 474 AAGAL-VPREFGLGRKKIVQVGCGDYHSFAVDDKGDVYSWGLNSFGQTGISKDEEEQDSN 532
Query: 383 --------DILN------------------SEGKIYAFGRHDYGRLGLKNVSEP------ 410
DIL+ + G++ +GR D G++ P
Sbjct: 533 SIATPTKVDILDGYDIKQIVGGAHHSIACTTSGQVLVWGRVDNNEGGMEVDEMPKDHLFF 592
Query: 411 --------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
+ +P +PS++ ++S G A+DS+G Y WG YQ G G +D
Sbjct: 593 DEAGKARYLIKPLVLPSIKGVQVSS---GPDTCIAVDSDGKAYSWGFSGNYQTGQGHSND 649
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ E I+ + ++ GGQ ++
Sbjct: 650 VSEAEWIDNSAVRGKKLVWSGVGGQFGIV 678
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 90/250 (36%), Gaps = 65/250 (26%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
T V + F+ +GS GL ++ GE +V +L+ S D L+ G
Sbjct: 251 TQVLDAFVFGEGSAGELGLG--ARKGEDGKKVIDVTRPRL---NLLLSAKDVGVVQLSVG 305
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSE----------------------------- 330
H++AL + KI +G +D G LG + +E
Sbjct: 306 GMHTIALTRDNKILTWGVNDQGALGRETPNEGKMVDLPAEDDDSDSDSDDDDDSGLNPNE 365
Query: 331 ---PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
+P P + S++ G+ VSFA+ G++YGWG G
Sbjct: 366 ATPKAVDPAHFP--EGTIFASVSAGDSVSFALTDTGLVYGWGTFRG-------------- 409
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+ G LG + P IP L K I +A G A++ +G ++ W
Sbjct: 410 ----------NDGILGFTPKVKTAATPMLIPEL--KEIVKLAVGTNHVLAVNKKGKVFTW 457
Query: 448 GMGNGYQLGN 457
G G QL
Sbjct: 458 GAGEQSQLAR 467
>gi|344299635|gb|EGW29988.1| pheromone response pathway [Spathaspora passalidarum NRRL Y-27907]
Length = 497
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 196/406 (48%), Gaps = 61/406 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDLD--NVVEVVVGGMHTVCLTEDGK 89
+ G G +LGLGP ++ + E L+ +V+ VGGMHT+ + +
Sbjct: 54 IFVWGTGSMCELGLGPSSKNKEVKRPRLNPYLTEEKLNGTKIVDFSVGGMHTLAVDGKSR 113
Query: 90 VYTWGCNDEGALGREAE-----------------------GDSEFIPQTV-NLPKKA--V 123
+++WG ND G LGR+ ++E P V NLP + V
Sbjct: 114 IWSWGGNDSGVLGRDTSKAKEVLKDMDGGDSDDDDEDGDLNEAESTPGLVENLPHDSQIV 173
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGE-GIQKTPLKLESVSGIVKIASGA 181
Q++A D+ S L +G VYAWG FR + G +G L+ E IQKTPLK++ + IV++A+G
Sbjct: 174 QVAATDNLSAVLFANGDVYAWGCFRCNEGLLGFLRDEIKIQKTPLKIKELKNIVQLAAGK 233
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
DH + L S+G + G +Q QLGR R R+ R LEP + L +I + +G
Sbjct: 234 DHLLALDSKGIVYAWGNGQQFQLGR---RILERHRYRA---LEPQQFGLY--NIRYIASG 285
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
++ F I + A+GLN Y Q DS+ + + P LI LS K + +G+
Sbjct: 286 DFHCFAIDHNDKVYAWGLNQYGQCALTDSKGRLEDGSIISKPTLIPELSYKGIKEIVAGE 345
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVS-----------EPVTEPTPIP----SLQDKT 345
HHSLAL ++G +YA+GR+D +G+ P + PTP +
Sbjct: 346 HHSLALTADGDVYAWGRYDMKEVGIPKDKLPESTFKDQHGNPRSVPTPTKLQFGGKEGIK 405
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
I +I G+ SFA+ +G +Y WG + Y G G D+ + +I
Sbjct: 406 IKAIGAGSHHSFAVTDDGFVYSWGFADTYGPGLGPLDEDVEKPTRI 451
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 54/281 (19%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS---EVQKSG-------------- 275
K +D G++ + K I ++G N+ LG S EV K
Sbjct: 94 KIVDFSVGGMHTLAVDGKSRIWSWGGNDSGVLGRDTSKAKEVLKDMDGGDSDDDDEDGDL 153
Query: 276 NTCFFTPHLIKSL-SDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPV 332
N TP L+++L D + +A+ + S L + G +YA+G R + G LG E
Sbjct: 154 NEAESTPGLVENLPHDSQIVQVAATDNLSAVLFANGDVYAWGCFRCNEGLLGFLR-DEIK 212
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
+ TP+ + K I +A G A+DS+G++Y WG G +QLG +
Sbjct: 213 IQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQFQLGRRILERHRYRALEPQ 272
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPS 419
++ K+YA+G + YG+ L + +++PT IP
Sbjct: 273 QFGLYNIRYIASGDFHCFAIDHNDKVYAWGLNQYGQCALTDSKGRLEDGSIISKPTLIPE 332
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
L K I I G S A+ ++G +Y WG + ++G K+
Sbjct: 333 LSYKGIKEIVAGEHHSLALTADGDVYAWGRYDMKEVGIPKD 373
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 57/264 (21%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLALNSEGK 311
I +G + +LG S K P+L + L+ K + G H+LA++ + +
Sbjct: 54 IFVWGTGSMCELGLGPSSKNKEVKRPRLNPYLTEEKLNGTKIVDFSVGGMHTLAVDGKSR 113
Query: 312 IYAFGRHDYGRLGLKN-----------------------VSEPVTEPTPIPSL-QDKTIT 347
I+++G +D G LG ++E + P + +L D I
Sbjct: 114 IWSWGGNDSGVLGRDTSKAKEVLKDMDGGDSDDDDEDGDLNEAESTPGLVENLPHDSQIV 173
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+A + +S + + G +Y WG R + G LG
Sbjct: 174 QVAATDNLSAVLFANGDVYAWGCF------------------------RCNEGLLGFLR- 208
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
E + TP+ + K I +A G A+DS+G++Y WG G +QLG ILE
Sbjct: 209 DEIKIQKTPLKIKELKNIVQLAAGKDHLLALDSKGIVYAWGNGQQFQLGR----RILERH 264
Query: 468 K---IEGKQLNNYTVLQVASGGQH 488
+ +E +Q Y + +ASG H
Sbjct: 265 RYRALEPQQFGLYNIRYIASGDFH 288
>gi|452977561|gb|EME77327.1| hypothetical protein MYCFIDRAFT_146417 [Pseudocercospora fijiensis
CIRAD86]
Length = 505
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 186/403 (46%), Gaps = 63/403 (15%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYT 92
V G+G G+LGLG + ++ K L +L VV++ GGMH + LT+D K+ T
Sbjct: 68 VYVFGEGTAGELGLGTAKNCVDVKRPRLNPNLSAKDVGVVQIEAGGMHAIALTKDNKILT 127
Query: 93 WGCNDEGALGREAEGD-------------------------SEFIPQTVNLPK------- 120
WG ND+G LGR+ D E P V+ +
Sbjct: 128 WGVNDQGTLGRDTTWDGGLKDMDENASDSDSESGDDNGLNPKESTPGEVDWSQTQLAEGT 187
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIAS 179
+ V+++AGDS S L +DG VY WG+FR + G G E + P+ + ++ + I +
Sbjct: 188 RFVEVAAGDSTSFVLTDDGKVYGWGTFRSNDGIFGFTPEHKVATRPVLISNLKNVTTIRA 247
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
GA+H + + ++G + G +Q QLGR R R G+ E G +K I +
Sbjct: 248 GANHALAMDTKGAVYAWGSGQQNQLGR---RIVERTKAEGLIPREFGLPKGPKKGITSIS 304
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
TG Y++F IS G + A+GLNN+ + G D+ Q + P ++ +L K T +
Sbjct: 305 TGAYHSFAISRTGDVYAWGLNNFGETGIMDNAGQD--DAVIMNPRVVTALKGKNITTIKG 362
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGL-----------------KNVSEPVTEPTPIPSL 341
G HHSLA EG +GR D + G+ K+ + +P +P++
Sbjct: 363 GGHHSLAATEEGDCLIWGRIDGSQTGIAQSEIDSLTGAAIIKDEKDRPRILAQPYKVPAI 422
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
D +T +A + + I +G + WG YQ G G +DD+
Sbjct: 423 -DGAVTHVAAASDHNIVITKQGKAWSWGFSANYQTGQGTDDDV 464
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 164/406 (40%), Gaps = 101/406 (24%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-----RSASRNAR---------R 218
G+V+I +G H + LT +LT G +QG LGR T + NA
Sbjct: 105 GVVQIEAGGMHAIALTKDNKILTWGVNDQGTLGRDTTWDGGLKDMDENASDSDSESGDDN 164
Query: 219 GMSFLE--PGEVPLKRKHIDD------VFTGVYNTFI-SSKGSILAFGLNNYSQLGEADS 269
G++ E PGEV + + + V G +F+ + G + +G
Sbjct: 165 GLNPKESTPGEVDWSQTQLAEGTRFVEVAAGDSTSFVLTDDGKVYGWG------------ 212
Query: 270 EVQKSGNTCF-FTPH--------LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+S + F FTP LI +L K T + +G +H+LA++++G +YA+G
Sbjct: 213 -TFRSNDGIFGFTPEHKVATRPVLISNL--KNVTTIRAGANHALAMDTKGAVYAWGSGQQ 269
Query: 321 GRLGLKNVSEPVTE---PTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
+LG + V E P +P K ITSI+ G SFAI G +Y WG+ N +
Sbjct: 270 NQLGRRIVERTKAEGLIPREFGLPKGPKKGITSISTGAYHSFAISRTGDVYAWGLNNFGE 329
Query: 376 LG---NGKEDD--ILN--------------------------SEGKIYAFGRHDYGRLGL 404
G N +DD I+N EG +GR D + G+
Sbjct: 330 TGIMDNAGQDDAVIMNPRVVTALKGKNITTIKGGGHHSLAATEEGDCLIWGRIDGSQTGI 389
Query: 405 -----------------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
K+ + +P +P++ D +T +A + + I +G + W
Sbjct: 390 AQSEIDSLTGAAIIKDEKDRPRILAQPYKVPAI-DGAVTHVAAASDHNIVITKQGKAWSW 448
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G YQ G G +DD+ I+ + + +GGQ S+I A
Sbjct: 449 GFSANYQTGQGTDDDVKVATMIDNTAVREKKLNGATTGGQFSIITA 494
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 87/222 (39%), Gaps = 62/222 (27%)
Query: 282 PHLIKSLSDKKF--TMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEP 331
P L +LS K + +G H++AL + KI +G +D G LG LK++ E
Sbjct: 93 PRLNPNLSAKDVGVVQIEAGGMHAIALTKDNKILTWGVNDQGTLGRDTTWDGGLKDMDEN 152
Query: 332 VT---------------EPTPIPSLQDKT-------ITSIACGNCVSFAIDSEGVLYGWG 369
+ E TP +T +A G+ SF + +G +YGWG
Sbjct: 153 ASDSDSESGDDNGLNPKESTPGEVDWSQTQLAEGTRFVEVAAGDSTSFVLTDDGKVYGWG 212
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
F R + G G + T P I +L K +T+I
Sbjct: 213 T-----------------------F-RSNDGIFGFTPEHKVATRPVLISNL--KNVTTIR 246
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G + A+D++G +Y WG G QLG I+E K EG
Sbjct: 247 AGANHALAMDTKGAVYAWGSGQQNQLGR----RIVERTKAEG 284
>gi|432951688|ref|XP_004084886.1| PREDICTED: regulator of chromosome condensation-like, partial
[Oryzias latipes]
Length = 269
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 133/224 (59%), Gaps = 14/224 (6%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FL 223
P+K+ VKIASG DH V++T GNL T+GC EQGQLGR+ + ++R R+G+ L
Sbjct: 18 PVKIPIPEPAVKIASGNDHLVLVTRDGNLYTSGCAEQGQLGRVPEHFSNRGGRKGLERLL 77
Query: 224 EPGEVPLKRK-HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
P V LK K H D F G Y TF +S +G + FGL+NY QLG KS C F
Sbjct: 78 VPQMVKLKGKVHFIDAFCGAYFTFAVSQEGHVYGFGLSNYHQLG------TKSTKMC-FV 130
Query: 282 PHLIKSLSDKKFTML--ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P + + T + + GQHH+L L+SEG++Y+ GR +YGRLGL +E + PT +
Sbjct: 131 PVKLTCFKNSTTTWVDFSGGQHHTLCLDSEGQVYSLGRAEYGRLGLGQGAEEKSVPTAVT 190
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
++ ++CG VS+A+ EG +Y WGMG QLG G+EDD
Sbjct: 191 GVEPA--KGVSCGASVSYAVTREGSVYAWGMGTNLQLGTGEEDD 232
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 40/239 (16%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIPSLQDKT 345
+ASG H + + +G +Y G + G+LG + E + P +
Sbjct: 30 IASGNDHLVLVTRDGNLYTSGCAEQGQLGRVPEHFSNRGGRKGLERLLVPQMVKLKGKVH 89
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN--------------------------- 378
CG +FA+ EG +YG+G+ N +QLG
Sbjct: 90 FIDAFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKSTKMCFVPVKLTCFKNSTTTWVDFSG 149
Query: 379 GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G+ + L+SEG++Y+ GR +YGRLGL +E + PT + ++ ++CG VS+A
Sbjct: 150 GQHHTLCLDSEGQVYSLGRAEYGRLGLGQGAEEKSVPTAVTGVEPAK--GVSCGASVSYA 207
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ EG +Y WGMG QLG G+EDD P+K+ GKQL VL V+SGGQH+V+L K K
Sbjct: 208 VTREGSVYAWGMGTNLQLGTGEEDDEWGPVKMTGKQLEGREVLLVSSGGQHTVLLVKDK 266
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 44/260 (16%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE----------FIPQTVNL 118
+ V++ G H V +T DG +YT GC ++G LGR E S +PQ V L
Sbjct: 25 EPAVKIASGNDHLVLVTRDGNLYTSGCAEQGQLGRVPEHFSNRGGRKGLERLLVPQMVKL 84
Query: 119 PKKAVQISA--GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL----ESVS 172
K I A G + A+ ++G VY +G ++ +G K + P+KL S +
Sbjct: 85 KGKVHFIDAFCGAYFTFAVSQEGHVYGFG--LSNYHQLGTKSTKMCFVPVKLTCFKNSTT 142
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
V + G H + L S G + + G E G+LG + Q + ++ ++ +EP +
Sbjct: 143 TWVDFSGGQHHTLCLDSEGQVYSLGRAEYGRLG-LGQGAEEKSVPTAVTGVEPAK----- 196
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL--GEADSE---VQKSGNTCFFTPHLIK 286
V G ++ ++ +GS+ A+G+ QL GE D E V+ +G K
Sbjct: 197 ----GVSCGASVSYAVTREGSVYAWGMGTNLQLGTGEEDDEWGPVKMTG----------K 242
Query: 287 SLSDKKFTMLASGQHHSLAL 306
L ++ +++SG H++ L
Sbjct: 243 QLEGREVLLVSSGGQHTVLL 262
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G V + G+ + G+LGLG E+ V ++ V G + +T +G VY
Sbjct: 156 CLDSEGQVYSLGRAEYGRLGLGQGAEEKSVPTAVTGVEPAKGVSCGASVSYAVTREGSVY 215
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG E D E+ P V + K ++ +S+G H+V L++D
Sbjct: 216 AWGMGTNLQLGT-GEEDDEWGP--VKMTGKQLEGREVLLVSSGGQHTVLLVKD 265
>gi|384501453|gb|EIE91944.1| hypothetical protein RO3G_16655 [Rhizopus delemar RA 99-880]
Length = 413
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 192/372 (51%), Gaps = 49/372 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V CG D GQLG+ DV E+ + L+E L + V++ GGMH+V L +G +Y+WG
Sbjct: 32 GKVFVCGSNDAGQLGI-EDVEEKTSPVLLESLRSKDFVDIACGGMHSVALDSEGNLYSWG 90
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CNDE ALGR E E +P ++ K V+I+ GD+ ++AL E G VY+WG++R +GS
Sbjct: 91 CNDEQALGRAGE---EAVPLKIDCNDIKFVKIACGDNATLALSEQGNVYSWGTYRGDNGS 147
Query: 154 MGLKGEGI--QKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G E I QK PL + ++ IASGA+H + L S G + G QGQLGR T
Sbjct: 148 FGF-AEDIQHQKEPLLYPFLKDKIVIDIASGANHSLALCSNGRVYAWGYNGQGQLGRYTL 206
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
RR + L V L K++ + G Y++ ++ + A+GLNNY Q + D
Sbjct: 207 ------PRRPKASLCCDSVGL--KNVKMIGAGSYHSLAVTHNNELYAWGLNNYRQCVDVD 258
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGL 325
++ F P + + F +AS G+H S+ L +G +Y FGR D G+LGL
Sbjct: 259 -------DSFIFKPTRVP--LPEHFGTIASVQGGEHFSVILTLKGDVYTFGRGDAGQLGL 309
Query: 326 KNVS------EPV--------TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+ PV +PT +P Q T+T I+ G A + G ++ WG
Sbjct: 310 SRHTIDHLKVHPVGSTHSFYIPQPTKVPLSQ--TVTRISAGPEFVLARSACGEVFSWGFN 367
Query: 372 NGYQLGNGKEDD 383
+G+ +GN + +
Sbjct: 368 SGHAIGNRSDQN 379
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 171/407 (42%), Gaps = 78/407 (19%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTA 196
G V+ GS + G +G++ + +P+ LES+ V IA G H V L S GNL +
Sbjct: 32 GKVFVCGS--NDAGQLGIEDVEEKTSPVLLESLRSKDFVDIACGGMHSVALDSEGNLYSW 89
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY-----NTFISSKG 251
GC ++ LGR + + VPLK D F + +S +G
Sbjct: 90 GCNDEQALGRAGEEA----------------VPLKIDCNDIKFVKIACGDNATLALSEQG 133
Query: 252 SILAFGL---NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
++ ++G +N S D + QK P L L DK +ASG +HSLAL S
Sbjct: 134 NVYSWGTYRGDNGSFGFAEDIQHQKE-------PLLYPFLKDKIVIDIASGANHSLALCS 186
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G++YA+G + G+LG + S+ K + I G+ S A+ LY W
Sbjct: 187 NGRVYAWGYNGQGQLGRYTLPRRPKASLCCDSVGLKNVKMIGAGSYHSLAVTHNNELYAW 246
Query: 369 GMGNGYQL---------------------------GNGKEDDILNSEGKIYAFGRHDYGR 401
G+ N Q G IL +G +Y FGR D G+
Sbjct: 247 GLNNYRQCVDVDDSFIFKPTRVPLPEHFGTIASVQGGEHFSVILTLKGDVYTFGRGDAGQ 306
Query: 402 LGLKNVS------EPV--------TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
LGL + PV +PT +P Q T+T I+ G A + G ++ W
Sbjct: 307 LGLSRHTIDHLKVHPVGSTHSFYIPQPTKVPLSQ--TVTRISAGPEFVLARSACGEVFSW 364
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +G+ +GN + + P ++ +LQVA+GGQHS + +
Sbjct: 365 GFNSGHAIGNRSDQNEPTPCLVKCSHTMFVDILQVAAGGQHSAFITE 411
>gi|449267782|gb|EMC78684.1| Regulator of chromosome condensation, partial [Columba livia]
Length = 242
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 127/217 (58%), Gaps = 19/217 (8%)
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF-LEPGEVPLKRK----- 233
G DH VMLT G+LLT GC EQGQLGR+ A R RRG+ + L P VP++ K
Sbjct: 1 GNDHLVMLTVDGDLLTCGCGEQGQLGRVPAFFADRGGRRGLQYLLVPQRVPVRGKGNRGK 60
Query: 234 -HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--S 289
D F G Y TF ++ +G I FGL+NY QLG D+E C F+P + S
Sbjct: 61 MRFQDAFCGAYFTFAVAQEGHIYGFGLSNYHQLGTQDTE------PC-FSPQNLTCFKNS 113
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K + + GQHH++ ++SEGK Y+ GR +YGRLGL E + PT IP L I+S+
Sbjct: 114 TKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGAGVEEKSTPTVIPEL--PRISSV 171
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
ACG V +A+ S+G + WGMG YQL G+EDD+ +
Sbjct: 172 ACGASVGYAVSSDGRAFAWGMGTNYQLSTGEEDDVWS 208
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 36/243 (14%)
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
HL+ D G+ L G++ AF GR GL+ + P P +
Sbjct: 4 HLVMLTVDGDLLTCGCGEQGQL-----GRVPAFFADRGGRRGLQYLLVPQRVPVRGKGNR 58
Query: 343 DKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN----------------------- 378
K A CG +FA+ EG +YG+G+ N +QLG
Sbjct: 59 GKMRFQDAFCGAYFTFAVAQEGHIYGFGLSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWV 118
Query: 379 ----GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
G+ + ++SEGK Y+ GR +YGRLGL E + PT IP L I+S+ACG
Sbjct: 119 GFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGAGVEEKSTPTVIPEL--PRISSVACGAS 176
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
V +A+ S+G + WGMG YQL G+EDD+ P+++ GKQL N VL V+SGGQH+V+L
Sbjct: 177 VGYAVSSDGRAFAWGMGTNYQLSTGEEDDVWSPVEMTGKQLENRAVLAVSSGGQHTVLLV 236
Query: 494 KPK 496
+ K
Sbjct: 237 RDK 239
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HTVC+ +GK Y+ G + G LG A + + P + + ++ G S A+
Sbjct: 123 GQHHTVCVDSEGKAYSLGRAEYGRLGLGAGVEEKSTPTVIPELPRISSVACGASVGYAVS 182
Query: 137 EDGTVYAWG---SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
DG +AWG +++ S G ++ T +LE+ + ++ ++SG H V+L
Sbjct: 183 SDGRAFAWGMGTNYQLSTGEEDDVWSPVEMTGKQLENRA-VLAVSSGGQHTVLL 235
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG V E+ T ++ +L + V G ++ DG+ +
Sbjct: 129 CVDSEGKAYSLGRAEYGRLGLGAGVEEKSTPTVIPELPRISSVACGASVGYAVSSDGRAF 188
Query: 92 TW--GCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLED 138
W G N + + G E + S L +AV +S+G H+V L+ D
Sbjct: 189 AWGMGTNYQLSTGEEDDVWSPVEMTGKQLENRAVLAVSSGGQHTVLLVRD 238
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 55/260 (21%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE----------FIPQTV------NLPK 120
G H V LT DG + T GC ++G LGR ++ +PQ V N K
Sbjct: 1 GNDHLVMLTVDGDLLTCGCGEQGQLGRVPAFFADRGGRRGLQYLLVPQRVPVRGKGNRGK 60
Query: 121 KAVQIS-AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL----ESVSGIV 175
Q + G + A+ ++G +Y +G ++ +G + +P L S V
Sbjct: 61 MRFQDAFCGAYFTFAVAQEGHIYGFG--LSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWV 118
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKR 232
+ G H V + S G + G E G+LG + ++S P +P +
Sbjct: 119 GFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGAGVEEKST------------PTVIP-EL 165
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL--GEAD---SEVQKSGNTCFFTPHLIK 286
I V G + +SS G A+G+ QL GE D S V+ +G K
Sbjct: 166 PRISSVACGASVGYAVSSDGRAFAWGMGTNYQLSTGEEDDVWSPVEMTG----------K 215
Query: 287 SLSDKKFTMLASGQHHSLAL 306
L ++ ++SG H++ L
Sbjct: 216 QLENRAVLAVSSGGQHTVLL 235
>gi|426328672|ref|XP_004025374.1| PREDICTED: regulator of chromosome condensation [Gorilla gorilla
gorilla]
Length = 492
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 151/247 (61%), Gaps = 22/247 (8%)
Query: 149 DSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D++G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR
Sbjct: 219 DNNGVIGLL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 277
Query: 207 ITQRSASRNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGL 258
+ + A+R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL
Sbjct: 278 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 337
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFG 316
+NY QLG +E +CF P + S S K + + GQHH++ ++SEGK Y+ G
Sbjct: 338 SNYHQLGTPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLG 390
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
R +YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQL
Sbjct: 391 RAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQL 448
Query: 377 GNGKEDD 383
G G+++D
Sbjct: 449 GTGQDED 455
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 47/251 (18%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP 339
D +ASG H + L ++G +Y G + G+LG + E + P +
Sbjct: 242 DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV- 300
Query: 340 SLQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN--------------- 378
L+ + CG +FAI EG +YG+G+ N +QLG
Sbjct: 301 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSF 360
Query: 379 ------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L +
Sbjct: 361 KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAV 418
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SG
Sbjct: 419 SSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSG 478
Query: 486 GQHSVILAKPK 496
GQH+V+L K K
Sbjct: 479 GQHTVLLVKDK 489
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 50/280 (17%)
Query: 55 DVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE-----GD 108
+ M++ + LD VV+V G H V LT DG +YT GC ++G LGR E G
Sbjct: 228 EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGG 287
Query: 109 SE-----FIPQTVNLPKKAVQ-------ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ +P+ V L + + G + A+ +G VY +G ++ +G
Sbjct: 288 RQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL--SNYHQLGT 345
Query: 157 KGEGIQKTPLKLESVSGIVK----IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G P L S K + G H V + S G + G E G+LG + + +
Sbjct: 346 PGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG-LGEGAE 404
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLG-----E 266
++ +S L + V G + +K G + A+G+ QLG +
Sbjct: 405 EKSIPTLISRLP---------AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 455
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
A S V+ +G K L ++ ++SG H++ L
Sbjct: 456 AWSPVEMTG----------KQLENRVVLSVSSGGQHTVLL 485
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HTVC+ +GK Y+ G + G LG + + IP ++ ++ G S A+
Sbjct: 373 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVT 432
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEG---IQKTPLKLESVSGIVKIASGADHFVMLT 188
+DG V+AWG + G + ++ T +LE+ ++ ++SG H V+L
Sbjct: 433 KDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV-VLSVSSGGQHTVLLV 486
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 379 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 438
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 439 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 488
>gi|361125476|gb|EHK97517.1| putative protein pim1 [Glarea lozoyensis 74030]
Length = 524
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 194/443 (43%), Gaps = 86/443 (19%)
Query: 8 VLRKQAENPSQKVFVTSEAVPTLKCKTGGGV---------VLTCGQGDTGQLGLGPDVME 58
+ RK+A + +++V A P K K+ + V G GD+ +LGLG D
Sbjct: 73 ISRKRANSATEEV-----ARPVKKAKSEASINTAPTQKLDVYVFGSGDSAELGLG-DAKN 126
Query: 59 RKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA--------- 105
K L + LD VV++ VGGMH V LT D K+ TWG ND ALGR+
Sbjct: 127 VKRPRLNKFLDAATVGVVQIAVGGMHCVALTHDQKILTWGVNDNYALGRDTTWEAPTKDV 186
Query: 106 ----------------EGDSEFIP-QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
E IP + + Q++A +S S AL DG VY WG+F
Sbjct: 187 DADDSDEEEESDLNPNESKPTAIPTEAFESGTRFAQVAATNSASFALTTDGHVYGWGTFM 246
Query: 149 DSHGSMGL---------KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
+ G G K E Q TP + + I +A+G DH + L +GN+ G
Sbjct: 247 GNDGIFGFFKKDGEKQPKKERGQSTPALIPELKNIKSLAAGGDHILALDHKGNIWAWGAG 306
Query: 200 EQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
EQGQLG R+ + RR + +L P V L + + V +G YN F I +KG + +G
Sbjct: 307 EQGQLGHRVAE-------RRRLEYLVPNLVGLPKNKMTYVASGSYNGFAIDNKGKVWTWG 359
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
LNNY Q G + N P IKSL + G HHS+A +G +GR
Sbjct: 360 LNNYGQAGVTSG--AGTDNALVQRPSKIKSLEGYAIKGIEGGSHHSIAFTEDGTTLVWGR 417
Query: 318 HDYGRLGLKNVSEP--------------VTEPTPIPSLQDKTITSIACG--NCVSFAIDS 361
D G+ G+ P + +PT +P ++ ++A G NC+ A+
Sbjct: 418 CDDGQSGIDLDKIPEDDIIFDAREKPRILVKPTAVPGIKS---VAVAAGIDNCI--AVTM 472
Query: 362 EGVLYGWGMGNGYQLGNGKEDDI 384
EG Y WG Y+ G G D I
Sbjct: 473 EGQAYSWGFSESYRTGQGTTDSI 495
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 107/269 (39%), Gaps = 59/269 (21%)
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+R S E P+K+ + NT + K + FG + ++LG D++ K
Sbjct: 76 KRANSATEEVARPVKKAKSE----ASINTAPTQKLDVYVFGSGDSAELGLGDAKNVKR-- 129
Query: 277 TCFFTPHLIKSLSDKKF--TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P L K L +A G H +AL + KI +G +D LG E T+
Sbjct: 130 -----PRLNKFLDAATVGVVQIAVGGMHCVALTHDQKILTWGVNDNYALGRDTTWEAPTK 184
Query: 335 ---------------------PTPIPSLQDKTIT---SIACGNCVSFAIDSEGVLYGWG- 369
PT IP+ ++ T +A N SFA+ ++G +YGWG
Sbjct: 185 DVDADDSDEEEESDLNPNESKPTAIPTEAFESGTRFAQVAATNSASFALTTDGHVYGWGT 244
Query: 370 -MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
MGN I+ F + D + K + + P IP L K I S+
Sbjct: 245 FMGND----------------GIFGFFKKDGEKQPKKERGQ--STPALIPEL--KNIKSL 284
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
A G A+D +G ++ WG G QLG+
Sbjct: 285 AAGGDHILALDHKGNIWAWGAGEQGQLGH 313
>gi|429850121|gb|ELA25421.1| ran exchange factor prp20 pim1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 430
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 191/418 (45%), Gaps = 67/418 (16%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
+ + PS + TS PT K V G G+ +LGLGP R T A L+ +
Sbjct: 24 KPKQPSPRPSSTSR--PTTKLD-----VFVIGSGENSELGLGP----RHTQAPRPRLNRL 72
Query: 72 VEV--------VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-------------- 109
++ VGGMH V LT DGKV TWG ND+GALGR
Sbjct: 73 LDADSVGVVQVAVGGMHCVALTHDGKVLTWGVNDDGALGRVKSTSKSEAEAEEDEEDILN 132
Query: 110 --EFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT- 164
E P+ VN ++ VQ++A +S AL G VY WGSF G+ G E KT
Sbjct: 133 PFESTPEAVNFEEEIDVVQVAATNSAGFALTAAGKVYGWGSFAGGDGNFGFLREKPPKTT 192
Query: 165 ---PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
P+ + ++ I ++A G+DH + LT+ GN+ G EQ +LGR ARR
Sbjct: 193 ERLPVLIPGLTDIKELAGGSDHILALTNDGNVFAWGSGEQNELGRRIL------ARRRFE 246
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P V L + +F G +++F I + G + AFGLNN+ Q G + E +G T
Sbjct: 247 TLVPQRVGLPKNKTAKIFAGSHHSFAIDTTGKVWAFGLNNFGQCGISTRE--DTGFTTVI 304
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------- 331
+P +IKSL K + G HH++A EG++ +GR D G++G+ + P
Sbjct: 305 SPTVIKSLEGYKVRHIGCGLHHTVACTEEGEVLVWGRADDGQMGMPLETLPEDHIIFDSR 364
Query: 332 -----VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ P +P L+ + NC + I EG ++ WG Y G D +
Sbjct: 365 DRPRVLNVPAVVPDLK-AVFVAAGIDNC--YTISKEGEMHAWGFSASYNTGLATTDTV 419
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 143/374 (38%), Gaps = 70/374 (18%)
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMG-LKGEG----------------IQKTP--LKLESV 171
H VAL DG V WG D G++G +K + TP + E
Sbjct: 89 HCVALTHDGKVLTWGVNDD--GALGRVKSTSKSEAEAEEDEEDILNPFESTPEAVNFEEE 146
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPE--QGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V++A+ LT+ G + G G G + ++ R + L PG
Sbjct: 147 IDVVQVAATNSAGFALTAAGKVYGWGSFAGGDGNFGFLREKPPKTTER--LPVLIPGLTD 204
Query: 230 LKR-----KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
+K HI +++ G++ A+G ++LG + P
Sbjct: 205 IKELAGGSDHI---------LALTNDGNVFAWGSGEQNELGR---RILARRRFETLVPQR 252
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP----VTEPTPIPS 340
+ L K + +G HHS A+++ GK++AFG +++G+ G+ + V PT I S
Sbjct: 253 V-GLPKNKTAKIFAGSHHSFAIDTTGKVWAFGLNNFGQCGISTREDTGFTTVISPTVIKS 311
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDDILNSEGKIYAFGR 396
L+ + I CG + A EG + WG + Q+G ED I+ F
Sbjct: 312 LEGYKVRHIGCGLHHTVACTEEGEVLVWGRADDGQMGMPLETLPEDHII--------FDS 363
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
D R+ + P +P L+ + NC + I EG ++ WG Y G
Sbjct: 364 RDRPRV--------LNVPAVVPDLK-AVFVAAGIDNC--YTISKEGEMHAWGFSASYNTG 412
Query: 457 NGKEDDILEPMKIE 470
D + P +
Sbjct: 413 LATTDTVKTPTLVR 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 48/264 (18%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSG----------NTCFFTPHLIKSLSDKKFTML 296
++ G +L +G+N+ LG S + N TP + + +
Sbjct: 93 LTHDGKVLTWGVNDDGALGRVKSTSKSEAEAEEDEEDILNPFESTPEAVNFEEEIDVVQV 152
Query: 297 ASGQHHSLALNSEGKIYAFGRHD--YGRLGLKNVSEPVTE---PTPIPSLQDKTITSIAC 351
A+ AL + GK+Y +G G G P T P IP L D I +A
Sbjct: 153 AATNSAGFALTAAGKVYGWGSFAGGDGNFGFLREKPPKTTERLPVLIPGLTD--IKELAG 210
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G+ A+ ++G ++ WG G +LG +I A R + L + V P
Sbjct: 211 GSDHILALTNDGNVFAWGSGEQNELGR-----------RILA--RRRFETLVPQRVGLP- 256
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEP 466
++KT I G+ SFAID+ G ++ +G+ N Q G +D ++ P
Sbjct: 257 ---------KNKT-AKIFAGSHHSFAIDTTGKVWAFGLNNFGQCGISTREDTGFTTVISP 306
Query: 467 MKIEGKQLNNYTVLQVASGGQHSV 490
I K L Y V + G H+V
Sbjct: 307 TVI--KSLEGYKVRHIGCGLHHTV 328
>gi|354548475|emb|CCE45211.1| hypothetical protein CPAR2_702230 [Candida parapsilosis]
Length = 493
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 192/404 (47%), Gaps = 60/404 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
+ G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 54 IFVWGTGSMCELGLGPAANTKEVKRPRLNPYLTEERLGGTKIVDFAVGGMHTLALDGKNR 113
Query: 90 VYTWGCNDEGALGREA-------------EGDSE-----------FIPQTVNLPKKAVQI 125
V++WG ND G LGR+ E D E + Q +++ + VQ+
Sbjct: 114 VWSWGNNDSGVLGRDTSHSKQVLKDLDAPESDDEDGDLNEAESTPSLVQGLDVKDQIVQL 173
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADH 183
A D+ S LL +G VYAWG FR + G +G + I Q+TP+++ + IV++A+G DH
Sbjct: 174 IATDNLSAVLLSNGDVYAWGCFRCNEGLLGFLRDEIKLQRTPMRIAELKNIVQLAAGKDH 233
Query: 184 FVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
+ L S+G + G +Q QLGR I +R R+ LEP + L +I V +G
Sbjct: 234 ILALDSKGIVSAWGNGQQFQLGRRIMERHRLRS-------LEPQQFGLY--NIRYVASGD 284
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
Y+ F I + A+GLN + Q S + + P LI L D + +A G+H
Sbjct: 285 YHCFAIDHNDQVYAWGLNQFGQCALTGSNGELEDGSILMKPTLIPELCDLEIKQIAGGEH 344
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-------EPTPIPSL-------QDKTIT 347
H+LAL +G++ A+GR+D +G+ P + +P +PS D I
Sbjct: 345 HTLALTGDGRVLAWGRYDMKEVGIPENELPKSTYKDQHGKPRSVPSPTRLRFGNDDVKIK 404
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
++ G+ SFA+ +G +Y WG Y G G DD ++ +I
Sbjct: 405 TVGAGSHHSFAVTEDGFVYSWGFSETYAPGLGNLDDDVDKPTRI 448
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 61/265 (23%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLALNSEGK 311
I +G + +LG + K P+L + L K A G H+LAL+ + +
Sbjct: 54 IFVWGTGSMCELGLGPAANTKEVKRPRLNPYLTEERLGGTKIVDFAVGGMHTLALDGKNR 113
Query: 312 IYAFGRHDYGRLG---------LKNVSEP--------VTEPTPIPSL------QDKTITS 348
++++G +D G LG LK++ P + E PSL +D+ +
Sbjct: 114 VWSWGNNDSGVLGRDTSHSKQVLKDLDAPESDDEDGDLNEAESTPSLVQGLDVKDQIVQL 173
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG--RHDYGRLGLKN 406
IA N + +L S G +YA+G R + G LG
Sbjct: 174 IATDNLSA---------------------------VLLSNGDVYAWGCFRCNEGLLGFLR 206
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
E + TP+ + K I +A G A+DS+G++ WG G +QLG I+E
Sbjct: 207 -DEIKLQRTPMRIAELKNIVQLAAGKDHILALDSKGIVSAWGNGQQFQLGR----RIMER 261
Query: 467 MK---IEGKQLNNYTVLQVASGGQH 488
+ +E +Q Y + VASG H
Sbjct: 262 HRLRSLEPQQFGLYNIRYVASGDYH 286
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 52/275 (18%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK---------------SGNT 277
K +D G++ + K + ++G N+ LG S ++ N
Sbjct: 94 KIVDFAVGGMHTLALDGKNRVWSWGNNDSGVLGRDTSHSKQVLKDLDAPESDDEDGDLNE 153
Query: 278 CFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE 334
TP L++ L K + L + + S L S G +YA+G R + G LG E +
Sbjct: 154 AESTPSLVQGLDVKDQIVQLIATDNLSAVLLSNGDVYAWGCFRCNEGLLGFLR-DEIKLQ 212
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
TP+ + K I +A G A+DS+G++ WG G +QLG +
Sbjct: 213 RTPMRIAELKNIVQLAAGKDHILALDSKGIVSAWGNGQQFQLGRRIMERHRLRSLEPQQF 272
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQ 421
++ ++YA+G + +G+ L + + +PT IP L
Sbjct: 273 GLYNIRYVASGDYHCFAIDHNDQVYAWGLNQFGQCALTGSNGELEDGSILMKPTLIPELC 332
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
D I IA G + A+ +G + WG + ++G
Sbjct: 333 DLEIKQIAGGEHHTLALTGDGRVLAWGRYDMKEVG 367
>gi|358370655|dbj|GAA87266.1| Ran exchange factor Prp20/Pim1 [Aspergillus kawachii IFO 4308]
Length = 571
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 202/434 (46%), Gaps = 79/434 (18%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVMERKT 61
+V + + P KV + PT + V CG+G +G+LGLG DV +
Sbjct: 126 RVAKPRVTKPKPKVVINH--APTTRLN-----VYVCGEGSSGELGLGSAKNAIDVKRPRL 178
Query: 62 FA-LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI-------- 112
A L D VV+V VGGMH V LT D K+ TWG ND+GALGR+ D +
Sbjct: 179 NANLPADRVGVVQVAVGGMHCVALTYDNKILTWGVNDQGALGRDTTWDGGYKDMDKADNE 238
Query: 113 ------------PQTVN---LPKKA-------VQISAGDSHSVALLEDGTVYAWGSFRDS 150
P N +P +A V+++AGDS S AL +DG VY WG+FR +
Sbjct: 239 SDSDSDDDIALNPHESNPTAIPSEAFPKDTVFVEVAAGDSSSFALTDDGQVYGWGTFRSN 298
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +G +Q TP + S+ I +A G +H + L +G + + G +Q QLGR
Sbjct: 299 DGILGFDATNKVQLTPSLIPSLKKIKHLACGDNHVLALNEKGAVFSWGSGQQNQLGR--- 355
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL---- 264
R RN G L+P E L K+I + G +++F + G + A+GLN++ +
Sbjct: 356 RIIERNRLNG---LQPREFGLP-KNIVHIGCGAFHSFAVHQSGEVYAWGLNSFGETGIRA 411
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D E P ++SLS K T + G HHSLA+ G+ +GR D + G
Sbjct: 412 GAGDDEA------AIVHPTAVESLSGKAVTQICGGAHHSLAIADNGECLVWGRLDGYQTG 465
Query: 325 LKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
LK S P + EP +P ++ T +A G+ S ID +G + WG
Sbjct: 466 LKIDSLPEDAVIKDERGRPRILIEPKAVPGVKANT---VAAGSDHSLVIDVDGRPWSWGF 522
Query: 371 GNGYQLGNGKEDDI 384
YQ G G DDI
Sbjct: 523 SATYQTGQGTPDDI 536
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 62/223 (27%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVTE-----------------PT 336
H +AL + KI +G +D G LG K++ + E PT
Sbjct: 198 HCVALTYDNKILTWGVNDQGALGRDTTWDGGYKDMDKADNESDSDSDDDIALNPHESNPT 257
Query: 337 PIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
IPS +D +A G+ SFA+ +G +YGWG
Sbjct: 258 AIPSEAFPKDTVFVEVAAGDSSSFALTDDGQVYGWGTF---------------------- 295
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
R + G LG ++ P+ IPSL K I +ACG+ A++ +G ++ WG G
Sbjct: 296 --RSNDGILGFDATNKVQLTPSLIPSL--KKIKHLACGDNHVLALNEKGAVFSWGSGQQN 351
Query: 454 QLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQHSVIL 492
QLG I+E ++ G Q + ++ + G HS +
Sbjct: 352 QLGR----RIIERNRLNGLQPREFGLPKNIVHIGCGAFHSFAV 390
>gi|224167221|ref|XP_002198843.1| PREDICTED: regulator of chromosome condensation-like, partial
[Taeniopygia guttata]
Length = 241
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 126/215 (58%), Gaps = 19/215 (8%)
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLKRK------H 234
DH VMLT G+L T GC EQGQLGR+ ASR R+G+ L P VP++ K
Sbjct: 2 DHLVMLTVDGDLFTCGCGEQGQLGRVPALFASRGGRKGLQRMLVPQLVPVRGKGRRSKMR 61
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDK 291
D F G Y TF ++ +G I FGL+NY QLG D+E C F+P + S K
Sbjct: 62 FQDAFCGAYFTFAVTHEGHIYGFGLSNYHQLGTQDTE------PC-FSPRNLTCFKNSTK 114
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ + GQHH++ ++SEGK Y+ GR +YGRLGL +E + PT IP L I S+AC
Sbjct: 115 SWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPEL--PRIISVAC 172
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
G V +A+ S+G + WGMG YQLG G+EDD+ +
Sbjct: 173 GASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWS 207
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 120/243 (49%), Gaps = 36/243 (14%)
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
HL+ D G+ L G++ A GR GL+ + P P +
Sbjct: 3 HLVMLTVDGDLFTCGCGEQGQL-----GRVPALFASRGGRKGLQRMLVPQLVPVRGKGRR 57
Query: 343 DKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN----------------------- 378
K A CG +FA+ EG +YG+G+ N +QLG
Sbjct: 58 SKMRFQDAFCGAYFTFAVTHEGHIYGFGLSNYHQLGTQDTEPCFSPRNLTCFKNSTKSWV 117
Query: 379 ----GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
G+ + ++SEGK Y+ GR +YGRLGL +E + PT IP L I S+ACG
Sbjct: 118 GFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPEL--PRIISVACGAS 175
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
V +A+ S+G + WGMG YQLG G+EDD+ P+++ GKQL N VL V+SGGQH+V+L
Sbjct: 176 VGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRQVLAVSSGGQHTVLLV 235
Query: 494 KPK 496
K
Sbjct: 236 SDK 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 29/193 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERK------TFALVEDLDNVV-----------EVVVGGM 79
G + TCG G+ GQLG P + + LV L V + G
Sbjct: 11 GDLFTCGCGEQGQLGRVPALFASRGGRKGLQRMLVPQLVPVRGKGRRSKMRFQDAFCGAY 70
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTV----NLPKKAVQISAGDSHSV 133
T +T +G +Y +G ++ LG + D+E F P+ + N K V S G H+V
Sbjct: 71 FTFAVTHEGHIYGFGLSNYHQLGTQ---DTEPCFSPRNLTCFKNSTKSWVGFSGGQHHTV 127
Query: 134 ALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
+ +G Y+ G R +G +GL G + TP + + I+ +A GA ++S G
Sbjct: 128 CVDSEGKAYSLG--RAEYGRLGLGTGAEEKSTPTVIPELPRIISVACGASVGYAVSSDGR 185
Query: 193 LLTAGCPEQGQLG 205
G QLG
Sbjct: 186 AFAWGMGTNYQLG 198
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HTVC+ +GK Y+ G + G LG + + P + + + ++ G S A+
Sbjct: 122 GQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRIISVACGASVGYAVS 181
Query: 137 EDGTVYAWG---SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
DG +AWG +++ G ++ T +LE+ ++ ++SG H V+L S
Sbjct: 182 SDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRQ-VLAVSSGGQHTVLLVS 236
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ T ++ +L ++ V G ++ DG+ +
Sbjct: 128 CVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRIISVACGASVGYAVSSDGRAF 187
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG E D + V + K ++ +S+G H+V L+ D
Sbjct: 188 AWGMGTNYQLGTGEEDD---VWSPVEMTGKQLENRQVLAVSSGGQHTVLLVSD 237
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 99/256 (38%), Gaps = 47/256 (18%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGR-----EAEGDSE-----FIPQTVNLPKKAVQIS--- 126
H V LT DG ++T GC ++G LGR + G + +PQ V + K +
Sbjct: 3 HLVMLTVDGDLFTCGCGEQGQLGRVPALFASRGGRKGLQRMLVPQLVPVRGKGRRSKMRF 62
Query: 127 ----AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL----ESVSGIVKIA 178
G + A+ +G +Y +G ++ +G + +P L S V +
Sbjct: 63 QDAFCGAYFTFAVTHEGHIYGFG--LSNYHQLGTQDTEPCFSPRNLTCFKNSTKSWVGFS 120
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G H V + S G + G E G+LG T P +P + I
Sbjct: 121 GGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKST---------PTVIPELPRIISVA 171
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEAD-----SEVQKSGNTCFFTPHLIKSLSDKKF 293
+SS G A+G+ QLG + S V+ +G K L +++
Sbjct: 172 CGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTG----------KQLENRQV 221
Query: 294 TMLASGQHHSLALNSE 309
++SG H++ L S+
Sbjct: 222 LAVSSGGQHTVLLVSD 237
>gi|145504819|ref|XP_001438376.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405548|emb|CAK70979.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 60/435 (13%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNLPKKAVQISAG 128
++V+V GGMH + LT GKVY++GC+D+G LGR + EG +P + I+ G
Sbjct: 48 SIVQVACGGMHALILTSQGKVYSFGCDDKGVLGRPQVEGQDARLPDLITDLPPVDMIACG 107
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVML 187
SHS+A G VY WG + ++HG + G+ + + P K+++++ GI KI G +H ++L
Sbjct: 108 SSHSIAANSYGLVYFWGFYANTHGPI---GDAVSR-PKKVDNITNGIKKILCGQNHTMVL 163
Query: 188 TSRGNLLTAGCPEQGQLGRI--TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
LLT G E +GR T+RS +N L P + +KR I D+FTG +
Sbjct: 164 LDNFKLLTWGDAETLVIGRKSETRRSVIQN-------LNPQPIKMKRPII-DIFTGASHA 215
Query: 246 FIS-----SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
F+ +K I +GLNNY QLG + E Q+ P LI+ + + G+
Sbjct: 216 FVKVLLKDNKPGIYGWGLNNYGQLGIGNQENQQ-------LPCLIEYFENMDIVDMVGGE 268
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HH++AL+ +G +Y+FGR+D G+LGL E + E I + + + +
Sbjct: 269 HHTIALDFKGNVYSFGRNDDGQLGL---GEQLNENLRIEAEKQRVL-------------- 311
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
E LY Q N K+ N +G ++ + +G + ++ P IP +
Sbjct: 312 -EEELY------QQQQVNRKKTSKKNKQGDLFEVQKSQ-KVIGYEFITTPQMIGN-IPKM 362
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
Q SI ++AI + ++ WG G Y LG E+ +P ++ N +L
Sbjct: 363 Q-----SIFASMHYNYAISQQKQIFSWGNGQSYVLGTRNENSQYQPKEVTAI-FKNEKLL 416
Query: 481 QVASGGQHSVILAKP 495
Q++ G H + L P
Sbjct: 417 QISLGASHVIALTSP 431
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPS 340
P+ +K LS+ +A G H+L L S+GK+Y+FG D G LG V + P I
Sbjct: 38 PYHLKELSNLSIVQVACGGMHALILTSQGKVYSFGCDDKGVLGRPQVEGQDARLPDLITD 97
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--LGNG-----KEDDILNSEGKIYA 393
L + IACG+ S A +S G++Y WG +G+ K D+I N KI
Sbjct: 98 L--PPVDMIACGSSHSIAANSYGLVYFWGFYANTHGPIGDAVSRPKKVDNITNGIKKILC 155
Query: 394 FGRH--------------DYGRLGLKNVSEP----VTEPTPIPSLQDKTITSIACGNCVS 435
H D L + SE + P P + I I G +
Sbjct: 156 GQNHTMVLLDNFKLLTWGDAETLVIGRKSETRRSVIQNLNPQPIKMKRPIIDIFTGASHA 215
Query: 436 FA----IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
F D++ +YGWG+ N QLG G +++ P IE N ++ + G H++
Sbjct: 216 FVKVLLKDNKPGIYGWGLNNYGQLGIGNQENQQLPCLIE--YFENMDIVDMVGGEHHTIA 273
Query: 492 L 492
L
Sbjct: 274 L 274
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 41/322 (12%)
Query: 65 VEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI----PQTVNLP 119
V+++ N + +++ G HT+ L ++ K+ TWG + +GR++E I PQ + +
Sbjct: 143 VDNITNGIKKILCGQNHTMVLLDNFKLLTWGDAETLVIGRKSETRRSVIQNLNPQPIKMK 202
Query: 120 KKAVQISAGDSHSV--ALLEDGT--VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-- 173
+ + I G SH+ LL+D +Y WG +++G +G+ + Q+ P +E
Sbjct: 203 RPIIDIFTGASHAFVKVLLKDNKPGIYGWG--LNNYGQLGIGNQENQQLPCLIEYFENMD 260
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-RNARRGMSFLEPGEVPLKR 232
IV + G H + L +GN+ + G + GQLG Q + + R LE E ++
Sbjct: 261 IVDMVGGEHHTIALDFKGNVYSFGRNDDGQLGLGEQLNENLRIEAEKQRVLE--EELYQQ 318
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS----GNTCFFTPHLIKSL 288
+ ++ T N +G + EVQKS G TP +I ++
Sbjct: 319 QQVNRKKTSKKN----KQGDLF---------------EVQKSQKVIGYEFITTPQMIGNI 359
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
K + + H++ A++ + +I+++G LG +N + +++ +
Sbjct: 360 P--KMQSIFASMHYNYAISQQKQIFSWGNGQSYVLGTRNENSQYQPKEVTAIFKNEKLLQ 417
Query: 349 IACGNCVSFAIDSEGVLYGWGM 370
I+ G A+ S + M
Sbjct: 418 ISLGASHVIALTSPDQTFQLSM 439
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 149/366 (40%), Gaps = 47/366 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G D G LG P V + + L+ DL V + G H++ G VY
Sbjct: 63 TSQGKVYSFGCDDKGVLG-RPQVEGQDARLPDLITDLPPVDMIACGSSHSIAANSYGLVY 121
Query: 92 TWG--CNDEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG N G + GD+ P+ V N+ +I G +H++ LL++ + WG
Sbjct: 122 FWGFYANTHGPI-----GDAVSRPKKVDNITNGIKKILCGQNHTMVLLDNFKLLTWGDAE 176
Query: 149 DSHGSMGLKGE-------GIQKTPLKLESVSGIVKIASGADH-FVMLTSRGN---LLTAG 197
+G K E + P+K++ I+ I +GA H FV + + N + G
Sbjct: 177 TL--VIGRKSETRRSVIQNLNPQPIKMK--RPIIDIFTGASHAFVKVLLKDNKPGIYGWG 232
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
GQLG Q + + + E + I D+ G ++T + KG++ +F
Sbjct: 233 LNNYGQLGIGNQENQQLPCL--IEYFENMD-------IVDMVGGEHHTIALDFKGNVYSF 283
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N+ QLG + + + L ++ + + + N +G ++
Sbjct: 284 GRNDDGQLGLGE----QLNENLRIEAEKQRVLEEELYQQQQVNRKKTSKKNKQGDLFEVQ 339
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ +G + ++ P IP +Q SI ++AI + ++ WG G Y L
Sbjct: 340 KSQ-KVIGYEFITTPQMIGN-IPKMQ-----SIFASMHYNYAISQQKQIFSWGNGQSYVL 392
Query: 377 GNGKED 382
G E+
Sbjct: 393 GTRNEN 398
>gi|322701288|gb|EFY93038.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium acridum CQMa
102]
Length = 576
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 220/514 (42%), Gaps = 96/514 (18%)
Query: 39 VLTCGQGDTGQLGLG--------PDVMERKTFA-LVEDLD-NVVEVVVGGMHTVCLTEDG 88
+ G G+ G+LGLG P R L+ D +V+V VG +H LT DG
Sbjct: 99 ITVFGSGENGELGLGNKSHNNKSPTKANRPRLNHLLNAADIGIVQVAVGSVHCAALTHDG 158
Query: 89 KVYTWGCNDEGALGREAEGDS--------------EFIPQTV----NLPKKAVQISAGDS 130
+V TWG ND ALGR + + E P NL Q++A D+
Sbjct: 159 RVLTWGVNDSRALGRNTKCEPLAQPDGGVTNLNPLESTPAPAEGLENLGSDITQVAATDN 218
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGI------------QKTPLKLESVSGIVKIA 178
+ L G VY WG+F S G G E + Q TP+++ + I K++
Sbjct: 219 ATFVLTRSGLVYGWGTFFGSDGVYGFLREKMRPKKKSKYKERFQVTPIQIGGLKDIKKLS 278
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+G +H + LT G++ G +Q +LG R+ QR L P V L RK I +
Sbjct: 279 AGGNHVLALTESGDVYAWGSGQQAELGRRLVQRHQ-------FESLIPRMVDLPRKGIVE 331
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
F G ++F I G + +GLNN+ Q G A +E N TP +I+ L K +
Sbjct: 332 AFAGFNHSFAIDKDGQVWTWGLNNFGQTGLAANEE----NLHVGTPTVIQGLRGYKIRHM 387
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQ 342
A G HSLA +G++ A+GR D ++G+ + P + +PT IP +
Sbjct: 388 AGGFQHSLACTEDGEVLAWGRCDNSQVGIDVSALPREHVLCDSRGRPRILLQPTIIPGI- 446
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
T T +A G SFAI EG + WG + G G + I
Sbjct: 447 --TATLVAAGIDNSFAITPEGKVLTWGYSENCRAGQGADTTI------------------ 486
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
E TE T ++ T T +A G SFAI EG + WG + G G +
Sbjct: 487 ------ETPTELTG-KAVSGITATLVAAGIDNSFAITPEGKVLTWGYSENCRAGQGADTT 539
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
I P ++ GK ++ + A GQ S+I A P+
Sbjct: 540 IETPTELTGKAVSGKSFTFAACRGQFSLI-ASPR 572
>gi|398404986|ref|XP_003853959.1| hypothetical protein MYCGRDRAFT_39112 [Zymoseptoria tritici IPO323]
gi|339473842|gb|EGP88935.1| hypothetical protein MYCGRDRAFT_39112 [Zymoseptoria tritici IPO323]
Length = 574
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 177/404 (43%), Gaps = 63/404 (15%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G+G G+LGLG DV R L D VVE+ GGMH V LT D K+ T
Sbjct: 145 VYVFGEGTAGELGLGTAKSAVDVKRPRLNPNLKADTVGVVEIAAGGMHCVALTHDNKILT 204
Query: 93 WGCNDEGALGREAEGD-------------------------SEFIPQTVNLPK------- 120
WG ND+G LGR+ D E P V+ +
Sbjct: 205 WGVNDQGTLGRDTTWDGGLRDMDAAAEDSDSDDDDDNGLNPKESTPGEVDWSQTELAEGT 264
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIAS 179
+ VQ++AGDS S L +DG VY WG+FR + G G E I + P+ + + I I +
Sbjct: 265 RFVQVAAGDSTSFVLTDDGKVYGWGTFRSNDGVFGFSPEVHIAERPILVSGLKKITSIKA 324
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
GA+H + + + G + G +Q QLGR R R G+ E G +K I +
Sbjct: 325 GANHALAMDTTGAVFAWGSGQQNQLGR---RVIERTKTEGLHPREFGLPKGAKKGITSIE 381
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
TG Y++F IS G + A+GLNN+ + G D+ Q + P + SL K +
Sbjct: 382 TGGYHSFAISKTGDVYAWGLNNFGETGIMDNAGQD--DAVIVNPRQVPSLKGKDLISIKG 439
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKN-----------------VSEPVTEPTPIPSL 341
G HHSLA +EG +GR D + G + EP I ++
Sbjct: 440 GGHHSLAATAEGDCLIWGRIDGNQTGFTKDELNKMPDEVIIKDEHGAMRIIKEPQKISAI 499
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ K + + + + I EG + WG YQ G G +DD++
Sbjct: 500 KGK-VVQVTTSSDNNIVITDEGKAWSWGFSANYQTGLGTDDDVI 542
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 86/237 (36%), Gaps = 68/237 (28%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVT-------------- 333
+A+G H +AL + KI +G +D G LG L+++
Sbjct: 186 IAAGGMHCVALTHDNKILTWGVNDQGTLGRDTTWDGGLRDMDAAAEDSDSDDDDDNGLNP 245
Query: 334 -EPTPIPSLQDKT-------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
E TP +T +A G+ SF + +G +YGWG
Sbjct: 246 KESTPGEVDWSQTELAEGTRFVQVAAGDSTSFVLTDDGKVYGWGT--------------- 290
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
F R + G G P + L K ITSI G + A+D+ G ++
Sbjct: 291 --------F-RSNDGVFGFSPEVHIAERPILVSGL--KKITSIKAGANHALAMDTTGAVF 339
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY--------TVLQVASGGQHSVILAK 494
WG G QLG ++E K EG + + + +GG HS ++K
Sbjct: 340 AWGSGQQNQLGR----RVIERTKTEGLHPREFGLPKGAKKGITSIETGGYHSFAISK 392
>gi|449549966|gb|EMD40931.1| hypothetical protein CERSUDRAFT_111512 [Ceriporiopsis subvermispora
B]
Length = 548
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 196/418 (46%), Gaps = 79/418 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVM-----ERKTFALVEDLDNVV---------EVVVGGMHTVCL 84
+ G G+ GQ G+GPD + R+ + E + V V GGMHT+ +
Sbjct: 115 LFVWGTGNFGQFGMGPDYLAEFEKPRRNMWVEEQIKEGVFGKPDAGLESVAAGGMHTLFI 174
Query: 85 TEDGKVYTWGCNDEGALGR------EAEGDSEFIP-----------QT-VNLPKKAVQIS 126
E G V++ G ND+ ALGR E EFI QT V+ +AV+I+
Sbjct: 175 DEKGTVWSCGTNDDAALGRVTTDVPNPEKPDEFIDIDTLTAVPHPLQTLVDEKFRAVRIA 234
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGL----KGEGIQKTPLKLESVSG----IVKIA 178
AGDS S A+ +G + AWGSFR G +G K + I L+L S G V +A
Sbjct: 235 AGDSISAAISTEGELRAWGSFRGVEGLLGFSSGHKHQFIPAPILELPSKPGDTEKFVSVA 294
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G +H ++LT+ GN+ T G EQGQLGR RR + P ++ L + V
Sbjct: 295 AGNNHLLVLTTHGNVYTWGAGEQGQLGRKVLE------RRKIHGTVPEKIVLGSRSHKAV 348
Query: 239 FTGV--YNTF-ISSKGSILAFGLNNYSQLG------EADSEVQKSGNTCFFTPHLIKSLS 289
G Y +F + KG + A+GLNN Q G AD+EVQ P ++ LS
Sbjct: 349 IVGAGNYTSFAVDEKGVVWAWGLNNMGQTGTGFTSLAADAEVQ--------LPKRVRGLS 400
Query: 290 DKKF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTE 334
++ +A G+HH+L L GK+YA GR D G+LG++ SE + E
Sbjct: 401 KEELGGEDYVVQIAGGEHHTLFLTKAGKVYACGRSDGGQLGIEKDSEAFEESDFPDMLAE 460
Query: 335 PTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
PT +P D + I+ G + A+ G LY WG G +LG ED++ G +
Sbjct: 461 PTLVPFPDDDDPVVFISAGIKSNIAVTEGGALYSWGTGPSGELGLAGEDEVATPTGVV 518
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 169/394 (42%), Gaps = 77/394 (19%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
+G+ +A+G H + + +G + + G + LGR+T + N + F++ +
Sbjct: 159 AGLESVAAGGMHTLFIDEKGTVWSCGTNDDAALGRVT--TDVPNPEKPDEFIDIDTLTAV 216
Query: 229 --PLKRKHIDDVFTGV-------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
PL+ +D+ F V + IS++G + A+G S G SG+
Sbjct: 217 PHPLQ-TLVDEKFRAVRIAAGDSISAAISTEGELRAWG----SFRGVEGLLGFSSGHKHQ 271
Query: 280 FTPHLIKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NVS 329
F P I L K KF +A+G +H L L + G +Y +G + G+LG K +
Sbjct: 272 FIPAPILELPSKPGDTEKFVSVAAGNNHLLVLTTHGNVYTWGAGEQGQLGRKVLERRKIH 331
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---------- 379
V E + S K + + GN SFA+D +GV++ WG+ N Q G G
Sbjct: 332 GTVPEKIVLGSRSHKAVI-VGAGNYTSFAVDEKGVVWAWGLNNMGQTGTGFTSLAADAEV 390
Query: 380 ---------------KEDDI------------LNSEGKIYAFGRHDYGRLGLKNVSEP-- 410
ED + L GK+YA GR D G+LG++ SE
Sbjct: 391 QLPKRVRGLSKEELGGEDYVVQIAGGEHHTLFLTKAGKVYACGRSDGGQLGIEKDSEAFE 450
Query: 411 -------VTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
+ EPT +P D + I+ G + A+ G LY WG G +LG ED+
Sbjct: 451 ESDFPDMLAEPTLVPFPDDDDPVVFISAGIKSNIAVTEGGALYSWGTGPSGELGLAGEDE 510
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + ++ ++ + + GGQH+V L + K
Sbjct: 511 VATPTGVVRREGGSWAAVAGSCGGQHTVALLRSK 544
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-----------PDVMERKTFALVEDLDNVVEVVVGGMHT- 81
T G V CG+ D GQLG+ PD++ T D D+ V + G+ +
Sbjct: 424 TKAGKVYACGRSDGGQLGIEKDSEAFEESDFPDMLAEPTLVPFPDDDDPVVFISAGIKSN 483
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALL 136
+ +TE G +Y+WG G LG E D P V + AV S G H+VALL
Sbjct: 484 IAVTEGGALYSWGTGPSGELGLAGE-DEVATPTGVVRREGGSWAAVAGSCGGQHTVALL 541
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERK--------TFALVEDLDNVVEVVVGGMHTVCLTEDG 88
G V T G G+ GQLG V+ER+ L V V G + + E G
Sbjct: 307 GNVYTWGAGEQGQLGR--KVLERRKIHGTVPEKIVLGSRSHKAVIVGAGNYTSFAVDEKG 364
Query: 89 KVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKK--------------AVQISAGDSH 131
V+ WG N+ G G D+E V LPK+ VQI+ G+ H
Sbjct: 365 VVWAWGLNNMGQTGTGFTSLAADAE-----VQLPKRVRGLSKEELGGEDYVVQIAGGEHH 419
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLK--GEGIQKT--PLKLESVS---------GIVKIA 178
++ L + G VYA G R G +G++ E +++ P L + +V I+
Sbjct: 420 TLFLTKAGKVYACG--RSDGGQLGIEKDSEAFEESDFPDMLAEPTLVPFPDDDDPVVFIS 477
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G + +T G L + G G+LG
Sbjct: 478 AGIKSNIAVTEGGALYSWGTGPSGELG 504
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 230/489 (47%), Gaps = 68/489 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ER T V L V + G HT +++DG V+ WG N
Sbjct: 76 GTVWAWGLNVWGQLGDGTHT-ERHTPVQVPGLTGVTAIAAGRRHTFAVSQDGTVWAWGDN 134
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
D G LG D P V LP+ I+AG H+ A+ +DGTV+AWG ++ G +
Sbjct: 135 DWGQLGDGTRAD-RHTP--VQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGD--NAWGQL 189
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSA 212
G + TP+++ ++G+ IA+G H + + G + G GQL G T+R
Sbjct: 190 GDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTER-- 247
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
L P +VP + + G +T + G++ A+G N + QLG+
Sbjct: 248 ----------LTPVQVP-GLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGT--- 293
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
T TP + LS T +A G+ H+ A+ +G ++A+G + +G+LG S+
Sbjct: 294 ----RTDRLTPVQVPGLS--GVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDR 347
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN----- 386
+T P +P L ++T+IA G+ + A+ +G ++ WG QLG+G D L
Sbjct: 348 LT-PVQVPDL--TSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVP 404
Query: 387 -------------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+G ++A+G + +G+LG ++ +T P +P L ++T+
Sbjct: 405 GLTGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLT-PVQVPDL--TSVTA 461
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEGKQLNNYTVL-QVASG 485
IA G+ + A+ +G + WG N Y QLG+G P+ + G L TV +A+G
Sbjct: 462 IAAGDYHTLAVRQDGTVCAWGF-NAYGQLGDGTSSRSPSPVMVPG--LTGVTVFAALAAG 518
Query: 486 GQHSVILAK 494
H+V + +
Sbjct: 519 DSHTVAVMQ 527
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 222/481 (46%), Gaps = 59/481 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G GQLG G +R T V L V V G HT + +DG V+ WG N
Sbjct: 26 GTAWAWGNNAWGQLGDGTRT-DRLTPVQVPGLTGVTAVAAGRHHTFAVRQDGTVWAWGLN 84
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + P V I+AG H+ A+ +DGTV+AWG + G +G
Sbjct: 85 VWGQLG-DGTHTERHTPVQVPGLTGVTAIAAGRRHTFAVSQDGTVWAWGD--NDWGQLGD 141
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP++L ++G+ IA+G H + G + G GQLG +R
Sbjct: 142 GTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLG-----DGTRTN 196
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R L P +VP + + G Y+T + G++ A+G N QLG+
Sbjct: 197 R-----LTPVQVP-GLTGVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGT------- 243
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
T TP + L+ T +++G+ H++A+ +G ++A+G + +G+LG ++ +T P
Sbjct: 244 YTERLTPVQVPGLT--GVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLT-P 300
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN--------- 386
+P L +T+IA G +FA+ +G ++ WG+ QLG+G D L
Sbjct: 301 VQVPGLSG--VTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLTS 358
Query: 387 ---------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+G ++A+G + +G+LG ++ +T P +P L +T+IA G
Sbjct: 359 VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLT-PVQVPGLTG--VTAIAAG 415
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ A+ +G ++ WG QLG+G D L P+++ + +V +A+G H++
Sbjct: 416 ESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVP----DLTSVTAIAAGDYHTLA 471
Query: 492 L 492
+
Sbjct: 472 V 472
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 214/453 (47%), Gaps = 58/453 (12%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
V L V G HTV + +DG + WG N G LG D P V
Sbjct: 3 VPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-RLTPVQVPGLTGVTA 61
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
++AG H+ A+ +DGTV+AWG + G +G + TP+++ ++G+ IA+G H
Sbjct: 62 VAAGRHHTFAVRQDGTVWAWG--LNVWGQLGDGTHTERHTPVQVPGLTGVTAIAAGRRHT 119
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
++ G + G + GQLG T+ A R+ P ++P + + + G +
Sbjct: 120 FAVSQDGTVWAWGDNDWGQLGDGTR--ADRH--------TPVQLP-ELTGVTAIAAGRRH 168
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
TF + G++ A+G N + QLG+ T TP + L+ T +A+G +H+
Sbjct: 169 TFAVRQDGTVWAWGDNAWGQLGDGT-------RTNRLTPVQVPGLT--GVTAIAAGDYHT 219
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LA+ +G ++A+G + G+LG +E +T P +P L +T+I+ G + A+ +G
Sbjct: 220 LAVRQDGTVWAWGNNALGQLGDGTYTERLT-PVQVPGLTG--VTAISAGESHTVAVRQDG 276
Query: 364 VLYGWGMGNGYQLGNGKEDDILN------------------------SEGKIYAFGRHDY 399
++ WG QLG+G D L +G ++A+G + +
Sbjct: 277 TVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFW 336
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G+LG S+ +T P +P L ++T+IA G+ + A+ +G ++ WG QLG+G
Sbjct: 337 GQLGDGTRSDRLT-PVQVPDL--TSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGT 393
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
D L P+++ G V +A+G H+V +
Sbjct: 394 YTDRLTPVQVPGLT----GVTAIAAGESHTVAM 422
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 204/443 (46%), Gaps = 68/443 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +R T V DL +V + G HT+ + +DG V WG N
Sbjct: 426 GTVWAWGDNVWGQLGDGT-YTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA-----VQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G LG +G S P V +P ++AGDSH+VA+++DGTV+AWG ++
Sbjct: 485 AYGQLG---DGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWG--LNAS 539
Query: 152 GSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQ 209
G +G ++ P+++ ++G+ IA+G+ H + G + + G GQLG T
Sbjct: 540 GQLGDGATIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTH 599
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEAD 268
R L P +VP + + G ++ + G++ A+G N++ QLG+
Sbjct: 600 R------------LSPVQVP-GLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGT 646
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + TP + L+ T +A+G H++AL +G ++A+G +D G+LG
Sbjct: 647 TAAR-------LTPVQVHGLT--GVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTT 697
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
+ + P + L D +T+IA G + A+ +G ++ WG QLG+G
Sbjct: 698 TRRL-APVQVQGLTD--VTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSS------- 747
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
TP+ + ++++A G + A+ +G ++ WG
Sbjct: 748 ----------------------TARSTPVQVQELTGVSALAAGYAHTVAVKQDGTVWAWG 785
Query: 449 MGNGYQLGNGKEDDILEPMKIEG 471
+G QLGNG D P+ +EG
Sbjct: 786 NNSGTQLGNGSSTDRYTPVWVEG 808
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G R T V L V V G +HTV L +DG V+ WG N
Sbjct: 629 GTVSAWGRNSWGQLGDGT-TAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGTVWAWGYN 687
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG + P V I+AG H+VA+ +DGTV+AWG + G +G
Sbjct: 688 DLGQLG-DGTTTRRLAPVQVQGLTDVTAIAAGYFHTVAVRQDGTVWAWG--YNLWGQLGD 744
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP++++ ++G+ +A+G H V + G + G QLG + S
Sbjct: 745 GSSTARSTPVQVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLG-----NGSSTD 799
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGE 266
R ++E + + G ++T +S +G A+G NN+ Q+G+
Sbjct: 800 RYTPVWVE------GLTGVSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGD 844
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ +G +A+G + +G+LG ++ +T P +P L +T++A G +FA+ +G +
Sbjct: 22 VRQDGTAWAWGNNAWGQLGDGTRTDRLT-PVQVPGLTG--VTAVAAGRHHTFAVRQDGTV 78
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ WG+ QLG+G + P+++ G V +A+G +H+ +++
Sbjct: 79 WAWGLNVWGQLGDGTHTERHTPVQVPGLT----GVTAIAAGRRHTFAVSQ 124
>gi|321259754|ref|XP_003194597.1| poly(a)+ RNA transport protein [Cryptococcus gattii WM276]
gi|317461069|gb|ADV22810.1| Poly(a)+ RNA transport protein, putative [Cryptococcus gattii
WM276]
Length = 590
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/552 (28%), Positives = 237/552 (42%), Gaps = 104/552 (18%)
Query: 18 QKVFVTSEAVPTLK-CKTGGGVVLTCGQGDTGQLGLGPDVMER----KTFALVEDL---- 68
+K+ A+P++ KT + G GD GQ GLGPD ++ K + E+
Sbjct: 68 KKIVRGINAIPSIPPVKTPHNALFVWGTGDQGQFGLGPDNLDEIGRPKLHSWFEEQIEEG 127
Query: 69 ----------DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG----------- 107
+ V GGMHT+ + E G+V +WG ND ALGR
Sbjct: 128 NLSRDGKPGSGGLEYVYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKDPGQMI 187
Query: 108 ---DSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-- 158
D E P V + +AVQ++AGDS SVA+ E G + AWGSFR + G +G G
Sbjct: 188 PNEDLESYPFVVETLEQEGFRAVQVAAGDSISVAISEKGELRAWGSFRSNEGILGFDGVP 247
Query: 159 --EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
Q TP+ L ++S I +++ GADH + LT+ G++ G E+ QLGR
Sbjct: 248 GHPKFQYTPISLPALSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRI 307
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
N LEP + L ++I V G+Y++F + +KG + +GLN + Q G A+ +
Sbjct: 308 NG------LEPERLGL--RNIVHVAAGIYHSFAVDNKGVVYGWGLNTFHQTGVAEHQ--- 356
Query: 274 SGNTCFFTPHLIKSL-----SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
P ++ +L + K ++ G+HHSL L G+++ GR D LGL
Sbjct: 357 ---DMIIAPTVVDALHPDRHNGSKVIKVSGGEHHSLFLFDNGEVWGCGRCDANELGLSE- 412
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
P E K ++ + +L + + D ++ E
Sbjct: 413 DHPAFEGI-------KERREELQREREERVVEKQ-----------KKLDDVLKKDKVDEE 454
Query: 389 GKIYAFGRHDYGRLGLK------NVSEPVT---EPTP--------IPSLQD-----KTIT 426
K A + LK V EPV P P P+ +D +
Sbjct: 455 EKQKAEMELSEAQATLKVPPSGEYVPEPVRICFPPIPEKYEVVPEFPAYKDSKPVDNPVV 514
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
I+ G + A+ G LY WG GN QLG G E+ P + K L Y + V++GG
Sbjct: 515 DISAGMRHNLAVSKSGHLYAWGYGNLAQLGLGSEEVAEVPSLVRSKLLRPYRSVAVSAGG 574
Query: 487 QHSVILAKPKPN 498
QH V LA KP+
Sbjct: 575 QHCVALAAKKPD 586
>gi|296424526|ref|XP_002841799.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638047|emb|CAZ85990.1| unnamed protein product [Tuber melanosporum]
Length = 466
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 200/424 (47%), Gaps = 64/424 (15%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT------FALVEDLDNV 71
+ + + +PT K + G GD +LG+GP+V + L+ + +
Sbjct: 9 KPISAITNPLPTQKLN-----IYAFGTGDNAELGIGPEVNAKVVKRPGLNAHLLPEKVGI 63
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA----------EGDS------------ 109
V V +GGMH + L+ +GKVY+WG ND+ ALGR GD+
Sbjct: 64 VAVAMGGMHGLALSYEGKVYSWGVNDQYALGRATTHTPLTRVVCSGDNGNSDCDDKVPLN 123
Query: 110 --EFIPQTVN-LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQK 163
E P + P+ V I+AGDS +A+ E G VY WG+FR + + + +Q+
Sbjct: 124 PLESTPMLITAFPEGTVITSIAAGDSILIAVTETGRVYGWGTFRCADCILRFNERTSVQE 183
Query: 164 TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
P+ L + IV+++ DH + LT G++ G +Q QLGR RR ++ L
Sbjct: 184 VPVLLPTPKSIVRVSISTDHVLGLTKEGDVYAWGNGQQSQLGRRVSE------RRRLTGL 237
Query: 224 EPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
P +V L+R+ ++ V G ++F I+ GS+ A+GLN+ + + + + +T P
Sbjct: 238 TPRQVSLRRRKVNYVAAGSNHSFAITRDGSLWAWGLNHIWAMWDMRASAHRGASTVIPVP 297
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS------------- 329
+++SL+ +++G+HHS AL G + +GR D G+L + +
Sbjct: 298 TVVQSLAGYAIVQISAGEHHSTALTENGVLLVWGRLDSGQLSIDPAALSPDDCVSDSRGN 357
Query: 330 -EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILNS 387
+ P +P ++ ++I CG + A+ EG Y WG YQ G G + DD + +
Sbjct: 358 PRYLRTPHTVPGIR---FSTIGCGMDHNIAVSMEGQAYSWGFSGSYQTGLGPDADDEITT 414
Query: 388 EGKI 391
KI
Sbjct: 415 PTKI 418
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 112/287 (39%), Gaps = 64/287 (22%)
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSLSDKK--F 293
+ + N + K +I AFG + ++LG E +++V K P L L +K
Sbjct: 11 ISAITNPLPTQKLNIYAFGTGDNAELGIGPEVNAKVVKR-------PGLNAHLLPEKVGI 63
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-------------------- 333
+A G H LAL+ EGK+Y++G +D LG P+T
Sbjct: 64 VAVAMGGMHGLALSYEGKVYSWGVNDQYALGRATTHTPLTRVVCSGDNGNSDCDDKVPLN 123
Query: 334 --EPTP--IPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
E TP I + + T ITSIA G+ + A+ G +YGWG
Sbjct: 124 PLESTPMLITAFPEGTVITSIAAGDSILIAVTETGRVYGWGT--------------FRCA 169
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
I F R ++ V PV PTP K+I ++ + EG +Y WG
Sbjct: 170 DCILRFNE----RTSVQEV--PVLLPTP------KSIVRVSISTDHVLGLTKEGDVYAWG 217
Query: 449 MGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G QLG E L + L V VA+G HS + +
Sbjct: 218 NGQQSQLGRRVSERRRLTGLTPRQVSLRRRKVNYVAAGSNHSFAITR 264
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG--------DSEFIPQTVNLPK-- 120
+V++ G H+ LTE+G + WG D G L + DS P+ + P
Sbjct: 308 IVQISAGEHHSTALTENGVLLVWGRLDSGQLSIDPAALSPDDCVSDSRGNPRYLRTPHTV 367
Query: 121 ---KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
+ I G H++A+ +G Y+WG +G + TP K+E+ +
Sbjct: 368 PGIRFSTIGCGMDHNIAVSMEGQAYSWGFSGSYQTGLGPDADDEITTPTKIENTA 422
>gi|126134081|ref|XP_001383565.1| pheromone response pathway [Scheffersomyces stipitis CBS 6054]
gi|126095714|gb|ABN65536.1| pheromone response pathway [Scheffersomyces stipitis CBS 6054]
Length = 499
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 197/411 (47%), Gaps = 66/411 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDLD--NVVEVVVGGMHTVCLTEDGK 89
+ G G +LGLGP ++ F E LD +V+ VGGMHT+ L +
Sbjct: 54 IFVWGTGSMCELGLGPSAKNKEVKRPRLNPFLTEEKLDGTKIVDFSVGGMHTLALDGKNR 113
Query: 90 VYTWGCNDEGALGR---------------EAEGD-------SEFIPQTVN-LPK----KA 122
+++WG ND G LGR E+E D +E P V LP+ K
Sbjct: 114 IWSWGGNDSGVLGRDTSKVKEVLKDVDSNESEDDEDGDLNEAESTPGLVEGLPQIKSSKI 173
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASG 180
VQ+ A D+ S AL ++G VYAWG FR + G +G E I QK+PL+++ + IV++A G
Sbjct: 174 VQLVATDNLSAALYDNGDVYAWGCFRCNEGLLGFLREEIKVQKSPLEIKELKNIVQLARG 233
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
DH + L +G + G +Q QLGR I +R R+ LEP + L +I +
Sbjct: 234 KDHILALDVKGIVYAWGNGQQYQLGRRIIERHRYRS-------LEPQQFGLY--NIKYIA 284
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+G ++ F I + +GLN + Q +S+ + + P L+ SLS K +++
Sbjct: 285 SGDFHCFAIDHDDKVYTWGLNQFGQCALTNSDGELEDGSLITKPTLVPSLSGKGIVEISA 344
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-----------PTPIP----SLQD 343
G+HH+LAL EG + ++GR+D +G+ P + PTP ++D
Sbjct: 345 GEHHTLALTREGDVLSWGRYDMKEVGISKDRLPKSTFKDAHGNARSVPTPTKLHFGKVED 404
Query: 344 K--TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
I I G+ SFA+ +G +Y WG + Y G G D+ + +I+
Sbjct: 405 NGVKIKEIGTGSHNSFAVTDDGFVYSWGFADTYAPGLGPLDEDVEIPTRIF 455
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 55/282 (19%)
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK----------------SGN 276
K +D G++ + K I ++G N+ LG S+V++ N
Sbjct: 94 KIVDFSVGGMHTLALDGKNRIWSWGGNDSGVLGRDTSKVKEVLKDVDSNESEDDEDGDLN 153
Query: 277 TCFFTPHLIKSL---SDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEP 331
TP L++ L K L + + S AL G +YA+G R + G LG E
Sbjct: 154 EAESTPGLVEGLPQIKSSKIVQLVATDNLSAALYDNGDVYAWGCFRCNEGLLGFLR-EEI 212
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
+ +P+ + K I +A G A+D +G++Y WG G YQLG +
Sbjct: 213 KVQKSPLEIKELKNIVQLARGKDHILALDVKGIVYAWGNGQQYQLGRRIIERHRYRSLEP 272
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIP 418
++ + K+Y +G + +G+ L N +T+PT +P
Sbjct: 273 QQFGLYNIKYIASGDFHCFAIDHDDKVYTWGLNQFGQCALTNSDGELEDGSLITKPTLVP 332
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
SL K I I+ G + A+ EG + WG + ++G K+
Sbjct: 333 SLSGKGIVEISAGEHHTLALTREGDVLSWGRYDMKEVGISKD 374
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 104/265 (39%), Gaps = 58/265 (21%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLALNSEGK 311
I +G + +LG S K P L + L K + G H+LAL+ + +
Sbjct: 54 IFVWGTGSMCELGLGPSAKNKEVKRPRLNPFLTEEKLDGTKIVDFSVGGMHTLALDGKNR 113
Query: 312 IYAFGRHDYGRLG---------LKNVSEPVTE-----------PTP-----IPSLQDKTI 346
I+++G +D G LG LK+V +E TP +P ++ I
Sbjct: 114 IWSWGGNDSGVLGRDTSKVKEVLKDVDSNESEDDEDGDLNEAESTPGLVEGLPQIKSSKI 173
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ + +S A+ G +Y WG R + G LG
Sbjct: 174 VQLVATDNLSAALYDNGDVYAWGCF------------------------RCNEGLLGFLR 209
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
E + +P+ + K I +A G A+D +G++Y WG G YQLG I+E
Sbjct: 210 -EEIKVQKSPLEIKELKNIVQLARGKDHILALDVKGIVYAWGNGQQYQLGR----RIIER 264
Query: 467 MK---IEGKQLNNYTVLQVASGGQH 488
+ +E +Q Y + +ASG H
Sbjct: 265 HRYRSLEPQQFGLYNIKYIASGDFH 289
>gi|297282712|ref|XP_002808329.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Macaca mulatta]
Length = 380
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 149/247 (60%), Gaps = 22/247 (8%)
Query: 149 DSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D++G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR
Sbjct: 107 DNNGVIGLL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGR 165
Query: 207 ITQRSASRNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGL 258
+ + A+R R+G+ L P V LK R H+ D F G Y TF I +G + FGL
Sbjct: 166 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIXHEGHVYGFGL 225
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFG 316
+ Y QLG +E +CF P + S S K + + GQHH++ ++SEGK Y+ G
Sbjct: 226 STYHQLGTPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLG 278
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
R +YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQL
Sbjct: 279 RAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQL 336
Query: 377 GNGKEDD 383
G G+++D
Sbjct: 337 GTGQDED 343
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 47/251 (18%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIP 339
D +ASG H + L + G +Y G + G+LG + E + P +
Sbjct: 130 DVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV- 188
Query: 340 SLQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN--------------- 378
L+ + CG +FAI EG +YG+G+ +QLG
Sbjct: 189 MLKSRGSRGHVRFQDAFCGAYFTFAIXHEGHVYGFGLSTYHQLGTPGTESCFIPQNLTSF 248
Query: 379 ------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L +
Sbjct: 249 KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAV 306
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+SG
Sbjct: 307 SSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSG 366
Query: 486 GQHSVILAKPK 496
GQH+V+L K K
Sbjct: 367 GQHTVLLVKDK 377
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HTVC+ +GK Y+ G + G LG + + IP ++ ++ G S A+
Sbjct: 261 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVT 320
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEG---IQKTPLKLESVSGIVKIASGADHFVML 187
+DG V+AWG + G + ++ T +LE+ ++ ++SG H V+L
Sbjct: 321 KDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV-VLSVSSGGQHTVLL 373
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 50/280 (17%)
Query: 55 DVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE-----GD 108
+ M++ + LD VV+V G H V LT G +YT GC ++G LGR E G
Sbjct: 116 EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTAGGDLYTLGCGEQGQLGRVPELFANRGG 175
Query: 109 SE-----FIPQTVNLPKKAVQ-------ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ +P+ V L + + G + A+ +G VY +G ++ +G
Sbjct: 176 RQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIXHEGHVYGFG--LSTYHQLGT 233
Query: 157 KGEGIQKTPLKLESVSGIVK----IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G P L S K + G H V + S G + G E G+LG + + +
Sbjct: 234 PGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG-LGEGAE 292
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLG-----E 266
++ +S L + V G + +K G + A+G+ QLG +
Sbjct: 293 EKSIPTLISRLP---------AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 343
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
A S V+ +G K L ++ ++SG H++ L
Sbjct: 344 AWSPVEMTG----------KQLENRVVLSVSSGGQHTVLL 373
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 267 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 326
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 327 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 376
>gi|385304742|gb|EIF48748.1| regulator of chromosome condensation [Dekkera bruxellensis
AWRI1499]
Length = 388
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 173/352 (49%), Gaps = 50/352 (14%)
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAE----------------------GDSEFIPQTV 116
MHT+ L + V++WG ND G LGR ++E P V
Sbjct: 1 MHTLALDKSNNVWSWGTNDMGVLGRNTSLKKETPLDEKEEEDEXDEDDDLNEAESTPGLV 60
Query: 117 N-LPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVS 172
LPK + VQ++A D+ S ALLE G VYAWG+FR + G +G K IQKTP+++E
Sbjct: 61 EGLPKBKRIVQLAATDNLSAALLETGEVYAWGTFRCNEGILGFSKKVKIQKTPVQIEDFD 120
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
IV+IA+G DH + L S+G G +Q QLGR R M+ LEP LK
Sbjct: 121 NIVQIAAGKDHLLALDSKGVAYAWGNGQQFQLGRKIME------RTRMTSLEPRSFGLK- 173
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
++ V +G Y++ I+ G + +GLN + Q G A S ++ + P + LS K
Sbjct: 174 -NVKYVGSGDYHSMAITHDGKVYTWGLNQFGQCGIA-SNIEDG--SIVSRPTEVTELSGK 229
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE------------PTPIP 339
+ G+HH+LAL+S G++Y FGR+D +G+ P+ + P P
Sbjct: 230 DIVAITGGEHHTLALSSSGEVYVFGRYDMKEIGIPEDKLPLDDCVKDARGHVRCLPVPTK 289
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
I ++A G S A+ +GV+Y WG + + +G G DD ++ +I
Sbjct: 290 LTSLPPIKAVAAGPHHSLALTKDGVVYAWGFADTFAVGLGMLDDDVDHPTRI 341
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 162/396 (40%), Gaps = 71/396 (17%)
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL----------------KLESVSGI 174
H++AL + V++WG+ + G +G ++TPL + ES G+
Sbjct: 2 HTLALDKSNNVWSWGT--NDMGVLGRNTSLKKETPLDEKEEEDEXDEDDDLNEAESTPGL 59
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V+ V L + NL +A E G++ + ++ + P++ +
Sbjct: 60 VEGLPKBKRIVQLAATDNL-SAALLETGEVYAWGTFRCNEGILGFSKKVKIQKTPVQIED 118
Query: 235 IDDVFTGV----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
D++ + + SKG A+G QLG ++ + P +S
Sbjct: 119 FDNIVQIAAGKDHLLALDSKGVAYAWGNGQQFQLGR---KIMERTRMTSLEP---RSFGL 172
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---VTEPTPIPSLQDKTIT 347
K + SG +HS+A+ +GK+Y +G + +G+ G+ + E V+ PT + L K I
Sbjct: 173 KNVKYVGSGDYHSMAITHDGKVYTWGLNQFGQCGIASNIEDGSIVSRPTEVTELSGKDIV 232
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+I G + A L+S G++Y FGR+D +G+
Sbjct: 233 AITGGEHHTLA--------------------------LSSSGEVYVFGRYDMKEIGIPED 266
Query: 408 SEPVTE------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
P+ + P P I ++A G S A+ +GV+Y WG + + +
Sbjct: 267 KLPLDDCVKDARGHVRCLPVPTKLTSLPPIKAVAAGPHHSLALTKDGVVYAWGFADTFAV 326
Query: 456 GNGK-EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G G +DD+ P +I+ N+ + + GGQ SV
Sbjct: 327 GLGMLDDDVDHPTRIDNTATRNHAIELIGCGGQFSV 362
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 142/319 (44%), Gaps = 32/319 (10%)
Query: 61 TFALVEDL---DNVVEVVVGGMHTVCLTEDGKVYTWG---CNDEGALGREAEGDSEFIPQ 114
T LVE L +V++ + L E G+VY WG CN EG LG + + P
Sbjct: 56 TPGLVEGLPKBKRIVQLAATDNLSAALLETGEVYAWGTFRCN-EGILGFSKKVKIQKTPV 114
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLES--V 171
+ VQI+AG H +AL G YAWG+ + +G K E + T L+ S +
Sbjct: 115 QIEDFDNIVQIAAGKDHLLALDSKGVAYAWGNGQQFQ--LGRKIMERTRMTSLEPRSFGL 172
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
+ + SG H + +T G + T G + GQ G + N G P EV L
Sbjct: 173 KNVKYVGSGDYHSMAITHDGKVYTWGLNQFGQCG------IASNIEDGSIVSRPTEVTEL 226
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV--------QKSGNTCFFT 281
K I + G ++T +SS G + FG + ++G + ++ + C
Sbjct: 227 SGKDIVAITGGEHHTLALSSSGEVYVFGRYDMKEIGIPEDKLPLDDCVKDARGHVRCLPV 286
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI--P 339
P + SL K +A+G HHSLAL +G +YA+G D +GL + + V PT I
Sbjct: 287 PTKLTSLPPIK--AVAAGPHHSLALTKDGVVYAWGFADTFAVGLGMLDDDVDHPTRIDNT 344
Query: 340 SLQDKTITSIACGNCVSFA 358
+ ++ I I CG S +
Sbjct: 345 ATRNHAIELIGCGGQFSVS 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 58/218 (26%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVS-------------------EPVTEPTPIPSL- 341
H+LAL+ ++++G +D G LG +N S + + E P L
Sbjct: 2 HTLALDKSNNVWSWGTNDMGVLG-RNTSLKKETPLDEKEEEDEXDEDDDLNEAESTPGLV 60
Query: 342 ----QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRH 397
+BK I +A + +S A+ G +Y WG R
Sbjct: 61 EGLPKBKRIVQLAATDNLSAALLETGEVYAWGTF------------------------RC 96
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ G LG + P I + I IA G A+DS+GV Y WG G +QLG
Sbjct: 97 NEGILGFSKKVKIQKTPVQIEDFDN--IVQIAAGKDHLLALDSKGVAYAWGNGQQFQLGR 154
Query: 458 GKEDDILEPMK---IEGKQLNNYTVLQVASGGQHSVIL 492
I+E + +E + V V SG HS+ +
Sbjct: 155 ----KIMERTRMTSLEPRSFGLKNVKYVGSGDYHSMAI 188
>gi|19112818|ref|NP_596026.1| Ran GDP/GTP exchange factor [Schizosaccharomyces pombe 972h-]
gi|12644186|sp|P28745.2|RCC1_SCHPO RecName: Full=Protein pim1; AltName: Full=Poly(A)+ RNA transport
protein 2
gi|6434004|emb|CAB60670.1| Ran GDP/GTP exchange factor [Schizosaccharomyces pombe]
Length = 539
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 182/380 (47%), Gaps = 48/380 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVME-----RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G G +LG+G + M+ R L D VV++ VGGMH+ L+ DG+VYTW
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 94 GCNDEGALGR------EAEGDS------EFIPQTVN---LPKKAVQISAGDSHSVALLED 138
G ND+ ALGR + GD E P V + ++ D+ + A+ ++
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
G + WG+FR S G +G + + I ++A+G DH + LT+ G + T G
Sbjct: 193 GCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGN 252
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+Q QLGR RR + L P PL K+I V G Y++F I +KG + A+G
Sbjct: 253 GQQFQLGRRMLE------RRRLQGLTPQ--PLALKNIISVGAGSYHSFAIDNKGRVYAWG 304
Query: 258 LNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
LN Q G EV+ T P L+ +L + G+HH+LAL +G++ A+G
Sbjct: 305 LNITRQCG---IEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWG 361
Query: 317 RHDYGRLGLKNVSEPVT-------------EPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
R D +LG+ + + P T PT IP L + + + CG + A+ S+G
Sbjct: 362 RDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN--VIQVVCGTHHNLAVTSDG 419
Query: 364 VLYGWGMGNGYQLGNGKEDD 383
+Y WG Y++G G D+
Sbjct: 420 KVYSWGSAENYEVGQGDNDE 439
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 182/447 (40%), Gaps = 83/447 (18%)
Query: 112 IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-------- 163
+P+ V +P A +I+ L VY +GS GSM G G ++
Sbjct: 47 LPKPVRVPGSAKRINKIPELPTERL---NVYVFGS-----GSMNELGMGEEEMDVVYRPR 98
Query: 164 -TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR-GMS 221
P+ G+V +A G H L+ G + T G + LGR+T+ N +
Sbjct: 99 LNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDND 158
Query: 222 FLE--PGEVPLKRKHI---DDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEADSEVQKS 274
LE P +V H+ + + I+ G +G S LG +DS+ + +
Sbjct: 159 LLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTA 218
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T P + + LA+G H +AL + GK+Y +G +LG + + +
Sbjct: 219 EPTQMRLPEICQ---------LATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQ 269
Query: 335 -PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
TP P L K I S+ G+ SFAID++G +Y WG+ Q G ED+
Sbjct: 270 GLTPQP-LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 384 ---------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT---------- 412
L +G++ A+GR D +LG+ + + P T
Sbjct: 329 LVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNY 388
Query: 413 ---EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMK 468
PT IP L + + + CG + A+ S+G +Y WG Y++G G D D+ P
Sbjct: 389 YLSTPTIIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTL 446
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAKP 495
+ K + + +GGQ S+I P
Sbjct: 447 VRSKAIKEVAIRVAGAGGQFSIIAGIP 473
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPD-------VMERK-------TFALVEDLDNVVEVVVGGMHTV 82
G VL G+ D QLG+ PD V + K T ++ L NV++VV G H +
Sbjct: 355 GRVLAWGRDDRHQLGI-PDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNL 413
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
+T DGKVY+WG + +G+ + +P V
Sbjct: 414 AVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
>gi|315040994|ref|XP_003169874.1| hypothetical protein MGYG_08044 [Arthroderma gypseum CBS 118893]
gi|311345836|gb|EFR05039.1| hypothetical protein MGYG_08044 [Arthroderma gypseum CBS 118893]
Length = 487
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 190/410 (46%), Gaps = 68/410 (16%)
Query: 39 VLTCGQGDTGQLGLGP-DVMERKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYTW 93
V G G + +LGLGP + + K L +LD VV ++ GGMH LT D + TW
Sbjct: 47 VYVFGSGSSAELGLGPKNAINVKRPRLNTNLDAEKVGVVNIIAGGMHAAALTHDNHILTW 106
Query: 94 GCNDEGALGREA---------EGDSEFI--------PQTVN--------LPK--KAVQIS 126
G ND ALGRE +GD E + P+ N P+ K Q++
Sbjct: 107 GVNDNFALGRETTWDGGLKDMDGDDESVASDEVELNPREANPTAVSDDSFPEGTKFCQVT 166
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGI--QKTPLKLESVSGIVKIASGADH 183
AGD+ + AL EDG VY WG+F + G G GE I Q P+++ + I +I++G +
Sbjct: 167 AGDNATFALTEDGFVYGWGTFVTTEGGRGWWNGELIEMQPDPIRILGLEKITQISAGNNF 226
Query: 184 FVMLTSRGNLLTAGCPEQGQLG---RITQRSASRNARRGMSFLE------PGEVPL-KRK 233
+ L +G + + G PEQ QLG R+ +R + N + L PG V L K K
Sbjct: 227 CLALDYKGRVFSWGRPEQDQLGRHIRVDRRKTAGNKNASIDKLRNDIGLIPGLVALPKSK 286
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G ++F I S G +GLNN+ Q A + G + P L K
Sbjct: 287 RIISIHAGSDHSFAIDSNGDTWTWGLNNFGQ--AAVNVGAGKGGSTIVRPQKATMLVSHK 344
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT----------------EPT 336
M+ G+HHS+ + +G+ +GR D ++G+ N + P+ EPT
Sbjct: 345 MKMIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDNSTLPLDDPQIIISERGKPRILLEPT 404
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDIL 385
P+P T A G+ + I SEG Y WG+ YQ G G + DDIL
Sbjct: 405 PLPI---PNCTFAAAGSDHNILITSEGKAYTWGINATYQCGQGPDTDDIL 451
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 173/440 (39%), Gaps = 97/440 (22%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLT 195
VY +GS + +G K K P L E V G+V I +G H LT ++LT
Sbjct: 47 VYVFGSGSSAELGLGPKNAINVKRPRLNTNLDAEKV-GVVNIIAGGMHAAALTHDNHILT 105
Query: 196 AGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLKRKHI------DDVF--------- 239
G + LGR T G + EV L + DD F
Sbjct: 106 WGVNDNFALGRETTWDGGLKDMDGDDESVASDEVELNPREANPTAVSDDSFPEGTKFCQV 165
Query: 240 -TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G TF ++ G + +G ++ G +G P I+ L +K T ++
Sbjct: 166 TAGDNATFALTEDGFVYGWGTFVTTEGGRG----WWNGELIEMQPDPIRILGLEKITQIS 221
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGL------------KNVS--EPVTEPTPIPSL-- 341
+G + LAL+ +G+++++GR + +LG KN S + + IP L
Sbjct: 222 AGNNFCLALDYKGRVFSWGRPEQDQLGRHIRVDRRKTAGNKNASIDKLRNDIGLIPGLVA 281
Query: 342 --QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ------------------------ 375
+ K I SI G+ SFAIDS G + WG+ N Q
Sbjct: 282 LPKSKRIISIHAGSDHSFAIDSNGDTWTWGLNNFGQAAVNVGAGKGGSTIVRPQKATMLV 341
Query: 376 ------LGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVT---------------- 412
+ G+ I + +G+ +GR D ++G+ N + P+
Sbjct: 342 SHKMKMIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDNSTLPLDDPQIIISERGKPRILL 401
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEG 471
EPTP+P T A G+ + I SEG Y WG+ YQ G G + DDIL KI+
Sbjct: 402 EPTPLPI---PNCTFAAAGSDHNILITSEGKAYTWGINATYQCGQGPDTDDILVATKIDN 458
Query: 472 KQLNNYTVLQVASGGQHSVI 491
L +GGQ+S++
Sbjct: 459 ISLREKVFCWAGAGGQYSML 478
>gi|156848822|ref|XP_001647292.1| hypothetical protein Kpol_1002p82 [Vanderwaltozyma polyspora DSM
70294]
gi|156117977|gb|EDO19434.1| hypothetical protein Kpol_1002p82 [Vanderwaltozyma polyspora DSM
70294]
Length = 479
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 185/399 (46%), Gaps = 64/399 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L +D +V VGGMHT+ L D V++
Sbjct: 45 IFCWGSGPMCELGLGPLAKNKEVKRPRLNPFLSKDEVKIVSFAVGGMHTIALDSDMNVWS 104
Query: 93 WGCNDEGALGREAEGDSEFI----------------------PQTV---NLP-----KKA 122
WGCND GALGR+ G SE + P + N P K
Sbjct: 105 WGCNDVGALGRDTSGASEKLKDMDADDSSDDDDGDLNELESTPHKIPRENFPPLADGHKV 164
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVSG--IVKIA 178
VQ++A D+ S L +G VYAWG+FR + G +G E IQ TP K+ + S IV++A
Sbjct: 165 VQLAATDNMSCILFSNGDVYAWGTFRCNEGILGFYQEEIKIQNTPWKVPNFSKYQIVQLA 224
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P K + +
Sbjct: 225 PGKDHMLFLDEEGVVFAWGNGQQHQLGRKVME------RFRLKTLDPR--PFGLKQVKYI 276
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F I G ++++GLN + Q G SE + G +P + D K +A
Sbjct: 277 ASGENHCFAIKKDGKVVSWGLNQFGQCG--ISEDIEDG-ALVESPKKVLLPEDFKVKSIA 333
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPS-LQD-KTI 346
+G+HHSL L+ EG +Y FGR D +G+ P + PIP+ L+D
Sbjct: 334 AGEHHSLVLSEEGDLYTFGRLDMFEVGISKDKLPESAYKDEHGKARSIPIPTKLEDVPKF 393
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDI 384
++A G+ S A+ G+ Y WG G Y +G G DDI
Sbjct: 394 KTVAAGSHHSIAVAKNGIAYSWGFGETYAVGLGPSGDDI 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 155/385 (40%), Gaps = 76/385 (19%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR-----------NARRGMSF 222
IV A G H + L S N+ + GC + G LGR T ++ + + ++
Sbjct: 83 IVSFAVGGMHTIALDSDMNVWSWGCNDVGALGRDTSGASEKLKDMDADDSSDDDDGDLNE 142
Query: 223 LE--PGEVPLK--------RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEADSE 270
LE P ++P + K + T + + S G + A+G ++ LG E
Sbjct: 143 LESTPHKIPRENFPPLADGHKVVQLAATDNMSCILFSNGDVYAWGTFRCNEGILGFYQEE 202
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRLGLKN 327
++ TP + + S + LA G+ H L L+ EG ++A+G +H GR ++
Sbjct: 203 IKIQN-----TPWKVPNFSKYQIVQLAPGKDHMLFLDEEGVVFAWGNGQQHQLGRKVMER 257
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---- 383
+P P K + IA G FAI +G + WG+ Q G ++ +
Sbjct: 258 FRLKTLDPRPFGL---KQVKYIASGENHCFAIKKDGKVVSWGLNQFGQCGISEDIEDGAL 314
Query: 384 --------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT----- 412
+L+ EG +Y FGR D +G+ P +
Sbjct: 315 VESPKKVLLPEDFKVKSIAAGEHHSLVLSEEGDLYTFGRLDMFEVGISKDKLPESAYKDE 374
Query: 413 ----EPTPIPS-LQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
PIP+ L+D ++A G+ S A+ G+ Y WG G Y +G G DDI
Sbjct: 375 HGKARSIPIPTKLEDVPKFKTVAAGSHHSIAVAKNGIAYSWGFGETYAVGLGPSGDDIEI 434
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSV 490
P +I+ + ++ GGQ SV
Sbjct: 435 PTRIKNTATQEHNIIMADCGGQFSV 459
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVME------RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
G V++ G GQ G+ D+ + K L ED V + G H++ L+E+G +
Sbjct: 290 GKVVSWGLNQFGQCGISEDIEDGALVESPKKVLLPEDF-KVKSIAAGEHHSLVLSEEGDL 348
Query: 91 YTWGCNDEGALG-----------REAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLE 137
YT+G D +G ++ G + IP L K ++AG HS+A+ +
Sbjct: 349 YTFGRLDMFEVGISKDKLPESAYKDEHGKARSIPIPTKLEDVPKFKTVAAGSHHSIAVAK 408
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
+G Y+WG +G G+ I+ P ++++ +
Sbjct: 409 NGIAYSWGFGETYAVGLGPSGDDIE-IPTRIKNTA 442
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 60/273 (21%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G +LG K P L K + K A G H++AL+S+ +
Sbjct: 45 IFCWGSGPMCELGLGPLAKNKEVKRPRLNPFLSKD--EVKIVSFAVGGMHTIALDSDMNV 102
Query: 313 YAFGRHDYGRLGLKN--VSEPVT------------------EPTP-------IPSLQD-K 344
+++G +D G LG SE + E TP P L D
Sbjct: 103 WSWGCNDVGALGRDTSGASEKLKDMDADDSSDDDDGDLNELESTPHKIPRENFPPLADGH 162
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S + S G +Y WG ++ G I F + + + +
Sbjct: 163 KVVQLAATDNMSCILFSNGDVYAWGT---FRCNEG-----------ILGFYQEE---IKI 205
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+N P +P+ I +A G +D EGV++ WG G +QLG ++
Sbjct: 206 QNT------PWKVPNFSKYQIVQLAPGKDHMLFLDEEGVVFAWGNGQQHQLGR----KVM 255
Query: 465 EPMKIEGKQLNNYTVLQV---ASGGQHSVILAK 494
E +++ + + QV ASG H + K
Sbjct: 256 ERFRLKTLDPRPFGLKQVKYIASGENHCFAIKK 288
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 219/482 (45%), Gaps = 61/482 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G +GQLG G +R T V LD+VV V G H++ L EDG V+ WG N
Sbjct: 128 GSVWTWGGNSSGQLGDG-TTTDRATPMRVAGLDSVVAVAAGDFHSLALREDGTVWAWGTN 186
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LGR P+ V V ++AG ++A+LEDGTV AWGS + G +G
Sbjct: 187 FHGQLGR-GHTQPGLTPEQVPGLNGVVALAAGFDFTLAVLEDGTVRAWGS--NGSGQLG- 242
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G Q+ +P+K+ +SGI ++ +G H + L G + T G GQLG T
Sbjct: 243 DGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWND---- 298
Query: 216 ARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
R + PG +K +D + +T G++ A+G N QLG+ D+
Sbjct: 299 --RAVPMQVPGLERVKAVASMDSDSLALLDT-----GAVFAWGANGSGQLGDGDT----- 346
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T TP + L + G H+L L +G ++A+G G+LG V
Sbjct: 347 --TDRATPGPVPGL--NAVASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHV-- 400
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
P P ++ +TS+A G+ S A +G ++ WG QLG+G +
Sbjct: 401 -VPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVRVEGLG 459
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ +G ++A+GR+ G+LG + P +P L ++T++A
Sbjct: 460 GVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLG-DGTTLDRARPVAVPGL--TSVTAVAA 516
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G A+ S+G ++ WG QLG+G D L P+++ G V+ VA+G S+
Sbjct: 517 GGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGLG----AVVAVAAGSYFSM 572
Query: 491 IL 492
L
Sbjct: 573 AL 574
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 205/452 (45%), Gaps = 62/452 (13%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L+N+V VV G H++ L DG V+TWG N G LG D P V V ++A
Sbjct: 108 LENIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTD-RATPMRVAGLDSVVAVAA 166
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
GD HS+AL EDGTV+AWG+ + HG +G TP ++ ++G+V +A+G D + +
Sbjct: 167 GDFHSLALREDGTVWAWGT--NFHGQLGRGHTQPGLTPEQVPGLNGVVALAAGFDFTLAV 224
Query: 188 TSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
G + G GQL G TQR L P +V + I +V G Y+
Sbjct: 225 LEDGTVRAWGSNGSGQLGDGTSTQR------------LSPVKVS-ELSGITEVRAGTYHA 271
Query: 246 FISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
K G + +G N QLG+ + P + L ++ +AS SL
Sbjct: 272 LALGKDGGVWTWGSNASGQLGDGTWNDRA-------VPMQVPGL--ERVKAVASMDSDSL 322
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL G ++A+G + G+LG + ++ T P P+P L + S+ G + + +G
Sbjct: 323 ALLDTGAVFAWGANGSGQLGDGDTTDRAT-PGPVPGL--NAVASVVGGAQHALVLRKDGT 379
Query: 365 LYGWGMGNGYQLGN-GKEDDILNS-----------------------EGKIYAFGRHDYG 400
L+ WG G QLG+ G E ++ + +G ++A+GR+ YG
Sbjct: 380 LWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYG 439
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+LG + +E + + S+A S A+ +G ++ WG QLG+G
Sbjct: 440 QLGDGSTAE---RHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTT 496
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
D P+ + G +V VA+GG H + L
Sbjct: 497 LDRARPVAVPGLT----SVTAVAAGGSHVLAL 524
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 212/452 (46%), Gaps = 59/452 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G +GQLG G + +R A VE L N V V VG H + + EDG ++ WG N
Sbjct: 878 GSVWSWGGNASGQLGDG-TLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAWGAN 936
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG S P V ++ ++AG + SVA+ +DGT +AWG+ + G +G
Sbjct: 937 GSGQLGDGGTAPS-LTPVRVKGLERVASVAAGRAFSVAVRDDGTAWAWGT--NPSGQLGD 993
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P ++ S+ GI +++GA H V L++ G + T G GQLG +
Sbjct: 994 GTNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQLG---------DG 1044
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+ + P +VP R ++ V G + + G+ A+G N Y QLG+ + Q
Sbjct: 1045 SSSPTGMWPRQVPELRG-VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQ--- 1100
Query: 276 NTCFFTPHLIK----SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
TP +K + T+ A GQH + + S+G + +G + +G+LG +
Sbjct: 1101 ----LTPMAVKIEGPKIRPPVRTVRAWGQHAVVQM-SDGTVQTWGDNTFGQLGDGTTTR- 1154
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKED-------- 382
P+ ++ +++ G S A+ S+G ++ WG NG+ QLG+G
Sbjct: 1155 --RAVPLTVYGLASVVAVSSGAWHSLALLSDGTVWAWGA-NGFGQLGDGTSTPRTRPVQV 1211
Query: 383 ----DILN------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
D++ S+G ++ +G + +G+LG +E + PT + L+ +
Sbjct: 1212 AGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLG-DGTAESRSLPTRVEGLEG--VV 1268
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
++A G+ S A+ S+G L WG QLG+G
Sbjct: 1269 AVAGGDHYSLALHSDGTLSAWGNNASGQLGDG 1300
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 212/485 (43%), Gaps = 70/485 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G+G GQLG G V +R + VE L N+ V G H + + DG V+ WG N
Sbjct: 578 GTVWTWGEGFEGQLGDGGGV-QRLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGDN 636
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EG LG + D F P V + +S G SHS+AL DGTV AWG + +G +G
Sbjct: 637 GEGQLGDGSWAD-RFRPVQVPGLQGITAVSGGRSHSMALQGDGTVRAWG--YNGYGQLGD 693
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P + ++GI + H + L + G L G GQL
Sbjct: 694 GTLTSRVRPALIPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQL------------ 741
Query: 217 RRGMSFLEPGEVPLKRK---HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
G+ VP++ + +D + G +T + + G+++A+G N QLG+ S
Sbjct: 742 --GLGAAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTS-TH 798
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
++G ++S +ASG HSLAL +G ++A+G + G+LG +
Sbjct: 799 RTGPVSVPGVPCVRS--------VASGIQHSLALACDGTVWAWGANARGQLG-----DGT 845
Query: 333 TEPTPIPSLQD--KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
T P P L + + + ++A G S A+ ++G ++ WG QLG+G D
Sbjct: 846 TTPRVTPGLVEGLRGVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDRALPAHV 905
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
+ +G ++A+G + G+LG + P P + L+ +
Sbjct: 906 EHLSNAVAVAVGETHALAVGEDGALWAWGANGSGQLG-DGGTAPSLTPVRVKGLE--RVA 962
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
S+A G S A+ +G + WG QLG+G P Q+ + ++ S G
Sbjct: 963 SVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVP-----NQVTSLKGIRAMSAG 1017
Query: 487 QHSVI 491
H V+
Sbjct: 1018 AHHVV 1022
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 221/479 (46%), Gaps = 69/479 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G +GQLG G + R V L + + G H V L+ DG V+TWG N
Sbjct: 978 GTAWAWGTNPSGQLGDGTN-HARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDN 1036
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + P+ V + ++AG+ +VA+L DGT AWGS + +G +G
Sbjct: 1037 TLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGS--NEYGQLGD 1094
Query: 157 KGEGIQKTPLKLESVSG------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G Q TP+ ++ + G + + + H V+ S G + T G GQLG T
Sbjct: 1095 GKTGPQLTPMAVK-IEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGT-- 1151
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISSKGSILAFGLNNYSQLGE 266
RR VPL + V +G +++ + S G++ A+G N + QLG+
Sbjct: 1152 ----TTRR--------AVPLTVYGLASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGD 1199
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
S T P + L D + SG +H+LA+ S+G ++ +G + +G+LG
Sbjct: 1200 GTS-------TPRTRPVQVAGLGD--VVAIGSGGYHALAVCSDGSVWTWGYNAFGQLG-D 1249
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------- 379
+E + PT + L+ + ++A G+ S A+ S+G L WG QLG+G
Sbjct: 1250 GTAESRSLPTRVEGLEG--VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTRYS 1307
Query: 380 -----------------KEDDILNSEGKIYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQ 421
L +G ++ +G + +G+LG + + P P+P+L
Sbjct: 1308 RVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNL- 1366
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+++++ G +FA+ +G ++ WG + QLG G + EP+++ ++L++ TV+
Sbjct: 1367 -SSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRV--RELSDVTVV 1422
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 154/340 (45%), Gaps = 38/340 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G R V L +VV V G H++ L DG V+ WG N
Sbjct: 1134 GTVQTWGDNTFGQLGDG-TTTRRAVPLTVYGLASVVAVSSGAWHSLALLSDGTVWAWGAN 1192
Query: 97 DEGALGREAEGDSEFIPQT----VNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D P+T V V I +G H++A+ DG+V+ WG +
Sbjct: 1193 GFGQLG-----DGTSTPRTRPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWG-----YN 1242
Query: 153 SMGLKGEGIQKT---PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+ G G+G ++ P ++E + G+V +A G + + L S G L G GQLG T
Sbjct: 1243 AFGQLGDGTAESRSLPTRVEGLEGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGT- 1301
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+R +R ++ V R + + G++ +G N + QLG+
Sbjct: 1302 -GTTRYSR--VAVKGVDGVVDVRAGA------THTVALRGDGTVWTWGDNAFGQLGDG-- 1350
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
SG P + +LS + + +G H+ A+ +G ++ +GR+ +G+LGL + +
Sbjct: 1351 ---ASGTRMRLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNT 1405
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
TEP + L D T+ ++ G S A+ +G + WG
Sbjct: 1406 NR-TEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWG 1442
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 20/233 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G R VE L+ VV V G +++ L DG + WG N
Sbjct: 1234 GSVWTWGYNAFGQLGDG-TAESRSLPTRVEGLEGVVAVAGGDHYSLALHSDGTLSAWGNN 1292
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + G + + V V + AG +H+VAL DGTV+ WG G
Sbjct: 1293 ASGQLG-DGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGA 1351
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
G ++ P + ++S + + +GA H + +G + T G GQLG N
Sbjct: 1352 SGTRMRLVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLG------LGDNT 1405
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLG 265
R PL+ + + DV ++ + G++L++G + Y LG
Sbjct: 1406 NR--------TEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLG 1450
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G+ GQLGLG D R V +L +V V G ++ + DG V +WG +
Sbjct: 1386 GTVWTWGRNSHGQLGLG-DNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGSS 1444
Query: 97 DEGALGREAEGDSEFIPQTVNLP 119
G+LG A G P V LP
Sbjct: 1445 LYGSLGLGATGHRSS-PGQVALP 1466
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 227/487 (46%), Gaps = 73/487 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G +R V+ L VV VG H++ L DG V+ WG N
Sbjct: 265 GTVWTWGANSFGQLGDGTK-SDRLVPVRVQGLSGVVASDVGSYHSLALRSDGSVWAWGHN 323
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG ++ S +P V + ++AG SHS+A+ DGTV+AWGS G
Sbjct: 324 SSGQLGDDSS-TSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFS-----GE 377
Query: 157 KGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+GEG + +P++++ + G V +A+G +H + S G++ G + GQLG T R+++
Sbjct: 378 RGEGTTNNRASPVQVQGLGGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNST 437
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSILAFGLNNYSQLGEADS 269
P++ + + V ++ + S GS+ A+G N Y QLGE +
Sbjct: 438 S--------------PVQVQGLSGVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
T L+ +A+G +HSLA+ S+G ++ +G + YG+LG S
Sbjct: 484 -----------TNRLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTS 532
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
+ P + L + ++A G+ S A+ S+G ++ WG + +LG+G +
Sbjct: 533 NRLV-PVQVQGLSG--VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGR 589
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
++ S+G ++ +G + +G LG + + P + L +
Sbjct: 590 VPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELG-DGTTTSRSVPVQVQGLSG--V 646
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
++ GN S A+ S+G ++ WG + QLG+G P+++ G V+ +A+G
Sbjct: 647 VAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLS----GVVAMATG 702
Query: 486 GQHSVIL 492
H +++
Sbjct: 703 ALHPLVV 709
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 229/485 (47%), Gaps = 69/485 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G M R T V+ L VV V G +++ + DG V+ WG N
Sbjct: 115 GTVWAWGSNSDGQLGDGTTTM-RLTPVRVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSN 173
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + +P V V ++AG SHS+A+L DG+V+AWG+ +S G +G
Sbjct: 174 FSGQLG-DGTTSNRLVPVQVPGLSGVVSVAAGSSHSLAVLSDGSVWAWGA--NSSGQLG- 229
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G I + P+++ +SG+V +A+GA H + + S G + T G GQLG T+
Sbjct: 230 DGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDR--- 286
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
VP++ + + V G Y++ + S GS+ A+G N+ QLG+ DS
Sbjct: 287 -----------LVPVRVQGLSGVVASDVGSYHSLALRSDGSVWAWGHNSSGQLGD-DSST 334
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+S P ++ LS + +G HSLA+ S+G ++A+G + G G + +
Sbjct: 335 SRS------VPVQVRGLSGGM--AVTAGSSHSLAVGSDGTVWAWGSNFSGERG-EGTTNN 385
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
P + L ++A G S A S+G ++ WG + QLG+G +
Sbjct: 386 RASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQ 443
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L S+G ++A+G + YG+LG E T +P + +
Sbjct: 444 GLSGVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLG-----EGTTTNRLVPVQVLSGVVA 498
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+A G+ S A+ S+G ++ WG QLG+G + L P++++G V VA+G
Sbjct: 499 VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLS----GVAAVAAGSF 554
Query: 488 HSVIL 492
HS+ +
Sbjct: 555 HSLAV 559
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 216/482 (44%), Gaps = 63/482 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G + R V L VV V G H++ + DG V+TWG N
Sbjct: 215 GSVWAWGANSSGQLGDGTKI-NRLVPVQVPGLSGVVAVAAGAAHSLAVRSDGTVWTWGAN 273
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + D +P V V G HS+AL DG+V+AWG +S G +G
Sbjct: 274 SFGQLGDGTKSD-RLVPVRVQGLSGVVASDVGSYHSLALRSDGSVWAWG--HNSSGQLGD 330
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRN 215
+ P+++ +SG + + +G+ H + + S G + G G+ G T AS
Sbjct: 331 DSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPV 390
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKS 274
+G+ G V V G ++ + S GS+ A+G N+ QLG+ + S
Sbjct: 391 QVQGLG----GGVA--------VAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTS 438
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P ++ LS +A+G HSLAL S+G ++A+G + YG+LG E T
Sbjct: 439 -------PVQVQGLS--GVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLG-----EGTTT 484
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL--------- 385
+P + ++A G+ S A+ S+G ++ WG QLG+G + L
Sbjct: 485 NRLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLS 544
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+S+G ++A+G + G LG S + P +P L ++A
Sbjct: 545 GVAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV-PGRVPGLSGG--VAVAA 601
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S + S+G ++ WG + +LG+G P++++G V+ V +G HS+
Sbjct: 602 GGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS----GVVAVDAGNSHSL 657
Query: 491 IL 492
+
Sbjct: 658 AV 659
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 170/344 (49%), Gaps = 28/344 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G D+GQLG G + V+ L VV V G H++ L DG V+ WG N
Sbjct: 415 GSVWAWGSNDSGQLGDGT-TRNSTSPVQVQGLSGVVAVAAGFDHSLALRSDGSVWAWGSN 473
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG E + +P V + V ++AG +HS+A+ DGTV+ WGS + +G +G
Sbjct: 474 AYGQLG-EGTTTNRLVP--VQVLSGVVAVAAGSNHSLAVRSDGTVWTWGS--NLYGQLGD 528
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P++++ +SG+ +A+G+ H + + S G++ G G+LG T +++R
Sbjct: 529 GTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGT--TSNR-- 584
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
L PG VP + G ++ + S G++ +G N++ +LG+ +
Sbjct: 585 ------LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTT------- 631
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
T P ++ LS + +G HSLA+ S+G ++ +G + YG+LG + + P
Sbjct: 632 TSRSVPVQVQGLS--GVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLG-DGTTTRRSVPV 688
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+P L + ++A G + S+G ++ WG + QLGNG
Sbjct: 689 QVPGLSG--VVAMATGALHPLVVRSDGTVWAWGYNSFGQLGNGS 730
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 223/502 (44%), Gaps = 104/502 (20%)
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--K 120
A + D + + G +++ L DG V+ G ND G LG +G + V +P
Sbjct: 40 APLRDAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLG---DGTTTNHSAPVQVPGLS 96
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
V ++AG SHS+A+ DGTV+AWGS +S G +G ++ TP++++ +SG+V +A+G
Sbjct: 97 GVVAVAAGSSHSLAVRHDGTVWAWGS--NSDGQLGDGTTTMRLTPVRVQGLSGVVSVAAG 154
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
+ + + + S G + G GQLG T +++R L P +VP +
Sbjct: 155 SSYSLAVRSDGTVWAWGSNFSGQLGDGT--TSNR--------LVPVQVPGLSGVVSVAAG 204
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGE--------------------------------AD 268
++ + S GS+ A+G N+ QLG+ +D
Sbjct: 205 SSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSD 264
Query: 269 SEVQKSGNTCF-----------FTPHLIKSLSDKKFTMLAS--GQHHSLALNSEGKIYAF 315
V G F P ++ LS ++AS G +HSLAL S+G ++A+
Sbjct: 265 GTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSG----VVASDVGSYHSLALRSDGSVWAW 320
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW------- 368
G + G+LG + S + P + L ++ G+ S A+ S+G ++ W
Sbjct: 321 GHNSSGQLG-DDSSTSRSVPVQVRGLSGG--MAVTAGSSHSLAVGSDGTVWAWGSNFSGE 377
Query: 369 ----------------GMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G+G G + G + S+G ++A+G +D G+LG +
Sbjct: 378 RGEGTTNNRASPVQVQGLGGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLG-DGTTRNS 436
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIE 470
T P + L + ++A G S A+ S+G ++ WG N Y QLG G + L P+++
Sbjct: 437 TSPVQVQGLSG--VVAVAAGFDHSLALRSDGSVWAWGS-NAYGQLGEGTTTNRLVPVQVL 493
Query: 471 GKQLNNYTVLQVASGGQHSVIL 492
V+ VA+G HS+ +
Sbjct: 494 SG------VVAVAAGSNHSLAV 509
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 36/309 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G V+ L VV V G H++ + DG V+TWG N
Sbjct: 465 GSVWAWGSNAYGQLGEG---TTTNRLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSN 521
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + +P V ++AG HS+A+ DG+V+AWGS +S G +G
Sbjct: 522 LYGQLG-DGTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVWAWGS--NSSGELGD 578
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P ++ +SG V +A+G H +++ S G + T G G+LG T S S
Sbjct: 579 GTTSNRLVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRS--- 635
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
VP++ + + V ++ + S G++ +G N+Y QLG+ + +
Sbjct: 636 -----------VPVQVQGLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRR 684
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P + LS +A+G H L + S+G ++A+G + +G+LG P+
Sbjct: 685 S-------VPVQVPGLS--GVVAMATGALHPLVVRSDGTVWAWGYNSFGQLGNG---SPL 732
Query: 333 TEPTPIPSL 341
T I SL
Sbjct: 733 FATTAIRSL 741
>gi|302509916|ref|XP_003016918.1| hypothetical protein ARB_05212 [Arthroderma benhamiae CBS 112371]
gi|291180488|gb|EFE36273.1| hypothetical protein ARB_05212 [Arthroderma benhamiae CBS 112371]
Length = 488
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 193/410 (47%), Gaps = 68/410 (16%)
Query: 39 VLTCGQGDTGQLGLGP-DVMERKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYTW 93
V G G + +LGLGP + ++ K L +LD VV++ GGMH LT D + TW
Sbjct: 47 VYVFGSGSSAELGLGPKNAIDVKRPRLNTNLDAEKVGVVDIGAGGMHAAALTHDNHILTW 106
Query: 94 GCNDEGALGRE----------AEGDSEFIPQTVNL-PKKAV----------------QIS 126
G ND ALGRE AE D V L P++A+ Q++
Sbjct: 107 GVNDNCALGRETTWDGGLKDMAEDDESVASDEVELNPREAIPTAIPREKFPDDTKFCQVA 166
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGI--QKTPLKLESVSGIVKIASGADH 183
AGDS + AL EDG VY WGSF + G G GE I Q P+ + + IV+I++G +
Sbjct: 167 AGDSATFALTEDGFVYGWGSFVTTEGERGWWNGELIKMQSDPVMIPGLEKIVQISAGNNF 226
Query: 184 FVMLTSRGNLLTAGCPEQGQLGR---------ITQRSASRNARRGMSFLEPGEVPL-KRK 233
+ L RG + + G PEQ QLGR + ++AS + R L PG V L K K
Sbjct: 227 CLALDHRGRVFSWGRPEQDQLGRHIRVDRRKTASNKNASIDKLRNDIGLIPGLVALPKSK 286
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G ++F I S G +GLNN+ Q + K G+T P L +K
Sbjct: 287 RIISIHAGSDHSFAIDSNGDTWTWGLNNFGQTA-VNVGAGKGGST-IVRPQKATMLIGQK 344
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----NVSEP------------VTEPT 336
M+ G+HHS+ + +G+ +GR D ++G+ ++ +P + EPT
Sbjct: 345 LKMIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDHSTLHLDDPHIVISERGKPRILLEPT 404
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDIL 385
P+P A G+ + I SEG Y WG+ YQ G G + DDIL
Sbjct: 405 PLPI---PNCAFAAAGSDHNVLITSEGKAYTWGINATYQCGQGPDTDDIL 451
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 170/442 (38%), Gaps = 101/442 (22%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTP-----LKLESVSGIVKIASGADHFVMLTSRGNLLT 195
VY +GS + +G K K P L E V G+V I +G H LT ++LT
Sbjct: 47 VYVFGSGSSAELGLGPKNAIDVKRPRLNTNLDAEKV-GVVDIGAGGMHAAALTHDNHILT 105
Query: 196 AGCPEQGQLGRIT-------------QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
G + LGR T + AS P +P ++ D F V
Sbjct: 106 WGVNDNCALGRETTWDGGLKDMAEDDESVASDEVELNPREAIPTAIPREKFPDDTKFCQV 165
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD-------KKFTM 295
+ G F L + S V G ++ LIK SD +K
Sbjct: 166 ------AAGDSATFALTEDGFVYGWGSFVTTEGERGWWNGELIKMQSDPVMIPGLEKIVQ 219
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL------------KNVS--EPVTEPTPIPSL 341
+++G + LAL+ G+++++GR + +LG KN S + + IP L
Sbjct: 220 ISAGNNFCLALDHRGRVFSWGRPEQDQLGRHIRVDRRKTASNKNASIDKLRNDIGLIPGL 279
Query: 342 ----QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ---------------------- 375
+ K I SI G+ SFAIDS G + WG+ N Q
Sbjct: 280 VALPKSKRIISIHAGSDHSFAIDSNGDTWTWGLNNFGQTAVNVGAGKGGSTIVRPQKATM 339
Query: 376 --------LGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKN----VSEP------------ 410
+ G+ I + +G+ +GR D ++G+ + + +P
Sbjct: 340 LIGQKLKMIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDHSTLHLDDPHIVISERGKPRI 399
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKI 469
+ EPTP+P A G+ + I SEG Y WG+ YQ G G + DDIL KI
Sbjct: 400 LLEPTPLPI---PNCAFAAAGSDHNVLITSEGKAYTWGINATYQCGQGPDTDDILVATKI 456
Query: 470 EGKQLNNYTVLQVASGGQHSVI 491
+ L +GGQ+S++
Sbjct: 457 DNPSLREKVFSWAGAGGQYSIL 478
>gi|213409582|ref|XP_002175561.1| RCC1 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212003608|gb|EEB09268.1| RCC1 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 185/385 (48%), Gaps = 58/385 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVME-----RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G G +LG+ D ++ R +L + VV + VGGMHT +T DG+V TW
Sbjct: 83 VYVFGSGSMNELGMADDDVDVIYRPRLNPSLTREKAGVVTLAVGGMHTAVVTHDGRVLTW 142
Query: 94 GCNDEGALGR----EAEGDSEFI--------PQTVN---LPKKAVQISAGDSHSVALLED 138
G ND+ ALGR + + D E I P V L K V++ D+ +VA+ ++
Sbjct: 143 GVNDDFALGRLTKNQVDEDGEPIDNDTLEGTPYPVEGELLNKHVVKVVCSDNLTVAITDE 202
Query: 139 GTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
G YAWG+FR S G +G + +P K++ + + +A G DH + LT+ G + G
Sbjct: 203 GECYAWGTFRCSDGILGFSATQKHSPSPTKID-IPEVADVAVGTDHVLALTTAGQVYAWG 261
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTF-ISSKGSIL 254
+Q QLGR + + G VP L K+I V G Y++F + G +
Sbjct: 262 NGQQCQLGREIPEAVRKE----------GLVPHLLNLKNILAVGAGSYHSFAVDRDGRVY 311
Query: 255 AFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
A+GLN Q G E + E P L+++L+ K + G+HHS+A+ G+
Sbjct: 312 AWGLNAARQCGIYYENNDE-----GVIVKEPTLVEALAPFKVESITGGEHHSMAILRGGR 366
Query: 312 IYAFGRHDYGRLGLKNVSEPVTE-------------PTPIPSLQDKTITSIACGNCVSFA 358
+ A+GRHD +LG+ P T PT +PSL D I + CG + A
Sbjct: 367 VLAWGRHDRHQLGIPEEELPSTVLRDDRGNIYSVPIPTIVPSLVD--IVQVCCGTHHNLA 424
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
ID G + WG G Y++G G +D+
Sbjct: 425 IDKHGKAFSWGSGENYEVGQGTDDE 449
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 160/380 (42%), Gaps = 70/380 (18%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR-------RGMSFLE 224
+G+V +A G H ++T G +LT G + LGR+T+ + G +
Sbjct: 118 AGVVTLAVGGMHTAVVTHDGRVLTWGVNDDFALGRLTKNQVDEDGEPIDNDTLEGTPY-- 175
Query: 225 PGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ--LGEADSEVQKSGNTCFFT 281
P E L KH+ V T I+ +G A+G S LG + ++ T
Sbjct: 176 PVEGELLNKHVVKVVCSDNLTVAITDEGECYAWGTFRCSDGILGFSATQKHSPSPTKIDI 235
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P + +A G H LAL + G++YA+G +LG + + E V + +P L
Sbjct: 236 PEVAD---------VAVGTDHVLALTTAGQVYAWGNGQQCQLG-REIPEAVRKEGLVPHL 285
Query: 342 QD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDDILNSE-------- 388
+ K I ++ G+ SFA+D +G +Y WG+ Q G N E I+
Sbjct: 286 LNLKNILAVGAGSYHSFAVDRDGRVYAWGLNAARQCGIYYENNDEGVIVKEPTLVEALAP 345
Query: 389 -------------------GKIYAFGRHDYGRLGLKNVSEPVTE-------------PTP 416
G++ A+GRHD +LG+ P T PT
Sbjct: 346 FKVESITGGEHHSMAILRGGRVLAWGRHDRHQLGIPEEELPSTVLRDDRGNIYSVPIPTI 405
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMKIEGKQLN 475
+PSL D I + CG + AID G + WG G Y++G G +D D+ P I K +
Sbjct: 406 VPSLVD--IVQVCCGTHHNLAIDKHGKAFSWGSGENYEVGQGTDDEDVAIPTLIRSKAIK 463
Query: 476 NYTVLQVASGGQHSVILAKP 495
+ + V +GGQ SVI P
Sbjct: 464 DVAIKVVGAGGQFSVIAGLP 483
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 229/485 (47%), Gaps = 65/485 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G + R+T V+ L V V G H++ L DG V+ WG N
Sbjct: 67 GTVWTTGGNGHGQLGDGT-TLSRRTPVQVQGLSGVAAVAAGHGHSLALRYDGTVWAWGNN 125
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + D+ +P V V + AGD+HS+A+ DG+V+AWG R++ G +G
Sbjct: 126 AYGQLGDDTR-DNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDGSVWAWG--RNTSGQLGD 182
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P+++ +SG+V +A+G +H + + S G++ G GQLG + +
Sbjct: 183 GTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAY---- 238
Query: 217 RRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
VP + + + V G Y++ + G++ A+G N Y QLG+ E
Sbjct: 239 ----------PVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE-- 286
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
GN+ + P + L +++G +HSL + S+G ++A+G + YG+LG + +
Sbjct: 287 --GNSRWL-PKQVPGLG--GVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAH-- 339
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------- 384
+P+ L ++A G S ++S+G L+ WG Q G+G
Sbjct: 340 -AASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPG 398
Query: 385 ----------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
L S+G ++A+G + G+LG P +P L + ++
Sbjct: 399 LSGVVSVAAGGGHVLALLSDGTVWAWGDNASGQLG-DGTRHSRWVPRQVPELSG--VVAV 455
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
A G+ S A+ +G ++ WG N Y QLG+G D P+ + ++L+ V+ VA+G
Sbjct: 456 AAGSSFSLAVRYDGSVWSWG-DNAYGQLGHGSTDASSVPLHV--RELSE--VVAVAAGSM 510
Query: 488 HSVIL 492
H++ +
Sbjct: 511 HALAV 515
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 224/513 (43%), Gaps = 106/513 (20%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG P+ + VED+ VV V G H++ + DG V+ WG N
Sbjct: 217 GSVWAWGNNASGQLGGAPEAAYPVPW-RVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDN 275
Query: 97 DEGALGR-EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS--------- 146
G LG + EG+S ++P+ V V +SAG HS+ + DGTV+AWG+
Sbjct: 276 LYGQLGDGKLEGNSRWLPKQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGG 335
Query: 147 -----------------------FR-----DSHGSM--------GLKGEGI---QKTPLK 167
+R +S G++ G +G+G TP +
Sbjct: 336 SRAHAASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGR 395
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
+ +SG+V +A+G H + L S G + G GQLG +R++R P +
Sbjct: 396 VPGLSGVVSVAAGGGHVLALLSDGTVWAWGDNASGQLG-----DGTRHSR-----WVPRQ 445
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
VP + ++ + GS+ ++G N Y QLG ++ P ++
Sbjct: 446 VPELSGVVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASS-------VPLHVRE 498
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL--GLKNVSEPVTEPTPIPSLQDKT 345
LS+ +A+G H+LA+ ++G ++ +G +DYG+L G + +S P +P L
Sbjct: 499 LSE--VVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSG-- 554
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-------------------- 385
+ S+A S A+ ++G ++ WG +LG+G L
Sbjct: 555 MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAPGTVALLSAGYNY 614
Query: 386 ----NSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKTITSIACGNCVSFAI 438
++G ++A+G + G+LG + + PV P+ + +++A G S A+
Sbjct: 615 SMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRA------STLAAGQSHSMAV 668
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
S+G L+ WG QLG+G P+++ G
Sbjct: 669 GSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPG 701
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 210/447 (46%), Gaps = 74/447 (16%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H++ + DG V+T G N G LG + S P V ++AG HS+AL DG
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLG-DGTTLSRRTPVQVQGLSGVAAVAAGHGHSLALRYDG 117
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
TV+AWG+ +++G +G + P+++ +SG+V + +G H + + S G++ G
Sbjct: 118 TVWAWGN--NAYGQLGDDTRDNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDGSVWAWGRN 175
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILA 255
GQLG +R+ R VP++ + V + G ++ + S GS+ A
Sbjct: 176 TSGQLG-----DGTRDDR---------AVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWA 221
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG A + P ++ +S +A+GQ+HSLA+ +G ++A+
Sbjct: 222 WGNNASGQLGGAP-------EAAYPVPWRVEDVS--GVVAVAAGQYHSLAVRYDGTVWAW 272
Query: 316 GRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
G + YG+LG L+ S + P +P L + +++ G S + S+G ++ WG N
Sbjct: 273 GDNLYGQLGDGKLEGNSRWL--PKQVPGL--GGVVAVSAGFYHSLVVRSDGTVWAWG-NN 327
Query: 373 GY-QLGNG------------------------KEDDILNSEGKIYAFGRHDYGRLGLKNV 407
Y QLG G + ++NS+G ++A+G + G+ G +
Sbjct: 328 AYGQLGGGSRAHAASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTL 387
Query: 408 SEPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ PTP +P L + S+A G A+ S+G ++ WG QLG+G
Sbjct: 388 TR---YPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWV 442
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVIL 492
P ++ +L+ V+ VA+G S+ +
Sbjct: 443 PRQV--PELSG--VVAVAAGSSFSLAV 465
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 33/346 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G R V +L VV V G ++ + DG V++WG N
Sbjct: 419 GTVWAWGDNASGQLGDGTR-HSRWVPRQVPELSGVVAVAAGSSFSLAVRYDGSVWSWGDN 477
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + D+ +P V + V ++AG H++A+ DGTV+ WG F D +G +G
Sbjct: 478 AYGQLGHGST-DASSVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWG-FND-YGQLGD 534
Query: 157 KGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
EGI + +P+++ +SG+V +A+ H + + + G + G +LG T
Sbjct: 535 GFEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGT----- 589
Query: 214 RNARR--GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
RR + PG V L + Y+ + + GS+ A+G N QLG+ +
Sbjct: 590 -TTRRLVPLRVNAPGTVALLSAGYN------YSMAMRADGSLWAWGTNFAGQLGDGST-- 640
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
T P ++ + + LA+GQ HS+A+ S+G ++A+G + G+LG ++
Sbjct: 641 -----TSRAVP--VRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHH 693
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
P +P + + +S A+ S+G L+ WG + QLG
Sbjct: 694 AL-PVRVPGMSGVVAVDVTL--NLSLAVRSDGSLWAWGNNDVGQLG 736
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 18/252 (7%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNVVEV 74
S+ V V + ++ L + G V G D GQLG G + + + ++ V+ L +V V
Sbjct: 500 SEVVAVAAGSMHALAVRADG-TVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGMVSV 558
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
H++ + DG V+ WG N + LG + +P VN P +SAG ++S+A
Sbjct: 559 AADFGHSLAVRADGTVWAWGNNTDSELG-DGTTTRRLVPLRVNAPGTVALLSAGYNYSMA 617
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLL 194
+ DG+++AWG+ + G +G + P++++ +A+G H + + S G L
Sbjct: 618 MRADGSLWAWGT--NFAGQLGDGSTTSRAVPVRVQGPVRASTLAAGQSHSMAVGSDGFLW 675
Query: 195 TAGCPEQGQLGRITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
G +GQLG T + R GMS + +V L + + S GS+
Sbjct: 676 AWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVTLN-----------LSLAVRSDGSL 724
Query: 254 LAFGLNNYSQLG 265
A+G N+ QLG
Sbjct: 725 WAWGNNDVGQLG 736
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 226/469 (48%), Gaps = 57/469 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V CG+ D GQLG + ++ + VE L+ V + G +++ L DG V+TWG N
Sbjct: 194 GTVWACGENDYGQLG-NNNTIDINSPIPVEGLNKVSSISAGKYYSMALKSDGTVWTWGEN 252
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG + + P V + IS+G+SHS+AL +DGTV+AWG + G +G
Sbjct: 253 DYGQLG-DGTTATRLSPVQVQNLSGIIAISSGNSHSLALKDDGTVWAWGD--NESGQLGD 309
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P +++ +SGIV I+ G + + L + G + G GQLG T + RN
Sbjct: 310 GTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGT--TTDRNT 367
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+S L+ + + GV ++ + + G++ +G N + QLG+ + S
Sbjct: 368 AVPVSGLD---------GVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDG---TKVSK 415
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
NT L + G HS+AL +G ++A+G + YG+LG T P
Sbjct: 416 NTAVPISGL------DGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTT-P 468
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG------MGNGY-----------QLGN 378
+ + +L I SI CG SFA+ +G ++ WG +G G+ +G+
Sbjct: 469 SQVSNLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLNIGD 526
Query: 379 GKEDDI-------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
K I L ++G ++A+G + YG+LG + + P+ IT+I+ G
Sbjct: 527 IKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTT---IKSLPVQVSGISGITAISAG 583
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
S A+ S+G ++ WG N QLG+G ++D P+++ +L+ TV+
Sbjct: 584 GSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVS--ELSGITVI 630
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 232/523 (44%), Gaps = 97/523 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G+ D GQLG G R + V++L ++ + G H++ L +DG V+ WG N
Sbjct: 244 GTVWTWGENDYGQLGDGT-TATRLSPVQVQNLSGIIAISSGNSHSLALKDDGTVWAWGDN 302
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ G LG + +S++IP V V IS G +S+AL DGTV+ WG ++ G +G
Sbjct: 303 ESGQLG-DGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGTVWVWGD--NTSGQLGD 359
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---RITQRSA- 212
+ T + + + G++ IA G +H + L + G + T G GQLG ++++ +A
Sbjct: 360 GTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAV 419
Query: 213 -----------SRNARRGMSFLEPGEV---------------------PLKRKH---IDD 237
+ M+ + G V P + + I
Sbjct: 420 PISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKS 479
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI---KSLSDKKF 293
+F G +F + G++ A+G N Y +LG+ FT +I ++L+
Sbjct: 480 IFCGYSTSFALKPDGTVWAWGNNEYGELGKG------------FTTRVIYPTETLNIGDI 527
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
++ G H LAL ++G ++A+G + YG+LG + + P+ IT+I+ G
Sbjct: 528 KAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTT---IKSLPVQVSGISGITAISAGG 584
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEG 389
S A+ S+G ++ WG N QLG+G ++D L ++G
Sbjct: 585 SHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDG 644
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
++ +G Y L L E +T P I L I +I CG + A+ ++G ++ WG
Sbjct: 645 TVWVWGSDSY-NLPL----EKMTMPIQISGLSG--IIAIECGTYHNLALKNDGTVWAWGK 697
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
N Q G+G P+++ G V +A GG S+ L
Sbjct: 698 NNFGQFGDGTTTTTNIPVQVSGLS----GVKAIAVGGNRSIAL 736
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 206/447 (46%), Gaps = 58/447 (12%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
+++V G HT+ L DG V+ G ND G LG D P V K ISAG
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINS-PIPVEGLNKVSSISAGKY 235
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
+S+AL DGTV+ WG + +G +G + +P++++++SGI+ I+SG H + L
Sbjct: 236 YSMALKSDGTVWTWG--ENDYGQLGDGTTATRLSPVQVQNLSGIIAISSGNSHSLALKDD 293
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
G + G E GQLG T S ++ +G+S G V + Y+ + +
Sbjct: 294 GTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS----GIVSISCGF-------YYSMALKN 342
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ +G N QLG+ + + NT L ++ +A G +HS+AL ++
Sbjct: 343 DGTVWVWGDNTSGQLGDGTTTDR---NTAVPVSGLDGVIA------IACGVNHSMALRND 393
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++ +G + +G+LG V++ T +P I +I CG S A+ +G ++ WG
Sbjct: 394 GTVWTWGFNAFGQLG---DGTKVSKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWG 450
Query: 370 MGNGYQLGNG------------------------KEDDILNSEGKIYAFGRHDYGRLGLK 405
QLGNG L +G ++A+G ++YG LG K
Sbjct: 451 DNQYGQLGNGTFISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELG-K 509
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ V PT ++ D SI +C A+ ++G ++ WG QLG+G
Sbjct: 510 GFTTRVIYPTETLNIGDIKAISIGSSHC--LALKNDGTVWAWGDNRYGQLGDGTTTIKSL 567
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+++ G + +++GG HS+ L
Sbjct: 568 PVQVSGIS----GITAISAGGSHSLAL 590
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 203/447 (45%), Gaps = 60/447 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + T + V +L + + G + L DG V+ WG N
Sbjct: 444 GTVWAWGDNQYGQLGNGT-FISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNN 502
Query: 97 DEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
+ G LG+ + +T+N+ KA+ I G SH +AL DGTV+AWG R +G +G
Sbjct: 503 EYGELGKGFTTRVIYPTETLNIGDIKAISI--GSSHCLALKNDGTVWAWGDNR--YGQLG 558
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
I+ P+++ +SGI I++G H + L S G + G GQLG T+ RN
Sbjct: 559 DGTTTIKSLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED--RN 616
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
+S L I + +Y +F + + G++ +G ++Y+ E
Sbjct: 617 TPVQVSELS---------GITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEK------- 660
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P I LS + G +H+LAL ++G ++A+G++++G+ G + T
Sbjct: 661 ----MTMPIQISGLS--GIIAIECGTYHNLALKNDGTVWAWGKNNFGQFG-----DGTTT 709
Query: 335 PTPIPSLQD--KTITSIACGNCVSFAIDSEGVLYGWG-------------MGNGYQLGNG 379
T IP + +IA G S A+ S+G ++ WG Q+
Sbjct: 710 TTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGL 769
Query: 380 KE------DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
E + L ++GK++ +G +DYG+LG + VT P+ L+ + +A +
Sbjct: 770 SEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVA-PVSGLEG--VAGVASSDT 826
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKE 460
S + ++G + WG N QLGNG+
Sbjct: 827 TSMVLMNDGTIRAWGKNNFGQLGNGER 853
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 208/498 (41%), Gaps = 116/498 (23%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R T V LD V+ + G H++ L DG V+TWG N
Sbjct: 344 GTVWVWGDNTSGQLGDGT-TTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFN 402
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D + + +P + I+ G SHS+AL +DGTV+AWG + +G
Sbjct: 403 AFGQLG-----DGTKVSKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGD--NQYG 455
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRS 211
+G TP ++ ++SGI I G L G + G E G+LG+ T R
Sbjct: 456 QLGNGTFISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTR- 514
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
+ P E L I + G + + + G++ A+G N Y QLG+ +
Sbjct: 515 ----------VIYPTET-LNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTT 563
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
++ P + +S T +++G HSLAL S+G ++A+G+++ G+LG E
Sbjct: 564 IKS-------LPVQVSGIS--GITAISAGGSHSLALKSDGTVWAWGQNNVGQLG-DGTKE 613
Query: 331 PVTEPTPIPSLQDKTITSIACGNCV--SFAIDSEGVLYGWGMGNGYQLGNGK-------- 380
P + L T+ S NC+ SFA+ ++G ++ WG + Y L K
Sbjct: 614 DRNTPVQVSELSGITVIS----NCIYRSFALKNDGTVWVWG-SDSYNLPLEKMTMPIQIS 668
Query: 381 -------------EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTI 425
+ L ++G ++A+G++++G+ G + T T IP +
Sbjct: 669 GLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFG-----DGTTTTTNIPVQVSGLSGV 723
Query: 426 TSIACGNCVSFAIDSEGV------------------------------------------ 443
+IA G S A+ S+G
Sbjct: 724 KAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKN 783
Query: 444 ---LYGWGMGNGYQLGNG 458
++ WG + QLG+G
Sbjct: 784 DGKVFTWGANDYGQLGDG 801
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G D GQLG G R T A V L+ V V ++ L DG + WG N
Sbjct: 785 GKVFTWGANDYGQLGDGT-TTARVTVAPVSGLEGVAGVASSDTTSMVLMNDGTIRAWGKN 843
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
+ G LG G ++ + A+ ISA
Sbjct: 844 NFGQLGNGERGFYDYAEYSFGSTNGAIPISA 874
>gi|326479840|gb|EGE03850.1| ran exchange factor Prp20/Pim1 [Trichophyton equinum CBS 127.97]
Length = 487
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 198/438 (45%), Gaps = 73/438 (16%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLD 69
++ P + S +P K V G G + +LGLGP + ++ K L +LD
Sbjct: 24 QKTRAPKKTESSISNTIPKQKLN-----VYVFGSGSSAELGLGPKNAIDVKRPRLNTNLD 78
Query: 70 ----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD----------------- 108
VV++ GGMH LT + + TWG ND ALGRE D
Sbjct: 79 AEKVGVVDIGAGGMHAAALTHNNHILTWGVNDNCALGRETTWDGGLKDMADDDESVASDE 138
Query: 109 -----SEFIPQTVNLPK-----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LK 157
E IP + K K Q++AGDS + AL EDG VY WGSF + G G
Sbjct: 139 VELNPREAIPTAIPREKFPEGTKFCQVAAGDSATFALTEDGLVYGWGSFVTTEGERGWWN 198
Query: 158 GEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ------ 209
GE I Q P+ + + IV+I++G + + L +G + + G PEQ QLGR +
Sbjct: 199 GEHIKMQSNPVMIPGLEKIVQISAGNNFCLALDHKGRVFSWGRPEQDQLGRHIKVDRRKT 258
Query: 210 ---RSASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
++AS + R L PG V L K K I + G ++F I S G +GLNN+ Q
Sbjct: 259 AGNKNASIDKLRNDIGLVPGLVALPKSKRIISIHAGSDHSFAIDSNGDTWTWGLNNFGQT 318
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
A + G + P L +K M+ G+HHS+ + +G+ +GR D ++G
Sbjct: 319 --AVNVGAGKGGSTIVRPQKATMLIGQKMKMIQGGRHHSIGITKDGQCLVWGRMDGAQMG 376
Query: 325 LK----NVSEP------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+ ++ +P + EPTP+P T A G+ + I SEG Y W
Sbjct: 377 IDYSTLHLDDPQVVISERGKPRILLEPTPLPI---PNCTFAAAGSDHNVLITSEGKAYTW 433
Query: 369 GMGNGYQLGNGKE-DDIL 385
G+ YQ G G + DDIL
Sbjct: 434 GINATYQCGQGPDTDDIL 451
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGE-----------ADSEVQKSGNTCFFTPHLI---- 285
G++ ++ IL +G+N+ LG AD + + + P
Sbjct: 91 GMHAAALTHNNHILTWGVNDNCALGRETTWDGGLKDMADDDESVASDEVELNPREAIPTA 150
Query: 286 ----KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH--DYGRLGLKNVSEPVTEPTP-- 337
K KF +A+G + AL +G +Y +G G G N + P
Sbjct: 151 IPREKFPEGTKFCQVAAGDSATFALTEDGLVYGWGSFVTTEGERGWWNGEHIKMQSNPVM 210
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRH 397
IP L+ I I+ GN A+D +G ++ WG QLG + D + G A
Sbjct: 211 IPGLE--KIVQISAGNNFCLALDHKGRVFSWGRPEQDQLGRHIKVDRRKTAGNKNASIDK 268
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GY 453
+GL P + + K I SI G+ SFAIDS G + WG+ N
Sbjct: 269 LRNDIGLV--------PGLVALPKSKRIISIHAGSDHSFAIDSNGDTWTWGLNNFGQTAV 320
Query: 454 QLGNGK-EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G GK I+ P K L + + G HS+ + K
Sbjct: 321 NVGAGKGGSTIVRPQK--ATMLIGQKMKMIQGGRHHSIGITK 360
>gi|326471153|gb|EGD95162.1| ran exchange factor Prp20/Pim1 [Trichophyton tonsurans CBS 112818]
Length = 487
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 199/438 (45%), Gaps = 73/438 (16%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLD 69
++ P + S +P K V G G + +LGLGP + ++ K L +LD
Sbjct: 24 QKTRAPKKTESSISNTIPKQKLN-----VYVFGSGSSAELGLGPKNAIDVKRPRLNTNLD 78
Query: 70 ----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD----------------- 108
VV++ GGMH LT + + TWG ND ALGRE D
Sbjct: 79 AEKVGVVDIGAGGMHAAALTHNNHILTWGVNDNCALGRETTWDGGLKDMADDDESVASDE 138
Query: 109 -----SEFIPQTVNLPK-----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LK 157
E IP + K K Q++AGDS + AL EDG VY WGSF + G G
Sbjct: 139 VELNPREAIPTAIPREKFPEGTKFCQVAAGDSATFALTEDGLVYGWGSFVTTEGERGWWN 198
Query: 158 GEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ------ 209
GE I Q P+ + + IV+I++G + + L +G + + G PEQ QLGR +
Sbjct: 199 GEHIKMQSNPVMIPGLEKIVQISAGNNFCLALDHKGRVFSWGRPEQDQLGRHIRVDRRKT 258
Query: 210 ---RSASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
++AS + R L PG V L K K I + G ++F I S G +GLNN+ Q
Sbjct: 259 AGNKNASIDKLRNDIGLVPGLVALPKSKRIISIHAGSDHSFAIDSNGDTWTWGLNNFGQT 318
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+ K G+T P L +K M+ G+HHS+ + +G+ +GR D ++G
Sbjct: 319 A-VNVGAGKGGST-IVRPQKATMLIGQKMKMIQGGRHHSIGITKDGQCLVWGRMDGAQMG 376
Query: 325 LK----NVSEP------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+ ++ +P + EPTP+P T A G+ + I SEG Y W
Sbjct: 377 IDYSTLHLDDPQVVISERGKPRILLEPTPLPI---PNCTFAAAGSDHNVLITSEGKAYTW 433
Query: 369 GMGNGYQLGNGKE-DDIL 385
G+ YQ G G + DDIL
Sbjct: 434 GINATYQCGQGPDTDDIL 451
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 107/282 (37%), Gaps = 40/282 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGE-----------ADSEVQKSGNTCFFTPHLI---- 285
G++ ++ IL +G+N+ LG AD + + + P
Sbjct: 91 GMHAAALTHNNHILTWGVNDNCALGRETTWDGGLKDMADDDESVASDEVELNPREAIPTA 150
Query: 286 ----KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH--DYGRLGLKNVSEPVTEPTP-- 337
K KF +A+G + AL +G +Y +G G G N + P
Sbjct: 151 IPREKFPEGTKFCQVAAGDSATFALTEDGLVYGWGSFVTTEGERGWWNGEHIKMQSNPVM 210
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRH 397
IP L+ I I+ GN A+D +G ++ WG QLG D + G A
Sbjct: 211 IPGLE--KIVQISAGNNFCLALDHKGRVFSWGRPEQDQLGRHIRVDRRKTAGNKNASIDK 268
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GY 453
+GL P + + K I SI G+ SFAIDS G + WG+ N
Sbjct: 269 LRNDIGLV--------PGLVALPKSKRIISIHAGSDHSFAIDSNGDTWTWGLNNFGQTAV 320
Query: 454 QLGNGK-EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G GK I+ P K L + + G HS+ + K
Sbjct: 321 NVGAGKGGSTIVRPQK--ATMLIGQKMKMIQGGRHHSIGITK 360
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 228/482 (47%), Gaps = 61/482 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G R + V L +VV + G H + L DG V+ WG N
Sbjct: 15 GTVWAWGSNSSGQLGDG-TTTPRGSPVQVPGLTDVVALSAGNHHCLALRTDGTVWAWGSN 73
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG +G + +V +P V +SAG S+++AL DGTV+AWG + +G +
Sbjct: 74 SSGQLG---DGTTTPRLSSVQVPGLTDVVALSAGSSYTLALRTDGTVWAWG--YNFYGQL 128
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G + P+++ ++ +V ++SG H + L + G + G GQLG T
Sbjct: 129 GDGTTTPRLAPVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTA----- 183
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
RR L P +VP + G ++ + + G++ A+G N QLG+ +
Sbjct: 184 -TRR----LSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTA----- 233
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T +P + L++ L++ ++LAL ++G ++A+G + YG+LG + P
Sbjct: 234 --TPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLG-DGTTTPRLS 288
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--------------- 379
P +P L + + +++ G S A+ ++G ++ WG QLGNG
Sbjct: 289 PVQVPGLTN--VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGLI 346
Query: 380 ---------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L ++G ++A+G + G+LG + P P +P L D + +++
Sbjct: 347 DVVALSAGYSHSLALRTDGTVWAWGYNSLGQLG-DGTTIPRPSPVQVPDLTD--VVALSA 403
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ ++G + WG+ QLG+G L P+++ L + V+ +++GG H++
Sbjct: 404 GDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQV--PDLTD--VVALSAGGNHTL 459
Query: 491 IL 492
L
Sbjct: 460 AL 461
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 228/482 (47%), Gaps = 61/482 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G R + V L +VV + GG H++ + DG V+ WG N
Sbjct: 165 GTVWAWGDNASGQLGDG-TATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSN 223
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + P V+ V +SA DS+++AL DGTV+AWG +S+G +G
Sbjct: 224 FSGQLG-DGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWG--YNSYGQLGD 280
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASR 214
+ +P+++ ++ +V +++G H + L + G + G GQLG TQRS S
Sbjct: 281 GTTTPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSI 340
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
++ + H + + + G++ A+G N+ QLG+ + + S
Sbjct: 341 PV---FGLIDVVALSAGYSH---------SLALRTDGTVWAWGYNSLGQLGDGTTIPRPS 388
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P + L+D L++G HSLAL ++G + A+G + G+LG + +
Sbjct: 389 -------PVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRL-S 438
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL--------- 385
P +P L D + +++ G + A+ + G ++ WG + QLG+G L
Sbjct: 439 PVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLGLT 496
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+++G ++A+G + G+LG + +T P +P L D + +++
Sbjct: 497 NVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLT-PVQVPGLTD--VVALSA 553
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ ++G ++ WG + QLG+G P+++ G V+ +++GG HS+
Sbjct: 554 GDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLT----DVVALSAGGAHSL 609
Query: 491 IL 492
L
Sbjct: 610 AL 611
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 223/490 (45%), Gaps = 62/490 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
TL +T G V G GQLG G R V L +VV + G H++ L DG
Sbjct: 108 TLALRTDG-TVWAWGYNFYGQLGDG-TTTPRLAPVQVPGLTDVVALSSGIYHSLALRTDG 165
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V+ WG N G LG + P V V +SAG HS+A+ DGTV+AWGS
Sbjct: 166 TVWAWGDNASGQLG-DGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGS-- 222
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+ G +G + +P+++ ++ +V +++ + + L + G + G GQLG T
Sbjct: 223 NFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGT 282
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
L P +VP + ++ + + G++ A+G N QLG
Sbjct: 283 T----------TPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG- 331
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
Q+S + F LI ++ L++G HSLAL ++G ++A+G + G+LG
Sbjct: 332 IPTQRSPSIPVF--GLIDVVA------LSAGYSHSLALRTDGTVWAWGYNSLGQLG-DGT 382
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED------ 382
+ P P +P L D + +++ G+ S A+ ++G + WG+ QLG+G
Sbjct: 383 TIPRPSPVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440
Query: 383 ------DI------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEP--TPIPSLQD 422
D+ L + G ++A+G + G+LG + T P +P+ L
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLG-----DGTTTPRLSPVQMLGL 495
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
+ +++ G S A+ ++G ++ WG + QLG+G L P+++ G V+ +
Sbjct: 496 TNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLT----DVVAL 551
Query: 483 ASGGQHSVIL 492
++G HS+ L
Sbjct: 552 SAGDSHSLAL 561
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 201/436 (46%), Gaps = 61/436 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +R V L +VV + G H++ L DG V+ WG N
Sbjct: 315 GTVWAWGYNYNGQLGNGIPT-QRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYN 373
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG +G + P V +P V +SAGDSHS+AL DGTV AWG + G +
Sbjct: 374 SLGQLG---DGTTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWG--VNYSGQL 428
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G + +P+++ ++ +V +++G +H + L + G + G GQLG T
Sbjct: 429 GDGTTTHRLSPVQVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT----- 483
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
L P ++ L ++ + G Y++ + + G++ A+G N+ QLG+ +
Sbjct: 484 -----TPRLSPVQM-LGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTT---- 533
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
T TP + L+D L++G HSLAL ++G ++A+G + +LG + P
Sbjct: 534 ---THRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQLG-DGTTTPRG 587
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P +P L D + +++ G S A+ ++G ++A
Sbjct: 588 SPVQVPGLTD--VVALSAGGAHSLALRTDG--------------------------TVWA 619
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + YG+LG + P P + +L +++ G S A+ ++G WG G
Sbjct: 620 WGSNYYGQLG-DGTTTPRLFPVLVSNLTGT--SNLYAGAGHSLALRTDGTGRAWGNNYGG 676
Query: 454 QLGNGKEDDILEPMKI 469
QLG+G L P+++
Sbjct: 677 QLGDGTSAFFLHPVQV 692
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 184/392 (46%), Gaps = 55/392 (14%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
++AG SHS+AL DGTV+AWGS +S G +G + +P+++ ++ +V +++G H
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGS--NSSGQLGDGTTTPRGSPVQVPGLTDVVALSAGNHHC 58
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + G + G GQLG T L +VP + Y
Sbjct: 59 LALRTDGTVWAWGSNSSGQLGDGTT----------TPRLSSVQVPGLTDVVALSAGSSYT 108
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ + G++ A+G N Y QLG+ + T P + L+D L+SG +HSL
Sbjct: 109 LALRTDGTVWAWGYNFYGQLGDGTT-------TPRLAPVQVPGLTD--VVALSSGIYHSL 159
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL ++G ++A+G + G+LG + + P +P L D + +++ G S A+ ++G
Sbjct: 160 ALRTDGTVWAWGDNASGQLGDGTATRRL-SPVQVPGLTD--VVALSAGGYHSLAVRTDGT 216
Query: 365 LYGWGMGNGYQLGNG--------------------KEDD----ILNSEGKIYAFGRHDYG 400
++ WG QLG+G DD L ++G ++A+G + YG
Sbjct: 217 VWAWGSNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYG 276
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+LG + P P +P L + + +++ G S A+ ++G ++ WG QLGNG
Sbjct: 277 QLG-DGTTTPRLSPVQVPGLTN--VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIP 333
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ + G V+ +++G HS+ L
Sbjct: 334 TQRSPSIPVFGL----IDVVALSAGYSHSLAL 361
>gi|255719666|ref|XP_002556113.1| KLTH0H05390p [Lachancea thermotolerans]
gi|238942079|emb|CAR30251.1| KLTH0H05390p [Lachancea thermotolerans CBS 6340]
Length = 481
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 191/414 (46%), Gaps = 67/414 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D +V VGGMH + L +D V++
Sbjct: 49 IFCWGTGSMCELGLGPSAKNKEVKRPRLNPYLPRDQAKIVSFAVGGMHVLALDQDNHVWS 108
Query: 93 WGCNDEGALGREAE----------------------GDSEFIPQTVNLP--------KKA 122
WG ND GALGR+ D E P + LP K
Sbjct: 109 WGTNDSGALGRDTSHANEQLKDMDADDSSDDEDGDLNDQESTP--IKLPDESLPLKDHKV 166
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLES--VSGIVKIA 178
VQ++A D+ S LL++G VYAWG+FR + G +G + IQ TP K+ S S +V++A
Sbjct: 167 VQLAATDNLSCVLLDNGEVYAWGTFRCNEGILGFYKDTIKIQNTPWKVPSFTTSKVVQMA 226
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+G DH + L G + G +Q QLGR I +RS R L+P L + +
Sbjct: 227 AGKDHILFLDEGGVVYAWGNGQQYQLGRKIMERSRLRT-------LDPRAFGLDK--VKY 277
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ TG ++F ++ G + ++GLN + Q G ++ EV T L+ + + M+
Sbjct: 278 IATGENHSFALTRDGRLYSWGLNQFGQCGVSE-EVDDGALVTVPTEVLLPEGT--RVKMV 334
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-----------EPVTEPTPIPSLQDKT 345
++G+HHS+ L EG++Y FGR D +G+ +P P P ++
Sbjct: 335 SAGEHHSMVLTEEGELYTFGRLDMFEIGIPKAKLPEQTYIDAHGKPRAVPVPTKLVEVPR 394
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+IA G+ S AI +GV++ WG G Y +G G D + +I D+
Sbjct: 395 FKNIAAGSHHSLAISEDGVVFSWGFGETYAVGLGPSGDDIEVPTRIKNTATQDH 448
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 151/385 (39%), Gaps = 78/385 (20%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR-----------------NA 216
IV A G H + L ++ + G + G LGR T + + N
Sbjct: 87 IVSFAVGGMHVLALDQDNHVWSWGTNDSGALGRDTSHANEQLKDMDADDSSDDEDGDLND 146
Query: 217 RRGMSFLEPGE-VPLK-RKHIDDVFTGVYNTFISSKGSILAFGLN--NYSQLGEADSEVQ 272
+ P E +PLK K + T + + G + A+G N LG ++
Sbjct: 147 QESTPIKLPDESLPLKDHKVVQLAATDNLSCVLLDNGEVYAWGTFRCNEGILGFYKDTIK 206
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
TP + S + K +A+G+ H L L+ G +YA+G +LG K +
Sbjct: 207 IQN-----TPWKVPSFTTSKVVQMAAGKDHILFLDEGGVVYAWGNGQQYQLGRK-----I 256
Query: 333 TEPTPIPSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---- 383
E + + +L + + IA G SFA+ +G LY WG+ Q G +E D
Sbjct: 257 MERSRLRTLDPRAFGLDKVKYIATGENHSFALTRDGRLYSWGLNQFGQCGVSEEVDDGAL 316
Query: 384 --------------------------ILNSEGKIYAFGRHDYGRLGLKNVS--------- 408
+L EG++Y FGR D +G+
Sbjct: 317 VTVPTEVLLPEGTRVKMVSAGEHHSMVLTEEGELYTFGRLDMFEIGIPKAKLPEQTYIDA 376
Query: 409 --EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+P P P ++ +IA G+ S AI +GV++ WG G Y +G G DDI
Sbjct: 377 HGKPRAVPVPTKLVEVPRFKNIAAGSHHSLAISEDGVVFSWGFGETYAVGLGPSGDDIEV 436
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSV 490
P +I+ ++ ++ V GGQ SV
Sbjct: 437 PTRIKNTATQDHDIIFVGGGGQFSV 461
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 53/255 (20%)
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGL-KNVSEPVTEPTPIPSLQDK 344
L D K LA+ + S L G++YA+G R + G LG K+ + P +PS
Sbjct: 161 LKDHKVVQLAATDNLSCVLLDNGEVYAWGTFRCNEGILGFYKDTIKIQNTPWKVPSFTTS 220
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------------------- 378
+ +A G +D GV+Y WG G YQLG
Sbjct: 221 KVVQMAAGKDHILFLDEGGVVYAWGNGQQYQLGRKIMERSRLRTLDPRAFGLDKVKYIAT 280
Query: 379 GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEP---VTEPTPIPSLQDKTITSIACGNCV 434
G+ L +G++Y++G + +G+ G+ + VT PT + + + ++ G
Sbjct: 281 GENHSFALTRDGRLYSWGLNQFGQCGVSEEVDDGALVTVPTEVLLPEGTRVKMVSAGEHH 340
Query: 435 SFAIDSEGVLYGWGMGNGYQLG--------------NGKEDDILEPMK-IEGKQLNNYTV 479
S + EG LY +G + +++G +GK + P K +E + N
Sbjct: 341 SMVLTEEGELYTFGRLDMFEIGIPKAKLPEQTYIDAHGKPRAVPVPTKLVEVPRFKN--- 397
Query: 480 LQVASGGQHSVILAK 494
+A+G HS+ +++
Sbjct: 398 --IAAGSHHSLAISE 410
>gi|453083534|gb|EMF11580.1| RCC1/BLIP-II protein [Mycosphaerella populorum SO2202]
Length = 599
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 195/448 (43%), Gaps = 79/448 (17%)
Query: 2 THLLKKVLRKQAENPSQKVFVTSEA-----VPTLKCKTGGGVVLTCGQGDTGQLGLGP-- 54
T +K + P++KV + ++ PT K V G+G G+LGLG
Sbjct: 125 TSRKRKTADETTAAPAKKVKLLTKGPVLNEAPTQKLN-----VYVFGEGTAGELGLGTAK 179
Query: 55 ---DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-- 108
DV R L VV++ GGMH + LT D K+ TWG ND+G LGR+ D
Sbjct: 180 KSVDVKRPRLNPELSAGKVGVVQIEAGGMHVIALTHDNKILTWGVNDQGTLGRDTTWDGG 239
Query: 109 -----------------------SEFIPQTVNLPK-------KAVQISAGDSHSVALLED 138
E +P V+ + + V+++AGDS S L +D
Sbjct: 240 LKEMDAAGSDSESDSGDDNGLNPKEALPAEVDWSQTEVAEGTRFVEVAAGDSTSFVLTDD 299
Query: 139 GTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
G VY WG+FR + G G E + P+ + + I I +GA+H + L S+G + G
Sbjct: 300 GKVYGWGTFRSNDGIFGFTQEVKVATRPVLVPGLKNIKSIKAGANHALALDSKGAVFAWG 359
Query: 198 CPEQGQLG-RITQRSASRNARRGMSFLEPGEVPL---KRKHIDDVFTGVYNTF-ISSKGS 252
+Q QLG RI +R+ S L P E L +K I + TG Y++F IS G
Sbjct: 360 SGQQNQLGRRIVERTKSE-------ALFPREFGLPKGAKKVITSIQTGAYHSFAISKNGD 412
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I A+GLNN+ + G D+ Q + P ++ +L KK + G HHS+A EG
Sbjct: 413 IYAWGLNNFGETGIMDNAGQD--DAVIMNPKVVTALKGKKIITIKGGGHHSIAATEEGDC 470
Query: 313 YAFGRHDYGRLGL-----------KNVSEPVTEPTPIPSLQ-----DKTITSIACGNCVS 356
+GR D + G+ + + P + Q D ++ + + +
Sbjct: 471 LVWGRIDGAQTGISAEDIAKLPEGSTIKDEAGRPRILAVPQKVNAIDGPVSHVTASSDHN 530
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
I +G + WG YQ G G +DD+
Sbjct: 531 IVITQQGKAWSWGFSANYQTGQGTDDDV 558
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 167/411 (40%), Gaps = 63/411 (15%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSF------RDSHGSMGLK---------------GEGI 161
VQI AG H +AL D + WG RD+ GLK G+
Sbjct: 201 VQIEAGGMHVIALTHDNKILTWGVNDQGTLGRDTTWDGGLKEMDAAGSDSESDSGDDNGL 260
Query: 162 ---QKTPLKL-----ESVSG--IVKIASGADHFVMLTSRGNLLTAGC--PEQGQLGRITQ 209
+ P ++ E G V++A+G +LT G + G G G TQ
Sbjct: 261 NPKEALPAEVDWSQTEVAEGTRFVEVAAGDSTSFVLTDDGKVYGWGTFRSNDGIFG-FTQ 319
Query: 210 --RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ A+R L PG K+I + G + + SKG++ A+G +QLG
Sbjct: 320 EVKVATR------PVLVPG-----LKNIKSIKAGANHALALDSKGAVFAWGSGQQNQLGR 368
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
E KS F + + K T + +G +HS A++ G IYA+G +++G G+
Sbjct: 369 RIVERTKS-EALFPREFGLPKGAKKVITSIQTGAYHSFAISKNGDIYAWGLNNFGETGIM 427
Query: 327 NVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ + + P + +L+ K I +I G S A EG WG +G Q G ED
Sbjct: 428 DNAGQDDAVIMNPKVVTALKGKKIITIKGGGHHSIAATEEGDCLVWGRIDGAQTGISAED 487
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
EG + + GR + V + V + D ++ + + + I +G
Sbjct: 488 IAKLPEGSTI---KDEAGRPRILAVPQKV-------NAIDGPVSHVTASSDHNIVITQQG 537
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ WG YQ G G +DD+ I+ + + + SGGQ S+I A
Sbjct: 538 KAWSWGFSANYQTGQGTDDDVTVATLIDNTAVRDTKLNGATSGGQFSIITA 588
>gi|242820402|ref|XP_002487503.1| Ran exchange factor Prp20/Pim1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713968|gb|EED13392.1| Ran exchange factor Prp20/Pim1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 559
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 187/396 (47%), Gaps = 61/396 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVME----RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
V G +LG+G + R F V VV++ GGMH + LT D KV TWG
Sbjct: 135 VFAFGSNSNAELGMGDTFKKADCPRPKFNSVLSEAGVVQISTGGMHGIALTHDNKVLTWG 194
Query: 95 CNDEGALGREAEGD------------------------SEFIPQTVNLP-----KKAVQI 125
ND+GALGR+ + + E P ++L Q+
Sbjct: 195 VNDQGALGRDTDWEGGLVDMDKAEESDSDEDEEIEVNPKEATPSVIDLSGVEEGTVFTQV 254
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHF 184
A DS S AL +DG VY WG+FR+S+G E +Q+TP ++ + + K+A+G++H
Sbjct: 255 VAADSASFALTDDGYVYGWGTFRNSNGVWAFSPEVVVQRTPTRIPGLKNVAKLAAGSNHV 314
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + G + + G EQ QL R R R A+ L P +V KR I D+ +G Y+
Sbjct: 315 LALLTDGTVHSWGSGEQDQLAR---RLMERRAKE--QGLVPQKVGSKRGFI-DIASGAYH 368
Query: 245 TFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS-DKKFTMLASGQHH 302
+F K GS+ +GLNNY+Q G A S+ +SG P ++ SL K T +A+G +
Sbjct: 369 SFALHKDGSVYGWGLNNYAQTGIA-SKAGESG-AGVLKPTVVPSLKGQNKITQIAAGNFN 426
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDKTITS 348
+LAL + + +GR D +G+ + P +T T IP L+ ++
Sbjct: 427 TLALTDKNECLVWGRIDNHAIGIDPSTLPKEDVIFDDRDRPRILTNATRIPDLE---VSY 483
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
G + AI ++G Y WG + Q G +DDI
Sbjct: 484 ATYGTEHAIAITTDGKAYSWGFNSSNQTGQPGDDDI 519
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 113/288 (39%), Gaps = 72/288 (25%)
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
V NT +++ + AFG N+ ++LG D+ + C P LS+ +++G
Sbjct: 124 VINTAPTTRLDVFAFGSNSNAELGMGDTFKKAD---CP-RPKFNSVLSEAGVVQISTGGM 179
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSE--------------------PVTEPTPIPSL 341
H +AL + K+ +G +D G LG E V PS+
Sbjct: 180 HGIALTHDNKVLTWGVNDQGALGRDTDWEGGLVDMDKAEESDSDEDEEIEVNPKEATPSV 239
Query: 342 QD-------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
D T + + SFA+ +G +YGWG NS G ++AF
Sbjct: 240 IDLSGVEEGTVFTQVVAADSASFALTDDGYVYGWGT-------------FRNSNG-VWAF 285
Query: 395 GRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
E V + TP IP L K + +A G+ A+ ++G ++ WG G
Sbjct: 286 S------------PEVVVQRTPTRIPGL--KNVAKLAAGSNHVLALLTDGTVHSWGSGEQ 331
Query: 453 YQLG------NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QL KE ++ P K+ K+ + +ASG HS L K
Sbjct: 332 DQLARRLMERRAKEQGLV-PQKVGSKR----GFIDIASGAYHSFALHK 374
>gi|308802331|ref|XP_003078479.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116056931|emb|CAL53220.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 530
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 187/390 (47%), Gaps = 52/390 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED--LDNV--VEVVVGGMHTVCLTEDGKVYT 92
G V G GD+GQLG+G DV E++ A VE ++NV + V GG HT+ LT G ++
Sbjct: 103 GTVFAWGNGDSGQLGMGGDVDEKRRPASVEYGVMENVKVLSVACGGTHTIALTSGGTCFS 162
Query: 93 WGCNDEGALGREAEGD----SEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGS 146
WG ND GALGR + D +E+ P V LP K + IS GDSH +AL E+G+VYAWG+
Sbjct: 163 WGNNDGGALGRRVDKDKNPEAEYEPGKVELPLDVKVLAISTGDSHGLALAENGSVYAWGA 222
Query: 147 FRDSHGSMGLKGEGI--QKTPLKLESVS------GIVKIASGADHFVMLTSRGNLLTAGC 198
FR ++G + + +KT + + + IASG DH + LT G + + G
Sbjct: 223 FRTANGEWAFNPKTLDAKKTMFPFQIYTPKTQKERVKAIASGVDHALALTQEGGVYSWGS 282
Query: 199 PEQGQLGRITQRSASRNARRG----MSFLEPGEVPLKRKH-------------IDDVFTG 241
E+G+LGR + A N G L PG V + + G
Sbjct: 283 SEKGRLGRFAESEAENNEEAGDELKRRLLTPGRVSFPTSGGAAIGSAFGGEPVMTAIVAG 342
Query: 242 VYNTFI------SSKGSILAFGLNNYSQLGEADSEVQKSGN-TCFFTPHLIKSLSDKKFT 294
+++F SK ++ +GL+N +QLG D+ G+ + P + LS ++
Sbjct: 343 DFHSFAISANEDGSKSTVYGWGLSNCNQLGIFDTNPDLRGDQQVTYFPKRVDCLSGRRIV 402
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+G HHS+ L +GK+ + GR GR +P I L + + I CG
Sbjct: 403 SGDAGTHHSIFLTGDGKVISVGRWTDGR--------SACDPGEIEDLPGR-VVKITCGGT 453
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNG-KEDD 383
AI +G Y WG QLG G +E+D
Sbjct: 454 NGGAILEDGHAYVWGSQYMGQLGLGPREED 483
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 183/493 (37%), Gaps = 155/493 (31%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL----PKKAVQISAGDSHSVALL 136
TV G V+ WG D G LG + D + P +V K + ++ G +H++AL
Sbjct: 96 TVRERASGTVFAWGNGDSGQLGMGGDVDEKRRPASVEYGVMENVKVLSVACGGTHTIALT 155
Query: 137 EDGTVYAWGSFRDSHGSMGLKGE-----------GIQKTPLKLESVSGIVKIASGADHFV 185
GT ++WG+ + G++G + + G + PL ++ ++ I++G H +
Sbjct: 156 SGGTCFSWGN--NDGGALGRRVDKDKNPEAEYEPGKVELPLDVK----VLAISTGDSHGL 209
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
L G++ G A R A GE K +D
Sbjct: 210 ALAENGSVYAWG--------------AFRTAN--------GEWAFNPKTLD--------- 238
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+K ++ F + +TP K ++ +ASG H+LA
Sbjct: 239 ---AKKTMFPFQI---------------------YTPKTQK----ERVKAIASGVDHALA 270
Query: 306 LNSEGKIYAFGRHDYGRLG----------------LK-------NVSEPVTEPTPIPSL- 341
L EG +Y++G + GRLG LK VS P + I S
Sbjct: 271 LTQEGGVYSWGSSEKGRLGRFAESEAENNEEAGDELKRRLLTPGRVSFPTSGGAAIGSAF 330
Query: 342 -QDKTITSIACGNCVSFAID-----SEGVLYGWGMGNGYQLG------------------ 377
+ +T+I G+ SFAI S+ +YGWG+ N QLG
Sbjct: 331 GGEPVMTAIVAGDFHSFAISANEDGSKSTVYGWGLSNCNQLGIFDTNPDLRGDQQVTYFP 390
Query: 378 ---------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G I L +GK+ + GR GR +P I L
Sbjct: 391 KRVDCLSGRRIVSGDAGTHHSIFLTGDGKVISVGRWTDGR--------SACDPGEIEDLP 442
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIE-GKQLNNYTV 479
+ + I CG AI +G Y WG QLG G +E+D P K++ K +
Sbjct: 443 GR-VVKITCGGTNGGAILEDGHAYVWGSQYMGQLGLGPREEDAHLPEKLQYTKPMAGKVF 501
Query: 480 LQVASGGQHSVIL 492
++ GGQH+ +
Sbjct: 502 SEIGFGGQHAAAV 514
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS--LQDKTITSIACGNCVSFAIDSEGV 443
+ G ++A+G D G+LG+ + P + +++ + S+ACG + A+ S G
Sbjct: 100 RASGTVFAWGNGDSGQLGMGGDVDEKRRPASVEYGVMENVKVLSVACGGTHTIALTSGGT 159
Query: 444 LYGWGMGNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ WG +G LG + D EP K+E + VL +++G H + LA+
Sbjct: 160 CFSWGNNDGGALGRRVDKDKNPEAEYEPGKVE--LPLDVKVLAISTGDSHGLALAE 213
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVYT 92
TG G V++ G+ G+ P +EDL VV++ GG + + EDG Y
Sbjct: 415 TGDGKVISVGRWTDGRSACDP--------GEIEDLPGRVVKITCGGTNGGAILEDGHAYV 466
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAV-----QISAGDSHSVALLEDGTVYAWGSF 147
WG G LG + +P+ + K +I G H+ A+L D T GS
Sbjct: 467 WGSQYMGQLGLGPREEDAHLPEKLQYTKPMAGKVFSEIGFGGQHAAAVLVDETEAGRGSK 526
Query: 148 R 148
R
Sbjct: 527 R 527
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 221/478 (46%), Gaps = 65/478 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ D GQLG G + R V+ L V V +G H++ L DG V+ WG N
Sbjct: 113 GTVWAWGRNDDGQLGDGT-LSTRGDPVQVQGLSGVTTVALGATHSLALCYDGSVWAWGAN 171
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG + + PQ V ++ V ++AG +HS+A+L DGTV+AWG D G +G
Sbjct: 172 DHGQLG-DGTSIARRTPQMVAGLQEVVAVAAGANHSLAVLSDGTVWAWGENYD--GQLGD 228
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
++ P+ ++ +SGIV +ASG H + L GN+ G GQLG + S S
Sbjct: 229 GTTVTRRVPVPIQGLSGIVAVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSSLSRSS-- 286
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
P++ + + + Y+ + G++ +G+N Y QLG+ + +
Sbjct: 287 ------------PVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDG-TTIA 333
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+S P LS +A+G+ H+LA+ + I+A+G + G+ G ++ S
Sbjct: 334 RS------VPVQTSGLS--GVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYF 385
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
+ T + + ++A N S A+ S+G L+ WG N QLG+G +
Sbjct: 386 SPRTIL-----NEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLG 440
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ +G ++A+G + G+LG T P +P + I S+A
Sbjct: 441 NVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLG-DGTGSSRTIPMQVPGISG--IASVAA 497
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
G+ S A+ + L+ WG + QLG+G + P +++G ++ +A+G H
Sbjct: 498 GSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQGLS----GIVAIATGNGH 551
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 219/507 (43%), Gaps = 103/507 (20%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G D GQLG G + R+T +V L VV V G H++ + DG V+ WG N
Sbjct: 163 GSVWAWGANDHGQLGDGTSI-ARRTPQMVAGLQEVVAVAAGANHSLAVLSDGTVWAWGEN 221
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG D + + V +P + V +++G SHS+AL DG V+AWGS + G
Sbjct: 222 YDGQLG-----DGTTVTRRVPVPIQGLSGIVAVASGTSHSLALRYDGNVWAWGS--NYSG 274
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR------ 206
+G + +P+++ +SGIV + G D+ + + G + T G GQLG
Sbjct: 275 QLGDGSSLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIAR 334
Query: 207 -----------ITQRSASR-------------------NARRG----MSFLEPGEVPLKR 232
+ +A R N +RG + P R
Sbjct: 335 SVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSP------R 388
Query: 233 KHIDDVFTGV----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+++V T ++ + S G + A+G NN QLG+ ++ + + P +
Sbjct: 389 TILNEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNR-------WAPAEVLG- 440
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+A+G+ HSLA+ +G ++A+G + G+LG T P +P + I S
Sbjct: 441 ---NVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLG-DGTGSSRTIPMQVPGISG--IAS 494
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------I 384
+A G+ S A+ + L+ WG + QLG+G +
Sbjct: 495 VAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQGLSGIVAIATGNGHMLA 554
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ S G ++A+G + G+LG + TP+ I ++A G S A+ +G L
Sbjct: 555 VRSNGTVWAWGDNSSGQLGDGTT---INRATPVQVQVLSGIVAVAAGAAHSLAVRYDGTL 611
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ WG+ N QLG+G L P +++G
Sbjct: 612 WAWGINNTSQLGDGTGIPRLVPTQVQG 638
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 173/360 (48%), Gaps = 31/360 (8%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
+L ++ GG+ G + GQLG D + +A E L NVV V G H++ + +DG
Sbjct: 404 SLAVRSDGGL-WAWGANNEGQLG---DGTTKNRWAPAEVLGNVVSVAAGRRHSLAVRDDG 459
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
++ WG N G LG + G S IP V ++AG +SVAL D T++AWG
Sbjct: 460 SLWAWGSNTVGQLG-DGTGSSRTIPMQVPGISGIASVAAGSDYSVALRYDRTLWAWG--E 516
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+S+G +G + P +++ +SGIV IA+G H + + S G + G GQLG T
Sbjct: 517 NSYGQLGDGTTVNRHVPTRVQGLSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGT 576
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
++ P +V + + ++ + G++ A+G+NN SQLG+
Sbjct: 577 T----------INRATPVQVQVLSGIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGT 626
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ P ++ + +++ +HHSLA+ ++G ++ +G ++YG+LG +N
Sbjct: 627 GIPR-------LVPTQVQGIGSA--VAVSAAKHHSLAVLADGTLWDWGANNYGQLG-RNQ 676
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSF----AIDSEGVLYGWGMGNGYQLGNGKEDDI 384
P+ + +L T G + F A+ S+G L GWG QLG G ++I
Sbjct: 677 DNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPENI 736
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 202/461 (43%), Gaps = 63/461 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G + R L VV V G H + + + ++ WG N
Sbjct: 313 GTVWTWGINTYGQLGDGTTI-ARSVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGN 371
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G G E+ F P+T+ + V ++A + HS+A+ DG ++AWG+ + G
Sbjct: 372 VNGQRGDESR-SVYFSPRTI--LNEVVTMAATNDHSLAVRSDGGLWAWGANNE-----GQ 423
Query: 157 KGEGIQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G+G K V G +V +A+G H + + G+L G GQLG T
Sbjct: 424 LGDGTTKNRWAPAEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGT------- 476
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
G S P +VP I V G Y+ + ++ A+G N+Y QLG+ + V +
Sbjct: 477 ---GSSRTIPMQVP-GISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDG-TTVNR- 530
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P ++ LS +A+G H LA+ S G ++A+G + G+LG +
Sbjct: 531 -----HVPTRVQGLS--GIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTT---INR 580
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--------------- 379
TP+ I ++A G S A+ +G L+ WG+ N QLG+G
Sbjct: 581 ATPVQVQVLSGIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIG 640
Query: 380 --------KEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
K + + ++G ++ +G ++YG+LG +N P+ + +L T
Sbjct: 641 SAVAVSAAKHHSLAVLADGTLWDWGANNYGQLG-RNQDNTNPTPSKVTTLTGVTEAVGTF 699
Query: 431 GNCVSF----AIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
G + F A+ S+G L GWG QLG G ++I P+
Sbjct: 700 GYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPENIPVPV 740
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 216/492 (43%), Gaps = 74/492 (15%)
Query: 29 TLKCKT---GGGVVLTCGQGDTGQLGLGPDVMERK-TFALVEDLDNVVEVVVGGMHTVCL 84
T KC T G + ++CGQ + P R+ T + D + M+++ +
Sbjct: 10 TYKCLTLFLGAWLTISCGQPSSQT----PAQAAREFTLQSAQARD---RIAASSMNSLAI 62
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
DG V+T G A G + +P + V I +GD S+A+ DGTV+AW
Sbjct: 63 RSDGTVWTVGTRYVSANGWYRQDWPGQLPGLSGM----VSIDSGDDFSMAVRSDGTVWAW 118
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G R+ G +G + P++++ +SG+ +A GA H + L G++ G + GQL
Sbjct: 119 G--RNDDGQLGDGTLSTRGDPVQVQGLSGVTTVALGATHSLALCYDGSVWAWGANDHGQL 176
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
G T ARR P V ++ + ++ + S G++ A+G N QL
Sbjct: 177 GDGTSI-----ARR-----TPQMVAGLQEVVAVAAGANHSLAVLSDGTVWAWGENYDGQL 226
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ + ++ P I+ LS +ASG HSLAL +G ++A+G + G+LG
Sbjct: 227 GDGTTVTRR-------VPVPIQGLS--GIVAVASGTSHSLALRYDGNVWAWGSNYSGQLG 277
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----- 379
++ +P+ + I S+ G S A+ +G ++ WG+ QLG+G
Sbjct: 278 ---DGSSLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIAR 334
Query: 380 -------------------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
+ + I+A+G + G+ G ++ S + T +
Sbjct: 335 SVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTIL--- 391
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+ ++A N S A+ S+G L+ WG N QLG+G + P ++ G V+
Sbjct: 392 --NEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLGN------VV 443
Query: 481 QVASGGQHSVIL 492
VA+G +HS+ +
Sbjct: 444 SVAAGRRHSLAV 455
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 206/508 (40%), Gaps = 109/508 (21%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G V R+ ++ L +V V G H++ L DG V+ WG N
Sbjct: 213 GTVWAWGENYDGQLGDGTTV-TRRVPVPIQGLSGIVAVASGTSHSLALRYDGNVWAWGSN 271
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + S P V V + G +S+A+ DGTV+ WG +++G +G
Sbjct: 272 YSGQLG-DGSSLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGI--NTYGQLGD 328
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P++ +SG+V +A+G H + + + ++ G GQ G SR+
Sbjct: 329 GTTIARSVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRG-----DESRSV 383
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
+ P R +++V T ++ + S G + A+G NN QLG+ ++ +
Sbjct: 384 -----YFSP------RTILNEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNR 432
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ P + +A+G+ HSLA+ +G ++A+G + G+LG
Sbjct: 433 -------WAPAEVLG----NVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLG-DGTGSSR 480
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
T P +P + I S+A G+ S A+ + L+ WG + QLG+G +
Sbjct: 481 TIPMQVPGISG--IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQG 538
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLG---LKNVSEPVT------------- 412
+ S G ++A+G + G+LG N + PV
Sbjct: 539 LSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAG 598
Query: 413 -------------------------EPTPIPSLQDKTITSIACGNCVS------FAIDSE 441
+ T IP L + I VS A+ ++
Sbjct: 599 AAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAVAVSAAKHHSLAVLAD 658
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKI 469
G L+ WG N QLG +++ P K+
Sbjct: 659 GTLWDWGANNYGQLGRNQDNTNPTPSKV 686
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 221/483 (45%), Gaps = 62/483 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG +R + A + L+++V VV G H++ L DG V+TWG N
Sbjct: 85 GAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVSVVSGDAHSLALGADGTVWTWGSN 144
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D PQ V V ++AGD HS+ L DGTV+AWG+ + HG +G
Sbjct: 145 SSGQLGDGTTTD-RAEPQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGT--NFHGQLGQ 201
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
P + + G+V +A+G D + + + G + + G GQLG TQR
Sbjct: 202 GHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQR---- 257
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQK 273
L P +P I V G Y+ K G++ +G N+ QLG+ +
Sbjct: 258 --------LSPERIP-TLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRA 308
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
P + + + +AS SLAL G + A+G ++ G+LG + ++ T
Sbjct: 309 -------VPAPLPGVGGAR--AVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRST 359
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILNS----- 387
P+ +P L +T++ G + A+ +G L+ WG G QLG+G E ++ +
Sbjct: 360 -PSLVPEL--SAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL 416
Query: 388 ------------------EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G ++A+GR+ YG+LG V+E P +P L ++ ++A
Sbjct: 417 TNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHV-PVRVPGL--PSVRAVA 473
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
S A+ +G ++ WG QLG+G D P+ + G +VL +A+GG H
Sbjct: 474 AAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT----SVLAIAAGGSHV 529
Query: 490 VIL 492
+ L
Sbjct: 530 LAL 532
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 214/480 (44%), Gaps = 52/480 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + R +++ L + + G +H + L D + WG N
Sbjct: 686 GTVRAWGSNGYGQLGDG-TLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYN 744
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG A G S P V + +++AG +H++ + DG+V AWG+ ++ G +G
Sbjct: 745 RFGQLGLGAAGWSAR-PVQVRGIGRVERLAAGRAHALLVRADGSVVAWGA--NASGQLGD 801
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
G + + VS +ASG H ++L G + T G ++GQLG T +A
Sbjct: 802 GGTTHGARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTT-----SA 856
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
R + PG V + G + + S G++ A+G N Q+G+ E +
Sbjct: 857 R-----VAPGRVEGLEGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDR---- 907
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
TP I++LSD ++A G+ H+LA+ +G ++A+G + G+LG P P
Sbjct: 908 ---LTPRRIEALSD--VMVIALGESHALAVGEDGTVWAWGANASGQLG-DGGETPSLLPA 961
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------- 383
+ L+ + S+A G S A+ +G + WG QLG+G
Sbjct: 962 RVKGLEG--VGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGL 1019
Query: 384 -----------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L +G ++A+G + G+LG + V P + L D + S+A G
Sbjct: 1020 RAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSD--VESVAAGE 1077
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S A+ +G + WG QLG+GK L P +++ TV+ V + GQH+V L
Sbjct: 1078 QFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVAL 1137
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 205/465 (44%), Gaps = 60/465 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G ++GQLG G + R+ V + + V G H + L EDG V+ WG N
Sbjct: 986 GTAWAWGANESGQLGDGSN-QSRRVPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDN 1044
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + PQ V ++AG+ SVA+ DGT ++WGS + +G +G
Sbjct: 1045 TLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGS--NEYGQLGD 1102
Query: 157 KGEGIQKTPLKLE----SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQR 210
G + +P +++ +V + + H V L + G L G GQL G T+R
Sbjct: 1103 GKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRR 1162
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
S+ PGE+ + + V TG +++ + G++ A+G N + QLG+ +
Sbjct: 1163 SS------------PGEIRGVTR-VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT 1209
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
T P ++ L D +A+G +HS+A+ S+G ++ +G + +G+LG S
Sbjct: 1210 -------TARAVPVPVQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLG-DGTS 1259
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
E P + L+ + ++ G+ S A+ ++G + GWG QLG+G D
Sbjct: 1260 ESRALPVQVHKLEG--VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVR 1317
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
L +G ++ +G + +G+LG V+ P P P
Sbjct: 1318 LKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG-DGVTGPRMRLVPKPVSGLPAA 1376
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T+I G SFA E + WG + QLG G EP +++
Sbjct: 1377 TAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMK 1421
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 209/465 (44%), Gaps = 58/465 (12%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
P + L E L + + + G H++ LT G V+ WG N G LG P
Sbjct: 52 PASRAAQAIRLAEPL-SPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSP 110
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
+ + + V + +GD+HS+AL DGTV+ WGS +S G +G + P ++E +
Sbjct: 111 ARLPVLEDIVSVVSGDAHSLALGADGTVWTWGS--NSSGQLGDGTTTDRAEPQRVEGFTD 168
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+V +A+G H ++L S G + G GQLG+ ++ L P VP
Sbjct: 169 VVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTG----------LWPKPVPGLEG 218
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ + + + G++ ++G N++ QLG T +P I +LS
Sbjct: 219 VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGT-------FTQRLSPERIPTLS--GI 269
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-KTITSIACG 352
T +A+G +H++AL +G ++ +G + G+LG ++ P P+P + + + S+ G
Sbjct: 270 TSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAV-PAPLPGVGGARAVASLDAG 328
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSE 388
S A+ G + WG N QLG+G D L +
Sbjct: 329 ---SLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPELSAVTAVVGGAQHALALRKD 385
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G ++A+G G+LG SE P + L + +TS+A G+ S A +G ++ WG
Sbjct: 386 GTLWAWGGGLAGQLG-HGGSERHVVPATVMGLTN--VTSMATGSFHSLAALEDGSVWAWG 442
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ QLG+G + P+++ G +V VA+ G HS+ +A
Sbjct: 443 RNSYGQLGDGTVTERHVPVRVPGLP----SVRAVAAAGHHSIAVA 483
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 214/487 (43%), Gaps = 67/487 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G+ GQLG G +R V L +V+ + GG H + L DG V+ WG N
Sbjct: 486 GTVWTWGRNAAGQLGDG-TTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYN 544
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG GD + P V ++AG S+AL DGTV+ WG + G +G
Sbjct: 545 ALGQLGDGTSGD-KLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFE--GQLG- 600
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSAS 213
G G+Q+ +P+ ++ +S I I+ G+ H + + G + G +GQL G R A
Sbjct: 601 DGGGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAP 660
Query: 214 RNARR--GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
R G++ + G R H + + + G++ A+G N Y QLG+
Sbjct: 661 VQVRNLTGITAVSGG-----RSH---------SLALHADGTVRAWGSNGYGQLGDGTL-- 704
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
T P +I LS L G H LAL+++ + +G + +G+LGL
Sbjct: 705 -----TSRVLPSVIPGLS--GIQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGW- 756
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------- 378
P+ + +A G + + ++G + WG QLG+
Sbjct: 757 --SARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVR 814
Query: 379 -----------GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
G+ +L +G ++ +G + G+LG S V P + L+ I +
Sbjct: 815 GVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVA-PGRVEGLEG--IVA 871
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+A G S A+ S+G ++ WG Q+G+G +D L P +IE L++ V+ +A G
Sbjct: 872 VAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIE--ALSD--VMVIALGES 927
Query: 488 HSVILAK 494
H++ + +
Sbjct: 928 HALAVGE 934
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 220/488 (45%), Gaps = 73/488 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G V ER V L +V V G H++ + DG V+TWG N
Sbjct: 436 GSVWAWGRNSYGQLGDG-TVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRN 494
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D P V+ + I+AG SH +AL DG V+AWG ++ G +G
Sbjct: 495 AAGQLGDGTTRDRAR-PVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWG--YNALGQLGD 551
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
G + TP+++ ++ I +A+G + L + G + T G +GQLG
Sbjct: 552 GTSGDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGD---------- 601
Query: 217 RRGMSFLEPGEVPLK-RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
G+ L P V +K I ++ G + + G++ A+G NN QLG+ S + +
Sbjct: 602 GGGVQRLSP--VAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDG-SWMDR- 657
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
F P +++L+ T ++ G+ HSLAL+++G + A+G + YG+LG ++ V
Sbjct: 658 -----FAPVQVRNLT--GITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVL- 709
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
P+ IP L I ++ G+ A+ ++ L GWG QLG G
Sbjct: 710 PSVIPGLSG--IQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIG 767
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
++ ++G + A+G + G+LG + + T+ ++C
Sbjct: 768 RVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTH---------GARAVTVRGVSC 818
Query: 431 GNCV------SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
V S + +G ++ WG QLG+G + P ++EG + ++ VA
Sbjct: 819 ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLE----GIVAVAG 874
Query: 485 GGQHSVIL 492
GG S+ L
Sbjct: 875 GGDTSLAL 882
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 188/446 (42%), Gaps = 66/446 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G V +L +V V G +V + DG ++WG N
Sbjct: 1036 GAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSN 1095
Query: 97 DEGALGREAEGDSEFIPQTVNL----PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ G LG G P V + + V + A H+VAL+ DGT+ AWG ++ G
Sbjct: 1096 EYGQLGDGKTG-PRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGD--NATG 1152
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G + +P ++ V+ + +++GA H + L G + G GQLG T
Sbjct: 1153 QLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT--- 1209
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEAD 268
AR VP+ + + DV G ++ + S G++ +G N + QLG+
Sbjct: 1210 --TAR---------AVPVPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGT 1258
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
SE + P + L + + G HHSLAL+++G + +G + G+LG +
Sbjct: 1259 SESRA-------LPVQVHKL--EGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSR 1309
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN-- 386
++ TP+ +T + G + A+ +G ++ WG QLG+G +
Sbjct: 1310 TD---RYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLV 1366
Query: 387 ------------------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
E + +GR+ +G+LG+ + + P EP + L
Sbjct: 1367 PKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGD-NAPRAEPQRMKLLSG 1425
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWG 448
+ IA G S A+ EGVL WG
Sbjct: 1426 LKV--IAGGADTSLAMTQEGVLMSWG 1449
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G R V+ L +VV + GG H+V + DG V+TWG N
Sbjct: 1191 GTVWAWGANGFGQLGDG-TTTARAVPVPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWGYN 1249
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + +S +P V+ + ++ GD HS+AL DGTV WG ++ G +G
Sbjct: 1250 TFGQLG-DGTSESRALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWG--HNASGQLGD 1306
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP++L+ V G+ ++ +GA H V L G + T G GQLG R
Sbjct: 1307 GSRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLV 1366
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS-KGSILAFGLNNYSQLGEADSEVQKSG 275
+ +S L + G +++F S + +G N++ QLG D
Sbjct: 1367 PKPVSGLPAATA---------IGAGAWHSFASGPEEGAFTWGRNSHGQLGVGD------- 1410
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
N P +K LS K ++A G SLA+ EG + ++G +G LGL
Sbjct: 1411 NAPRAEPQRMKLLSGLK--VIAGGADTSLAMTQEGVLMSWGSSLHGTLGL 1458
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 72/183 (39%), Gaps = 54/183 (29%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R T ++D+D + EV G HTV L +DG V+TWG N
Sbjct: 1291 GTVSGWGHNASGQLGDGSRT-DRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDN 1349
Query: 97 DEGALGREAEGDS-EFIPQTVNLPKKAVQISAGDSHS----------------------- 132
G LG G +P+ V+ A I AG HS
Sbjct: 1350 AHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVG 1409
Query: 133 ---------------------------VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP 165
+A+ ++G + +WGS HG++GL G + +P
Sbjct: 1410 DNAPRAEPQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGS--SLHGTLGLGVLGQRASP 1467
Query: 166 LKL 168
++
Sbjct: 1468 GRV 1470
>gi|212528472|ref|XP_002144393.1| Ran exchange factor Prp20/Pim1, putative [Talaromyces marneffei
ATCC 18224]
gi|210073791|gb|EEA27878.1| Ran exchange factor Prp20/Pim1, putative [Talaromyces marneffei
ATCC 18224]
Length = 494
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 189/414 (45%), Gaps = 70/414 (16%)
Query: 39 VLTCGQGDTGQLGLGP----DVMERKTFALVE-DLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G+G G+LGLGP DV + +L++ D VV++ GGMH V LT DG V TW
Sbjct: 52 VYVFGEGSAGELGLGPKNATDVTSPRLNSLLDADEVGVVDIAAGGMHAVALTYDGHVLTW 111
Query: 94 GCNDEGALGREAEGDS------------------------EFIPQTVNL-----PKKAVQ 124
G ND ALGRE D E P + + VQ
Sbjct: 112 GVNDNDALGRETAWDGGVKDITEGDDASDDDSEDGELNPYESTPTAIPTEIFGKSARIVQ 171
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-----KGEGIQK--TPLKLESVSGIVKI 177
++AGDS S AL E G VY WG+F + G + + I+K P+ + + IV+I
Sbjct: 172 VTAGDSASFALTEKGFVYGWGTFVSNEAKNGFYWNQRQNQVIEKQNKPMLIPKLEKIVQI 231
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRG-------MSFLEPGEV 228
++G + + L + G + + G EQ QLGR + R S + ++ + L PG V
Sbjct: 232 SAGYNFCLALNAAGKVYSWGMSEQNQLGRRLVLGRQYSTSVKQDDLDKLYLRAGLIPGLV 291
Query: 229 PLKRK-HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN-TCFFTPHLI 285
P K I V G + F I G A+GLNN+ Q G +V N T P +
Sbjct: 292 PFSSKTKIVSVHAGSDHAFAIDQHGDTWAWGLNNFGQTG---IKVGAGANGTTVIAPQKV 348
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK- 344
+SL+ K ++ G HHS+ +N G+ +GR D ++G+ + PV P + S + K
Sbjct: 349 QSLAGKNMKIIRGGTHHSIGVNQAGECLVWGRMDGAQMGIDLSTIPVDNPQIVVSERGKP 408
Query: 345 ------------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDIL 385
+ + +A G+ + I SEG Y WG YQ G G + DDIL
Sbjct: 409 RILLEPTALPISSCSFVAAGSDHNILITSEGRAYSWGFNTNYQCGQGADGDDIL 462
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 167/412 (40%), Gaps = 96/412 (23%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR----------ITQRSASRNARRGMSF 222
G+V IA+G H V LT G++LT G + LGR IT+ + +
Sbjct: 88 GVVDIAAGGMHAVALTYDGHVLTWGVNDNDALGRETAWDGGVKDITEGDDASDDDSEDGE 147
Query: 223 LEPGE-----VPL----KRKHIDDVFTGVYNTF-ISSKGSILAFG--LNNYSQLG----E 266
L P E +P K I V G +F ++ KG + +G ++N ++ G +
Sbjct: 148 LNPYESTPTAIPTEIFGKSARIVQVTAGDSASFALTEKGFVYGWGTFVSNEAKNGFYWNQ 207
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
++V + N P L +K +++G + LALN+ GK+Y++G + +LG +
Sbjct: 208 RQNQVIEKQNKPMLIPKL------EKIVQISAGYNFCLALNAAGKVYSWGMSEQNQLGRR 261
Query: 327 NV-----SEPVTE-------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
V S V + P +P I S+ G+ +FAID G + W
Sbjct: 262 LVLGRQYSTSVKQDDLDKLYLRAGLIPGLVPFSSKTKIVSVHAGSDHAFAIDQHGDTWAW 321
Query: 369 GMGNGYQLG---------------------NGKEDDIL----------NSEGKIYAFGRH 397
G+ N Q G GK I+ N G+ +GR
Sbjct: 322 GLNNFGQTGIKVGAGANGTTVIAPQKVQSLAGKNMKIIRGGTHHSIGVNQAGECLVWGRM 381
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDK-------------TITSIACGNCVSFAIDSEGVL 444
D ++G+ + PV P + S + K + + +A G+ + I SEG
Sbjct: 382 DGAQMGIDLSTIPVDNPQIVVSERGKPRILLEPTALPISSCSFVAAGSDHNILITSEGRA 441
Query: 445 YGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
Y WG YQ G G + DDIL I+ + + +GGQ+S +LA P
Sbjct: 442 YSWGFNTNYQCGQGADGDDILVATPIDNTAIRGKKLTWAGAGGQYS-MLAGP 492
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 105/281 (37%), Gaps = 60/281 (21%)
Query: 210 RSASRNARRGMSFLEPGE----VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
+S RR EP + R H T N +++ ++ FG + +LG
Sbjct: 5 KSTYSRKRRSEVVPEPSKCLKSTTTSRSHKTSSTTLTKNKVSTTRLNVYVFGEGSAGELG 64
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKK---FTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
N T + SL D +A+G H++AL +G + +G +D
Sbjct: 65 LGPK------NATDVTSPRLNSLLDADEVGVVDIAAGGMHAVALTYDGHVLTWGVNDNDA 118
Query: 323 LG--------LKNVSEPV----------------TEPTPIPSL---QDKTITSIACGNCV 355
LG +K+++E + PT IP+ + I + G+
Sbjct: 119 LGRETAWDGGVKDITEGDDASDDDSEDGELNPYESTPTAIPTEIFGKSARIVQVTAGDSA 178
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
SFA+ +G +YGWG + NG Y R + V E +P
Sbjct: 179 SFALTEKGFVYGWGTFVSNEAKNG-----------FYWNQRQN-------QVIEKQNKPM 220
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
IP L+ I I+ G A+++ G +Y WGM QLG
Sbjct: 221 LIPKLEK--IVQISAGYNFCLALNAAGKVYSWGMSEQNQLG 259
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 312 IYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKT---ITSIACGNCVSFAIDSEGVLY 366
+Y FG G LGL KN ++ VT P + SL D + IA G + A+ +G +
Sbjct: 52 VYVFGEGSAGELGLGPKNATD-VTSPR-LNSLLDADEVGVVDIAAGGMHAVALTYDGHVL 109
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL---QDK 423
WG+ + LG +E I ++ + PT IP+ +
Sbjct: 110 TWGVNDNDALG--RETAWDGGVKDITEGDDASDDDSEDGELNPYESTPTAIPTEIFGKSA 167
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGM------GNGYQLGNGKEDDILE----PMKI 469
I + G+ SFA+ +G +YGWG NG+ N +++ ++E PM I
Sbjct: 168 RIVQVTAGDSASFALTEKGFVYGWGTFVSNEAKNGFYW-NQRQNQVIEKQNKPMLI 222
>gi|145545147|ref|XP_001458258.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426077|emb|CAK90861.1| unnamed protein product [Paramecium tetraurelia]
Length = 492
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 221/447 (49%), Gaps = 61/447 (13%)
Query: 55 DVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA--EGDSE 110
+V E K ++ L+N + +V GGMH + LT GKVY++GC+D+G LGR E D+
Sbjct: 31 EVYEVKRPYQIQTLNNLSITQVACGGMHALLLTSQGKVYSFGCDDKGMLGRPKIEEQDAR 90
Query: 111 FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
++LP + I+ G SHS+A +G VY WG + ++HG +G E +QK P K+++
Sbjct: 91 VPALIIDLPPVDM-IACGSSHSIAANSNGLVYFWGFYANTHGPIG---EPVQK-PKKMDN 145
Query: 171 VS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
++ GI KI G +H ++L LLT G E +GR +S +R R + L P +
Sbjct: 146 ITEGIKKILCGQNHTMVLLESQKLLTWGDAETLVIGR---KSETR--RSIIQNLNPQPIK 200
Query: 230 LKRKHIDDVFTGVYNTFIS-----SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
+K K I ++FTG + F+ +K I +GLNNY QLG ++ E Q+ P
Sbjct: 201 MK-KPILNIFTGASHAFVKVQMKDNKVGIYGWGLNNYGQLGISNQENQQ-------LPVF 252
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQD 343
++ ++ + G+HH++AL+SEG +Y+FGRHD G+LGL + +++ + E ++
Sbjct: 253 VEFFNNIDVIDMVGGEHHTIALDSEGNLYSFGRHDDGQLGLGEEINQKLKEQAQKQLEEE 312
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG 403
+ GN + ++ +G+++ + D +G
Sbjct: 313 MQSQKLNEGNKKKISKKNK------------------------QQGELFEIQKSD-KVIG 347
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ ++ P IP +Q SI +FAI + ++ WG G + LG E+
Sbjct: 348 YEFITAPQM-IQDIPKMQ-----SIYSSMHFNFAISQQSQIFSWGNGQSFVLGTRNENSQ 401
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSV 490
+P I L N +L ++ G H +
Sbjct: 402 FKPKDITTI-LKNEKLLYISLGASHVI 427
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P+ I++L++ T +A G H+L L S+GK+Y+FG D G LG + E + +P+L
Sbjct: 38 PYQIQTLNNLSITQVACGGMHALLLTSQGKVYSFGCDDKGMLGRPKIEE---QDARVPAL 94
Query: 342 --QDKTITSIACGNCVSFAIDSEGVLYGWGMGN------GYQLGNGKEDD---------- 383
+ IACG+ S A +S G++Y WG G + K+ D
Sbjct: 95 IIDLPPVDMIACGSSHSIAANSNGLVYFWGFYANTHGPIGEPVQKPKKMDNITEGIKKIL 154
Query: 384 -------ILNSEGKIYAFGRHDYGRLGLKNVSEP--VTEPTPIPSLQDKTITSIACGNCV 434
+L K+ +G + +G K+ + + P P K I +I G
Sbjct: 155 CGQNHTMVLLESQKLLTWGDAETLVIGRKSETRRSIIQNLNPQPIKMKKPILNIFTGASH 214
Query: 435 SFA----IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+F D++ +YGWG+ N QLG +++ P+ +E NN V+ + G H++
Sbjct: 215 AFVKVQMKDNKVGIYGWGLNNYGQLGISNQENQQLPVFVEF--FNNIDVIDMVGGEHHTI 272
Query: 491 IL 492
L
Sbjct: 273 AL 274
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEP----VTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
SE K+YA+G + + K+ + V P I +L + +IT +ACG + + S+G
Sbjct: 7 SEQKLYAWGSAECDQFLAKDEDDEEVYEVKRPYQIQTLNNLSITQVACGGMHALLLTSQG 66
Query: 443 VLYGWGMGNGYQLGNGK--EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+Y +G + LG K E D P I ++ V +A G HS+
Sbjct: 67 KVYSFGCDDKGMLGRPKIEEQDARVPALI----IDLPPVDMIACGSSHSI 112
>gi|149235440|ref|XP_001523598.1| protein RCC1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452577|gb|EDK46833.1| protein RCC1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 441
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 188/396 (47%), Gaps = 64/396 (16%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHT 81
K K+ G + G G +LGLGP ++ + E L +V+ VGGMHT
Sbjct: 47 KPKSVGLDIFVWGSGSMCELGLGPSASTKEVKRPRLNPYLTKEKLGGTQIVDFAVGGMHT 106
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEG-------------------------DSEFIPQTV 116
+ L ++++WG ND LGR+ ++E P V
Sbjct: 107 LALDGKNRIWSWGTNDSAVLGRDTSNAKEVLKDMDAAGSDGDDDDEDGDLNEAESTPGLV 166
Query: 117 -NLPK---KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGE-GIQKTPLKLES 170
N PK K VQ++A D+ S ALL +G VYAWG FR + G +G L+ E IQKTPLK++
Sbjct: 167 ENFPKEGEKIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLRDEIKIQKTPLKIKE 226
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+ +V++A+G DH + L S+G + G +Q QLGR R R+ R LEP + L
Sbjct: 227 LKNVVQLAAGKDHLLALDSKGIVFAWGNGQQFQLGR---RVLERHRFRS---LEPQQFGL 280
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+I + +G ++ F I ++ ++GLN + Q + + P LI LS
Sbjct: 281 Y--NIKYIASGDFHCFAIDHSDNVYSWGLNQFGQCALTGQNGELEDGSILTKPTLIPELS 338
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-------------VTEPT 336
+A+G+HH+LAL G++ A+GR+D +G+ P V PT
Sbjct: 339 GLGIKQIAAGEHHTLALTETGEVLAWGRYDMKEIGIPESLLPESSFKDAHGKVRSVPRPT 398
Query: 337 PIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGM 370
+ K+ I +I G+ SFA+ +G +Y WG
Sbjct: 399 KLKFGAKKSPKIKTIGVGSHHSFAVTEDGFVYAWGF 434
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 119/290 (41%), Gaps = 59/290 (20%)
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS---EVQKSG---------------- 275
+D G++ + K I ++G N+ + LG S EV K
Sbjct: 97 VDFAVGGMHTLALDGKNRIWSWGTNDSAVLGRDTSNAKEVLKDMDAAGSDGDDDDEDGDL 156
Query: 276 NTCFFTPHLIKSLSDK--KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEP 331
N TP L+++ + K LA+ + S AL S G +YA+G R + G LG E
Sbjct: 157 NEAESTPGLVENFPKEGEKIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFLR-DEI 215
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+ TP+ + K + +A G A+DS+G+++ WG G +QLG
Sbjct: 216 KIQKTPLKIKELKNVVQLAAGKDHLLALDSKGIVFAWGNGQQFQLGR------------- 262
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
RH + L EP I IA G+ FAID +Y WG+
Sbjct: 263 RVLERHRFRSL----------EPQ---QFGLYNIKYIASGDFHCFAIDHSDNVYSWGLNQ 309
Query: 452 GYQLG----NGKEDD---ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Q NG+ +D + +P I +L+ + Q+A+G H++ L +
Sbjct: 310 FGQCALTGQNGELEDGSILTKPTLIP--ELSGLGIKQIAAGEHHTLALTE 357
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG-----------REAEGDSEFIPQTVNL- 118
+ ++ G HT+ LTE G+V WG D +G ++A G +P+ L
Sbjct: 342 IKQIAAGEHHTLALTETGEVLAWGRYDMKEIGIPESLLPESSFKDAHGKVRSVPRPTKLK 401
Query: 119 --PKKAVQIS---AGDSHSVALLEDGTVYAWGSFRDSH 151
KK+ +I G HS A+ EDG VYAWG + H
Sbjct: 402 FGAKKSPKIKTIGVGSHHSFAVTEDGFVYAWGFRKRMH 439
>gi|366993066|ref|XP_003676298.1| hypothetical protein NCAS_0D03560 [Naumovozyma castellii CBS 4309]
gi|342302164|emb|CCC69937.1| hypothetical protein NCAS_0D03560 [Naumovozyma castellii CBS 4309]
Length = 485
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 205/455 (45%), Gaps = 80/455 (17%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA- 63
+KKV R A N + T + L + T G G +LGLGP ++
Sbjct: 17 IKKVSRTHARN----IINTQDDYKHLYLSVQPLDIFTWGSGPMCELGLGPLAKNKEVKRP 72
Query: 64 -----LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI------ 112
L D ++ VGGMHT+ L E+ V++WGCND GALGR+ G E +
Sbjct: 73 RLNPFLPMDSVKIISFAVGGMHTIALDEESNVWSWGCNDVGALGRDTSGAKEQLKDMADA 132
Query: 113 ------------------PQTVN---LP-----KKAVQISAGDSHSVALLEDGTVYAWGS 146
P ++ P K VQ+ A D+ S AL +G VYAWG+
Sbjct: 133 GSDSDDDDDGDLNELESTPTKIDRSMFPPLAEGHKIVQLGATDNLSCALFSNGEVYAWGT 192
Query: 147 FRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
FR + G +G + IQ+TP ++ S S IV++A G DH + L G + G +Q
Sbjct: 193 FRCNEGILGFYQDKIKIQRTPWRVPSFSKFNIVQMAPGKDHVLFLDEAGVVFAWGNGQQH 252
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK--GSILAFGLNN 260
QLGR R ++ L+P P KHI + +G + F K S++++GLN
Sbjct: 253 QLGRKVME------RFRLNTLDPR--PFGLKHIKYIASGENHCFAVKKKDDSVVSWGLNQ 304
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+ Q G ++ Q + P ++ K +++G+HHSL L +G +Y FGR D
Sbjct: 305 FGQCGISE---QVEDGSLVTVPLAVQLPEGGKIKNISAGEHHSLVLLEDGTLYTFGRLDM 361
Query: 321 GRLGL---------------KNVSEPV-TEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
+G+ K S P+ T+ T +P+ ++ IA G+ S AI + G+
Sbjct: 362 FEVGIGKDHLPRYTYKDVHGKARSVPLPTKLTGVPAFKN-----IAAGSHHSLAIATNGI 416
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+Y WG G Y +G G + + + +I D+
Sbjct: 417 VYSWGFGETYAVGLGPAGEDVETPTRIKNTATQDH 451
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 189/452 (41%), Gaps = 85/452 (18%)
Query: 90 VYTWGCND--EGALGREAEGDSEFIPQ-TVNLPKKAVQI---SAGDSHSVALLEDGTVYA 143
++TWG E LG A+ P+ LP +V+I + G H++AL E+ V++
Sbjct: 47 IFTWGSGPMCELGLGPLAKNKEVKRPRLNPFLPMDSVKIISFAVGGMHTIALDEESNVWS 106
Query: 144 WGSFRDSHGSMGLKGEG-------------------------IQKTPLKLESV------- 171
WG + G++G G ++ TP K++
Sbjct: 107 WGC--NDVGALGRDTSGAKEQLKDMADAGSDSDDDDDGDLNELESTPTKIDRSMFPPLAE 164
Query: 172 -SGIVKIASGADHFVMLTSRGNLLTAG---CPEQGQLGRITQR-SASRNARRGMSFLEPG 226
IV++ + + L S G + G C E G LG + R R SF +
Sbjct: 165 GHKIVQLGATDNLSCALFSNGEVYAWGTFRCNE-GILGFYQDKIKIQRTPWRVPSFSKFN 223
Query: 227 EVPLK--RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
V + + H+ F+ G + A+G QLG E + NT P
Sbjct: 224 IVQMAPGKDHV---------LFLDEAGVVFAWGNGQQHQLGRKVMERFRL-NTLDPRPFG 273
Query: 285 IKSLSDKKFTMLASGQHHSLALNS-EGKIYAFGRHDYGRLGLKNVSEP---VTEPTPIPS 340
+K + +ASG++H A+ + + ++G + +G+ G+ E VT P +
Sbjct: 274 LKHIK-----YIASGENHCFAVKKKDDSVVSWGLNQFGQCGISEQVEDGSLVTVPLAVQL 328
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
+ I +I+ G S + +G LY +G + +++G GK+ R+ Y
Sbjct: 329 PEGGKIKNISAGEHHSLVLLEDGTLYTFGRLDMFEVGIGKDH-----------LPRYTYK 377
Query: 401 RLGLKNVSEPV-TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
+ K S P+ T+ T +P+ ++ IA G+ S AI + G++Y WG G Y +G G
Sbjct: 378 DVHGKARSVPLPTKLTGVPAFKN-----IAAGSHHSLAIATNGIVYSWGFGETYAVGLGP 432
Query: 460 E-DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+D+ P +I+ ++ ++ V GGQ SV
Sbjct: 433 AGEDVETPTRIKNTATQDHNIILVGCGGQFSV 464
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 135/322 (41%), Gaps = 24/322 (7%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG---CNDEGALG-REAEGDS 109
P ++R F + + +V++ + L +G+VY WG CN EG LG + +
Sbjct: 151 PTKIDRSMFPPLAEGHKIVQLGATDNLSCALFSNGEVYAWGTFRCN-EGILGFYQDKIKI 209
Query: 110 EFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAWGSFRDSH-GSMGLKGEGIQKTPL 166
+ P V K VQ++ G H + L E G V+AWG+ + G ++ +
Sbjct: 210 QRTPWRVPSFSKFNIVQMAPGKDHVLFLDEAGVVFAWGNGQQHQLGRKVMERFRLNTLDP 269
Query: 167 KLESVSGIVKIASGADH-FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
+ + I IASG +H F + ++++ G + GQ G S G P
Sbjct: 270 RPFGLKHIKYIASGENHCFAVKKKDDSVVSWGLNQFGQCG------ISEQVEDGSLVTVP 323
Query: 226 GEVPLKRK-HIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSG-----NTC 278
V L I ++ G +++ + G++ FG + ++G + +
Sbjct: 324 LAVQLPEGGKIKNISAGEHHSLVLLEDGTLYTFGRLDMFEVGIGKDHLPRYTYKDVHGKA 383
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P K F +A+G HHSLA+ + G +Y++G + +GL E V PT I
Sbjct: 384 RSVPLPTKLTGVPAFKNIAAGSHHSLAIATNGIVYSWGFGETYAVGLGPAGEDVETPTRI 443
Query: 339 P--SLQDKTITSIACGNCVSFA 358
+ QD I + CG S +
Sbjct: 444 KNTATQDHNIILVGCGGQFSVS 465
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 87/237 (36%), Gaps = 62/237 (26%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---------LKN--------------- 327
K A G H++AL+ E ++++G +D G LG LK+
Sbjct: 84 KIISFAVGGMHTIALDEESNVWSWGCNDVGALGRDTSGAKEQLKDMADAGSDSDDDDDGD 143
Query: 328 VSEPVTEPTPI------PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
++E + PT I P + I + + +S A+ S G +Y WG
Sbjct: 144 LNELESTPTKIDRSMFPPLAEGHKIVQLGATDNLSCALFSNGEVYAWGTF---------- 193
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDS 440
R + G LG + P +PS I +A G +D
Sbjct: 194 --------------RCNEGILGFYQDKIKIQRTPWRVPSFSKFNIVQMAPGKDHVLFLDE 239
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
GV++ WG G +QLG ++E + ++ + + +ASG H + K
Sbjct: 240 AGVVFAWGNGQQHQLGR----KVMERFRLNTLDPRPFGLKHIKYIASGENHCFAVKK 292
>gi|401625749|gb|EJS43742.1| srm1p [Saccharomyces arboricola H-6]
Length = 482
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 179/398 (44%), Gaps = 65/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G G +LGLGP ++ L D ++ VGGMHT+ L ED V++
Sbjct: 48 VFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTIALDEDSNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR EAE IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDANDSSDDEDGDLNEAESTPTKIPRECFPPLAKGYKI 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG--IQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G E IQ TP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQEKIRIQTTPWKVPTFSKYDIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDQEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM-L 296
+G + F +K ++++GLN + Q G SE + G T SL D +
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SENVEDG--ALVTKPKKLSLPDGVIVRSI 335
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 345
A+G+HHSL L+ EG +Y+ GR D +G+ P P+P+
Sbjct: 336 AAGEHHSLILSQEGDLYSCGRLDMFEVGIPKSDLPEYTYKDVHGKARAVPLPTKLKNVPK 395
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
SIA G+ S A+ G+ Y WG G Y +G G +D
Sbjct: 396 FKSIAAGSHHSVAVSQNGIAYSWGFGETYAVGLGPSED 433
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 101/274 (36%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G + +LG K P L + + K A G H++AL+ + +
Sbjct: 48 VFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTIALDEDSNV 105
Query: 313 YAFGRHDYGRLG---------LKN-------------VSEPVTEPTPIPS------LQDK 344
+++G +D G LG LK+ ++E + PT IP +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDANDSSDDEDGDLNEAESTPTKIPRECFPPLAKGY 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
I +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KIVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPV-TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ T P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQEKIRIQTTPWKVPTFSKYDIVQLAPGKDHILFLDQEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|302663734|ref|XP_003023505.1| hypothetical protein TRV_02355 [Trichophyton verrucosum HKI 0517]
gi|291187507|gb|EFE42887.1| hypothetical protein TRV_02355 [Trichophyton verrucosum HKI 0517]
Length = 490
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 193/418 (46%), Gaps = 70/418 (16%)
Query: 39 VLTCGQGDTGQLGLGP-DVMERKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYTW 93
V G G + +LGLGP + ++ K L +LD VV++ GGMH LT D + TW
Sbjct: 47 VYVFGSGSSAELGLGPKNAIDVKRPRLNTNLDAEKVGVVDIGAGGMHAAALTHDNHILTW 106
Query: 94 GCNDEGALGRE----------AEGDSEFIPQTVNL-PKKAV------------------- 123
G ND ALGRE A+ D F V L P++A+
Sbjct: 107 GVNDNCALGRETAWDGGLKDMADDDESFASDEVELNPREAIPTAIQAIPREKFPEDTKFC 166
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGI--QKTPLKLESVSGIVKIASG 180
Q++AGDS + AL EDG VY WGSF + G G GE I Q P+ + + I++I++G
Sbjct: 167 QVAAGDSATFALTEDGFVYGWGSFVTTEGERGWWNGELIKMQLDPVMIPGLEKIIQISAG 226
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLG---RITQRSASRNARRGMSFLE------PGEVPL- 230
+ + L +G + + G PEQ QLG R+ +R + N + L PG V L
Sbjct: 227 NNFCLALDHKGRVFSWGRPEQDQLGRHIRVDRRKTAGNKNASIDKLRNDIGLIPGLVALP 286
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K K I + G ++F I + G +GLNN+ Q + K G+T P L
Sbjct: 287 KSKRIISIHAGSDHSFAIDTNGDTWTWGLNNFGQTA-VNVGAGKGGST-IVRPQKATMLI 344
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK----NVSEP------------VT 333
+K M+ G+HHS+ + +G+ +GR D ++G+ ++ +P +
Sbjct: 345 GQKMKMIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDHSTLHLDDPQIVISERGKPRILL 404
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
EPTP+P A G+ + I SEG Y WG+ YQ G G + D + KI
Sbjct: 405 EPTPLPI---PNCAFAAAGSDHNVLITSEGKAYTWGINATYQCGQGPDTDDIQVATKI 459
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 235/502 (46%), Gaps = 62/502 (12%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV 76
S V V + + +L ++ G G +G+LG G R V L V
Sbjct: 82 SDAVLVAAGSSHSLAIRSDG-TAWAWGHNGSGELGDGT-TFRRTRPVQVTGLSEAEAVAA 139
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G H++ + DG V+ WG N +G LG + +P V V+++AGD HS+A+
Sbjct: 140 GDGHSLVVRSDGTVWAWGWNSDGQLG-DGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVC 198
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
DGTV+AWG R+ G +G G +Q++ P+++ +SG+V +A+G+ H + + S G +
Sbjct: 199 LDGTVWAWG--RNDSGQLG-DGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWA 255
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSIL 254
G GQLG T +AR L P +V + V G++++ + S G++
Sbjct: 256 WGRNSDGQLGDGTT-----SAR-----LTPVQVTGLSGGVA-VAAGMFHSLAVRSDGTVW 304
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
A+G N QLG+ T TP LS+ + +A+G+ HSL S+G ++A
Sbjct: 305 AWGQNTRGQLGDGSM-------TASLTPVQAIGLSEGE--AVAAGETHSLVARSDGTVWA 355
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G + G+ G ++ T P + +L ++A G + A+ S+G ++ WG
Sbjct: 356 WGNNIEGQRG-DGSAKTSTAPVQVTALSGGF--TVAAGKAHALAVRSDGTVWAWGQNLFG 412
Query: 375 QLGNGKE---------------------DDI---LNSEGKIYAFGRHDYGRLGLKNVSEP 410
QLG+G DD L +G ++A+G++ G+LG ++
Sbjct: 413 QLGDGTRMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQ- 471
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P P+ + + ++A G S A+ S+G ++ WG QLG+G L P+++
Sbjct: 472 --RPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVA 529
Query: 471 GKQLNNYTVLQVASGGQHSVIL 492
G V+ VA+G HS+ +
Sbjct: 530 GLS----GVVAVAAGYFHSLAV 547
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 219/480 (45%), Gaps = 57/480 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ER V L V+V G H++ + DG V+ WG N
Sbjct: 151 GTVWAWGWNSDGQLGDGT-TRERHVPVQVAGLSGGVKVAAGDGHSLAVCLDGTVWAWGRN 209
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG + P V V ++AG SHS+A+ DGTV+AWG R+S G +G
Sbjct: 210 DSGQLG-DGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAWG--RNSDGQLGD 266
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP+++ +SG V +A+G H + + S G + G +GQLG + +AS
Sbjct: 267 GTTSARLTPVQVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM-TASLTP 325
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ + E V H + S G++ A+G N Q G+ ++ +
Sbjct: 326 VQAIGLSEGEAVAAGETH---------SLVARSDGTVWAWGNNIEGQRGDGSAKTSTA-- 374
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P + +LS FT +A+G+ H+LA+ S+G ++A+G++ +G+LG T P
Sbjct: 375 -----PVQVTALS-GGFT-VAAGKAHALAVRSDGTVWAWGQNLFGQLG-DGTRMQRTAPV 426
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------- 383
+ L ++A G+ S + +G ++ WG QLG+G
Sbjct: 427 QVTGLSGGV--AVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAPVQVTELSGV 484
Query: 384 -----------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
++S+G ++A+G + G+LG +T P + L + ++A G
Sbjct: 485 VAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLT-PVQVAGLSG--VVAVAAGY 541
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S A+ S+G ++ WG + +QLG+G P+++ G + A+G HS++L
Sbjct: 542 FHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTPVRVPGLSGG----VAAAAGYFHSLVL 597
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 210/462 (45%), Gaps = 59/462 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G R T V L V V G H++ + DG V+ WG N
Sbjct: 251 GTVWAWGRNSDGQLGDGT-TSARLTPVQVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQN 309
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + S Q + L + ++AG++HS+ DGTV+AWG+ + G
Sbjct: 310 TRGQLGDGSMTASLTPVQAIGLSEGEA-VAAGETHSLVARSDGTVWAWGNNIE-----GQ 363
Query: 157 KGEGIQKT---PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+G+G KT P+++ ++SG +A+G H + + S G + G GQLG T+
Sbjct: 364 RGDGSAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQ-- 421
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
R A ++ L G + DD ++ + G++ A+G N QLG+ + +
Sbjct: 422 RTAPVQVTGLSGG---VAVAAGDD-----HSLGLCLDGTVWAWGQNTSGQLGDGTTAQRP 473
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
+ P + LS +A+G HSLA++S+G ++A+G + G+LG +T
Sbjct: 474 A-------PVQVTELS--GVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLT 524
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
P + L + ++A G S A+ S+G ++ WG + +QLG+G
Sbjct: 525 -PVQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTPVRVPGL 581
Query: 384 --------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+L S+G ++ +G + YG+LG + P + L ++A
Sbjct: 582 SGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLG-NGTANASFSPVQVTGLSGGV--AVA 638
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G+ S A+ S+G + WG QLG+G L P+ + G
Sbjct: 639 AGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPVGVNG 680
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 203/453 (44%), Gaps = 67/453 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V GQ GQLG G + T L V G H++ DG V+ WG N
Sbjct: 301 GTVWAWGQNTRGQLGDG-SMTASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNN 359
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EG G + + P V ++AG +H++A+ DGTV+AWG ++ G +G
Sbjct: 360 IEGQRG-DGSAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWG--QNLFGQLG- 415
Query: 157 KGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G +Q+T P+++ +SG V +A+G DH + L G + G GQLG T +A R
Sbjct: 416 DGTRMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGT--TAQRP 473
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNT----FISSKGSILAFGLNNYSQLGEADSEV 271
A P++ + V T +SS G++ A+G N QLG+ +
Sbjct: 474 A------------PVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRA 521
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-LKNVSE 330
+ TP + LS +A+G HSLA+ S+G ++A+G + + +LG N
Sbjct: 522 R-------LTPVQVAGLS--GVVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQR 572
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDD------ 383
P P +P L + A G S + S+G ++GWG N Y QLGNG +
Sbjct: 573 PT--PVRVPGLSGGV--AAAAGYFHSLVLRSDGTVWGWGN-NAYGQLGNGTANASFSPVQ 627
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ S+G + A+G + YG+LG V+ + P + L
Sbjct: 628 VTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRL-APVGVNGLSGGM- 685
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
++A GN S A+ S G+L+ WG QLG+G
Sbjct: 686 -AVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHG 717
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 202/448 (45%), Gaps = 64/448 (14%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
+ GG H++ + DG V+ G N G LG + Q V L AV ++AG SHS
Sbjct: 36 RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGL-SDAVLVAAGSSHS 94
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTS 189
+A+ DGT +AWG H G G+G + P+++ +S +A+G H +++ S
Sbjct: 95 LAIRSDGTAWAWG-----HNGSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDGHSLVVRS 149
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG-EVPLKRKHIDDVFTGVYNTFIS 248
G + G GQLG T R R+ ++ L G +V H + +
Sbjct: 150 DGTVWAWGWNSDGQLGDGTTR--ERHVPVQVAGLSGGVKVAAGDGH---------SLAVC 198
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G++ A+G N+ QLG+ + VQ+S P + LS +A+G HSLA+ S
Sbjct: 199 LDGTVWAWGRNDSGQLGDG-TTVQRS------APVQVAGLS--GVVAVAAGSSHSLAVRS 249
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G ++A+GR+ G+LG S +T P + L ++A G S A+ S+G ++ W
Sbjct: 250 DGTVWAWGRNSDGQLGDGTTSARLT-PVQVTGLSGG--VAVAAGMFHSLAVRSDGTVWAW 306
Query: 369 GMGNGYQLGNGK------------------------EDDILNSEGKIYAFGRHDYGRLGL 404
G QLG+G + S+G ++A+G + G+ G
Sbjct: 307 GQNTRGQLGDGSMTASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRG- 365
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
++ T P + +L ++A G + A+ S+G ++ WG QLG+G
Sbjct: 366 DGSAKTSTAPVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRT 423
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+++ G + VA+G HS+ L
Sbjct: 424 APVQVTGLSGG----VAVAAGDDHSLGL 447
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 143/299 (47%), Gaps = 27/299 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V GQ +GQLG G +R V +L VV V G H++ ++ DG V+ WG N
Sbjct: 451 GTVWAWGQNTSGQLGDGT-TAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSN 509
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + P V V ++AG HS+A+ DGTV+AWG+ +S +G
Sbjct: 510 ASGQLG-DGTTRARLTPVQVAGLSGVVAVAAGYFHSLAVRSDGTVWAWGN--NSFFQLG- 565
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G Q+ TP+++ +SG V A+G H ++L S G + G GQLG T ++
Sbjct: 566 DGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANAS--- 622
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
P +V + V G + + + S G++ A+G N Y QLG D V
Sbjct: 623 -------FSPVQVTGLSGGVA-VAAGDFQSLAVRSDGTVRAWGDNIYGQLG--DGTV--- 669
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
T P + LS +A+G SLA++S G ++A+G + G+LG S VT
Sbjct: 670 --TTRLAPVGVNGLSGGM--AVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHGGPSVYVT 724
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+D+ + LA+G HSLA+ +G ++A G + G+LG SE P + L D +
Sbjct: 30 ADEGKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRV-PAQVVGLSDAVL-- 86
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK------------------------EDDI 384
+A G+ S AI S+G + WG +LG+G +
Sbjct: 87 VAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDGHSLV 146
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ S+G ++A+G + G+LG E P + L +A G+ S A+ +G +
Sbjct: 147 VRSDGTVWAWGWNSDGQLGDGTTRERHV-PVQVAGLSGG--VKVAAGDGHSLAVCLDGTV 203
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ WG + QLG+G P+++ G V+ VA+G HS+ +
Sbjct: 204 WAWGRNDSGQLGDGTTVQRSAPVQVAGLS----GVVAVAAGSSHSLAV 247
>gi|378732654|gb|EHY59113.1| hypothetical protein HMPREF1120_07112 [Exophiala dermatitidis
NIH/UT8656]
Length = 579
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 190/404 (47%), Gaps = 69/404 (17%)
Query: 39 VLTCGQGDTGQLGLGPDVME------RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G+G +G+LGLG + R L D VV + VGGMHT LT ++ T
Sbjct: 140 VYVFGEGSSGELGLGSAKGQTEVKRPRYNPNLSPDTVGVVALSVGGMHTAALTHGNRILT 199
Query: 93 WGCNDEGALGRE---------------------------AEGDSEFIPQTVNL---PKKA 122
WG ND+GALGR+ A E P V++ P+
Sbjct: 200 WGVNDQGALGRDTNWEGGLRDIDEDAGSDDDDSDSGSETAVNPKESTPGEVDMSGVPEGV 259
Query: 123 V--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIAS 179
V Q++ DS + AL +G VY WG+FR + G G IQ P ++ + I+K+A+
Sbjct: 260 VFTQLACTDSATFALTSEGEVYGWGTFRSNEGIFGFDPTTLIQLRPKLIKGLKNIIKLAA 319
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
GA+H + L S G +L G +Q QLGR RR + L P + L +K I +
Sbjct: 320 GANHVLALQSNGIVLGWGSGQQNQLGRRILE------RRAANSLVPMPIGLPKK-IVHIG 372
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSLSDK-KFT 294
G YN+F + G +L++GLNN+ Q G E D E S + P +I++L + +
Sbjct: 373 AGAYNSFAVRENGDVLSWGLNNFGQTGIPKEFD-ETGASKSADVHHPIVIETLHGRGQVI 431
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPS 340
+ G HH++A+ +G++ +GR D +LG+K P +T P IP+
Sbjct: 432 CIQGGAHHTVAVTDKGELLVWGRLDGNQLGIKVSDLPQEHIVRDSAGHPRILTVPAQIPN 491
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ D + +C+ AID +G Y WG YQ G G +DD+
Sbjct: 492 I-DAVHAAAGSDHCI--AIDRKGKAYAWGFSTTYQTGLGTDDDV 532
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 186/484 (38%), Gaps = 116/484 (23%)
Query: 108 DSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---KGEG 160
DS+ Q PK A V+ A +H A E VY +G S G +GL KG+
Sbjct: 105 DSKPAEQRAAAPKTATARKVKPKAEINH--APTEKLNVYVFG--EGSSGELGLGSAKGQT 160
Query: 161 IQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
K P ++S G+V ++ G H LT +LT G +QG LGR T N
Sbjct: 161 EVKRPRYNPNLSPDTVGVVALSVGGMHTAALTHGNRILTWGVNDQGALGRDT------NW 214
Query: 217 RRGMSFLE------------------------PGEVPLKRKHIDDVFTGVYNT-----FI 247
G+ ++ PGEV + VFT + T +
Sbjct: 215 EGGLRDIDEDAGSDDDDSDSGSETAVNPKESTPGEVDMSGVPEGVVFTQLACTDSATFAL 274
Query: 248 SSKGSILAFGL--NNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+S+G + +G +N G + + +Q P LIK L K LA+G +H L
Sbjct: 275 TSEGEVYGWGTFRSNEGIFGFDPTTLIQ-------LRPKLIKGL--KNIIKLAAGANHVL 325
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP-TPIPSLQDKTITSIACGNCVSFAIDSEG 363
AL S G + +G +LG + + P+P K I I G SFA+ G
Sbjct: 326 ALQSNGIVLGWGSGQQNQLGRRILERRAANSLVPMPIGLPKKIVHIGAGAYNSFAVRENG 385
Query: 364 VLYGWGMGNGYQLGNGKEDD------------------------------------ILNS 387
+ WG+ N Q G KE D +
Sbjct: 386 DVLSWGLNNFGQTGIPKEFDETGASKSADVHHPIVIETLHGRGQVICIQGGAHHTVAVTD 445
Query: 388 EGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDKTITSIACGNC 433
+G++ +GR D +LG+K P +T P IP++ D + +C
Sbjct: 446 KGELLVWGRLDGNQLGIKVSDLPQEHIVRDSAGHPRILTVPAQIPNI-DAVHAAAGSDHC 504
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ AID +G Y WG YQ G G +DD+ I+ + + ++ +GGQ SV+
Sbjct: 505 I--AIDRKGKAYAWGFSTTYQTGLGTDDDVEVATMIDNTAVRDKKLVWAGAGGQFSVLAG 562
Query: 494 KPKP 497
P P
Sbjct: 563 LPTP 566
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 223/486 (45%), Gaps = 71/486 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G R V+ L VV V G H++ L DG V+ WG N
Sbjct: 105 GTVWAWGDNPNGQLGEGT-TTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGAN 163
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG E + +P V + V + AG SHS+AL DGTV+AWG+ ++ G +G
Sbjct: 164 ASGQLG-EGTTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGA--NASGQLGD 220
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
+ P+++ +SG+V + +G+ + + + + G + G GQLG +T RS
Sbjct: 221 GTTTKRLVPVQV--LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRS--- 275
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS----SKGSILAFGLNNYSQLGEADSE 270
P++ + +V + +S S G++ A+G N+Y Q GE +
Sbjct: 276 -------------TPVQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTS 322
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
N F P + LS +A+G HSLA+ S+G ++A+G + G+LG S
Sbjct: 323 -----NRAF--PVQARGLSGG--VAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSN 373
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL----- 385
+EP + L + +++ G S AI S+G ++ WG QLG+G D L
Sbjct: 374 R-SEPVQVQGLSG--VVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQV 430
Query: 386 -------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
++G ++ +G + YG+LG S V P + L +
Sbjct: 431 QGLSGVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLG-TFTSLFVLVPVQVTGLSG--VV 487
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
++A GN S A+ S+G ++ G + QLG+G + P+++ G V+ VA+G
Sbjct: 488 AVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTGLS----GVVSVAAGD 543
Query: 487 QHSVIL 492
HS+ +
Sbjct: 544 SHSLAV 549
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 211/461 (45%), Gaps = 59/461 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G R T V L VV G +H++ L DG V+ WG N
Sbjct: 5 GTVWAAGNNGSGQLGDGTR-DNRSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAWGYN 63
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + G S P V V + AG HS+A+ +DGTV+AWG + +G +G
Sbjct: 64 GYGQLGNGSLG-SRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVWAWGD--NPNGQLGE 120
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P++++ +S +V + +G+ H + L S G + G GQLG T
Sbjct: 121 GTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTT------- 173
Query: 217 RRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
+ L P VP L + V G ++ + S G++ A+G N QLG+ +
Sbjct: 174 ---TNRLVP--VPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTT----- 223
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T L+ + +G +SLA+ ++G ++A+G + G+LG V+ +
Sbjct: 224 ------TKRLVPVQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVT---SR 274
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
TP+ L + ++A G+ +S A+ S+G ++ WG + Q G G +
Sbjct: 275 STPVQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLS 334
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ S+G ++A+G + G+LG S +EP + L + +++
Sbjct: 335 GGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNR-SEPVQVQGLSG--VVAVSA 391
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G S AI S+G ++ WG QLG+G D L P++++G
Sbjct: 392 GASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQG 432
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 205/455 (45%), Gaps = 70/455 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG V R T V L VV V G ++ L DG V+ WG N
Sbjct: 253 GTVWAWGYNFSGQLG-DDTVTSRSTPVQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSN 311
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G G + F Q L V ++AG +HS+A+ DGTV+AWGS ++ G +G
Sbjct: 312 DYGQRGEGTTSNRAFPVQARGL-SGGVAVAAGYAHSLAVRSDGTVWAWGS--NASGQLGE 368
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
+ P++++ +SG+V +++GA + + S G + G GQLG T R
Sbjct: 369 GTTSNRSEPVQVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDR---- 424
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS----SKGSILAFGLNNYSQLGEADSE 270
VP++ + + V V T S + G++ +G N Y QLG S
Sbjct: 425 ------------LVPVQVQGLSGVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGTFTS- 471
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKN 327
P + LS +A+G HSLA+ S+G ++A GR+D G+LG N
Sbjct: 472 ------LFVLVPVQVTGLS--GVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTN 523
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE------ 381
S PV + T + + S+A G+ S A+ +G ++ WG + QLG+G
Sbjct: 524 RSAPV-QVTGLSG-----VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAP 577
Query: 382 ------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
+ +G ++A+G + YG+LG S + P+ Q +
Sbjct: 578 VQVTGLSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSS--NQLVPVQVQQLR 635
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ ++ G+ S A+ S+G ++ WG + QLGNG
Sbjct: 636 GVVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 66/495 (13%)
Query: 6 KKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALV 65
++++ Q + S+ V VT+ + +L ++ G V G +GQLG G R V
Sbjct: 125 RRLVPVQVQGLSEVVAVTAGSSHSLALRSDG-TVWAWGANASGQLGEGT-TTNRLVPVPV 182
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQI 125
L VV V G H++ L DG V+ WG N G LG + +P V + V +
Sbjct: 183 LGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLG-DGTTTKRLVP--VQVLSGVVAM 239
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFV 185
AG +S+A+ DGTV+AWG + G +G + TP+++ +S +V +A+G+ +
Sbjct: 240 EAGSGYSLAVRNDGTVWAWG--YNFSGQLGDDTVTSRSTPVQVLGLSEVVAVAAGSSLSL 297
Query: 186 MLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
L S G + G + GQ G T A RG+S G V + + ++
Sbjct: 298 ALRSDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLS----GGVAVAAGY-------AHS 346
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ S G++ A+G N QLGE + + P ++ LS +++G SL
Sbjct: 347 LAVRSDGTVWAWGSNASGQLGEGTTSNRSE-------PVQVQGLS--GVVAVSAGASSSL 397
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
A+ S+G ++A+G + G+LG ++ + P + L + ++ G S A+ ++G
Sbjct: 398 AIRSDGTVWAWGSNASGQLGDGTTTDRLV-PVQVQGLSG--VVAVVAGTSFSLAVRNDGT 454
Query: 365 LYGWGMGNGY-QLGNGKEDDIL------------------------NSEGKIYAFGRHDY 399
++GWG NGY QLG +L S+G ++A GR+D
Sbjct: 455 VWGWGY-NGYGQLGTFTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDN 513
Query: 400 GRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G+LG N S PV + T + + S+A G+ S A+ +G ++ WG + QLG
Sbjct: 514 GQLGDGSWTNRSAPV-QVTGLSG-----VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLG 567
Query: 457 NGKEDDILEPMKIEG 471
+G P+++ G
Sbjct: 568 DGSWFQRSAPVQVTG 582
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ +G ++A G + G+LG TP+ L + + A G+ S A+ ++G +
Sbjct: 1 MRPDGTVWAAGNNGSGQLGDGTRDN---RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTV 57
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ WG QLGNG EP++++G
Sbjct: 58 WAWGYNGYGQLGNGSLGSRAEPVQVQG 84
>gi|190344431|gb|EDK36104.2| hypothetical protein PGUG_00202 [Meyerozyma guilliermondii ATCC
6260]
Length = 437
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 187/387 (48%), Gaps = 65/387 (16%)
Query: 49 QLGLGPDVMERKT-------FALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEG 99
+LGLGP ++ + E L N +V+ GGMHT+ L G V++WG ND G
Sbjct: 3 ELGLGPAASTKEVKRPRLNPYLTKEKLGNESIVDFAAGGMHTLVLDSAGNVWSWGGNDGG 62
Query: 100 ALGREAEGD---------------------SEFIPQTVN-LP----KKAVQISAGDSHSV 133
LGR+ G +E P V LP K VQ++A D+ S
Sbjct: 63 VLGRDTSGAEVLKDLDNASDSDDEDGDLNVAESTPGKVEGLPPIADAKIVQLAATDNLSA 122
Query: 134 ALLEDGTVYAWGSFRDSHGSMG-LKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
L +G VYAWGSFR + G +G L+ E IQ++P+K+ + IV++A G DH + L S+G
Sbjct: 123 LLYSNGDVYAWGSFRCNEGILGFLRDEIKIQRSPMKITGLKNIVQLAPGKDHLLALDSKG 182
Query: 192 NLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISS 249
+ G +Q QLGR I +R + LEP + L +I + +G ++ F I
Sbjct: 183 IVYAWGNGQQYQLGRKILERHRYKT-------LEPHAMALT--NIKYIASGDFHCFAIDH 233
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ +GLN + Q G + + + P +I+ LS+ +A+G+HHS+AL +
Sbjct: 234 DDRVYTWGLNQFGQCGFTNENGELEDGSLVSKPTVIEKLSNLNIQEIAAGEHHSMALTAS 293
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPS-LQ-------DKTITSIACG 352
G +Y +GR+D +G+ P + P+P+ LQ ++ CG
Sbjct: 294 GDVYTWGRYDMKEVGIPQDKLPESTFKDAHGKVRAVPVPTKLQVGAKGENGVKFKTVGCG 353
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ SF++ +G++Y WG + Y LG G
Sbjct: 354 SHHSFSVTDDGMVYAWGFADTYALGLG 380
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 138/332 (41%), Gaps = 88/332 (26%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IV A+G H ++L S GN+ + G + G LGR T
Sbjct: 34 IVDFAAGGMHTLVLDSAGNVWSWGGNDGGVLGRDTS------------------------ 69
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL---SD 290
G+ + L+N S + D ++ N TP ++ L +D
Sbjct: 70 -----------------GAEVLKDLDNASDSDDEDGDL----NVAESTPGKVEGLPPIAD 108
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG-LKNVSEPVTEPTPIPSLQDKTIT 347
K LA+ + S L S G +YA+G R + G LG L++ + P I L K I
Sbjct: 109 AKIVQLAATDNLSALLYSNGDVYAWGSFRCNEGILGFLRDEIKIQRSPMKITGL--KNIV 166
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+A G A+DS+G++Y WG G YQLG KI RH Y L
Sbjct: 167 QLAPGKDHLLALDSKGIVYAWGNGQQYQLGR-----------KI--LERHRYKTL----- 208
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDD- 462
EP ++ I IA G+ FAID + +Y WG+ Q G NG+ +D
Sbjct: 209 -----EPH---AMALTNIKYIASGDFHCFAIDHDDRVYTWGLNQFGQCGFTNENGELEDG 260
Query: 463 --ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ +P IE +L+N + ++A+G HS+ L
Sbjct: 261 SLVSKPTVIE--KLSNLNIQEIAAGEHHSMAL 290
>gi|45198474|ref|NP_985503.1| AFL045Cp [Ashbya gossypii ATCC 10895]
gi|44984425|gb|AAS53327.1| AFL045Cp [Ashbya gossypii ATCC 10895]
gi|374108732|gb|AEY97638.1| FAFL045Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 188/395 (47%), Gaps = 69/395 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALVE-DLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP +V + L++ + +V VGGMH + L D V++
Sbjct: 53 IFVWGTGSMCELGLGPLAKNKEVKRPRLNPLLQREKAGIVSFAVGGMHCLALDSDNNVWS 112
Query: 93 WGCNDEGALGREAEGDSE--------------------------FIPQTVNLP---KKAV 123
WG ND GALGR+ G +E +P+ +LP +K V
Sbjct: 113 WGTNDSGALGRDTSGAAEQLRDMDAAESSDDEDGDLNELEATPTMLPRD-SLPLDTQKVV 171
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSG--IVKIAS 179
Q++A D+ S L E+G VYAWG+FR + G +G + I Q++P KL S SG IV++A
Sbjct: 172 QLAATDNLSCVLFENGDVYAWGTFRCNEGILGFYQDAIESQRSPWKLPSFSGSRIVQMAP 231
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR I +RS R L+P L + +
Sbjct: 232 GKDHILFLDEHGVVYAWGNGQQYQLGRKIMERSRLRT-------LDPRAFGL--DGVKYI 282
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G ++F ++ G + A+GLN + Q G ++ EV+ T L+ D K +A
Sbjct: 283 ASGENHSFALADDGRLFAWGLNQFGQCGISN-EVEDGAMVTVPTEVLLP--PDVKVESIA 339
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-------------VTEPTPIPSLQDK 344
+G+HHS+ L +G +Y FGR D +G+ P V PT + L
Sbjct: 340 AGEHHSIVLTQDGDLYTFGRLDMFEVGISAEDYPESTYKDVHGKARSVPVPTKLKGL--P 397
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+IA G+ S A+ G++Y WG G Y +G G
Sbjct: 398 KFKAIAAGSHHSLAVARNGIIYSWGFGETYAVGLG 432
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 111/311 (35%), Gaps = 85/311 (27%)
Query: 231 KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE----VQKSGNTCFF------ 280
KRKH+ Y + L++Y QL +DS V +G+ C
Sbjct: 20 KRKHLVSTLNKHYKSINK---------LDDYRQLYISDSRMDIFVWGTGSMCELGLGPLA 70
Query: 281 ------TPHLIKSLSDKK--FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK------ 326
P L L +K A G H LAL+S+ ++++G +D G LG
Sbjct: 71 KNKEVKRPRLNPLLQREKAGIVSFAVGGMHCLALDSDNNVWSWGTNDSGALGRDTSGAAE 130
Query: 327 ----------------NVSEPVTEPTPIPS----LQDKTITSIACGNCVSFAIDSEGVLY 366
+++E PT +P L + + +A + +S + G +Y
Sbjct: 131 QLRDMDAAESSDDEDGDLNELEATPTMLPRDSLPLDTQKVVQLAATDNLSCVLFENGDVY 190
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTI 425
WG R + G LG ++ E P +PS I
Sbjct: 191 AWGTF------------------------RCNEGILGFYQDAIESQRSPWKLPSFSGSRI 226
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY---TVLQV 482
+A G +D GV+Y WG G YQLG I+E ++ + V +
Sbjct: 227 VQMAPGKDHILFLDEHGVVYAWGNGQQYQLGR----KIMERSRLRTLDPRAFGLDGVKYI 282
Query: 483 ASGGQHSVILA 493
ASG HS LA
Sbjct: 283 ASGENHSFALA 293
>gi|449297034|gb|EMC93053.1| hypothetical protein BAUCODRAFT_76837 [Baudoinia compniacensis UAMH
10762]
Length = 510
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 179/403 (44%), Gaps = 63/403 (15%)
Query: 39 VLTCGQGDTGQLGLGP-----DVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G+G G+LGLG DV R L D VV++ GGMH V LT D K+ T
Sbjct: 79 IYVFGEGTAGELGLGTAKNAIDVKRPRLNPNLAADKVGVVQLSAGGMHVVALTHDNKILT 138
Query: 93 WGCNDEGALGREAE--------------------------------GDSEFIPQTVNLPK 120
WG ND+GALGR+ G+ +F +
Sbjct: 139 WGVNDQGALGRDTTWEGGLKDMDAADDDDDDDDEDDNGLNPKESTPGEVDFSTSDIADGT 198
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVKIAS 179
+ VQ+ AGDS S AL +DG VY WG+FR + G G I P+ + + I IA+
Sbjct: 199 RWVQVVAGDSCSFALTDDGFVYGWGTFRGNEGIFGFNPTTITANRPVLVPELKKITHIAA 258
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
GA+H + L S G + G +Q QLGR R R G+ E G + I +
Sbjct: 259 GANHALALASNGAVFAWGSGQQNQLGR---RVVERTKTEGLKPREFGLPKGAKNGIVAIE 315
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
TG Y++F I G++ A+GLNNY + G D+ + P +I++L KK +
Sbjct: 316 TGSYHSFAIDKAGNVHAWGLNNYGETGIPDN--AGADEAFVLKPRIIEALQGKKVISIKG 373
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLG-----LKNVSEPVTE------------PTPIPSL 341
G HHSL +G +GR D G++G +K + E + PT + ++
Sbjct: 374 GGHHSLCATEDGDCLIWGRIDGGQIGISEDTIKAMPEDKVKSDESGRPRILLVPTKVSAI 433
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ ++ + + + I EG + WG YQ G G +D+
Sbjct: 434 EG-AVSHVTTSSDHNIVITKEGRAWSWGFSANYQTGQGTTEDV 475
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 150/395 (37%), Gaps = 83/395 (21%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT--------------QRSASRNARR 218
G+V++++G H V LT +LT G +QG LGR T
Sbjct: 116 GVVQLSAGGMHVVALTHDNKILTWGVNDQGALGRDTTWEGGLKDMDAADDDDDDDDEDDN 175
Query: 219 GMSFLE--PGEVPLKRKHIDD------VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
G++ E PGEV I D V G +F ++ G + +G ++ +
Sbjct: 176 GLNPKESTPGEVDFSTSDIADGTRWVQVVAGDSCSFALTDDGFVYGWGTFRGNEGIFGFN 235
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ N P L KK T +A+G +H+LAL S G ++A+G +LG + V
Sbjct: 236 PTTITANRPVLVPEL------KKITHIAAGANHALALASNGAVFAWGSGQQNQLGRRVVE 289
Query: 330 EPVTEPTP-----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKE 381
TE +P I +I G+ SFAID G ++ WG+ N + G N
Sbjct: 290 RTKTEGLKPREFGLPKGAKNGIVAIETGSYHSFAIDKAGNVHAWGLNNYGETGIPDNAGA 349
Query: 382 DDIL----------------------------NSEGKIYAFGRHDYGRLGL-----KNVS 408
D+ +G +GR D G++G+ K +
Sbjct: 350 DEAFVLKPRIIEALQGKKVISIKGGGHHSLCATEDGDCLIWGRIDGGQIGISEDTIKAMP 409
Query: 409 EPVTE------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
E + PT + +++ ++ + + + I EG + WG YQ G
Sbjct: 410 EDKVKSDESGRPRILLVPTKVSAIEG-AVSHVTTSSDHNIVITKEGRAWSWGFSANYQTG 468
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
G +D+ I+ + + +GGQ ++
Sbjct: 469 QGTTEDVEVATLIDNTAVREQKLNFATAGGQFGIV 503
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 90/253 (35%), Gaps = 70/253 (27%)
Query: 282 PHLIKSLSDKKF--TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE--------- 330
P L +L+ K L++G H +AL + KI +G +D G LG E
Sbjct: 104 PRLNPNLAADKVGVVQLSAGGMHVVALTHDNKILTWGVNDQGALGRDTTWEGGLKDMDAA 163
Query: 331 --------------PVTEPTP------IPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWG 369
E TP + D T + G+ SFA+ +G +YGWG
Sbjct: 164 DDDDDDDDEDDNGLNPKESTPGEVDFSTSDIADGTRWVQVVAGDSCSFALTDDGFVYGWG 223
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G + G G + P +P L K IT IA
Sbjct: 224 TFRGNE------------------------GIFGFNPTTITANRPVLVPEL--KKITHIA 257
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY--------TVLQ 481
G + A+ S G ++ WG G QLG ++E K EG + + ++
Sbjct: 258 AGANHALALASNGAVFAWGSGQQNQLGR----RVVERTKTEGLKPREFGLPKGAKNGIVA 313
Query: 482 VASGGQHSVILAK 494
+ +G HS + K
Sbjct: 314 IETGSYHSFAIDK 326
>gi|403353979|gb|EJY76535.1| hypothetical protein OXYTRI_01950 [Oxytricha trifallax]
Length = 761
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 170/306 (55%), Gaps = 37/306 (12%)
Query: 38 VVLTCGQGDTGQLGLGPDV-MERKTFALVEDLD-------NVVEVVVGGMHTVCLTEDGK 89
+V G G+ QLGLG D E K + D ++++V GGMHTV L+ G+
Sbjct: 3 LVYVFGSGECEQLGLGDDQPFEIKKPRRIPMFDMGGLVGNKILKIVCGGMHTVALSSAGR 62
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLED-GTVYAWGSF 147
VYTWGCNDEGALGR + ++ + T+ +P I+AGD H+VA ++ V+ WG +
Sbjct: 63 VYTWGCNDEGALGRPGQENTPIEVADTMKIP--ITDITAGDCHTVAYNQNLNQVFLWGLY 120
Query: 148 RDSHGSMGLKGEGIQKTPLKL-------ESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
R++ G E + K P ++ ++ + I KI SG+ H + LT+ G + G PE
Sbjct: 121 RNA--MTGRTYEPV-KEPTRIGQELFNKQTKNFIQKIKSGSHHTLALTTDGEVYGWGDPE 177
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
G++GR+ + +RN +E + K + DVF G +++F ++ KG + ++GLN
Sbjct: 178 SGKIGRMLK---TRNKNEQALRIE----KIHAKKVRDVFCGNHHSFYVNDKGQVYSWGLN 230
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
N+ QLG E NT TP I L ++ +++A G+HHS+A+ +EGK+Y +GR+D
Sbjct: 231 NHGQLGIGHKE-----NTA--TPTHIPELDNQHVSVIAGGEHHSIAVTAEGKVYCWGRND 283
Query: 320 YGRLGL 325
+ GL
Sbjct: 284 ESQCGL 289
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 46/289 (15%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I+KI G H V L+S G + T GC ++G LGR Q + + + ++P+
Sbjct: 44 ILKIVCGGMHTVALSSAGRVYTWGCNDEGALGRPGQENTP------IEVADTMKIPITDI 97
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
D T YN ++ + +GL + G V++ L +
Sbjct: 98 TAGDCHTVAYNQNLNQ---VFLWGLYRNAMTGRTYEPVKEP---TRIGQELFNKQTKNFI 151
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLG----LKNVSEPVTEPTPIPSLQDKTITSI 349
+ SG HH+LAL ++G++Y +G + G++G +N +E I + K + +
Sbjct: 152 QKIKSGSHHTLALTTDGEVYGWGDPESGKIGRMLKTRNKNEQALR---IEKIHAKKVRDV 208
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
CGN SF + N +G++Y++G +++G+LG+ +
Sbjct: 209 FCGNHHSFYV--------------------------NDKGQVYSWGLNNHGQLGIGHKEN 242
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
T PT IP L ++ ++ IA G S A+ +EG +Y WG + Q G G
Sbjct: 243 TAT-PTHIPELDNQHVSVIAGGEHHSIAVTAEGKVYCWGRNDESQCGLG 290
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIA 178
K ++I G H+VAL G VY WG + G++G G+ + TP+++ I I
Sbjct: 43 KILKIVCGGMHTVALSSAGRVYTWGC--NDEGALGRPGQ--ENTPIEVADTMKIPITDIT 98
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK------- 231
+G H V L ++ RNA G ++ EP + P +
Sbjct: 99 AGDCHTVAYNQN-------------LNQVFLWGLYRNAMTGRTY-EPVKEPTRIGQELFN 144
Query: 232 ---RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
+ I + +G ++T +++ G + +G ++G K+ I+
Sbjct: 145 KQTKNFIQKIKSGSHHTLALTTDGEVYGWGDPESGKIGRMLKTRNKNEQAL-----RIEK 199
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+ KK + G HHS +N +G++Y++G +++G+LG+ + T PT IP L ++ ++
Sbjct: 200 IHAKKVRDVFCGNHHSFYVNDKGQVYSWGLNNHGQLGIGHKENTAT-PTHIPELDNQHVS 258
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
IA G S A+ +EG +Y WG + Q G G
Sbjct: 259 VIAGGEHHSIAVTAEGKVYCWGRNDESQCGLG 290
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 53/280 (18%)
Query: 253 ILAFGLNNYSQLGEADS---EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ FG QLG D E++K F + L K + G H++AL+S
Sbjct: 4 VYVFGSGECEQLGLGDDQPFEIKKPRRIPMFD---MGGLVGNKILKIVCGGMHTVALSSA 60
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPI--PSLQDKTITSIACGNCVSFAIDSE-GVLY 366
G++Y +G +D G LG P E TPI IT I G+C + A + ++
Sbjct: 61 GRVYTWGCNDEGALG-----RPGQENTPIEVADTMKIPITDITAGDCHTVAYNQNLNQVF 115
Query: 367 GWGMGN-----------------GYQLGNGKEDDI-------------LNSEGKIYAFGR 396
WG+ G +L N + + L ++G++Y +G
Sbjct: 116 LWGLYRNAMTGRTYEPVKEPTRIGQELFNKQTKNFIQKIKSGSHHTLALTTDGEVYGWGD 175
Query: 397 HDYGRLG----LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+ G++G +N +E I + K + + CGN SF ++ +G +Y WG+ N
Sbjct: 176 PESGKIGRMLKTRNKNEQALR---IEKIHAKKVRDVFCGNHHSFYVNDKGQVYSWGLNNH 232
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG G +++ P I +L+N V +A G HS+ +
Sbjct: 233 GQLGIGHKENTATPTHIP--ELDNQHVSVIAGGEHHSIAV 270
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 418 PSLQDKTITSIACGN-CVSFAIDSE---GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P+ Q K A GN C + + E LY WGMG Y LG E++ P K+ K
Sbjct: 432 PAKQIKISNVFASGNYCYALQVADELKSNQLYSWGMGGSYVLGTRDEENEHRPYKVHPKM 491
Query: 474 LNNYTVLQVASGGQHSVILA 493
+ V+ + G QH V+L+
Sbjct: 492 FEEFPVVDMGLGTQHVVVLS 511
>gi|195156597|ref|XP_002019186.1| GL26225 [Drosophila persimilis]
gi|194115339|gb|EDW37382.1| GL26225 [Drosophila persimilis]
Length = 361
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 172/337 (51%), Gaps = 54/337 (16%)
Query: 52 LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE---AEGD 108
L D +R T ++++ + V+V GG H++ LT+ G VY++GCN EGALGR +E
Sbjct: 26 LACDTSDRLTE--IQNIPDPVDVCAGGQHSLVLTQSGDVYSFGCNGEGALGRSTSSSEPG 83
Query: 109 SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL 168
SE +P V+LP KA+ I+AG SHS LL +G+VYAWGSFR L +GI P ++
Sbjct: 84 SESLPALVDLPGKALCITAGGSHSACLLANGSVYAWGSFR-------LTIDGIALKPTQI 136
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
+ + IASG +H V+L++RG + T GC E QL I +RS L P ++
Sbjct: 137 LAGTECCSIASGRNHLVVLSTRGKVYTMGCAEHRQLRSIPERSV----------LRPNQI 186
Query: 229 PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG--NTC-FFTPHLI 285
++ + F ++ T N L E+ +E + N C F P I
Sbjct: 187 NIRSA---NPFNAIWAT-------------NTCCFLRESQTETIWAADLNNCQHFAP--I 228
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
K+ + K T +A G H+L L G + G +E V++ P+ +L+
Sbjct: 229 KT-TLKDVTQIAGGDQHTLMLQGNRLFSVVGLGESG-------TEIVSQLAPVRNLECSN 280
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
I S+ACG+ S+AI +G+LY WG + GK+D
Sbjct: 281 IVSVACGDVWSYAITEDGLLYSWGTDSSKA---GKDD 314
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 155/340 (45%), Gaps = 37/340 (10%)
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
+++++ V + +G H ++LT G++ + GC +G LGR T S+S + P
Sbjct: 36 EIQNIPDPVDVCAGGQHSLVLTQSGDVYSFGCNGEGALGRST--SSSEPGSESL----PA 89
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
V L K + G ++ + + GS+ A+G + G A Q
Sbjct: 90 LVDLPGKALCITAGGSHSACLLANGSVYAWGSFRLTIDGIALKPTQI------------- 136
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKT 345
L+ + +ASG++H + L++ GK+Y G ++ +L +++ E V P I
Sbjct: 137 -LAGTECCSIASGRNHLVVLSTRGKVYTMGCAEHRQL--RSIPERSVLRPNQINIRSANP 193
Query: 346 ITSIACGNCVSFAIDSEG-VLYGWGMGNGYQLGNGKE--DDILNSEG----KIYAFGRHD 398
+I N F +S+ ++ + N K D+ G + G
Sbjct: 194 FNAIWATNTCCFLRESQTETIWAADLNNCQHFAPIKTTLKDVTQIAGGDQHTLMLQGNRL 253
Query: 399 YGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ +GL ++ +E V++ P+ +L+ I S+ACG+ S+AI +G+LY WG +
Sbjct: 254 FSVVGLGESGTEIVSQLAPVRNLECSNIVSVACGDVWSYAITEDGLLYSWGTDSSKA--- 310
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
GK+D +P ++ + N +L V++ +H++ LA+ P
Sbjct: 311 GKDD---KPTRVISRNTANKKILLVSATARHALFLAQFNP 347
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 221/487 (45%), Gaps = 73/487 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + ++T + L +V +V G H++ + DG V+ WG N
Sbjct: 269 GTVWAWGHNAYGQLGDGTNT--QRTQPVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDN 326
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA-----VQISAGDSHSVALLEDGTVYAWGSFRDSH 151
LG G+ P LP +A V + AG HSVAL DGT ++WG +
Sbjct: 327 RYRQLG---TGNLTSSP----LPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGD--NVF 377
Query: 152 GSMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G + P+++ ++ G SG H VML + G L G +QGQLG TQ+
Sbjct: 378 GQLGDTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQ 437
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
+S +P+ + V +G +T + S G++ +G+N + QLGE
Sbjct: 438 DSSL------------PLPVNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGE--- 482
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
T P ++ + T +A+G +HSLAL S G ++A+G + YG+LG
Sbjct: 483 ------GTVTDRPTPVQVVGLGGVTAIATGDNHSLALRSNGTVWAWGFNRYGQLG---DG 533
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL---- 385
V P+ + I +IA G S A+ S+G ++ +G QLGNG L
Sbjct: 534 TAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTWTLVPVQ 593
Query: 386 --------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
++G ++A+G + G+LG+ ++ +P +P L I
Sbjct: 594 AVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGV-GTTQGSAQPLQVPGLSG--I 650
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
TSIA G+ S A+ S+G ++ WG QLGNG L P + G + + +G
Sbjct: 651 TSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAG 706
Query: 486 GQHSVIL 492
QHS+ +
Sbjct: 707 DQHSLAM 713
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 232/536 (43%), Gaps = 121/536 (22%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ++ + V L V V G +++ L DG V+ WG N
Sbjct: 69 GTVFAWGFNRLGQLGDGTS-RDKASPVQVAGLTQVTSVAAGDQYSLALDADGAVWAWGDN 127
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + S +PQ V+ V +++G +H +AL DGTV+AWG R++
Sbjct: 128 ASGQLG-DGTLTSRLLPQRVSALSNVVSLASGFAHVLALRADGTVWAWGDNRNNQ----- 181
Query: 157 KGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
G+G PL++ +SG+V + +G + L + G L G GQLG T
Sbjct: 182 LGDGTLTRSSVPLQVPGLSGVVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGT----- 236
Query: 214 RNARRGMSFLEPGEVPLKRKHID---DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
RR P++ +D V G Y+ + + G++ A+G N Y QLG+
Sbjct: 237 -TVRR--------ITPVQVASLDSVVSVSVGAYHALALRADGTVWAWGHNAYGQLGD--- 284
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
G T + SL+D + L +G +HSLA+ ++G ++A+G + Y +LG N++
Sbjct: 285 -----GTNTQRTQPVSVSLTDVR--TLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLT 337
Query: 330 EPVTEPTPI-------------------------------------------PSLQDKTI 346
+ P P+ P + +
Sbjct: 338 ---SSPLPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQV 394
Query: 347 TSIACGNCVSFA-------IDSEGVLYGWGMGNGYQLGNGKEDD---------------- 383
+ +A G + + + + G L+ WG QLGNG + D
Sbjct: 395 SGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTDVISVA 454
Query: 384 -------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
L S+G ++ +G + +G+LG V++ PTP+ + +T+IA G+ S
Sbjct: 455 SGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTD---RPTPVQVVGLGGVTAIATGDNHSL 511
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
A+ S G ++ WG QLG+G D +P++ G L+N ++ +A+GG HS+ L
Sbjct: 512 ALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQASG--LSN--IVAIAAGGSHSLAL 563
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 203/444 (45%), Gaps = 56/444 (12%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V + +G H++ + DG V+ WG N G LG D Q L + ++AGD +
Sbjct: 53 VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL-TQVTSVAAGDQY 111
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+AL DG V+AWG ++ G +G + P ++ ++S +V +ASG H + L + G
Sbjct: 112 SLALDADGAVWAWGD--NASGQLGDGTLTSRLLPQRVSALSNVVSLASGFAHVLALRADG 169
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
+ G QLG T +S P +VP + V G + + + G
Sbjct: 170 TVWAWGDNRNNQLGDGTLTRSS----------VPLQVPGLSGVVAVVAGGSSSLALRADG 219
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ A+G N Y QLG+ + V++ TP + SL ++ G +H+LAL ++G
Sbjct: 220 TLWAWGDNRYGQLGDG-TTVRR------ITPVQVASL--DSVVSVSVGAYHALALRADGT 270
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++A+G + YG+LG + T+P + SL D + ++ GN S A+ ++G ++ WG
Sbjct: 271 VWAWGHNAYGQLG-DGTNTQRTQPVSV-SLTD--VRTLVAGNYHSLAVRTDGAVWAWGDN 326
Query: 372 NGYQLGNG-----------------------KEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
QLG G + L ++G +++G + +G+LG
Sbjct: 327 RYRQLGTGNLTSSPLPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLG-DTTF 385
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
EP P + L + + G + + + G L+ WG QLGNG + D P+
Sbjct: 386 EPRMAPVQVSGLALGRADATS-GQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLP 444
Query: 469 IEGKQLNNYTVLQVASGGQHSVIL 492
+ N V+ VASG +H+ L
Sbjct: 445 V-----NLTDVISVASGYRHTAAL 463
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 185/403 (45%), Gaps = 61/403 (15%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ G +HTV L +G+++ WG N +G LG + DS +P VNL + +++G H
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSS-LPLPVNL-TDVISVASGYRH 459
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLT 188
+ AL DGTV+ WG R G GEG + TP+++ + G+ IA+G +H + L
Sbjct: 460 TAALRSDGTVWTWGMNR-----FGQLGEGTVTDRPTPVQVVGLGGVTAIATGDNHSLALR 514
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
S G + G GQLG T RR +P + + G ++ +
Sbjct: 515 SNGTVWAWGFNRYGQLGDGTAVD-----RR-----QPVQASGLSNIVAIAAGGSHSLALR 564
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G++ AFG N QLG T P ++++ LA+G +SLAL +
Sbjct: 565 SDGTVWAFGYNFDGQLGNGT-------RTWTLVP--VQAVGLSSVVSLAAGSLYSLALRA 615
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G ++A+G + G+LG+ ++ +P +P L ITSIA G+ S A+ S+G ++ W
Sbjct: 616 DGTVWAWGYNASGQLGV-GTTQGSAQPLQVPGLSG--ITSIAAGSYHSLALRSDGWVWAW 672
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G N EG++ S P P + + + +I
Sbjct: 673 G---------------FNFEGQLG------------NGTSTPRLSPGLVAGMSNAV--AI 703
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G+ S A+ ++G ++ WG+ QLG G + P++++G
Sbjct: 704 IAGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQVQG 746
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 163/347 (46%), Gaps = 35/347 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G + + L +L +V+ V G HT L DG V+TWG N
Sbjct: 418 GRLWAWGDNQQGQLGNG--TQQDSSLPLPVNLTDVISVASGYRHTAALRSDGTVWTWGMN 475
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D Q V L I+ GD+HS+AL +GTV+AWG R +G +G
Sbjct: 476 RFGQLGEGTVTDRPTPVQVVGL-GGVTAIATGDNHSLALRSNGTVWAWGFNR--YGQLGD 532
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
++ P++ +S IV IA+G H + L S G + G GQLG N
Sbjct: 533 GTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLG---------NG 583
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
R + VP++ + V + +Y+ + + G++ A+G N QLG ++
Sbjct: 584 TRTWTL-----VPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGS 638
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P + LS T +A+G +HSLAL S+G ++A+G + G+LG S P
Sbjct: 639 AQ-------PLQVPGLS--GITSIAAGSYHSLALRSDGWVWAWGFNFEGQLG-NGTSTPR 688
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
P + + + +I G+ S A+ ++G ++ WG+ QLG G
Sbjct: 689 LSPGLVAGMSNA--VAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTG 733
>gi|367005462|ref|XP_003687463.1| hypothetical protein TPHA_0J02090 [Tetrapisispora phaffii CBS 4417]
gi|357525767|emb|CCE65029.1| hypothetical protein TPHA_0J02090 [Tetrapisispora phaffii CBS 4417]
Length = 479
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 186/421 (44%), Gaps = 63/421 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA------L 64
K+A P + T + +L + G G +LGLG ++ L
Sbjct: 17 KKATKPKSHILNTQDDYKSLFLSVQPLDIFCWGSGSMCELGLGKLAKNKEVKRPRLNPFL 76
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--------------------- 103
D ++ GGMHT+ L + +++WGCND GALGR
Sbjct: 77 PRDEAKIISFTAGGMHTLALDSNNDIWSWGCNDVGALGRDTSDSKETLKDIDDVDSSDDD 136
Query: 104 -----EAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
EAE IP+ P K VQ++A D+ S AL +G VYAWG+FR + G +
Sbjct: 137 DGDLNEAESTPAKIPRESFPPLAEGHKIVQLAATDNLSAALFSNGEVYAWGTFRCNEGIL 196
Query: 155 GLKGEG--IQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G E IQ+TP K+ S IV++A G DH + L G + G +Q QLGR
Sbjct: 197 GFYQEDIKIQRTPWKVPKFSKYKIVQLAPGKDHILFLDEEGIVFAWGNGQQNQLGRKVLE 256
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
R + L+P P +HI + +G ++F I+ G ++++GLN + Q G ++S
Sbjct: 257 ------RYRLKTLDP--RPFGLRHIKFIASGENHSFAINKDGKLVSWGLNQFGQCGVSES 308
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
++ G P + +A+G+HHSL L +G +Y+FGR D +G+
Sbjct: 309 -IEDGG--MVDKPKKVLIPDGLSIKTIAAGEHHSLVLTQDGDLYSFGRLDMMEVGIAKDK 365
Query: 330 EP---------VTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
P P+P+ + +IA G+ S A+ G+ Y WG G Y +G
Sbjct: 366 LPEYVYKDEHGKARSIPLPTKLESVPKFKNIAAGSHHSLAVAKNGIAYSWGFGETYAVGL 425
Query: 379 G 379
G
Sbjct: 426 G 426
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 182/465 (39%), Gaps = 100/465 (21%)
Query: 109 SEFIPQTVNLPKKAVQISAGDSHSVAL-LEDGTVYAWGSFRDSHGSMGL----KGEGIQK 163
+E + + PK + + D S+ L ++ ++ WGS S +GL K + +++
Sbjct: 12 TEHVAKKATKPKSHILNTQDDYKSLFLSVQPLDIFCWGS--GSMCELGLGKLAKNKEVKR 69
Query: 164 ---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT------------ 208
P + I+ +G H + L S ++ + GC + G LGR T
Sbjct: 70 PRLNPFLPRDEAKIISFTAGGMHTLALDSNNDIWSWGCNDVGALGRDTSDSKETLKDIDD 129
Query: 209 --------------QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
+ + ++ R L G ++ D++ ++ S G +
Sbjct: 130 VDSSDDDDGDLNEAESTPAKIPRESFPPLAEGHKIVQLAATDNLSAALF-----SNGEVY 184
Query: 255 AFGLN--NYSQLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
A+G N LG + D ++Q+ TP + S K LA G+ H L L+ EG
Sbjct: 185 AWGTFRCNEGILGFYQEDIKIQR-------TPWKVPKFSKYKIVQLAPGKDHILFLDEEG 237
Query: 311 KIYAFG---RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
++A+G ++ GR L+ +P P + I IA G SFAI+ +G L
Sbjct: 238 IVFAWGNGQQNQLGRKVLERYRLKTLDPRPFGL---RHIKFIASGENHSFAINKDGKLVS 294
Query: 368 WGMGNGYQLGNGK--EDD----------------------------ILNSEGKIYAFGRH 397
WG+ Q G + ED +L +G +Y+FGR
Sbjct: 295 WGLNQFGQCGVSESIEDGGMVDKPKKVLIPDGLSIKTIAAGEHHSLVLTQDGDLYSFGRL 354
Query: 398 DYGRLGLKNVSEP---------VTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYG 446
D +G+ P P+P+ + +IA G+ S A+ G+ Y
Sbjct: 355 DMMEVGIAKDKLPEYVYKDEHGKARSIPLPTKLESVPKFKNIAAGSHHSLAVAKNGIAYS 414
Query: 447 WGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
WG G Y +G G +D+ P +I+ + ++ V GGQ S+
Sbjct: 415 WGFGETYAVGLGPAGEDVEVPTRIKNTATQEHNIVLVGCGGQFSI 459
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 107/295 (36%), Gaps = 61/295 (20%)
Query: 232 RKHIDDVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ HI + + F+S + I +G + +LG K P L + +
Sbjct: 23 KSHILNTQDDYKSLFLSVQPLDIFCWGSGSMCELGLGKLAKNKEVKRPRLNPFLPRD--E 80
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN----------------------V 328
K +G H+LAL+S I+++G +D G LG +
Sbjct: 81 AKIISFTAGGMHTLALDSNNDIWSWGCNDVGALGRDTSDSKETLKDIDDVDSSDDDDGDL 140
Query: 329 SEPVTEPTPIPS------LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+E + P IP + I +A + +S A+ S G +Y WG ++ G
Sbjct: 141 NEAESTPAKIPRESFPPLAEGHKIVQLAATDNLSAALFSNGEVYAWGT---FRCNEG--- 194
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
I F + D + P +P I +A G +D EG
Sbjct: 195 --------ILGFYQEDI---------KIQRTPWKVPKFSKYKIVQLAPGKDHILFLDEEG 237
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ---VASGGQHSVILAK 494
+++ WG G QLG +LE +++ + + +ASG HS + K
Sbjct: 238 IVFAWGNGQQNQLGR----KVLERYRLKTLDPRPFGLRHIKFIASGENHSFAINK 288
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 281 TPHLIKSLSDKKFTML-ASGQHHSLALNSEG-KIYAFGRHDYGRLGL------KNVSEPV 332
T H+ K + K +L + SL L+ + I+ +G LGL K V P
Sbjct: 12 TEHVAKKATKPKSHILNTQDDYKSLFLSVQPLDIFCWGSGSMCELGLGKLAKNKEVKRPR 71
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
P +P + K I S G + A+DS ++ WG + LG D +S+ +
Sbjct: 72 LNPF-LPRDEAKII-SFTAGGMHTLALDSNNDIWSWGCNDVGALGR----DTSDSKETLK 125
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPS------LQDKTITSIACGNCVSFAIDSEGVLYG 446
D +++E + P IP + I +A + +S A+ S G +Y
Sbjct: 126 DIDDVDSSDDDDGDLNEAESTPAKIPRESFPPLAEGHKIVQLAATDNLSAALFSNGEVYA 185
Query: 447 WGM--GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG N LG +ED ++ + + + Y ++Q+A G H + L
Sbjct: 186 WGTFRCNEGILGFYQEDIKIQRTPWKVPKFSKYKIVQLAPGKDHILFL 233
>gi|358372284|dbj|GAA88888.1| pheromone response protein [Aspergillus kawachii IFO 4308]
Length = 657
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 191/406 (47%), Gaps = 85/406 (20%)
Query: 48 GQLGLGPDVMERKTFA-------LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGA 100
G+LGLG D ++ L D VV++ +GG+H+ LT D K+ TWG NDEG
Sbjct: 98 GELGLG-DATKKSEIPGPVLNPKLPADSVGVVQLAIGGVHSAALTHDNKILTWGVNDEGT 156
Query: 101 LGR--------EAEGD-------------------------SEFIPQTVN---LPKKAV- 123
LGR E GD E P V+ P+ V
Sbjct: 157 LGRDTKEERKVEENGDGVNGDEAKEESDSDSDDDDEVDLNMKEATPTAVDSALFPEGTVF 216
Query: 124 -QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGA 181
QI+A DS + AL ++G VY WG+FR S+G +G E IQ+ P+ + + + ++ASGA
Sbjct: 217 TQITATDSATFALTQEGRVYGWGTFRGSNGVIGFSPETKIQRQPVLVPGLEKVTQLASGA 276
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H + LT++G +LT GC EQ QLG RI+ R + + L PG+ L + + T
Sbjct: 277 QHVLALTAKGAVLTWGCEEQNQLGRRISGRLHGK-----LESLIPGQCALP-SDVVSIGT 330
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQL------GEADSEVQKSGNTCFFTPHLIKSLSD-KK 292
G Y++F + G + A+G NN+ Q GE+D+ V P +KS K
Sbjct: 331 GSYHSFAVRKNGRVHAWGSNNFGQTAVPMSAGESDAVV--------LYPTEVKSFRKHSK 382
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPI 338
+ G+ HS+A+ +GK ++GR D LG+ P +T PTP+
Sbjct: 383 IVSICGGKDHSVAVTEDGKCLSWGRVDNKALGIPLADMPEEELVHDEHGRPRILTVPTPL 442
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++++ + + A + SFAI +G Y WG Q G+ D++
Sbjct: 443 TDIKEEVVFATASSDH-SFAITKDGQAYSWGFNVQRQAGHRDVDEV 487
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 44 QGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
+G G +G P+ ++ LV L+ V ++ G H + LT G V TWGC ++ LGR
Sbjct: 242 RGSNGVIGFSPETKIQRQPVLVPGLEKVTQLASGAQHVLALTAKGAVLTWGCEEQNQLGR 301
Query: 104 EAEGD-----SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-- 156
G IP LP V I G HS A+ ++G V+AWGS ++ +
Sbjct: 302 RISGRLHGKLESLIPGQCALPSDVVSIGTGSYHSFAVRKNGRVHAWGSNNFGQTAVPMSA 361
Query: 157 -KGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ + + P +++S S IV I G DH V +T G L+ G + LG
Sbjct: 362 GESDAVVLYPTEVKSFRKHSKIVSICGGKDHSVAVTEDGKCLSWGRVDNKALG 414
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 114/343 (33%), Gaps = 72/343 (20%)
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
N + P+ R S G + P V K+K V N + +
Sbjct: 31 ANTSASAKPQASSRKRKAADSVEETTTSGAAPAAPARVTKKQKEA----LAVINHAPTQR 86
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ FG N Y +LG D+ + P L LA G HS AL +
Sbjct: 87 LDVYVFGTNCYGELGLGDATKKSEIPGPVLNPKL--PADSVGVVQLAIGGVHSAALTHDN 144
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTE---------------------------------PTP 337
KI +G +D G LG E E PT
Sbjct: 145 KILTWGVNDEGTLGRDTKEERKVEENGDGVNGDEAKEESDSDSDDDDEVDLNMKEATPTA 204
Query: 338 IPSL---QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
+ S + T I + +FA+ EG +YGWG G
Sbjct: 205 VDSALFPEGTVFTQITATDSATFALTQEGRVYGWGTFRGSN------------------- 245
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
G +G ++ +P +P L+ +T +A G A+ ++G + WG Q
Sbjct: 246 -----GVIGFSPETKIQRQPVLVPGLEK--VTQLASGAQHVLALTAKGAVLTWGCEEQNQ 298
Query: 455 LG---NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
LG +G+ LE + I G+ V+ + +G HS + K
Sbjct: 299 LGRRISGRLHGKLESL-IPGQCALPSDVVSIGTGSYHSFAVRK 340
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 182/371 (49%), Gaps = 39/371 (10%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGK-VYT 92
G +V + G+G+ GQLG G D ER +V LD+ + V G HT L+ K VY+
Sbjct: 32 GDLVCSWGRGEDGQLGHG-DAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYS 90
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D G LG D FIPQ + K + QI+ GDSH +A+ DG V WG R+
Sbjct: 91 WGWGDFGRLGHGNSSDL-FIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWG--RNQ 147
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +GL TP KL + G+ +A+GA+H +T G L G G LG
Sbjct: 148 NGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGL-- 205
Query: 209 QRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
R R L P +V + + + V G +T ++ G++ FG + Y QLG
Sbjct: 206 ---GDREDR-----LVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGH 257
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
D PH +++L KK + G H+ AL+S+G++Y +G + +G++G
Sbjct: 258 GDFADH-------LIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG 310
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------- 379
N +E + P + LQD+ +T + CG + A+ G +Y WG G QLG+G
Sbjct: 311 N-TEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRST 369
Query: 380 -KEDDILNSEG 389
K +IL+S+G
Sbjct: 370 PKRIEILSSDG 380
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 170/395 (43%), Gaps = 46/395 (11%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
++ + +SAG SHSVALL V +WG D G E T + I +
Sbjct: 14 RQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTC 73
Query: 180 GADHFVMLT-SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
GADH L+ S + + G + G+LG + F+ LK + +
Sbjct: 74 GADHTTALSNSTKTVYSWGWGDFGRLG---------HGNSSDLFIPQPIKALKGLEVKQI 124
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G + I++ G +L +G N QLG +E TPH + + MLA
Sbjct: 125 ACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTED-------VLTPHKLTAFEGVAVKMLA 177
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G H+ A+ GK+Y +G YG LGL + + + P + ++ + + +ACG +
Sbjct: 178 AGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLV-PDQVAAVAGELMKMVACGWRHTI 236
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKI 391
+ G +Y +G QLG+G D L+S+G++
Sbjct: 237 CVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRL 296
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
Y +G + +G++G N +E + P + LQD+ +T + CG + A+ G +Y WG G
Sbjct: 297 YGWGWNKFGQVGCGN-TEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGT 355
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
QLG+G D P +IE + + Q+ S G
Sbjct: 356 SGQLGHGDTVDRSTPKRIEILSSDGFACEQIESSG 390
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 159/347 (45%), Gaps = 33/347 (9%)
Query: 22 VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGM 79
VT A T V + G GD G+LG G D+ + ++ L+ V ++ G
Sbjct: 71 VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLE-VKQIACGDS 129
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLED 138
H + +T DG+V WG N G LG D + AV+ ++AG H+ A+ E+
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTEN 189
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTA 196
G +Y WG R +G++GL + P ++ +V+G + +A G H + + GN+ T
Sbjct: 190 GKLYGWGWGR--YGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTF 247
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSIL 254
G + GQLG L P +V LK K I + G +TF + S G +
Sbjct: 248 GWSKYGQLGH----------GDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLY 297
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G N + Q+G ++E Q S P L+K L D+ T++ G H+LA+ G +Y+
Sbjct: 298 GWGWNKFGQVGCGNTEDQSS-------PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYS 350
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQD-----KTITSIACGNCVS 356
+GR G+LG + + T P I L + I S NC S
Sbjct: 351 WGRGTSGQLGHGDTVDRST-PKRIEILSSDGFACEQIESSGSSNCTS 396
>gi|365765541|gb|EHN07048.1| Srm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 482
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 181/398 (45%), Gaps = 64/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPQAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +GJ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGJPKDNLPEYXYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDD 383
S+A G+ S A+ G+ Y WG G Y +G G EDD
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 434
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 165/430 (38%), Gaps = 95/430 (22%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK----------TPLKLESVSGIVKIASGADHFVMLTSR 190
++ WG+ GSM G G Q P + I+ A G H + L
Sbjct: 48 IFCWGT-----GSMCELGLGPQAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEE 102
Query: 191 GNLLTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK------ 231
N+ + GC + G LGR T + + + ++ LE P ++P +
Sbjct: 103 SNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA 162
Query: 232 --RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLI 285
K + T + + S G + A+G ++ LG + ++QK TP +
Sbjct: 163 EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKV 215
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQ 342
+ S LA G+ H L L+ EG ++A+G +LG K + +P P
Sbjct: 216 PTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL-- 273
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------- 383
+ + IA G FA+ + L WG+ Q G ++ +
Sbjct: 274 -RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVI 332
Query: 384 -----------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDK 423
IL+ +G +Y+ GR D +GJ + P P+P+ +
Sbjct: 333 RSIAAGEHHSLILSQDGDLYSCGRLDMFEVGJPKDNLPEYXYKDVHGKARAVPLPTKLNN 392
Query: 424 T--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVL 480
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++
Sbjct: 393 VPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNII 452
Query: 481 QVASGGQHSV 490
V GGQ SV
Sbjct: 453 LVGCGGQFSV 462
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPQAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|254586731|ref|XP_002498933.1| ZYRO0G21956p [Zygosaccharomyces rouxii]
gi|238941827|emb|CAR30000.1| ZYRO0G21956p [Zygosaccharomyces rouxii]
Length = 484
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 180/393 (45%), Gaps = 63/393 (16%)
Query: 39 VLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++R +DNV V VGGMHT+ + + +++
Sbjct: 48 IFCWGTGSMCELGLGPSAKNKEVKRPRLNPYLPVDNVKIVSFAVGGMHTLAVDSENNIWS 107
Query: 93 WGCNDEGALGREAEGDSE--------------------------FIPQTVNLP----KKA 122
WGCND GALGR G E IP+ P K
Sbjct: 108 WGCNDVGALGRSTAGAKEQLKDMDADNSSDDEDGDLNDLESTPMVIPRDYLPPLQEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVS--GIVKIA 178
VQ++A D+ L ++G +YAWG+FR + G +G E I Q P K+ S S +V++A
Sbjct: 168 VQVAATDNLGCVLFDNGDIYAWGTFRCNEGILGFYREEIKVQHEPWKVPSFSKYKVVQMA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P KH+ +
Sbjct: 228 PGKDHILFLDEEGVVFAWGNGQQYQLGRKVMD------RFRLKTLDP--RPSGLKHVRYI 279
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
F+G ++F ++ G +L++GLN Y Q G ++ E++ G P + M++
Sbjct: 280 FSGENHSFALTIDGKLLSWGLNQYGQCGVSE-EIEDGG--LVTVPQEVVLPEGVSVKMVS 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT---------PIPSLQDKT--I 346
+G+HHSL L +G +Y+FGR D +G+ P T PIP+
Sbjct: 337 AGEHHSLILAQDGDLYSFGRLDMFEIGIPKSDLPDNAYTDGHGKQRAVPIPTKLKNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+I+ G+ S A+ G+ Y WG G Y +G G
Sbjct: 397 KTISAGSHHSMAVAHNGIAYSWGFGETYAIGLG 429
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 148/383 (38%), Gaps = 72/383 (18%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-----------RSASRNARRGMSF 222
IV A G H + + S N+ + GC + G LGR T ++S + ++
Sbjct: 86 IVSFAVGGMHTLAVDSENNIWSWGCNDVGALGRSTAGAKEQLKDMDADNSSDDEDGDLND 145
Query: 223 LEPGEV--------PLKRKH--IDDVFTGVYNTFISSKGSILAFGLN--NYSQLGEADSE 270
LE + PL+ H + T + G I A+G N LG E
Sbjct: 146 LESTPMVIPRDYLPPLQEGHKVVQVAATDNLGCVLFDNGDIYAWGTFRCNEGILGFYREE 205
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
++ P + S S K +A G+ H L L+ EG ++A+G +LG K +
Sbjct: 206 IKVQ-----HEPWKVPSFSKYKVVQMAPGKDHILFLDEEGVVFAWGNGQQYQLGRKVMDR 260
Query: 331 -PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
+ P PS K + I G SFA+ +G L WG+ Q G +E +
Sbjct: 261 FRLKTLDPRPSGL-KHVRYIFSGENHSFALTIDGKLLSWGLNQYGQCGVSEEIEDGGLVT 319
Query: 384 ------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT---- 415
IL +G +Y+FGR D +G+ P T
Sbjct: 320 VPQEVVLPEGVSVKMVSAGEHHSLILAQDGDLYSFGRLDMFEIGIPKSDLPDNAYTDGHG 379
Query: 416 -----PIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPM 467
PIP+ +I+ G+ S A+ G+ Y WG G Y +G G +D P
Sbjct: 380 KQRAVPIPTKLKNVPKFKTISAGSHHSMAVAHNGIAYSWGFGETYAIGLGPAGEDTEVPT 439
Query: 468 KIEGKQLNNYTVLQVASGGQHSV 490
+I+ ++ ++ V GGQ SV
Sbjct: 440 RIKNTATQDHNIVMVGCGGQFSV 462
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 103/271 (38%), Gaps = 60/271 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG S K P+L + + K A G H+LA++SE I
Sbjct: 48 IFCWGTGSMCELGLGPSAKNKEVKRPRLNPYL--PVDNVKIVSFAVGGMHTLAVDSENNI 105
Query: 313 YAFGRHDYGRLG---------LKNV-----------------SEPVTEPTP-IPSLQD-- 343
+++G +D G LG LK++ S P+ P +P LQ+
Sbjct: 106 WSWGCNDVGALGRSTAGAKEQLKDMDADNSSDDEDGDLNDLESTPMVIPRDYLPPLQEGH 165
Query: 344 KTITSIACGN--CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR 401
K + A N CV F G +Y WG ++ G I F R +
Sbjct: 166 KVVQVAATDNLGCVLF---DNGDIYAWGT---FRCNEG-----------ILGFYREEI-- 206
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
+ EP +PS + +A G +D EGV++ WG G YQLG K
Sbjct: 207 -------KVQHEPWKVPSFSKYKVVQMAPGKDHILFLDEEGVVFAWGNGQQYQLGR-KVM 258
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
D ++ + V + SG HS L
Sbjct: 259 DRFRLKTLDPRPSGLKHVRYIFSGENHSFAL 289
>gi|348685793|gb|EGZ25608.1| hypothetical protein PHYSODRAFT_297207 [Phytophthora sojae]
Length = 529
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 185/387 (47%), Gaps = 50/387 (12%)
Query: 36 GGVVLTCGQGDTGQLGLG-----PDVM---ERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
GG +LT G GD GQLG G D+M R L++ + V GG+H+ +T
Sbjct: 106 GGHLLTFGSGDCGQLGHGVEGEDEDLMVKFPRVVRPLLKLKLKIARVACGGLHSAVITTA 165
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKK--AVQISAGDSHSVALLEDGTVYA 143
G+VYTWGC+D+GALGR+ + E P V+ P++ AVQI GD H+ + G VY
Sbjct: 166 GEVYTWGCSDDGALGRDGD---ENTPSKVDGFGPEQATAVQIVGGDCHTAVVTLAGRVYM 222
Query: 144 WGSFRDSHGSMGLKGEGI-------QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
WG +RD G Q P ++++ I + G + T+ G + +
Sbjct: 223 WGCYRDKEGKQWCDAPSAKAAFKQKQTRPFLIKALDNIADVKCGNAFNLARTNDGRVYSW 282
Query: 197 GCPEQGQLGR---ITQRSASRNARRGMSF---LEPGEVPLKRKH---IDDVFTGVYNTF- 246
G E GQLGR + A + M + L+P V L + + + G Y++
Sbjct: 283 GLGEMGQLGRKVDAEMKDADGEYKVEMVYKEHLQPKLVMLGKDQLPVVKSIGCGSYHSMF 342
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+SS G + GLNNY QLG S + C L++ LS K + G+HHS+
Sbjct: 343 ALSSNGYLYTCGLNNYGQLGIG------STDNC-SELQLVEDLSFKNVAFVDGGEHHSVV 395
Query: 306 LNSEGKIYAFGRHDYGRLGL---------KNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
L ++G +Y FGR D G+LG+ K+ + VT P P S + + IA G+ +
Sbjct: 396 LTNDGDVYTFGRADSGQLGMLDTCSTGDFKDRPQKVTIPKPKNSGSN-VVRMIATGSNHA 454
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD 383
A+ ++ WG G+ QLG+G + D
Sbjct: 455 LALTESDAIFSWGYGDMLQLGHGLDQD 481
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 164/389 (42%), Gaps = 77/389 (19%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I ++A G H ++T+ G + T GC + G LGR + G P +
Sbjct: 149 IARVACGGLHSAVITTAGEVYTWGCSDDGALGRDGDENTPSKV--------DGFGPEQAT 200
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFT-PHLIKSLSDK 291
+ V + ++ G + +G + + D+ K+ T P LIK+L +
Sbjct: 201 AVQIVGGDCHTAVVTLAGRVYMWGCYRDKEGKQWCDAPSAKAAFKQKQTRPFLIKALDN- 259
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-----------VTEPTPIPS 340
+ G +LA ++G++Y++G + G+LG K +E V + P
Sbjct: 260 -IADVKCGNAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMKDADGEYKVEMVYKEHLQPK 318
Query: 341 L------QDKTITSIACGNCVS-FAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
L Q + SI CG+ S FA+ S G LY G+ N QLG G D+
Sbjct: 319 LVMLGKDQLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGSTDNCSELQLVEDL 378
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGL---------KNVSEPVTEPTPIP 418
+L ++G +Y FGR D G+LG+ K+ + VT P P
Sbjct: 379 SFKNVAFVDGGEHHSVVLTNDGDVYTFGRADSGQLGMLDTCSTGDFKDRPQKVTIPKPKN 438
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI--------- 469
S + + IA G+ + A+ ++ WG G+ QLG+G + D +P ++
Sbjct: 439 SGSN-VVRMIATGSNHALALTESDAIFSWGYGDMLQLGHGLDQDENKPRQLNWSNATYGK 497
Query: 470 --EGKQLNNYTVLQVASGGQHSVILAKPK 496
+ K+ +LQ+ +GGQHS +LA K
Sbjct: 498 EGKNKKFGEAEILQIEAGGQHSAVLACAK 526
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 38/315 (12%)
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
G+LLT G + GQLG + + + P + LK K G+++ I++
Sbjct: 107 GHLLTFGSGDCGQLGHGVEGEDEDLMVKFPRVVRP-LLKLKLKIARVACGGLHSAVITTA 165
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT--MLASGQHHSLALNS 308
G + +G ++ LG E TP + ++ T + G H+ +
Sbjct: 166 GEVYTWGCSDDGALGRDGDEN---------TPSKVDGFGPEQATAVQIVGGDCHTAVVTL 216
Query: 309 EGKIYAFG--RHDYGRLGLKNVS------EPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
G++Y +G R G+ S + T P I +L + I + CGN + A
Sbjct: 217 AGRVYMWGCYRDKEGKQWCDAPSAKAAFKQKQTRPFLIKALDN--IADVKCGNAFNLART 274
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
++G +Y WG+G QLG + ++ +++G+ ++ V + +P +
Sbjct: 275 NDGRVYSWGLGEMGQLGRKVDAEMKDADGEYK-----------VEMVYKEHLQPKLVMLG 323
Query: 421 QDK--TITSIACGNCVS-FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
+D+ + SI CG+ S FA+ S G LY G+ N QLG G D+ E +E N
Sbjct: 324 KDQLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGSTDNCSELQLVEDLSFKN- 382
Query: 478 TVLQVASGGQHSVIL 492
V V G HSV+L
Sbjct: 383 -VAFVDGGEHHSVVL 396
>gi|323309055|gb|EGA62283.1| Srm1p [Saccharomyces cerevisiae FostersO]
Length = 460
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 63/397 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 26 IFCWGTGSMCELGLGPXAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 85
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 86 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 145
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 146 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 205
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 206 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 257
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 258 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 314
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 315 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 374
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S+A G+ S A+ G+ Y WG G Y +G G +D
Sbjct: 375 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPSED 411
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 26 IFCWGT--GSMCELGLGPXAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 83
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 84 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 143
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 144 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 196
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 197 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 253
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 254 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 313
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 314 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 373
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 374 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPSEDDTEVPTRIKNTATQDHNIILVG 433
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 434 CGGQFSV 440
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 144 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 203
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 204 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 244
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 245 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 297
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 298 KPKRLALPDNVVIRSIAAGEHHSLILSQ 325
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 26 IFCWGTGSMCELGLGPXAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 83
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 84 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 143
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 144 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 179
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 180 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 235
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 236 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 269
>gi|323348646|gb|EGA82889.1| Srm1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 482
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 63/397 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPXAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S+A G+ S A+ G+ Y WG G Y +G G +D
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPXED 433
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 48 IFCWGT--GSMCELGLGPXAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 218
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 275
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPXEDDTEVPTRIKNTATQDHNIILVG 455
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 456 CGGQFSV 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 266
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 267 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 319
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 320 KPKRLALPDNVVIRSIAAGEHHSLILSQ 347
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPXAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLGLKN----------------------VSEPVTEPTPIPS------LQDK 344
+++G +D G LG ++E + P IP +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|444318081|ref|XP_004179698.1| hypothetical protein TBLA_0C03770 [Tetrapisispora blattae CBS 6284]
gi|387512739|emb|CCH60179.1| hypothetical protein TBLA_0C03770 [Tetrapisispora blattae CBS 6284]
Length = 507
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 189/408 (46%), Gaps = 66/408 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVME------RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP R L D ++ + VGGMHT+ L +D V++
Sbjct: 70 IFCWGTGSMCELGLGPLAKNKEVKRPRLNAFLSSDKAKIISIAVGGMHTLALDQDNNVWS 129
Query: 93 WGCNDEGALGREA------------------EGD---SEFIPQTVN---LPK-------K 121
WGCND GALGR+ +GD SE P + P+ K
Sbjct: 130 WGCNDVGALGRDTSSANENLKDMDADSSDDEDGDLNESESTPMKIPRECFPELDCGEGIK 189
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS----GIV 175
VQ+ A D+ S ALL +G VY+WG+FR + G +G + IQ+ P KL + S IV
Sbjct: 190 IVQLIATDNLSCALLSNGEVYSWGTFRCNEGILGFYKDEIQIQRKPWKLPTFSTNNYKIV 249
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
++ASG DH + L G + + G +Q QLGR + L+P P K+I
Sbjct: 250 QMASGKDHVLFLDESGIVYSWGNGQQNQLGRKVMEEFR------LKTLDP--RPFGLKNI 301
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
+ +G ++F + GS++++GLN + Q G SE + G P ++K D K
Sbjct: 302 KYIGSGENHSFALKQDGSLVSWGLNQFGQCGT--SEKIEDG-ALVTIPEVVKLPKDFKIK 358
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLK--NVSE---------PVTEPTPIPSLQD 343
+++ G+HH+L L G +Y GR D +G+ N+ E P + P P
Sbjct: 359 VVSGGEHHTLFLGENGDLYVAGRLDMFEIGISKDNLPEYTYQDEHKKPRSVPLPTRLENV 418
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
++ G+ S AI + G+ Y WG G Y +G G D + + +I
Sbjct: 419 PKFRNVCAGSHHSLAIATNGIAYSWGFGETYAVGLGPSGDDIETPTRI 466
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 149/387 (38%), Gaps = 77/387 (19%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR---------RGMSFLE 224
I+ IA G H + L N+ + GC + G LGR T SA+ N + E
Sbjct: 108 IISIAVGGMHTLALDQDNNVWSWGCNDVGALGRDTS-SANENLKDMDADSSDDEDGDLNE 166
Query: 225 PGEVPLKR--------------KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEAD 268
P+K K + + T + + S G + ++G ++ LG
Sbjct: 167 SESTPMKIPRECFPELDCGEGIKIVQLIATDNLSCALLSNGEVYSWGTFRCNEGILGFYK 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E+Q + P S ++ K +ASG+ H L L+ G +Y++G +LG K +
Sbjct: 227 DEIQIQ-RKPWKLPTF--STNNYKIVQMASGKDHVLFLDESGIVYSWGNGQQNQLGRKVM 283
Query: 329 SE---PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-- 383
E +P P K I I G SFA+ +G L WG+ Q G ++ +
Sbjct: 284 EEFRLKTLDPRPFGL---KNIKYIGSGENHSFALKQDGSLVSWGLNQFGQCGTSEKIEDG 340
Query: 384 ----------------------------ILNSEGKIYAFGRHDYGRLGLK--NVSE---- 409
L G +Y GR D +G+ N+ E
Sbjct: 341 ALVTIPEVVKLPKDFKIKVVSGGEHHTLFLGENGDLYVAGRLDMFEIGISKDNLPEYTYQ 400
Query: 410 -----PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDI 463
P + P P ++ G+ S AI + G+ Y WG G Y +G G DDI
Sbjct: 401 DEHKKPRSVPLPTRLENVPKFRNVCAGSHHSLAIATNGIAYSWGFGETYAVGLGPSGDDI 460
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSV 490
P +I+ ++ ++ V +GGQ SV
Sbjct: 461 ETPTRIKNTATLDHNIIMVGAGGQFSV 487
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVV-------LTCG-------------QGDTGQLGLG 53
E+ S + + E P L C G +V L+C + + G LG
Sbjct: 166 ESESTPMKIPRECFPELDCGEGIKIVQLIATDNLSCALLSNGEVYSWGTFRCNEGILGFY 225
Query: 54 PD--VMERKTFALVEDLDN---VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD 108
D ++RK + L N +V++ G H + L E G VY+WG + LGR+
Sbjct: 226 KDEIQIQRKPWKLPTFSTNNYKIVQMASGKDHVLFLDESGIVYSWGNGQQNQLGRKVM-- 283
Query: 109 SEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWG--SFRDSHGSMGLKGEGIQ 162
EF +T++ K I +G++HS AL +DG++ +WG F S ++ +
Sbjct: 284 EEFRLKTLDPRPFGLKNIKYIGSGENHSFALKQDGSLVSWGLNQFGQCGTSEKIEDGALV 343
Query: 163 KTP--LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
P +KL I ++ G H + L G+L AG + ++G
Sbjct: 344 TIPEVVKLPKDFKIKVVSGGEHHTLFLGENGDLYVAGRLDMFEIG 388
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 124/319 (38%), Gaps = 88/319 (27%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHH 302
+ F GS+ GL ++ + EV++ F + SDK K +A G H
Sbjct: 69 DIFCWGTGSMCELGLGPLAK----NKEVKRPRLNAFLS-------SDKAKIISIAVGGMH 117
Query: 303 SLALNSEGKIYAFGRHDYGRLG---------LK------------NVSEPVTEPTPIPSL 341
+LAL+ + ++++G +D G LG LK +++E + P IP
Sbjct: 118 TLALDQDNNVWSWGCNDVGALGRDTSSANENLKDMDADSSDDEDGDLNESESTPMKIPR- 176
Query: 342 QDKTITSIACG-----------NCVSFAIDSEGVLYGWGM-------------------- 370
+ + CG + +S A+ S G +Y WG
Sbjct: 177 --ECFPELDCGEGIKIVQLIATDNLSCALLSNGEVYSWGTFRCNEGILGFYKDEIQIQRK 234
Query: 371 --------GNGY---QLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPT 415
N Y Q+ +GK+ + L+ G +Y++G +LG K + E +P
Sbjct: 235 PWKLPTFSTNNYKIVQMASGKDHVLFLDESGIVYSWGNGQQNQLGRKVMEEFRLKTLDPR 294
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEPMKIEGKQ 473
P K I I G SFA+ +G L WG+ Q G + ED L + K
Sbjct: 295 PFGL---KNIKYIGSGENHSFALKQDGSLVSWGLNQFGQCGTSEKIEDGALVTIPEVVKL 351
Query: 474 LNNYTVLQVASGGQHSVIL 492
++ + +V SGG+H +
Sbjct: 352 PKDFKI-KVVSGGEHHTLF 369
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL----DNVVEVVVGG-MHTVCLTEDGKVY 91
G +++ G GQ G + + + E + D ++VV GG HT+ L E+G +Y
Sbjct: 318 GSLVSWGLNQFGQCGTSEKIEDGALVTIPEVVKLPKDFKIKVVSGGEHHTLFLGENGDLY 377
Query: 92 TWGCNDEGALGREAEGDSEFI-------PQTVNLPK------KAVQISAGDSHSVALLED 138
G D +G + E+ P++V LP K + AG HS+A+ +
Sbjct: 378 VAGRLDMFEIGISKDNLPEYTYQDEHKKPRSVPLPTRLENVPKFRNVCAGSHHSLAIATN 437
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
G Y+WG +G G+ I+ TP ++++ + + DH +++ G
Sbjct: 438 GIAYSWGFGETYAVGLGPSGDDIE-TPTRIKNTATL-------DHNIIMVGAG 482
>gi|146421762|ref|XP_001486825.1| hypothetical protein PGUG_00202 [Meyerozyma guilliermondii ATCC
6260]
Length = 437
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 186/387 (48%), Gaps = 65/387 (16%)
Query: 49 QLGLGPDVMERKT-------FALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEG 99
+LGLGP ++ + E L N +V+ GGMHT+ L G V++WG ND G
Sbjct: 3 ELGLGPAASTKEVKRPRLNPYLTKEKLGNELIVDFAAGGMHTLVLDSAGNVWSWGGNDGG 62
Query: 100 ALGREAEGD---------------------SEFIPQTVN-LP----KKAVQISAGDSHSV 133
LGR+ G +E P V LP K VQ++A D+ S
Sbjct: 63 VLGRDTSGAEVLKDLDNASDSDDEDGDLNVAESTPGKVEGLPPIADAKIVQLAATDNLSA 122
Query: 134 ALLEDGTVYAWGSFRDSHGSMG-LKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
L +G VYAWGSFR + G +G L+ E IQ++P+K+ + IV++A G DH + L +G
Sbjct: 123 LLYSNGDVYAWGSFRCNEGILGFLRDEIKIQRSPMKITGLKNIVQLAPGKDHLLALDLKG 182
Query: 192 NLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISS 249
+ G +Q QLGR I +R + LEP + L +I + +G ++ F I
Sbjct: 183 IVYAWGNGQQYQLGRKILERHRYKT-------LEPHAMALT--NIKYIASGDFHCFAIDH 233
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ +GLN + Q G + + + P +I+ LS+ +A+G+HHS+AL +
Sbjct: 234 DDRVYTWGLNQFGQCGFTNENGELEDGSLVSKPTVIEKLSNLNIQEIAAGEHHSMALTAS 293
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVT---------EPTPIPS-LQ-------DKTITSIACG 352
G +Y +GR+D +G+ P + P+P+ LQ ++ CG
Sbjct: 294 GDVYTWGRYDMKEVGIPQDKLPESTFKDAHGKVRAVPVPTKLQVGAKGENGVKFKTVGCG 353
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ SF++ +G++Y WG + Y LG G
Sbjct: 354 SHHSFSVTDDGMVYAWGFADTYALGLG 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 137/332 (41%), Gaps = 88/332 (26%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IV A+G H ++L S GN+ + G + G LGR T
Sbjct: 34 IVDFAAGGMHTLVLDSAGNVWSWGGNDGGVLGRDTS------------------------ 69
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL---SD 290
G+ + L+N S + D ++ N TP ++ L +D
Sbjct: 70 -----------------GAEVLKDLDNASDSDDEDGDL----NVAESTPGKVEGLPPIAD 108
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG-LKNVSEPVTEPTPIPSLQDKTIT 347
K LA+ + S L S G +YA+G R + G LG L++ + P I L K I
Sbjct: 109 AKIVQLAATDNLSALLYSNGDVYAWGSFRCNEGILGFLRDEIKIQRSPMKITGL--KNIV 166
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+A G A+D +G++Y WG G YQLG KI RH Y L
Sbjct: 167 QLAPGKDHLLALDLKGIVYAWGNGQQYQLGR-----------KI--LERHRYKTL----- 208
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDD- 462
EP ++ I IA G+ FAID + +Y WG+ Q G NG+ +D
Sbjct: 209 -----EPH---AMALTNIKYIASGDFHCFAIDHDDRVYTWGLNQFGQCGFTNENGELEDG 260
Query: 463 --ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ +P IE +L+N + ++A+G HS+ L
Sbjct: 261 SLVSKPTVIE--KLSNLNIQEIAAGEHHSMAL 290
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 120/313 (38%), Gaps = 70/313 (22%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQ 124
L N+V++ G H + L G VY WG + LGR E P + L
Sbjct: 162 LKNIVQLAPGKDHLLALDLKGIVYAWGNGQQYQLGRKILERHRYKTLEPHAMALTNIKY- 220
Query: 125 ISAGDSHSVALLEDGTVYAWG-------SFRDSHGSMGLKGEGIQKTPLKLESVSG--IV 175
I++GD H A+ D VY WG F + +G L+ + P +E +S I
Sbjct: 221 IASGDFHCFAIDHDDRVYTWGLNQFGQCGFTNENGE--LEDGSLVSKPTVIEKLSNLNIQ 278
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+IA+G H + LT+ G++ T G + ++G I Q +
Sbjct: 279 EIAAGEHHSMALTASGDVYTWGRYDMKEVG-IPQDKLPES-------------------- 317
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
TF + G + A + Q+G K + KF
Sbjct: 318 ---------TFKDAHGKVRAVPVPTKLQVG-------------------AKGENGVKFKT 349
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI--PSLQDKTITSIACGN 353
+ G HHS ++ +G +YA+G D LGL V V PT I + + + I IA G
Sbjct: 350 VGCGSHHSFSVTDDGMVYAWGFADTYALGLGPVESDVEVPTRIVNTATKHEDIQLIAGGG 409
Query: 354 CVSFA----IDSE 362
S + ID E
Sbjct: 410 QFSISGGIKIDDE 422
>gi|151943711|gb|EDN62021.1| pheromone response pathway suppressor [Saccharomyces cerevisiae
YJM789]
gi|190407053|gb|EDV10320.1| regulator of chromosome condensation [Saccharomyces cerevisiae
RM11-1a]
gi|207345371|gb|EDZ72215.1| YGL097Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 482
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 181/398 (45%), Gaps = 64/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPQAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDD 383
S+A G+ S A+ G+ Y WG G Y +G G EDD
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 434
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 165/430 (38%), Gaps = 95/430 (22%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK----------TPLKLESVSGIVKIASGADHFVMLTSR 190
++ WG+ GSM G G Q P + I+ A G H + L
Sbjct: 48 IFCWGT-----GSMCELGLGPQAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEE 102
Query: 191 GNLLTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK------ 231
N+ + GC + G LGR T + + + ++ LE P ++P +
Sbjct: 103 SNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA 162
Query: 232 --RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLI 285
K + T + + S G + A+G ++ LG + ++QK TP +
Sbjct: 163 EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKV 215
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQ 342
+ S LA G+ H L L+ EG ++A+G +LG K + +P P
Sbjct: 216 PTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL-- 273
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------- 383
+ + IA G FA+ + L WG+ Q G ++ +
Sbjct: 274 -RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVI 332
Query: 384 -----------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDK 423
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 333 RSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNN 392
Query: 424 T--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVL 480
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++
Sbjct: 393 VPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNII 452
Query: 481 QVASGGQHSV 490
V GGQ SV
Sbjct: 453 LVGCGGQFSV 462
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPQAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|323337589|gb|EGA78834.1| Srm1p [Saccharomyces cerevisiae Vin13]
Length = 482
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 181/398 (45%), Gaps = 64/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPXAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDD 383
S+A G+ S A+ G+ Y WG G Y +G G EDD
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 434
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 48 IFCWGT--GSMCELGLGPXAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 218
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 275
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVG 455
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 456 CGGQFSV 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 266
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 267 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 319
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 320 KPKRLALPDNVVIRSIAAGEHHSLILSQ 347
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPXAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLGLKN----------------------VSEPVTEPTPIPS------LQDK 344
+++G +D G LG ++E + P IP +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|349578129|dbj|GAA23295.1| K7_Srm1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 482
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 63/397 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S+A G+ S A+ G+ Y WG G Y +G G +D
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPSED 433
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 48 IFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 218
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 275
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPSEDDTEVPTRIKNTATQDHNIILVG 455
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 456 CGGQFSV 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 266
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 267 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 319
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 320 KPKRLALPDNVVIRSIAAGEHHSLILSQ 347
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 225/483 (46%), Gaps = 64/483 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G +GQLG G + V+ L VV V G H++ + DG V+ WG
Sbjct: 15 GTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGS 74
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG E Q + L + ++AG SH +AL DGTV+AWGS S G
Sbjct: 75 NASGQLGDETTISRSTPVQVLGL-SGVLFVAAGSSHVLALRYDGTVWAWGS-----NSSG 128
Query: 156 LKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G+G + P++ + +SG++ +A+G +H + + S G+ G GQLG T +
Sbjct: 129 QRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNR 188
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
EP +V + ++ + S G++ A+G N QLG+ +
Sbjct: 189 P----------EPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTT--- 235
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
T P ++ LS +A+G HHSLA+ ++G ++ +GR+D +LG ++ V
Sbjct: 236 ----TDRLVPVQVQGLS--GVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLV 289
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------------- 379
P + L + ++A G+ S A+ S+G ++ G N QLG+G
Sbjct: 290 --PAQVQGL--SAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLS 345
Query: 380 -----KEDD----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+D + S+G ++A+G + G+LG + + P + L + + S+
Sbjct: 346 GVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLV-PVQVSGLSE--VVSVVA 402
Query: 431 GNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ S+G + WG N Y QLG+G + P++++ QL+ V VASG HS
Sbjct: 403 GGYHSLAVRSDGSAWDWGS-NAYGQLGDGSTTYLPVPVRVQ--QLSG--VGAVASGSSHS 457
Query: 490 VIL 492
+ L
Sbjct: 458 LAL 460
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 221/473 (46%), Gaps = 61/473 (12%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
Q + S+ V V + + +L ++ G V G +GQLG + R T V L V
Sbjct: 43 QVQGLSEVVAVDAGSSHSLAVRSDG-TVWAWGSNASGQLG-DETTISRSTPVQVLGLSGV 100
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ V G H + L DG V+ WG N G G + ++ +P + ++AGD+H
Sbjct: 101 LFVAAGSSHVLALRYDGTVWAWGSNSSGQRG-DGTTNNRALPVQAQGLSGVMAVAAGDNH 159
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+A+ DG+ +AWGS ++ G +G + P++++ +SG+V +A+G+ H + + S G
Sbjct: 160 SLAVRSDGSAWAWGS--NASGQLGEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDG 217
Query: 192 NLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
+ G GQLG T R + G+S G V + H ++ + +
Sbjct: 218 TVWAWGANASGQLGDGTTTDRLVPVQVQ-GLS----GVVAVAAGHH-------HSLAVRN 265
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ +G N+ +QLG+ G+ P ++ LS +A+G HSLA+ S+
Sbjct: 266 DGTVWGWGRNDSNQLGK--------GSMRLLVPAQVQGLS--AVVAVAAGDTHSLAVGSD 315
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++A G ++ G+LG + + P+P L + S+A + S A+ S+G ++ WG
Sbjct: 316 GTVWAVGSNNNGQLGDGTTTYRLV---PVPVLSG--VVSVAANDYHSLAVRSDGTVWAWG 370
Query: 370 MGNGYQLGNGKEDDIL------------------------NSEGKIYAFGRHDYGRLGLK 405
+ QLG+G L S+G + +G + YG+LG
Sbjct: 371 YNSTGQLGDGTTTTRLVPVQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDG 430
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ + P P+ Q + ++A G+ S A+ S+G ++ WG + QLGNG
Sbjct: 431 STTY---LPVPVRVQQLSGVGAVASGSSHSLALRSDGTVWTWGYNSFGQLGNG 480
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 209/450 (46%), Gaps = 71/450 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF----IPQTVNLPKKAVQISAGD 129
+ G H++ L DG V+ WG N G LG +G + + +P V + V + AG
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLG---DGTTTYSPVPVPVQVQGLSEVVAVDAGS 57
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
SHS+A+ DGTV+AWGS ++ G +G + + TP+++ +SG++ +A+G+ H + L
Sbjct: 58 SHSLAVRSDGTVWAWGS--NASGQLGDETTISRSTPVQVLGLSGVLFVAAGSSHVLALRY 115
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNT 245
G + G GQ G T N R +P++ + + V ++
Sbjct: 116 DGTVWAWGSNSSGQRGDGTT-----NNR---------ALPVQAQGLSGVMAVAAGDNHSL 161
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ S GS A+G N QLGE T P ++ +A+G HSLA
Sbjct: 162 AVRSDGSAWAWGSNASGQLGEG---------TTSNRPEPVQVQGLSGVVAVAAGSAHSLA 212
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ S+G ++A+G + G+LG ++ + P + L + ++A G+ S A+ ++G +
Sbjct: 213 VRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQGLSG--VVAVAAGHHHSLAVRNDGTV 269
Query: 366 YGWGMGNGYQLGNGK-----------------------EDDILNSEGKIYAFGRHDYGRL 402
+GWG + QLG G + S+G ++A G ++ G+L
Sbjct: 270 WGWGRNDSNQLGKGSMRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQL 329
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G + + P+P L + S+A + S A+ S+G ++ WG + QLG+G
Sbjct: 330 GDGTTTYRL---VPVPVLSG--VVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTT 384
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
L P+++ G V+ V +GG HS+ +
Sbjct: 385 RLVPVQVSGLS----EVVSVVAGGYHSLAV 410
>gi|365990231|ref|XP_003671945.1| hypothetical protein NDAI_0I01330 [Naumovozyma dairenensis CBS 421]
gi|343770719|emb|CCD26702.1| hypothetical protein NDAI_0I01330 [Naumovozyma dairenensis CBS 421]
Length = 501
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 186/402 (46%), Gaps = 72/402 (17%)
Query: 39 VLTCGQGDTGQLGLGP----DVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYT 92
+ G G +LG GP ++R +D+V + VGGMHT+ L ++ +++
Sbjct: 58 IFCWGSGPMCELGFGPLAKNKEVKRPRLNPFLPIDSVKIISFAVGGMHTIALDDENNIWS 117
Query: 93 WGCNDEGALGREAEGDSEF------------------------------IPQTVNLP--- 119
WGCND GALGR+ G E IP+ P
Sbjct: 118 WGCNDVGALGRDTSGAKEVLKDIESKQDGDDDDDDDDGDLNELESTPYKIPRECFPPLKE 177
Query: 120 -KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVSG--I 174
K +Q+ A D+ S L +G VYAWG+FR + G +G + IQ+TP K+ + S I
Sbjct: 178 GHKIIQLGATDNLSCVLFSNGDVYAWGTFRCNEGILGFYQDQIKIQRTPWKVPNFSKYQI 237
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V++A G DH + L G + G +Q QLGR R + L+P P KH
Sbjct: 238 VQMAPGKDHVLFLDEAGVVFAWGNGQQHQLGRKVME------RFRLKTLDPR--PFGLKH 289
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I + +G + F I+ +I+++GLN + Q G ++ EV+ P IK + + +
Sbjct: 290 IKYIASGENHCFAITKDNTIMSWGLNQFGQCGVSE-EVEDGALVA--VPRKIKFVGEDEN 346
Query: 294 TML-----ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIP 339
+L ++G+HHSL L +G +Y FGR D +G+ P P+P
Sbjct: 347 KILNVKSISAGEHHSLILLEDGTLYTFGRFDMFEIGIAKDKLPEYTYYDVHDKPRSVPLP 406
Query: 340 S-LQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ LQD +IA G+ S A+ + G++Y WG G Y +G G
Sbjct: 407 TKLQDVPKFKNIAAGSHHSLAVATNGIVYSWGFGETYAVGLG 448
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 154/402 (38%), Gaps = 86/402 (21%)
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ---------------- 209
L ++SV I+ A G H + L N+ + GC + G LGR T
Sbjct: 89 LPIDSVK-IISFAVGGMHTIALDDENNIWSWGCNDVGALGRDTSGAKEVLKDIESKQDGD 147
Query: 210 -----RSASRNARRGMSFLEPGEV--PLKRKH--IDDVFTGVYNTFISSKGSILAFGLNN 260
N + P E PLK H I T + + S G + A+G
Sbjct: 148 DDDDDDDGDLNELESTPYKIPRECFPPLKEGHKIIQLGATDNLSCVLFSNGDVYAWGTFR 207
Query: 261 YSQ--LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG-- 316
++ LG +++ TP + + S + +A G+ H L L+ G ++A+G
Sbjct: 208 CNEGILGFYQDQIKIQR-----TPWKVPNFSKYQIVQMAPGKDHVLFLDEAGVVFAWGNG 262
Query: 317 -RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
+H GR ++ +P P K I IA G FAI + + WG+ Q
Sbjct: 263 QQHQLGRKVMERFRLKTLDPRPFGL---KHIKYIASGENHCFAITKDNTIMSWGLNQFGQ 319
Query: 376 LGNGKE--------------------DDILN---------------SEGKIYAFGRHDYG 400
G +E + ILN +G +Y FGR D
Sbjct: 320 CGVSEEVEDGALVAVPRKIKFVGEDENKILNVKSISAGEHHSLILLEDGTLYTFGRFDMF 379
Query: 401 RLGLKNVSEP---------VTEPTPIPS-LQD-KTITSIACGNCVSFAIDSEGVLYGWGM 449
+G+ P P+P+ LQD +IA G+ S A+ + G++Y WG
Sbjct: 380 EIGIAKDKLPEYTYYDVHDKPRSVPLPTKLQDVPKFKNIAAGSHHSLAVATNGIVYSWGF 439
Query: 450 GNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G Y +G G +DI P +I+ ++ ++ + GGQ SV
Sbjct: 440 GETYAVGLGPAGEDIEIPTRIKNTATQDHNIVLIGCGGQFSV 481
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-----LKNVSEPVTEPTPIPSLQDKTI 346
K A G H++AL+ E I+++G +D G LG K V + + D
Sbjct: 95 KIISFAVGGMHTIALDDENNIWSWGCNDVGALGRDTSGAKEVLKDIESKQDGDDDDDDDD 154
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDD---ILNSEGKIYAFG--RHDYG 400
+ + I E + G+++ G D+ +L S G +YA+G R + G
Sbjct: 155 GDLNELESTPYKIPRECFP---PLKEGHKIIQLGATDNLSCVLFSNGDVYAWGTFRCNEG 211
Query: 401 RLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
LG + P +P+ I +A G +D GV++ WG G +QLG
Sbjct: 212 ILGFYQDQIKIQRTPWKVPNFSKYQIVQMAPGKDHVLFLDEAGVVFAWGNGQQHQLGR-- 269
Query: 460 EDDILEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
++E + ++ + + +ASG H + K
Sbjct: 270 --KVMERFRLKTLDPRPFGLKHIKYIASGENHCFAITK 305
>gi|367010452|ref|XP_003679727.1| hypothetical protein TDEL_0B03870 [Torulaspora delbrueckii]
gi|359747385|emb|CCE90516.1| hypothetical protein TDEL_0B03870 [Torulaspora delbrueckii]
Length = 482
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 181/393 (46%), Gaps = 63/393 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G G +LGLGP ++ L D +V VGGMHT+ D +++
Sbjct: 48 VFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPHDQARIVGFAVGGMHTLAFDSDSNIWS 107
Query: 93 WGCNDEGALGREAEGDSEF--------------------------IPQTVNLP----KKA 122
WGCND GALGR+ G SE IP P K
Sbjct: 108 WGCNDVGALGRDTSGASEKLKDMDADNSSDDEDGDLNELESTPAKIPVEFFPPLAKGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVSG--IVKIA 178
VQ++A D+ S L +G +YA+G+FR + G +G + IQ+TP K+ + S IV++A
Sbjct: 168 VQLAATDNLSCVLFSNGDIYAFGTFRCNEGILGFYRDEIKIQRTPWKVPTFSKFKIVQMA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P KHI +
Sbjct: 228 PGKDHVLFLDEEGAVFAWGNGQQYQLGRKVME------RFRLKTLDP--RPFGLKHIKYI 279
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G + F +++ G ++++GLN + Q G ++ E++ G + L+ K M++
Sbjct: 280 SAGENHNFALTADGKLVSWGLNQFGQCGVSE-EIEDGGLVTKWKKVLLPDGISVK--MVS 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTE-PTPIPSLQDKTI 346
+G+HHSL L+ EG +Y FGR D +GL K+V + P P +
Sbjct: 337 AGEHHSLVLSQEGDLYTFGRLDMFEIGLARDKLPDFTYKDVHDKARAVPIPTKLVDVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
++A G+ S A+ G+ Y WG G Y +G G
Sbjct: 397 KNVAAGSHHSVALAQNGIAYSWGFGETYAVGLG 429
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 170/425 (40%), Gaps = 85/425 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
V+ WG+ S +GL K + +++ P + IV A G H + S N+
Sbjct: 48 VFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPHDQARIVGFAVGGMHTLAFDSDSNI 105
Query: 194 LTAGCPEQGQLGRITQ-----------RSASRNARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T ++S + ++ LE P ++P++
Sbjct: 106 WSWGCNDVGALGRDTSGASEKLKDMDADNSSDDEDGDLNELESTPAKIPVEFFPPLAKGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLN--NYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
K + T + + S G I AFG N LG E++ TP + + S
Sbjct: 166 KVVQLAATDNLSCVLFSNGDIYAFGTFRCNEGILGFYRDEIKIQR-----TPWKVPTFSK 220
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
K +A G+ H L L+ EG ++A+G ++ GR ++ +P P K I
Sbjct: 221 FKIVQMAPGKDHVLFLDEEGAVFAWGNGQQYQLGRKVMERFRLKTLDPRPFGL---KHIK 277
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ 383
I+ G +FA+ ++G L WG+ Q G +E +
Sbjct: 278 YISAGENHNFALTADGKLVSWGLNQFGQCGVSEEIEDGGLVTKWKKVLLPDGISVKMVSA 337
Query: 384 ------ILNSEGKIYAFGRHDYGRLGL----------KNVSEPVTE-PTPIPSLQDKTIT 426
+L+ EG +Y FGR D +GL K+V + P P +
Sbjct: 338 GEHHSLVLSQEGDLYTFGRLDMFEIGLARDKLPDFTYKDVHDKARAVPIPTKLVDVPKFK 397
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASG 485
++A G+ S A+ G+ Y WG G Y +G G +D P +I+ + ++ V G
Sbjct: 398 NVAAGSHHSVALAQNGIAYSWGFGETYAVGLGPSGEDTEVPTRIKNTATQEHNIIFVGCG 457
Query: 486 GQHSV 490
GQ SV
Sbjct: 458 GQFSV 462
>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 750
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 227/491 (46%), Gaps = 78/491 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G ER+ V+ L VV V VG H++ L DG V+
Sbjct: 65 GTVWAVGENVFGQLGDG-TTSERRVPVQVQGLSGVVAVAVGAYHSLALRSDGTVW----- 118
Query: 97 DEGALGREA--EGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
A+GR A GD TV P V ++AG HS+AL DGTV+AWGS +
Sbjct: 119 ---AVGRAACQGGDGTASDCTVPAPVPGLSGGVAVAAGGLHSLALRSDGTVWAWGS--NF 173
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G + P++++ ++G+V +A+G H + + S G + T G G LG T
Sbjct: 174 EGQLGDGTTNVSLVPVRVKKLTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGT-- 231
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDD---VFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
++SR +VP++ + + V GVY++ + S G++ +G N QLG+
Sbjct: 232 TSSR------------KVPVQVQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANGVGQLGD 279
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ P + LS + +A+G SLA+ +G ++A+G + YG LG
Sbjct: 280 GTPMRR------VLVPVQAQGLSGVE--AVAAGHSLSLAVRFDGTVWAWGGNSYGALGND 331
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDIL 385
+ T P +P L ++ + + A+ S+G ++ WG GN Y QLG+G + L
Sbjct: 332 TIETMSTVPVQVPGLSGG--VTVVAASSHALAVRSDGTVWAWG-GNHYGQLGDGTTSERL 388
Query: 386 ------------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
S+ ++A+GR+ G+LG + P P+P L
Sbjct: 389 VAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLG-DGTTRRREVPVPVPKL- 446
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
++ ++A G S A+ +G ++ WG Q+G+G E P+++ N +
Sbjct: 447 -SSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVP----NLGGGVA 501
Query: 482 VASGGQHSVIL 492
VA+G HS++L
Sbjct: 502 VAAGENHSLVL 512
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 222/489 (45%), Gaps = 70/489 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + + L V V G ++ + DG V+ WG N
Sbjct: 264 GTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGN 323
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
GALG + +P V V + A SH++A+ DGTV+AWG + +G +G
Sbjct: 324 SYGALGNDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGG--NHYGQLGD 381
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ + ++ +SG++ +A+ +H + + S + G +GQLG T R
Sbjct: 382 GTTSERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTR------ 435
Query: 217 RRGMSFLEPGEVPL---KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
RR EVP+ K + V G Y++ + G++ A+G N Y Q+G+ +
Sbjct: 436 RR--------EVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSR 487
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
K+ P + +L +A+G++HSL L S+G ++A+G + YG+LG +
Sbjct: 488 KA-------PVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLG-----NGI 533
Query: 333 TEPTPIPSLQDKTIT---SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
T +P+P +Q + ++ ++A G S A+ S+G ++ WG+ QLG+G D
Sbjct: 534 TSDSPVP-VQVQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVR 592
Query: 384 --------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
++ S+G ++A+G + G++G V P + L +
Sbjct: 593 VQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG 652
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
++A G S A+ S+G ++ WG LG+G D P++ +G VA
Sbjct: 653 --MAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQAQGLT----GARAVA 706
Query: 484 SGGQHSVIL 492
+G HS++L
Sbjct: 707 AGESHSLVL 715
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 185/409 (45%), Gaps = 59/409 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ER V+ L V+ V H++ + D V+ WG N
Sbjct: 366 GTVWAWGGNHYGQLGDG-TTSERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRN 424
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
EG LG +G + V +PK V ++AG HS+A+ DGTV+AWG + +G +
Sbjct: 425 YEGQLG---DGTTRRREVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGD--NEYGQV 479
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSAS 213
G E +K P+++ ++ G V +A+G +H ++L S G + G GQLG IT S
Sbjct: 480 GDGTETSRKAPVRVPNLGGGVAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV 539
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE---ADSE 270
+G+S G V + Y+ + S G++ A+GLN QLG+ +DS
Sbjct: 540 PVQVQGLS----GGVAVAAGQY-------YSLAVRSDGTVWAWGLNFEGQLGDGTASDSP 588
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
V P ++ +A+G H+L + S+G ++A+G + G++G
Sbjct: 589 V----------PVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRR 638
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
V P + L + ++A G S A+ S+G ++ WG LG+G D
Sbjct: 639 RVLMPVQVQGLSEGM--AVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQA 696
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
+L S+G +A G + G++G ++ V+ PT
Sbjct: 697 QGLTGARAVAAGESHSLVLRSDGTGWAMGSNASGQIGDGGPTQQVSTPT 745
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 197/443 (44%), Gaps = 71/443 (16%)
Query: 52 LGPDVMERKTFALVE--DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS 109
LG D +E + V+ L V VV H + + DG V+ WG N G LG +
Sbjct: 328 LGNDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGGNHYGQLG-DGTTSE 386
Query: 110 EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
+ V + ++A HS+A+ D TV+AWG R+ G +G ++ P+ +
Sbjct: 387 RLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWG--RNYEGQLGDGTTRRREVPVPVP 444
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+S +V +A+G H + + G + G E GQ+G T+ SR A P VP
Sbjct: 445 KLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTE--TSRKA--------PVRVP 494
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE---ADSEVQKSGNTCFFTPHLIK 286
+ ++ + S G++ A+G N+Y QLG +DS V P ++
Sbjct: 495 NLGGGVAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV----------PVQVQ 544
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKT 345
LS +A+GQ++SLA+ S+G ++A+G + G+LG S+ PV +P L
Sbjct: 545 GLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGGV 602
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
++A G + + S+G ++ WG Q+G G
Sbjct: 603 --AVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEGMAVAAGYN 660
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT---SIACGNCVSFA 437
+ S+G ++A+G + G LG + T+ +P +Q + +T ++A G S
Sbjct: 661 HSLAVRSDGSVWAWGGNTAGVLG-----DGTTDRRTVP-VQAQGLTGARAVAAGESHSLV 714
Query: 438 IDSEGVLYGWGMGNGY--QLGNG 458
+ S+G GW MG+ Q+G+G
Sbjct: 715 LRSDGT--GWAMGSNASGQIGDG 735
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 179/400 (44%), Gaps = 60/400 (15%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ +I+ G +HS A+ DGTV+A G + G +G ++ P++++ +SG+V +A
Sbjct: 46 RARARIATGANHSWAVRPDGTVWAVG--ENVFGQLGDGTTSERRVPVQVQGLSGVVAVAV 103
Query: 180 GADHFVMLTSRGNLLTAGCPE-QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
GA H + L S G + G QG G + + P VP +
Sbjct: 104 GAYHSLALRSDGTVWAVGRAACQGGDGTASDCTV------------PAPVPGLSGGVAVA 151
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G+++ + S G++ A+G N QLG+ + V P +K L+ +A+
Sbjct: 152 AGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNVS-------LVPVRVKKLT--GVVAVAA 202
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G+ HSLA+ S+G ++ +G + YG LG S + P+ ++A G S A
Sbjct: 203 GEKHSLAVRSDGTVWTWGFNGYGALGDGTTS---SRKVPVQVQGLSGGVAVAGGVYHSLA 259
Query: 359 IDSEGVLYGWGMGNGYQLGNGKE-------------------------DDILNSEGKIYA 393
+ S+G ++GWG QLG+G + +G ++A
Sbjct: 260 VRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWA 319
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + YG LG + T P +P L ++ + + A+ S+G ++ WG GN Y
Sbjct: 320 WGGNSYGALGNDTIETMSTVPVQVPGLSGG--VTVVAASSHALAVRSDGTVWAWG-GNHY 376
Query: 454 -QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G + L + ++G V+ VA+ +HS+ +
Sbjct: 377 GQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAV 412
>gi|317027708|ref|XP_001399882.2| Ran exchange factor Prp20/Pim1 [Aspergillus niger CBS 513.88]
Length = 525
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 179/375 (47%), Gaps = 76/375 (20%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--------EAEGD-------------- 108
VV++ +GG+H+ LT D K+ TWG NDEG LGR E GD
Sbjct: 125 VVQLAIGGVHSAALTHDNKILTWGVNDEGTLGRDTKEERKVEENGDGVNGDDAKEESDSD 184
Query: 109 ----------SEFIPQTVN---LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
E P V+ P+ V QI+A DS + AL ++G VY WG+FR S+G
Sbjct: 185 SDDDEVDLNMKEATPTAVDSALFPEGTVFTQITATDSATFALTQEGRVYGWGTFRGSNGV 244
Query: 154 MGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RITQRS 211
+G E IQ+ P+ + + + +ASGA H + LT++G +LT GC EQ QLG RI+ R
Sbjct: 245 IGFSPETKIQRQPVLVPGLEKVTHLASGAQHVLALTAKGAVLTWGCEEQNQLGRRISGRL 304
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL------ 264
+ + L PG+ L + + TG Y++F + G + A+G NN+ Q
Sbjct: 305 HGK-----LESLIPGQCALP-SDVVSIGTGSYHSFAVRKNGRVHAWGSNNFGQTAVPMSA 358
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
GE+D+ V P +KS K + G+ HS+A+ +GK ++GR D L
Sbjct: 359 GESDAVV--------LYPTEVKSFRKHGKIISICGGKDHSVAVTEDGKCLSWGRVDNKAL 410
Query: 324 GLKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G+ P +T PTP+ ++++ + + A + SFAI +G Y WG
Sbjct: 411 GIPLADMPSDELVHDEHGRPRILTVPTPLTDIKEEVVFATASSDH-SFAITKDGQAYSWG 469
Query: 370 MGNGYQLGNGKEDDI 384
Q G+ D++
Sbjct: 470 FNVQRQAGHRDVDEV 484
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 44 QGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
+G G +G P+ ++ LV L+ V + G H + LT G V TWGC ++ LGR
Sbjct: 239 RGSNGVIGFSPETKIQRQPVLVPGLEKVTHLASGAQHVLALTAKGAVLTWGCEEQNQLGR 298
Query: 104 EAEGD-----SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-- 156
G IP LP V I G HS A+ ++G V+AWGS ++ +
Sbjct: 299 RISGRLHGKLESLIPGQCALPSDVVSIGTGSYHSFAVRKNGRVHAWGSNNFGQTAVPMSA 358
Query: 157 -KGEGIQKTPLKLESVS---GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ + + P +++S I+ I G DH V +T G L+ G + LG
Sbjct: 359 GESDAVVLYPTEVKSFRKHGKIISICGGKDHSVAVTEDGKCLSWGRVDNKALG 411
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 113/338 (33%), Gaps = 71/338 (21%)
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
+A Q R S G + P V K+K V N + + +
Sbjct: 33 SASAKPQASRKRKAADSVEETTTSGAAPAAPARVTKKQKEA----LAVINHAPTQRLDVY 88
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG N Y +LG D+ + P L LA G HS AL + KI
Sbjct: 89 VFGTNCYGELGLGDATKKSEIPGPVLNPKL--PAESVGVVQLAIGGVHSAALTHDNKILT 146
Query: 315 FGRHDYGRLGLKNVSEPVTE--------------------------------PTPIPSL- 341
+G +D G LG E E PT + S
Sbjct: 147 WGVNDEGTLGRDTKEERKVEENGDGVNGDDAKEESDSDSDDDEVDLNMKEATPTAVDSAL 206
Query: 342 --QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+ T I + +FA+ EG +YGWG G
Sbjct: 207 FPEGTVFTQITATDSATFALTQEGRVYGWGTFRGSN------------------------ 242
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--- 456
G +G ++ +P +P L+ +T +A G A+ ++G + WG QLG
Sbjct: 243 GVIGFSPETKIQRQPVLVPGLEK--VTHLASGAQHVLALTAKGAVLTWGCEEQNQLGRRI 300
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G+ LE + I G+ V+ + +G HS + K
Sbjct: 301 SGRLHGKLESL-IPGQCALPSDVVSIGTGSYHSFAVRK 337
>gi|350634707|gb|EHA23069.1| hypothetical protein ASPNIDRAFT_207002 [Aspergillus niger ATCC
1015]
Length = 524
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 179/375 (47%), Gaps = 76/375 (20%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--------EAEGD-------------- 108
VV++ +GG+H+ LT D K+ TWG NDEG LGR E GD
Sbjct: 124 VVQLAIGGVHSAALTHDNKILTWGVNDEGTLGRDTKEERKVEENGDGVNGDDAKEESDSD 183
Query: 109 ----------SEFIPQTVN---LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
E P V+ P+ V QI+A DS + AL ++G VY WG+FR S+G
Sbjct: 184 SDDDEVDLNMKEATPTAVDSALFPEGTVFTQITATDSATFALTQEGRVYGWGTFRGSNGV 243
Query: 154 MGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RITQRS 211
+G E IQ+ P+ + + + +ASGA H + LT++G +LT GC EQ QLG RI+ R
Sbjct: 244 IGFSPETKIQRQPVLVPGLEKVTHLASGAQHVLALTAKGAVLTWGCEEQNQLGRRISGRL 303
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL------ 264
+ + L PG+ L + + TG Y++F + G + A+G NN+ Q
Sbjct: 304 HGK-----LESLIPGQCALP-SDVVSIGTGSYHSFAVRKNGRVHAWGSNNFGQTAVPMSA 357
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
GE+D+ V P +KS K + G+ HS+A+ +GK ++GR D L
Sbjct: 358 GESDAVV--------LYPTEVKSFRKHGKIISICGGKDHSVAVTEDGKCLSWGRVDNKAL 409
Query: 324 GLKNVSEP--------------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G+ P +T PTP+ ++++ + + A + SFAI +G Y WG
Sbjct: 410 GIPLADMPSDELVHDEHGRPRILTVPTPLTDIKEEVVFATASSDH-SFAITKDGQAYSWG 468
Query: 370 MGNGYQLGNGKEDDI 384
Q G+ D++
Sbjct: 469 FNVQRQAGHRDVDEV 483
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 44 QGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
+G G +G P+ ++ LV L+ V + G H + LT G V TWGC ++ LGR
Sbjct: 238 RGSNGVIGFSPETKIQRQPVLVPGLEKVTHLASGAQHVLALTAKGAVLTWGCEEQNQLGR 297
Query: 104 EAEGD-----SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-- 156
G IP LP V I G HS A+ ++G V+AWGS ++ +
Sbjct: 298 RISGRLHGKLESLIPGQCALPSDVVSIGTGSYHSFAVRKNGRVHAWGSNNFGQTAVPMSA 357
Query: 157 -KGEGIQKTPLKLESVS---GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ + + P +++S I+ I G DH V +T G L+ G + LG
Sbjct: 358 GESDAVVLYPTEVKSFRKHGKIISICGGKDHSVAVTEDGKCLSWGRVDNKALG 410
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 114/338 (33%), Gaps = 72/338 (21%)
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
+A Q R S G + P V K+K + V N + + +
Sbjct: 33 SASAKPQASRKRKAADSVEETTTSGAAPAAPARVTKKQKAL-----AVINHAPTQRLDVY 87
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG N Y +LG D+ + P L LA G HS AL + KI
Sbjct: 88 VFGTNCYGELGLGDATKKSEIPGPVLNPKL--PAESVGVVQLAIGGVHSAALTHDNKILT 145
Query: 315 FGRHDYGRLGLKNVSEPVTE--------------------------------PTPIPSL- 341
+G +D G LG E E PT + S
Sbjct: 146 WGVNDEGTLGRDTKEERKVEENGDGVNGDDAKEESDSDSDDDEVDLNMKEATPTAVDSAL 205
Query: 342 --QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+ T I + +FA+ EG +YGWG G
Sbjct: 206 FPEGTVFTQITATDSATFALTQEGRVYGWGTFRGSN------------------------ 241
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--- 456
G +G ++ +P +P L+ +T +A G A+ ++G + WG QLG
Sbjct: 242 GVIGFSPETKIQRQPVLVPGLEK--VTHLASGAQHVLALTAKGAVLTWGCEEQNQLGRRI 299
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G+ LE + I G+ V+ + +G HS + K
Sbjct: 300 SGRLHGKLESL-IPGQCALPSDVVSIGTGSYHSFAVRK 336
>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 775
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 229/491 (46%), Gaps = 78/491 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G ER+ V+ L VV V VG H++ L DG V+
Sbjct: 90 GTVWAVGENVFGQLGDG-TTSERRVPVQVQGLSGVVAVAVGAYHSLALRSDGTVW----- 143
Query: 97 DEGALGREA--EGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
A+GR A GD TV P V ++AG HS+AL DGTV+AWGS +
Sbjct: 144 ---AVGRAACQGGDGTASDCTVPAPVPGLSGGVAVAAGGLHSLALRSDGTVWAWGS--NF 198
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G + P++++ ++G+V +A+G H + + S G + T G G LG T
Sbjct: 199 EGQLGDGTTNVSLVPVRVKKLTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGT-- 256
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDD---VFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
++SR +VP++ + + V GVY++ + S G++ +G N QLG+
Sbjct: 257 TSSR------------KVPVQVQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANGVGQLGD 304
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ P + LS + +A+G SLA+ +G ++A+G + YG LG
Sbjct: 305 GTPMRR------VLVPVQAQGLSGVE--AVAAGHSLSLAVRFDGTVWAWGGNSYGALGND 356
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDIL 385
+ T P +P L +T +A + + A+ S+G ++ WG GN Y QLG+G + L
Sbjct: 357 TIETMSTVPVQVPGLSGG-VTVVAA-SSHALAVRSDGTVWAWG-GNHYGQLGDGTTSERL 413
Query: 386 ------------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
S+ ++A+GR+ G+LG + P P+P L
Sbjct: 414 VAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLG-DGTTRRREVPVPVPKL- 471
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
++ ++A G S A+ +G ++ WG Q+G+G E P+++ N +
Sbjct: 472 -SSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVP----NLGGGVA 526
Query: 482 VASGGQHSVIL 492
VA+G HS++L
Sbjct: 527 VAAGENHSLVL 537
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 222/489 (45%), Gaps = 70/489 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + + L V V G ++ + DG V+ WG N
Sbjct: 289 GTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGN 348
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
GALG + +P V V + A SH++A+ DGTV+AWG + +G +G
Sbjct: 349 SYGALGNDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGG--NHYGQLGD 406
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ + ++ +SG++ +A+ +H + + S + G +GQLG T R
Sbjct: 407 GTTSERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTR------ 460
Query: 217 RRGMSFLEPGEVPL---KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
RR EVP+ K + V G Y++ + G++ A+G N Y Q+G+ +
Sbjct: 461 RR--------EVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSR 512
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
K+ P + +L +A+G++HSL L S+G ++A+G + YG+LG +
Sbjct: 513 KA-------PVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLG-----NGI 558
Query: 333 TEPTPIPSLQDKTIT---SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
T +P+P +Q + ++ ++A G S A+ S+G ++ WG+ QLG+G D
Sbjct: 559 TSDSPVP-VQVQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVR 617
Query: 384 --------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
++ S+G ++A+G + G++G V P + L +
Sbjct: 618 VQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG 677
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
++A G S A+ S+G ++ WG LG+G D P++ +G VA
Sbjct: 678 --MAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQAQGLT----GARAVA 731
Query: 484 SGGQHSVIL 492
+G HS++L
Sbjct: 732 AGESHSLVL 740
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 185/409 (45%), Gaps = 59/409 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ER V+ L V+ V H++ + D V+ WG N
Sbjct: 391 GTVWAWGGNHYGQLGDG-TTSERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRN 449
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
EG LG +G + V +PK V ++AG HS+A+ DGTV+AWG + +G +
Sbjct: 450 YEGQLG---DGTTRRREVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGD--NEYGQV 504
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSAS 213
G E +K P+++ ++ G V +A+G +H ++L S G + G GQLG IT S
Sbjct: 505 GDGTETSRKAPVRVPNLGGGVAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV 564
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE---ADSE 270
+G+S G V + Y+ + S G++ A+GLN QLG+ +DS
Sbjct: 565 PVQVQGLS----GGVAVAAGQY-------YSLAVRSDGTVWAWGLNFEGQLGDGTASDSP 613
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
V P ++ +A+G H+L + S+G ++A+G + G++G
Sbjct: 614 V----------PVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRR 663
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
V P + L + ++A G S A+ S+G ++ WG LG+G D
Sbjct: 664 RVLMPVQVQGLSEGM--AVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQA 721
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
+L S+G +A G + G++G ++ V+ PT
Sbjct: 722 QGLTGARAVAAGESHSLVLRSDGTGWAMGSNASGQIGDGGPTQQVSTPT 770
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 197/443 (44%), Gaps = 71/443 (16%)
Query: 52 LGPDVMERKTFALVE--DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS 109
LG D +E + V+ L V VV H + + DG V+ WG N G LG +
Sbjct: 353 LGNDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGGNHYGQLG-DGTTSE 411
Query: 110 EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
+ V + ++A HS+A+ D TV+AWG R+ G +G ++ P+ +
Sbjct: 412 RLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWG--RNYEGQLGDGTTRRREVPVPVP 469
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+S +V +A+G H + + G + G E GQ+G T+ SR A P VP
Sbjct: 470 KLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTE--TSRKA--------PVRVP 519
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE---ADSEVQKSGNTCFFTPHLIK 286
+ ++ + S G++ A+G N+Y QLG +DS V P ++
Sbjct: 520 NLGGGVAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV----------PVQVQ 569
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKT 345
LS +A+GQ++SLA+ S+G ++A+G + G+LG S+ PV +P L
Sbjct: 570 GLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGGV 627
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
++A G + + S+G ++ WG Q+G G
Sbjct: 628 --AVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEGMAVAAGYN 685
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT---SIACGNCVSFA 437
+ S+G ++A+G + G LG + T+ +P +Q + +T ++A G S
Sbjct: 686 HSLAVRSDGSVWAWGGNTAGVLG-----DGTTDRRTVP-VQAQGLTGARAVAAGESHSLV 739
Query: 438 IDSEGVLYGWGMGNGY--QLGNG 458
+ S+G GW MG+ Q+G+G
Sbjct: 740 LRSDGT--GWAMGSNASGQIGDG 760
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 181/400 (45%), Gaps = 60/400 (15%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ +I+ G +HS A+ DGTV+A G + G +G ++ P++++ +SG+V +A
Sbjct: 71 RARARIATGANHSWAVRPDGTVWAVG--ENVFGQLGDGTTSERRVPVQVQGLSGVVAVAV 128
Query: 180 GADHFVMLTSRGNLLTAGCPE-QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
GA H + L S G + G QG G + + P VP +
Sbjct: 129 GAYHSLALRSDGTVWAVGRAACQGGDGTASDCTV------------PAPVPGLSGGVAVA 176
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G+++ + S G++ A+G N QLG+ + V P +K L+ +A+
Sbjct: 177 AGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNVS-------LVPVRVKKLT--GVVAVAA 227
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G+ HSLA+ S+G ++ +G + YG LG S + P+ ++A G S A
Sbjct: 228 GEKHSLAVRSDGTVWTWGFNGYGALGDGTTS---SRKVPVQVQGLSGGVAVAGGVYHSLA 284
Query: 359 IDSEGVLYGWGMGNGYQLGNGKE-------------------------DDILNSEGKIYA 393
+ S+G ++GWG QLG+G + +G ++A
Sbjct: 285 VRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWA 344
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + YG LG + T P +P L +T +A + + A+ S+G ++ WG GN Y
Sbjct: 345 WGGNSYGALGNDTIETMSTVPVQVPGLSGG-VTVVAA-SSHALAVRSDGTVWAWG-GNHY 401
Query: 454 -QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G + L + ++G V+ VA+ +HS+ +
Sbjct: 402 GQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAV 437
>gi|198472041|ref|XP_002133323.1| GA28084 [Drosophila pseudoobscura pseudoobscura]
gi|198139579|gb|EDY70725.1| GA28084 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 167/327 (51%), Gaps = 56/327 (17%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE---AEGDSEFIPQTVNLPKK 121
++++ + V+V GG H++ LT G VY++GCN EGALGR +E SE +P V+LP K
Sbjct: 37 IQNIPDPVDVSAGGQHSLVLTRSGDVYSFGCNGEGALGRSTSSSEPGSESLPAVVDLPGK 96
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
A+ I+AG SHS LL +G+VYAWGSFR L +GI P ++ + + IASG
Sbjct: 97 ALCITAGGSHSACLLANGSVYAWGSFR-------LTIDGIALKPTQILAGTECCSIASGR 149
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFT 240
+H V+L++RG + T GC E QL I +RS L P ++ ++ + + ++T
Sbjct: 150 NHLVVLSTRGKVYTMGCAEHRQLRSIQKRSV----------LRPNQIKIRSANPFNAIWT 199
Query: 241 GVYNTFI--SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
F+ S +I A LNN F P IK+ + K T +A
Sbjct: 200 TNTCCFLRESQTETIWAADLNNCQH----------------FAP--IKT-TLKDVTQIAG 240
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +L L G + +GL E V++ P+ +L+ I S+ACG+ S+A
Sbjct: 241 GDLDTLMLQ--------GNRLFSVVGL---GESVSQLAPVRNLESSNIVSVACGDVCSYA 289
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDIL 385
I +G+LY WG + GK+D +
Sbjct: 290 ITEDGLLYSWGTDSSKA---GKDDQAI 313
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 151/339 (44%), Gaps = 39/339 (11%)
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
+++++ V +++G H ++LT G++ + GC +G LGR T S+S + P
Sbjct: 36 EIQNIPDPVDVSAGGQHSLVLTRSGDVYSFGCNGEGALGRST--SSSEPGSESL----PA 89
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
V L K + G ++ + + GS+ A+G + G A Q
Sbjct: 90 VVDLPGKALCITAGGSHSACLLANGSVYAWGSFRLTIDGIALKPTQI------------- 136
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKT 345
L+ + +ASG++H + L++ GK+Y G ++ +L +++ + V P I
Sbjct: 137 -LAGTECCSIASGRNHLVVLSTRGKVYTMGCAEHRQL--RSIQKRSVLRPNQIKIRSANP 193
Query: 346 ITSIACGNCVSFAIDSEG-VLYGWGMGNGYQLGNGKE--DDILNSEG----KIYAFGRHD 398
+I N F +S+ ++ + N K D+ G + G
Sbjct: 194 FNAIWTTNTCCFLRESQTETIWAADLNNCQHFAPIKTTLKDVTQIAGGDLDTLMLQGNRL 253
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ +GL E V++ P+ +L+ I S+ACG+ S+AI +G+LY WG + G
Sbjct: 254 FSVVGL---GESVSQLAPVRNLESSNIVSVACGDVCSYAITEDGLLYSWGTDSSKA---G 307
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
K+D + +++ + N +L ++ H++ LA+ P
Sbjct: 308 KDD---QAIRVISRNTANKKLLLASATAWHALFLAQVNP 343
>gi|6321341|ref|NP_011418.1| Srm1p [Saccharomyces cerevisiae S288c]
gi|132174|sp|P21827.1|RCC1_YEAST RecName: Full=Guanine nucleotide exchange factor SRM1; AltName:
Full=Pheromone response pathway component SRM1; AltName:
Full=Pre-mRNA-processing protein 20; AltName:
Full=Regulator of chromosome condensation; AltName:
Full=Suppressor of receptor mutations 1; AltName:
Full=mRNA transport protein 1
gi|666950|gb|AAA62268.1| suppressor [Saccharomyces cerevisiae]
gi|1322633|emb|CAA96803.1| SRM1 [Saccharomyces cerevisiae]
gi|256269707|gb|EEU04977.1| Srm1p [Saccharomyces cerevisiae JAY291]
gi|259146410|emb|CAY79667.1| Srm1p [Saccharomyces cerevisiae EC1118]
gi|285812109|tpg|DAA08009.1| TPA: Srm1p [Saccharomyces cerevisiae S288c]
gi|323333670|gb|EGA75063.1| Srm1p [Saccharomyces cerevisiae AWRI796]
gi|392299165|gb|EIW10259.1| Srm1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 482
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 181/398 (45%), Gaps = 64/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDD 383
S+A G+ S A+ G+ Y WG G Y +G G EDD
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 434
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 48 IFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 218
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 275
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVG 455
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 456 CGGQFSV 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 266
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 267 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 319
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 320 KPKRLALPDNVVIRSIAAGEHHSLILSQ 347
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 229/528 (43%), Gaps = 103/528 (19%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G+ +GQLG G + +R + V+ L V V G H+ L + G V+TWG N
Sbjct: 140 GTVWTWGRNSSGQLGDGTSI-QRFSPVQVQGLTGVTAVAAGRNHSAALGQGGTVWTWGDN 198
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + P V + ISA DS +VAL +DGTV+AWG+ +S G +G
Sbjct: 199 LVGQLG-DGTSTQRLTPVQVQGLTGVIAISANDSETVALRQDGTVWAWGN--NSSGQLGD 255
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
++ TP+++ ++G+ IA+G V L G L G +GQLG T + R
Sbjct: 256 GTTTVRFTPVQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYR-- 313
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P +V +G++ + G++ A+G N+ QLG+ + V+
Sbjct: 314 --------PEQVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVR---- 361
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
FTP ++ L+ T +A+G +++A +G ++A+G +++G+LG + +T P
Sbjct: 362 ---FTPVQVQGLT--GVTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLT-PV 415
Query: 337 PIPSL-----------------QDKT-------------------------------ITS 348
+ L QD T IT+
Sbjct: 416 QVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEGITA 475
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN---------------------- 386
IA N ++ A+ +G ++ WG QLG+G L
Sbjct: 476 IAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTAVAASDYHLVA 535
Query: 387 --SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+G ++A+G +G+LG + TP+ +T+IA G+ + A+ +G +
Sbjct: 536 VRQDGTVWAWGVGFWGQLG---DGTGMDRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTV 592
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ WG N QLG+G L P+++ G + +A+GG H+V L
Sbjct: 593 WAWGFNNYGQLGDGTTAGHLTPVQVPGVT----GAVAIAAGGSHTVAL 636
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 219/480 (45%), Gaps = 61/480 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G GQLG G M+R T V+ L V + G HTV L +DG V+ WG N
Sbjct: 540 GTVWAWGVGFWGQLGDGTG-MDRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFN 598
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ G LG + P V AV I+AG SH+VALL+DGTV+ WG + G +G
Sbjct: 599 NYGQLG-DGTTAGHLTPVQVPGVTGAVAIAAGGSHTVALLQDGTVWTWG--YNIWGQLGD 655
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASR 214
+ +P++++ ++ ++ IA+ H V + G + T G GQL G TQR
Sbjct: 656 GTTTHRHSPVQVQGLADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQR---- 711
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
L P +V + + + ++ A+G N++ QLG+ +
Sbjct: 712 --------LTPVQVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTT----- 758
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T TP ++ L D T +A+G +H A +G ++ +G + YG+LG +S +
Sbjct: 759 --TRRLTPVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL- 813
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN-------- 386
P + L T T+IA G+ + A+ +G ++ WG QLG+G L
Sbjct: 814 PVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQG 873
Query: 387 ------------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
+G ++ +G + YG+LG +S + P + L D +T++
Sbjct: 874 LMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL-PVQVQGLMD--VTAM 930
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
A G A +G L+ WG+ + QLG G L P++++G +V +A+GG H
Sbjct: 931 AAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGL----MSVTAMAAGGYH 986
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 194/435 (44%), Gaps = 57/435 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + T G GQLG GP + V+ L V + G HT+ + +DG V++WG
Sbjct: 994 GTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGG 1053
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG S P V ISAGD+H+VAL DGTV+AWG R+S G +G
Sbjct: 1054 NAYGQLGDGTTAQS-LTPVQVQGLTGVTAISAGDAHTVALRRDGTVWAWG--RNSWGQLG 1110
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASR 214
+ TP++++ ++G++ IA+G+ H V L G + G GQLG T A+
Sbjct: 1111 DGTTTHRATPVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATP 1170
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
+G++ G + + + V + G++ A+G N+ QLG+ +
Sbjct: 1171 VQVQGLT----GVIAIAAGSLHTVA-------LRQDGTVWAWGFNDLGQLGDGTT----- 1214
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T TP ++ L+ T +A+G H+ A+ +G + +G + +G+LG ++
Sbjct: 1215 --TRRLTPAQVQGLT--GVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTD---R 1267
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
TP+ ++++A G + + +G ++ WG +G QLGNG D
Sbjct: 1268 ATPVQVQGLTGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTD----------- 1316
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
TP+ S+A G + A+ +G +GWG N Q
Sbjct: 1317 ------------------RSTPVQVEALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQ 1358
Query: 455 LGNGKEDDILEPMKI 469
+G+G D P+ +
Sbjct: 1359 VGDGTTADRPTPVNV 1373
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 232/550 (42%), Gaps = 108/550 (19%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
P+ V TL + G V G D GQLG D + F+ V+ + +
Sbjct: 72 PAGPVLAAGNGNHTLAVRQDG-TVWAWGNNDDGQLG---DGTTTRRFSPVQVMTGATAIA 127
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGAL---------------------------------- 101
G HTV ++DG V+TWG N G L
Sbjct: 128 AGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTAVAAGRNHSAALG 187
Query: 102 -------------GREAEGDS--EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G+ +G S P V + ISA DS +VAL +DGTV+AWG+
Sbjct: 188 QGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGVIAISANDSETVALRQDGTVWAWGN 247
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+S G +G ++ TP+++ ++G+ IA+G V L G L G +GQLG
Sbjct: 248 --NSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGN 305
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
T + R P +V +G++ + G++ A+G N+ QLG+
Sbjct: 306 GTTFGSYR----------PEQVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGD 355
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ V+ FTP ++ L+ T +A+G +++A +G ++A+G +++G+LG
Sbjct: 356 GTTTVR-------FTPVQVQGLT--GVTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDG 406
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--- 383
+ +T P + L +T+IA G + A +G ++ WG QLG G
Sbjct: 407 TTTRRLT-PVQVQGLTG--VTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHT 463
Query: 384 ---------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
+ +G ++A+G + G+LG + +T P + L
Sbjct: 464 PGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLT-PVQVQGLAG 522
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
+T++A + A+ +G ++ WG+G QLG+G D P++++G L T +
Sbjct: 523 --VTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQG--LTGVTA--I 576
Query: 483 ASGGQHSVIL 492
A+G H+V L
Sbjct: 577 AAGSNHTVAL 586
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 208/476 (43%), Gaps = 65/476 (13%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
GQLG G R T V+ L +V + GG H +DG ++TWG N G LG
Sbjct: 751 GQLGDGT-TTRRLTPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPL- 808
Query: 108 DSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP 165
+P V A I+AGDSH+VA+ +DGTV+AWGS G + +
Sbjct: 809 SYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQ 868
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
++++ + + +A+G H G L T G GQLG L
Sbjct: 869 VQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGG--------------GPLSY 914
Query: 226 GEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
+P++ + + DV G + G++ +GLN+Y QLG +
Sbjct: 915 RLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYR-------LL 967
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P ++ L T +A+G +H A +G ++ +G + YG+LG +S+ +T P +
Sbjct: 968 PVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLT-PVQVQVQ 1024
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDD----------------- 383
+ +IA G + A+ +G ++ WG GN Y QLG+G
Sbjct: 1025 GLTGVAAIAAGFSHTLAVRQDGTVWSWG-GNAYGQLGDGTTAQSLTPVQVQGLTGVTAIS 1083
Query: 384 -------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
L +G ++A+GR+ +G+LG + TP+ + +IA G+ +
Sbjct: 1084 AGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTH---RATPVQVQGLTGVIAIAAGSLHTV 1140
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
A+ +G ++ WG + QLG+G P++++G V+ +A+G H+V L
Sbjct: 1141 ALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT----GVIAIAAGSLHTVAL 1192
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 217/487 (44%), Gaps = 63/487 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G +GQLG G + V+ L +V + GG H +DG ++TWG
Sbjct: 842 GTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGL 901
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG +P V ++AG H A +DGT++ WG +S+G +G
Sbjct: 902 NSYGQLGGGPL-SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWG--LNSYGQLG 958
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSAS 213
+ P++++ + + +A+G H G L T G GQLG ++Q
Sbjct: 959 GGPLSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQS--- 1015
Query: 214 RNARRGMSFLEPGEVPLK-RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
L P +V ++ + + G +T + G++ ++G N Y QLG D
Sbjct: 1016 ---------LTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLG--DGTT 1064
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+S TP ++ L+ T +++G H++AL +G ++A+GR+ +G+LG +
Sbjct: 1065 AQS-----LTPVQVQGLT--GVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTH- 1116
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
TP+ + +IA G+ + A+ +G ++ WG + QLG+G
Sbjct: 1117 --RATPVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQ 1174
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L +G ++A+G +D G+LG + +T P + L +T+
Sbjct: 1175 GLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLT-PAQVQGLTG--VTT 1231
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IA G + A+ +G + WG QLG+G D P++++G L + L A+G
Sbjct: 1232 IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQG--LTGVSAL--AAGYA 1287
Query: 488 HSVILAK 494
H+V++ +
Sbjct: 1288 HTVVVGE 1294
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 198/437 (45%), Gaps = 59/437 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + T G GQLG GP + R V+ L +V + GG H +DG ++TWG N
Sbjct: 944 GTLWTWGLNSYGQLGGGP-LSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLN 1002
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG S P V + I+AG SH++A+ +DGTV++WG +++G +
Sbjct: 1003 SYGQLGGGPLSQS-LTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGG--NAYGQL 1059
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSAS 213
G TP++++ ++G+ I++G H V L G + G GQLG T A+
Sbjct: 1060 GDGTTAQSLTPVQVQGLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRAT 1119
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
+G++ G + + + V + G++ A+G N++ QLG+ +
Sbjct: 1120 PVQVQGLT----GVIAIAAGSLHTVA-------LRQDGTVWAWGRNSWGQLGDGTT---- 1164
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
T TP ++ L+ +A+G H++AL +G ++A+G +D G+LG + +T
Sbjct: 1165 ---THRATPVQVQGLT--GVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLT 1219
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P + L +T+IA G + A+ +G + WG QLG+G D
Sbjct: 1220 -PAQVQGLTG--VTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTD---------- 1266
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
TP+ ++++A G + + +G ++ WG +G
Sbjct: 1267 -------------------RATPVQVQGLTGVSALAAGYAHTVVVGEDGTVWAWGNNSGT 1307
Query: 454 QLGNGKEDDILEPMKIE 470
QLGNG D P+++E
Sbjct: 1308 QLGNGSSTDRSTPVQVE 1324
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 203/461 (44%), Gaps = 57/461 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G + V+ L V + G+HTV L +DG ++ WG N
Sbjct: 290 GTLWAWGSNSRGQLGNGTTFGSYRP-EQVQGLTGVTAIAASGIHTVALRQDGTLWAWGNN 348
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + F P V I+AG ++VA +DGTV+AWG + G +G
Sbjct: 349 SSGQLG-DGTTTVRFTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGD--NEWGQLGD 405
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASR 214
+ TP++++ ++G+ IA+G + V G + G ++ QLG ++QR
Sbjct: 406 GTTTRRLTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRH--- 462
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
PGEV + + + G++ A+G N QLG+ +
Sbjct: 463 ---------TPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTT----- 508
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T TP ++ L+ T +A+ +H +A+ +G ++A+G +G+LG +
Sbjct: 509 --TRRLTPVQVQGLA--GVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLG---DGTGMDR 561
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN-------- 386
TP+ +T+IA G+ + A+ +G ++ WG N QLG+G L
Sbjct: 562 STPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVT 621
Query: 387 ----------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+G ++ +G + +G+LG + P + L D + +IA
Sbjct: 622 GAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLG-DGTTTHRHSPVQVQGLAD--VIAIAT 678
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
N + A+ +G ++ WG+ + QLG+G L P+++ G
Sbjct: 679 NNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHG 719
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 221/480 (46%), Gaps = 65/480 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G +GQLG G + R T V+ L V + G ++TV +DG V+ WG N
Sbjct: 340 GTLWAWGNNSSGQLGDGTTTV-RFTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDN 398
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ G LG + P V I+AG ++VA +DGTV+AWG + S
Sbjct: 399 EWGQLG-DGTTTRRLTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQ----- 452
Query: 157 KGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSA 212
GEG + TP +++ + GI IA+ V + G + G +GQLG T R
Sbjct: 453 LGEGAVSQRHTPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRL 512
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
+ +G++ + V H+ + G++ A+G+ + QLG+ + +
Sbjct: 513 TPVQVQGLAGVT--AVAASDYHL---------VAVRQDGTVWAWGVGFWGQLGDG-TGMD 560
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+S TP ++ L+ T +A+G +H++AL +G ++A+G ++YG+LG + +
Sbjct: 561 RS------TPVQVQGLT--GVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHL 612
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED---------- 382
T P +P + +IA G + A+ +G ++ WG QLG+G
Sbjct: 613 T-PVQVPGVTGAV--AIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQG 669
Query: 383 --DIL------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
D++ +G ++ +G + G+LG ++ +T P + L D T +I
Sbjct: 670 LADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLT-PVQVHGLTDAT--AI 726
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
+ + A+ + L+ WG + QLG+G L P++++G L + T + A+GG H
Sbjct: 727 LTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQG--LMDVTAM--AAGGYH 782
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 49/284 (17%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGN-----------TCFFTPHLIKSLSDKK 292
N F + G +LA G N++ D V GN T F+P + +
Sbjct: 67 NAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMT----G 122
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
T +A+G +H++A + +G ++ +GR+ G+LG S P + L +T++A G
Sbjct: 123 ATAIAAGIYHTVAASQDGTVWTWGRNSSGQLG-DGTSIQRFSPVQVQGLTG--VTAVAAG 179
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNG------------------------KEDDILNSE 388
S A+ G ++ WG QLG+G E L +
Sbjct: 180 RNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGVIAISANDSETVALRQD 239
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G ++A+G + G+LG + TP+ L +T+IA G + A+ +G L+ WG
Sbjct: 240 GTVWAWGNNSSGQLGDGTTT---VRFTPVQVLGLTGVTAIAAGGGFAVALRQDGTLWAWG 296
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ QLGNG P +++G L T +A+ G H+V L
Sbjct: 297 SNSRGQLGNGTTFGSYRPEQVQG--LTGVTA--IAASGIHTVAL 336
>gi|328850071|gb|EGF99241.1| hypothetical protein MELLADRAFT_45782 [Melampsora larici-populina
98AG31]
Length = 675
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 231/513 (45%), Gaps = 78/513 (15%)
Query: 39 VLTCGQGDTGQLGLGP----DVMERKTFALVEDLDNVVE---------VVVGGMHTVCLT 85
+L G GD GQ+GLG D+ + ALVE+L N + V GGMH++ +
Sbjct: 162 MLMFGSGDMGQMGLGAEKLDDIKKPVLHALVEELKNETKMGKNGGPETVACGGMHSLLID 221
Query: 86 EDGKVYTWGCNDEGALGREAEG----DSEFIPQTVNLPK-----------KAVQISAGDS 130
G++++WG ND ALGR+ EG D E + L + +AV++SAGDS
Sbjct: 222 GLGQIWSWGINDNAALGRKTEGIEGVDQEELESRPMLVEGLVQGSEHQVFRAVRVSAGDS 281
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSG--IVKIASGADHF 184
SVA+ E G AWGSFR + G +G G E Q P ++ ++S + ++ G DH
Sbjct: 282 VSVAVSEKGETRAWGSFRSNDGLLGFDGNIGTEVKQLVPTRVPNLSQYPVSQVVCGYDHV 341
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ LT+ G++ + G +Q QLGR RN L P + L KHI + TG +
Sbjct: 342 LALTTDGHVYSWGNGQQHQLGRKIIERRKRNG------LTPERLNL--KHIVLIGTGGSH 393
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-----KFTMLAS 298
+F ++ G + +GLN QLG +E + P LI+S+S + +
Sbjct: 394 SFAVNQTGLVYGWGLNTRGQLGIGSTE-NSDADEIIPVPTLIESMSPDQHNGARVVAIEG 452
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G HSL L S G+++ G ++ +G+ + + + +
Sbjct: 453 GDFHSLFLLSNGEVWGVGNYENSEIGIPKSHQAILAVEKLRQEGTEKKQEFVSKGLERRK 512
Query: 359 IDSEGVLYGW---GMGNGYQLGNGKEDDI--LNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
I+ EG++ + + + DD+ L ++ A R G+ + P+
Sbjct: 513 IEVEGMIKAYESKAKASDDPDDKPRWDDMAELIEIEQVAANQRFIPGQC----IHTPLKL 568
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ILEPM 467
P P I I+CG + A+D +G Y WG+G +LG GK++D + P
Sbjct: 569 DFPSP------IVDISCGTRHNLAVDDQGNAYSWGLGQSNELGQGKDEDGDDIELVETPK 622
Query: 468 KIEGKQLN--------NYTVLQVASGGQHSVIL 492
K+ K L+ +L+ +GG HS+++
Sbjct: 623 KLTSKALSVDGVNGLGQIKILKCEAGGTHSILI 655
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 42/186 (22%)
Query: 335 PTPIPSLQDKTITSIACGNCV-SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK-IY 392
P P P L + S CGN + SF D L + +E K +
Sbjct: 119 PQPDPLLSEDHRKSERCGNPINSFTFDPHPWL---------------NSSLSTTESKCML 163
Query: 393 AFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTIT-------SIACGNCVSFAIDS 440
FG D G++GL ++ +PV + L+++T ++ACG S ID
Sbjct: 164 MFGSGDMGQMGLGAEKLDDIKKPVLHAL-VEELKNETKMGKNGGPETVACGGMHSLLIDG 222
Query: 441 EGVLYGWGMGNGYQLGN------GKEDDILE--PMKIE----GKQLNNYTVLQVASGGQH 488
G ++ WG+ + LG G + + LE PM +E G + + ++V++G
Sbjct: 223 LGQIWSWGINDNAALGRKTEGIEGVDQEELESRPMLVEGLVQGSEHQVFRAVRVSAGDSV 282
Query: 489 SVILAK 494
SV +++
Sbjct: 283 SVAVSE 288
>gi|326634388|pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces
Cerevisiae And Its Binding Properties To Gsp1p And
Histones
Length = 473
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 181/398 (45%), Gaps = 64/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 31 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 90
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 91 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 150
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 151 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 210
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 211 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 262
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 263 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 319
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 320 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 379
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDD 383
S+A G+ S A+ G+ Y WG G Y +G G EDD
Sbjct: 380 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 417
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 31 IFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 88
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 89 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 148
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 149 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 201
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 202 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 258
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 259 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 318
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 319 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 378
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 379 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVG 438
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 439 CGGQFSV 445
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 149 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 208
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 209 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 249
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 250 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 302
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 303 KPKRLALPDNVVIRSIAAGEHHSLILSQ 330
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 31 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 88
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 89 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 148
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 149 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 184
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 185 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 240
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 241 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 274
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 227/524 (43%), Gaps = 97/524 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +++ T V +L VV V G H++ L+ DG V+ WG N
Sbjct: 55 GTVWAWGFNRQGQLGDGT-LVDSPTPVRVTNLSGVVSVASGDYHSLGLSSDGTVWAWGDN 113
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG S +P V V + +G SH +AL DGTV+AWG R + +G
Sbjct: 114 TAGQLGNGTASASP-VPVRVQNLSGVVSLGSGFSHGLALRSDGTVWAWGDNR--YNQLGN 170
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
G P+++ +SG++ + +G + + L S G + G GQLG TQR+
Sbjct: 171 VGATRSNLPVQVPGLSGVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRA--- 227
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISSKGSILAFGLNNYSQLGEADS- 269
VP++ ++ V G ++T + S GS+ A+G N Y QLG+ +
Sbjct: 228 -------------VPVQVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTT 274
Query: 270 ------------------------EVQKSGNTCFFTPHLIKSLSDKKFT----------- 294
V+ G + + + L D T
Sbjct: 275 SRFQPVQVGLSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQSGLS 334
Query: 295 ---MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
L +G HSL L S+G ++++G + +G+LG P + + L ++
Sbjct: 335 GGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLG-DGTFNPRSSAVKVSWLSLGR-ADVSS 392
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNG-----------------------KEDDILNSE 388
G S +DS G ++ WG QLGNG K +L ++
Sbjct: 393 GQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKAD 452
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
++A+G +++G+LG +++ T P + L +++++ G+ S A+ S G ++ WG
Sbjct: 453 TTVWAWGVNEHGQLGDGTLTDR-TRPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWG 509
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G D L+P+++ G V+ VA+G HS+ L
Sbjct: 510 FNRYGQLGDGTNTDRLQPVQVAGLS----GVVAVAAGDSHSLAL 549
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 212/448 (47%), Gaps = 60/448 (13%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGD 129
+ + +G H+V + DG V+ WG N +G LG DS + NL V +++GD
Sbjct: 37 SAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNL-SGVVSVASGD 95
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
HS+ L DGTV+AWG ++ G +G P++++++SG+V + SG H + L S
Sbjct: 96 YHSLGLSSDGTVWAWGD--NTAGQLGNGTASASPVPVRVQNLSGVVSLGSGFSHGLALRS 153
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
G + G QLG + A+R+ P +VP I V G Y+ + S
Sbjct: 154 DGTVWAWGDNRYNQLGNV---GATRSNL-------PVQVPGLSGVIAVVAGGYYSLALRS 203
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ A+G N Y QLG+ + Q++ P + +LS L++G H++AL S+
Sbjct: 204 DGTVWAWGDNRYGQLGDG-TTTQRA------VPVQVLNLS--GVMNLSAGSFHTVALRSD 254
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++A+G + YG+LG + +P + L D + ++ GN S A+ S+G ++ WG
Sbjct: 255 GSVWAWGFNAYGQLG-DGTTTSRFQPVQV-GLSD--VLTLVAGNYHSLAVRSDGAVWAWG 310
Query: 370 MGNGYQLGNG-----------------------KEDDILNSEGKIYAFGRHDYGRLGLKN 406
QLG+G K +L S+G ++++G + +G+LG
Sbjct: 311 DNRYRQLGDGTTTSSRVPVQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLG-DG 369
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-- 464
P + + L ++ G S +DS G ++ WG QLGNG D L
Sbjct: 370 TFNPRSSAVKVSWLSLGR-ADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA 428
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+ + G + V++G +H+++L
Sbjct: 429 APVGLGGS-------VAVSAGFKHTLVL 449
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 225/521 (43%), Gaps = 94/521 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +R V +L V+ + G HTV L DG V+ WG N
Sbjct: 205 GTVWAWGDNRYGQLGDGT-TTQRAVPVQVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFN 263
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + S F P V L + + AG+ HS+A+ DG V+AWG R + +G
Sbjct: 264 AYGQLG-DGTTTSRFQPVQVGL-SDVLTLVAGNYHSLAVRSDGAVWAWGDNR--YRQLGD 319
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P++ +SG V + +G H ++L S G + + G GQLG T S
Sbjct: 320 GTTTSSRVPVQ-SGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAV 378
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG---------- 265
+ +S+L G DV +G +++ + S G++ A+G N QLG
Sbjct: 379 K--VSWLSLGRA--------DVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA 428
Query: 266 ---------------------EADSEVQKSGN-----------TCFFTPHLIKSLSDKKF 293
+AD+ V G T P + LS
Sbjct: 429 APVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLS--GV 486
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+ +++G +HSLAL S G ++A+G + YG+LG ++ + +P + L + ++A G+
Sbjct: 487 SAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRL-QPVQVAGLSG--VVAVAAGD 543
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGK------------------------EDDILNSEG 389
S A+ S+G ++ WG Q+G+G L S+G
Sbjct: 544 SHSLALRSDGTVWAWGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDG 603
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
++ +G + G+LG + S + +P P+ + S+ GN S + S+G ++ WG
Sbjct: 604 TVWTWGYNGSGQLG--DGSTAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGF 661
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
QLG+G + P+++ G V+ V +G HS+
Sbjct: 662 NFDGQLGDGSLLNRSTPVRVSGLS----GVVSVVAGDYHSL 698
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 56/436 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V + G GQLG G R + V L +V G +H+V L +G V+ WG
Sbjct: 353 GTVWSWGDNVFGQLGDGT-FNPRSSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGD 411
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG DS + V L +V +SAG H++ L D TV+AWG + HG +G
Sbjct: 412 NYSGQLGNGTGLDS-LVAAPVGL-GGSVAVSAGFKHTLVLKADTTVWAWGV--NEHGQLG 467
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ P+++ +SG+ +++G+ H + L S G + G GQLG T N
Sbjct: 468 DGTLTDRTRPVQVAGLSGVSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGT------N 521
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R L+P +V + ++ + S G++ A+G N Q+G+ +
Sbjct: 522 TDR----LQPVQVAGLSGVVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSWR--- 574
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
F P ++ + +++G +HSLAL S+G ++ +G + G+LG + S + +P
Sbjct: 575 ----FLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLG--DGSTAINKP 626
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG 395
P+ + S+ GN S + S+G ++ WG QLG+G +LN
Sbjct: 627 APVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGS---LLN--------- 674
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
TP+ + S+ G+ S A S+G ++ WG QL
Sbjct: 675 -----------------RSTPVRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGEGQL 717
Query: 456 GNGKEDDILEPMKIEG 471
G+G +D L P+ + G
Sbjct: 718 GDGTRNDTLVPVWVLG 733
>gi|134056804|emb|CAK37712.1| unnamed protein product [Aspergillus niger]
Length = 647
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 190/405 (46%), Gaps = 84/405 (20%)
Query: 48 GQLGLGPDVMERKTFA-------LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGA 100
G+LGLG D ++ L + VV++ +GG+H+ LT D K+ TWG NDEG
Sbjct: 96 GELGLG-DATKKSEIPGPVLNPKLPAESVGVVQLAIGGVHSAALTHDNKILTWGVNDEGT 154
Query: 101 LGR--------EAEGD------------------------SEFIPQTVN---LPKKAV-- 123
LGR E GD E P V+ P+ V
Sbjct: 155 LGRDTKEERKVEENGDGVNGDDAKEESDSDSDDDEVDLNMKEATPTAVDSALFPEGTVFT 214
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGAD 182
QI+A DS + AL ++G VY WG+FR S+G +G E IQ+ P+ + + + +ASGA
Sbjct: 215 QITATDSATFALTQEGRVYGWGTFRGSNGVIGFSPETKIQRQPVLVPGLEKVTHLASGAQ 274
Query: 183 HFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H + LT++G +LT GC EQ QLG RI+ R + + L PG+ L + + TG
Sbjct: 275 HVLALTAKGAVLTWGCEEQNQLGRRISGRLHGK-----LESLIPGQCALP-SDVVSIGTG 328
Query: 242 VYNTF-ISSKGSILAFGLNNYSQL------GEADSEVQKSGNTCFFTPHLIKSLSDK-KF 293
Y++F + G + A+G NN+ Q GE+D+ V P +KS K
Sbjct: 329 SYHSFAVRKNGRVHAWGSNNFGQTAVPMSAGESDAVV--------LYPTEVKSFRKHGKI 380
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIP 339
+ G+ HS+A+ +GK ++GR D LG+ P +T PTP+
Sbjct: 381 ISICGGKDHSVAVTEDGKCLSWGRVDNKALGIPLADMPSDELVHDEHGRPRILTVPTPLT 440
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++++ + + A + SFAI +G Y WG Q G+ D++
Sbjct: 441 DIKEEVVFATASSDH-SFAITKDGQAYSWGFNVQRQAGHRDVDEV 484
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 44 QGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
+G G +G P+ ++ LV L+ V + G H + LT G V TWGC ++ LGR
Sbjct: 239 RGSNGVIGFSPETKIQRQPVLVPGLEKVTHLASGAQHVLALTAKGAVLTWGCEEQNQLGR 298
Query: 104 EAEGD-----SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-- 156
G IP LP V I G HS A+ ++G V+AWGS ++ +
Sbjct: 299 RISGRLHGKLESLIPGQCALPSDVVSIGTGSYHSFAVRKNGRVHAWGSNNFGQTAVPMSA 358
Query: 157 -KGEGIQKTPLKLESVS---GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ + + P +++S I+ I G DH V +T G L+ G + LG
Sbjct: 359 GESDAVVLYPTEVKSFRKHGKIISICGGKDHSVAVTEDGKCLSWGRVDNKALG 411
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 113/338 (33%), Gaps = 71/338 (21%)
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
+A Q R S G + P V K+K V N + + +
Sbjct: 33 SASAKPQASRKRKAADSVEETTTSGAAPAAPARVTKKQKEA----LAVINHAPTQRLDVY 88
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG N Y +LG D+ + P L LA G HS AL + KI
Sbjct: 89 VFGTNCYGELGLGDATKKSEIPGPVLNPKL--PAESVGVVQLAIGGVHSAALTHDNKILT 146
Query: 315 FGRHDYGRLGLKNVSEPVTE--------------------------------PTPIPSL- 341
+G +D G LG E E PT + S
Sbjct: 147 WGVNDEGTLGRDTKEERKVEENGDGVNGDDAKEESDSDSDDDEVDLNMKEATPTAVDSAL 206
Query: 342 --QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+ T I + +FA+ EG +YGWG G
Sbjct: 207 FPEGTVFTQITATDSATFALTQEGRVYGWGTFRGSN------------------------ 242
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--- 456
G +G ++ +P +P L+ +T +A G A+ ++G + WG QLG
Sbjct: 243 GVIGFSPETKIQRQPVLVPGLEK--VTHLASGAQHVLALTAKGAVLTWGCEEQNQLGRRI 300
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G+ LE + I G+ V+ + +G HS + K
Sbjct: 301 SGRLHGKLESL-IPGQCALPSDVVSIGTGSYHSFAVRK 337
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 222/484 (45%), Gaps = 59/484 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G + A+V L + V G H++ L G+V+ WG N
Sbjct: 519 GTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVITHVAAGLFHSLALDSSGQVWAWGDN 578
Query: 97 DEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
G LG + S +P V+ LP I AG S+SVAL DG+V+ WG +S+G +G
Sbjct: 579 VYGQLG-DGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWG--ENSNGQLG 635
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ P ++ + +V +++ H V L + G L G GQLG T S S
Sbjct: 636 DGTTTARPVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSES-T 694
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
RR SF + +G+ TF + + G++ A+G N+ QLG +
Sbjct: 695 PRRVPSF----------ARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSA--- 741
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
+P ++++ + LASG H LA++S+G +++FG + G+LG + + T+
Sbjct: 742 ------SPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSA---TQ 792
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-------------- 380
+P + I ++A G S A+ +G ++ WG QLG+G
Sbjct: 793 TSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLA 852
Query: 381 --------EDDIL--NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
D L ++G ++A+G + G+LG + P + L D + ++A
Sbjct: 853 HVVAIAAGSDHALAVRADGTVWAWGANGSGQLG-DGTTTSRAVPMQVKELVD--VVAVAG 909
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ ++G ++ WG QLG+G P+ + L+ V +ASG QHS+
Sbjct: 910 GSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVS--TLSG--VQAIASGAQHSL 965
Query: 491 ILAK 494
LA+
Sbjct: 966 ALAE 969
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 206/462 (44%), Gaps = 58/462 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGG-MHTVCLTEDGKVYTWGC 95
G V G GQLG G R V L ++ +V G ++V L DG V+TWG
Sbjct: 570 GQVWAWGDNVYGQLGDG-STTSRNVPGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGE 628
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG + + +P V+LP V +S SH+VAL G ++AWG R+ G +G
Sbjct: 629 NSNGQLG-DGTTTARPVPARVSLPATLVALSTRGSHTVALDTTGMLWAWG--RNVSGQLG 685
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ TP ++ S + + ASG L + G + G GQLG SAS
Sbjct: 686 NGTLVSESTPRRVPSFARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGN-GATSASPV 744
Query: 216 ARRGMSFLEPGEVPLKR--KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
+ + + P VPL +H+ +SS GS+ +FG N+ QLG S Q
Sbjct: 745 PVQAVGY--PRTVPLASGAQHV---------LAVSSDGSVFSFGSNSRGQLGYEGSATQT 793
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
S P I+++ A+G SLAL+ +G ++A+G + G+LG V+ T
Sbjct: 794 S-PRWLTGPECIEAV--------AAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTAR-T 843
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
P +P L + +IA G+ + A+ ++G ++ WG QLG+G
Sbjct: 844 APARVPGLAH--VVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL 901
Query: 384 --------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ ++G ++A+G + G+LG + T P + +L + +IA
Sbjct: 902 VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLG-DGTTTSRTLPVFVSTLSG--VQAIA 958
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G S A+ GV++ WG QLG+G P+++ G
Sbjct: 959 SGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG 1000
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 213/492 (43%), Gaps = 79/492 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G ++ T V L V V G H++ L E+G V+TWG N
Sbjct: 67 GTVWAWGANAQGQLGEG-STLQHSTPTQVVGLTGVTAVAAGNTHSMALREEGTVWTWGTN 125
Query: 97 DEGALGREAEGDSE-FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
+G LG +G S+ +P V I+AG+ HS+AL+ +G V+AWG+ ++ G +G
Sbjct: 126 TDGQLG---DGVSQRSVPAQVAGLTGVTAIAAGNLHSLALI-NGAVWAWGN--NTTGQLG 179
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ TP K+ ++ +V IA+G H + L G + G GQLG T
Sbjct: 180 DGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGT------- 232
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSK---GSILAFGLNNYSQLGEAD 268
L+ P++ + + G ++ SS G + A+G N Y QLG
Sbjct: 233 -------LDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNG- 284
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
G+ P + L+ + LASG HSLAL + ++A+G + +
Sbjct: 285 ------GDVSSLLPLEVPGLT--QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGT 336
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----- 383
S P + + D ++ACGN S + V GWG QLGNG
Sbjct: 337 SVQRV-PVRVSGVSDA--QALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPG 393
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ ++G ++A+G + YG+LG + V+ P P+ T
Sbjct: 394 RVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTL---VSRPAPV--RLSST 448
Query: 425 ITSIACGNCVSF---AIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEGKQLNNYTVL 480
+TS+ + S+ A+ S+G ++ WG N Y QLG+ P ++ G
Sbjct: 449 LTSVRALSASSYHSLALRSDGTVWAWGD-NAYGQLGDTSGGRRPSPAQVPGVA----GAT 503
Query: 481 QVASGGQHSVIL 492
++A+G HS+ L
Sbjct: 504 EIAAGTYHSLAL 515
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 215/481 (44%), Gaps = 60/481 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G+ GQLG G R A V +V + G HTV L G ++ WG N
Sbjct: 621 GSVWTWGENSNGQLGDG-TTTARPVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRN 679
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG SE P+ V + ++G + AL DGTV+AWG +S G +G
Sbjct: 680 VSGQLGNGTL-VSESTPRRVPSFARVQGFASGLRTTFALRADGTVWAWGD--NSLGQLGN 736
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P++ V +ASGA H + ++S G++ + G +GQLG + SA++ +
Sbjct: 737 GATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGY--EGSATQTS 794
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R ++ E I+ V G +++ +S G + A+G N QLG D V
Sbjct: 795 PRWLTGPE---------CIEAVAAGALFSLALSCDGGVWAWGDNGSGQLG--DGAV---- 839
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
T P + L+ +A+G H+LA+ ++G ++A+G + G+LG + P
Sbjct: 840 -TARTAPARVPGLA--HVVAIAAGSDHALAVRADGTVWAWGANGSGQLG-DGTTTSRAVP 895
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------ 383
+ L D + ++A G+ S A+ ++G ++ WG QLG+G
Sbjct: 896 MQVKELVD--VVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSG 953
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
L G ++A+G + G+LG + T P + L + + G
Sbjct: 954 VQAIASGAQHSLALAEGGVVWAWGANGSGQLG-DGTTTSRTRPVQVSGLSG--VQGLVAG 1010
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S A+ + G ++ WG + QLG+G + +P G L+++ L ++G QH+V+
Sbjct: 1011 ASFSLAL-TPGKVWSWGNNSAGQLGDGTLNSRSQPGA--GPTLSSFVAL--SAGAQHTVV 1065
Query: 492 L 492
L
Sbjct: 1066 L 1066
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 32/217 (14%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
LA+G +HSL + G ++A+G + G+LG + + T PT + L +T++A GN
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHST-PTQVVGLTG--VTAVAAGNTH 109
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE----------------------GKIYA 393
S A+ EG ++ WG QLG+G + ++ G ++A
Sbjct: 110 SMALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALINGAVWA 169
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + G+LG S + P + L + + +IA G+ S A+ +G ++ WG
Sbjct: 170 WGNNTTGQLG-DGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLALKRDGTVWAWGGNYSG 226
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
QLG+G D P+++ G ++ +A GG HSV
Sbjct: 227 QLGDGTLDSRSTPVRVSGLT----GIVALAGGGSHSV 259
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GGVV G +GQLG G R V L V +V G ++ LT GKV++WG
Sbjct: 970 GGVVWAWGANGSGQLGDG-TTTSRTRPVQVSGLSGVQGLVAGASFSLALTP-GKVWSWGN 1027
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
N G LG + +S P V +SAG H+V L D + +WG+
Sbjct: 1028 NSAGQLG-DGTLNSRSQPGAGPTLSSFVALSAGAQHTVVLRSDDSFLSWGTV 1078
>gi|365760753|gb|EHN02449.1| Srm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 482
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 176/397 (44%), Gaps = 63/397 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L ED V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEVKIISFAVGGMHTLALDEDSNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDASDLSDDEDGDLNELESTPAKIPRDCFPPLTKGHKI 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ+ A D+ S AL +G VYAWG+FR + G +G E IQ TP KL + S IV++A
Sbjct: 168 VQLGATDNMSCALFSNGEVYAWGTFRCNEGILGFYQEKIKIQTTPWKLPTFSKFNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHVLFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K + ++++GLN + Q G SE + G P + D +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SENVEDG-ALVTKPKKLPLPEDVIVRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D G+ P P+P+
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEAGIPKSDLPEYTYNDVHGKARAIPLPTKLKNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
++A G+ S A+ G+ Y WG G Y +G G +D
Sbjct: 397 KAVAAGSHHSIAVAQNGIAYSWGFGETYAVGLGPSED 433
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 105/283 (37%), Gaps = 70/283 (24%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ F GS+ GL ++ + EV++ F +K +S A G H+
Sbjct: 47 DIFCWGTGSMCELGLGPLAK----NKEVKRPRLNPFLPRDEVKIIS------FAVGGMHT 96
Query: 304 LALNSEGKIYAFGRHDYGRLG---------LKN-------------VSEPVTEPTPIPS- 340
LAL+ + ++++G +D G LG LK+ ++E + P IP
Sbjct: 97 LALDEDSNVWSWGCNDVGALGRDTSNAKEQLKDMDASDLSDDEDGDLNELESTPAKIPRD 156
Query: 341 -----LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG 395
+ I + + +S A+ S G +Y WG
Sbjct: 157 CFPPLTKGHKIVQLGATDNMSCALFSNGEVYAWGTF------------------------ 192
Query: 396 RHDYGRLGLKNVSEPV-TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
R + G LG + T P +P+ I +A G +D EG+++ WG G Q
Sbjct: 193 RCNEGILGFYQEKIKIQTTPWKLPTFSKFNIVQLAPGKDHVLFLDEEGMVFAWGNGQQNQ 252
Query: 455 LGNGKEDDILEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
LG ++E + ++ + V +ASG H L K
Sbjct: 253 LGR----KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|393215520|gb|EJD01011.1| RCC1/BLIP-II [Fomitiporia mediterranea MF3/22]
Length = 420
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 173/351 (49%), Gaps = 54/351 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGR------EAEGDSEF------------IPQT 115
+ GGMHT+ + E G +++ G NDE ALGR + E + EF +
Sbjct: 37 IAAGGMHTMFVDEKGTIWSCGVNDEAALGRITKDVPDPEKEGEFMDVDVLTAFPYPLESL 96
Query: 116 VNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTP---LKLESV 171
V +AV+I+AGD+ A+ + G + WGSFR + GS+G G +Q P L L
Sbjct: 97 VEEKFRAVKIAAGDNICAAISDQGELRVWGSFRANEGSLGFSSGLKLQHLPTPILNLPKD 156
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+ +A+G +H V+LT+ GN+ T G EQGQLGR RR + P +V L+
Sbjct: 157 EKVASVAAGDNHLVVLTTYGNIYTWGAGEQGQLGRKILE------RRKIHGTTPEKVTLR 210
Query: 232 RKHIDDVFTGVYN--TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ V G N +F + KG + +GLN+ Q+G + + + P LI+ L
Sbjct: 211 LRSRKAVTVGAGNFASFAVDEKGDVWGWGLNSVGQVG---TGYEDEDDGIVPQPRLIEEL 267
Query: 289 S------DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-------------VS 329
S D + T + G HH++ L S+G+++ GR GRLGL + V+
Sbjct: 268 SPAALGNDARVTRIVGGDHHTIFLTSDGRVFGCGRASGGRLGLPSTHPAFTVKGYNGFVA 327
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+P P P P+ +D + ++ G +FA+ + G +Y WG GN +LG G+
Sbjct: 328 KPTHIPFPDPASEDP-VVHVSAGPRANFAVTAAGAMYAWGEGNQGELGIGE 377
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 169/392 (43%), Gaps = 76/392 (19%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG----MSFLEPGE 227
+GI IA+G H + + +G + + G ++ LGRIT + + G + L
Sbjct: 32 AGIEAIAAGGMHTMFVDEKGTIWSCGVNDEAALGRIT-KDVPDPEKEGEFMDVDVLTAFP 90
Query: 228 VPLKRKHIDDVFTGV-------YNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTC 278
PL+ +++ F V IS +G + +G N LG + SG
Sbjct: 91 YPLE-SLVEEKFRAVKIAAGDNICAAISDQGELRVWGSFRANEGSLGFS------SGLKL 143
Query: 279 FFTPHLIKSL-SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV---TE 334
P I +L D+K +A+G +H + L + G IY +G + G+LG K + T
Sbjct: 144 QHLPTPILNLPKDEKVASVAAGDNHLVVLTTYGNIYTWGAGEQGQLGRKILERRKIHGTT 203
Query: 335 PTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
P + L+ + ++ GN SFA+D +G ++GWG+ + Q+G G ED+
Sbjct: 204 PEKVTLRLRSRKAVTVGAGNFASFAVDEKGDVWGWGLNSVGQVGTGYEDEDDGIVPQPRL 263
Query: 384 --------------------------ILNSEGKIYAFGRHDYGRLGLKN----------- 406
L S+G+++ GR GRLGL +
Sbjct: 264 IEELSPAALGNDARVTRIVGGDHHTIFLTSDGRVFGCGRASGGRLGLPSTHPAFTVKGYN 323
Query: 407 --VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
V++P P P P+ +D + ++ G +FA+ + G +Y WG GN +LG G+ +
Sbjct: 324 GFVAKPTHIPFPDPASEDPVV-HVSAGPRANFAVTAAGAMYAWGEGNQGELGIGEGRNAE 382
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P + K+ ++ + GGQH + L + K
Sbjct: 383 TPTVVVRKEGGSWKAIAAECGGQHGLGLFRKK 414
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR---EAEGDSEFIPQTVNL---PKKA 122
+ V V G H V LT G +YTWG ++G LGR E P+ V L +KA
Sbjct: 157 EKVASVAAGDNHLVVLTTYGNIYTWGAGEQGQLGRKILERRKIHGTTPEKVTLRLRSRKA 216
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL----KGEGIQKTPLKLESVSG----- 173
V + AG+ S A+ E G V+ WG +S G +G + +GI P +E +S
Sbjct: 217 VTVGAGNFASFAVDEKGDVWGWG--LNSVGQVGTGYEDEDDGIVPQPRLIEELSPAALGN 274
Query: 174 ---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+ +I G H + LTS G + G G+LG + A +P +P
Sbjct: 275 DARVTRIVGGDHHTIFLTSDGRVFGCGRASGGRLGLPSTHPAFTVKGYNGFVAKPTHIPF 334
Query: 231 KRKHIDDVFTGV-----YNTFISSKGSILAFGLNNYSQLG 265
+D V N +++ G++ A+G N +LG
Sbjct: 335 PDPASEDPVVHVSAGPRANFAVTAAGAMYAWGEGNQGELG 374
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 134/337 (39%), Gaps = 45/337 (13%)
Query: 37 GVVLTCGQGDTGQLGL----GPDVMERKTF--------------ALVEDLDNVVEVVVGG 78
G + +CG D LG PD + F +LVE+ V++ G
Sbjct: 51 GTIWSCGVNDEAALGRITKDVPDPEKEGEFMDVDVLTAFPYPLESLVEEKFRAVKIAAGD 110
Query: 79 MHTVCLTEDGKVYTWGC--NDEGALGREAEGDSEFIPQTV-NLPK--KAVQISAGDSHSV 133
+++ G++ WG +EG+LG + + +P + NLPK K ++AGD+H V
Sbjct: 111 NICAAISDQGELRVWGSFRANEGSLGFSSGLKLQHLPTPILNLPKDEKVASVAAGDNHLV 170
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLK--------GEGIQKTPLKLESVSGIVKIASGADHFV 185
L G +Y WG+ G +G K G +K L+L S V + +G
Sbjct: 171 VLTTYGNIYTWGA--GEQGQLGRKILERRKIHGTTPEKVTLRLRSRKA-VTVGAGNFASF 227
Query: 186 MLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ +G++ G GQ+G + R + L P + + V +
Sbjct: 228 AVDEKGDVWGWGLNSVGQVGTGYEDEDDGIVPQPRLIEELSPAALGNDARVTRIVGGDHH 287
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSE---VQKSGNTCFFTPHLI---KSLSDKKFTMLA 297
F++S G + G + +LG + K N P I S+ ++
Sbjct: 288 TIFLTSDGRVFGCGRASGGRLGLPSTHPAFTVKGYNGFVAKPTHIPFPDPASEDPVVHVS 347
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGL---KNVSEP 331
+G + A+ + G +YA+G + G LG+ +N P
Sbjct: 348 AGPRANFAVTAAGAMYAWGEGNQGELGIGEGRNAETP 384
>gi|384501769|gb|EIE92260.1| hypothetical protein RO3G_17067 [Rhizopus delemar RA 99-880]
Length = 429
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 37/368 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKT-FALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G + CG D GQLG+ D R V ++D V+V GG+H+ +T DG +Y+
Sbjct: 46 TTKGQLFVCGTNDFGQLGMEGDEKNRPVPIKSVMNID-FVDVTAGGLHSFAMTPDGSLYS 104
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WGC DEG LGRE D+ P +++ ++ V++ +GD ++AL +G +Y+WG++R + G
Sbjct: 105 WGCTDEGVLGREGRNDT---PVRLDVKERFVKVVSGDCINLALTSEGDLYSWGTYRGADG 161
Query: 153 SMGLKGE-GIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RIT 208
+ G Q+TP+ + + IV IA+G +H + L++ G L + G EQGQLG RI+
Sbjct: 162 AFGFSPTCSQQRTPVLFDPLIKETIVDIAAGTNHSLALSADGRLFSWGYGEQGQLGRRIS 221
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
R + R + L K++ + G Y++ ++S + A+GLNN+ Q +
Sbjct: 222 PRYPKDSLRCDLVGL---------KNVKLIGAGSYHSLAVTSDNVLFAWGLNNFRQCVNS 272
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ +V + T P S K ++ G+H SL +N G ++ FGR D +LGL
Sbjct: 273 E-QVVITQPTEVELPE-----SVGKIVSVSGGEHFSLIINEHGDVFTFGRGDAHQLGLSE 326
Query: 328 VSEPVTEPT----------PIPSLQDK--TITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
+ + T P + DK ++ ++ G+ A + G Y WG +
Sbjct: 327 ETMSHLKLTSAESAFKFIIPQATKVDKLPPVSHVSVGSEFVLAACTNGEGYSWGFNSSNA 386
Query: 376 LGNGKEDD 383
+GNG ++D
Sbjct: 387 IGNGNDED 394
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 72/391 (18%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +G++G+ + P+ ++SV I V + +G H +T G+L + GC ++G LGR
Sbjct: 60 GQLGMEGDE-KNRPVPIKSVMNIDFVDVTAGGLHSFAMTPDGSLYSWGCTDEGVLGR--- 115
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEA 267
RN P + +K + + V N ++S+G + ++G + G +
Sbjct: 116 --EGRND-------TPVRLDVKERFVKVVSGDCINLALTSEGDLYSWGTYRGADGAFGFS 166
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ Q+ TP L L + +A+G +HSLAL+++G+++++G + G+LG +
Sbjct: 167 PTCSQQR------TPVLFDPLIKETIVDIAAGTNHSLALSADGRLFSWGYGEQGQLGRR- 219
Query: 328 VSEPVTEPTPIPSLQD-----KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE- 381
++ P SL+ K + I G+ S A+ S+ VL+ WG+ N Q N ++
Sbjct: 220 ----ISPRYPKDSLRCDLVGLKNVKLIGAGSYHSLAVTSDNVLFAWGLNNFRQCVNSEQV 275
Query: 382 --------------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
I+N G ++ FGR D +LGL + + T
Sbjct: 276 VITQPTEVELPESVGKIVSVSGGEHFSLIINEHGDVFTFGRGDAHQLGLSEETMSHLKLT 335
Query: 416 ----------PIPSLQDK--TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
P + DK ++ ++ G+ A + G Y WG + +GNG ++D
Sbjct: 336 SAESAFKFIIPQATKVDKLPPVSHVSVGSEFVLAACTNGEGYSWGFNSSNAIGNGNDEDE 395
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P ++GK L +++VA+GGQHSV + K
Sbjct: 396 PVPCLLKGKNLGTNHIIRVAAGGQHSVFITK 426
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 233/515 (45%), Gaps = 64/515 (12%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
L+++ +P V V S +L G V G +GQLG G +R T
Sbjct: 88 LQRLAPAPLPSPRDIVSVVSGEAHSLALDEAG-TVWAWGGNSSGQLGDG-TTTDRVTPMQ 145
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPKKA 122
V L +VV V G H++ L DG V+ WG N G LGR G +E P+ V +
Sbjct: 146 VAGLTDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGR---GHTEPGLTPEPVPGLEGV 202
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGA 181
V ++AG ++A+++DGTV AWG+ +S G +G G Q+ P+++ +SGI + +G
Sbjct: 203 VALAAGFDFTLAVMDDGTVRAWGA--NSSGQLG-DGTFTQRLAPVEVAHISGISAVTAGT 259
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H V L G + T G GQLG + AR PG +K D
Sbjct: 260 YHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPAR------VPGLERVKAVASMD---- 309
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ + GS+LA+G N QLG+ SG TP + L + + G
Sbjct: 310 ASSLALLEAGSVLAWGANGSGQLGD-------SGTDDRATPGEVPGL--RSVAAVVGGAQ 360
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H+LAL +G ++A+G G+LG SE P P+ L D + S+A G+ S A
Sbjct: 361 HALALRGDGTLWAWGGGLAGQLG-HGGSERHVVPAPLLRLAD--VASMAAGSFHSLAALG 417
Query: 362 EGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRH 397
+G ++ WG QLG+G + + ++G ++A+GR+
Sbjct: 418 DGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRN 477
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
G+LG + P + L ++ ++A G + A+ +G ++ WG QLG+
Sbjct: 478 AAGQLG-DGSTRDRARPVAVSGL--TSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGD 534
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G D L P+++ +L+ +V+ VA+G S+ L
Sbjct: 535 GTTVDRLTPVRV--ARLD--SVVAVAAGTYFSMAL 565
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 222/476 (46%), Gaps = 63/476 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G +GQLG G + +R V + V + G H V L EDG V+TWG N
Sbjct: 969 GTAWAWGANPSGQLGDGTNHSQR-VPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDN 1027
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + P+ V + ++AG+ SVA+L G +AWGS + +G +G
Sbjct: 1028 TLGQLGDGTSAPTWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGS--NEYGQLGD 1085
Query: 157 KGEGIQKTPLKLESVSGIVK-----IASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQR 210
G + TP+++ + ++ + + A H V L + G + G GQLG T+R
Sbjct: 1086 GKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTER 1145
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
A+ RG++ + V TG +++ + S G++ A+G N + QLG+ +
Sbjct: 1146 RAAPVVVRGLT------------GVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTT 1193
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ TP + L +K + +G +H+LA+ S+G ++A+G + +G+LG +
Sbjct: 1194 LSRT-------TPVRVAGL--QKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLG-DGTA 1243
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-------- 381
E P + L + +TS+A G+ S A+ ++G L WG QLG+G
Sbjct: 1244 ESRLLPVRVEGLSN--VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVW 1301
Query: 382 ----DDI------------LNSEGKIYAFGRHDYGRLGLKNVSEPV-TEPTPIPSLQDKT 424
D + L +G ++ +G + + +LG + S P P+P L
Sbjct: 1302 VKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSG-- 1359
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+T+I G SFA+ +G ++ WG + QLG G + EP+++ K+L +V+
Sbjct: 1360 VTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRV--KELAEVSVV 1413
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 197/449 (43%), Gaps = 63/449 (14%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ + G H++ ++ G V+ WG N G LG EA P + P+ V + +G++H
Sbjct: 52 MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAH 111
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+AL E GTV+AWG +S G +G + TP+++ ++ +V +A+G H + L G
Sbjct: 112 SLALDEAGTVWAWGG--NSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGDFHSLALRGDG 169
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFI 247
+ G GQLGR EPG P ++ V + +
Sbjct: 170 TVWAWGTNFHGQLGR--------------GHTEPGLTPEPVPGLEGVVALAAGFDFTLAV 215
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
G++ A+G N+ QLG+ T P + +S + + +G +H++AL
Sbjct: 216 MDDGTVRAWGANSSGQLGDGT-------FTQRLAPVEVAHIS--GISAVTAGTYHAVALG 266
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++ +G + G+LG S+ P +P L+ + ++A + S A+ G +
Sbjct: 267 KDGGVWTWGANSSGQLGDGAWSDRAV-PARVPGLE--RVKAVASMDASSLALLEAGSVLA 323
Query: 368 WGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLG 403
WG QLG+ DD L +G ++A+G G+LG
Sbjct: 324 WGANGSGQLGDSGTDDRATPGEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLG 383
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
SE P P+ L D + S+A G+ S A +G ++ WG QLG+G +
Sbjct: 384 -HGGSERHVVPAPLLRLAD--VASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAER 440
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+++EG + VA+ G HS+ +
Sbjct: 441 HAAVRVEGLS----GIRGVAASGHHSLAV 465
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 192/452 (42%), Gaps = 59/452 (13%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
V L NV V G H + + DG V+ WG N EG LG D F P V
Sbjct: 596 VAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSD-RFRPVQVPGLTGITA 654
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
+S G SHS+AL DG+V AWG + +G +G + P + ++GI + H
Sbjct: 655 VSGGRSHSMALHGDGSVRAWG--YNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHLHV 712
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L + G L G GQLG +SR + RG+ ++ + + R H
Sbjct: 713 LALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVD--RLAVGRAH--------- 761
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ G++LA+G N QLG+ + ++G P L++ + + +ASG HS
Sbjct: 762 TLMVRPDGAVLAWGENASGQLGDG-TTTHRAG------PVLVRGVPCVR--SVASGVLHS 812
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL +G ++A+G + G+LG + V P + LQ + S A+ ++G
Sbjct: 813 LALACDGSVWAWGANGRGQLGDGTTASRVI-PARVDGLQGAVAVAAGG--DASLALLADG 869
Query: 364 VLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDY 399
+ WG QLG+G D +G ++A+G +
Sbjct: 870 TAWAWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGALWAWGANGS 929
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G+LG + + PTP+ + + S++ G S A+ +G + WG QLG+G
Sbjct: 930 GQLGEGSTTP---SPTPVRVKGLEGVASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGT 986
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
P KQ+ + ++ S G H V+
Sbjct: 987 NHSQRVP-----KQVTSVKRVRAMSAGAHHVV 1013
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 26/313 (8%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM 79
V V++ A +L ++ G V G GQLG G + R T V L VV + GG
Sbjct: 1159 VAVSTGAWHSLALRSDG-TVWAWGANGFGQLGDG-TTLSRTTPVRVAGLQKVVAIGAGGY 1216
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H + + DG V+ WG N G LG + +S +P V ++ GD HS+ALL DG
Sbjct: 1217 HALAVRSDGSVWAWGYNAFGQLG-DGTAESRLLPVRVEGLSNVTSVAGGDHHSLALLADG 1275
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
++ AWG+ ++ G +G G G + + + ++ V G+V++ +GA H + L G + T G
Sbjct: 1276 SLGAWGN--NAAGQLG-DGTGTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGD 1332
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
QLG + +R + P VP + + G ++F + KG++ A+G
Sbjct: 1333 NTHSQLGAGDDSTRTR--------IVPRPVP-GLSGVTAIGAGARHSFAVGPKGTVWAWG 1383
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N++ QLG D N P +K L++ ++++ G SLA+ +G + ++G
Sbjct: 1384 RNSHGQLGLGD-------NANRAEPLRVKELAE--VSVVSGGADFSLAMQRDGTVSSWGS 1434
Query: 318 HDYGRLGLKNVSE 330
+G LGL +
Sbjct: 1435 SLHGALGLGTAGQ 1447
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 64/406 (15%)
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESVS 172
Q + + ++I+AG HS+ + G V+AWG ++ G +G + +Q+ P L S
Sbjct: 43 QRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGG--NTSGQLGGEATPLQRLAPAPLPSPR 100
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
IV + SG H + L G + G GQLG T P++
Sbjct: 101 DIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDR--------------VTPMQV 146
Query: 233 KHIDDVFTGVYNTF----ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ DV F + G++ A+G N + QLG +E TP + L
Sbjct: 147 AGLTDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTE-------PGLTPEPVPGL 199
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+ LA+G +LA+ +G + A+G + G+LG ++ + P+ I++
Sbjct: 200 --EGVVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRL---APVEVAHISGISA 254
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------I 384
+ G + A+ +G ++ WG + QLG+G D
Sbjct: 255 VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSLA 314
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L G + A+G + G+LG + T P +P L +++ ++ G + A+ +G L
Sbjct: 315 LLEAGSVLAWGANGSGQLGDSGTDDRAT-PGEVPGL--RSVAAVVGGAQHALALRGDGTL 371
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ WG G QLG+G + + P + L V +A+G HS+
Sbjct: 372 WAWGGGLAGQLGHGGSERHVVPAPL----LRLADVASMAAGSFHSL 413
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 42 CGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGAL 101
G GQLG G R + V+ +D VVEV G HT+ L DG V+TWG N L
Sbjct: 1280 WGNNAAGQLGDGTGTT-RYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQL 1338
Query: 102 GREAEGD----SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G GD + +P+ V I AG HS A+ GTV+AWG R+SHG +GL
Sbjct: 1339 G---AGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPKGTVWAWG--RNSHGQLGLG 1393
Query: 158 GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT--QRSA 212
+ PL+++ ++ + ++ GAD + + G + + G G LG T QRS+
Sbjct: 1394 DNANRAEPLRVKELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSS 1450
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGG 78
V V + A TL + G G V T G QLG G D + V L V + G
Sbjct: 1309 VEVRAGAAHTLALR-GDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGA 1367
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
H+ + G V+ WG N G LG + + P V + +S G S+A+ D
Sbjct: 1368 RHSFAVGPKGTVWAWGRNSHGQLGL-GDNANRAEPLRVKELAEVSVVSGGADFSLAMQRD 1426
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTP 165
GTV +WGS HG++GL G + +P
Sbjct: 1427 GTVSSWGS--SLHGALGLGTAGQRSSP 1451
>gi|323355109|gb|EGA86939.1| Srm1p [Saccharomyces cerevisiae VL3]
Length = 431
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 178/393 (45%), Gaps = 63/393 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
S+A G+ S A+ G+ Y WG G Y +G G
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 151/394 (38%), Gaps = 88/394 (22%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 48 IFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 218
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRP---FGLRH 275
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
S+A G+ S A+ G+ Y WG G Y +G G
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------------ 384
+A G +D EG+++ WG G QLG +
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENH 285
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEP---VTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + K+ ++G + +G+ G+ E VT+P + + I SIA G S +
Sbjct: 286 CFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLIL 345
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMK-IEGK--------QLNNYTVLQ-VASGGQH 488
+G LY G + +++G K++ K + GK +LNN + VA+G H
Sbjct: 346 SQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHH 405
Query: 489 SVILAK 494
SV +A+
Sbjct: 406 SVAVAQ 411
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 95/271 (35%), Gaps = 56/271 (20%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG K +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR-KVMER 260
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
++ + V +ASG H L K
Sbjct: 261 FRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 212/486 (43%), Gaps = 53/486 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYT 92
TG G V G GQLG G R T A V L + + GG+HT L G V+
Sbjct: 222 TGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWC 281
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG ND G LG ++ DS LP I+AGD H+ AL G V+ WG + G
Sbjct: 282 WGRNDSGQLGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGG--NGFG 339
Query: 153 SMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + TP + + SG+ IA+G H L S G + G GQLG T +
Sbjct: 340 QLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGT--T 397
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
+R+ +S L G + G++ + S G + +GLNN QLG+ S+
Sbjct: 398 TARSTPAAVSGLPSGVTAIAAG-------GLHTCALMSSGGVWCWGLNNSGQLGDG-SDT 449
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
S TP + L+ T +A+G H+ AL S G ++ +GR++ G+LG +
Sbjct: 450 DSS------TPVAVSGLASGVET-IAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYH 502
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
+T P + L +T+IA G+ + A+ G ++ WG QLG+G D
Sbjct: 503 IT-PVAVSGLPSG-VTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVS 560
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
L S G ++ +G + G+LG + T P + L +T
Sbjct: 561 GLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLG-DGTTTNRTTPVAVSGLPSG-VT 618
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
+IA G + A+ S G ++ WG QLG+G + P + G V +A+G
Sbjct: 619 AIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGW 675
Query: 487 QHSVIL 492
+H+ L
Sbjct: 676 EHTCAL 681
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 207/456 (45%), Gaps = 61/456 (13%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQIS 126
L V + GG HT LT G V WG ND G LG + + P V+ LP I+
Sbjct: 52 LQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLG-DGTPTTRSTPGAVSGLPSGVTAIA 110
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESV-SGIVKIASGAD 182
AG+ H+ AL G V WG+ G G G+ + TP + + SG+ IA+G D
Sbjct: 111 AGNYHTCALTGSGGVRCWGANYS-----GQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGD 165
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H L S G ++ G GQLG T + +R +S L G + G+
Sbjct: 166 HTCALMSSGGVMCWGDNYYGQLGDGT--TTNRRTPVAVSGLPSGVTAIAAG-------GL 216
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ ++ G + +G N Y QLG+ + +S TP + L T +A+G H
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRS------TPAAVGGL-PSGMTAIAAGGLH 269
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+ AL S G ++ +GR+D G+LG + ++ T P + L +T+IA G+ + A+
Sbjct: 270 TCALMSSGGVWCWGRNDSGQLGDGSDTDSST-PVAVSGLPSG-VTAIAAGDYHTCALTGS 327
Query: 363 GVLYGWGMGNGY-QLGNGKEDD-------------------------ILNSEGKIYAFGR 396
G ++ WG GNG+ QLG+G L S G ++ +GR
Sbjct: 328 GEVWCWG-GNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWGR 386
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
++ G+LG + + P + L +T+IA G + A+ S G ++ WG+ N QLG
Sbjct: 387 NNSGQLG-DGTTTARSTPAAVSGLPSG-VTAIAAGGLHTCALMSSGGVWCWGLNNSGQLG 444
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+G + D P+ + G V +A+GG H+ L
Sbjct: 445 DGSDTDSSTPVAVSGLASG---VETIAAGGWHTCAL 477
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 206/484 (42%), Gaps = 55/484 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V+ G GQLG G R A+ V + GG+HT LT G+V+ WG N
Sbjct: 174 GGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGLHTCALTGSGEVWCWGYN 233
Query: 97 DEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
G LG S P V LP I+AG H+ AL+ G V+ WG R+ G +G
Sbjct: 234 YYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWG--RNDSGQLG 291
Query: 156 LKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
+ TP+ + + SG+ IA+G H LT G + G GQLG T + S
Sbjct: 292 DGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARS- 350
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
P V ++ + G Y+T + S G + +G NN QLG+ + +
Sbjct: 351 ---------TPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARS 401
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
TP + L T +A+G H+ AL S G ++ +G ++ G+LG + ++ T
Sbjct: 402 -------TPAAVSGL-PSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSST 453
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK------------- 380
P + L + +IA G + A+ S G ++ WG N QLG+G
Sbjct: 454 -PVAVSGLASG-VETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGL 511
Query: 381 ------------EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
L G ++ +G + G+LG ++ T P + L +T I
Sbjct: 512 PSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRST-PVAVSGLTSG-VTVI 569
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
A G + A+ S G ++ WG QLG+G + P+ + G V +A+GG H
Sbjct: 570 AAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG---VTAIAAGGWH 626
Query: 489 SVIL 492
+ L
Sbjct: 627 TCAL 630
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 216/505 (42%), Gaps = 57/505 (11%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
PS + + + T + GGV G+ D+GQLG G D A+ V +
Sbjct: 257 PSGMTAIAAGGLHTCALMSSGGV-WCWGRNDSGQLGDGSDTDSSTPVAVSGLPSGVTAIA 315
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVA 134
G HT LT G+V+ WG N G LG + + P V+ LP I+AGD H+ A
Sbjct: 316 AGDYHTCALTGSGEVWCWGGNGFGQLG-DGTTTARSTPAAVSGLPSGVETIAAGDYHTCA 374
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNL 193
L+ G V+ WG R++ G +G + TP + + SG+ IA+G H L S G +
Sbjct: 375 LMSSGGVWCWG--RNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCALMSSGGV 432
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGS 252
G GQLG + +S P V ++ + G ++T ++S G
Sbjct: 433 WCWGLNNSGQLGDGSDTDSS----------TPVAVSGLASGVETIAAGGWHTCALTSSGG 482
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G NN QLG+ + TP + L T +A+G +H+ AL G +
Sbjct: 483 VWCWGRNNSGQLGDGSTIYH-------ITPVAVSGL-PSGVTAIAAGDYHTCALTGSGGV 534
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+ +G + G+LG ++ T P + L +T IA G + A+ S G ++ WG
Sbjct: 535 WCWGYNLSGQLGDGTTTDRST-PVAVSGLTSG-VTVIAAGRFHTCALTSSGGVWCWGANF 592
Query: 373 GYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGRLGLKNV 407
QLG+G + L S G+++ +G + YG+LG
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTT 652
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
+ T P + L +T+IA G + A+ S G ++ WG QLG+G + P
Sbjct: 653 TNRST-PGAVSGLPSG-VTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 710
Query: 468 KIEGKQLNNYTVLQVASGGQHSVIL 492
+ G V +A+G H+ L
Sbjct: 711 AVSGLPSG---VTAIAAGVYHTCAL 732
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 214/511 (41%), Gaps = 53/511 (10%)
Query: 9 LRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL 68
L + +P Q V + TG G V+ G D GQLG G R T V L
Sbjct: 44 LHTSSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPT-TRSTPGAVSGL 102
Query: 69 -DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
V + G HT LT G V WG N G LG LP I+A
Sbjct: 103 PSGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAA 162
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVM 186
G H+ AL+ G V WG + +G +G ++TP+ + + SG+ IA+G H
Sbjct: 163 GGDHTCALMSSGGVMCWG--DNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGLHTCA 220
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
LT G + G GQLG T + SR+ + L G + G++
Sbjct: 221 LTGSGEVWCWGYNYYGQLGDGTT-TYSRSTPAAVGGLPSGMTAIAAG-------GLHTCA 272
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ S G + +G N+ QLG+ S+ S TP + L T +A+G +H+ AL
Sbjct: 273 LMSSGGVWCWGRNDSGQLGDG-SDTDSS------TPVAVSGL-PSGVTAIAAGDYHTCAL 324
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
G+++ +G + +G+LG + + P + L + +IA G+ + A+ S G ++
Sbjct: 325 TGSGEVWCWGGNGFGQLG-DGTTTARSTPAAVSGLPSG-VETIAAGDYHTCALMSSGGVW 382
Query: 367 GWGMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGR 401
WG N QLG+G L S G ++ +G ++ G+
Sbjct: 383 CWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQ 442
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LG + ++ T P + L + +IA G + A+ S G ++ WG N QLG+G
Sbjct: 443 LGDGSDTDSST-PVAVSGLASG-VETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTI 500
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ P+ + G V +A+G H+ L
Sbjct: 501 YHITPVAVSGLPSG---VTAIAAGDYHTCAL 528
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 163/367 (44%), Gaps = 25/367 (6%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
PS + + + T + GGV G ++GQLG G D A+ V +
Sbjct: 410 PSGVTAIAAGGLHTCALMSSGGV-WCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIA 468
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVA 134
GG HT LT G V+ WG N+ G LG + P V+ LP I+AGD H+ A
Sbjct: 469 AGGWHTCALTSSGGVWCWGRNNSGQLG-DGSTIYHITPVAVSGLPSGVTAIAAGDYHTCA 527
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNL 193
L G V+ WG + G +G + TP+ + + SG+ IA+G H LTS G +
Sbjct: 528 LTGSGGVWCWG--YNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGV 585
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
G GQLG T + +R +S L G + G + ++S G +
Sbjct: 586 WCWGANFDGQLGDGT--TTNRTTPVAVSGLPSGVTAIAAG-------GWHTCALTSSGEV 636
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G N Y QLG+ + + TP + L T +A+G H+ AL S G+++
Sbjct: 637 WCWGDNYYGQLGDGTTTNRS-------TPGAVSGL-PSGVTAIAAGWEHTCALTSSGEVW 688
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G + YG+LG + T P + L +T+IA G + A+ G + WG
Sbjct: 689 CWGDNYYGQLGDGTTTNRST-PGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGD 746
Query: 374 YQLGNGK 380
QLG+G+
Sbjct: 747 GQLGDGR 753
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 128/304 (42%), Gaps = 25/304 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ ++GQLG G + A+ V + G HT LT G V+ WG N
Sbjct: 481 GGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYN 540
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D L I+AG H+ AL G V+ WG+ D G +G
Sbjct: 541 LSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFD--GQLGD 598
Query: 157 KGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ TP+ + + SG+ IA+G H LTS G + G GQLG T + S
Sbjct: 599 GTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRS-- 656
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
PG V + + G +T ++S G + +G N Y QLG+ + +
Sbjct: 657 --------TPGAVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRS- 707
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + L T +A+G +H+ AL G + +G + G+LG P+
Sbjct: 708 ------TPGAVSGL-PSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG---RPLYR 757
Query: 335 PTPI 338
TP+
Sbjct: 758 TTPV 761
>gi|353235198|emb|CCA67214.1| related to Pim1 protein (Poly(A)+ RNA transport protein 2),
putative-Cryptococcus neoformans [Piriformospora indica
DSM 11827]
Length = 537
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 212/462 (45%), Gaps = 85/462 (18%)
Query: 39 VLTCGQGDTGQLGLGPD----------------VMERKTFALVEDLDNVVEVVVGGMHTV 82
+ G GD GQLGLGPD +E F E + V GGMH++
Sbjct: 88 LFVFGNGDFGQLGLGPDETTELTKPKLHAWCAEAIEEGRFG--EPGAGIEAVAAGGMHSL 145
Query: 83 CLTEDGKVYTWGCNDEGALGREAEG---------DSEFIPQT-------VNLPKKAVQIS 126
L E GKV++WG ND+ ALGR+ EG D E + T V +AV +
Sbjct: 146 MLDEQGKVWSWGVNDDSALGRQTEGVKDADGNPVDQEELSATPHVIDALVEQKFRAVVVV 205
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGL-----------KGEGIQKT--PLKLESVSG 173
AGD AL + G + WG+FR G + G +T P+ L
Sbjct: 206 AGDCTGAALSDKGELRIWGTFRSPEGQKAFSSTEKAKDGAARAAGASETLHPVALPGFKS 265
Query: 174 --IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
I I++GA+H + LT+ G + G EQGQ+GR + SR+ + GM EP + ++
Sbjct: 266 IQIAAISAGANHVIALTTDGLVYGWGSSEQGQIGR---KVVSRHRKNGM---EPERLDIR 319
Query: 232 RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG-EADSEVQKSGN-TCFFTPHLIKSL 288
+ V TG Y++F + G++ A+GLN++ QLG ++ + V S + T P L +
Sbjct: 320 EAVV--VGTGDYHSFAVDKSGTVWAWGLNSWGQLGFKSAANVTDSVHYTVEDVPSLHPDV 377
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-----KNVSEP------VTEPTP 337
+ + +A G+HH+L +G+++A GR+D G+LG+ +++P EP
Sbjct: 378 TGSRVVQIAGGEHHTLFRLEDGRVFAVGRNDGGQLGVGPDHPSILADPDAKGMATFEPVQ 437
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN-----------GYQLGNGKEDDILN 386
+P +Q +T I G + A+ G+L+ WG GN L G+E +
Sbjct: 438 VP-IQG-FVTDIQAGPRYNLALTDTGILFSWGQGNLGISRDVSETSSPTLIAGRESSVWK 495
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G + G+H + + K E +T +P P + D + +
Sbjct: 496 CLG-MTCGGQHSFIIVSKKEPDEELTVASPAPVIADAAVNGV 536
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 55/280 (19%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS-GNTC-----FFTPHLIKSLSDKKF- 293
G+++ + +G + ++G+N+ S LG V+ + GN TPH+I +L ++KF
Sbjct: 141 GMHSLMLDEQGKVWSWGVNDDSALGRQTEGVKDADGNPVDQEELSATPHVIDALVEQKFR 200
Query: 294 -TMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEP------------VTEPTPI 338
++ +G AL+ +G++ +G R G+ + + P +
Sbjct: 201 AVVVVAGDCTGAALSDKGELRIWGTFRSPEGQKAFSSTEKAKDGAARAAGASETLHPVAL 260
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHD 398
P + I +I+ G A+ ++G++YGWG Q+G K+ + RH
Sbjct: 261 PGFKSIQIAAISAGANHVIALTTDGLVYGWGSSEQGQIGR-----------KVVS--RH- 306
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
KN EP L + + G+ SFA+D G ++ WG+ + QLG
Sbjct: 307 -----RKNGMEP-------ERLDIREAVVVGTGDYHSFAVDKSGTVWAWGLNSWGQLGFK 354
Query: 459 KEDDI-------LEPMKIEGKQLNNYTVLQVASGGQHSVI 491
++ +E + + V+Q+A G H++
Sbjct: 355 SAANVTDSVHYTVEDVPSLHPDVTGSRVVQIAGGEHHTLF 394
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV--GGMHTVCLTEDGKVY 91
T G+V G + GQ+G RK E LD VVV G H+ + + G V+
Sbjct: 282 TTDGLVYGWGSSEQGQIGRKVVSRHRKNGMEPERLDIREAVVVGTGDYHSFAVDKSGTVW 341
Query: 92 TWGCNDEGALG-REAEGDSEFIPQTV-NLP--------KKAVQISAGDSHSVALLEDGTV 141
WG N G LG + A ++ + TV ++P + VQI+ G+ H++ LEDG V
Sbjct: 342 AWGLNSWGQLGFKSAANVTDSVHYTVEDVPSLHPDVTGSRVVQIAGGEHHTLFRLEDGRV 401
Query: 142 YAWGSFRDSHGSMGL-----------KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTS 189
+A G R+ G +G+ +G+ P+++ + I +G + + LT
Sbjct: 402 FAVG--RNDGGQLGVGPDHPSILADPDAKGMATFEPVQVPIQGFVTDIQAGPRYNLALTD 459
Query: 190 RGNLLTAGCPEQGQLG 205
G L + G QG LG
Sbjct: 460 TGILFSWG---QGNLG 472
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 47/269 (17%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL----IKSLSDKKF-------TMLASGQH 301
+ FG ++ QLG E T P L +++ + +F +A+G
Sbjct: 88 LFVFGNGDFGQLGLGPDE-----TTELTKPKLHAWCAEAIEEGRFGEPGAGIEAVAAGGM 142
Query: 302 HSLALNSEGKIYAFGRHDYGRLG-----LKNVS-EPVTE------PTPIPSLQDKTITSI 349
HSL L+ +GK++++G +D LG +K+ PV + P I +L ++ ++
Sbjct: 143 HSLMLDEQGKVWSWGVNDDSALGRQTEGVKDADGNPVDQEELSATPHVIDALVEQKFRAV 202
Query: 350 A--CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
G+C A+ +G L WG + EG+ AF + + G
Sbjct: 203 VVVAGDCTGAALSDKGELRIWGT-------------FRSPEGQ-KAFSSTEKAKDGAARA 248
Query: 408 S--EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ P +P + I +I+ G A+ ++G++YGWG Q+G K
Sbjct: 249 AGASETLHPVALPGFKSIQIAAISAGANHVIALTTDGLVYGWGSSEQGQIGR-KVVSRHR 307
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+E ++L+ + V +G HS + K
Sbjct: 308 KNGMEPERLDIREAVVVGTGDYHSFAVDK 336
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 31/385 (8%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
+ V+ ++P Q V + S G V+ + G+G+ GQLG G D +R +
Sbjct: 1 MDSVMAAVPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHG-DAEDRLVPTV 59
Query: 65 VEDLD--NVVEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK- 120
+ D + V+ G HT +ED +VY+WG D G LG D F PQ V +
Sbjct: 60 LSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV-FTPQPVKALQG 118
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KI 177
K QI+ GDSH +A+ G V +WG R+ +G +GL P K+++ G+ I
Sbjct: 119 LKIKQIACGDSHCLAVTMAGQVQSWG--RNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMI 176
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHID 236
A+GA+H +T G+L G G LG RN R L P +V ++ + +
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGL-----GDRNDR-----LLPEKVSSVEGEKMV 226
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
V G +T +S G++ +G + Y QLG D E PH +++L D +
Sbjct: 227 LVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH-------LVPHKLEALKDSTISQ 279
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++ G H++AL SEGK+Y +G + +G++G+ N + + P + +D+ I+ +ACG
Sbjct: 280 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCS-PVQVHFPEDQKISQVACGWRH 338
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGK 380
+ A+ + ++ WG G QLGNG+
Sbjct: 339 TLALSEKKNVFSWGRGTSGQLGNGE 363
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 162/352 (46%), Gaps = 50/352 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLKR 232
+V +++GA H V L + L + G E GQLG + R +S F PG
Sbjct: 16 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGH--GDAEDRLVPTVLSGFDAPG------ 67
Query: 233 KHIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
I V G +T S+ + ++G ++ +LG +S + FTP +K+L
Sbjct: 68 --ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS-------SDVFTPQPVKALQG 118
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K +A G H LA+ G++ ++GR+ G+LGL + + P I + + + IA
Sbjct: 119 LKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFEGVCVKMIA 177
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE---------------------- 388
G + A+ +G LYGWG G LG G +D L E
Sbjct: 178 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTIT 237
Query: 389 ----GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
G +Y +G YG+LG + + + P + +L+D TI+ I+ G + A+ SEG L
Sbjct: 238 VSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSTISQISGGWRHTMALTSEGKL 296
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YGWG Q+G G DD P+++ + + + QVA G +H++ L++ K
Sbjct: 297 YGWGWNKFGQVGVGNNDDHCSPVQVHFPE--DQKISQVACGWRHTLALSEKK 346
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 165/380 (43%), Gaps = 46/380 (12%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
P+ V +SAG SHSVALL + +WG D G + + T L GI +
Sbjct: 13 PQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVI 72
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDD 237
GADH + + L G GR+ ++S P V L+ I
Sbjct: 73 CGADHTTAYSE--DELQVYSWGWGDFGRLGHGNSS-------DVFTPQPVKALQGLKIKQ 123
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G + ++ G + ++G N QLG +E P I++ M+
Sbjct: 124 IACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDS-------LLPQKIQAFEGVCVKMI 176
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A+G H+ A+ +G +Y +G YG LGL + ++ + P + S++ + + +ACG +
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHT 235
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGK 390
+ G LY +G QLG+G +D L SEGK
Sbjct: 236 ITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGK 295
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+Y +G + +G++G+ N + + P + +D+ I+ +ACG + A+ + ++ WG G
Sbjct: 296 LYGWGWNKFGQVGVGNNDDHCS-PVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRG 354
Query: 451 NGYQLGNGKEDDILEPMKIE 470
QLGNG+ D P+ I+
Sbjct: 355 TSGQLGNGEIVDRNTPVLID 374
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 32/308 (10%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G DV + ++ L + ++ G H + +T G+V +WG N
Sbjct: 88 VYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLAVTMAGQVQSWGRN 146
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG DS +PQ + + I+AG H+ A+ EDG +Y WG R +G++
Sbjct: 147 QNGQLGLGTTEDS-LLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR--YGNL 203
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL + P K+ SV G +V +A G H + ++ GNL T G + GQLG
Sbjct: 204 GLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFE-- 261
Query: 213 SRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
L P ++ LK I + G +T ++S+G + +G N + Q+G +++
Sbjct: 262 --------DHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNND 313
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ C +P + D+K + +A G H+LAL+ + ++++GR G+LG E
Sbjct: 314 -----DHC--SPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG---NGE 363
Query: 331 PVTEPTPI 338
V TP+
Sbjct: 364 IVDRNTPV 371
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ ++++G HS+AL + + ++GR + G+LG + + + PT + ITS+
Sbjct: 14 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPGITSVI 72
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A ED++ ++Y++G D+GRLG N S+
Sbjct: 73 CGADHTTAY--------------------SEDEL-----QVYSWGWGDFGRLGHGNSSDV 107
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P P+ +LQ I IACG+ A+ G + WG QLG G +D L P KI+
Sbjct: 108 FT-PQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQ 166
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
V +A+G +H+ + +
Sbjct: 167 A--FEGVCVKMIAAGAEHTAAVTE 188
>gi|242809260|ref|XP_002485332.1| pheromone response protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218715957|gb|EED15379.1| pheromone response protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 483
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 193/429 (44%), Gaps = 71/429 (16%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA------ 63
R++ +N ++ V + P + V G G+LGLG D ++
Sbjct: 26 RQKGDNFAESPKVVLTSAPNRRLD-----VFVFGTNCGGELGLG-DATKKPEIPGPVLNP 79
Query: 64 -LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP--------- 113
L + VV++ VGG+H+ LT D ++ TWG NDE LGR+ +S+ P
Sbjct: 80 KLSAETVGVVQLAVGGIHSAALTHDNQILTWGVNDEWTLGRDTTVESKKTPVDATSDNGE 139
Query: 114 --------------QTVNLPKKA---------VQISAGDSHSVALLEDGTVYAWGSFRDS 150
+ LP + Q+ A DS + AL G VY+WG+FRD+
Sbjct: 140 EDDEDDDEVELNLKEATPLPVDSSHFPDGTVFTQLVATDSATFALTSKGLVYSWGTFRDN 199
Query: 151 HGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G+ + IQ+ P + V ++K+ GA H + L S G + + G EQ QLGR
Sbjct: 200 NGTTRFSPKSTIQRAPALIPDVKDVLKLVPGAQHVLALISNGTVFSWGNNEQNQLGR--- 256
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
R SR +L PG+ L R I D+ G+Y++F I G + A+G NN+ Q G
Sbjct: 257 RMISR--LHEFPWLVPGQCSLPRG-IIDIGAGIYHSFAIHKTGQLYAWGSNNFGQTGIFQ 313
Query: 269 SEVQKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
S Q + TP + SL + G+ HSLA+N +G+ A+GR D LG+
Sbjct: 314 SAGQSDAVIPYPTP--VPSLGKGSGIVSVTGGKDHSLAVNEQGQCLAWGRIDNKALGIIA 371
Query: 328 VSEPVTE--------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
P ++ PTPI + K + + A G SFAI + Y WG
Sbjct: 372 KDIPTSDVIFDTYQKPRILKVPTPISGVVGKVVFA-AAGTDHSFAITQDRRAYSWGFNAQ 430
Query: 374 YQLGNGKED 382
+Q+G+G E+
Sbjct: 431 HQVGHGNEE 439
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 170/404 (42%), Gaps = 89/404 (22%)
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN---------- 215
L E+V G+V++A G H LT +LT G ++ LGR T + +
Sbjct: 81 LSAETV-GVVQLAVGGIHSAALTHDNQILTWGVNDEWTLGRDTTVESKKTPVDATSDNGE 139
Query: 216 ------ARRGMSFLEPGEVPLKRKHIDD--VFTGVYNT-----FISSKGSILAFGL---N 259
++ E +P+ H D VFT + T ++SKG + ++G N
Sbjct: 140 EDDEDDDEVELNLKEATPLPVDSSHFPDGTVFTQLVATDSATFALTSKGLVYSWGTFRDN 199
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
N + S +Q++ P LI + D L G H LAL S G ++++G ++
Sbjct: 200 NGTTRFSPKSTIQRA-------PALIPDVKD--VLKLVPGAQHVLALISNGTVFSWGNNE 250
Query: 320 YGRLGLKNVSEPVTEPTPIP---SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+LG + +S P +P SL + I I G SFAI G LY WG N Q
Sbjct: 251 QNQLGRRMISRLHEFPWLVPGQCSLP-RGIIDIGAGIYHSFAIHKTGQLYAWGSNNFGQT 309
Query: 377 G----NGKEDDIL----------------------------NSEGKIYAFGRHDYGRLGL 404
G G+ D ++ N +G+ A+GR D LG+
Sbjct: 310 GIFQSAGQSDAVIPYPTPVPSLGKGSGIVSVTGGKDHSLAVNEQGQCLAWGRIDNKALGI 369
Query: 405 KNVSEPVTE--------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
P ++ PTPI + K + + A G SFAI + Y WG
Sbjct: 370 IAKDIPTSDVIFDTYQKPRILKVPTPISGVVGKVVFA-AAGTDHSFAITQDRRAYSWGFN 428
Query: 451 NGYQLGNGKE--DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+Q+G+G E D++ +P +++ K ++ ++ A+GGQ S+++
Sbjct: 429 AQHQVGHGNEEKDEVEQPTQLKNKHVSGKMLVSAAAGGQFSIVV 472
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI--PSLQDKTI--TSIACGNCVSFAID 360
A N ++ FG + G LGL + ++ P P+ P L +T+ +A G S A+
Sbjct: 43 APNRRLDVFVFGTNCGGELGLGDATKKPEIPGPVLNPKLSAETVGVVQLAVGGIHSAALT 102
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP---VTEPTPI 417
+ + WG+ + + LG D + S+ K D G ++ E + E TP+
Sbjct: 103 HDNQILTWGVNDEWTLG---RDTTVESK-KTPVDATSDNGEEDDEDDDEVELNLKEATPL 158
Query: 418 P----SLQDKTI-TSIACGNCVSFAIDSEGVLYGWGM---GNGYQLGNGKEDDILEPMKI 469
P D T+ T + + +FA+ S+G++Y WG NG + K P I
Sbjct: 159 PVDSSHFPDGTVFTQLVATDSATFALTSKGLVYSWGTFRDNNGTTRFSPKSTIQRAPALI 218
Query: 470 EGKQLNNYTVLQVASGGQHSVIL 492
+ VL++ G QH + L
Sbjct: 219 PDVK----DVLKLVPGAQHVLAL 237
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 211/449 (46%), Gaps = 69/449 (15%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G +HT+ + +DG V+ WG N G LG DS IP V K V +SAG HS+AL
Sbjct: 50 GSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDS-CIPVRVKGLKDVVAVSAGTFHSLALK 108
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
+DG+V+ WG H + G + + + TP+K++ + IV IA+G D + + S G++
Sbjct: 109 KDGSVWIWG-----HTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGSDGSV 163
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISS 249
G G+L G+ L+P VP+K K + DV G+Y++ +
Sbjct: 164 WAWGINNHGEL--------------GIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKR 209
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ ++G N +LG +E + P +K LSD +++G HS+ALN +
Sbjct: 210 DGTVWSWGYNEDGELGNRPTE-----DYTVSVPVRVKGLSD--VIAISAGGFHSIALNKD 262
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW- 368
G ++ +G G + KN + P+ + +IA G S A+ +G ++ W
Sbjct: 263 GAVWIWG----GGIIEKN-GKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG 317
Query: 369 ----------------------GMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLK 405
G+ N + G+ + L G I+A+G + +G+LG +
Sbjct: 318 HNSYGVLGSNVGEHSFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRE 377
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
N S + P + L + + +IA G + AI +G ++ WG N QLGNG
Sbjct: 378 NNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYI 435
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P ++G LNN +++ +G QHS+ + K
Sbjct: 436 PTCVKG--LNNAVLVE--AGSQHSLAVDK 460
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 229/534 (42%), Gaps = 109/534 (20%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL---VEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V + G + G+LG P E T ++ V+ L +V+ + GG H++ L +DG V+ W
Sbjct: 211 GTVWSWGYNEDGELGNRP--TEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIW 268
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G G + + + D+ +IP + K V I+AG HS+AL +DGTV+ WG H S
Sbjct: 269 GG---GIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG-----HNS 320
Query: 154 MGLKGEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G+ G + + L V G +V +A+G H V LT G + G GQLGR
Sbjct: 321 YGVLGSNVGEHSFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGR-ENN 379
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLG- 265
S S N +P K K +D+V G + I G++ ++G NN QLG
Sbjct: 380 SFSLN------------LPYKVKWLDNVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGN 427
Query: 266 ---------------------EADSE----VQKSGNTCFF----------------TPHL 284
EA S+ V K G + +P
Sbjct: 428 GTYKSSYIPTCVKGLNNAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLP 487
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD- 343
IK T +A G + L L +G I+ G Y R K V+ T + L +
Sbjct: 488 IKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFR---KFTDSSVSSVTKLIRLDNI 544
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWG---MGNGYQLGNGKEDDI---------------- 384
K + SIA G S A+ ++G ++ WG + N + N E +
Sbjct: 545 KNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEKPVKIKGLSGVVKVAAGKY 604
Query: 385 ----LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L +G ++++G + YG+LG E P + L + + +IA G+ S A+
Sbjct: 605 HSLALKKDGTVWSWGYNAYGQLG-NGTRETSFVPVRVKGLNN--VVAIAAGDYHSMALKK 661
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G ++ WG QLG + P+K+E +L+N V+ +A+G HSV L K
Sbjct: 662 DGTVWVWGSNIRGQLGRRNIEFSTVPLKVE--KLDN--VVAIAAGDTHSVALKK 711
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 143/547 (26%), Positives = 228/547 (41%), Gaps = 135/547 (24%)
Query: 37 GVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G + G+LG+G P + K V+ L +VV V G H++ L DG V++W
Sbjct: 161 GSVWAWGINNHGELGIGSLKPSAVPVK----VKGLKDVVAVSAGLYHSLALKRDGTVWSW 216
Query: 94 GCNDEGALG-------------------------------------------------RE 104
G N++G LG +
Sbjct: 217 GYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGIIEKN 276
Query: 105 AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT 164
+ D+ +IP + K V I+AG HS+AL +DGTV+ WG H S G+ G + +
Sbjct: 277 GKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG-----HNSYGVLGSNVGEH 331
Query: 165 PLKLESVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
L V G +V +A+G H V LT G + G GQLGR S S N
Sbjct: 332 SFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGR-ENNSFSLN------ 384
Query: 222 FLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
+P K K +D+V G + I G++ ++G NN QLG +
Sbjct: 385 ------LPYKVKWLDNVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSS----- 433
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD--YGRLGLKNVSEPVTEP 335
+ P +K L++ ++ +G HSLA++ +G ++ +G + + K++ P+ P
Sbjct: 434 --YIPTCVKGLNNA--VLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPL--P 487
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE------------DD 383
I L D IT IA G + +G + WG GN + + D+
Sbjct: 488 IKIGKLND--ITEIAGGLDYILVLRKDGNI--WGCGNDFYFRKFTDSSVSSVTKLIRLDN 543
Query: 384 ILN---------------SEGKIYAFGRHDY-GRLGLKNVSEPVTEPTPIPSLQDKTITS 427
I N ++G ++++G + + N SE +P I L +
Sbjct: 544 IKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSE---KPVKIKGLSG--VVK 598
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+A G S A+ +G ++ WG QLGNG + P++++G LNN V+ +A+G
Sbjct: 599 VAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKG--LNN--VVAIAAGDY 654
Query: 488 HSVILAK 494
HS+ L K
Sbjct: 655 HSMALKK 661
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 221/483 (45%), Gaps = 74/483 (15%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGG 78
V V++ +L K G V + G + GQ DV T + V++L N+V + G
Sbjct: 95 VAVSAGTFHSLALKKDGSVWI-WGHTNYGQRK--SDVYRDFTTPVKVKELKNIVAIAAGW 151
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
++ + DG V+ WG N+ G LG + S +P V K V +SAG HS+AL D
Sbjct: 152 DFSLAVGSDGSVWAWGINNHGELGIGSLKPSA-VPVKVKGLKDVVAVSAGLYHSLALKRD 210
Query: 139 GTVYAWGSFRDSHGSMGLK--GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
GTV++WG D G +G + + P++++ +S ++ I++G H + L G +
Sbjct: 211 GTVWSWGYNED--GELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIW 268
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV--FTGVYNTFISSK--GS 252
G G I +++ ++ +P++ + ++ V Y I+ K G+
Sbjct: 269 G-------GGIIEKNGK---------IDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGT 312
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G N+Y LG G F L++ K +A+G+ HS+AL G I
Sbjct: 313 VWVWGHNSYGVLG------SNVGEHSFL---LVQVKGLKNVVAVAAGRLHSVALTKNGTI 363
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+A+G + +G+LG +N S + P + L + + +IA G + AI +G ++ WG N
Sbjct: 364 WAWGNNAFGQLGRENNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGTVWSWGANN 421
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
QLGNG + PT + L + + + G+
Sbjct: 422 KGQLGNG---------------------------TYKSSYIPTCVKGLNNAVL--VEAGS 452
Query: 433 CVSFAIDSEGVLYGWG-MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S A+D +G ++ WG + + + N K DIL P+ I+ +LN+ T ++A G + ++
Sbjct: 453 QHSLAVDKDGTVWVWGFIESVWSEKNTK--DILSPLPIKIGKLNDIT--EIAGGLDYILV 508
Query: 492 LAK 494
L K
Sbjct: 509 LRK 511
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 179/427 (41%), Gaps = 110/427 (25%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G G LG +V E +F LV+ L NVV V G +H+V LT++G ++ WG
Sbjct: 311 GTVWVWGHNSYGVLG--SNVGEH-SFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWG 367
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW---------- 144
N G LGRE S +P V V I+ G SH++A+ DGTV++W
Sbjct: 368 NNAFGQLGRENNSFSLNLPYKVKWLDNVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGN 427
Query: 145 GSFRDSHGSMGLKG--------EGIQKT-------------------------------P 165
G+++ S+ +KG G Q + P
Sbjct: 428 GTYKSSYIPTCVKGLNNAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLP 487
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-----------R 214
+K+ ++ I +IA G D+ ++L GN+ GC + T S S +
Sbjct: 488 IKIGKLNDITEIAGGLDYILVLRKDGNIW--GCGNDFYFRKFTDSSVSSVTKLIRLDNIK 545
Query: 215 NAR---------------------------RGMSFLEPGEVPLKRKHIDDVF---TGVYN 244
N R +L E P+K K + V G Y+
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEKPVKIKGLSGVVKVAAGKYH 605
Query: 245 TFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ K G++ ++G N Y QLG E F P +K L++ +A+G +HS
Sbjct: 606 SLALKKDGTVWSWGYNAYGQLGNGTRETS-------FVPVRVKGLNN--VVAIAAGDYHS 656
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
+AL +G ++ +G + G+LG +N+ E T P + L + + +IA G+ S A+ +G
Sbjct: 657 MALKKDGTVWVWGSNIRGQLGRRNI-EFSTVPLKVEKLDN--VVAIAAGDTHSVALKKDG 713
Query: 364 VLYGWGM 370
++ WG+
Sbjct: 714 TVWVWGI 720
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 62/402 (15%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSGIVKI 177
K + AG H++A+ +DGTV+AWG + G G G K P++++ + +V +
Sbjct: 43 KVISSGAGSLHTLAIKDDGTVWAWG-----YNGFGQLGNGTYKDSCIPVRVKGLKDVVAV 97
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
++G H + L G++ G GQ R + F P +V + K+I
Sbjct: 98 SAGTFHSLALKKDGSVWIWGHTNYGQ----------RKSDVYRDFTTPVKVK-ELKNIVA 146
Query: 238 VFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G ++ + S GS+ A+G+NN+ +LG + P +K L D +
Sbjct: 147 IAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSA-------VPVKVKGLKD--VVAV 197
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSIACGNCV 355
++G +HSLAL +G ++++G ++ G LG + + V+ P + L D + +I+ G
Sbjct: 198 SAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISAGGFH 255
Query: 356 SFAIDSEGVLYGWGMG---------NGY------------QLGNGKEDDI-LNSEGKIYA 393
S A++ +G ++ WG G N Y + G I L +G ++
Sbjct: 256 SIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWV 315
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + YG LG NV E + L K + ++A G S A+ G ++ WG
Sbjct: 316 WGHNSYGVLG-SNVGEHSFLLVQVKGL--KNVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 454 QLGNGKEDDILE-PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QLG L P K+ K L+N V+ +A+GG H++ + +
Sbjct: 373 QLGRENNSFSLNLPYKV--KWLDN--VVAIATGGSHTLAIKR 410
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G GQLG +E T L VE LDNVV + G H+V L +DG V+ WG
Sbjct: 663 GTVWVWGSNIRGQLGRRN--IEFSTVPLKVEKLDNVVAIAAGDTHSVALKKDGTVWVWGI 720
Query: 96 NDEGALGREAEGDSEFIPQTVNL 118
+ L +E S IP +
Sbjct: 721 ECDRDLSKEILSSSS-IPVQIKF 742
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 172/349 (49%), Gaps = 38/349 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VLT GQ GQLG G + +RK V+DL+NV + G H+V LT DG V+TWG N
Sbjct: 77 GTVLTWGQNMHGQLGDGTNT-DRKIPVQVKDLNNVTAIAGGAWHSVALTSDGTVWTWGSN 135
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + S P VN K I++ H++AL DGTV+ WG R+ +G +G
Sbjct: 136 WAGQLG-DGTTKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTVWTWG--RNIYGQLGD 192
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASR 214
+ TP++ S++ I+ IA G H + + G + T G + GQL G IT R+
Sbjct: 193 GTTTDRNTPVQTRSLNTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRT--- 249
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+P+ I DV G ++ + + G+I +G N + QLG+ ++
Sbjct: 250 -------------IPVLVNGIKDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTD 296
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ TP + L K + G HSL L S+G ++ +G ++ G+LG
Sbjct: 297 NRS-------TPVPMGDL--KNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLG---DGT 344
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
++ TPI + +T+IA G S A+ S+G ++ WG QLG+G
Sbjct: 345 TMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDG 393
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 180/374 (48%), Gaps = 51/374 (13%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q+S G HS+AL DGTV WG ++ HG +G +K P++++ ++ + IA GA
Sbjct: 61 LQVSGGSFHSIALKSDGTVLTWG--QNMHGQLGDGTNTDRKIPVQVKDLNNVTAIAGGAW 118
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H V LTS G + T G GQLG T +S RN +P +V + G+
Sbjct: 119 HSVALTSDGTVWTWGSNWAGQLGDGTTKS--RN--------KPVQVNNLKNITAIASKGL 168
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+N + S G++ +G N Y QLG+ + T TP +SL+ +A G +H
Sbjct: 169 HNLALKSDGTVWTWGRNIYGQLGDGTT-------TDRNTPVQTRSLN--TIISIAGGGYH 219
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
SLA ++G I+ +G + YG+LG ++ T P + ++D ++ I CG S + +
Sbjct: 220 SLAQKADGTIWTWGLNQYGQLGDGTITNR-TIPVLVNGIKD--VSMIRCGGDHSIVLKNN 276
Query: 363 GVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHD 398
G ++ WG QLG+ D+ IL S+G ++ +G ++
Sbjct: 277 GTIWIWGFNQHGQLGDRSTDNRSTPVPMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNE 336
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
G+LG ++ TPI + +T+IA G S A+ S+G ++ WG QLG+G
Sbjct: 337 NGQLG---DGTTMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDG 393
Query: 459 KEDDILEPMKIEGK 472
+ P+ ++ K
Sbjct: 394 SISNRSTPVLVKIK 407
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 34/183 (18%)
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
+T PI + TI ++ G+ S A+ S+G + WG QLG+G D
Sbjct: 49 ITTRIPIFA---STILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVK 105
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L S+G ++ +G + G+LG ++ +P + +L K IT+
Sbjct: 106 DLNNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLG-DGTTKSRNKPVQVNNL--KNITA 162
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IA + A+ S+G ++ WG QLG+G D P ++ + LN T++ +A GG
Sbjct: 163 IASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTP--VQTRSLN--TIISIAGGGY 218
Query: 488 HSV 490
HS+
Sbjct: 219 HSL 221
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+T PI + TI ++ G+ S A+ S+G + WG QLG+G D P+++
Sbjct: 49 ITTRIPIFA---STILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQV- 104
Query: 471 GKQLNNYTVLQVASGGQHSVILA 493
K LNN T +A G HSV L
Sbjct: 105 -KDLNNVTA--IAGGAWHSVALT 124
>gi|401837583|gb|EJT41494.1| SRM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 482
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 175/397 (44%), Gaps = 63/397 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L ED V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEVKIISFAVGGMHTLALDEDSNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDASDLSDDEDGDLNELESTPAKIPRDCFPPLTKGHKI 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ+ A D+ S AL +G VYAWG+FR + G +G E IQ TP KL + S IV++A
Sbjct: 168 VQLGATDNMSCALFSNGEVYAWGTFRCNEGILGFYQEKIKIQTTPWKLPTFSKFNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHVLFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDP--RPFGLRHVKYI 279
Query: 239 FTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K + ++++GLN + Q G SE + G P + D +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SENVEDG-ALVTKPKKLPLPEDVIVRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L +G +Y+ GR D G+ P P+P+
Sbjct: 337 AGEHHSLILCQDGDLYSCGRLDMFEAGIPKSDLPEYTYNDVHGKARAIPLPTKLKNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
++A G+ S A+ G+ Y WG G Y +G G +D
Sbjct: 397 KAVAAGSHHSIAVAQNGIAYSWGFGETYAVGLGPSED 433
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 30/263 (11%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ F GS+ GL ++ + EV++ F +K +S A G H+
Sbjct: 47 DIFCWGTGSMCELGLGPLAK----NKEVKRPRLNPFLPRDEVKIIS------FAVGGMHT 96
Query: 304 LALNSEGKIYAFGRHDYGRLG--LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
LAL+ + ++++G +D G LG N E + + L D + I
Sbjct: 97 LALDEDSNVWSWGCNDVGALGRDTSNAKEQLKD-MDASDLSDDEDGDLNELESTPAKIPR 155
Query: 362 EGVLYGWGMGNGYQLGN-GKEDDI---LNSEGKIYAFG--RHDYGRLGLKNVSEPV-TEP 414
+ + G+++ G D++ L S G++YA+G R + G LG + T P
Sbjct: 156 DCFP---PLTKGHKIVQLGATDNMSCALFSNGEVYAWGTFRCNEGILGFYQEKIKIQTTP 212
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK---IEG 471
+P+ I +A G +D EG+++ WG G QLG ++E + ++
Sbjct: 213 WKLPTFSKFNIVQLAPGKDHVLFLDEEGMVFAWGNGQQNQLGR----KVMERFRLKTLDP 268
Query: 472 KQLNNYTVLQVASGGQHSVILAK 494
+ V +ASG H L K
Sbjct: 269 RPFGLRHVKYIASGENHCFALTK 291
>gi|403216393|emb|CCK70890.1| hypothetical protein KNAG_0F02230 [Kazachstania naganishii CBS
8797]
Length = 474
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 198/438 (45%), Gaps = 73/438 (16%)
Query: 3 HLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP-----DVM 57
H+ KK R ++ ++ + + + L + G G +LGLGP +V
Sbjct: 14 HVEKKAARPMSKTHARAIVNSVDDHKHLYVSVKPLDIFCWGTGSMCELGLGPLAKNKEVK 73
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP---- 113
+ + +E + +V VGGMHTV + G V+TWGCND ALGR+ G E +
Sbjct: 74 RPRLNSFLEGAE-IVSFAVGGMHTVAVDAKGGVWTWGCNDVCALGRDTSGAKEMLKDMDD 132
Query: 114 --------------------------QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
Q + K Q+ A D+ + L +G VYAWG+F
Sbjct: 133 ADADDDDDGDLNELESTPTKLDSSLFQPLAEGHKVAQVVATDNLTCILFTNGAVYAWGTF 192
Query: 148 RDSHGSMGLKGEG--IQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
R + G +G E IQ TP ++ S IV++A G DH + L G + T G +Q Q
Sbjct: 193 RSNEGILGFYKEDIKIQSTPWEIPIFSKFKIVQMAGGKDHVIFLDEAGVVFTWGNGQQYQ 252
Query: 204 LGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
LGR + R R L+P P+ KH+ V TG + F + + G+++++GLN +
Sbjct: 253 LGRKVMDRYKERT-------LDP--RPIGLKHVKYVATGENHCFALKTDGTLVSWGLNQF 303
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSL-SDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Q G E++ G P + SL D+K + G+HHS+ + +G +Y GR D
Sbjct: 304 GQCG-VSREIRDGG--LVTKPTRVISLPPDRKIKCVTGGEHHSIFVMDDGSMYTCGRLDM 360
Query: 321 GRLGLKNVSEP--------------VTEPTPIPS-LQDKTITSIACGNCVSFAIDSEGVL 365
+G+ + P + PT +PS ++ KT T+ G+ S A+ +G +
Sbjct: 361 CEVGISKETAPEPNRYTDEHGRIRALPVPTQLPSDIKYKTATA---GSHHSVAVSRDGKM 417
Query: 366 YGWGMGNGYQLGNGKEDD 383
Y WG Y +G G +D
Sbjct: 418 YSWGFAETYAVGLGPNED 435
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 144/329 (43%), Gaps = 36/329 (10%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC--NDEGALGREAEGDSEF 111
P ++ F + + V +VV T L +G VY WG ++EG LG E D +
Sbjct: 150 PTKLDSSLFQPLAEGHKVAQVVATDNLTCILFTNGAVYAWGTFRSNEGILGFYKE-DIKI 208
Query: 112 IPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--- 164
+P K VQ++ G H + L E G V+ WG+ + + ++T
Sbjct: 209 QSTPWEIPIFSKFKIVQMAGGKDHVIFLDEAGVVFTWGNGQQYQLGRKVMDRYKERTLDP 268
Query: 165 -PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
P+ L+ V +A+G +H L + G L++ G + GQ G SR R G
Sbjct: 269 RPIGLKHVK---YVATGENHCFALKTDGTLVSWGLNQFGQCG------VSREIRDGGLVT 319
Query: 224 EPGEV---PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
+P V P RK I V G +++ F+ GS+ G + ++G E N
Sbjct: 320 KPTRVISLPPDRK-IKCVTGGEHHSIFVMDDGSMYTCGRLDMCEVG-ISKETAPEPNRYT 377
Query: 280 FTPHLIKSL-------SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEP 331
I++L SD K+ +G HHS+A++ +GK+Y++G + +GL N +
Sbjct: 378 DEHGRIRALPVPTQLPSDIKYKTATAGSHHSVAVSRDGKMYSWGFAETYAVGLGPNEDDD 437
Query: 332 VTEPTPI--PSLQDKTITSIACGNCVSFA 358
V PT I + +D I + CG S A
Sbjct: 438 VEVPTAIENTATRDVEIVFVGCGGQFSVA 466
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 154/393 (39%), Gaps = 89/393 (22%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-----------RSASRNARRGMSF 222
IV A G H V + ++G + T GC + LGR T A + ++
Sbjct: 86 IVSFAVGGMHTVAVDAKGGVWTWGCNDVCALGRDTSGAKEMLKDMDDADADDDDDGDLNE 145
Query: 223 LE--PGEV------PLKRKH--IDDVFTGVYNTFISSKGSILAFGL--NNYSQLG--EAD 268
LE P ++ PL H V T + + G++ A+G +N LG + D
Sbjct: 146 LESTPTKLDSSLFQPLAEGHKVAQVVATDNLTCILFTNGAVYAWGTFRSNEGILGFYKED 205
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRLGL 325
++Q TP I S K +A G+ H + L+ G ++ +G ++ GR +
Sbjct: 206 IKIQS-------TPWEIPIFSKFKIVQMAGGKDHVIFLDEAGVVFTWGNGQQYQLGRKVM 258
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE---- 381
E +P PI K + +A G FA+ ++G L WG+ Q G +E
Sbjct: 259 DRYKERTLDPRPIGL---KHVKYVATGENHCFALKTDGTLVSWGLNQFGQCGVSREIRDG 315
Query: 382 ---------------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP---- 410
+ +G +Y GR D +G+ + P
Sbjct: 316 GLVTKPTRVISLPPDRKIKCVTGGEHHSIFVMDDGSMYTCGRLDMCEVGISKETAPEPNR 375
Query: 411 ----------VTEPTPIPS-LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG- 458
+ PT +PS ++ KT T+ G+ S A+ +G +Y WG Y +G G
Sbjct: 376 YTDEHGRIRALPVPTQLPSDIKYKTATA---GSHHSVAVSRDGKMYSWGFAETYAVGLGP 432
Query: 459 -KEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
++DD+ P IE + ++ V GGQ SV
Sbjct: 433 NEDDDVEVPTAIENTATRDVEIVFVGCGGQFSV 465
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 63/301 (20%)
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS---EVQKSG-- 275
SFLE E+ + G++ + +KG + +G N+ LG S E+ K
Sbjct: 79 SFLEGAEI------VSFAVGGMHTVAVDAKGGVWTWGCNDVCALGRDTSGAKEMLKDMDD 132
Query: 276 -----------NTCFFTP-----HLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFG-- 316
N TP L + L++ K + + + + L + G +YA+G
Sbjct: 133 ADADDDDDGDLNELESTPTKLDSSLFQPLAEGHKVAQVVATDNLTCILFTNGAVYAWGTF 192
Query: 317 RHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
R + G LG K + + P IP I +A G +D GV++ WG G YQ
Sbjct: 193 RSNEGILGFYKEDIKIQSTPWEIPIFSKFKIVQMAGGKDHVIFLDEAGVVFTWGNGQQYQ 252
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
L GR + E +P PI K + +A G
Sbjct: 253 L-----------------------GRKVMDRYKERTLDPRPIGL---KHVKYVATGENHC 286
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
FA+ ++G L WG+ Q G +E + +P ++ L ++ +GG+H I
Sbjct: 287 FALKTDGTLVSWGLNQFGQCGVSREIRDGGLVTKPTRV--ISLPPDRKIKCVTGGEHHSI 344
Query: 492 L 492
Sbjct: 345 F 345
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 26/241 (10%)
Query: 265 GEADSEVQKSGNTCFFTPH---LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
G AD V+K H ++ S+ D K H I+ +G
Sbjct: 9 GTADGHVEKKAARPMSKTHARAIVNSVDDHK---------HLYVSVKPLDIFCWGTGSMC 59
Query: 322 RLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LGL +++ V P L+ I S A G + A+D++G ++ WG + LG
Sbjct: 60 ELGLGPLAKNKEVKRPRLNSFLEGAEIVSFAVGGMHTVAVDAKGGVWTWGCNDVCALGR- 118
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI------PSLQDKTITSIACGNC 433
D ++ + D +++E + PT + P + + + +
Sbjct: 119 ---DTSGAKEMLKDMDDADADDDDDGDLNELESTPTKLDSSLFQPLAEGHKVAQVVATDN 175
Query: 434 VSFAIDSEGVLYGWGM--GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
++ + + G +Y WG N LG KED ++ E + + ++Q+A G H +
Sbjct: 176 LTCILFTNGAVYAWGTFRSNEGILGFYKEDIKIQSTPWEIPIFSKFKIVQMAGGKDHVIF 235
Query: 492 L 492
L
Sbjct: 236 L 236
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 211/468 (45%), Gaps = 56/468 (11%)
Query: 27 VPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
V TL K G + GQ + GQLGLG D +R T A V + V GG +T+ + +
Sbjct: 133 VHTLAMKADG-TLWAWGQNNVGQLGLG-DTEKRDTPAQVGSDTDWAAVSAGGAYTLAVKD 190
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
DG ++ WG N G LG + D P+ V V +SAG H++AL DGT++AWG
Sbjct: 191 DGTLWAWGENYFGQLGL-GDTDDRHAPEQVGSDSDWVAVSAGRHHTLALKADGTLWAWG- 248
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
R+ G +GL G + P ++ S S + G H + + G L + G GQLG
Sbjct: 249 -RNYFGQLGLGGTTNRNAPEQVGSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGL 307
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R + G V G+ +T + + G++ A+G N + QLG
Sbjct: 308 GDTVERRRPEQVG-----------NDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLG 356
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D++ + + P ++ SD + L +GQ +SLA+ ++G ++++G +D+G LGL
Sbjct: 357 LGDTDNRDA-------P--VQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGL 407
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------ 379
+ + P ++ G + + ++G L WG + +LG G
Sbjct: 408 GDTDD---RHAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYIT 464
Query: 380 ------KEDDI------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
E D + ++G ++ +GR+ G+LGL + + P+
Sbjct: 465 SPLQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDD---RHAPVQVGG 521
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
D TS++ G + A+ ++G L+GWG QLG G DD P ++
Sbjct: 522 DSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERV 569
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 226/488 (46%), Gaps = 64/488 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
+Q + S V V++ TL K G + G+ GQLGLG R V +
Sbjct: 217 EQVGSDSDWVAVSAGRHHTLALKADG-TLWAWGRNYFGQLGLGG-TTNRNAPEQVGSHSD 274
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS--EFIPQTVNLPKKAVQISAG 128
V+ G H++ + EDG +++WG N+ G LG GD+ P+ V +SAG
Sbjct: 275 WAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGL---GDTVERRRPEQVGNDSDWATVSAG 331
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLT 188
H++A+ DGT++AWG + G +GL + P+++ S + + +G + + +
Sbjct: 332 LLHTLAVKNDGTLWAWGG--NGFGQLGLGDTDNRDAPVQVGSDNDWAALNAGQRYSLAVK 389
Query: 189 SRGNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ G+L + G + G+LG R A GM + V G+Y+T
Sbjct: 390 NDGSLWSWGWNDFGELGLGDTDDRHAPEQVGGGMEWAA-------------VTAGMYHTL 436
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ + G++ A+G N++ +LG G + T L +++++ + ++GQ+ + A
Sbjct: 437 GVKADGTLRAWGRNDFGELG--------LGVMVYITSPL-QTVTEADWAAASAGQYQTQA 487
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ ++G ++ +GR+ G+LGL + + P+ D TS++ G + A+ ++G L
Sbjct: 488 VKADGSLWGWGRNHSGQLGLGDTDD---RHAPVQVGGDSDWTSLSVGREHTLAVKADGTL 544
Query: 366 YGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGR 401
+GWG QLG G DD + +G ++A+GR+ +G+
Sbjct: 545 WGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQ 604
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LGL + + P+ D +++ G+ + A+ ++G L+ WG + QLG G D
Sbjct: 605 LGLGDTNN---RDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTD 661
Query: 462 DILEPMKI 469
+ P ++
Sbjct: 662 NRDVPEQV 669
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 60/445 (13%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPKKAVQISAGDSH 131
+ GG+HT+ + DG ++ WG N+ G LG GD+E P V +SAG ++
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGL---GDTEKRDTPAQVGSDTDWAAVSAGGAY 184
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
++A+ +DGT++AWG + G +GL + P ++ S S V +++G H + L + G
Sbjct: 185 TLAVKDDGTLWAWG--ENYFGQLGLGDTDDRHAPEQVGSDSDWVAVSAGRHHTLALKADG 242
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
L G GQLG + +RNA P +V + ++ + G
Sbjct: 243 TLWAWGRNYFGQLG--LGGTTNRNA--------PEQVGSHSDWAGVIGGDRHSLAVREDG 292
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ ++G NN QLG D+ ++ P + + SD + +++G H+LA+ ++G
Sbjct: 293 TLWSWGQNNVGQLGLGDTVERRR-------PEQVGNDSD--WATVSAGLLHTLAVKNDGT 343
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++A+G + +G+LGL + P+ D ++ G S A+ ++G L+ WG
Sbjct: 344 LWAWGGNGFGQLGLGDTDN---RDAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWN 400
Query: 372 NGYQLGNGKEDDI------------------------LNSEGKIYAFGRHDYGRLGLKNV 407
+ +LG G DD + ++G + A+GR+D+G LGL +
Sbjct: 401 DFGELGLGDTDDRHAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVM 460
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
V +P+ ++ + + + G + A+ ++G L+GWG + QLG G DD P+
Sbjct: 461 ---VYITSPLQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPV 517
Query: 468 KIEGKQLNNYTVLQVASGGQHSVIL 492
++ G +++T L V G +H++ +
Sbjct: 518 QVGGD--SDWTSLSV--GREHTLAV 538
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 216/485 (44%), Gaps = 58/485 (11%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
+Q N S V++ + TL K G + G G GQLGLG D R V ++
Sbjct: 317 EQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNG-FGQLGLG-DTDNRDAPVQVGSDND 374
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
+ G +++ + DG +++WG ND G LG + D P+ V + ++AG
Sbjct: 375 WAALNAGQRYSLAVKNDGSLWSWGWNDFGELGL-GDTDDRHAPEQVGGGMEWAAVTAGMY 433
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
H++ + DGT+ AWG R+ G +GL +PL+ + + ++G + +
Sbjct: 434 HTLGVKADGTLRAWG--RNDFGELGLGVMVYITSPLQTVTEADWAAASAGQYQTQAVKAD 491
Query: 191 GNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
G+L G GQLG R A + + + R+H +
Sbjct: 492 GSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDSDWTS---LSVGREHT---------LAVK 539
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G++ +G N QLG D++ +K TP + S SD + +++G ++LA+
Sbjct: 540 ADGTLWGWGQNYNGQLGLGDTDDRK-------TPERVGSDSD--WATVSAGTGYTLAVKD 590
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G ++A+GR+ +G+LGL + + P+ D +++ G+ + A+ ++G L+ W
Sbjct: 591 DGTLWAWGRNSHGQLGLGDTNN---RDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWAW 647
Query: 369 GMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGL 404
G + QLG G D+ + ++G ++A+GR+ G+LGL
Sbjct: 648 GRNSDGQLGLGDTDNRDVPEQVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGL 707
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ E P D ++ G + AI ++G L+GWG+ QLG G D
Sbjct: 708 GDTDE---RHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGRH 764
Query: 465 EPMKI 469
PM++
Sbjct: 765 APMQV 769
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 215/481 (44%), Gaps = 59/481 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + + GQ + GQLGLG D +ER+ V + + V G +HT+ + DG ++ WG N
Sbjct: 292 GTLWSWGQNNVGQLGLG-DTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGN 350
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + D+ P V ++AG +S+A+ DG++++WG + G +GL
Sbjct: 351 GFGQLGL-GDTDNRDAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWG--WNDFGELGL 407
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P ++ + +G H + + + G L G + G+LG
Sbjct: 408 GDTDDRHAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGV-------- 459
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSG 275
M ++ + G Y T + + GS+ +G N+ QLG D++ + +
Sbjct: 460 ---MVYITSPLQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHA- 515
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P ++ D +T L+ G+ H+LA+ ++G ++ +G++ G+LGL + +
Sbjct: 516 ------P--VQVGGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDD---RK 564
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------ 383
TP D +++ G + A+ +G L+ WG + QLG G ++
Sbjct: 565 TPERVGSDSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDND 624
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ ++G ++A+GR+ G+LGL + P D +++ G
Sbjct: 625 WAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDN---RDVPEQVGSDTDWAAVSTG 681
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ + A+ ++G L+ WG + QLG G D+ P ++ G + V +G QH++
Sbjct: 682 SGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGG----DSDWAAVTAGWQHTLA 737
Query: 492 L 492
+
Sbjct: 738 I 738
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G+ GQLGLG D R V ++ V G HT+ + DG ++ WG N
Sbjct: 592 GTLWAWGRNSHGQLGLG-DTNNRDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRN 650
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+G LG + D+ +P+ V +S G H++A+ DGT++AWG R+S G +GL
Sbjct: 651 SDGQLGL-GDTDNRDVPEQVGSDTDWAAVSTGSGHTLAVKTDGTLWAWG--RNSDGQLGL 707
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P ++ S + +G H + + + G L G GQLG
Sbjct: 708 GDTDERHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLG----------- 756
Query: 217 RRGMSFLEPGEVPLKRKHIDD---VFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ + P++ D V G Y+T + G++ A+G N + QLG+
Sbjct: 757 ---LGDTDGRHAPMQVGSDSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQ 807
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
Q + + V++ + TL K G + G+ GQLGLG D R V +
Sbjct: 618 QVASDNDWAAVSAGSRHTLAVKNDG-TLWAWGRNSDGQLGLG-DTDNRDVPEQVGSDTDW 675
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V G HT+ + DG ++ WG N +G LG + D P+ V ++AG H
Sbjct: 676 AAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGL-GDTDERHAPEQVGGDSDWAAVTAGWQH 734
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
++A+ DGT++ WG + +G +GL + P+++ S S +A+G H + + G
Sbjct: 735 TLAIKNDGTLWGWG--LNLYGQLGLGDTDGRHAPMQVGSDSDWATVAAGRYHTLAVKDDG 792
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
L G GQLG+ T R F +P EVP
Sbjct: 793 TLRAWGRNRFGQLGQRTYR-----------FDQPQEVP 819
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 30/201 (14%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
F +LA+G H+LA+ ++G ++A+G+++ G+LGL + + TP D +++ G
Sbjct: 125 FPVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEK---RDTPAQVGSDTDWAAVSAG 181
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSE 388
+ A+ +G L+ WG QLG G DD L ++
Sbjct: 182 GAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGSDSDWVAVSAGRHHTLALKAD 241
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G ++A+GR+ +G+LGL + P + S D + G+ S A+ +G L+ WG
Sbjct: 242 GTLWAWGRNYFGQLGLGGTTNR-NAPEQVGSHSD--WAGVIGGDRHSLAVREDGTLWSWG 298
Query: 449 MGNGYQLGNGKEDDILEPMKI 469
N QLG G + P ++
Sbjct: 299 QNNVGQLGLGDTVERRRPEQV 319
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 184/377 (48%), Gaps = 31/377 (8%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVE 73
P ++V S G +V + G+G+ GQLG G D ER ++ LD+ +
Sbjct: 12 PRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHG-DAEERHLPLVISALDDCEISS 70
Query: 74 VVVGGMHTVCLTEDGK-VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDS 130
+ G HT +E + VY+WG D G LG D FIP+ + K + QI+ GDS
Sbjct: 71 ITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDL-FIPRAIKGLKGLEIKQIACGDS 129
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLT 188
H +A+ DG V++WG R+ +G +GL P K+ + GI +A+GA+H +T
Sbjct: 130 HCLAITGDGEVHSWG--RNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVT 187
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF- 246
G L G G LG RN R L PGEV + + ++ V G +T
Sbjct: 188 ESGKLYGWGWGRYGNLGL-----GDRNDR-----LVPGEVAAVPGEKMNLVACGWRHTIA 237
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+++ G++ FG + Y QLG D E PH +++L +K ++ G H++AL
Sbjct: 238 VANSGNLYTFGWSKYGQLGHGDFEDH-------LVPHQVQALKNKTIQAVSGGWRHTVAL 290
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ +G++Y +G + +G++G N + P I + ++ +T + CG + AI G +Y
Sbjct: 291 DEDGELYGWGWNKFGQVGCGNTDDH-NSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVY 349
Query: 367 GWGMGNGYQLGNGKEDD 383
WG G QLG+G D
Sbjct: 350 SWGRGTSGQLGHGDAVD 366
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 159/352 (45%), Gaps = 58/352 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ +++GA H V L S + + G E GQLG E +PL
Sbjct: 16 VISVSAGASHTVALLSGDLVCSWGRGEDGQLGH--------------GDAEERHLPLVIS 61
Query: 234 HIDD-----VFTGVYNTFISSKGS--ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
+DD + G +T S+ + + ++G ++ +LG +S + F P IK
Sbjct: 62 ALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNS-------SDLFIPRAIK 114
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
L + +A G H LA+ +G+++++GR+ G+LGL + +E V P + + + +
Sbjct: 115 GLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH-TEDVLVPNKVAAFEGIAV 173
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL--------------------- 385
+A G + A+ G LYGWG G LG G +D L
Sbjct: 174 KMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWR 233
Query: 386 -----NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ G +Y FG YG+LG + + + P + +L++KTI +++ G + A+D
Sbjct: 234 HTIAVANSGNLYTFGWSKYGQLGHGDFEDHLV-PHQVQALKNKTIQAVSGGWRHTVALDE 292
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+G LYGWG Q+G G DD P I G + N V +V G +H+V +
Sbjct: 293 DGELYGWGWNKFGQVGCGNTDDHNSPKLITG--IVNEKVTRVTCGWRHTVAI 342
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 151/330 (45%), Gaps = 31/330 (9%)
Query: 38 VVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V + G GD G+LG G D+ + ++ L+ + ++ G H + +T DG+V++WG
Sbjct: 87 TVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLE-IKQIACGDSHCLAITGDGEVHSWGR 145
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG D + AV+ ++AG H+ A+ E G +Y WG R +G++
Sbjct: 146 NQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGR--YGNL 203
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL + P ++ +V G + +A G H + + + GNL T G + GQLG
Sbjct: 204 GLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFE-- 261
Query: 213 SRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
L P +V LK K I V G +T + G + +G N + Q+G +++
Sbjct: 262 --------DHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTD 313
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
S P LI + ++K T + G H++A+ G +Y++GR G+LG + +
Sbjct: 314 DHNS-------PKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVD 366
Query: 331 PVT----EPTPIPSLQDKTITSIACGNCVS 356
E L + I S GNC S
Sbjct: 367 RCVPKRIELLSADGLACQGIESSPSGNCAS 396
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
++ +++G H++AL S + ++GR + G+LG + E P I +L D I+SI
Sbjct: 14 RRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALDDCEISSIT 72
Query: 351 CG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
CG + + +S +Y WG G D+GRLG N S+
Sbjct: 73 CGADHTTARSESTRTVYSWGWG--------------------------DFGRLGHGNSSD 106
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
P I L+ I IACG+ AI +G ++ WG QLG G +D+L P K+
Sbjct: 107 LFI-PRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKV 165
Query: 470 EGKQLNNYTVLQVASGGQHSVILAK 494
V +A+G +H+ + +
Sbjct: 166 --AAFEGIAVKMLAAGAEHTAAVTE 188
>gi|410074851|ref|XP_003955008.1| hypothetical protein KAFR_0A04380 [Kazachstania africana CBS 2517]
gi|372461590|emb|CCF55873.1| hypothetical protein KAFR_0A04380 [Kazachstania africana CBS 2517]
Length = 485
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 174/399 (43%), Gaps = 65/399 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D +V VGGMHT+ L D +++
Sbjct: 49 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPHDEAKIVSFAVGGMHTLALDSDNNIWS 108
Query: 93 WGCNDEGALGREAEGDSE--------------------------FIPQTVNLP----KKA 122
WGCND GALGR+ G E IP+ P K
Sbjct: 109 WGCNDVGALGRDTSGAKENLKDMDKEDSSDDDDGDLNELESTPSKIPRECFPPLADGHKI 168
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVSG--IVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQ TP K+ S S +V++A
Sbjct: 169 VQLAATDNLSCALFSNGDVYAWGTFRCNEGILGFYQDKIKIQLTPWKVPSFSKYRVVQLA 228
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QL R R + L+P P +HI +
Sbjct: 229 PGKDHILFLDEEGVVFAWGNGQQYQLARKVMD------RFRLKTLDPR--PFGLRHIKYI 280
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK--KFTM 295
+G + F + + ++GLN + Q G SE + G P + D+ K
Sbjct: 281 ASGENHCFAVDKDDKVYSWGLNQFGQCGI--SENVEDG-ALVIKPKKVLLPKDEGIKIKS 337
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-----------PTPIPSLQDK 344
+++G+HHSL L EG ++ FGR D +G+ P T P P
Sbjct: 338 ISAGEHHSLILTQEGDLFTFGRLDMFEVGVSKSRLPETTYKDEHDKARSIPIPFKMSDVP 397
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+IA G+ S A+ + G+ Y WG G Y +G G D
Sbjct: 398 KFKTIAAGSHHSLAVAANGIAYSWGFGETYAVGLGPSGD 436
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 165/428 (38%), Gaps = 89/428 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + IV A G H + L S N+
Sbjct: 49 IFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPHDEAKIVSFAVGGMHTLALDSDNNI 106
Query: 194 LTAGCPEQGQLGRITQRSASRNARRG------------MSFLE--PGEVPLK-------- 231
+ GC + G LGR T A N + ++ LE P ++P +
Sbjct: 107 WSWGCNDVGALGRDTS-GAKENLKDMDKEDSSDDDDGDLNELESTPSKIPRECFPPLADG 165
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEADSEVQKSGNTCFFTPHLIKSLS 289
K + T + + S G + A+G ++ LG +++ TP + S S
Sbjct: 166 HKIVQLAATDNLSCALFSNGDVYAWGTFRCNEGILGFYQDKIKIQ-----LTPWKVPSFS 220
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+ LA G+ H L L+ EG ++A+G ++ R + +P P + I
Sbjct: 221 KYRVVQLAPGKDHILFLDEEGVVFAWGNGQQYQLARKVMDRFRLKTLDPRPFGL---RHI 277
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDD--------------------- 383
IA G FA+D + +Y WG+ Q G + ED
Sbjct: 278 KYIASGENHCFAVDKDDKVYSWGLNQFGQCGISENVEDGALVIKPKKVLLPKDEGIKIKS 337
Query: 384 ---------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-----------PTPIPSLQDK 423
IL EG ++ FGR D +G+ P T P P
Sbjct: 338 ISAGEHHSLILTQEGDLFTFGRLDMFEVGVSKSRLPETTYKDEHDKARSIPIPFKMSDVP 397
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQV 482
+IA G+ S A+ + G+ Y WG G Y +G G DD P +I+ ++ ++ V
Sbjct: 398 KFKTIAAGSHHSLAVAANGIAYSWGFGETYAVGLGPSGDDTEVPTRIKNTATQDHNIILV 457
Query: 483 ASGGQHSV 490
GGQ SV
Sbjct: 458 GCGGQFSV 465
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 110/296 (37%), Gaps = 65/296 (21%)
Query: 233 KHIDDVFTGVYNTFISSKG-SILAFGLNNYSQLG----EADSEVQKSGNTCFFTPHLIKS 287
KH+ + + +IS + I +G + +LG + EV++ F PH
Sbjct: 28 KHVINTQDDYKHMYISVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFL-PH---- 82
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-------------------- 327
+ K A G H+LAL+S+ I+++G +D G LG
Sbjct: 83 -DEAKIVSFAVGGMHTLALDSDNNIWSWGCNDVGALGRDTSGAKENLKDMDKEDSSDDDD 141
Query: 328 --VSEPVTEPTPIPS-----LQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
++E + P+ IP L D I +A + +S A+ S G +Y WG
Sbjct: 142 GDLNELESTPSKIPRECFPPLADGHKIVQLAATDNLSCALFSNGDVYAWGTF-------- 193
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAI 438
R + G LG + P +PS + +A G +
Sbjct: 194 ----------------RCNEGILGFYQDKIKIQLTPWKVPSFSKYRVVQLAPGKDHILFL 237
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
D EGV++ WG G YQL K D ++ + + +ASG H + K
Sbjct: 238 DEEGVVFAWGNGQQYQLAR-KVMDRFRLKTLDPRPFGLRHIKYIASGENHCFAVDK 292
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 227/499 (45%), Gaps = 86/499 (17%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM---------HTVCLTED 87
G V G +GQLG G R T V L +V+ V GG H++ L D
Sbjct: 320 GTVWAWGNNSSGQLGDG-TTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD 378
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS------AGDSHSVALLEDGTV 141
G V+ WG N L R+ GD +P T P + +++ AGD H+V L DGTV
Sbjct: 379 GTVWAWGYN----LSRQ-FGDG--MPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTV 431
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+AWG +S G +G ++ P+++ ++ I +A+G H V + S G + G +
Sbjct: 432 WAWGD--NSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRR 489
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFG 257
GQLG + E+P++ + + ++ + GS+ +G
Sbjct: 490 GQLG--------------IGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWG 535
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N Y QLG+ + + ++ T + L+D T LA+G HHSLAL ++G ++ +G
Sbjct: 536 SNAYGQLGDG-TAIDRA------TAAQVPGLTD--ITALAAGNHHSLALRNDGTVWVWGS 586
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+D+G+LG V+ + TP+ + ++ G S A+ G ++ WG + QLG
Sbjct: 587 NDFGQLGDGTVT---SRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLG 643
Query: 378 NGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
+G L ++G ++A+G ++ G+LG S +
Sbjct: 644 DGTVTSRAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLG-NGTSGIQST 702
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P +P L + ++A GN S A+ ++G ++GWG + QLG+G P ++ G
Sbjct: 703 PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG-- 758
Query: 474 LNNYTVLQVASGGQHSVIL 492
L N V+ + +G ++V L
Sbjct: 759 LTN--VIALNAGAFYTVAL 775
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 210/459 (45%), Gaps = 58/459 (12%)
Query: 59 RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL 118
R T V +L +V G +H V L DG V+ WG N G LG E P V+
Sbjct: 400 RTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLG-EGVTPVRAKPMQVSG 458
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
++ GD HSVA+ DG ++AWG R G +G+ ++ P++ ++ I +A
Sbjct: 459 LAAITALATGDGHSVAVGSDGGIWAWGDNR--RGQLGIGITATREIPVQATGLASISALA 516
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G H + L G++ T G GQLG T R + PG I +
Sbjct: 517 AGDSHSLALRGNGSVWTWGSNAYGQLGDGTA------IDRATAAQVPG-----LTDITAL 565
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +++ + + G++ +G N++ QLG+ +K TP + LS + +
Sbjct: 566 AAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRK-------TPVQVSGLSAMR--AVE 616
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G HS+A++ G ++ +G +D+G+LG V+ + P+ +T++A G S
Sbjct: 617 AGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVT---SRAMPVQVSGLTGVTAVAVGVYHSL 673
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKE------------------------DDILNSEGKIYA 393
A+ ++G L+ WG N QLGNG L ++G ++
Sbjct: 674 ALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNGHSLALRTDGTVWG 733
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + +G+LG + P + PT +P L + + ++ G + A+ SE ++ WG +
Sbjct: 734 WGANSFGQLG-DGTTTPRSTPTQVPGLTN--VIALNAGAFYTVALRSERSVWEWGSKSAG 790
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G P+++ G L + T L A+G H++ L
Sbjct: 791 QLGDGTVTQKTTPVQVSG--LTDVTAL--AAGNAHALAL 825
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 210/463 (45%), Gaps = 63/463 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G + K V L + + G H+V + DG ++ WG N
Sbjct: 429 GTVWAWGDNSSGQLGEGVTPVRAKPMQ-VSGLAAITALATGDGHSVAVGSDGGIWAWGDN 487
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG E Q L + ++AGDSHS+AL +G+V+ WGS +++G +G
Sbjct: 488 RRGQLGIGITATREIPVQATGLASISA-LAAGDSHSLALRGNGSVWTWGS--NAYGQLG- 543
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSA- 212
G I + T ++ ++ I +A+G H + L + G + G + GQLG +T R
Sbjct: 544 DGTAIDRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP 603
Query: 213 -SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
+ M +E G H++ G++ +G N++ QLG D V
Sbjct: 604 VQVSGLSAMRAVEAGPAHSVAVHLN--------------GTVWVWGNNDFGQLG--DGTV 647
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
T P + L+ T +A G +HSLAL ++G ++A+G ++ G+LG S
Sbjct: 648 -----TSRAMPVQVSGLT--GVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLG-NGTSGI 699
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
+ P +P L + ++A GN S A+ ++G ++GWG + QLG+G
Sbjct: 700 QSTPAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVP 757
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L SE ++ +G G+LG V++ T P + L D +T+
Sbjct: 758 GLTNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTT-PVQVSGLTD--VTA 814
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+A GN + A+ ++ ++ WG Q+G+G + P+ +
Sbjct: 815 LAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVS 857
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 218/492 (44%), Gaps = 64/492 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R T V L +V+ V H++ L DG V+ WG N
Sbjct: 162 GTVWAWGFNGSGQLGNG-TATDRATPVQVPGLTSVMAVAASEAHSLALRSDGTVWAWGDN 220
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGD-------SHSVALLEDGTVYAWGSFRD 149
G LG + Q + L + G+ +HS+AL DGTV+AWG +
Sbjct: 221 GYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGD--N 278
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
S G +G + TP+++ ++ + +A+GA H + L G + G GQLG T
Sbjct: 279 SAGQLGDGTTTERATPVQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTT 338
Query: 210 RSASRNARRGMSFLEPG---EVPLKRKHIDDVF--TGVYNTFISSKGSILAFGLNNYSQL 264
+ R PG + + DD G ++ + S G++ A+G N Q
Sbjct: 339 TA------RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQF 392
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ + TP + L+ T L +G H++ L S+G ++A+G + G+LG
Sbjct: 393 GDGMPATRT-------TPVQVSELTGG--TALVAGDLHAVVLKSDGTVWAWGDNSSGQLG 443
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----K 380
+ V+ +P + L IT++A G+ S A+ S+G ++ WG QLG G +
Sbjct: 444 -EGVTPVRAKPMQVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATR 500
Query: 381 EDDI--------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
E + L G ++ +G + YG+LG + T +P L
Sbjct: 501 EIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATA-AQVPGL 559
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
D IT++A GN S A+ ++G ++ WG + QLG+G P+++ G +
Sbjct: 560 TD--ITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLS----AMR 613
Query: 481 QVASGGQHSVIL 492
V +G HSV +
Sbjct: 614 AVEAGPAHSVAV 625
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 210/475 (44%), Gaps = 75/475 (15%)
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP 119
KTF L + V G HT+ L DG V+ WG N G LG D Q L
Sbjct: 134 KTFTLTANACPAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGL- 192
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ ++A ++HS+AL DGTV+AWG + +G +G + + TP+++ ++G+ +A+
Sbjct: 193 TSVMAVAASEAHSLALRSDGTVWAWGD--NGYGQLGDGTKAQRTTPVQVLGLAGVTALAA 250
Query: 180 GAD--------HFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVP 229
G + H + L S G + G GQL G T+R+ P +V
Sbjct: 251 GGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERA------------TPVQV- 297
Query: 230 LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L + + G +++ + G++ A+G N+ QLG+ + + T P L +
Sbjct: 298 LGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVI 354
Query: 289 S------DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+ D M HSLAL S+G ++A+G + + G P T TP+ +
Sbjct: 355 AVAAGGGDDSLGMRG---DHSLALKSDGTVWAWGYNLSRQFG---DGMPATRTTPVQVSE 408
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----------------------- 379
T++ G+ + + S+G ++ WG + QLG G
Sbjct: 409 LTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATG 468
Query: 380 -KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ S+G I+A+G + G+LG+ + T P+ + +I+++A G+ S A+
Sbjct: 469 DGHSVAVGSDGGIWAWGDNRRGQLGIGITA---TREIPVQATGLASISALAAGDSHSLAL 525
Query: 439 DSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G ++ WG N Y QLG+G D ++ G L + T L A+G HS+ L
Sbjct: 526 RGNGSVWTWGS-NAYGQLGDGTAIDRATAAQVPG--LTDITAL--AAGNHHSLAL 575
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 220/489 (44%), Gaps = 66/489 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G+LG G + + V +L V+ V G H++ L DG V+ WG N
Sbjct: 15 GTVWASGYNYHGELGNG-TATDSLSPVQVSNLTGVISVAAGYYHSLALKSDGTVWAWGLN 73
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG Q +NL + I+A S AL DGTV++WG +S ++G
Sbjct: 74 TYGNLGDNTTTTRTKPVQVLNL-TGVIAIAADYYQSFALKSDGTVWSWGYNGNS--ALGN 130
Query: 157 KGEGIQKTPLKLESVSG--------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
QK P +++ G +V IA+G H + L S G + + G GQLG T
Sbjct: 131 ASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGT 190
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ S A + ++ + + H + + + G+++++G N Y QLG
Sbjct: 191 LATQSA-AVQAVNLTDAVAISAGAAH---------SLALRANGAVVSWGANTYGQLGNGT 240
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ S P + L++ K LA+G +HSLAL S+G + A+G + YG++G
Sbjct: 241 TTTSAS-------PVGVSGLNNIK--SLAAGGNHSLALKSDGTVTAWGYNAYGQVG-NGA 290
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAI-DSEGVLYGWGMGNGYQLGN--------- 378
+ V P + +L +T+++ G S AI S GV++GWG+ LGN
Sbjct: 291 TANVLSPIAVSTLSG--VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRSTP 348
Query: 379 --------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
G + I + +G ++A+G + YG++G P+ TP+
Sbjct: 349 GTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIG---DGTPLRRLTPVQLSTLT 405
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
I ++A G S A+ + G ++ WG N QLG+G + P ++ N ++ +A
Sbjct: 406 GIIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVP----NLTGIVALA 461
Query: 484 SGGQHSVIL 492
+G HS+ L
Sbjct: 462 AGATHSLAL 470
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 216/472 (45%), Gaps = 70/472 (14%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
P +++ ++ L +VV + G HT+ L +G V++WG N G LG
Sbjct: 139 PAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAV 198
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
Q VNL AV ISAG +HS+AL +G V +WG+ +++G +G +P+ + ++
Sbjct: 199 QAVNL-TDAVAISAGAAHSLALRANGAVVSWGA--NTYGQLGNGTTTTSASPVGVSGLNN 255
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +A+G +H + L S G + G GQ+G A+ N L P V
Sbjct: 256 IKSLAAGGNHSLALKSDGTVTAWGYNAYGQVG----NGATAN------VLSPIAVS-TLS 304
Query: 234 HIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ V GV ++ SS G I +GLN Y LG +++V +S TP I L
Sbjct: 305 GVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN-NTKVNRS------TPGTI--LLTS 355
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A G H++ + +G ++A+G + YG++G P+ TP+ I ++A
Sbjct: 356 GLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIG---DGTPLRRLTPVQLSTLTGIIAVAA 412
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNS 387
G S A+ + G ++ WG N QLG+G + L
Sbjct: 413 GANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTGIVALAAGATHSLALRF 472
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+G +YA+GR+ G+LG + ++ ++ P + L+ + +I+ G+ S AI G + W
Sbjct: 473 DGTVYAWGRNHLGQLGDETCTDRLS-PVAVHYLEK--VVAISAGDNHSLAIHQNGTAFAW 529
Query: 448 GMGNGYQL-----GNGKEDDILE--PMKIEGKQLNNYTVLQVASGGQHSVIL 492
G QL G+G+ ++ P ++G + +A+G H+++L
Sbjct: 530 GSDEHGQLCDSGSGSGRFSPLISQIPGIVKG--------IGIAAGANHTLLL 573
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 204/446 (45%), Gaps = 55/446 (12%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HT+ + +DG V+ G N G LG DS Q NL + ++AG HS+AL
Sbjct: 4 GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNL-TGVISVAAGYYHSLALK 62
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
DGTV+AWG +++G++G + P+++ +++G++ IA+ L S G + +
Sbjct: 63 SDGTVWAWG--LNTYGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTVWSW 120
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G LG + + A+ SF G + + + G ++T + S G++ +
Sbjct: 121 GYNGNSALGNASPATQKLPAQVQQSF---GGILSPLTDVVAIAAGTHHTLALKSNGTVWS 177
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GLN+ QLG Q + +++++ +++G HSLAL + G + ++
Sbjct: 178 WGLNSSGQLGNGTLATQSAA---------VQAVNLTDAVAISAGAAHSLALRANGAVVSW 228
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY- 374
G + YG+LG + P + L + I S+A G S A+ S+G + WG N Y
Sbjct: 229 GANTYGQLG-NGTTTTSASPVGVSGLNN--IKSLAAGGNHSLALKSDGTVTAWGY-NAYG 284
Query: 375 QLGNGKEDDIL-------------------------NSEGKIYAFGRHDYGRLGLKNVSE 409
Q+GNG ++L +S G I+ +G + YG LG +
Sbjct: 285 QVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLG---NNT 341
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V TP L + +A G + + +G ++ WG Q+G+G L P+
Sbjct: 342 KVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPV-- 399
Query: 470 EGKQLNNYT-VLQVASGGQHSVILAK 494
QL+ T ++ VA+G HS+ LA
Sbjct: 400 ---QLSTLTGIIAVAAGANHSLALAA 422
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 189/425 (44%), Gaps = 50/425 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
GV+ G G LG V R T + + V G HT+ + DG V+ WG N
Sbjct: 324 GVIWGWGLNTYGGLGNNTKV-NRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSN 382
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G +G + P ++ + ++AG +HS+AL +GTV+AWG R++HG +G
Sbjct: 383 TYGQIG-DGTPLRRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWG--RNNHGQLGD 439
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
+ P ++ +++GIV +A+GA H + L G + G GQLG T R
Sbjct: 440 GSTTNRSLPTQVPNLTGIVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDR---- 495
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
L P V K + ++ I G+ A+G + + QL ++ S +
Sbjct: 496 --------LSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGR- 546
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
F+P + + K +A+G +H+L L + G +A G + YG+LG ++ +
Sbjct: 547 -----FSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDK-SA 600
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P PI +L + +A G S A+ + G + WG+ + QLG D+ S I
Sbjct: 601 PVPITTLTNAA--RLAAGGNTSAALTTNGTVSTWGLNSSGQLG----DNTTASRTTI--- 651
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
PV T P+++ + + S+ G A+ ++G ++ WG+ +
Sbjct: 652 --------------APVLR-TVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSG 696
Query: 454 QLGNG 458
Q+G+G
Sbjct: 697 QIGDG 701
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 31/353 (8%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G GQ+G G + R T + L ++ V G H++ L +G V+ WG
Sbjct: 372 GDGTVWAWGSNTYGQIGDGTP-LRRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWG 430
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N+ G LG + + Q NL V ++AG +HS+AL DGTVYAWG R+ G +
Sbjct: 431 RNNHGQLGDGSTTNRSLPTQVPNL-TGIVALAAGATHSLALRFDGTVYAWG--RNHLGQL 487
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G + + +P+ + + +V I++G +H + + G G E GQL
Sbjct: 488 GDETCTDRLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQL---------C 538
Query: 215 NARRGMSFLEP--GEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
++ G P ++P K I + + + G+ A G N Y QLG+ + +
Sbjct: 539 DSGSGSGRFSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDK 598
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ P I +L++ LA+G + S AL + G + +G + G+LG N +
Sbjct: 599 SA-------PVPITTLTNAA--RLAAGGNTSAALTTNGTVSTWGLNSSGQLG-DNTTASR 648
Query: 333 TEPTPI-----PSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
T P+ P+++ + + S+ G A+ ++G ++ WG+ + Q+G+G
Sbjct: 649 TTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDG 701
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 225/510 (44%), Gaps = 70/510 (13%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
+ +N + V V S +L ++ G V G +GQLG G + + V+ L V
Sbjct: 95 KVKNLTDAVAVASGDSHSLALRSDG-TVWAWGDNYSGQLGTGSTAVSAEPVQ-VQGLSGV 152
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ V G H+ L DG V+ WG N LG G S +P V + ++AG +
Sbjct: 153 LSVASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSS-VPVQVPGLGGVIAVAAGGNT 211
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
++AL DGTV+AWG R G +G + PL++ ++G+V +++GA H V L S G
Sbjct: 212 TLALRADGTVWAWGDNRS--GQLGDGTVTTRGNPLQVLGLTGVVTLSAGASHCVALRSNG 269
Query: 192 NLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF--- 246
T G GQLG TQRS P +V L DV V +
Sbjct: 270 TAWTWGLNTMGQLGDGTTTQRSV------------PAQVGLT-----DVMAAVAGNYHSL 312
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ S G++ A+G N Y QLG + T P I++ T++A G HSL
Sbjct: 313 AVRSDGAVWAWGDNRYRQLGNGNM-------TSSLLP--IQAGLSGGITLVA-GFKHSLT 362
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L ++G ++++G + +G+LG +P P + + +A G S DS G +
Sbjct: 363 LRADGTVWSWGDNVFGQLG-DGTYQPRMSPVRVATTTLGN-PGVASGQLHSVYRDSAGRV 420
Query: 366 YGWGMGNGYQLGNGKEDD-----------------------ILNSEGKIYAFGRHDYGRL 402
+ WG QLGNG D +L + ++A+G + G +
Sbjct: 421 WSWGDNEDGQLGNGIGADKLTPALTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEV 480
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G + ++P + L IT+I+ G S A+ ++G ++ WG QLGNG D
Sbjct: 481 G-DGTNANTSQPVRVLGLSG--ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVD 537
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+P+++ G V +A+G HS+ L
Sbjct: 538 QNQPVQVAGLS----GVTAIAAGHSHSLAL 563
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 209/473 (44%), Gaps = 65/473 (13%)
Query: 50 LGLGPDVMERK-----TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE 104
LG G D+ + + T A + +V + +G H+V + DG V+ WG N +G LG
Sbjct: 26 LGCGQDLPQARAPVDQTRAALAGRASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNG 85
Query: 105 AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT 164
+S + NL AV +++GDSHS+AL DGTV+AWG + G +G +
Sbjct: 86 LFTNSPTPVKVKNL-TDAVAVASGDSHSLALRSDGTVWAWGD--NYSGQLGTGSTAVSAE 142
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
P++++ +SG++ +ASG H L S G + G QLG +T S+S
Sbjct: 143 PVQVQGLSGVLSVASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSS----------V 192
Query: 225 PGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
P +VP I G + + G++ A+G N QLG D V GN
Sbjct: 193 PVQVPGLGGVIAVAAGGNTTLALRADGTVWAWGDNRSGQLG--DGTVTTRGNP------- 243
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
++ L L++G H +AL S G + +G + G+LG + T +P+
Sbjct: 244 LQVLGLTGVVTLSAGASHCVALRSNGTAWTWGLNTMGQLG-----DGTTTQRSVPAQVGL 298
Query: 345 T-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-----------------------K 380
T + + GN S A+ S+G ++ WG QLGNG K
Sbjct: 299 TDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGLSGGITLVAGFK 358
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L ++G ++++G + +G+LG +P P + + +A G S DS
Sbjct: 359 HSLTLRADGTVWSWGDNVFGQLG-DGTYQPRMSPVRVATTTLGN-PGVASGQLHSVYRDS 416
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT-VLQVASGGQHSVIL 492
G ++ WG QLGNG D L P L T + V +G +H+V+L
Sbjct: 417 AGRVWSWGDNEDGQLGNGIGADKLTPA------LTGLTGAVSVVAGNRHTVVL 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 213/481 (44%), Gaps = 61/481 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G T G GQLG G +R A V L +V+ V G H++ + DG V+ WG N
Sbjct: 269 GTAWTWGLNTMGQLGDGT-TTQRSVPAQV-GLTDVMAAVAGNYHSLAVRSDGAVWAWGDN 326
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
LG S +P L + + AG HS+ L DGTV++WG + G +G
Sbjct: 327 RYRQLG-NGNMTSSLLPIQAGL-SGGITLVAGFKHSLTLRADGTVWSWGD--NVFGQLGD 382
Query: 157 KGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ +P+++ + + G +ASG H V S G + + G E GQLG
Sbjct: 383 GTYQPRMSPVRVATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNGI------- 435
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
G L P L + V + + ++ A+G+N+ ++G+
Sbjct: 436 ---GADKLTPALTGLTGA-VSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDG-------- 483
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
T T ++ L T +++G +HSLAL ++G ++A+G + YG+LG + +P
Sbjct: 484 -TNANTSQPVRVLGLSGITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQ-NQP 541
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------ 383
+ L +T+IA G+ S A+ +G ++ WG Q+G+G +
Sbjct: 542 VQVAGLSG--VTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNWHILPVQAVGLSS 599
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
L S+G ++++G + G+LG ++ + P P+ +L + SIA G
Sbjct: 600 VTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALAS-LNAPGPVSNLTG--VVSIAAG 656
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S A+ S+G + WG Q+G+G + P+ + G V+ V +G HS+
Sbjct: 657 DYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVAGMS----GVVSVIAGDHHSMA 712
Query: 492 L 492
+
Sbjct: 713 M 713
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 157/348 (45%), Gaps = 29/348 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G + GQLG G + K + L V VV G HTV L D V+ WG N
Sbjct: 418 GRVWSWGDNEDGQLGNG--IGADKLTPALTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVN 475
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G +G ++ + + L ISAG HS+AL DGTV+AWG R +G +G
Sbjct: 476 SRGEVGDGTNANTSQPVRVLGL-SGITAISAGAYHSLALRTDGTVWAWGFNR--YGQLGN 532
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
G Q P+++ +SG+ IA+G H + L G + G GQ+G T
Sbjct: 533 GGTVDQNQPVQVAGLSGVTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNN------ 586
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
L V L + + G Y++ + S G++ ++G N QLG
Sbjct: 587 ---WHILPVQAVGLSS--VTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALA----- 636
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P + +L+ +A+G +HSLAL S+G + A+G + G++G +++
Sbjct: 637 --SLNAPGPVSNLT--GVVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTN---RH 689
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
P+ + S+ G+ S A+ S+G + WG QLG+G +D
Sbjct: 690 VPVMVAGMSGVVSVIAGDHHSMAMRSDGTTWAWGANTEGQLGDGTRND 737
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G GQ+G G + V L +V + GG H++ L DG V++WG
Sbjct: 565 GDGTVWAWGYNFDGQIGSGTNNWHILPVQAV-GLSSVTAITAGGYHSLALRSDGTVWSWG 623
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG A S P V+ V I+AGD HS+AL DGTV AWG D G +
Sbjct: 624 YNGSGQLGNGALA-SLNAPGPVSNLTGVVSIAAGDYHSLALRSDGTVRAWGFNFD--GQI 680
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G + P+ + +SG+V + +G H + + S G G +GQLG T+
Sbjct: 681 GDGSLTNRHVPVMVAGMSGVVSVIAGDHHSMAMRSDGTTWAWGANTEGQLGDGTR 735
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQ+G G + R +V + VV V+ G H++ + DG + WG N
Sbjct: 667 GTVRAWGFNFDGQIGDG-SLTNRHVPVMVAGMSGVVSVIAGDHHSMAMRSDGTTWAWGAN 725
Query: 97 DEGALGREAEGDSEFIPQTVNL 118
EG LG DS IP V L
Sbjct: 726 TEGQLGDGTRNDS-IIPVRVEL 746
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 227/499 (45%), Gaps = 86/499 (17%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM---------HTVCLTED 87
G V G +GQLG G R T V L +V+ V GG H++ L D
Sbjct: 321 GTVWAWGNNSSGQLGDG-TTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD 379
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS------AGDSHSVALLEDGTV 141
G V+ WG N L R+ GD +P T P + +++ AGD H+V L DGTV
Sbjct: 380 GTVWAWGYN----LSRQ-FGDG--MPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTV 432
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+AWG +S G +G ++ P+++ ++ I +A+G H V + S G + G +
Sbjct: 433 WAWGD--NSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRR 490
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFG 257
GQLG + E+P++ + + ++ + GS+ +G
Sbjct: 491 GQLG--------------IGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWG 536
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N Y QLG+ + + ++ T + L+D T LA+G HHSLAL ++G ++ +G
Sbjct: 537 SNAYGQLGDG-TAIDRA------TAAQVPGLTD--ITALAAGNHHSLALRNDGTVWVWGS 587
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+D+G+LG V+ + TP+ + ++ G S A+ G ++ WG + QLG
Sbjct: 588 NDFGQLGDGTVT---SRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLG 644
Query: 378 NGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
+G L ++G ++A+G ++ G+LG S +
Sbjct: 645 DGTVTSRAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLG-NGTSGIQST 703
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P +P L + ++A GN S A+ ++G ++GWG + QLG+G P ++ G
Sbjct: 704 PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG-- 759
Query: 474 LNNYTVLQVASGGQHSVIL 492
L N V+ + +G ++V L
Sbjct: 760 LTN--VIALNAGAFYTVAL 776
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 210/459 (45%), Gaps = 58/459 (12%)
Query: 59 RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL 118
R T V +L +V G +H V L DG V+ WG N G LG E P V+
Sbjct: 401 RTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLG-EGVTPVRAKPMQVSG 459
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
++ GD HSVA+ DG ++AWG R G +G+ ++ P++ ++ I +A
Sbjct: 460 LAAITALATGDGHSVAVGSDGGIWAWGDNR--RGQLGIGITATREIPVQATGLASISALA 517
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G H + L G++ T G GQLG T R + PG I +
Sbjct: 518 AGDSHSLALRGNGSVWTWGSNAYGQLGDGTA------IDRATAAQVPG-----LTDITAL 566
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +++ + + G++ +G N++ QLG+ +K TP + LS + +
Sbjct: 567 AAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRK-------TPVQVSGLSAMR--AVE 617
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G HS+A++ G ++ +G +D+G+LG V+ + P+ +T++A G S
Sbjct: 618 AGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVT---SRAMPVQVSGLTGVTAVAVGVYHSL 674
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKE------------------------DDILNSEGKIYA 393
A+ ++G L+ WG N QLGNG L ++G ++
Sbjct: 675 ALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNGHSLALRTDGTVWG 734
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + +G+LG + P + PT +P L + + ++ G + A+ SE ++ WG +
Sbjct: 735 WGANSFGQLG-DGTTTPRSTPTQVPGLTN--VIALNAGAFYTVALRSERSVWEWGSKSAG 791
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G P+++ G L + T L A+G H++ L
Sbjct: 792 QLGDGTVTQKTTPVQVSG--LTDVTAL--AAGNAHALAL 826
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 210/463 (45%), Gaps = 63/463 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G + K V L + + G H+V + DG ++ WG N
Sbjct: 430 GTVWAWGDNSSGQLGEGVTPVRAKPMQ-VSGLAAITALATGDGHSVAVGSDGGIWAWGDN 488
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG E Q L + ++AGDSHS+AL +G+V+ WGS +++G +G
Sbjct: 489 RRGQLGIGITATREIPVQATGLASISA-LAAGDSHSLALRGNGSVWTWGS--NAYGQLG- 544
Query: 157 KGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSA- 212
G I + T ++ ++ I +A+G H + L + G + G + GQLG +T R
Sbjct: 545 DGTAIDRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP 604
Query: 213 -SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
+ M +E G H++ G++ +G N++ QLG D V
Sbjct: 605 VQVSGLSAMRAVEAGPAHSVAVHLN--------------GTVWVWGNNDFGQLG--DGTV 648
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
T P + L+ T +A G +HSLAL ++G ++A+G ++ G+LG S
Sbjct: 649 -----TSRAMPVQVSGLT--GVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLG-NGTSGI 700
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
+ P +P L + ++A GN S A+ ++G ++GWG + QLG+G
Sbjct: 701 QSTPAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVP 758
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L SE ++ +G G+LG V++ T P + L D +T+
Sbjct: 759 GLTNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTT-PVQVSGLTD--VTA 815
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+A GN + A+ ++ ++ WG Q+G+G + P+ +
Sbjct: 816 LAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVS 858
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 218/492 (44%), Gaps = 64/492 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R T V L +V+ V H++ L DG V+ WG N
Sbjct: 163 GTVWAWGFNGSGQLGNG-TATDRATPVQVPGLTSVMAVAASEAHSLALRSDGTVWAWGDN 221
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGD-------SHSVALLEDGTVYAWGSFRD 149
G LG + Q + L + G+ +HS+AL DGTV+AWG +
Sbjct: 222 GYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGD--N 279
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
S G +G + TP+++ ++ + +A+GA H + L G + G GQLG T
Sbjct: 280 SAGQLGDGTTTERATPVQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTT 339
Query: 210 RSASRNARRGMSFLEPG---EVPLKRKHIDDVF--TGVYNTFISSKGSILAFGLNNYSQL 264
+ R PG + + DD G ++ + S G++ A+G N Q
Sbjct: 340 TA------RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQF 393
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ + TP + L+ T L +G H++ L S+G ++A+G + G+LG
Sbjct: 394 GDGMPATRT-------TPVQVSELTGG--TALVAGDLHAVVLKSDGTVWAWGDNSSGQLG 444
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----K 380
+ V+ +P + L IT++A G+ S A+ S+G ++ WG QLG G +
Sbjct: 445 -EGVTPVRAKPMQVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATR 501
Query: 381 EDDI--------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
E + L G ++ +G + YG+LG + T +P L
Sbjct: 502 EIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATA-AQVPGL 560
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
D IT++A GN S A+ ++G ++ WG + QLG+G P+++ G +
Sbjct: 561 TD--ITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLS----AMR 614
Query: 481 QVASGGQHSVIL 492
V +G HSV +
Sbjct: 615 AVEAGPAHSVAV 626
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 210/475 (44%), Gaps = 75/475 (15%)
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP 119
KTF L + V G HT+ L DG V+ WG N G LG D Q L
Sbjct: 135 KTFTLTANACPAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGL- 193
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ ++A ++HS+AL DGTV+AWG + +G +G + + TP+++ ++G+ +A+
Sbjct: 194 TSVMAVAASEAHSLALRSDGTVWAWGD--NGYGQLGDGTKAQRTTPVQVLGLAGVTALAA 251
Query: 180 GAD--------HFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVP 229
G + H + L S G + G GQL G T+R+ P +V
Sbjct: 252 GGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERA------------TPVQV- 298
Query: 230 LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L + + G +++ + G++ A+G N+ QLG+ + + T P L +
Sbjct: 299 LGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVI 355
Query: 289 S------DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+ D M HSLAL S+G ++A+G + + G P T TP+ +
Sbjct: 356 AVAAGGGDDSLGMRG---DHSLALKSDGTVWAWGYNLSRQFG---DGMPATRTTPVQVSE 409
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----------------------- 379
T++ G+ + + S+G ++ WG + QLG G
Sbjct: 410 LTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATG 469
Query: 380 -KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ S+G I+A+G + G+LG+ + T P+ + +I+++A G+ S A+
Sbjct: 470 DGHSVAVGSDGGIWAWGDNRRGQLGIGITA---TREIPVQATGLASISALAAGDSHSLAL 526
Query: 439 DSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G ++ WG N Y QLG+G D ++ G L + T L A+G HS+ L
Sbjct: 527 RGNGSVWTWGS-NAYGQLGDGTAIDRATAAQVPG--LTDITAL--AAGNHHSLAL 576
>gi|452839962|gb|EME41901.1| hypothetical protein DOTSEDRAFT_74077 [Dothistroma septosporum
NZE10]
Length = 600
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 190/425 (44%), Gaps = 61/425 (14%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLD---- 69
P++KV V ++ ++ T V G+G G+L LG + ++ K L +L
Sbjct: 137 PAKKVKVLAKGPVLVEPPTQRLNVYVFGEGTAGELALGTAKNAVDVKRPRLNPNLSAQTV 196
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD--------------------- 108
V ++ GGMH + +T D K+ TWG ND+G LGRE E +
Sbjct: 197 GVTQLAAGGMHAIAITHDNKILTWGVNDQGTLGRETEWEGGLKDMDDNASDSDSDDAEDN 256
Query: 109 ----SEFIPQTVNLPK-------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-L 156
E P V+ + VQ++AGDS S L +DG VY WG+FR + G G +
Sbjct: 257 GLNPKECTPGEVDWSSTELAEGTRFVQVAAGDSSSFVLTDDGRVYGWGTFRSNDGIFGFI 316
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+G + P+ + + + I +GA+H + + ++G + G +Q QLGR R R
Sbjct: 317 EGVKVATRPVLIPGLKNVTDIKAGANHALAMDTKGAVFAWGSGQQNQLGR---RIIERTK 373
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+ ++ E G +K I + TG Y++F I+ G + A+GLNN+ + G D+ Q
Sbjct: 374 EKALTPTEFGLPKGPKKGIVSIETGSYHSFAIAKTGEVWAWGLNNFGETGIMDNAGQD-- 431
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-------- 327
+ P ++ +L+ K + G HHSLA G+ +GR D + G+
Sbjct: 432 DAVIINPKVVSALTGKNIISIKGGGHHSLAATESGECLIWGRIDGSQTGIAEEDIAKLPA 491
Query: 328 ---VSEPVTEPTPIPSLQ-----DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ + P + + Q + + + + I +G + WG YQ G G
Sbjct: 492 DAVIKDEQGRPRILAAPQMVSAIKGEVAHVTTSSDHNIVITKDGKAWSWGFSANYQTGLG 551
Query: 380 KEDDI 384
+DD+
Sbjct: 552 TDDDV 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 166/413 (40%), Gaps = 71/413 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSF------RDSHGSMGLK------------------- 157
Q++AG H++A+ D + WG R++ GLK
Sbjct: 199 TQLAAGGMHAIAITHDNKILTWGVNDQGTLGRETEWEGGLKDMDDNASDSDSDDAEDNGL 258
Query: 158 -------GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC--PEQGQLGRIT 208
GE + + +L + V++A+G +LT G + G G G I
Sbjct: 259 NPKECTPGE-VDWSSTELAEGTRFVQVAAGDSSSFVLTDDGRVYGWGTFRSNDGIFGFIE 317
Query: 209 -QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ A+R L PG K++ D+ G + + +KG++ A+G +QLG
Sbjct: 318 GVKVATR------PVLIPG-----LKNVTDIKAGANHALAMDTKGAVFAWGSGQQNQLGR 366
Query: 267 ADSEVQKSGN---TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
E K T F P K K + +G +HS A+ G+++A+G +++G
Sbjct: 367 RIIERTKEKALTPTEFGLPKGPK----KGIVSIETGSYHSFAIAKTGEVWAWGLNNFGET 422
Query: 324 GLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
G+ + + + P + +L K I SI G S A G WG +G Q G
Sbjct: 423 GIMDNAGQDDAVIINPKVVSALTGKNIISIKGGGHHSLAATESGECLIWGRIDGSQTGIA 482
Query: 380 KED-DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ED L ++ I + + GR + + P + +++ + + + + + I
Sbjct: 483 EEDIAKLPADAVI----KDEQGRPRI------LAAPQMVSAIKGE-VAHVTTSSDHNIVI 531
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+G + WG YQ G G +DD+ I+ + + +GGQ S+I
Sbjct: 532 TKDGKAWSWGFSANYQTGLGTDDDVPVATMIDNTAVREQKLNYATTGGQFSII 584
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 232/534 (43%), Gaps = 109/534 (20%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL---VEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V + G + G+LG P E T ++ V+ L +V+ + GG H++ L +DG V+ W
Sbjct: 211 GTVWSWGYNEDGELGNRP--TEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIW 268
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G G + + + D+ +IP + K V I+AG HS+AL +DGTV+ WG H S
Sbjct: 269 GG---GIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG-----HNS 320
Query: 154 MGLKGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G+ G + + P++++ + +V +A+G H V LT G + G GQLGR
Sbjct: 321 YGVLGSNVGEHSFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGR-ENN 379
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLG- 265
S S N +P K K +D+V G + I G++ ++G NN QLG
Sbjct: 380 SFSLN------------LPYKVKWLDNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGN 427
Query: 266 ---------------------EADSE----VQKSGNTCFF----------------TPHL 284
EA S+ V K G + +P
Sbjct: 428 GTYKSSYIPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLP 487
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD- 343
IK T +A G + L L +G I+ G Y R K V+ T + L +
Sbjct: 488 IKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFR---KFTDSSVSSVTKLIRLDNI 544
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWG---MGNGYQLGNGKEDDI---------------- 384
K + SIA G S A+ ++G ++ WG + N + N E +
Sbjct: 545 KNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFSEKPVKIKGLSGVVKVAAGKY 604
Query: 385 ----LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L +G ++++G + YG+LG E P + L + + +IA G+ S A+
Sbjct: 605 HSLALKKDGTVWSWGYNAYGQLG-NGTRETSFVPVRVKGLNN--VVAIAAGDYHSMALKK 661
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G ++ WG QLG + P+K+E +L+N V+ +A+G HSV L K
Sbjct: 662 DGTVWVWGSNIRGQLGRRNIEFSTVPLKVE--KLDN--VVAIAAGDTHSVALKK 711
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 209/449 (46%), Gaps = 69/449 (15%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G +HT+ + +DG V+ WG N G LG DS IP V K V +SAG HS+AL
Sbjct: 50 GSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDS-CIPVRVKGLKDVVAVSAGTFHSLALK 108
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
+DG+V+ WG H + G + + + TP+K++ + IV IA+G D + + S G++
Sbjct: 109 KDGSVWIWG-----HTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGSDGSV 163
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISS 249
G G+L G+ L+P VP+K K + DV G+Y++ +
Sbjct: 164 WAWGINNHGEL--------------GIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKR 209
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ ++G N +LG +E + P +K LSD +++G HS+ALN +
Sbjct: 210 DGTVWSWGYNEDGELGNRPTE-----DYTVSVPVRVKGLSD--VIAISAGGFHSIALNKD 262
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW- 368
G ++ +G G + KN + P+ + +IA G S A+ +G ++ W
Sbjct: 263 GAVWIWG----GGIIEKN-GKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG 317
Query: 369 ----------------------GMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLK 405
G+ N + G+ + L G I+A+G + +G+LG +
Sbjct: 318 HNSYGVLGSNVGEHSFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRE 377
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
N S + P + L + + +IA G + AI +G ++ WG N QLGNG
Sbjct: 378 NNSFSLNLPYKVKWLDN--VVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYI 435
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P ++G N VL V +G QHS+ + K
Sbjct: 436 PTCVKGL---NKAVL-VEAGSQHSLAVDK 460
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 142/547 (25%), Positives = 231/547 (42%), Gaps = 135/547 (24%)
Query: 37 GVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G + G+LG+G P + K V+ L +VV V G H++ L DG V++W
Sbjct: 161 GSVWAWGINNHGELGIGSLKPSAVPVK----VKGLKDVVAVSAGLYHSLALKRDGTVWSW 216
Query: 94 GCNDEGALG-------------------------------------------------RE 104
G N++G LG +
Sbjct: 217 GYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGIIEKN 276
Query: 105 AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK- 163
+ D+ +IP + K V I+AG HS+AL +DGTV+ WG H S G+ G + +
Sbjct: 277 GKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG-----HNSYGVLGSNVGEH 331
Query: 164 --TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
P++++ + +V +A+G H V LT G + G GQLGR S S N
Sbjct: 332 SFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGR-ENNSFSLN------ 384
Query: 222 FLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
+P K K +D+V G + I G++ ++G NN QLG +
Sbjct: 385 ------LPYKVKWLDNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSS----- 433
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD--YGRLGLKNVSEPVTEP 335
+ P +K L+ K ++ +G HSLA++ +G ++ +G + + K++ P+ P
Sbjct: 434 --YIPTCVKGLN--KAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPL--P 487
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE------------DD 383
I L D IT IA G + +G + WG GN + + D+
Sbjct: 488 IKIGKLND--ITEIAGGLDYILVLRKDGNI--WGCGNDFYFRKFTDSSVSSVTKLIRLDN 543
Query: 384 ILN---------------SEGKIYAFGRHDY-GRLGLKNVSEPVTEPTPIPSLQDKTITS 427
I N ++G ++++G + + N SE +P I L +
Sbjct: 544 IKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFSE---KPVKIKGLSG--VVK 598
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+A G S A+ +G ++ WG QLGNG + P++++G LNN V+ +A+G
Sbjct: 599 VAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKG--LNN--VVAIAAGDY 654
Query: 488 HSVILAK 494
HS+ L K
Sbjct: 655 HSMALKK 661
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 221/483 (45%), Gaps = 74/483 (15%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGG 78
V V++ +L K G V + G + GQ DV T + V++L N+V + G
Sbjct: 95 VAVSAGTFHSLALKKDGSVWI-WGHTNYGQRK--SDVYRDFTTPVKVKELKNIVAIAAGW 151
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
++ + DG V+ WG N+ G LG + S +P V K V +SAG HS+AL D
Sbjct: 152 DFSLAVGSDGSVWAWGINNHGELGIGSLKPSA-VPVKVKGLKDVVAVSAGLYHSLALKRD 210
Query: 139 GTVYAWGSFRDSHGSMGLK--GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
GTV++WG D G +G + + P++++ +S ++ I++G H + L G +
Sbjct: 211 GTVWSWGYNED--GELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIW 268
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV--FTGVYNTFISSK--GS 252
G G I +++ ++ +P++ + ++ V Y I+ K G+
Sbjct: 269 G-------GGIIEKNGK---------IDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGT 312
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G N+Y LG E F P +K L K +A+G+ HS+AL G I
Sbjct: 313 VWVWGHNSYGVLGSNVGEHS-------FLPVQVKGL--KNVVAVAAGRLHSVALTKNGTI 363
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+A+G + +G+LG +N S + P + L + + +IA G + AI +G ++ WG N
Sbjct: 364 WAWGNNAFGQLGRENNSFSLNLPYKVKWLDN--VVAIAAGGSHTLAIKRDGTVWSWGANN 421
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
QLGNG + PT + L + + G+
Sbjct: 422 KGQLGNG---------------------------TYKSSYIPTCVKGLNKAVL--VEAGS 452
Query: 433 CVSFAIDSEGVLYGWG-MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S A+D +G ++ WG + + + N K DIL P+ I+ +LN+ T ++A G + ++
Sbjct: 453 QHSLAVDKDGTVWVWGFIESVWSEKNTK--DILSPLPIKIGKLNDIT--EIAGGLDYILV 508
Query: 492 LAK 494
L K
Sbjct: 509 LRK 511
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 179/426 (42%), Gaps = 108/426 (25%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G G LG +V E + V+ L NVV V G +H+V LT++G ++ WG
Sbjct: 311 GTVWVWGHNSYGVLG--SNVGEHSFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGN 368
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW----------G 145
N G LGRE S +P V V I+AG SH++A+ DGTV++W G
Sbjct: 369 NAFGQLGRENNSFSLNLPYKVKWLDNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNG 428
Query: 146 SFRDSHGSMGLKG--------EGIQKT-------------------------------PL 166
+++ S+ +KG G Q + P+
Sbjct: 429 TYKSSYIPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPI 488
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-----------RN 215
K+ ++ I +IA G D+ ++L GN+ GC + T S S +N
Sbjct: 489 KIGKLNDITEIAGGLDYILVLRKDGNIW--GCGNDFYFRKFTDSSVSSVTKLIRLDNIKN 546
Query: 216 ARRGMS---------------------------FLEPGEVPLKRKHIDDVF---TGVYNT 245
R + +L E P+K K + V G Y++
Sbjct: 547 VRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFSEKPVKIKGLSGVVKVAAGKYHS 606
Query: 246 FISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
K G++ ++G N Y QLG E F P +K L++ +A+G +HS+
Sbjct: 607 LALKKDGTVWSWGYNAYGQLGNGTRETS-------FVPVRVKGLNN--VVAIAAGDYHSM 657
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +G ++ +G + G+LG +N+ E T P + L + + +IA G+ S A+ +G
Sbjct: 658 ALKKDGTVWVWGSNIRGQLGRRNI-EFSTVPLKVEKLDN--VVAIAAGDTHSVALKKDGT 714
Query: 365 LYGWGM 370
++ WG+
Sbjct: 715 VWVWGI 720
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 185/402 (46%), Gaps = 62/402 (15%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSGIVKI 177
K + AG H++A+ +DGTV+AWG + G G G K P++++ + +V +
Sbjct: 43 KVISSGAGSLHTLAIKDDGTVWAWG-----YNGFGQLGNGTYKDSCIPVRVKGLKDVVAV 97
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
++G H + L G++ G GQ R + F P +V + K+I
Sbjct: 98 SAGTFHSLALKKDGSVWIWGHTNYGQ----------RKSDVYRDFTTPVKVK-ELKNIVA 146
Query: 238 VFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G ++ + S GS+ A+G+NN+ +LG + P +K L D +
Sbjct: 147 IAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSA-------VPVKVKGLKD--VVAV 197
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSIACGNCV 355
++G +HSLAL +G ++++G ++ G LG + + V+ P + L D + +I+ G
Sbjct: 198 SAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISAGGFH 255
Query: 356 SFAIDSEGVLYGWGMG---------NGY------------QLGNGKEDDI-LNSEGKIYA 393
S A++ +G ++ WG G N Y + G I L +G ++
Sbjct: 256 SIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWV 315
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + YG LG NV E P + L K + ++A G S A+ G ++ WG
Sbjct: 316 WGHNSYGVLG-SNVGEHSFLPVQVKGL--KNVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 454 QLGNGKEDDILE-PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QLG L P K+ K L+N V+ +A+GG H++ + +
Sbjct: 373 QLGRENNSFSLNLPYKV--KWLDN--VVAIAAGGSHTLAIKR 410
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G GQLG +E T L VE LDNVV + G H+V L +DG V+ WG
Sbjct: 663 GTVWVWGSNIRGQLGRRN--IEFSTVPLKVEKLDNVVAIAAGDTHSVALKKDGTVWVWGI 720
Query: 96 NDEGALGREAEGDSEFIPQTVNL 118
+ L +E S IP +
Sbjct: 721 ECDRDLSKEILSSSS-IPVQIKF 742
>gi|291222248|ref|XP_002731129.1| PREDICTED: regulator of chromosome condensation 1-like
[Saccoglossus kowalevskii]
Length = 161
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 109/150 (72%), Gaps = 5/150 (3%)
Query: 4 LLKKVLRKQAE-NPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTF 62
+ ++VL + E P++K VT P+ C T G VVLT G GD GQLGLG +VMERK
Sbjct: 6 IKREVLNETIETQPAKKSKVTVSH-PS-HCTTPG-VVLTLGGGDVGQLGLGDNVMERKKP 62
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKK 121
ALV+ + V+++ GGMHTVCLTE GK+YT+GCNDEGALGR+ +E SE++P V+ +
Sbjct: 63 ALVDIPEKTVQIIAGGMHTVCLTEKGKIYTFGCNDEGALGRDTSEEGSEYVPGVVDFHFR 122
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
VQISAGDSH+ AL +DG V+AWG+FR+SH
Sbjct: 123 VVQISAGDSHTAALTDDGKVFAWGTFRESH 152
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H T G V T G D G LG P V++P+K VQI AG H+V L E G
Sbjct: 29 HPSHCTTPGVVLTLGGGDVGQLGLGDNVMERKKPALVDIPEKTVQIIAGGMHTVCLTEKG 88
Query: 140 TVYAWGSFRDSHGSMG--LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
+Y +G + G++G EG + P ++ +V+I++G H LT G + G
Sbjct: 89 KIYTFGC--NDEGALGRDTSEEGSEYVPGVVDFHFRVVQISAGDSHTAALTDDGKVFAWG 146
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + ++ G +L G + QLG D+ +++ P L+ + +K ++A G H
Sbjct: 29 HPSHCTTPGVVLTLGGGDVGQLGLGDNVMERK------KPALV-DIPEKTVQIIAGGMH- 80
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++ L +GKIY FG +D G LG ++ SE +E P + I+ G+ + A+ +
Sbjct: 81 TVCLTEKGKIYTFGCNDEGALG-RDTSEEGSEYVPGVVDFHFRVVQISAGDSHTAALTDD 139
Query: 363 GVLYGWG 369
G ++ WG
Sbjct: 140 GKVFAWG 146
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 28/160 (17%)
Query: 159 EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
E I+ P K V+ H T+ G +LT G + GQLG
Sbjct: 13 ETIETQPAKKSKVT--------VSHPSHCTTPGVVLTLGGGDVGQLGL---------GDN 55
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
M +P V + K + + G++ ++ KG I FG N+ LG SE
Sbjct: 56 VMERKKPALVDIPEKTVQIIAGGMHTVCLTEKGKIYTFGCNDEGALGRDTSEEGSE---- 111
Query: 279 FFTPHLIKSLSDKKFTM--LASGQHHSLALNSEGKIYAFG 316
+ P ++ D F + +++G H+ AL +GK++A+G
Sbjct: 112 -YVPGVV----DFHFRVVQISAGDSHTAALTDDGKVFAWG 146
>gi|301111610|ref|XP_002904884.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262095214|gb|EEY53266.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 527
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 179/387 (46%), Gaps = 55/387 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVE---------DLDNVVEVVVGGMHTVCLTED 87
G +LT G GD GQLG G +E+ +VE L+ +V V GG+H+ +T
Sbjct: 107 GQMLTFGSGDCGQLGHG---VEKDKDLMVEFPLVVRPLVKLE-IVRVACGGLHSAAITSA 162
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLEDGTVYA 143
G+V+TWGC+D+GALGR + E IP V AVQ+ GD H+ + G VY
Sbjct: 163 GEVFTWGCDDDGALGRVGD---ENIPTKVTGFGPQQATAVQVVGGDCHTAVVTLAGKVYT 219
Query: 144 WGSFRDSHGSMGLKGEGI-------QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
WG +RD G Q P ++++ I + G+ + T+ G + +
Sbjct: 220 WGCYRDKEGKQWCDAPSAKDAFKKKQTEPFLIKALDNIADVRCGSSFNLARTNDGRVYSW 279
Query: 197 GCPEQGQLGRITQ---RSASRNARRGMSF---LEPGEVPLKRKH---IDDVFTGVYNTF- 246
G E GQLGR + + + M + L+P V L + + G Y++
Sbjct: 280 GLGEMGQLGRTVDDQMKDFKGDYKVDMVYNDHLQPKPVTLGNDPLPVVKAIGCGSYHSLF 339
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+SS G + GLNNY QLG ++E C L++ LS K + G HHS+
Sbjct: 340 ALSSNGYLYTCGLNNYGQLGIGNTE------NC-TELQLVEDLSSKNVAYVDGGSHHSVV 392
Query: 306 LNSEGKIYAFGRHDYGRLGL---------KNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
L +G +Y FGR D G+LG+ K+ + VT P P + + I+ G+ +
Sbjct: 393 LTIDGDVYTFGRADSGQLGMLETCSTGDFKDRPQKVTIPKPKDG-GSRQVCMISSGSNHT 451
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD 383
A+ ++ WG G+ LGNG + D
Sbjct: 452 LALTESNAIFSWGYGDMLALGNGVDRD 478
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 190/454 (41%), Gaps = 84/454 (18%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFI---PQTVN--LPKKAVQISAGDSHSVALLEDGTVY 142
G++ T+G D G LG E D + + P V + + V+++ G HS A+ G V+
Sbjct: 107 GQMLTFGSGDCGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEVF 166
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESV----SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG D G++G G+ + P K+ + V++ G H ++T G + T GC
Sbjct: 167 TWGC--DDDGALGRVGD--ENIPTKVTGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGC 222
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID---DVFTGV-YNTFISSKGSIL 254
+ + ++++A F + P K +D DV G +N ++ G +
Sbjct: 223 YRDKEGKQWCDAPSAKDA-----FKKKQTEPFLIKALDNIADVRCGSSFNLARTNDGRVY 277
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTM----------LASGQHHS 303
++GL QLG + K + + L K T+ + G +HS
Sbjct: 278 SWGLGEMGQLGRTVDDQMKDFKGDYKVDMVYNDHLQPKPVTLGNDPLPVVKAIGCGSYHS 337
Query: 304 L-ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
L AL+S G +Y G ++YG+LG+ N +E TE + L K +
Sbjct: 338 LFALSSNGYLYTCGLNNYGQLGIGN-TENCTELQLVEDLSSKNVA--------------- 381
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL---------KNVSEPVTE 413
Y G +L +G +Y FGR D G+LG+ K+ + VT
Sbjct: 382 -----------YVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCSTGDFKDRPQKVTI 430
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P P + + I+ G+ + A+ ++ WG G+ LGNG + D +P +++ +
Sbjct: 431 PKPKDG-GSRQVCMISSGSNHTLALTESNAIFSWGYGDMLALGNGVDRDENKPYQVDWSK 489
Query: 474 LNN-------------YTVLQVASGGQHSVILAK 494
N LQV +GGQHS +LA+
Sbjct: 490 ATNGKDKKGKKMVFGKAEFLQVEAGGQHSAVLAR 523
>gi|389639524|ref|XP_003717395.1| RCC1 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351643214|gb|EHA51076.1| RCC1 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 919
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 181/408 (44%), Gaps = 76/408 (18%)
Query: 39 VLTCGQGDTGQLGLGP---------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
V G G G+LG GP + + L L VV+V GGMH LT GK
Sbjct: 38 VYAFGTGVAGELGFGPGPPLSSDPESHTQLRAPLLNPALSGVVQVSAGGMHCAALTAAGK 97
Query: 90 VYTWGCNDEGALGREA-----EGDS--------EFIPQTVNLP--------KKAVQISAG 128
+ TWG ND G LGR+ +GD E P V+ VQ+ A
Sbjct: 98 ILTWGANDTGNLGRDTAWEPEDGDDDGAVVNPLESTPMEVDEEWFGGAGKRPDFVQVVAI 157
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGL------------KGEGIQKTPLKLESVSGIVK 176
D+ + AL +DG V+ WGSFRD G +G + IQ P+ + + G VK
Sbjct: 158 DNATFALAKDGKVWGWGSFRDEKGLLGFIKANLDRKPNPTDADKIQTKPIIVPGLPGNVK 217
Query: 177 -IASGADHFVMLTSRGNLLTAG----CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+A +H + LT + G C E G+ R T RSASR + L P V L
Sbjct: 218 QLAGNTNHMLALTHSSQIWAWGGSSTCGELGRRIRST-RSASR-----YNSLVPTRVALP 271
Query: 232 R---KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG----EADSEVQKSGNTCFFTPH 283
R + + V+ G +++F I GS+ A+G N++ Q G A V+ + C P
Sbjct: 272 RSAAREVRAVYAGPHHSFAIDGDGSVFAWGANHFGQTGVVVPRAGGGVEAA-QDCITAPT 330
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------- 334
L L + +A+G HHS+A ++G ++A+GR D G++GL P E
Sbjct: 331 LAPLLGRGRVVHIAAGTHHSVACAADGGVWAWGRCDEGQVGLDLSRFPAGELLVDRRGRR 390
Query: 335 -----PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
P+ +P + T +A G SFA+ G +Y WG GY+LG
Sbjct: 391 VALLVPSIVPLGVGENATRVAAGVDCSFAVTGSGRVYAWGYAEGYRLG 438
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 110/321 (34%), Gaps = 84/321 (26%)
Query: 253 ILAFGLNNYSQLGEADSEVQKS---GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ AFG +LG S +T P L +LS +++G H AL +
Sbjct: 38 VYAFGTGVAGELGFGPGPPLSSDPESHTQLRAPLLNPALS--GVVQVSAGGMHCAALTAA 95
Query: 310 GKIYAFGRHDYGRLGLKNVSEP--------VTEP---TPIPSLQD--------KTITSIA 350
GKI +G +D G LG EP V P TP+ ++ +
Sbjct: 96 GKILTWGANDTGNLGRDTAWEPEDGDDDGAVVNPLESTPMEVDEEWFGGAGKRPDFVQVV 155
Query: 351 CGNCVSFAIDSEGVLYGWGM--------------------------------------GN 372
+ +FA+ +G ++GWG GN
Sbjct: 156 AIDNATFALAKDGKVWGWGSFRDEKGLLGFIKANLDRKPNPTDADKIQTKPIIVPGLPGN 215
Query: 373 GYQL-GNGKEDDILNSEGKIYAFG-RHDYGRLGLK--------NVSEPVTEPTPIPSLQD 422
QL GN L +I+A+G G LG + + V +P
Sbjct: 216 VKQLAGNTNHMLALTHSSQIWAWGGSSTCGELGRRIRSTRSASRYNSLVPTRVALPRSAA 275
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----------NGKEDDILEPMKIEGK 472
+ + ++ G SFAID +G ++ WG + Q G +D I P
Sbjct: 276 REVRAVYAGPHHSFAIDGDGSVFAWGANHFGQTGVVVPRAGGGVEAAQDCITAPTL--AP 333
Query: 473 QLNNYTVLQVASGGQHSVILA 493
L V+ +A+G HSV A
Sbjct: 334 LLGRGRVVHIAAGTHHSVACA 354
>gi|440463893|gb|ELQ33414.1| RCC1 domain-containing protein [Magnaporthe oryzae Y34]
gi|440489822|gb|ELQ69437.1| RCC1 domain-containing protein [Magnaporthe oryzae P131]
Length = 919
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 181/408 (44%), Gaps = 76/408 (18%)
Query: 39 VLTCGQGDTGQLGLGP---------DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
V G G G+LG GP + + L L VV+V GGMH LT GK
Sbjct: 38 VYAFGTGVAGELGFGPGPPLSSDPESHTQLRAPLLNPALSGVVQVSAGGMHCAALTAAGK 97
Query: 90 VYTWGCNDEGALGREA-----EGDS--------EFIPQTVNLP--------KKAVQISAG 128
+ TWG ND G LGR+ +GD E P V+ VQ+ A
Sbjct: 98 ILTWGANDTGNLGRDTAWEPEDGDDDGAVVNPLESTPMEVDEEWFGGAGKRPDFVQVVAI 157
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGL------------KGEGIQKTPLKLESVSGIVK 176
D+ + AL +DG V+ WGSFRD G +G + IQ P+ + + G VK
Sbjct: 158 DNATFALAKDGKVWGWGSFRDEKGLLGFIKANLDRKPNPTDADKIQTKPIIVPGLPGNVK 217
Query: 177 -IASGADHFVMLTSRGNLLTAG----CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+A +H + LT + G C E G+ R T RSASR + L P V L
Sbjct: 218 QLAGNTNHMLALTHSSQIWAWGGSSTCGELGRRIRST-RSASR-----YNSLVPTRVALP 271
Query: 232 R---KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG----EADSEVQKSGNTCFFTPH 283
R + + V+ G +++F I GS+ A+G N++ Q G A V+ + C P
Sbjct: 272 RSAAREVRAVYAGPHHSFAIDGDGSVFAWGANHFGQTGVVVPRAGGGVEAA-QDCITAPT 330
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------- 334
L L + +A+G HHS+A ++G ++A+GR D G++GL P E
Sbjct: 331 LAPLLGRGRVVHIAAGTHHSVACAADGGVWAWGRCDEGQVGLDLSRFPAGELLVDRRGRR 390
Query: 335 -----PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
P+ +P + T +A G SFA+ G +Y WG GY+LG
Sbjct: 391 VALLVPSIVPLGVGENATRVAAGVDCSFAVTGSGRVYAWGYAEGYRLG 438
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 110/321 (34%), Gaps = 84/321 (26%)
Query: 253 ILAFGLNNYSQLGEADSEVQKS---GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ AFG +LG S +T P L +LS +++G H AL +
Sbjct: 38 VYAFGTGVAGELGFGPGPPLSSDPESHTQLRAPLLNPALS--GVVQVSAGGMHCAALTAA 95
Query: 310 GKIYAFGRHDYGRLGLKNVSEP--------VTEP---TPIPSLQD--------KTITSIA 350
GKI +G +D G LG EP V P TP+ ++ +
Sbjct: 96 GKILTWGANDTGNLGRDTAWEPEDGDDDGAVVNPLESTPMEVDEEWFGGAGKRPDFVQVV 155
Query: 351 CGNCVSFAIDSEGVLYGWGM--------------------------------------GN 372
+ +FA+ +G ++GWG GN
Sbjct: 156 AIDNATFALAKDGKVWGWGSFRDEKGLLGFIKANLDRKPNPTDADKIQTKPIIVPGLPGN 215
Query: 373 GYQL-GNGKEDDILNSEGKIYAFG-RHDYGRLGLK--------NVSEPVTEPTPIPSLQD 422
QL GN L +I+A+G G LG + + V +P
Sbjct: 216 VKQLAGNTNHMLALTHSSQIWAWGGSSTCGELGRRIRSTRSASRYNSLVPTRVALPRSAA 275
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----------NGKEDDILEPMKIEGK 472
+ + ++ G SFAID +G ++ WG + Q G +D I P
Sbjct: 276 REVRAVYAGPHHSFAIDGDGSVFAWGANHFGQTGVVVPRAGGGVEAAQDCITAPTL--AP 333
Query: 473 QLNNYTVLQVASGGQHSVILA 493
L V+ +A+G HSV A
Sbjct: 334 LLGRGRVVHIAAGTHHSVACA 354
>gi|115396488|ref|XP_001213883.1| predicted protein [Aspergillus terreus NIH2624]
gi|114193452|gb|EAU35152.1| predicted protein [Aspergillus terreus NIH2624]
Length = 759
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 170/363 (46%), Gaps = 59/363 (16%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN------------- 117
VV + +GG+H+ LT D K+ TWG NDEG LGR+ + D + +T N
Sbjct: 367 VVHLTIGGVHSAALTHDNKILTWGVNDEGTLGRDTKEDPIEVDETPNGADQSDSDSDDDE 426
Query: 118 -----------------LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK- 157
PK V Q++A DS + AL DG VY WG+FR + G +G
Sbjct: 427 VTLNMKEATPAAVDPAHFPKGTVFTQLTATDSATFALTRDGLVYGWGTFRGTSGVIGWSP 486
Query: 158 GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
Q+TP + + + K+ASGA H + LT+ G + + GC EQ QLGR R ASR
Sbjct: 487 TTKFQRTPALIPGLKDVTKLASGAQHVLALTAHGTVYSWGCDEQRQLGR---RRASRA-- 541
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ L PGE L +I DV G Y++F + G++ +G NN+ Q G A +
Sbjct: 542 QDADPLLPGECALP-PNIVDVDAGSYHSFAVRKSGAVYGWGSNNFGQTGIAANAGDSDAV 600
Query: 277 TCFFTPHLIKSLSDKK-FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---- 331
F P + SL + + + G+ HS+ + + G+ +GR D LG+ P
Sbjct: 601 VLF--PTKVASLREHRPIKSITGGKDHSVVV-AGGRCLVWGRIDNKALGVGVEDMPAASV 657
Query: 332 ----------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+T PTP+ ++ + + + G +FAI +G Y WG Q G G+
Sbjct: 658 VRDSYGKPRILTAPTPVTGIEGEVVF-VEAGPDHTFAITDKGAAYSWGFNTQCQAGQGRI 716
Query: 382 DDI 384
D++
Sbjct: 717 DEV 719
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 169/425 (39%), Gaps = 80/425 (18%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPL-------KLESVS-GIVKIASGADHFVMLTSRGN 192
VY +G+ + +G +GL G+ +K+ L KL +VS G+V + G H LT
Sbjct: 329 VYVFGT--NCYGELGL-GDATKKSELPGPVLNPKLAAVSVGVVHLTIGGVHSAALTHDNK 385
Query: 193 LLTAGCPEQGQLGRITQR------SASRNARRGMSFLEPGEVPLKRKHIDDVFTG----- 241
+LT G ++G LGR T+ A + S + EV L K
Sbjct: 386 ILTWGVNDEGTLGRDTKEDPIEVDETPNGADQSDSDSDDDEVTLNMKEATPAAVDPAHFP 445
Query: 242 ---VYNTFISSKGSILAFGLNN----YSQLGEADSEVQKSGNTCF-FTPHLIKSLSDKKF 293
V+ ++ + A + + + S T F TP LI L D
Sbjct: 446 KGTVFTQLTATDSATFALTRDGLVYGWGTFRGTSGVIGWSPTTKFQRTPALIPGLKD--V 503
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP--SLQDKTITSIAC 351
T LASG H LAL + G +Y++G + +LG + S +P I +
Sbjct: 504 TKLASGAQHVLALTAHGTVYSWGCDEQRQLGRRRASRAQDADPLLPGECALPPNIVDVDA 563
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLG-------------------------------NGK 380
G+ SFA+ G +YGWG N Q G GK
Sbjct: 564 GSYHSFAVRKSGAVYGWGSNNFGQTGIAANAGDSDAVVLFPTKVASLREHRPIKSITGGK 623
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDKTIT 426
+ ++ + G+ +GR D LG+ P +T PTP+ ++ + +
Sbjct: 624 DHSVVVAGGRCLVWGRIDNKALGVGVEDMPAASVVRDSYGKPRILTAPTPVTGIEGEVVF 683
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
+ G +FAI +G Y WG Q G G+ D++ P ++ K +N ++ A+GG
Sbjct: 684 -VEAGPDHTFAITDKGAAYSWGFNTQCQAGQGRIDEVERPTLLQNKHVNGKKLVCAAAGG 742
Query: 487 QHSVI 491
Q S+I
Sbjct: 743 QFSII 747
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 129/335 (38%), Gaps = 70/335 (20%)
Query: 224 EPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
EP + P +RK DV V N + + + FG N Y +LG D+ + P
Sbjct: 301 EPAQ-PAQRKRQKDVPAFVPNEPPTRRLDVYVFGTNCYGELGLGDATKKSELPGPVLNPK 359
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV-TEPTP----- 337
L + L G HS AL + KI +G +D G LG +P+ + TP
Sbjct: 360 L--AAVSVGVVHLTIGGVHSAALTHDNKILTWGVNDEGTLGRDTKEDPIEVDETPNGADQ 417
Query: 338 -----------------IPSLQDKT-------ITSIACGNCVSFAIDSEGVLYGWGMGNG 373
P+ D T + + +FA+ +G++YGWG G
Sbjct: 418 SDSDSDDDEVTLNMKEATPAAVDPAHFPKGTVFTQLTATDSATFALTRDGLVYGWGTFRG 477
Query: 374 --------------------------YQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKN 406
+L +G + + L + G +Y++G + +LG +
Sbjct: 478 TSGVIGWSPTTKFQRTPALIPGLKDVTKLASGAQHVLALTAHGTVYSWGCDEQRQLGRRR 537
Query: 407 VSEPVTEPTPIP--SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKED 461
S +P I + G+ SFA+ G +YGWG N Q G N +
Sbjct: 538 ASRAQDADPLLPGECALPPNIVDVDAGSYHSFAVRKSGAVYGWGSNNFGQTGIAANAGDS 597
Query: 462 D--ILEPMKIEGKQLNNYTVLQVASGGQ-HSVILA 493
D +L P K+ L + ++ +GG+ HSV++A
Sbjct: 598 DAVVLFPTKV--ASLREHRPIKSITGGKDHSVVVA 630
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 179/382 (46%), Gaps = 31/382 (8%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-- 69
+ P ++V + S G +V + G+G+ GQLG G D +R T + LD
Sbjct: 12 EVSGPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRPTPTQLSTLDGL 70
Query: 70 NVVEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS 126
+++ + G HT +E +VY+WG D G LG D F PQ + K QI+
Sbjct: 71 DIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDL-FTPQPIKALHSLKIRQIA 129
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF 184
GDSH +A+ DG V +WG R+ +G +GL P K+++ G I +A+GA+H
Sbjct: 130 CGDSHCLAVTMDGEVQSWG--RNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHT 187
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGV 242
+T G L G G LG RN R L P +V L K I
Sbjct: 188 AAVTEDGELYGWGWGRYGNLGL-----GDRNDR-----LVPEKVSLVNGDKMIMVACGWR 237
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +SS G + +G + Y QLG D E TPH +++L D +M++ G H
Sbjct: 238 HTISVSSSGGLYTYGWSKYGQLGHGDFEDH-------LTPHKVEALRDSYISMISGGWRH 290
Query: 303 SLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
++AL S+G +Y +G + +G++G+ N+ P Q ++ I+CG + AI
Sbjct: 291 TMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITE 350
Query: 362 EGVLYGWGMGNGYQLGNGKEDD 383
++ WG G QLG+G+ D
Sbjct: 351 RQNVFSWGRGTNGQLGHGESMD 372
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 163/347 (46%), Gaps = 42/347 (12%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ I++GA H V L S + + G E GQLG + R +S L+ ++
Sbjct: 20 VILISAGASHSVALLSGNIVCSWGRGEDGQLGH--GDAEDRPTPTQLSTLDGLDIISITC 77
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
D ++ S+ + ++G ++ +LG +S + FTP IK+L K
Sbjct: 78 GADHT-----TSYSESRMEVYSWGWGDFGRLGHGNS-------SDLFTPQPIKALHSLKI 125
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A G H LA+ +G++ ++GR+ G+LGL + + P I + Q +I +A G
Sbjct: 126 RQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVSIKMVAAGA 184
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL--------------------------NS 387
+ A+ +G LYGWG G LG G +D L +S
Sbjct: 185 EHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSS 244
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
G +Y +G YG+LG + + +T P + +L+D I+ I+ G + A+ S+G LYGW
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLT-PHKVEALRDSYISMISGGWRHTMALTSDGNLYGW 303
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G Q+G G D P++++ ++++Q++ G +H++ + +
Sbjct: 304 GWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITE 350
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 33/206 (16%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
++ ++++G HS+AL S + ++GR + G+LG + + T PT + +L I SI
Sbjct: 18 RQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT-PTQLSTLDGLDIISIT 76
Query: 351 CG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
CG + S++ S ++Y++G D+GRLG N S
Sbjct: 77 CGADHTTSYS---------------------------ESRMEVYSWGWGDFGRLGHGNSS 109
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ T P PI +L I IACG+ A+ +G + WG QLG G +D L P K
Sbjct: 110 DLFT-PQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQK 168
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAK 494
I+ Q ++ VA+G +H+ + +
Sbjct: 169 IQAFQ--GVSIKMVAAGAEHTAAVTE 192
>gi|424513698|emb|CCO66320.1| predicted protein [Bathycoccus prasinos]
Length = 552
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 185/405 (45%), Gaps = 61/405 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-----------------DNVVEVVV 76
+GGG+ + GD+GQ G G D T L+++L V+++
Sbjct: 99 SGGGLWIFGSNGDSGQFGFGSDA---STGELIDELLRPRVLQKGSILGSPANTKVIKIAC 155
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGR-------EAEGDSEFIPQTVNLPK--KAVQISA 127
GG T + E G+V +WG ND GALGR E E D ++P VNL + KAV + A
Sbjct: 156 GGQQTFAILETGRVLSWGANDSGALGRPTSPPENEDEDDESWLPGYVNLKQNTKAVSVCA 215
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSM-GLKGEGIQKTPLKLESVSGIVK------IASG 180
GD+H++ + DGTVY WG +R +G GL + T V + K I SG
Sbjct: 216 GDTHALVVASDGTVYGWGQWRHQNGQWRGLNKLKVSDTQTFYNPVEILNKKYRAKCIQSG 275
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRI------------TQRSASRNARRGMS-FLEPGE 227
+H +LT G + T GC E+G+LGRI Q++ N ++ L PG
Sbjct: 276 ENHACILTENGEVYTMGCSEKGRLGRIEKTGVGAAYADDNQKADRENNESYVNDLLTPGR 335
Query: 228 VPLKRK---HIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
V + + + + TG ++ I G + + GL+++ Q G D V +S + P
Sbjct: 336 VLINNRKDLKVKAIATGELHGHLILENGDVYSIGLSSFGQGGFFDDGVIESEQVAWL-PR 394
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP---- 339
I SLS K A G HSL L GK+YA G+ GRLG + +P P P
Sbjct: 395 KIPSLSGKGIIAGAGGGFHSLFLAKTGKMYAVGKRHDGRLGALEERQCNDDPHPNPLEIS 454
Query: 340 --SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
++ + G+ S AI + G +Y WG G LG G ++
Sbjct: 455 SSFFGRDSVKMVYAGSNSSGAITNSGEIYTWGSNLG-ALGQGPDN 498
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 186/376 (49%), Gaps = 31/376 (8%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NV 71
++P Q V + S G V+ + G+G+ GQLG G D +R ++ D +
Sbjct: 9 DSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHG-DAEDRLVPTVLSGFDAPAI 67
Query: 72 VEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
V+ G HT +ED +VY+WG D G LG D F PQ V + K QI+ G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV-FTPQPVKALQGLKIKQIACG 126
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVM 186
DSH +A+ G V +WG R+ +G +GL P K+++ + IA+GA+H
Sbjct: 127 DSHCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT 245
+T G+L G G LG RN R L P +V ++ + + V G +T
Sbjct: 185 VTEDGDLYGWGWGRYGNLGL-----GDRNDR-----LLPEKVSSVEGEKMVLVACGWRHT 234
Query: 246 F-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+S G++ +G + Y QLG D E PH +++L D + ++ G H++
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHGDFEDH-------LVPHKVEALKDSTISQISGGWRHTM 287
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL SEGK+Y +G + +G++G+ N ++ + P + +D+ I+ +ACG + A+ +
Sbjct: 288 ALTSEGKLYGWGWNKFGQVGVGN-NDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKN 346
Query: 365 LYGWGMGNGYQLGNGK 380
++ WG G QLGNG+
Sbjct: 347 VFSWGRGTSGQLGNGE 362
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 159/351 (45%), Gaps = 48/351 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+V +++GA H V L + L + G E GQLG R + L + P
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAPA--- 66
Query: 234 HIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I V G +T S+ + ++G ++ +LG +S + FTP +K+L
Sbjct: 67 -ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS-------SDVFTPQPVKALQGL 118
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K +A G H LA+ G++ ++GR+ G+LGL + + P I + + + IA
Sbjct: 119 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFESVCVKMIAA 177
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE----------------------- 388
G + A+ +G LYGWG G LG G +D L E
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237
Query: 389 ---GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
G +Y +G YG+LG + + + P + +L+D TI+ I+ G + A+ SEG LY
Sbjct: 238 SDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSEGKLY 296
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
GWG Q+G G DD P ++ + + + QVA G +H++ L++ K
Sbjct: 297 GWGWNKFGQVGVGNNDDHSSPGQVSFPE--DQKISQVACGWRHTLALSEKK 345
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 46/380 (12%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
P+ V +SAG SHSVALL + +WG D G + + T L I +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVI 71
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDD 237
GADH + + L G GR+ ++S P V L+ I
Sbjct: 72 CGADHTTAYSE--DELQVYSWGWGDFGRLGHGNSS-------DVFTPQPVKALQGLKIKQ 122
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G + ++ G + ++G N QLG +E P I++ M+
Sbjct: 123 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDS-------LLPQKIQAFESVCVKMI 175
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A+G H+ A+ +G +Y +G YG LGL + ++ + P + S++ + + +ACG +
Sbjct: 176 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHT 234
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGK 390
+ G LY +G QLG+G +D L SEGK
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGK 294
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+Y +G + +G++G+ N ++ + P + +D+ I+ +ACG + A+ + ++ WG G
Sbjct: 295 LYGWGWNKFGQVGVGN-NDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRG 353
Query: 451 NGYQLGNGKEDDILEPMKIE 470
QLGNG+ D P+ I+
Sbjct: 354 TSGQLGNGEIVDRNTPVLID 373
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 148/308 (48%), Gaps = 32/308 (10%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G DV + ++ L + ++ G H + +T G+V +WG N
Sbjct: 87 VYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLAVTMAGEVQSWGRN 145
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG DS +PQ + + I+AG H+ A+ EDG +Y WG R +G++
Sbjct: 146 QNGQLGLGTTEDS-LLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR--YGNL 202
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL + P K+ SV G +V +A G H + ++ GNL T G + GQLG
Sbjct: 203 GLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFE-- 260
Query: 213 SRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
L P +V LK I + G +T ++S+G + +G N + Q+G +++
Sbjct: 261 --------DHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNND 312
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
S P + D+K + +A G H+LAL+ + ++++GR G+LG E
Sbjct: 313 DHSS-------PGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG---NGE 362
Query: 331 PVTEPTPI 338
V TP+
Sbjct: 363 IVDRNTPV 370
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ ++++G HS+AL + + ++GR + G+LG + + + PT + ITS+
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVI 71
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A ED++ ++Y++G D+GRLG N S+
Sbjct: 72 CGADHTTAY--------------------SEDEL-----QVYSWGWGDFGRLGHGNSSDV 106
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P P+ +LQ I IACG+ A+ G + WG QLG G +D L P KI+
Sbjct: 107 FT-PQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQ 165
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ V +A+G +H+ + +
Sbjct: 166 A--FESVCVKMIAAGAEHTAAVTE 187
>gi|50291009|ref|XP_447937.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527248|emb|CAG60888.1| unnamed protein product [Candida glabrata]
Length = 477
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 182/420 (43%), Gaps = 76/420 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
V G G +LGLGP ++ L +D +V + VGGMHT+ L +D +++
Sbjct: 40 VFVWGTGSMCELGLGPLAKNKEVKRPRLNPFLPQDKVGIVSIAVGGMHTLALDKDNNIWS 99
Query: 93 WGCNDEGALGREAEGDSEFIPQT------------------VNLP----------KKAVQ 124
WGCND GALGR+ G E + LP K VQ
Sbjct: 100 WGCNDYGALGRDTSGAKEKLKDANDSSDDEDGDLNELESTPTKLPFKFEGTSEKDAKIVQ 159
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVS--GIVKIASG 180
+ A D+ S LL DGT+YAWG+FR + G +G + I Q+ P + + IV++A G
Sbjct: 160 LVATDNLSSVLLSDGTIYAWGTFRCNEGILGFYQDEIEVQREPWVVPKFAKGKIVQMAGG 219
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
DH + L G + G +Q QLGR R + L P +P K + + +
Sbjct: 220 KDHILFLDEAGIVYAWGNGQQYQLGRKILD------RFRLKTLYP--LPFGLKKVKYIAS 271
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G + F ++ G ++++GLN + Q G +S ++ G + + L + +++G
Sbjct: 272 GENHCFALTETGKVVSWGLNQFGQCGIGES-IEDGGIVAVPSQVMNLPLDNDSIRTISAG 330
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV---------TEPTPIPSLQDKTIT--- 347
+HHSL L G +Y GR D +GL P P+P+ KT+
Sbjct: 331 EHHSLFLMESGALYTCGRIDMNEIGLLKKELPTYAYKDEHERVRAVPLPTKVVKTLEELD 390
Query: 348 ----------------SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+IA G+ S AI +G LY WG G Y +G G D + KI
Sbjct: 391 PEDDEDDREYKEMKFKNIAAGSHHSIAISQDGKLYTWGFGETYAVGQGPAGDDIEVPVKI 450
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 170/442 (38%), Gaps = 102/442 (23%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
V+ WG+ S +GL K + +++ P + GIV IA G H + L N+
Sbjct: 40 VFVWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPQDKVGIVSIAVGGMHTLALDKDNNI 97
Query: 194 LTAGCPEQGQLGRITQ---------RSASRNARRGMSFLE--PGEVPLK--------RKH 234
+ GC + G LGR T +S + ++ LE P ++P K K
Sbjct: 98 WSWGCNDYGALGRDTSGAKEKLKDANDSSDDEDGDLNELESTPTKLPFKFEGTSEKDAKI 157
Query: 235 IDDVFTGVYNTFISSKGSILAFGLN--NYSQLG--EADSEVQKSGNTCFFTPHLIKSLSD 290
+ V T ++ + S G+I A+G N LG + + EVQ+ P ++ +
Sbjct: 158 VQLVATDNLSSVLLSDGTIYAWGTFRCNEGILGFYQDEIEVQRE-------PWVVPKFAK 210
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSI 349
K +A G+ H L L+ G +YA+G +LG K + + P+P K + I
Sbjct: 211 GKIVQMAGGKDHILFLDEAGIVYAWGNGQQYQLGRKILDRFRLKTLYPLP-FGLKKVKYI 269
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE--------------------DDI----- 384
A G FA+ G + WG+ Q G G+ D I
Sbjct: 270 ASGENHCFALTETGKVVSWGLNQFGQCGIGESIEDGGIVAVPSQVMNLPLDNDSIRTISA 329
Query: 385 -------LNSEGKIYAFGRHDYGRLGLKNVSEPV---------TEPTPIPSLQDKTIT-- 426
L G +Y GR D +GL P P+P+ KT+
Sbjct: 330 GEHHSLFLMESGALYTCGRIDMNEIGLLKKELPTYAYKDEHERVRAVPLPTKVVKTLEEL 389
Query: 427 -----------------SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMK 468
+IA G+ S AI +G LY WG G Y +G G DDI P+K
Sbjct: 390 DPEDDEDDREYKEMKFKNIAAGSHHSIAISQDGKLYTWGFGETYAVGQGPAGDDIEVPVK 449
Query: 469 IEGKQLNNYTVLQVASGGQHSV 490
I ++ SGGQ SV
Sbjct: 450 ITNTATKEVDMVLAGSGGQFSV 471
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 147/355 (41%), Gaps = 50/355 (14%)
Query: 45 GDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG---CNDEGAL 101
GD +L P + K E +V++V + L DG +Y WG CN EG L
Sbjct: 131 GDLNELESTPTKLPFKFEGTSEKDAKIVQLVATDNLSSVLLSDGTIYAWGTFRCN-EGIL 189
Query: 102 G-REAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G + E + + P V PK K VQ++ G H + L E G VYAWG+ + +
Sbjct: 190 GFYQDEIEVQREPWVV--PKFAKGKIVQMAGGKDHILFLDEAGIVYAWGNGQQYQLGRKI 247
Query: 157 KGEGIQKT----PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
KT P L+ V IASG +H LT G +++ G + GQ G
Sbjct: 248 LDRFRLKTLYPLPFGLKKVK---YIASGENHCFALTETGKVVSWGLNQFGQCG------I 298
Query: 213 SRNARRGMSFLEPGEV---PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
+ G P +V PL I + G +++ F+ G++ G + +++G
Sbjct: 299 GESIEDGGIVAVPSQVMNLPLDNDSIRTISAGEHHSLFLMESGALYTCGRIDMNEIGLLK 358
Query: 269 SEV--------QKSGNTCFFTPHLIKSL--------------SDKKFTMLASGQHHSLAL 306
E+ + ++K+L + KF +A+G HHS+A+
Sbjct: 359 KELPTYAYKDEHERVRAVPLPTKVVKTLEELDPEDDEDDREYKEMKFKNIAAGSHHSIAI 418
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+ +GK+Y +G + +G + + P I + K + + G+ F++ +
Sbjct: 419 SQDGKLYTWGFGETYAVGQGPAGDDIEVPVKITNTATKEVDMVLAGSGGQFSVSA 473
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 110/282 (39%), Gaps = 70/282 (24%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ F+ GS+ GL ++ + EV++ F + +S +A G H+
Sbjct: 39 DVFVWGTGSMCELGLGPLAK----NKEVKRPRLNPFLPQDKVGIVS------IAVGGMHT 88
Query: 304 LALNSEGKIYAFGRHDYGRLG---------LKN-----------VSEPVTEPTPIP---- 339
LAL+ + I+++G +DYG LG LK+ ++E + PT +P
Sbjct: 89 LALDKDNNIWSWGCNDYGALGRDTSGAKEKLKDANDSSDDEDGDLNELESTPTKLPFKFE 148
Query: 340 --SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRH 397
S +D I + + +S + S+G +Y WG R
Sbjct: 149 GTSEKDAKIVQLVATDNLSSVLLSDGTIYAWGTF------------------------RC 184
Query: 398 DYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ G LG ++ E EP +P I +A G +D G++Y WG G YQLG
Sbjct: 185 NEGILGFYQDEIEVQREPWVVPKFAKGKIVQMAGGKDHILFLDEAGIVYAWGNGQQYQLG 244
Query: 457 NGKEDDI----LEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
D L P+ K+ V +ASG H L +
Sbjct: 245 RKILDRFRLKTLYPLPFGLKK-----VKYIASGENHCFALTE 281
>gi|50310715|ref|XP_455379.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644515|emb|CAG98087.1| KLLA0F06600p [Kluyveromyces lactis]
Length = 480
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 190/413 (46%), Gaps = 64/413 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D +V GGMHT+ L D +++
Sbjct: 47 IFVWGTGSMCELGLGPLAKNKEVKRPRLNPLLPRDEAKIVSFAAGGMHTLALDADNNIWS 106
Query: 93 WGCNDEGALGREAEGDSEFIPQT--------------------VNLPK--------KAVQ 124
WG ND GALGR+ G E + +P+ + VQ
Sbjct: 107 WGTNDSGALGRDTSGAVEKLKDMDANDSDDDEDGDLNEIESTPTKIPRDSLPLDELRCVQ 166
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVS---GIVKIAS 179
I+A D+ S AL E+G VYAWG+FR + G +G + I QKTP + + S IV++A+
Sbjct: 167 IAATDNLSAALFENGDVYAWGTFRCNEGILGFYRDEITVQKTPWIIPNFSKKAKIVQMAA 226
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLG RI +RS R L+P P +I +
Sbjct: 227 GKDHILFLDETGIVYAWGNGQQQQLGRRILERSRLRT-------LDPR--PFGLDNIKYI 277
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G ++F +S+ G + ++GLN + Q G +E++ + P + + ++
Sbjct: 278 SSGENHSFALSTDGKLYSWGLNQFGQCG-ISTELED--GSLVSVPTEVILPEGVEIDSVS 334
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPS-LQD-KTI 346
+G+HH+L L G +Y+ GR D +G+ P P+P+ L+D +
Sbjct: 335 AGEHHTLILAKSGDLYSCGRLDMFEVGISKDKLPEYTYKDVHGKARSIPLPTKLEDVPSF 394
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+IA G+ S AI G++Y WG G Y +G G D + + +I D+
Sbjct: 395 KAIAAGSHHSLAIAKNGIVYSWGFGETYAVGLGPSGDDIETPTRIKNTATQDH 447
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 187/452 (41%), Gaps = 92/452 (20%)
Query: 118 LPKKAVQISAGDSH-----SVALLEDGTVYAWGSFRDSHGSMGL----KGEGIQK---TP 165
L K V I++ D + SV L+ ++ WG+ S +GL K + +++ P
Sbjct: 22 LNHKFVSINSQDDYKHLYRSVVPLD---IFVWGT--GSMCELGLGPLAKNKEVKRPRLNP 76
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR----------- 214
L + IV A+G H + L + N+ + G + G LGR T + +
Sbjct: 77 LLPRDEAKIVSFAAGGMHTLALDADNNIWSWGTNDSGALGRDTSGAVEKLKDMDANDSDD 136
Query: 215 NARRGMSFLE--PGEVPLKRKHIDDV------FTGVYNTFISSKGSILAFGLN--NYSQL 264
+ ++ +E P ++P +D++ T + + G + A+G N L
Sbjct: 137 DEDGDLNEIESTPTKIPRDSLPLDELRCVQIAATDNLSAALFENGDVYAWGTFRCNEGIL 196
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFG---RHDY 320
G E+ T TP +I + S K K +A+G+ H L L+ G +YA+G +
Sbjct: 197 GFYRDEI-----TVQKTPWIIPNFSKKAKIVQMAAGKDHILFLDETGIVYAWGNGQQQQL 251
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--- 377
GR L+ +P P I I+ G SFA+ ++G LY WG+ Q G
Sbjct: 252 GRRILERSRLRTLDPRPFGL---DNIKYISSGENHSFALSTDGKLYSWGLNQFGQCGIST 308
Query: 378 -----------------NGKEDD----------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D IL G +Y+ GR D +G+ P
Sbjct: 309 ELEDGSLVSVPTEVILPEGVEIDSVSAGEHHTLILAKSGDLYSCGRLDMFEVGISKDKLP 368
Query: 411 ---------VTEPTPIPS-LQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
P+P+ L+D + +IA G+ S AI G++Y WG G Y +G G
Sbjct: 369 EYTYKDVHGKARSIPLPTKLEDVPSFKAIAAGSHHSLAIAKNGIVYSWGFGETYAVGLGP 428
Query: 460 E-DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
DDI P +I+ +++++ + GGQ S+
Sbjct: 429 SGDDIETPTRIKNTATQDHSIVFIGCGGQFSI 460
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 216/487 (44%), Gaps = 73/487 (14%)
Query: 37 GVVLTCGQGDTGQLG---LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G +GQLG L P R+ V L V + G H V L DG V+ W
Sbjct: 119 GDVWAWGDNASGQLGDGTLTPRAQPRR----VSGLTQGVSLASGFAHAVALRADGTVWAW 174
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G N LG S +P V V + AG S S+AL DGTV+AWG R +G
Sbjct: 175 GDNRSNQLGSATLTRSP-VPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWGDNR--YGQ 231
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+G + P+++ ++ + I++GA H + L + G G GQLG T
Sbjct: 232 LGDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQLGDGT----- 286
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
+R + L + V G Y++ + + G++ A+G N Y QLG
Sbjct: 287 -TVQRTLPVL------IGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLG------- 332
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+GN L ++ L +G HS+AL ++G +++G + +G+LG +P
Sbjct: 333 -TGNLTSSAVPLHAGMTGG--VTLVAGFRHSVALGADGTAWSWGDNVFGQLG-DTTFQPR 388
Query: 333 TEPTPIPSLQ----DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----- 383
P + L D T G + + + G L+ WG N QLGNG + +
Sbjct: 389 MAPVQVTGLALGRADAT-----SGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPL 443
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
L +G ++++G + YG+LG ++ T P +P L +
Sbjct: 444 PVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRST-PVQVPGLTG--V 500
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
TSIA G+ S A+ S G ++GWG QLG+G D +P+++ G L N ++ +A+G
Sbjct: 501 TSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSG--LTN--IVSIAAG 556
Query: 486 GQHSVIL 492
G HS+ L
Sbjct: 557 GGHSLAL 563
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 207/456 (45%), Gaps = 59/456 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G GQLG G V ++T ++ L VV G H++ + DG V+ WG N
Sbjct: 269 GTAWAWGYNAFGQLGDGTTV--QRTLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDN 326
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
LG S +P + V + AG HSVAL DGT ++WG + G +G
Sbjct: 327 RYRQLG-TGNLTSSAVPLHAGM-TGGVTLVAGFRHSVALGADGTAWSWGD--NVFGQLGD 382
Query: 157 KGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ P+++ ++ G SG H VML + G L G QGQLG TQ+++S
Sbjct: 383 TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSL- 441
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
+P+ I V +G +T + G++ ++G N Y QLG+ + +S
Sbjct: 442 -----------PLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDG-TRTDRS 489
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + L+ T +A+G +HSLAL S G ++ +G + YG+LG + T+
Sbjct: 490 ------TPVQVPGLT--GVTSIATGDYHSLALRSNGTVWGWGFNRYGQLG-DGTTVDRTQ 540
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---------- 384
P + L + I SIA G S A+ S+G ++ +G QLGNG
Sbjct: 541 PVQVSGLTN--IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLG 598
Query: 385 --------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L ++G ++A+G + G+LG+ ++ P + L ITSI
Sbjct: 599 NVVSLAAGKMYSLALRADGTVWAWGYNASGQLGV-GTTQGSAVPLQVSGL--SAITSITA 655
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
G S A+ S+G ++ WG QLGNG D+ L P
Sbjct: 656 GTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTP 691
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 211/469 (44%), Gaps = 77/469 (16%)
Query: 22 VTSEAVPTLKCKTGG----------------GVVLTCGQGDTGQLGLGPDVMERKTFALV 65
+TS AVP TGG G + G GQLG D + A V
Sbjct: 336 LTSSAVPLHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLG---DTTFQPRMAPV 392
Query: 66 EDLDNVV---EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
+ + + G +HTV L +G+++ WG N++G LG + +S +P VNL
Sbjct: 393 QVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSS-LPLPVNL-TGI 450
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+S+G H+ AL DGTV++WG+ + +G +G + TP+++ ++G+ IA+G
Sbjct: 451 TSVSSGHRHTAALRLDGTVWSWGT--NQYGQLGDGTRTDRSTPVQVPGLTGVTSIATGDY 508
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H + L S G + G GQLG T + +P +V + G
Sbjct: 509 HSLALRSNGTVWGWGFNRYGQLGDGTT----------VDRTQPVQVSGLTNIVSIAAGGG 558
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ + S G++ AFG N QLG T +T ++++ LA+G+ +
Sbjct: 559 HSLALRSDGTVWAFGYNFDGQLGNG---------TRTWTILPVQAVGLGNVVSLAAGKMY 609
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
SLAL ++G ++A+G + G+LG+ ++ P + L ITSI G S A+ S+
Sbjct: 610 SLALRADGTVWAWGYNASGQLGV-GTTQGSAVPLQVSGL--SAITSITAGTYHSLALRSD 666
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G ++ WG QLGNG D+ L P + S+ +
Sbjct: 667 GWVWAWGFNFEGQLGNGTSDNRLT---------------------------PGLVVSMSN 699
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
T +I G+ S A+ ++G L+ WG+ + QLG G + P++++G
Sbjct: 700 AT--AIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQVQG 746
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 202/453 (44%), Gaps = 74/453 (16%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V + VG H++ + +G V+ WG N G LG D + P V AV ++AGD +
Sbjct: 53 VRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQD-KAAPVQVAGVASAVSVAAGDQY 111
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+AL E+G V+AWG ++ G +G + P ++ ++ V +ASG H V L + G
Sbjct: 112 SLALDENGDVWAWGD--NASGQLGDGTLTPRAQPRRVSGLTQGVSLASGFAHAVALRADG 169
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFI 247
+ G QLG T L VP+ + D+ G + +
Sbjct: 170 TVWAWGDNRSNQLGSAT--------------LTRSPVPIPVPGLSDIVAVVAGGSSSLAL 215
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G++ A+G N Y QLG+ + V+++ P + +L T +++G +H+LAL
Sbjct: 216 RADGTVWAWGDNRYGQLGDG-TTVRRA------APVRVANL--DAVTHISAGAYHALALR 266
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT-SIACGNCVSFAIDSEGVLY 366
++G +A+G + +G+LG + T +P L T T ++ GN S A+ ++G ++
Sbjct: 267 ADGTAWAWGYNAFGQLG-----DGTTVQRTLPVLIGLTETRTVVAGNYHSLAVRTDGAVW 321
Query: 367 GWGMGNGYQLGNG-----------------------KEDDILNSEGKIYAFGRHDYGRLG 403
WG QLG G + L ++G +++G + +G+LG
Sbjct: 322 AWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLG 381
Query: 404 LKNVSEPVTEPTPIPSL----QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
+P P + L D T G + + + G L+ WG N QLGNG
Sbjct: 382 -DTTFQPRMAPVQVTGLALGRADAT-----SGQLHTVMLGANGRLWAWGDNNQGQLGNGT 435
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ + P+ + N + V+SG +H+ L
Sbjct: 436 QQNSSLPLPV-----NLTGITSVSSGHRHTAAL 463
>gi|402880198|ref|XP_003903699.1| PREDICTED: regulator of chromosome condensation-like [Papio anubis]
Length = 300
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ +VY++GCN
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSSQVYSFGCN 111
Query: 97 DEGALGREAE-GDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ SE IP V L +K VQ+SAGDSH+ AL EDG V+ WGSF+D++G +G
Sbjct: 112 DEGALGRDTSVKGSEMIPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFQDNNGVIG 171
Query: 156 LKGEGIQKT--PLKLESVSGIVKIAS 179
L E ++K+ P++++ +VK+AS
Sbjct: 172 LL-EPMKKSMVPVQVQLDVPVVKVAS 196
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 139/268 (51%), Gaps = 28/268 (10%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + + G +L G + QLG ++ +++ P L+ D +G H
Sbjct: 44 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERK------KPALVSIPED--VVQAEAGGMH 95
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++ L+ ++Y+FG +D G LG ++ S +E P + + ++ G+ + A+ +
Sbjct: 96 TVCLSKSSQVYSFGCNDEGALG-RDTSVKGSEMIPGKVELQEKVVQVSAGDSHTAALTED 154
Query: 363 GVLYGWGMGNGYQLGNG-------KEDDILNSEG-------KIYAFGRHDYGRLGLKNVS 408
G ++ WG +Q NG + ++ + K+ + G+ +YGRLGL +
Sbjct: 155 GRVFLWG---SFQDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASLGQAEYGRLGLGEGA 211
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D P++
Sbjct: 212 EEKSIPTLISRL--PAVSSVACGASVGYAVTKDGCVFAWGMGTNYQLGTGQDEDAWSPVE 269
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ GKQL N+ VL V+SGGQH+V+L K K
Sbjct: 270 MRGKQLENHVVLSVSSGGQHAVLLVKDK 297
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 37/256 (14%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVML 187
SH E G V G + G +GL GE + +K P + +V+ +G H V L
Sbjct: 43 SHRSHSTEPGLVLTLG--QGDVGQLGL-GENVMERKKPALVSIPEDVVQAEAGGMHTVCL 99
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ + + GC ++G LGR T S + PG+V L+ K + + +
Sbjct: 100 SKSSQVYSFGCNDEGALGRDTSVKGSE--------MIPGKVELQEKVVQVSAGDSHTAAL 151
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G + +G S +G P K +M+ + +
Sbjct: 152 TEDGRVFLWG-----------SFQDNNGVIGLLEPM--------KKSMVPVQVQLDVPVV 192
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
K+ + G+ +YGRLGL +E + PT I L ++S+ACG V +A+ +G ++
Sbjct: 193 ---KVASLGQAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGCVFA 247
Query: 368 WGMGNGYQLGNGKEDD 383
WGMG YQLG G+++D
Sbjct: 248 WGMGTNYQLGTGQDED 263
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V + GQ + G+LGLG E+ L+ L V V G +T+DG V+ WG
Sbjct: 194 VASLGQAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGCVFAWGMGTN 253
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
LG G E V + K ++ +S+G H+V L++D
Sbjct: 254 YQLG---TGQDEDAWSPVEMRGKQLENHVVLSVSSGGQHAVLLVKD 296
>gi|270004502|gb|EFA00950.1| hypothetical protein TcasGA2_TC003860 [Tribolium castaneum]
Length = 161
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 92/123 (74%), Gaps = 2/123 (1%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
GV+L G GD GQLGLGPDV+E+ ALV+ D +V++ GGMHTVCLT++GK+ ++GCN
Sbjct: 37 GVLLVTGAGDCGQLGLGPDVLEKSRPALVQTSDEIVDICAGGMHTVCLTKEGKILSFGCN 96
Query: 97 DEGALGREAEG--DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
DEGALGR EG D+E P V LP K +QI+AGDSHS ALL+DG V+AWG+FR+ +
Sbjct: 97 DEGALGRITEGKEDAESTPGEVELPGKVIQITAGDSHSAALLDDGRVFAWGTFREFESGL 156
Query: 155 GLK 157
+K
Sbjct: 157 KVK 159
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
RR S E G KR V + +G +L G + QLG ++KS
Sbjct: 5 RRRPSTTEAGATKPKRAKF--TLDSVKLPETTREGVLLVTGAGDCGQLGLGPDVLEKS-- 60
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P L+++ SD+ + A G H ++ L EGKI +FG +D G LG + E T
Sbjct: 61 ----RPALVQT-SDEIVDICAGGMH-TVCLTKEGKILSFGCNDEGALGRITEGKEDAEST 114
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
P + I G+ S A+ +G ++ WG ++ G
Sbjct: 115 PGEVELPGKVIQITAGDSHSAALLDDGRVFAWGTFREFESG 155
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL + ++K+ P +++ IV I +G H V LT G +L+ GC ++G LGRIT+
Sbjct: 48 GQLGLGPDVLEKSRPALVQTSDEIVDICAGGMHTVCLTKEGKILSFGCNDEGALGRITEG 107
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
+ PGEV L K I ++ + G + A+G
Sbjct: 108 KEDAES-------TPGEVELPGKVIQITAGDSHSAALLDDGRVFAWG 147
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE---PGEVPLKRKHIDDVFTGVYN 244
T G LL G + GQLG G LE P V + +D G++
Sbjct: 34 TREGVLLVTGAGDCGQLGL------------GPDVLEKSRPALVQTSDEIVDICAGGMHT 81
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ +G IL+FG N+ LG + + TP ++ K + +G HS
Sbjct: 82 VCLTKEGKILSFGCNDEGALGR----ITEGKEDAESTPGEVELPG--KVIQITAGDSHSA 135
Query: 305 ALNSEGKIYAFGRHDYGRLGLK 326
AL +G+++A+G GLK
Sbjct: 136 ALLDDGRVFAWGTFREFESGLK 157
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 183/378 (48%), Gaps = 33/378 (8%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD---- 69
E+P V + S G V+ + G+G+ GQLG G D +R ++ D
Sbjct: 18 EDPPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHG-DAEDRLVPTVLSGFDAAAP 76
Query: 70 NVVEVVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS 126
+ V+ G HT +ED +VY+WG D G LG D F PQ V + K QI+
Sbjct: 77 GITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDV-FTPQPVKALQGIKIKQIA 135
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHF 184
GDSH +A+ G V +WG R+ +G +GL P K++S G+ IA+GA+H
Sbjct: 136 CGDSHCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHT 193
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVY 243
+T G+L G G LG RN R L P +V ++ + + + G
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGL-----GDRNDR-----LVPEKVSSVEGEKMVLIACGWR 243
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+T +SS GS+ +G + Y QLG D E PH +++L D + ++ G H
Sbjct: 244 HTITVSSSGSLYTYGWSKYGQLGHGDFEDH-------LVPHKLEALKDSSISQISGGWRH 296
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++AL S+GK+Y +G + +G++G+ + + P + +D+ + +ACG + A +
Sbjct: 297 TMALTSDGKLYGWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQKVAQVACGWRHTLAFTEK 355
Query: 363 GVLYGWGMGNGYQLGNGK 380
++ WG G QLG+G+
Sbjct: 356 KNVFSWGRGTSGQLGHGE 373
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 158/352 (44%), Gaps = 48/352 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKR 232
+V +++GA H V L + L + G E GQLG + G PG
Sbjct: 24 VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPG------ 77
Query: 233 KHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
I V G +T + + + ++G ++ +LG +S + FTP +K+L
Sbjct: 78 --ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNS-------SDVFTPQPVKALQG 128
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K +A G H LA+ G++ ++GR+ G+LGL + + P I S + + IA
Sbjct: 129 IKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQSFEGVCVKMIA 187
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------- 385
G + A+ +G LYGWG G LG G +D L
Sbjct: 188 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTIT 247
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+S G +Y +G YG+LG + + + P + +L+D +I+ I+ G + A+ S+G L
Sbjct: 248 VSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSSISQISGGWRHTMALTSDGKL 306
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YGWG Q+G G DD P+++ K + V QVA G +H++ + K
Sbjct: 307 YGWGWNKFGQVGVGDTDDHCFPVQV--KFPEDQKVAQVACGWRHTLAFTEKK 356
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 54/385 (14%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE----SVSGI 174
P V +SAG SHSVALL + +WG R G +G + P L + GI
Sbjct: 21 PPAVVLVSAGASHSVALLAGNVLCSWG--RGEDGQLGHGDAEDRLVPTVLSGFDAAAPGI 78
Query: 175 VKIASGADHFVMLT-SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKR 232
+ GADH + + + G G GR+ ++S P V L+
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWG---WGDFGRLGHGNSS-------DVFTPQPVKALQG 128
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ G + ++G N QLG +E P I+S
Sbjct: 129 IKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDS-------LLPQKIQSFEGV 181
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S++ + + IAC
Sbjct: 182 CVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PEKVSSVEGEKMVLIAC 240
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + + S G LY +G QLG+G +D L
Sbjct: 241 GWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMAL 300
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+GK+Y +G + +G++G+ + + P + +D+ + +ACG + A + ++
Sbjct: 301 TSDGKLYGWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQKVAQVACGWRHTLAFTEKKNVF 359
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIE 470
WG G QLG+G+ D +P+ I+
Sbjct: 360 SWGRGTSGQLGHGEIVDRNKPVMID 384
>gi|363749193|ref|XP_003644814.1| hypothetical protein Ecym_2251 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888447|gb|AET37997.1| Hypothetical protein Ecym_2251 [Eremothecium cymbalariae
DBVPG#7215]
Length = 483
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 178/393 (45%), Gaps = 65/393 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D +V VGGMH + L ++ +++
Sbjct: 48 IFVWGTGSMCELGLGPLAKNKEVKRPRLNPYLPRDKVGIVSYAVGGMHCLALDKENNLWS 107
Query: 93 WGCNDEGALGREAEGDSE--------------------------FIPQTVNLP---KKAV 123
WG ND GALGR+ G +E +P+ +LP K +
Sbjct: 108 WGTNDSGALGRDTSGANEQLRDMDYDQSSGDEDGDLNELESTPTMLPRD-SLPLDQMKVI 166
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVSG--IVKIAS 179
Q++A D+ S L E+G VYAWG+FR + G +G + IQ P ++ + +V++A+
Sbjct: 167 QLAATDNMSCVLFENGDVYAWGTFRCNEGMLGFYQDAIAIQHIPWRVPRFTNAKVVQMAA 226
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR I +RS R L+P L + +
Sbjct: 227 GKDHILFLDEHGIVYAWGNGQQYQLGRKIMERSRLRT-------LDPRAFGLDG--VKYI 277
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G ++F +S G + A+GLN + Q G +EV+ P + + + +A
Sbjct: 278 ASGENHSFALSDDGRLFAWGLNQFGQCG-ISTEVKDGAMVT--VPTEVVLPENVRVKAVA 334
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNV-----------SEPVTEPTPIPSLQDKTI 346
+G+HHSL L+ G +Y FGR D +G+ +EP P P
Sbjct: 335 AGEHHSLVLDENGDLYTFGRLDMFEVGIPKSKLPESTYTDAHNEPRAVPVPTKLTGVPKF 394
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
IA G+ S AI G++Y WG G Y +G G
Sbjct: 395 NFIAAGSHHSLAIAENGIVYSWGFGETYAVGLG 427
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 111/299 (37%), Gaps = 75/299 (25%)
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
++ K+ H+ + + F+ GS+ GL ++ + EV++ P L
Sbjct: 33 QIDYKKMHVSE---EPLDIFVWGTGSMCELGLGPLAK----NKEVKR--------PRLNP 77
Query: 287 SLSDKKFTML--ASGQHHSLALNSEGKIYAFGRHDYGRLGLK------------------ 326
L K ++ A G H LAL+ E ++++G +D G LG
Sbjct: 78 YLPRDKVGIVSYAVGGMHCLALDKENNLWSWGTNDSGALGRDTSGANEQLRDMDYDQSSG 137
Query: 327 ----NVSEPVTEPTPIPS----LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+++E + PT +P L + +A + +S + G +Y WG
Sbjct: 138 DEDGDLNELESTPTMLPRDSLPLDQMKVIQLAATDNMSCVLFENGDVYAWGTF------- 190
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFA 437
R + G LG + + P +P + + +A G
Sbjct: 191 -----------------RCNEGMLGFYQDAIAIQHIPWRVPRFTNAKVVQMAAGKDHILF 233
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY---TVLQVASGGQHSVILA 493
+D G++Y WG G YQLG I+E ++ + V +ASG HS L+
Sbjct: 234 LDEHGIVYAWGNGQQYQLGR----KIMERSRLRTLDPRAFGLDGVKYIASGENHSFALS 288
>gi|212545723|ref|XP_002153015.1| pheromone response protein, putative [Talaromyces marneffei ATCC
18224]
gi|210064535|gb|EEA18630.1| pheromone response protein, putative [Talaromyces marneffei ATCC
18224]
Length = 557
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 180/398 (45%), Gaps = 65/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVME----RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
V G +LG+G + R F V V++ GGMH + LT D KV TWG
Sbjct: 133 VFAFGSNSNAELGMGDTFKKADCPRPKFNSVLSDAGAVQISTGGMHGIALTHDNKVLTWG 192
Query: 95 CNDEGALGREAEGD------------------------SEFIPQTVNLP---KKAV--QI 125
ND+GALGR+ + E P ++L K V Q+
Sbjct: 193 VNDQGALGRDTNWEGGLVDMEKADESDSDEEEEIEVNPKEATPSVIDLSGVEKGTVFTQV 252
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHF 184
A DS S AL +DG VY WG+FR+S+G G E +Q TP + + + KI +G++H
Sbjct: 253 VAADSASFALTDDGFVYGWGTFRNSNGVWGFSPEVMVQNTPTLIPGLKNVTKIVAGSNHV 312
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L + G + + G EQ QL R R R A+ L P +V KR + D+ G +
Sbjct: 313 LALLTDGTVYSWGSGEQDQLAR---RLVERRAKE--QGLIPQKVGSKRGFV-DIAAGADH 366
Query: 245 TFISSK-GSILAFGLNNYSQLGEADSEVQKSGNT--CFFTPHLIKSLS-DKKFTMLASGQ 300
+F K GS+ +GLNNY Q G A K+G + P +I SL K T +++G
Sbjct: 367 SFALHKDGSVYGWGLNNYGQTGIA----SKAGESEAGVLKPTVIPSLKGQNKITQISAGN 422
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQDKTI 346
++LA+ + + +GR D G+ + P +T T IP+L+ +
Sbjct: 423 FNTLAITDKNECLVWGRIDNYATGIDASTLPKEDVIFDDRDRPRILTNATRIPNLE---V 479
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
G + A+ ++G Y WG + Q G +DDI
Sbjct: 480 AYATYGTEHAIAVTTDGKAYSWGFNSSNQTGQPGDDDI 517
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 24/248 (9%)
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G++ ++G QL A V++ P K S + F +A+G HS AL+
Sbjct: 317 TDGTVYSWGSGEQDQL--ARRLVERRAKEQGLIPQ--KVGSKRGFVDIAAGADHSFALHK 372
Query: 309 EGKIYAFGRHDYGRLGLKNV---SEP-VTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEG 363
+G +Y +G ++YG+ G+ + SE V +PT IPSL+ + IT I+ GN + AI +
Sbjct: 373 DGSVYGWGLNNYGQTGIASKAGESEAGVLKPTVIPSLKGQNKITQISAGNFNTLAITDKN 432
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
WG + Y G + L E I F D R+ +T T IP+L+
Sbjct: 433 ECLVWGRIDNY--ATGIDASTLPKEDVI--FDDRDRPRI--------LTNATRIPNLE-- 478
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+ G + A+ ++G Y WG + Q G +DDI I K + +
Sbjct: 479 -VAYATYGTEHAIAVTTDGKAYSWGFNSSNQTGQPGDDDIKVATLINSKAVQEKKFVWAG 537
Query: 484 SGGQHSVI 491
+GGQ+ +I
Sbjct: 538 AGGQYGMI 545
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 113/286 (39%), Gaps = 68/286 (23%)
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
V NT +++ + AFG N+ ++LG D+ + C P LSD +++G
Sbjct: 122 VINTAPTTRLDVFAFGSNSNAELGMGDTFKKAD---CP-RPKFNSVLSDAGAVQISTGGM 177
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSE--------------------PVTEPTPIPSL 341
H +AL + K+ +G +D G LG E V PS+
Sbjct: 178 HGIALTHDNKVLTWGVNDQGALGRDTNWEGGLVDMEKADESDSDEEEEIEVNPKEATPSV 237
Query: 342 QD-------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
D T + + SFA+ +G +YGWG NS G ++ F
Sbjct: 238 IDLSGVEKGTVFTQVVAADSASFALTDDGFVYGWGT-------------FRNSNG-VWGF 283
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
+ ++N PT IP L K +T I G+ A+ ++G +Y WG G Q
Sbjct: 284 SPE----VMVQNT------PTLIPGL--KNVTKIVAGSNHVLALLTDGTVYSWGSGEQDQ 331
Query: 455 LG------NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
L KE ++ P K+ K+ + +A+G HS L K
Sbjct: 332 LARRLVERRAKEQGLI-PQKVGSKR----GFVDIAAGADHSFALHK 372
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 207/472 (43%), Gaps = 71/472 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G + T G GQLG G D++ R T A + + VV + GG H++ L DG V++W
Sbjct: 213 TADGRLWTWGGNVDGQLGTG-DLVGRSTAAALPGMTGVVALSGGGSHSLILKMDGSVWSW 271
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ND G LG G P +P + V ++ G HSVAL DGTV+AWGS +
Sbjct: 272 GKNDAGQLGL---GSVVSTPTPTQVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328
Query: 152 GSMGLKGEGIQKTPLKLESVSGIVKI----ASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G+G Q L V+G+ ++ A G H V + G + G +GQ+G
Sbjct: 329 -----LGDGTQTQRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDG 383
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
T + L P + + D G + + G+ +GLN SQLG+
Sbjct: 384 TY----------LMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGD- 432
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--- 324
T P ++ L+ + +++G +HSLAL +G ++ +G + +G +G
Sbjct: 433 --------GTTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGT 484
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------ 378
N S+PV + ++ ++A GN S A+ +G ++ WG + QLG+
Sbjct: 485 ALNRSQPVKVSGTLVAM------TVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPT 538
Query: 379 -------------------GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
G+ L ++G ++ +GR D +NV + P +
Sbjct: 539 RNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQDT-CADPENVGRVLRVPEQVQG 597
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
L D ++ G C S + ++G L+ WG QL +G D + P +++G
Sbjct: 598 LTDA--VAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDG 647
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 219/488 (44%), Gaps = 70/488 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G + GQLG G + A V L ++ + G +H++ L DG V++WG N
Sbjct: 66 GTVWSWGGNNYGQLGTG-STRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWGAN 124
Query: 97 DEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G L GD I ++V P V I+AG SHS+ L DGTV+AWG ++ G
Sbjct: 125 TNGQL-----GDGTLISRSVPAPVPGLTNVVAIAAGFSHSMVLKADGTVWAWG--LNAAG 177
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQR 210
+G + TP+++ ++G+ IA+G H + LT+ G L T G GQLG + R
Sbjct: 178 QLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGR 237
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
S + A GM+ G V L G ++ + GS+ ++G N+ QLG
Sbjct: 238 STAA-ALPGMT----GVVALSGG-------GSHSLILKMDGSVWSWGKNDAGQLGL---- 281
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ TP + + + G HS+AL +G ++A+G + +LG ++
Sbjct: 282 -----GSVVSTPTPTQVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQ 336
Query: 331 PVTEPTPIPSLQDKTITSIACGNCV-SFAIDSEGVLYGWGMGNGYQLGNG---------- 379
++ P + L + +A G + S A+ G ++ WG + Q+G+G
Sbjct: 337 RLS-PCQVTGLTQ--VKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLMKLVPTT 393
Query: 380 -----KEDDI---------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ D+ L +G + +G + +LG + P P+ L +
Sbjct: 394 ARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTA---RPLPVQVLNLTRV 450
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+++ G S A+ +G ++GWG +G+G + +P+K+ G + VASG
Sbjct: 451 AAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVSG----TLVAMTVASG 506
Query: 486 GQHSVILA 493
HS+ L+
Sbjct: 507 NFHSLALS 514
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 214/449 (47%), Gaps = 65/449 (14%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
V+ G H++ L DG V++WG N+ G LG + + +P V I AG+ HS
Sbjct: 51 SVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNP-MPARVWRLFSITAIGAGELHS 109
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRG 191
+AL DGTV++WG+ +++G +G G I ++ P + ++ +V IA+G H ++L + G
Sbjct: 110 LALKSDGTVWSWGA--NTNGQLG-DGTLISRSVPAPVPGLTNVVAIAAGFSHSMVLKADG 166
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSK 250
+ G GQLG T RR L P +V L + D+ G V++ +++
Sbjct: 167 TVWAWGLNAAGQLGDGTP------TRR----LTPVQV-LGLTGVKDIAAGNVHSLALTAD 215
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + +G N QLG D V +S T P + ++ L+ G HSL L +G
Sbjct: 216 GRLWTWGGNVDGQLGTGD-LVGRS--TAAALPGMTGVVA------LSGGGSHSLILKMDG 266
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
++++G++D G+LGL +V V+ PTP +P L + + ++ G S A+ +G ++ W
Sbjct: 267 SVWSWGKNDAGQLGLGSV---VSTPTPTQVPGLTE--MVAVTGGGQHSVALRVDGTVWAW 321
Query: 369 GMGNGYQLGNGKEDDILN-------------------------SEGKIYAFGRHDYGRLG 403
G QLG+G + L+ G+++A+G + G++G
Sbjct: 322 GSNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVG 381
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ PT L ++ ++ G + A+ +G +GWG+ QLG+G
Sbjct: 382 DGTYLMKLV-PTTARVLVER--ADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTAR 438
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+++ LN V V++G HS+ L
Sbjct: 439 PLPVQV----LNLTRVAAVSAGTYHSLAL 463
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 201/505 (39%), Gaps = 99/505 (19%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG-- 94
G V G GQLG G R V +L+ VV + GG H++ L DG V+ WG
Sbjct: 517 GSVWAWGDNSLGQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQ 576
Query: 95 --CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
C D +GR +P+ V AV + AG HSV L DGT++AWG R++ G
Sbjct: 577 DTCADPENVGRVLR-----VPEQVQGLTDAVAVRAGRCHSVVLRADGTLWAWG--RNAEG 629
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+ + TP +++ ++G++ + G++ + L + G G QGQLG
Sbjct: 630 QLADGTFTDRMTPARVDGLTGVISFSVGSEQTLALKADGTAWAWGPNAQGQLGG------ 683
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEA- 267
G+S P P + + DV T V+ + ++ A+G N Q+G+
Sbjct: 684 ------GLSV--PRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGA 735
Query: 268 ------------------------------DSEVQKSG---------NTCFFTPHLIKSL 288
D VQ +G T F + +
Sbjct: 736 LDWQAAPVRSGLAASRGLAAATQYSLGIALDGSVQSTGANASGQLGDGTLFPRAEPVPVI 795
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+ +A G H LAL ++G++ ++G + G LG + P + L + S
Sbjct: 796 GLSECRAIAGGATHGLALKTDGRVLSWGANAEGELG-DGTTVARRAPAVVGPLAG--VLS 852
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------I 384
IA G S A+ +G + WG QLG+G
Sbjct: 853 IAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVAAIAAGDGFSLA 912
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L +G ++A+G + G+LG + P+ + +T++A G S A+ +G L
Sbjct: 913 LKHDGTVWAWGGNTLGQLGDNTTLRSLV---PVRTQALTGVTAVAAGRNHSLALKGDGTL 969
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKI 469
+ WG +LG+G + L P+++
Sbjct: 970 WAWGSNTYGELGDGTQARKLAPVQV 994
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 168/353 (47%), Gaps = 39/353 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G +GQLG G + R V L + G H + L DG+V +WG N
Sbjct: 767 GSVQSTGANASGQLGDG-TLFPRAEPVPVIGLSECRAIAGGATHGLALKTDGRVLSWGAN 825
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EG LG + + P V + I+ G HS+ALL DG+V AWGS + G +G
Sbjct: 826 AEGELG-DGTTVARRAPAVVGPLAGVLSIAVGARHSLALLGDGSVQAWGS--NIQGQLG- 881
Query: 157 KGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RITQRSASR 214
G + + P++++ ++G+ IA+G + L G + G GQLG T RS
Sbjct: 882 DGTTVSRVLPVRVQGLTGVAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSL-- 939
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKGSILAFGLNNYSQLGEADS 269
VP++ + + V T V ++ + G++ A+G N Y +LG+ +
Sbjct: 940 -------------VPVRTQALTGV-TAVAAGRNHSLALKGDGTLWAWGSNTYGELGDG-T 984
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ +K P + SL+ + L +G HHSLA+ S GK++ +GR+ +G++G S
Sbjct: 985 QARK------LAPVQVTSLTG--VSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKS 1036
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
P +P L + ++A G S A+ S+ ++ WG G+ QLG G +
Sbjct: 1037 NWQLLPAQVPGL--TSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSN 1087
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 206/473 (43%), Gaps = 58/473 (12%)
Query: 22 VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHT 81
V SE LK G G GQLG G V R V L +V V +G +H
Sbjct: 656 VGSEQTLALKAD---GTAWAWGPNAQGQLGGGLSV-PRTRPTQVPTLTDVRTVAMGAVHA 711
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
+ L +D ++ WG N EG +G A D + P L + ++A +S+ + DG+V
Sbjct: 712 LVLKDDLTLWAWGSNAEGQVGDGAL-DWQAAPVRSGL-AASRGLAAATQYSLGIALDGSV 769
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ G+ ++ G +G + P+ + +S IA GA H + L + G +L+ G +
Sbjct: 770 QSTGA--NASGQLGDGTLFPRAEPVPVIGLSECRAIAGGATHGLALKTDGRVLSWGANAE 827
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
G+LG + ARR + + P + + G ++ + GS+ A+G N
Sbjct: 828 GELG-----DGTTVARRAPAVVGP------LAGVLSIAVGARHSLALLGDGSVQAWGSNI 876
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
QLG+ + P ++ L+ +A+G SLAL +G ++A+G +
Sbjct: 877 QGQLGDGTT-------VSRVLPVRVQGLTG--VAAIAAGDGFSLALKHDGTVWAWGGNTL 927
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
G+LG + P+ + +T++A G S A+ +G L+ WG +LG+G
Sbjct: 928 GQLGDNTTLRSLV---PVRTQALTGVTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGT 984
Query: 381 EDDIL------------------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
+ L S GK++ +GR+ +G++G S P
Sbjct: 985 QARKLAPVQVTSLTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQ 1044
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+P L + ++A G S A+ S+ ++ WG G+ QLG G + L P+++
Sbjct: 1045 VPGL--TSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLRLSPVQV 1095
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 192/485 (39%), Gaps = 86/485 (17%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ V G H++ L+ DG V+ WG N G LG + P V + V ++AG H
Sbjct: 501 MTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEH 560
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+AL DGTV+ WG +D+ G + + P +++ ++ V + +G H V+L + G
Sbjct: 561 SLALKADGTVWVWGR-QDTCADPENVGR-VLRVPEQVQGLTDAVAVRAGRCHSVVLRADG 618
Query: 192 NLLTAGCPEQGQL--GRITQR----------------------------------SASRN 215
L G +GQL G T R +
Sbjct: 619 TLWAWGRNAEGQLADGTFTDRMTPARVDGLTGVISFSVGSEQTLALKADGTAWAWGPNAQ 678
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
+ G P P + + DV T V+ + ++ A+G N Q+G+ +
Sbjct: 679 GQLGGGLSVPRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDW 738
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
Q + + L+ + LA+ +SL + +G + + G + G+LG P
Sbjct: 739 QAA--------PVRSGLAASRG--LAAATQYSLGIALDGSVQSTGANASGQLG-DGTLFP 787
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------------ 379
EP P+ L + +IA G A+ ++G + WG +LG+G
Sbjct: 788 RAEPVPVIGLSE--CRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAPAVVG 845
Query: 380 ------------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+ L +G + A+G + G+LG V+ P+ + +
Sbjct: 846 PLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTT---VSRVLPVRVQGLTGVAA 902
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IA G+ S A+ +G ++ WG QLG+ L P++ + L T VA+G
Sbjct: 903 IAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLVPVRTQ--ALTGVTA--VAAGRN 958
Query: 488 HSVIL 492
HS+ L
Sbjct: 959 HSLAL 963
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 191/431 (44%), Gaps = 82/431 (19%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTW 93
G ++ G G+ GQLGLG + ER+ ++ L+ NV VV G +++ +TEDGK++TW
Sbjct: 4 GTAIIAWGSGEDGQLGLGNN-EEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTW 62
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG A SE +P V K VQ + G H +A+ + G YAWG + +
Sbjct: 63 GWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEY 120
Query: 152 GSMGLKGEGIQKT----------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
G G + E T P + + ++A+G H V+LT G++ T G P
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW- 179
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFG 257
G ITQ S VP++ + +D V +N + G++ A+G
Sbjct: 180 -PPGDITQIS----------------VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWG 222
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N Y QLG D++ + P ++ LS +A+G HS AL G++Y +GR
Sbjct: 223 NNEYGQLGTGDTQPRSQ-------PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGR 275
Query: 318 HDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++GRLG N P + L + I I+CG S A+ S+
Sbjct: 276 GEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSD-------------- 321
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKTITS------ 427
G++++FGR D+GRLG +P P IP + +T
Sbjct: 322 ------------GRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKL 369
Query: 428 IACGNCVSFAI 438
+ACG + A+
Sbjct: 370 VACGGRHTLAL 380
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 193/424 (45%), Gaps = 61/424 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ++G LG + E++ L + V + AG +S+A+ EDG ++ WG
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGW-- 64
Query: 149 DSHGSMGL-KGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G G + P +++++S IV+ A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
++ + R RR ++ + L + + G ++ ++ +G + +G
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQV--AAGGTHSVVLTREGHVWTWG------ 176
Query: 264 LGEADSEVQKSGN-TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ G+ T P ++ L ++A G H+LAL +G ++A+G ++YG+
Sbjct: 177 ------QPWPPGDITQISVPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + ++P ++P P+ L T+ IA G S A+ G +YGW
Sbjct: 229 LGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGW-------------- 273
Query: 383 DILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
GR ++GRLG N P + L + I I+CG S A+ S+
Sbjct: 274 ------------GRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSD 321
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKI-------EGKQLNNYTVLQ-VASGGQHSVILA 493
G ++ +G G+ +LG G++ +P ++ G+ N + + + VA GG+H++ L
Sbjct: 322 GRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALV 381
Query: 494 KPKP 497
+ KP
Sbjct: 382 QWKP 385
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 52/276 (18%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+I+A+G QLG ++E ++ C IK+L + + +G +SLA+ +GK
Sbjct: 6 AIIAWGSGEDGQLGLGNNEEREW--VC-----AIKALESQNVCSVVAGSRNSLAITEDGK 58
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + G LG ++ P+ + +L + I A G A+D +G Y WG G
Sbjct: 59 LFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWG-G 117
Query: 372 NGY-QLGN----------------------------------GKEDDILNSEGKIYAFGR 396
N Y Q G G +L EG ++ +G+
Sbjct: 118 NEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 177
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ + +S PV + L + IA G + A+ +G L+ WG QLG
Sbjct: 178 -PWPPGDITQISVPVR----VQGL--DMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G +P+ ++G L+ T++ +A+GG HS L
Sbjct: 231 TGDTQPRSQPIPVQG--LSGLTLVDIAAGGWHSTAL 264
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K L + +V++ GG H+V +T DG++
Sbjct: 265 TDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRM 324
Query: 91 YTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQ--------ISAGDSHSVALLE 137
+++G D G LG + G E +P + P+ + ++ G H++AL++
Sbjct: 325 FSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQ 382
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 191/431 (44%), Gaps = 82/431 (19%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTW 93
G ++ G G+ GQLGLG + ER+ ++ L+ NV VV G +++ +TEDGK++TW
Sbjct: 4 GTAIIAWGSGEDGQLGLGNN-EEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTW 62
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG A SE +P V K VQ + G H +A+ + G YAWG + +
Sbjct: 63 GWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEY 120
Query: 152 GSMGLKGEGIQKT----------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
G G + E T P + + ++A+G H V+LT G++ T G P
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW- 179
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFG 257
G ITQ S VP++ + +D V +N + G++ A+G
Sbjct: 180 -PPGDITQIS----------------VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWG 222
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N Y QLG D++ + P ++ LS +A+G HS AL G++Y +GR
Sbjct: 223 NNEYGQLGTGDTQPRSQ-------PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGR 275
Query: 318 HDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++GRLG N P + L + I I+CG S A+ S+
Sbjct: 276 GEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSD-------------- 321
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKTITS------ 427
G++++FGR D+GRLG +P P IP + +T
Sbjct: 322 ------------GRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKL 369
Query: 428 IACGNCVSFAI 438
+ACG + A+
Sbjct: 370 VACGGRHTLAL 380
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 192/423 (45%), Gaps = 61/423 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ++G LG + E++ L + V + AG +S+A+ EDG ++ WG
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGW-- 64
Query: 149 DSHGSMGL-KGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G G + P +++++S IV+ A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
++ + R RR ++ + L + + G ++ ++ +G + +G
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQV--AAGGTHSVVLTREGHVWTWG------ 176
Query: 264 LGEADSEVQKSGN-TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ G+ T P ++ L ++A G H+LAL +G ++A+G ++YG+
Sbjct: 177 ------QPWPPGDITQISVPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + ++P ++P P+ L T+ IA G S A+ G +YGW
Sbjct: 229 LGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGW-------------- 273
Query: 383 DILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
GR ++GRLG N P + L + I I+CG S A+ S+
Sbjct: 274 ------------GRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSD 321
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKI-------EGKQLNNYTVLQ-VASGGQHSVILA 493
G ++ +G G+ +LG G++ +P ++ G+ N + + + VA GG+H++ L
Sbjct: 322 GRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALV 381
Query: 494 KPK 496
+ K
Sbjct: 382 QWK 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 52/276 (18%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+I+A+G QLG ++E ++ C IK+L + + +G +SLA+ +GK
Sbjct: 6 AIIAWGSGEDGQLGLGNNEEREW--VC-----AIKALESQNVCSVVAGSRNSLAITEDGK 58
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + G LG ++ P+ + +L + I A G A+D +G Y WG G
Sbjct: 59 LFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWG-G 117
Query: 372 NGY-QLGN----------------------------------GKEDDILNSEGKIYAFGR 396
N Y Q G G +L EG ++ +G+
Sbjct: 118 NEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 177
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ + +S PV + L + IA G + A+ +G L+ WG QLG
Sbjct: 178 -PWPPGDITQISVPVR----VQGL--DMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G +P+ ++G L+ T++ +A+GG HS L
Sbjct: 231 TGDTQPRSQPIPVQG--LSGLTLVDIAAGGWHSTAL 264
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K L + +V++ GG H+V +T DG++
Sbjct: 265 TDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRM 324
Query: 91 YTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQ--------ISAGDSHSVALLE 137
+++G D G LG + G E +P + P+ + ++ G H++AL++
Sbjct: 325 FSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQ 382
>gi|170090772|ref|XP_001876608.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648101|gb|EDR12344.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 440
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 199/431 (46%), Gaps = 70/431 (16%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVM------ERKTF-- 62
+ A P K + VP K + G ++ G G+ GQ G+GPD++ +R +
Sbjct: 14 RPAPPPQLKPYFNPLPVPPQKQRPGA-ILFAWGAGNFGQFGMGPDIIHELSKPKRNVWVE 72
Query: 63 ------ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE--------GD 108
A ED + + GG+H+V + E G ++T G ND+ ALGR + G
Sbjct: 73 EKIEDGAFGEDGAGLESIAAGGLHSVLVDEKGTIWTCGVNDDAALGRITQNVPDPNNPGS 132
Query: 109 SEFIPQTVNLPK----------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-K 157
I + ++P +AV++ GDS AL DG + WGSFR + GS+G
Sbjct: 133 FLSIDELTSIPHPLQSLADDNFRAVKVVTGDSICAALSTDGELRVWGSFRVNEGSLGFSN 192
Query: 158 GEGIQKTPLKLESVS-------GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G Q P+ + +S + IA+G +H ++LT+ G++ T G EQ QLGR
Sbjct: 193 GLKHQFKPVPILELSHKPGDTEKVSSIAAGNNHLLVLTTHGSIYTWGASEQAQLGRKVLE 252
Query: 211 SASRNARRGMSFLEPGEVPL---KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
RR + P ++ L RK + V G Y++F + KG + +GLN+ Q G
Sbjct: 253 ------RRKIHGTVPEKITLGNRARKAV-TVGAGAYHSFAVDDKGDVWGWGLNSMGQTGT 305
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFT-----MLASGQHHSLALNSEGKIYAFGRHDYG 321
+ S ++ P ++ LS + + G+HH+L L S G+++A GR + G
Sbjct: 306 G---YESSDDSLVQLPQKVERLSKESLAGDVVVEIVGGEHHTLFLTSTGQVFACGRCNAG 362
Query: 322 RLGLKN-----VSEPVTEPTPIPSL-----QDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+LGL + P + P+P+ D + I+ G+ + A+ G LY WG G
Sbjct: 363 QLGLAEDDSAFQNYPDQDFIPVPTRITFPDPDDPVVQISAGSHNNSAVTKGGALYSWGQG 422
Query: 372 NGYQLGNGKED 382
+LG +E+
Sbjct: 423 IQGELGVQEEE 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 152/365 (41%), Gaps = 70/365 (19%)
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-RNARRGMSFLEPGE 227
E +G+ IA+G H V++ +G + T G + LGRITQ N +S E
Sbjct: 82 EDGAGLESIAAGGLHSVLVDEKGTIWTCGVNDDAALGRITQNVPDPNNPGSFLSIDELTS 141
Query: 228 VPLKRKHI-DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF------- 279
+P + + DD F V + + SI A L+ +L S G+ F
Sbjct: 142 IPHPLQSLADDNFRAVK---VVTGDSICA-ALSTDGELRVWGSFRVNEGSLGFSNGLKHQ 197
Query: 280 FTPHLIKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NVS 329
F P I LS K K + +A+G +H L L + G IY +G + +LG K +
Sbjct: 198 FKPVPILELSHKPGDTEKVSSIAAGNNHLLVLTTHGSIYTWGASEQAQLGRKVLERRKIH 257
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE--DD---- 383
V E + + K +T + G SFA+D +G ++GWG+ + Q G G E DD
Sbjct: 258 GTVPEKITLGNRARKAVT-VGAGAYHSFAVDDKGDVWGWGLNSMGQTGTGYESSDDSLVQ 316
Query: 384 -----------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE----- 409
L S G+++A GR + G+LGL
Sbjct: 317 LPQKVERLSKESLAGDVVVEIVGGEHHTLFLTSTGQVFACGRCNAGQLGLAEDDSAFQNY 376
Query: 410 PVTEPTPIPSL-----QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
P + P+P+ D + I+ G+ + A+ G LY WG G +LG +E+++
Sbjct: 377 PDQDFIPVPTRITFPDPDDPVVQISAGSHNNSAVTKGGALYSWGQGIQGELGV-QEEEVR 435
Query: 465 EPMKI 469
P I
Sbjct: 436 TPRVI 440
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 46/276 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF--------TPHLIKSLSDKK 292
G+++ + KG+I G+N+ + LG V N F PH ++SL+D
Sbjct: 94 GLHSVLVDEKGTIWTCGVNDDAALGRITQNVPDPNNPGSFLSIDELTSIPHPLQSLADDN 153
Query: 293 F--TMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKT--- 345
F + +G AL+++G++ +G R + G LG N + +P PI L K
Sbjct: 154 FRAVKVVTGDSICAALSTDGELRVWGSFRVNEGSLGFSNGLKHQFKPVPILELSHKPGDT 213
Query: 346 --ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG 403
++SIA GN + + G +Y WG QLG K+ L
Sbjct: 214 EKVSSIAAGNNHLLVLTTHGSIYTWGASEQAQLGR-----------KV----------LE 252
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE--D 461
+ + V E + + K +T + G SFA+D +G ++GWG+ + Q G G E D
Sbjct: 253 RRKIHGTVPEKITLGNRARKAVT-VGAGAYHSFAVDDKGDVWGWGLNSMGQTGTGYESSD 311
Query: 462 DILE--PMKIE---GKQLNNYTVLQVASGGQHSVIL 492
D L P K+E + L V+++ G H++ L
Sbjct: 312 DSLVQLPQKVERLSKESLAGDVVVEIVGGEHHTLFL 347
>gi|341896411|gb|EGT52346.1| hypothetical protein CAEBREN_18056 [Caenorhabditis brenneri]
Length = 585
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 191/384 (49%), Gaps = 39/384 (10%)
Query: 36 GGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+CG+G+ G G RK E+ N ++VV GG+H+ LT DG+V+ G
Sbjct: 167 GDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLNPIQVVAGGVHSAVLTSDGQVFMCG 226
Query: 95 CNDEG---ALGREAEGDS-EF--IP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
N++G A G E EG + EF IP + + K V ++AG S + AL + G+V AWG+
Sbjct: 227 INEKGTVPAEGVEREGSTDEFTKIPFSEEIQNEGKIVMLAAGASFTAALTDQGSVIAWGN 286
Query: 147 FRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R+S+G++ + +Q+ P+ + ++ IVKIA+G +H VML +G LLT G E G
Sbjct: 287 LRNSNGNVDVHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMG 346
Query: 203 QLGRITQRSASRNARRGMSFLEPGE---VPLKRKH--------IDDVF-TGVYNTFISSK 250
QLGR S ++ R E G+ VPL+ K+ +VF +G +
Sbjct: 347 QLGR---SSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVIAKNVFASGFWTIVHGED 403
Query: 251 GSILAFGLNNYSQLG----EAD--SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
G AFGLNNY+QLG EAD + Q + F P + ++ + G H +
Sbjct: 404 GKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAEETFVNIEGVQHVV 463
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAI 359
L+ GK++A G++ LGL N + + + +LQ D I ++ S A
Sbjct: 464 LLDGAGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTLQEINFDSKIVGVSAKLATSIAW 523
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+G Y WG QLG G +DD
Sbjct: 524 SEDGTAYAWGFDTTGQLGLGLKDD 547
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 176/412 (42%), Gaps = 72/412 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEG----IQKTPL--KLESVSGIV 175
+Q+ AG HS L DG V+ G + + + + G++ EG K P ++++ IV
Sbjct: 204 IQVVAGGVHSAVLTSDGQVFMCGINEKGTVPAEGVEREGSTDEFTKIPFSEEIQNEGKIV 263
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL----- 230
+A+GA LT +G+++ G R+++ N + E P+
Sbjct: 264 MLAAGASFTAALTDQGSVIAWG----------NLRNSNGNVDVHPLLHKMQEKPVVIVHQ 313
Query: 231 -KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFT-PHLIKS 287
KRK + + + KG +L FG QLG + ++ +S C + HL+
Sbjct: 314 AKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMGQLGRSSRTKTIRSKFMCDESGDHLVVP 373
Query: 288 LSDK---KF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
L K KF + ASG ++ +GK YAFG ++Y +LG+K V E
Sbjct: 374 LRFKNKGKFYDVIAKNVFASG-FWTIVHGEDGKYYAFGLNNYAQLGIK-----VDEADVG 427
Query: 339 PSLQDKTITSI-------ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
QD + A G +F ++ EGV + +L+ GK+
Sbjct: 428 QDGQDNRELRVFLPAEAPAFGAEETF-VNIEGVQHVV---------------LLDGAGKV 471
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAIDSEGVLYG 446
+A G++ LGL N + + + +LQ D I ++ S A +G Y
Sbjct: 472 FAMGKNTDNALGLGNWTGKDDQQHWLYDTLQEINFDSKIVGVSAKLATSIAWSEDGTAYA 531
Query: 447 WGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
WG QLG G +DD + +P +I L +++++ + QH++ILAK
Sbjct: 532 WGFDTTGQLGLGLKDDDDKMVGKPEEISSAHLEDHSIIGASISDQHTLILAK 583
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
R+ ++ R+ F E G P++ V GV++ ++S G + G+N + G +
Sbjct: 184 RTTTKKPRKVDIFEEEGLNPIQV-----VAGGVHSAVLTSDGQVFMCGIN---EKGTVPA 235
Query: 270 E-VQKSGNTCFFT--PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG 324
E V++ G+T FT P + ++ K MLA+G + AL +G + A+G R+ G +
Sbjct: 236 EGVEREGSTDEFTKIPFSEEIQNEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVD 295
Query: 325 LKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + + E P I + I IA G +D +G L +G G QLG
Sbjct: 296 VHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMGQLGRSSRTK 355
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+ S+ G H L KN + D ++ + +G
Sbjct: 356 TIRSKFMCDESGDHLVVPLRFKNKGK----------FYDVIAKNVFASGFWTIVHGEDGK 405
Query: 444 LYGWGMGNGYQLG 456
Y +G+ N QLG
Sbjct: 406 YYAFGLNNYAQLG 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 153 SMGLKGEGIQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL-GRI 207
++G G K P K++ +++ +G H +LTS G + G E+G +
Sbjct: 178 ALGHPGRTTTKKPRKVDIFEEEGLNPIQVVAGGVHSAVLTSDGQVFMCGINEKGTVPAEG 237
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
+R S + + F E E+ + K + + ++ +GS++A+G N + G
Sbjct: 238 VEREGSTDEFTKIPFSE--EIQNEGKIVMLAAGASFTAALTDQGSVIAWG-NLRNSNGNV 294
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D V + P +I + +K +A+G++H + L+ +G + FG + G+LG
Sbjct: 295 D--VHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMGQLGR-- 350
Query: 328 VSEPVTEPTPIPSLQDKTITS-IACGN-----CVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
S + KTI S C V ++G Y N + +G
Sbjct: 351 ------------SSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVIAKNVF--ASGFW 396
Query: 382 DDILNSEGKIYAFGRHDYGRLGLK 405
+ +GK YAFG ++Y +LG+K
Sbjct: 397 TIVHGEDGKYYAFGLNNYAQLGIK 420
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 220/484 (45%), Gaps = 66/484 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + V L VV V G H++ L DG V+ WG N
Sbjct: 15 GTVWAWGGNALGQLGDGSSDSHSEPV-RVRGLSGVVAVSAGEGHSLALHRDGTVWAWGDN 73
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
ALG+ +G S+ + V +P V +SAGD+HS+AL DG+V+AWG +S
Sbjct: 74 ---ALGQLGDGTSDSHSEPVRVPGLSGVVAVSAGDNHSLALRSDGSVWAWGD-NNSDQLG 129
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G G P +LE +S +V +A+G +H + + + G + G GQLG
Sbjct: 130 GAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGD-------- 181
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTFIS-SKGSILAFGLNNYSQLGEADSE 270
+ L +P + + + V G ++ ++ S GS+ A+G N QLG S
Sbjct: 182 -----GNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISV 236
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ P ++ L + +A+G +SLAL S+G ++A+G +D+G+ G +
Sbjct: 237 GYGA------LPEQVQGL--RGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGST-- 286
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
V + + + ++A G+ S A+ S+G L+ WG QLG+G D
Sbjct: 287 -VYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRV 345
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
L ++G ++ +G + G+L + ++ P P+ + +
Sbjct: 346 QGLSRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTND---SPVPLHVRELSGVV 402
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
++A G S A+ S+G ++ WG QLG+G EP++++G V V++G
Sbjct: 403 AVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLS----GVAAVSAGL 458
Query: 487 QHSV 490
HS+
Sbjct: 459 NHSL 462
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 228/495 (46%), Gaps = 65/495 (13%)
Query: 4 LLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
L + L KQ + S V ++ ++ + G V G +GQLG G V
Sbjct: 185 LTTRWLPKQVQGLSGVVAASAGWAHSMVALSDG-SVWAWGNNTSGQLGNGISVGYGALPE 243
Query: 64 LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KK 121
V+ L V+ V GG++++ L DG ++ WG ND G + +G + ++ +V +
Sbjct: 244 QVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHG---QRGDGSTVYLSSSVRVRWLSG 300
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
V ++AG +HS+A+ DGT++AWG+ + +G +G TP +++ +S +V +A+G
Sbjct: 301 VVAMAAGSAHSLAVRSDGTLWAWGA--NYYGQLGDGTRKDHDTPKRVQGLSRVVAVAAGD 358
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT- 240
H + L + G + T G GQL G + P VPL + + V
Sbjct: 359 GHSIALCADGTVWTWGYNHDGQL------------AHGSTNDSP--VPLHVRELSGVVAV 404
Query: 241 ---GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+++ + S GS+ A+G N QLG D + S P ++ LS ++
Sbjct: 405 AAGALHSLAVLSDGSVWAWGYNRQGQLG--DGSLSSSAE-----PVRVQGLS--GVAAVS 455
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G +HSLA ++G ++A+G + +G+LG S + P + L + +I+ G S
Sbjct: 456 AGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV-PVRVRGL--SGVETISAGFNHSL 512
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYA 393
A S+G L+ WG QLG+G + + ++G ++A
Sbjct: 513 ARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVFAGLNHSLAVRTDGSVWA 572
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G + +G+LG + + P + L + ++A G+ S ++ S+G ++ WG +
Sbjct: 573 WGINSFGQLG-EGTTNTSFAPVRVQGL--SGMETVAAGSLHSLSVGSDGSMWSWGNNHHG 629
Query: 454 QLGNGKEDDILEPMK 468
QLG+G P++
Sbjct: 630 QLGHGLPGRSPTPVR 644
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 223/470 (47%), Gaps = 72/470 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + V L VV V G H++ L DG V+ WG N
Sbjct: 65 GTVWAWGDNALGQLGDGTSDSHSEPV-RVPGLSGVVAVSAGDNHSLALRSDGSVWAWGDN 123
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMG 155
+ LG S +P + + V ++AG +HS+A+ DGTV+AWG +F G
Sbjct: 124 NSDQLGGAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGTVWAWGDNF------AG 177
Query: 156 LKGEG----IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
G+G + P +++ +SG+V ++G H ++ S G++ G GQLG
Sbjct: 178 QLGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAWGNNTSGQLG------ 231
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEA 267
G+S + G +P + + + V G+Y+ + S G++ A+G N++ Q G+
Sbjct: 232 ------NGIS-VGYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGD- 283
Query: 268 DSEVQKSGNTCFFTPHL-IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
G+T + + + ++ LS +A+G HSLA+ S+G ++A+G + YG+LG
Sbjct: 284 -------GSTVYLSSSVRVRWLS--GVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDG 334
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--- 383
+ T P + L + ++A G+ S A+ ++G ++ WG + QL +G +D
Sbjct: 335 TRKDHDT-PKRVQGL--SRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPV 391
Query: 384 ---------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
+ S+G ++A+G + G+LG ++S EP + L
Sbjct: 392 PLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSA-EPVRVQGL-- 448
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIEG 471
+ +++ G S A ++G ++ WG GN + QLG G + L P+++ G
Sbjct: 449 SGVAAVSAGLNHSLARGTDGGVWAWG-GNSFGQLGEGTTSNALVPVRVRG 497
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 207/446 (46%), Gaps = 71/446 (15%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H++ L DG V+ WG N G LG + DS P V V +SAG+ HS+AL DG
Sbjct: 7 HSLALRHDGTVWAWGGNALGQLG-DGSSDSHSEPVRVRGLSGVVAVSAGEGHSLALHRDG 65
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
TV+AWG ++G G+G + P+++ +SG+V +++G +H + L S G++
Sbjct: 66 TVWAWGD-----NALGQLGDGTSDSHSEPVRVPGLSGVVAVSAGDNHSLALRSDGSVWAW 120
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGS 252
G QLG G + VP + + + +V G ++ + + G+
Sbjct: 121 GDNNSDQLG-------------GAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGT 167
Query: 253 ILAFGLNNYSQLGEADSEVQKSGN--TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ A+G N QLG+ GN T + P ++ LS ++G HS+ S+G
Sbjct: 168 VWAWGDNFAGQLGD--------GNILTTRWLPKQVQGLS--GVVAASAGWAHSMVALSDG 217
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++A+G + G+LG P + L + + ++A G S A+ S+G L+ WG
Sbjct: 218 SVWAWGNNTSGQLGNGISVGYGALPEQVQGL--RGVMAVAAGGLYSLALRSDGTLWAWGS 275
Query: 371 GNGYQLGNGK------------------------EDDILNSEGKIYAFGRHDYGRLGLKN 406
+ Q G+G + S+G ++A+G + YG+LG
Sbjct: 276 NDHGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGT 335
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+ T P + L + ++A G+ S A+ ++G ++ WG + QL +G +D P
Sbjct: 336 RKDHDT-PKRVQGL--SRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVIL 492
+ + ++L+ V+ VA+G HS+ +
Sbjct: 393 LHV--RELSG--VVAVAAGALHSLAV 414
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 36/310 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQL G + V +L VV V G +H++ + DG V+ WG N
Sbjct: 368 GTVWTWGYNHDGQLAHG-STNDSPVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYN 426
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+G LG + S P V +SAG +HS+A DG V+AWG S G
Sbjct: 427 RQGQLG-DGSLSSSAEPVRVQGLSGVAAVSAGLNHSLARGTDGGVWAWGG-----NSFGQ 480
Query: 157 KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
GEG P+++ +SG+ I++G +H + S G L G GQLG T ++S
Sbjct: 481 LGEGTTSNALVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSS 540
Query: 214 RNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
R +G+S + VF G+ ++ + + GS+ A+G+N++ QLGE +
Sbjct: 541 VPVRVQGLSGVAA------------VFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTT-- 586
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
NT F P ++ LS + +A+G HSL++ S+G ++++G + +G+LG P
Sbjct: 587 ----NTS-FAPVRVQGLSGME--TVAAGSLHSLSVGSDGSMWSWGNNHHGQLGH---GLP 636
Query: 332 VTEPTPIPSL 341
PTP+ SL
Sbjct: 637 GRSPTPVRSL 646
>gi|189204344|ref|XP_001938507.1| hypothetical protein PTRG_08175 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985606|gb|EDU51094.1| hypothetical protein PTRG_08175 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 558
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 161/336 (47%), Gaps = 38/336 (11%)
Query: 79 MHTVCLTEDGKVYTWG-----CNDEGALGREAEG-----DSEFIPQTVNLPKKAVQISAG 128
++TV TE KV+ +G DE +AE SEF P+ V I+AG
Sbjct: 198 INTVRYTEPLKVFVFGEGGSDSEDETGGLNDAEATPTPVPSEFFPEDTIF----VDIAAG 253
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHFVML 187
DS S AL +G VY WG+FR + G +G +G P+ L+SV ++++ G +H L
Sbjct: 254 DSCSFALTTEGAVYGWGTFRKNEGILGFERGNHTAPRPVYLDSVKKVIQLVCGTNHVYAL 313
Query: 188 TSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
++ G +Q QLG R+T+RS + + + + I + +G Y+
Sbjct: 314 DKDHHVYAWGNGQQNQLGRRVTERSLIQALQPNKIGFHDSSIKKHSQKIAHIASGDYHGL 373
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I+ G I A+G NNY + G + + + P +I SL K T LA+G HH++A
Sbjct: 374 AIAEDGHIWAWGANNYCETGYTAN--AGADDASVLQPKIIHSLEGKNVTELAAGSHHNIA 431
Query: 306 LNSEGKIYAFGRHDYGRLG---------------LKNVSEP--VTEPTPIPSLQDKTITS 348
+ +G++ +GR D + G LKN +P + +PTP+P L+D I +
Sbjct: 432 ITKDGEVLVWGRCDGSQTGLPPSQLEAETDEDKVLKNNGKPKILVQPTPLPGLKD--IVT 489
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
ACG + ID G Y WG YQ G G +DDI
Sbjct: 490 GACGPDHTIVIDKAGKAYSWGFSANYQTGQGTDDDI 525
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 37/171 (21%)
Query: 335 PTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
PTP+PS +D IA G+ SFA+ +EG +YGWG +EG I
Sbjct: 233 PTPVPSEFFPEDTIFVDIAAGDSCSFALTTEGAVYGWGT-------------FRKNEG-I 278
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
F R ++ T P P+ K + + CG +A+D + +Y WG G
Sbjct: 279 LGFERGNH------------TAPRPVYLDSVKKVIQLVCGTNHVYALDKDHHVYAWGNGQ 326
Query: 452 GYQLGNGKED----DILEPMKI----EGKQLNNYTVLQVASGGQHSVILAK 494
QLG + L+P KI + ++ + +ASG H + +A+
Sbjct: 327 QNQLGRRVTERSLIQALQPNKIGFHDSSIKKHSQKIAHIASGDYHGLAIAE 377
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 38/267 (14%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS---EFIPQTVNL--- 118
++ + V+++V G H L +D VY WG + LGR S P +
Sbjct: 294 LDSVKKVIQLVCGTNHVYALDKDHHVYAWGNGQQNQLGRRVTERSLIQALQPNKIGFHDS 353
Query: 119 -----PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH----GSMGLKGEGIQKTPLKLE 169
+K I++GD H +A+ EDG ++AWG+ + G + + P +
Sbjct: 354 SIKKHSQKIAHIASGDYHGLAIAEDGHIWAWGANNYCETGYTANAGADDASVLQ-PKIIH 412
Query: 170 SVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--------RITQRSASRNARRG 219
S+ G + ++A+G+ H + +T G +L G + Q G + +N +
Sbjct: 413 SLEGKNVTELAAGSHHNIAITKDGEVLVWGRCDGSQTGLPPSQLEAETDEDKVLKNNGKP 472
Query: 220 MSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSILAFGLNNYSQLGE-ADSEVQKS 274
++P +P + D+ TG + I G ++G + Q G+ D +++
Sbjct: 473 KILVQPTPLP----GLKDIVTGACGPDHTIVIDKAGKAYSWGFSANYQTGQGTDDDIEVP 528
Query: 275 ---GNTCFFTPHLIKSLSDKKFTMLAS 298
NT L + +++MLAS
Sbjct: 529 TMIDNTAVRETKLTWAGCGGQYSMLAS 555
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 206/461 (44%), Gaps = 68/461 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G+LG G +R V+ L + + G H++ L G+V+ WG N
Sbjct: 167 GTVWAWGSNGAGRLGDG-TTTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGRVWAWGSN 225
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG G +P V A +SAG +HS+ DGT + WG+ +++G +G
Sbjct: 226 SNGQLGDTTAG-YRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGA--NTYGQLGD 282
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P ++ ++G+ + H ++L S G + T G ++GQLG TQ
Sbjct: 283 GTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQ------- 335
Query: 217 RRGMSFLEPGEVPLKRKHIDDVF-----TGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
E VP++ + V +G ++ + + G + +G N QLGE S
Sbjct: 336 -------EQRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSY 388
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
P +L ++ T +A+G++H LA +G ++A+G + G+LG ++
Sbjct: 389 SA-------VPKRSHALVER--TSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQR 439
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+ PT +P L + + ++A G+ S A+ ++G ++ WG QLGNG D N
Sbjct: 440 LL-PTQVPGLTN--MVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSN----- 491
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
PT +P L + SIA G + A+ ++G L+ WG N
Sbjct: 492 ----------------------PTQVPGLTG--VVSIAAGPGHALAVKADGTLWTWGDNN 527
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G D P ++ G V+ VA+G HS+++
Sbjct: 528 TGQLGDGTTVDRPIPTQVPGVT----GVVSVAAGLYHSLVV 564
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 215/487 (44%), Gaps = 67/487 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + T G +TGQLG G V +R V + VV V G H++ + DG V+ WG N
Sbjct: 518 GTLWTWGDNNTGQLGDGTTV-DRPIPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSN 576
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EG LG QT NL V I+AG HS+AL DGTV+AWG + HG +G
Sbjct: 577 YEGQLGGGTTTIRPVPSQTPNL-TGVVAITAGLYHSLALKTDGTVWAWG--YNLHGQLGN 633
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
Q+ P ++ SG V + +G H + + + G++ T G +GQLG T S +
Sbjct: 634 GNTTTQQVPTQVPGFSGGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPT 693
Query: 217 R----RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
+ G+SFL GE ++ + + G+ A+G N+ QLG+ +
Sbjct: 694 QVAGFTGVSFLAAGEF--------------HSVALRTDGTAWAWGSNDKGQLGDGSAR-- 737
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ P L + + + LA+G + A S+G ++A+G + YG+LG +
Sbjct: 738 -----WHYAPTLSRLVGARG---LAAGDRFTAARKSDGTVWAWGDNTYGQLG-DGTTLAT 788
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
P + L D + +A G + +G ++ WG QLG+G
Sbjct: 789 RSPAQVSGLTD--VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPG 846
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
L ++G ++ +G + YG+LG ++ V PT L + S+
Sbjct: 847 LTGVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQRV-APTQAQGL--TVVLSM 903
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
A G A ++G L+ WG QLG G L P + L+ V+ +++ QH
Sbjct: 904 ASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVP--SLSG--VVSLSATHQH 959
Query: 489 SVILAKP 495
S+ L KP
Sbjct: 960 SLAL-KP 965
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 232/511 (45%), Gaps = 67/511 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
K AE S+ V + TL ++ G V G GQLG G + +++ L N
Sbjct: 42 KAAETASRLGLVAAGRHHTLAVRSDG-TVWAWGDNAYGQLGNG-SLQDQRVPVRAWGLWN 99
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
+ V G +H++ + DG V+TWG N+ G LG +G + V +P + V+++AG
Sbjct: 100 ISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLG---DGTTTGRQAPVQVPGLGEVVRVAAG 156
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVML 187
SHS+AL DGTV+AWGS + G +G G Q+ P++++ + I IA+G H + L
Sbjct: 157 FSHSLALKTDGTVWAWGS--NGAGRLG-DGTTTQRLMPVQVQGLPTIKAIAAGNAHSLAL 213
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
G + G GQLG T R + L PG + + G ++ +
Sbjct: 214 DGTGRVWAWGSNSNGQLGDTTA------GYRMLPALVPG-----LTNATGLSAGSNHSLV 262
Query: 248 -SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ G+ +G N Y QLG+ + T P + L+ + A + HSL L
Sbjct: 263 RQADGTTWVWGANTYGQLGDGTT-------TSRSAPQQVSGLAGVDGVLGA--ELHSLVL 313
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV-SFAIDSEGVL 365
S+G ++ +G + G+LG + + P+ + + ++A G+ S A+ + G +
Sbjct: 314 KSDGTVWTWGSNQRGQLGDGTQEQRL---VPVQVMGLSGVVAVAAGSGQHSVAVMANGEV 370
Query: 366 YGWGMGNGYQLGNG--------KEDDIL----------------NSEGKIYAFGRHDYGR 401
+ WG QLG G K L +G ++A+G + G+
Sbjct: 371 WTWGHNVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQ 430
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LG ++ + PT +P L + + ++A G+ S A+ ++G ++ WG QLGNG
Sbjct: 431 LGDGTTAQRLL-PTQVPGLTN--MVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTT 487
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
D P ++ G V+ +A+G H++ +
Sbjct: 488 DRSNPTQVPGLT----GVVSIAAGPGHALAV 514
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 206/450 (45%), Gaps = 59/450 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
+L KT G V T G GQLG G R T V V + G H+V L DG
Sbjct: 661 SLAIKTDG-SVWTWGYNYRGQLGDG-TTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDG 718
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ND+G LG + + P T++ A ++AGD + A DGTV+AWG
Sbjct: 719 TAWAWGSNDKGQLG-DGSARWHYAP-TLSRLVGARGLAAGDRFTAARKSDGTVWAWGD-- 774
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+++G +G ++P ++ ++ + +A+G H V++ G + T G +GQLG T
Sbjct: 775 NTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGT 834
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
RR L P +VP + ++ + + G++ +G N Y QLG+
Sbjct: 835 ------TTRR----LVPTQVPGLTGVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGT 884
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ T P + L+ +ASG +H LA ++G ++A+G + +G+LG+
Sbjct: 885 T-------TQRVAPTQAQGLT--VVLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTT 935
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
+ + PT +PSL + S++ + S A+ +G ++ WG + QLG+G
Sbjct: 936 TTRL-APTLVPSLSG--VVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTT----- 987
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
RH PT PSL ++ +++ G S A+ ++G ++ WG
Sbjct: 988 -------RH---------------VPTQAPSL--SSVKAVSAGFEYSLAVKADGTVWSWG 1023
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
+ + QLG+G P ++ G LN+ T
Sbjct: 1024 INDRGQLGSGTATPRATPTQVAG--LNSVT 1051
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 209/483 (43%), Gaps = 62/483 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G GQLG G R V L V V+ +H++ L DG V+TWG N
Sbjct: 267 GTTWVWGANTYGQLGDG-TTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSN 325
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGD-SHSVALLEDGTVYAWGSFRDSHGSMG 155
G LG + + +P V V ++AG HSVA++ +G V+ WG + G +G
Sbjct: 326 QRGQLGDGTQ-EQRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWG--HNVEGQLG 382
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
P + ++ +A+G H + G + G +GQLG T
Sbjct: 383 EGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGT------T 436
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
A+R L P +VP ++ V G +++ + + G++ A+G N QLG S +S
Sbjct: 437 AQR----LLPTQVP-GLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNG-STTDRS 490
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-LKNVSEPVT 333
T P L +S +A+G H+LA+ ++G ++ +G ++ G+LG V P+
Sbjct: 491 NPTQV--PGLTGVVS------IAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPI- 541
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK------------- 380
PT +P + + S+A G S + +G ++ WG QLG G
Sbjct: 542 -PTQVPGVTG--VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNL 598
Query: 381 -----------EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
L ++G ++A+G + +G+LG N + PT +P S+
Sbjct: 599 TGVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQV-PTQVPGFSGG--VSLG 655
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S AI ++G ++ WG QLG+G P ++ G ++ +A+G HS
Sbjct: 656 AGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF----LAAGEFHS 711
Query: 490 VIL 492
V L
Sbjct: 712 VAL 714
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 201/469 (42%), Gaps = 69/469 (14%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
PD E T E + V G HT+ + DG V+ WG N G LG + D
Sbjct: 35 PD--ELATAKAAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPV 92
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
+ L + + AGD HS+A+ DGTV+ WG ++ G +G ++ P+++ +
Sbjct: 93 RAWGLWNISA-VGAGDLHSLAMKSDGTVWTWGG--NNFGQLGDGTTTGRQAPVQVPGLGE 149
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLK 231
+V++A+G H + L + G + G G+L G TQR L P +V
Sbjct: 150 VVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQR------------LMPVQVQ-G 196
Query: 232 RKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
I + G ++ + G + A+G N+ QLG+ + + P L+ L++
Sbjct: 197 LPTIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYR-------MLPALVPGLTN 249
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
T L++G +HSL ++G + +G + YG+LG + + P + L + +
Sbjct: 250 A--TGLSAGSNHSLVRQADGTTWVWGANTYGQLG-DGTTTSRSAPQQVSGLAG--VDGVL 304
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------- 385
S + S+G ++ WG QLG+G ++ L
Sbjct: 305 GAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAV 364
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI--TSIACGNCVSFAIDSEGV 443
+ G+++ +G + G+LG E + + +P + TS+A G A +G
Sbjct: 365 MANGEVWTWGHNVEGQLG-----EGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGT 419
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
++ WG QLG+G L P ++ G L N ++ VA+G S+ L
Sbjct: 420 VWAWGDNAKGQLGDGTTAQRLLPTQVPG--LTN--MVAVAAGHHSSLAL 464
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 22/247 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ GQLG G +R + L V+ + G H + DG ++ WG N
Sbjct: 867 GTVWGWGENIYGQLGDG-TTTQRVAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYN 925
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + P V V +SA HS+AL DGTV+AWG +S+G +G
Sbjct: 926 AHGQLGIGTT-TTRLAPTLVPSLSGVVSLSATHQHSLALKPDGTVWAWG--YNSNGQLGD 982
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P + S+S + +++G ++ + + + G + + G ++GQLG T
Sbjct: 983 GTTTTRHVPTQAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTA------- 1035
Query: 217 RRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
P P + ++ V + +S+ G++ FG N QLG D+ ++
Sbjct: 1036 -------TPRATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLIR 1088
Query: 273 KSGNTCF 279
+ N +
Sbjct: 1089 LAPNQVW 1095
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 224/487 (45%), Gaps = 69/487 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +G+LG G +R T V L V E+ GG H++ L DG WG N
Sbjct: 264 GTVRAWGYNASGRLGDG-TTTQRATPVAVPGLTGVTEISAGGGHSLALLADGTARAWGSN 322
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + P V+ +SAG +HS+ALL DGT AWG+ + G +G
Sbjct: 323 VSGQLG-DGTVSNRTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGA--NVSGQLG- 378
Query: 157 KGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSAS 213
G Q+T P+ L ++G+ +A+G H + + + G + G GQL G QR+A
Sbjct: 379 DGTTTQRTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTA- 437
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS--SKGSILAFGLNNYSQLGEADSEV 271
P VP + T Y+ ++ S G++ A+G N QLG D
Sbjct: 438 -----------PVVVPALTGVVS--LTAGYDHSLALLSDGTVRAWGNNASGQLG--DGTT 482
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQ-HHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ G TP + L++ L+ G+ +H+LAL S+G + A+G + G+LG + S
Sbjct: 483 NQRG-----TPVQVSGLTN--VVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSN 535
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG------------------- 371
T P + L + + +IA G S A+ S G + WG G
Sbjct: 536 RWT-PVAVSGLTN--VVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAV 592
Query: 372 ----NGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
N + G + L ++G +YA+GR+D+G+LG + T P +P L + +
Sbjct: 593 PGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNT-PVQVPGLTN--VV 649
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE-PMKIEGKQLNNYTVLQVASG 485
+IA G S A+ ++G +Y WG QLG+G + + P + G L N V+ V +G
Sbjct: 650 AIATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPG--LTN--VVAVTAG 705
Query: 486 GQHSVIL 492
G S+ L
Sbjct: 706 GNQSLAL 712
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 221/486 (45%), Gaps = 64/486 (13%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G GQLG G R + V L VV + G H + L DG V WG
Sbjct: 112 GDGTVRAWGNNTYGQLGDG-TTPHRASPGAVPGLSGVVAIAAGNNHALALLSDGTVRAWG 170
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG + P V V I+AG++HS+A+L DGTV AWG+ +++G +
Sbjct: 171 YNAYGQLG-DGTTTQRRTPVAVLGLTGVVAIAAGENHSLAVLADGTVRAWGN--NTYGRL 227
Query: 155 GLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRS 211
G G Q+T P+ + S++G+ IA+GA+H + + + G + G G+L G TQR+
Sbjct: 228 G-DGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRA 286
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
P VP + G ++ + + G+ A+G N QLG+
Sbjct: 287 ------------TPVAVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSN 334
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+ S P L+ SL+ T L++G +HSLAL ++G A+G + G+LG ++
Sbjct: 335 RTS-------PVLVSSLT--GVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQR 385
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
T P +P L + ++A G S A+ + G + WG QLG+G
Sbjct: 386 -TLPVGLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVP 442
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L S+G + A+G + G+LG ++ TP+ + +
Sbjct: 443 ALTGVVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQ---RGTPVQVSGLTNVVA 499
Query: 428 IACGNCV-SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
++ G + A+ S+G + WG QLG+G + P+ + G L N V+ +A+GG
Sbjct: 500 LSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSG--LTN--VVAIAAGG 555
Query: 487 QHSVIL 492
+S+ L
Sbjct: 556 DYSLAL 561
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 207/479 (43%), Gaps = 91/479 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G +GQLG G V R + LV L V + GG H++ L DG WG N
Sbjct: 314 GTARAWGSNVSGQLGDG-TVSNRTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGAN 372
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG +G + V LP ++AG HS+A+L +GTV AWG +++G +
Sbjct: 373 VSGQLG---DGTTTQRTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWG--HNTYGQL 427
Query: 155 GLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT----- 208
G G Q+T P+ + +++G+V + +G DH + L S G + G GQLG T
Sbjct: 428 G-DGSTAQRTAPVVVPALTGVVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRG 486
Query: 209 ---QRSASRNA--------RRGMSFLEPGEV---------------------PLKRKHID 236
Q S N ++ L G V P+ +
Sbjct: 487 TPVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLT 546
Query: 237 DVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+V G Y+ + S G++ ++G Y LG + +T TP + +++
Sbjct: 547 NVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLG-------RDYDTYSPTPKAVPGVTN-- 597
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G +H LAL ++G +YA+GR+D+G+LG + T P +P L + + +IA G
Sbjct: 598 VVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNT-PVQVPGLTN--VVAIATG 654
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
S A+ ++G +Y WG QLG+G + +
Sbjct: 655 WDHSLALRADGTVYAWGYNYARQLGDGSTANYRQT------------------------- 689
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P P+P L + + ++ G S A+ S G ++ WG + +LGNG P+ + G
Sbjct: 690 -PAPVPGLTN--VVAVTAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLTPPAPVAVTG 745
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 224/486 (46%), Gaps = 68/486 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R + V L V V GG +++ L DG V WG N
Sbjct: 64 GTVRAWGDNASGQLGDG-TTTQRSSPTAVPGLAGAVAVSAGGEYSLALLGDGTVRAWGNN 122
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + P V V I+AG++H++ALL DGTV AWG +++G +G
Sbjct: 123 TYGQLG-DGTTPHRASPGAVPGLSGVVAIAAGNNHALALLSDGTVRAWG--YNAYGQLGD 179
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSAS- 213
++TP+ + ++G+V IA+G +H + + + G + G G+L G TQR++
Sbjct: 180 GTTTQRRTPVAVLGLTGVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPV 239
Query: 214 -RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
++ G++ + G H V + G++ A+G N +LG+ +
Sbjct: 240 LVSSLTGVTAIAAGA-----NHSLAVL---------ADGTVRAWGYNASGRLGDGTT--- 282
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
T TP + L+ T +++G HSLAL ++G A+G + G+LG VS
Sbjct: 283 ----TQRATPVAVPGLT--GVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNR- 335
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
T P + SL +T+++ G S A+ ++G WG QLG+G
Sbjct: 336 TSPVLVSSLTG--VTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPG 393
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
+ + G + A+G + YG+LG + ++ T P +P+L + S+
Sbjct: 394 LTGVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQR-TAPVVVPALTG--VVSL 450
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ- 487
G S A+ S+G + WG QLG+G + P+++ G L N L SGG+
Sbjct: 451 TAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSG--LTNVVAL---SGGKL 505
Query: 488 -HSVIL 492
H++ L
Sbjct: 506 YHALAL 511
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 198/448 (44%), Gaps = 60/448 (13%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
V + G H++ T DG V WG N G LG + P V AV +SAG
Sbjct: 47 AVRLASGKAHSLLATPDGTVRAWGDNASGQLG-DGTTTQRSSPTAVPGLAGAVAVSAGGE 105
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
+S+ALL DGTV AWG+ +++G +G + +P + +SG+V IA+G +H + L S
Sbjct: 106 YSLALLGDGTVRAWGN--NTYGQLGDGTTPHRASPGAVPGLSGVVAIAAGNNHALALLSD 163
Query: 191 GNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
G + G GQL G TQR R + + H V
Sbjct: 164 GTVRAWGYNAYGQLGDGTTTQR---RTPVAVLGLTGVVAIAAGENHSLAVL--------- 211
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G++ A+G N Y +LG+ + + S P L+ SL+ T +A+G +HSLA+ +
Sbjct: 212 ADGTVRAWGNNTYGRLGDGTTTQRTS-------PVLVSSLT--GVTAIAAGANHSLAVLA 262
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G + A+G + GRLG ++ T P +P L +T I+ G S A+ ++G W
Sbjct: 263 DGTVRAWGYNASGRLGDGTTTQRAT-PVAVPGLTG--VTEISAGGGHSLALLADGTARAW 319
Query: 369 GMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGL 404
G QLG+G + L ++G A+G + G+LG
Sbjct: 320 GSNVSGQLGDGTVSNRTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGANVSGQLGD 379
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
++ T P +P L + ++A G S A+ + G + WG QLG+G
Sbjct: 380 GTTTQR-TLPVGLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRT 436
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+ + V+ + +G HS+ L
Sbjct: 437 APVVVPALT----GVVSLTAGYDHSLAL 460
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 181/397 (45%), Gaps = 57/397 (14%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
+AV++++G +HS+ DGTV AWG ++ G +G + +P + ++G V +++G
Sbjct: 46 RAVRLASGKAHSLLATPDGTVRAWGD--NASGQLGDGTTTQRSSPTAVPGLAGAVAVSAG 103
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
++ + L G + G GQLG T AS PG VP +
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRAS-----------PGAVPGLSGVVAIAA 152
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+ + S G++ A+G N Y QLG+ + ++ TP + L+ +A+G
Sbjct: 153 GNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRR-------TPVAVLGLT--GVVAIAAG 203
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
++HSLA+ ++G + A+G + YGRLG ++ T P + SL +T+IA G S A+
Sbjct: 204 ENHSLAVLADGTVRAWGNNTYGRLGDGTTTQR-TSPVLVSSLTG--VTAIAAGANHSLAV 260
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFG 395
++G + WG +LG+G L ++G A+G
Sbjct: 261 LADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTGVTEISAGGGHSLALLADGTARAWG 320
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ G+LG VS T P + SL +T+++ G S A+ ++G WG QL
Sbjct: 321 SNVSGQLGDGTVSNR-TSPVLVSSLTG--VTALSAGGNHSLALLADGTARAWGANVSGQL 377
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G+G P+ + G V +A+GG HS+ +
Sbjct: 378 GDGTTTQRTLPVGLPGLT----GVAALAAGGYHSLAV 410
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ D GQLG G V +R T V L NVV + G H++ L DG VY WG N
Sbjct: 615 GTVYAWGRNDFGQLGDGTTV-QRNTPVQVPGLTNVVAIATGWDHSLALRADGTVYAWGYN 673
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
LG + + P V V ++AG + S+ALL G V+AWG +SHG +
Sbjct: 674 YARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGNQSLALLSSGAVHAWGD--NSHGEL-- 729
Query: 157 KGEGIQKTPLKLESVSGI 174
G G TP +V+G+
Sbjct: 730 -GNGSTLTPPAPVAVTGL 746
>gi|341877072|gb|EGT33007.1| hypothetical protein CAEBREN_03638 [Caenorhabditis brenneri]
Length = 592
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 191/384 (49%), Gaps = 39/384 (10%)
Query: 36 GGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+CG+G+ G G RK E+ N ++VV GG+H+ LT DG+V+ G
Sbjct: 174 GDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLNPIQVVAGGVHSAVLTSDGQVFMCG 233
Query: 95 CNDEG---ALGREAEGDS-EF--IP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
N++G A G E EG + EF IP + + K V ++AG S + AL + G+V AWG+
Sbjct: 234 INEKGTVPAEGVEREGSTDEFTKIPFSEEIQNEGKIVMLAAGASFTAALTDQGSVIAWGN 293
Query: 147 FRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R+S+G++ + +Q+ P+ + ++ IVKIA+G +H VML +G LLT G E G
Sbjct: 294 LRNSNGNVDVHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMG 353
Query: 203 QLGRITQRSASRNARRGMSFLEPGE---VPLKRKH--------IDDVF-TGVYNTFISSK 250
QLGR S ++ R E G+ VPL+ K+ +VF +G +
Sbjct: 354 QLGR---SSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVIAKNVFASGFWTIVHGED 410
Query: 251 GSILAFGLNNYSQLG----EAD--SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
G AFGLNNY+QLG EAD + Q + F P + ++ + G H +
Sbjct: 411 GKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAEETFVNIEGVQHVV 470
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAI 359
L+ GK++A G++ LGL N + + + +LQ D I ++ S A
Sbjct: 471 LLDGAGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTLQEINFDSKIVGVSAKLATSIAW 530
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+G Y WG QLG G +DD
Sbjct: 531 SEDGTAYAWGFDTTGQLGLGLKDD 554
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 176/412 (42%), Gaps = 72/412 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEG----IQKTPL--KLESVSGIV 175
+Q+ AG HS L DG V+ G + + + + G++ EG K P ++++ IV
Sbjct: 211 IQVVAGGVHSAVLTSDGQVFMCGINEKGTVPAEGVEREGSTDEFTKIPFSEEIQNEGKIV 270
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL----- 230
+A+GA LT +G+++ G R+++ N + E P+
Sbjct: 271 MLAAGASFTAALTDQGSVIAWG----------NLRNSNGNVDVHPLLHKMQEKPVVIVHQ 320
Query: 231 -KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFT-PHLIKS 287
KRK + + + KG +L FG QLG + ++ +S C + HL+
Sbjct: 321 AKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMGQLGRSSRTKTIRSKFMCDESGDHLVVP 380
Query: 288 LSDK---KF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
L K KF + ASG ++ +GK YAFG ++Y +LG+K V E
Sbjct: 381 LRFKNKGKFYDVIAKNVFASG-FWTIVHGEDGKYYAFGLNNYAQLGIK-----VDEADVG 434
Query: 339 PSLQDKTITSI-------ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
QD + A G +F ++ EGV + +L+ GK+
Sbjct: 435 QDGQDNRELRVFLPAEAPAFGAEETF-VNIEGVQHVV---------------LLDGAGKV 478
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAIDSEGVLYG 446
+A G++ LGL N + + + +LQ D I ++ S A +G Y
Sbjct: 479 FAMGKNTDNALGLGNWTGKDDQQHWLYDTLQEINFDSKIVGVSAKLATSIAWSEDGTAYA 538
Query: 447 WGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
WG QLG G +DD + +P +I L +++++ + QH++ILAK
Sbjct: 539 WGFDTTGQLGLGLKDDDDKMVGKPEEISSAHLEDHSIIGASISDQHTLILAK 590
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
R+ ++ R+ F E G P++ V GV++ ++S G + G+N + G +
Sbjct: 191 RTTTKKPRKVDIFEEEGLNPIQV-----VAGGVHSAVLTSDGQVFMCGIN---EKGTVPA 242
Query: 270 E-VQKSGNTCFFT--PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG 324
E V++ G+T FT P + ++ K MLA+G + AL +G + A+G R+ G +
Sbjct: 243 EGVEREGSTDEFTKIPFSEEIQNEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVD 302
Query: 325 LKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + + E P I + I IA G +D +G L +G G QLG
Sbjct: 303 VHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMGQLGRSSRTK 362
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+ S+ G H L KN + D ++ + +G
Sbjct: 363 TIRSKFMCDESGDHLVVPLRFKNKGK----------FYDVIAKNVFASGFWTIVHGEDGK 412
Query: 444 LYGWGMGNGYQLG 456
Y +G+ N QLG
Sbjct: 413 YYAFGLNNYAQLG 425
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 153 SMGLKGEGIQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL-GRI 207
++G G K P K++ +++ +G H +LTS G + G E+G +
Sbjct: 185 ALGHPGRTTTKKPRKVDIFEEEGLNPIQVVAGGVHSAVLTSDGQVFMCGINEKGTVPAEG 244
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
+R S + + F E E+ + K + + ++ +GS++A+G N + G
Sbjct: 245 VEREGSTDEFTKIPFSE--EIQNEGKIVMLAAGASFTAALTDQGSVIAWG-NLRNSNGNV 301
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D V + P +I + +K +A+G++H + L+ +G + FG + G+LG
Sbjct: 302 D--VHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGGLLTFGDGEMGQLGR-- 357
Query: 328 VSEPVTEPTPIPSLQDKTITS-IACGN-----CVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
S + KTI S C V ++G Y N + +G
Sbjct: 358 ------------SSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVIAKNVF--ASGFW 403
Query: 382 DDILNSEGKIYAFGRHDYGRLGLK 405
+ +GK YAFG ++Y +LG+K
Sbjct: 404 TIVHGEDGKYYAFGLNNYAQLGIK 427
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 180/377 (47%), Gaps = 32/377 (8%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P ++V + S G VV + G+G+ GQLG G D +R + LD +V
Sbjct: 13 PPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHG-DTDDRLLPTQLSALDAQQIVS 71
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDS 130
VV G HT+ +E +VY+WG D G LG D FIPQ + + + QI+ GDS
Sbjct: 72 VVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDL-FIPQPIRALQGLRIKQIACGDS 130
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
H +A+ +G V +WG R+ +G +GL P K+++ G I +A+GA+H V +T
Sbjct: 131 HCLAVTMEGEVQSWG--RNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAIT 188
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-I 247
G L G G LG RN R P +V + + V G +T +
Sbjct: 189 ENGELYGWGWGRYGNLGL-----GDRNDR-----CIPEKVSVDCDKMVLVACGWRHTISV 238
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS G + +G + Y QLG D + PH +++ SDK ++ G H++AL
Sbjct: 239 SSSGELYTYGWSKYGQLGHGDCKDH-------LVPHKLQAFSDKLICQVSGGWRHTMALT 291
Query: 308 SEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ G++Y +G + +G++G+ NV P + D+ + I+CG + A+ + +Y
Sbjct: 292 TGGQLYGWGWNKFGQVGVGDNVDR--CSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVY 349
Query: 367 GWGMGNGYQLGNGKEDD 383
WG G QLG G D
Sbjct: 350 SWGRGTNGQLGIGDTID 366
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 49/349 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKR 232
++ I++G H V L S + + G E GQLG + R L P ++ L
Sbjct: 17 VLLISAGGSHSVALISGNVVCSWGRGEDGQLGH-----GDTDDR-----LLPTQLSALDA 66
Query: 233 KHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ I V G +T + SK + ++G ++ +LG +S + F P I++L
Sbjct: 67 QQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNS-------SDLFIPQPIRALQG 119
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ +A G H LA+ EG++ ++GR+ G+LGL + + P I + Q I +A
Sbjct: 120 LRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGVPIKMVA 178
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------------IL 385
G S AI G LYGWG G LG G +D +
Sbjct: 179 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISV 238
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+S G++Y +G YG+LG + + + P + + DK I ++ G + A+ + G LY
Sbjct: 239 SSSGELYTYGWSKYGQLGHGDCKDHLV-PHKLQAFSDKLICQVSGGWRHTMALTTGGQLY 297
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
GWG Q+G G D P+++ K ++ V Q++ G +H++ + +
Sbjct: 298 GWGWNKFGQVGVGDNVDRCSPVQV--KFPHDQKVAQISCGWRHTIAVTE 344
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 169/399 (42%), Gaps = 56/399 (14%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
P++ + ISAG SHSVAL+ V +WG D G + + T L IV +
Sbjct: 14 PRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVV 73
Query: 179 SGADHFVMLT-SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
GADH + + S+ + + G G GR+ ++S F+ L+ I
Sbjct: 74 CGADHTLAYSESKVEVYSWG---WGDFGRLGHGNSSD------LFIPQPIRALQGLRIKQ 124
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G + ++ +G + ++G N QLG +E P I++ M+
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDS-------LVPQKIQTFQGVPIKMV 177
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A+G HS+A+ G++Y +G YG LGL + ++ P + DK + +ACG +
Sbjct: 178 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCI-PEKVSVDCDKMVL-VACGWRHT 235
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGK 390
++ S G LY +G QLG+G D L + G+
Sbjct: 236 ISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQ 295
Query: 391 IYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
+Y +G + +G++G+ NV P + D+ + I+CG + A+ + +Y WG
Sbjct: 296 LYGWGWNKFGQVGVGDNVDR--CSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGR 353
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
G QLG G D P IE ++ S GQH
Sbjct: 354 GTNGQLGIGDTIDWNYPKIIEALSVD-------GSCGQH 385
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
++ ++++G HS+AL S + ++GR + G+LG + + + PT + +L + I S+
Sbjct: 15 RRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLL-PTQLSALDAQQIVSVV 73
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A V ++Y++G D+GRLG N S+
Sbjct: 74 CGADHTLAYSESKV-------------------------EVYSWGWGDFGRLGHGNSSDL 108
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P PI +LQ I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 109 FI-PQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 167
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
Q + VA+G +HSV + +
Sbjct: 168 TFQ--GVPIKMVAAGAEHSVAITE 189
>gi|1710046|sp|P52499.1|RCC1_CANAL RecName: Full=Protein RCC1
gi|1237185|emb|CAA65595.1| RCC1 [Candida albicans]
Length = 464
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 182/404 (45%), Gaps = 60/404 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 26 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 85
Query: 90 VYTWGCNDEGALGREA--------------------------EGDSEFIPQTV-NLPK-K 121
+++WG ND LGR+ ++E P V NLP+ +
Sbjct: 86 IWSWGGNDSEVLGRDTCQAKEVLKDIDGKNGNDDDDDDEDGDLNEAESTPALVENLPEGE 145
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIAS 179
VQ++A D+ S ALL +G VY+WG FR + G +G + I QKTPLK++ + I
Sbjct: 146 IVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKKHCPIMR 205
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
++ + +Q QLGR I +R R+ LEP + L +I +
Sbjct: 206 SVKIILLALDSKEWMPGVNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIKYI 256
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G ++ F I ++ A+GLN Y Q + + P LI LS K +A
Sbjct: 257 ASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKEIA 316
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT----------EPTPIPSLQDKTIT 347
+G+HH+LAL +G++YA+GR+D +G+ P + + + +L I
Sbjct: 317 AGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFAVKIK 376
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 377 TIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 420
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG-LKNVSEPVTEPTP 337
TP L+++L + + LA+ + S AL S G +Y++G R + G LG L++ + P
Sbjct: 134 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQKTPLK 193
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------- 383
I L+ K + + A+DS+ + G G YQLG +
Sbjct: 194 IKELK-KHCPIMRSVKIILLALDSKEWMPGVN-GQQYQLGRRILERHRYRSLEPQQFGLY 251
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQDKT 424
++ +YA+G + YG+ L + + +PT IP L K
Sbjct: 252 NIKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKG 311
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
I IA G + A+ +G +Y WG + ++G K+ KI +++ LQ
Sbjct: 312 IKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQ 368
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 2 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 60
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 115
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +K +A+GA+H
Sbjct: 116 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 173
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+T G+L G G LG R+ + MS + G
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW----------- 222
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +S G++ +G + Y QLG D E PH +++LS+ + ++
Sbjct: 223 ---RHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISG 272
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A
Sbjct: 273 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLA 331
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG G+ D
Sbjct: 332 VTERNNVFAWGRGTNGQLGIGESVD 356
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 177/390 (45%), Gaps = 59/390 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 3 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 60
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-- 234
+ GADH V + G + G GR+ ++S P +P+K H
Sbjct: 61 VTCGADHTVAYSQSG--MEVYSWGWGDFGRLGHGNSS-------DLFTP--LPIKALHGI 109
Query: 235 -IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G + ++ +G + ++G N QLG D+E P I++ +
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGIR 162
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +ACG
Sbjct: 163 IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACG 221
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
+ ++ G LY +G QLG+G +D L
Sbjct: 222 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT 281
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 282 SDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 340
Query: 447 WGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 341 WGRGTNGQLGIGESVDRNFPKIIEALSVDG 370
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 62
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G+ ++Y++G D+GRLG N S+
Sbjct: 63 CGADHTVAYSQSGM-------------------------EVYSWGWGDFGRLGHGNSSDL 97
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 98 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 156
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 157 A--FEGIRIKMVAAGAEHTAAVTE 178
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G + T G GQLG G D+ + +E L N + ++ G HT+ LT DGK+Y WG
Sbjct: 232 GALYTYGWSKYGQLGHG-DLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 290
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G +G D + P V P +K VQ+S G H++A+ E V+AWG R ++G
Sbjct: 291 WNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG--RGTNG 347
Query: 153 SMGLKGEGIQKT-PLKLESVS 172
+G+ GE + + P +E++S
Sbjct: 348 QLGI-GESVDRNFPKIIEALS 367
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 71
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 126
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +K +A+GA+H
Sbjct: 127 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHT 184
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+T G+L G G LG R+ + MS + G
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW----------- 233
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +S G++ +G + Y QLG D E PH +++LS+ + ++
Sbjct: 234 ---RHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISG 283
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A
Sbjct: 284 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLA 342
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG G+ D
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVD 367
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 178/391 (45%), Gaps = 61/391 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 71
Query: 177 IASGADHFVMLTSRG-NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH- 234
+ GADH V + G + + G G GR+ ++S P +P+K H
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGW---GDFGRLGHGNSS-------DLFTP--LPIKALHG 119
Query: 235 --IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ +G + ++G N QLG D+E P I++
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGI 172
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +AC
Sbjct: 173 PIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVAC 231
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + ++ G LY +G QLG+G +D L
Sbjct: 232 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 446 GWGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 351 AWGRGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 73
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G+ ++Y++G D+GRLG N S+
Sbjct: 74 CGADHTVAYSQSGM-------------------------EVYSWGWGDFGRLGHGNSSDL 108
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 109 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 168 A--FEGIPIKMVAAGAEHTAAVTE 189
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G + T G GQLG G D+ + +E L N + ++ G HT+ LT DGK+Y WG
Sbjct: 243 GALYTYGWSKYGQLGHG-DLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G +G D + P V P +K VQ+S G H++A+ E V+AWG R ++G
Sbjct: 302 WNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG--RGTNG 358
Query: 153 SMGLKGEGIQKT-PLKLESVS 172
+G+ GE + + P +E++S
Sbjct: 359 QLGI-GESVDRNFPKIIEALS 378
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 37 GVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G+ GQLGLG D + + E + + V G HT +TEDG +Y WG
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIP-IKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D +P+ V +K ++ G H++++ G +Y +G + +G
Sbjct: 198 WGRYGNLGLGDRTD-RLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK--YG 254
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G P KLE++S I +I+ G H + LTS G L G + GQ+G
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG----- 309
Query: 211 SASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ P +V + + V G +T ++ + ++ A+G QLG
Sbjct: 310 -----VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG--- 361
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ +S + F P +I++LS ASGQH
Sbjct: 362 --IGESVDRNF--PKIIEALSVDG----ASGQH 386
>gi|154297017|ref|XP_001548937.1| hypothetical protein BC1G_12597 [Botryotinia fuckeliana B05.10]
Length = 587
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 181/412 (43%), Gaps = 80/412 (19%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVED------LDNVVEVVVGGMHTVCLTEDGKVYT 92
V G G+ +LGLG + + K V L V +V VGGMH V LT+D ++ T
Sbjct: 151 VYVFGSGENNELGLGANKINGKAPTNVMRPRYNPLLKGVTQVAVGGMHCVALTDDQRILT 210
Query: 93 WGCNDEGALGR------------EAEGDSEFIPQTVNLP---------------KKAVQI 125
WG +D G+LGR +A+ DSE V P +K Q+
Sbjct: 211 WGVSDGGSLGRDTSSYEAPAKDVDADSDSEDEEDIVLNPLESTPTAISTEFLDGRKVAQV 270
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-----------------IQKTPLKL 168
A DS S L EDG VY WGSF + G +G EG IQ P+ +
Sbjct: 271 IACDSSSFVLTEDGYVYGWGSFVGNDGIIGFTAEGASMAAKERDGDLKKKFQIQAEPMLI 330
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
+ I +A G++H + L ++G + T G EQ QLGR N R + L P +
Sbjct: 331 PGLKNIKSLARGSNHVMALDNKGTVFTWGACEQNQLGRRV------NNRFKFAALTPTPI 384
Query: 229 PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIK 286
K K I G +++F I++KG +L++GLNNY Q G A + G+ F P ++K
Sbjct: 385 LKKCKSIAG---GSFHSFAINTKGQVLSWGLNNYGQTGIASNA---GGDDAFIHNPTVVK 438
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS--------EPVTEPTPI 338
+ H++A + ++ GR D G+ GL S P T I
Sbjct: 439 GFEGFDVKQIKGCFQHTIACTEKQEVLVVGRCDEGQTGLDLTSVDQDTVIVSPTTSKPAI 498
Query: 339 PSLQDKTITSIACGNCVSFAIDS------EGVLYGWGMGNGYQLGNGKEDDI 384
L+ T+ V+ AID+ +G ++ WG G Y++G G +D +
Sbjct: 499 --LKALTVVPGVKATFVAGAIDNSIVLTEDGKVWAWGYGENYRIGLGSDDTV 548
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 186/479 (38%), Gaps = 82/479 (17%)
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP------ 119
E L ++ +G + TE VY +G + LG A + P V P
Sbjct: 127 ESLPVAKKLKIGASINIPPTERLDVYVFGSGENNELGLGANKINGKAPTNVMRPRYNPLL 186
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
K Q++ G H VAL +D + WG GS+G + +++ S S
Sbjct: 187 KGVTQVAVGGMHCVALTDDQRILTWGV--SDGGSLGRDTSSYEAPAKDVDADSD-----S 239
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
+ ++L + TA E ++ Q A ++ SF+ +D +
Sbjct: 240 EDEEDIVLNPLESTPTAISTEFLDGRKVAQVIACDSS----SFV----------LTEDGY 285
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +F+ + G I+ F S E D +++K P LI L K LA
Sbjct: 286 VYGWGSFVGNDG-IIGFTAEGASMAAKERDGDLKKKFQ-IQAEPMLIPGL--KNIKSLAR 341
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G +H +AL+++G ++ +G + +LG + N TP P L K SIA G+ SF
Sbjct: 342 GSNHVMALDNKGTVFTWGACEQNQLGRRVNNRFKFAALTPTPIL--KKCKSIAGGSFHSF 399
Query: 358 AIDSEGVLYGWGMGNGYQLG---NGKEDDIL----------------------------N 386
AI+++G + WG+ N Q G N DD
Sbjct: 400 AINTKGQVLSWGLNNYGQTGIASNAGGDDAFIHNPTVVKGFEGFDVKQIKGCFQHTIACT 459
Query: 387 SEGKIYAFGRHDYGRLGLKNVS--------EPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ ++ GR D G+ GL S P T I L+ T+ V+ AI
Sbjct: 460 EKQEVLVVGRCDEGQTGLDLTSVDQDTVIVSPTTSKPAI--LKALTVVPGVKATFVAGAI 517
Query: 439 DS------EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
D+ +G ++ WG G Y++G G +D + P IE + + GGQ SVI
Sbjct: 518 DNSIVLTEDGKVWAWGYGENYRIGLGSDDTVRTPTLIENSAIKGKKITFAGCGGQFSVI 576
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 71
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 126
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +K +A+GA+H
Sbjct: 127 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 184
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+T G+L G G LG R+ + MS + G
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW----------- 233
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +S G++ +G + Y QLG D E PH +++LS+ + ++
Sbjct: 234 ---RHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISG 283
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A
Sbjct: 284 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLA 342
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG G+ D
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVD 367
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 179/391 (45%), Gaps = 61/391 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 71
Query: 177 IASGADHFVMLTSRG-NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH- 234
+ GADH V + G + + G G GR+ ++S P +P+K H
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGW---GDFGRLGHGNSS-------DLFTP--LPIKALHG 119
Query: 235 --IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ +G + ++G N QLG D+E P I++
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGI 172
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +AC
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVAC 231
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + ++ G LY +G QLG+G +D L
Sbjct: 232 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 446 GWGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 351 AWGRGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 73
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G+ ++Y++G D+GRLG N S+
Sbjct: 74 CGADHTVAYSQSGM-------------------------EVYSWGWGDFGRLGHGNSSDL 108
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 109 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTE 189
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 37 GVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G+ GQLGLG D + + E + + V G HT +TEDG +Y WG
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D +P+ V +K ++ G H++++ G +Y +G + +G
Sbjct: 198 WGRYGNLGLGDRTD-RLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK--YG 254
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G P KLE++S I +I+ G H + LTS G L G + GQ+G
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG----- 309
Query: 211 SASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ P +V + + V G +T ++ + ++ A+G QLG
Sbjct: 310 -----VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG--- 361
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ +S + F P +I++LS ASGQH
Sbjct: 362 --IGESVDRNF--PKIIEALSVDG----ASGQH 386
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 14 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 72
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 73 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 127
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +K +A+GA+H
Sbjct: 128 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 185
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+T G+L G G LG R+ + MS + G
Sbjct: 186 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW----------- 234
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +S G++ +G + Y QLG D E PH +++LS+ + ++
Sbjct: 235 ---RHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISG 284
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A
Sbjct: 285 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLA 343
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG G+ D
Sbjct: 344 VTERNNVFAWGRGTNGQLGIGESVD 368
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 179/391 (45%), Gaps = 61/391 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 15 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 72
Query: 177 IASGADHFVMLTSRG-NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH- 234
+ GADH V + G + + G G GR+ ++S P +P+K H
Sbjct: 73 VTCGADHTVAYSQSGMEVYSWGW---GDFGRLGHGNSS-------DLFTP--LPIKALHG 120
Query: 235 --IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ +G + ++G N QLG D+E P I++
Sbjct: 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGI 173
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +AC
Sbjct: 174 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVAC 232
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + ++ G LY +G QLG+G +D L
Sbjct: 233 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 292
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 293 TSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 351
Query: 446 GWGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 352 AWGRGTNGQLGIGESVDRNFPKIIEALSVDG 382
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 16 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 74
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G+ ++Y++G D+GRLG N S+
Sbjct: 75 CGADHTVAYSQSGM-------------------------EVYSWGWGDFGRLGHGNSSDL 109
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 110 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 169 A--FEGIRIKMVAAGAEHTAAVTE 190
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 37 GVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G+ GQLGLG D + + E + + V G HT +TEDG +Y WG
Sbjct: 140 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGWG 198
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D +P+ V +K ++ G H++++ G +Y +G + +G
Sbjct: 199 WGRYGNLGLGDRTD-RLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK--YG 255
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G P KLE++S I +I+ G H + LTS G L G + GQ+G
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG----- 310
Query: 211 SASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ P +V + + V G +T ++ + ++ A+G QLG
Sbjct: 311 -----VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG--- 362
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ +S + F P +I++LS ASGQH
Sbjct: 363 --IGESVDRNF--PKIIEALSVDG----ASGQH 387
>gi|444917320|ref|ZP_21237422.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
gi|444711215|gb|ELW52165.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
Length = 773
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 211/494 (42%), Gaps = 75/494 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM---------HTVCLTED 87
G V G TGQLG G R T A V L +VV + GG H++ L D
Sbjct: 209 GTVWAWGSNQTGQLGDG-TTESRGTVAQVTALTDVVAIAAGGTGSGTINKTGHSLALRRD 267
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G V+ WG N G LG + P V V IS S+AL DGTV+AWG
Sbjct: 268 GTVWAWGDNQFGQLG-DGTNQPRSTPARVQGLTNVVSISGNSRSSLALRRDGTVWAWGDR 326
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
D G +G G+Q TP +++ + G++ IA+G + L G L G GQLG
Sbjct: 327 MD--GPLGGT-SGLQTTPAQVQGLRGVMAIAAGGRQALALRRDGTLWGWGDNRFGQLGT- 382
Query: 208 TQRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
S L VPLK + F + + + GS+ A+G N+ QLG
Sbjct: 383 ------------GSNLRTVPVPLKDLGSEVSVAFNSYHALAVRADGSLWAWGSNHRGQLG 430
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ +E + + LSD L G +S AL ++G ++A+G YG L
Sbjct: 431 DGTTETRTEPTR-------VSGLSDAVAVSL--GNDYSFALRADGTVWAWGW--YG-LFA 478
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCV--SFAIDSEGVLYGWGMGNGYQLGNGKE-- 381
S + P P+P L T S+A + A+ +G ++ WG Q+GNG +
Sbjct: 479 DGTSTSRSTPGPVPGLTSITALSVAPNAATGHALAVRVDGTVWAWGDNTSGQVGNGTKLR 538
Query: 382 -------DDILN---------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
D+ N +G ++A+G + +G+LG P +P
Sbjct: 539 QLAPIQVPDLTNVVAVATGSMHSFALRQDGTVWAWGDNQFGQLG-DGTRLGRLIPFQVPG 597
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-EPMKIEGKQLNNYT 478
L + + +IA G + A+ ++G ++ WG QLG+G P ++EG L + +
Sbjct: 598 LTN--VVAIASGAFHTLALRADGTVWAWGYNWHGQLGDGSTSSFRPTPARVEG--LTDVS 653
Query: 479 VLQVASGGQHSVIL 492
L A+G H++ L
Sbjct: 654 AL--AAGDWHTLAL 665
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 218/521 (41%), Gaps = 79/521 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G D GQLG G T V L +V V G +H++ L DG V+TWG N
Sbjct: 58 GALWAWGYNDFGQLGDG-TANAHLTPIRVPGLQDVEAVANGSLHSLALRRDGTVWTWGDN 116
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + PQ + I+A + HS+AL DGTV+ WG+ R +G +G
Sbjct: 117 QFGQLGTGEPWVTHATPQHLPSLTNVAAIAASEDHSLALRRDGTVWVWGNNR--YGQLGG 174
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
G + P L ++ I IA+ H + L + G + G + GQLG T S A
Sbjct: 175 AGNVLLLEPTHLAGLTDIAAIATSPSHRLALRADGTVWAWGSNQTGQLGDGTTESRGTVA 234
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE------ 270
+ + + + + ++ + G++ A+G N + QLG+ ++
Sbjct: 235 QV-TALTDVVAIAAGGTGSGTINKTGHSLALRRDGTVWAWGDNQFGQLGDGTNQPRSTPA 293
Query: 271 --------VQKSGNT----------------------------CFFTPHLIKSLSDKKFT 294
V SGN+ TP ++ L +
Sbjct: 294 RVQGLTNVVSISGNSRSSLALRRDGTVWAWGDRMDGPLGGTSGLQTTPAQVQGL--RGVM 351
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+A+G +LAL +G ++ +G + +G+LG S T P P+ L + S+A +
Sbjct: 352 AIAAGGRQALALRRDGTLWGWGDNRFGQLGTG--SNLRTVPVPLKDLGSE--VSVAFNSY 407
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGK-------------EDDILNSEGKIYAFG-RHD-- 398
+ A+ ++G L+ WG + QLG+G D + S G Y+F R D
Sbjct: 408 HALAVRADGSLWAWGSNHRGQLGDGTTETRTEPTRVSGLSDAVAVSLGNDYSFALRADGT 467
Query: 399 ---YGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNCV--SFAIDSEGVLYGWGMGN 451
+G GL S + P P+P L T S+A + A+ +G ++ WG
Sbjct: 468 VWAWGWYGLFADGTSTSRSTPGPVPGLTSITALSVAPNAATGHALAVRVDGTVWAWGDNT 527
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
Q+GNG + L P+++ L N V+ VA+G HS L
Sbjct: 528 SGQVGNGTKLRQLAPIQV--PDLTN--VVAVATGSMHSFAL 564
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 68/441 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G ++ R ++DL + V V H + + DG ++ WG N
Sbjct: 367 GTLWGWGDNRFGQLGTGSNL--RTVPVPLKDLGSEVSVAFNSYHALAVRADGSLWAWGSN 424
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + ++ P V+ AV +S G+ +S AL DGTV+AWG + GL
Sbjct: 425 HRGQLG-DGTTETRTEPTRVSGLSDAVAVSLGNDYSFALRADGTVWAWGWY-------GL 476
Query: 157 KGEGI---QKTPLKLESVSGIVKIA----SGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G + TP + ++ I ++ + H + + G + G GQ+G T+
Sbjct: 477 FADGTSTSRSTPGPVPGLTSITALSVAPNAATGHALAVRVDGTVWAWGDNTSGQVGNGTK 536
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ L P +VP ++ V TG ++F + G++ A+G N + QLG+
Sbjct: 537 ----------LRQLAPIQVP-DLTNVVAVATGSMHSFALRQDGTVWAWGDNQFGQLGDGT 585
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
P + L++ +ASG H+LAL ++G ++A+G + +G+LG +
Sbjct: 586 -------RLGRLIPFQVPGLTN--VVAIASGAFHTLALRADGTVWAWGYNWHGQLGDGST 636
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
S P + L D ++++A G+ + A+ ++G ++ WG QL +G
Sbjct: 637 SSFRPTPARVEGLTD--VSALAAGDWHTLALRTDGTVWAWGRNGSGQLADG--------- 685
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
EP + PT + ++ + + +++ G S A ++G GWG
Sbjct: 686 ------------------TVEPRSVPTQVTGVKGRAV-ALSAGADNSLARLADGTALGWG 726
Query: 449 MGNGYQLGNGKEDDILEPMKI 469
++G+G P ++
Sbjct: 727 SNAFSKIGDGVSTVHAAPTRV 747
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 171/412 (41%), Gaps = 70/412 (16%)
Query: 118 LPKKAVQISAGDS-----HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
P++A +AG+ HS+A+ G ++AWG + D G +G TP+++ +
Sbjct: 32 FPERAWDAAAGNKLATQGHSLAVDAHGALWAWG-YND-FGQLGDGTANAHLTPIRVPGLQ 89
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
+ +A+G+ H + L G + T G + GQLG ++ P +P
Sbjct: 90 DVEAVANGSLHSLALRRDGTVWTWGDNQFGQLG---------TGEPWVTHATPQHLPSLT 140
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ ++ + G++ +G N Y QLG A GN P + L+D
Sbjct: 141 NVAAIAASEDHSLALRRDGTVWVWGNNRYGQLGGA-------GNVLLLEPTHLAGLTD-- 191
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+ H LAL ++G ++A+G + G+LG +E + +L D + +IA G
Sbjct: 192 IAAIATSPSHRLALRADGTVWAWGSNQTGQLG-DGTTESRGTVAQVTALTD--VVAIAAG 248
Query: 353 NC---------VSFAIDSEGVLYGWGMGNGYQLGNG------------------------ 379
S A+ +G ++ WG QLG+G
Sbjct: 249 GTGSGTINKTGHSLALRRDGTVWAWGDNQFGQLGDGTNQPRSTPARVQGLTNVVSISGNS 308
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+ L +G ++A+G G LG S T P + L + + +IA G + A+
Sbjct: 309 RSSLALRRDGTVWAWGDRMDGPLG--GTSGLQTTPAQVQGL--RGVMAIAAGGRQALALR 364
Query: 440 SEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQL----NNYTVLQVASGG 486
+G L+GWG QLG G + P+K G ++ N+Y L V + G
Sbjct: 365 RDGTLWGWGDNRFGQLGTGSNLRTVPVPLKDLGSEVSVAFNSYHALAVRADG 416
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
L +++ Q + V + S A TL + G V G GQLG G R T A
Sbjct: 587 LGRLIPFQVPGLTNVVAIASGAFHTLALRADG-TVWAWGYNWHGQLGDGSTSSFRPTPAR 645
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIP-QTVNLPKK 121
VE L +V + G HT+ L DG V+ WG N G L A+G E +P Q + +
Sbjct: 646 VEGLTDVSALAAGDWHTLALRTDGTVWAWGRNGSGQL---ADGTVEPRSVPTQVTGVKGR 702
Query: 122 AVQISAGDSHSVALLEDGTVYAWGS 146
AV +SAG +S+A L DGT WGS
Sbjct: 703 AVALSAGADNSLARLADGTALGWGS 727
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
S A+D+ G L+ WG + QLG+G + L P+++ G Q V VA+G HS+ L +
Sbjct: 51 SLAVDAHGALWAWGYNDFGQLGDGTANAHLTPIRVPGLQ----DVEAVANGSLHSLALRR 106
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 190/393 (48%), Gaps = 39/393 (9%)
Query: 4 LLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+ +++ + P + V + S G +V + G+G+ GQLG G D +R +
Sbjct: 1 MAEEMAADEVTAPPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPT 59
Query: 64 LVEDLD--NVVEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK 120
+ LD +V V G HTV ++ G +VY+WG D G LG D F P LP
Sbjct: 60 QLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPI 114
Query: 121 KAV------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
KA+ QI+ GDSH +A+ +G V +WG R+ +G +GL P K+++ GI
Sbjct: 115 KALHGIRIKQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGI 172
Query: 175 -VK-IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLK 231
+K +A+GA+H +T G+L G G LG RN R L P V
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL-----GDRNDR-----LVPERVTSAG 222
Query: 232 RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ + V G +T +S G++ +G + Y QLG D E PH +++LS+
Sbjct: 223 GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSN 275
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ ++ G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++
Sbjct: 276 SFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVS 334
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
CG + A+ ++ WG G QLG G+ D
Sbjct: 335 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 367
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 178/391 (45%), Gaps = 61/391 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+ + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 14 PRTVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 71
Query: 177 IASGADHFVMLTSRG-NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH- 234
+ GADH V + G + + G G GR+ ++S P +P+K H
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGW---GDFGRLGHGNSS-------DLFTP--LPIKALHG 119
Query: 235 --IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ +G + ++G N QLG D+E P I++
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGI 172
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +AC
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVAC 231
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + ++ G LY +G QLG+G +D L
Sbjct: 232 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 446 GWGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 351 AWGRGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 48/349 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ I++GA H V L S + + G E GQLG + R + +S L+
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGH--GDAEDRPSPTQLSALDG-------H 67
Query: 234 HIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I V G +T S+ + ++G ++ +LG +S + FTP IK+L
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-------SDLFTPLPIKALHGI 120
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ +A G H LA+ EG++ ++GR+ G+LGL + + + P I + + I +A
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIRIKMVAA 179
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE----------------------- 388
G + A+ +G LYGWG G LG G +D L E
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV 239
Query: 389 ---GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
G +Y +G YG+LG ++ + + P + +L + I+ I+ G + A+ S+G LY
Sbjct: 240 SYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSDGKLY 298
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
GWG Q+G G D P+++ + ++ V+QV+ G +H++ + +
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSPVQV--RFPDDQKVVQVSCGWRHTLAVTE 345
>gi|58268916|ref|XP_571614.1| pim1 protein (poly(a)+ RNA transport protein 2) [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112620|ref|XP_774853.1| hypothetical protein CNBF0180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257501|gb|EAL20206.1| hypothetical protein CNBF0180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227849|gb|AAW44307.1| pim1 protein (poly(a)+ RNA transport protein 2), putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 590
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 63/357 (17%)
Query: 18 QKVFVTSEAVPTLK-CKTGGGVVLTCGQGDTGQLGLGPDVMER----KTFALVEDL---- 68
+K+ A+P++ KT + G GD GQ GLGPD ++ K + E+
Sbjct: 68 KKIIGGINAIPSIPPVKTPHNALFVWGTGDQGQFGLGPDNLDEIGRPKLHSWFEEQIEEG 127
Query: 69 ----------DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR------EAEGDSEFI 112
+ V GGMHT+ + E G+V +WG ND ALGR + + E I
Sbjct: 128 KLSRDGKPGSGGLESVYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMI 187
Query: 113 PQ---------TVNLPK---KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-- 158
P L K +AVQ++AGDS SVA+ + G + AWGSFR + G +G G
Sbjct: 188 PNEDLESYPYVVETLEKEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVP 247
Query: 159 --EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
Q TP+ L +++ I +I+ GADH + LT+ G++ G E+ QLGR
Sbjct: 248 GHPKFQYTPISLPALAKVQITQISCGADHVLALTTIGHVYVWGKGEENQLGRRIISRRRI 307
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
N LEP + L ++I V G+Y++F + +KG + +GLN + Q G A+ +
Sbjct: 308 NG------LEPERLGL--RNIVHVAAGIYHSFAVDNKGVVYGWGLNTFHQTGVAEHQ--- 356
Query: 274 SGNTCFFTPHLIKSL-SDK----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
TP ++ +L DK K ++ G+HHSL L G+++ GR D LGL
Sbjct: 357 ---DMIITPTVVDALHPDKHNGSKVIKVSGGEHHSLFLFDNGEVWGCGRCDANELGL 410
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 64/287 (22%)
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP--------HLI 285
++ V+ G +T I G + ++G+N+ + LG ++V N P +++
Sbjct: 140 LESVYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMIPNEDLESYPYVV 199
Query: 286 KSLSDKKF--TMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVS-EPVTEPTPI-- 338
++L + F +A+G S+A++ +G++ A+G R + G LG V P + TPI
Sbjct: 200 ETLEKEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISL 259
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---------NGKEDDILNSEG 389
P+L IT I+CG A+ + G +Y WG G QLG NG E +
Sbjct: 260 PALAKVQITQISCGADHVLALTTIGHVYVWGKGEENQLGRRIISRRRINGLEPE------ 313
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
RLGL+N I +A G SFA+D++GV+YGWG+
Sbjct: 314 -----------RLGLRN------------------IVHVAAGIYHSFAVDNKGVVYGWGL 344
Query: 450 GNGYQLGNGKEDD-ILEPMKIEG---KQLNNYTVLQVASGGQHSVIL 492
+Q G + D I+ P ++ + N V++V+ G HS+ L
Sbjct: 345 NTFHQTGVAEHQDMIITPTVVDALHPDKHNGSKVIKVSGGEHHSLFL 391
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+D + I+ G + A+ G LY WG GN QLG G E+ P + K L Y +
Sbjct: 509 EDNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGLGSEEVAEVPSLVRSKLLRPYRSV 568
Query: 481 QVASGGQHSVILAKPKPN 498
V++GGQH V LA KP+
Sbjct: 569 TVSAGGQHCVALAVKKPD 586
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 69 DN-VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN----LPKKAV 123
DN VV++ G H + +++ G +Y WG + LG +E +E +P V P ++V
Sbjct: 510 DNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGLGSEEVAE-VPSLVRSKLLRPYRSV 568
Query: 124 QISAGDSHSVAL 135
+SAG H VAL
Sbjct: 569 TVSAGGQHCVAL 580
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 209/490 (42%), Gaps = 62/490 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYT 92
TG G V G GQLG G + T A V L V + GG +T LT G V+
Sbjct: 229 TGSGGVWCWGDNGFGQLGDG-SFTDSSTPAAVGGLPSGVTAIAAGGRYTCALTSSGGVWC 287
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG ND G LG + + LP I+AG +H+ AL G V+ WG + G
Sbjct: 288 WGRNDSGQLGDGSFTNRSTPGAVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGG--NDSG 345
Query: 153 SMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + TP + + SG+ IA+G H TS G + G GQLG T
Sbjct: 346 QLGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTD 405
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
S PG V + + G Y+T ++ + +G N Y QLG+ +
Sbjct: 406 RS----------TPGAVSGLPSGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTT 455
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ TP + L T +A+G +H+ AL S G ++ +GR+D G+LG +
Sbjct: 456 NRS-------TPGAVSGL-PSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN 507
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
T P + L +T+IA G+ + A+ S G ++ WG+ N QLG+G D
Sbjct: 508 RST-PGAVGGLPSG-VTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAV 565
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQD 422
L ++ +G + G+LG N S PV + +PS
Sbjct: 566 GGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAV-SGLPS--- 621
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
+T+IA GN + A+ S G ++ WG QLG+G + P + G V +
Sbjct: 622 -GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSG---VTAI 677
Query: 483 ASGGQHSVIL 492
A+G +H+ L
Sbjct: 678 AAGDEHTCAL 687
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 219/509 (43%), Gaps = 65/509 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDL-DNVVE 73
PS + + T + GGV+ C G+ GQLG G +R T V L V
Sbjct: 110 PSGVTAIAAGGAHTCALTSSGGVM--CWGGNYFGQLGDG-SYTDRSTPVAVSGLPSGVTA 166
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHS 132
+ GG HT L G V+ WG N G LG + P V+ LP + I+AG +H+
Sbjct: 167 IAAGGAHTCALMSSGGVWCWGYNLSGQLG-DGSTIYHITPVAVSGLPSEVTAIAAGYAHT 225
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRG 191
AL G V+ WG + G +G TP + + SG+ IA+G + LTS G
Sbjct: 226 CALTGSGGVWCWG--DNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCALTSSG 283
Query: 192 NLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFIS 248
+ G + GQLG T RS PG V + + G + ++
Sbjct: 284 GVWCWGRNDSGQLGDGSFTNRS------------TPGAVGGLPSGVTAIAAGGAHTCALT 331
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G + +G N+ QLG+ S +S TP + L T +A+G H+ A S
Sbjct: 332 SSGGVWCWGGNDSGQLGDG-SYTDRS------TPGAVSGL-PSGVTAIAAGGAHTCARTS 383
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G ++ +G + YG+LG ++ T P + L +T+IA GN + A+ ++ W
Sbjct: 384 SGGVWCWGGNFYGQLGDGTTTDRST-PGAVSGLPSG-VTAIAAGNYHTCALTGSDGVWCW 441
Query: 369 GMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGRLG 403
G QLG+G + L S G ++ +GR+D G+LG
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLG 501
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ T P + L +T+IA G+ + A+ S G ++ WG+ N QLG+G D
Sbjct: 502 DGTTTNRST-PGAVGGLPSG-VTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDS 559
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+ + G V+ +A+G H+ L
Sbjct: 560 STPVAVGGLPSG---VMAIAAGNYHTCAL 585
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 201/485 (41%), Gaps = 60/485 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEV 74
PS + + T + GGV G D+GQLG G +R T V L V +
Sbjct: 314 PSGVTAIAAGGAHTCALTSSGGVWCWGGN-DSGQLGDG-SYTDRSTPGAVSGLPSGVTAI 371
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
GG HT T G V+ WG N G LG D LP I+AG+ H+ A
Sbjct: 372 AAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAIAAGNYHTCA 431
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNL 193
L V+ WG + +G +G + TP + + SG+ IA+G H LTS G +
Sbjct: 432 LTGSDGVWCWG--DNFYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSSGGV 489
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGS 252
G + GQLG T + S PG V + + G Y+T + S G
Sbjct: 490 WCWGRNDSGQLGDGTTTNRS----------TPGAVGGLPSGVTAIAAGDYHTCALMSSGG 539
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +GLNN QLG+ S S TP + L +A+G +H+ AL +
Sbjct: 540 VWCWGLNNRGQLGDG-SYTDSS------TPVAVGGLPSGVM-AIAAGNYHTCALTGSDGV 591
Query: 313 YAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
+ +G + G+LG N S PV + +PS +T+IA GN + A+ S G ++ WG
Sbjct: 592 WCWGTNSDGQLGDGTTTNRSTPVAV-SGLPS----GVTAIAAGNYHTCALTSSGGVWCWG 646
Query: 370 MGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGRLGL 404
QLG+G + L G ++ +G + YG+LG
Sbjct: 647 YNLSGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGD 706
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ T P + L +T+IA G + A+ G + WG QLG+G+
Sbjct: 707 GTTTNRST-PGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRT 764
Query: 465 EPMKI 469
P+ +
Sbjct: 765 TPVDV 769
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 192/466 (41%), Gaps = 54/466 (11%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
P R + L V + G HT LT G+V+ WG N G LG + D
Sbjct: 45 PSTTTRLHTSSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV 104
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-S 172
LP I+AG +H+ AL G V WG + G +G + TP+ + + S
Sbjct: 105 AVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGG--NYFGQLGDGSYTDRSTPVAVSGLPS 162
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
G+ IA+G H L S G + G GQLG + + + P V
Sbjct: 163 GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGST----------IYHITPVAVSGLP 212
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ + G +T ++ G + +G N + QLG+ S S TP + L
Sbjct: 213 SEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDG-SFTDSS------TPAAVGGL-PS 264
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
T +A+G ++ AL S G ++ +GR+D G+LG + + T P + L +T+IA
Sbjct: 265 GVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRST-PGAVGGLPSG-VTAIAA 322
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------------ILN 386
G + A+ S G ++ WG + QLG+G D
Sbjct: 323 GGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCART 382
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
S G ++ +G + YG+LG ++ T P + L +T+IA GN + A+ ++
Sbjct: 383 SSGGVWCWGGNFYGQLGDGTTTDRST-PGAVSGLPSG-VTAIAAGNYHTCALTGSDGVWC 440
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG QLG+G + P + G V +A+G H+ L
Sbjct: 441 WGDNFYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGNYHTCAL 483
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 186/381 (48%), Gaps = 39/381 (10%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P ++V + S G VV + G+G+ GQLG G D +R + + LD VV
Sbjct: 14 PVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVS 72
Query: 74 VVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HT +E +VY+WG D G LG D F PQ P KA+ QI+
Sbjct: 73 VTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDL-FTPQ----PIKALHGLRIKQIA 127
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ DG V +WG R+ +G +GL P K+++ G+ VK +A+GA+H
Sbjct: 128 CGDSHCLAVTMDGEVQSWG--RNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHT 185
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVY 243
+T G L G G LG RN R L P +V ++ + V G
Sbjct: 186 AAVTEDGELYGWGWGRYGNLGL-----GDRNDR-----LVPEKVSTVEGVKMVKVACGWR 235
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+T +SS G + +G + Y QLG D E TPH +++L + + ++ G H
Sbjct: 236 HTISVSSSGGLYTYGWSKYGQLGHGDFEDH-------LTPHKLEALQENLISEISGGWRH 288
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++AL S+GK+Y +G + +G++G+ + + + P + ++ + I+CG + A+
Sbjct: 289 TMALTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQVKFPHEQKVVHISCGWRHTLAVTER 347
Query: 363 GVLYGWGMGNGYQLGNGKEDD 383
++ WG G QLG+G+ D
Sbjct: 348 QNVFSWGRGTNGQLGHGESID 368
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 170/403 (42%), Gaps = 100/403 (24%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKI 177
++ + ISAG SHSVALL V +WG D G +G + +P L ++ G +V +
Sbjct: 16 RRVLLISAGASHSVALLSGNVVCSWGRGED--GQLGHGDAEDRLSPTYLSALDGHEVVSV 73
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
GADH + +
Sbjct: 74 TCGADHTTAYS------------------------------------------------E 85
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
FT VY ++G ++ +LG +S + FTP IK+L + +A
Sbjct: 86 SFTQVY-----------SWGWGDFGRLGHGNS-------SDLFTPQPIKALHGLRIKQIA 127
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G H LA+ +G++ ++GR+ G+LGL + + P I + Q ++ +A G +
Sbjct: 128 CGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVSVKMVAAGAEHTA 186
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDIL--------------------------NSEGKI 391
A+ +G LYGWG G LG G +D L +S G +
Sbjct: 187 AVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGL 246
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
Y +G YG+LG + + +T P + +LQ+ I+ I+ G + A+ S+G LYGWG
Sbjct: 247 YTYGWSKYGQLGHGDFEDHLT-PHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNK 305
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Q+G G D P+++ K + V+ ++ G +H++ + +
Sbjct: 306 FGQVGVGDNVDHCSPVQV--KFPHEQKVVHISCGWRHTLAVTE 346
>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
coralloides DSM 2259]
gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
2259]
Length = 827
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 210/463 (45%), Gaps = 58/463 (12%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V + G D+GQLG G + R T V L V V G H V + DG WG
Sbjct: 394 GDGTVRSWGNNDSGQLGDGTYI--RHTPTPVPGLTGVTAVSAGEDHVVAVLSDGSPRVWG 451
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N LGR E + P V +A ++AG +HS+ALL DGTV+AWG +S ++
Sbjct: 452 DNQFMQLGRPPESVNRGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGD--NSFSAL 509
Query: 155 GLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
GL E G TP+++ ++G+ +A+G + + + + G ++ G GQLG
Sbjct: 510 GLGDEPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQLG-------- 561
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADS-EV 271
S + E I V G Y+ + G++ ++G N QLG+ + E
Sbjct: 562 ---SESASIFQIPEPIFGLSGITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDER 618
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+ G T + T +A+G H+LAL ++G ++A+G + G LG +
Sbjct: 619 PRPGQVAGLT----------QVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQT-- 666
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------- 378
+ TP+ + ++A G S A+ +G ++ WG N QLG+
Sbjct: 667 -SRSTPVQVQGLTGVIAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVP 725
Query: 379 ----------GKEDDILNSE-GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
G++ + E G + AFG++ G+LGL E + I SL++
Sbjct: 726 GLAGVQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSR-GEIASLRNP--RG 782
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
IA G + A+ ++G ++ WG QLGNG+ + +P+ ++
Sbjct: 783 IAAGIAHTLAVAADGTVWAWGANATGQLGNGEAANSPQPITVK 825
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 205/460 (44%), Gaps = 64/460 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G ++GQLG G ME R T V DL V + G H++ + DG V WG
Sbjct: 244 GTVWAWGDNESGQLGDG--TMEGRLTPVQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGA 301
Query: 96 NDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G LG EG+ P V+ V ++A S S A+ DGTV +WGS D G
Sbjct: 302 NIYGQLGDGGFSLEGNPR--PVAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGSNVD--G 357
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
++G++ + P K+ ++ + ++ G + V L G + + G + GQLG T
Sbjct: 358 ALGVEQRSNSRVPSKVFGLTDVATVSVGGYYAVALMGDGTVRSWGNNDSGQLGDGTYIRH 417
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
+ G++ + V H+ V S GS +G N + QLG V
Sbjct: 418 TPTPVPGLTGVT--AVSAGEDHVVAVL---------SDGSPRVWGDNQFMQLGRPPESVN 466
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ G P + L++ +++A+G+ HSLAL ++G ++A+G + + LGL + EP
Sbjct: 467 RGG------PVQVPGLTEA--SLVAAGKTHSLALLADGTVWAWGDNSFSALGLGD--EPG 516
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
PTP+ + + S+A G S A+ + G + WG G QLG+ I+
Sbjct: 517 ASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQLGS--------ESASIF 568
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
P PI L IT++A G+ S A+ +G ++ WG
Sbjct: 569 QI-------------------PEPIFGLSG--ITAVAMGHWYSLALREDGTVWSWGYNAS 607
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G D+ P ++ G V +A+G H++ L
Sbjct: 608 GQLGDGTTDERPRPGQVAGLT----QVTAIAAGASHALAL 643
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 222/487 (45%), Gaps = 58/487 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G GQLG G +E + V L +VV V + + DG V +WG
Sbjct: 294 GTVRAWGANIYGQLGDGGFSLEGNPRPVAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGS 353
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N +GALG E +S +P V +S G ++VAL+ DGTV +WG+ + G +G
Sbjct: 354 NVDGALGVEQRSNSR-VPSKVFGLTDVATVSVGGYYAVALMGDGTVRSWGN--NDSGQLG 410
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G I+ TP + ++G+ +++G DH V + S G+ G + QLGR + +
Sbjct: 411 -DGTYIRHTPTPVPGLTGVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPE-----S 464
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
RG PG L + V G ++ + + G++ A+G N++S LG D
Sbjct: 465 VNRGGPVQVPG---LTEASL--VAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPGASP 519
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + L+ + LA+G++ SLA+ + G + A+G +G+LG ++ S
Sbjct: 520 ------TPVQVPKLAGVR--SLAAGENSSLAVLANGTVMAWGYGLFGQLGSESASI-FQI 570
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
P PI L IT++A G+ S A+ +G ++ WG QLG+G D+
Sbjct: 571 PEPIFGLSG--ITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLT 628
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L ++G ++A+G + G LG + + TP+ + ++A
Sbjct: 629 QVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQT---SRSTPVQVQGLTGVIAVAA 685
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ +G ++ WG N QLG+ P ++ G V ++A+G +H++
Sbjct: 686 GEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLA----GVQRIAAGEKHAL 741
Query: 491 ILAKPKP 497
+ P
Sbjct: 742 AAVEGGP 748
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 202/488 (41%), Gaps = 94/488 (19%)
Query: 51 GLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE 110
G+ P + R ++V V G H++ + DG V WG + +G
Sbjct: 116 GVAPAITHRFGLSVVA-CPGAPAVAAGRYHSLMVRPDGTVLEWGLSY-----LRFDGGVR 169
Query: 111 FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
+P ++ +SAG+ H++AL DGTV+AWGS + G +G + + TP+++
Sbjct: 170 PVPGLTDVRA----VSAGNEHALALRTDGTVWAWGS--NFAGQLGDGTKTSRSTPVQVVG 223
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL------GRITQ-------RSASRNAR 217
++ ++ +++ + L G + G E GQL GR+T R A
Sbjct: 224 LTEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVRVTGLAAG 283
Query: 218 RGMSF-------------------------LEPGEVPLKRKHIDDVFTGVYNTFIS---- 248
RG S LE P+ + DV + +T +S
Sbjct: 284 RGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVAVSKLTDVVSVAASTSLSFAVH 343
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G++ ++G N LG V++ N+ P + L+D ++ G ++++AL
Sbjct: 344 SDGTVSSWGSNVDGALG-----VEQRSNSRV--PSKVFGLTD--VATVSVGGYYAVALMG 394
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G + ++G +D G+LG PTP+P L +T+++ G A+ S+G W
Sbjct: 395 DGTVRSWGNNDSGQLGDGTYIR--HTPTPVPGLTG--VTAVSAGEDHVVAVLSDGSPRVW 450
Query: 369 GMGNGYQLGN------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
G QLG GK + L ++G ++A+G + + LG
Sbjct: 451 GDNQFMQLGRPPESVNRGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALG 510
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L + EP PTP+ + + S+A G S A+ + G + WG G QLG+
Sbjct: 511 LGD--EPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQLGSESASIF 568
Query: 464 LEPMKIEG 471
P I G
Sbjct: 569 QIPEPIFG 576
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
P+P L D + +++ GN + A+ ++G ++ WG QLG+G + P+++ G
Sbjct: 170 PVPGLTD--VRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLT-- 225
Query: 476 NYTVLQVASGGQHSVILAK 494
V+ V++ G S+ L K
Sbjct: 226 --EVIAVSAAGYSSLALRK 242
>gi|409081255|gb|EKM81614.1| hypothetical protein AGABI1DRAFT_111896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426196490|gb|EKV46418.1| hypothetical protein AGABI2DRAFT_193139 [Agaricus bisporus var.
bisporus H97]
Length = 452
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 194/413 (46%), Gaps = 72/413 (17%)
Query: 38 VVLTCGQGDTGQLGLGPDVME-----RKTFALVEDLDN---------VVEVVVGGMHTVC 83
V+ G G+ GQ G+GPDV++ R+ + + N + + GG+HT+
Sbjct: 20 VLFAWGAGNFGQFGMGPDVLDSLTTPRRNQWVEAQIGNGTFGEIGAGITAIAAGGLHTLF 79
Query: 84 LTEDGKVYTWGCNDEGALGR--------EAEGDSEFIPQTVNLPK----------KAVQI 125
+ E+G V++ G ND+ ALGR + EG I + + P+ +AV +
Sbjct: 80 IDENGTVWSCGANDDAALGRITTNVPNPDKEGLFLDIDELTSWPRPIQTLVDQNFRAVVV 139
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHF 184
+AGDS A+ ++G + WG++R G++G Q+ P + + S + +A+G +H
Sbjct: 140 AAGDSIGAAVSDEGELRVWGTYRGMEGALGFSSRSEKQQLPTPILTSSRVSSVAAGNNHL 199
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL--KRKHIDDVFTGV 242
V+LT++G + T G EQ QLGR R + P ++ L + + V G
Sbjct: 200 VILTTQGYIYTLGSGEQYQLGRKIIEG------RKIDGTNPRKIVLGKRLRKAVHVAAGS 253
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF-----TML 296
Y++F I + A+GLNN LG+ + + ++P I+SLS + T +
Sbjct: 254 YHSFAIDENDDVWAWGLNN---LGQTGTGWFSEEDNIVYSPQKIESLSRQNLAGDYVTQI 310
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-----------------PTP-- 337
A G+HHSL L S GK+Y+ GR + G+LGL++ + + E PTP
Sbjct: 311 AGGEHHSLFLTSGGKVYSCGRMNGGQLGLQDDNPAIVEWRMKYAEKYGDKLPQLLPTPTQ 370
Query: 338 --IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
P D + ++ G + + G L WG G +LG K++++ E
Sbjct: 371 IMFPDANDP-VVQVSAGLHNNAVVTQGGALLAWGQGVQGELGLRKKEEVKTPE 422
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 163/397 (41%), Gaps = 82/397 (20%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
+GI IA+G H + + G + + G + LGRIT + + + G+ FL+ E+
Sbjct: 65 AGITAIAAGGLHTLFIDENGTVWSCGANDDAALGRITTNVPNPD-KEGL-FLDIDELTSW 122
Query: 229 --PLKRKHIDDVFTGVY-------NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
P++ +D F V +S +G + +G Y + A +S
Sbjct: 123 PRPIQ-TLVDQNFRAVVVAAGDSIGAAVSDEGELRVWG--TYRGMEGALGFSSRSEKQQL 179
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPI 338
TP L S + + +A+G +H + L ++G IY G + +LG K + + P
Sbjct: 180 PTPILTSS----RVSSVAAGNNHLVILTTQGYIYTLGSGEQYQLGRKIIEGRKIDGTNPR 235
Query: 339 PSLQDKTI---TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---KEDDI-------- 384
+ K + +A G+ SFAID ++ WG+ N Q G G +ED+I
Sbjct: 236 KIVLGKRLRKAVHVAAGSYHSFAIDENDDVWAWGLNNLGQTGTGWFSEEDNIVYSPQKIE 295
Query: 385 ------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTE------- 413
L S GK+Y+ GR + G+LGL++ + + E
Sbjct: 296 SLSRQNLAGDYVTQIAGGEHHSLFLTSGGKVYSCGRMNGGQLGLQDDNPAIVEWRMKYAE 355
Query: 414 ----------PTP----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
PTP P D + ++ G + + G L WG G +LG K
Sbjct: 356 KYGDKLPQLLPTPTQIMFPDANDPVV-QVSAGLHNNAVVTQGGALLAWGQGVQGELGLRK 414
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++++ P + K+ + V+ GGQH++ L + K
Sbjct: 415 KEEVKTPEVVVRKEGGAWFATAVSCGGQHTIGLFRKK 451
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 2 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 60
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 115
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +K +A+GA+H
Sbjct: 116 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 173
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+T G+L G G LG R+ + MS + G
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW----------- 222
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +S G++ +G + Y QLG D E PH +++LS+ + ++
Sbjct: 223 ---RHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISG 272
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A
Sbjct: 273 GFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLA 331
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG G+ D
Sbjct: 332 VTERNNVFAWGRGTNGQLGIGESVD 356
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 177/390 (45%), Gaps = 59/390 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 3 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 60
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-- 234
+ GADH V + G + G GR+ ++S P +P+K H
Sbjct: 61 VTCGADHTVAYSQSG--MEVYSWGWGDFGRLGHGNSS-------DLFTP--LPIKALHGI 109
Query: 235 -IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G + ++ +G + ++G N QLG D+E P I++ +
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGIR 162
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +ACG
Sbjct: 163 IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACG 221
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
+ ++ G LY +G QLG+G +D L
Sbjct: 222 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALT 281
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 282 SDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 340
Query: 447 WGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 341 WGRGTNGQLGIGESVDRNFPKIIEALSVDG 370
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 62
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G+ ++Y++G D+GRLG N S+
Sbjct: 63 CGADHTVAYSQSGM-------------------------EVYSWGWGDFGRLGHGNSSDL 97
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 98 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 156
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 157 A--FEGIRIKMVAAGAEHTAAVTE 178
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G + T G GQLG G D+ + +E L N + ++ G HT+ LT DGK+Y WG
Sbjct: 232 GALYTYGWSKYGQLGHG-DLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWG 290
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G +G D + P V P +K VQ+S G H++A+ E V+AWG R ++G
Sbjct: 291 WNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG--RGTNG 347
Query: 153 SMGLKGEGIQKT-PLKLESVS 172
+G+ GE + + P +E++S
Sbjct: 348 QLGI-GESVDRNFPKIIEALS 367
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 187/406 (46%), Gaps = 52/406 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V T G+G+ GQLGLG D ++ LVE L + V++ G HTV LT+DGKVYTWG
Sbjct: 3 VYTWGRGEDGQLGLG-DTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRG 61
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
D+G LG G +F+P+ V KK Q++ G H+ A+ G +Y WG +G +
Sbjct: 62 DDGRLGHGDNG-WKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGG--GMYGKL 118
Query: 155 GLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G E TP +ES+ G+ ++A G+ H V+L ++ T G E G G
Sbjct: 119 GHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGH-----G 173
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
+ + + V + K I G + +S G + FG + +LG +SE
Sbjct: 174 DTSGHQYSPYCVSELVEINIKQISAC--GFHTAALSENGQVFTFGEGKFGRLGH-NSERN 230
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ C I +L K+ +A G H+ A+ G ++ +G ++G+LG + +
Sbjct: 231 QPVAKC------IDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQI 284
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
PT + SL DK I + CG + A+ +G ++ WG G
Sbjct: 285 I-PTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNG--------------------- 322
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
D+G+LG N + VTEP I + K + S+A N + A+
Sbjct: 323 -----DHGKLG-HNDTNKVTEPKLIETFNSKRVISVASYNEHTVAL 362
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 190/416 (45%), Gaps = 57/416 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
VYTWG ++G LG D ++ P V ++ VQIS G H+V L +DG VY WG
Sbjct: 3 VYTWGRGEDGQLGLGDTSD-QYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWG-- 59
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
R G +G G + P +E + + ++ G+ H +T G L T G G+LG
Sbjct: 60 RGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
+ N S +E +K ++ V G S+ +++ + G
Sbjct: 120 H-----GNENGHSTPSLVES----IKGLYVRQVACG-------SRHTVVLLENQDVYTWG 163
Query: 266 EADSEVQKSGNTC--FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ ++ V G+T ++P+ + L + +++ H+ AL+ G+++ FG +GRL
Sbjct: 164 DKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRL 223
Query: 324 GLKN-VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
G + ++PV + I +L K I +ACG + A+ G ++ WG G QLG+G +
Sbjct: 224 GHNSERNQPVAKC--IDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDK- 280
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
V++ + PT + SL DK I + CG + A+ +G
Sbjct: 281 ------------------------VNQII--PTRVESLIDKNIIQLTCGWSHTVALTDKG 314
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
++ WG G+ +LG+ + + EP IE N+ V+ VAS +H+V L P N
Sbjct: 315 EVFTWGNGDHGKLGHNDTNKVTEPKLIE--TFNSKRVISVASYNEHTVALVNPDAN 368
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 151/332 (45%), Gaps = 25/332 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD G+LG G D + LVEDL + V +V G HT +T G++Y
Sbjct: 50 TDDGKVYTWGRGDDGRLGHG-DNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELY 108
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
TWG G LG E + P V K Q++ G H+V LLE+ VY WG +
Sbjct: 109 TWGGGMYGKLGHGNE-NGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKEN 167
Query: 150 SHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G G Q +P + + I +I++ H L+ G + T G +G+ GR+
Sbjct: 168 GVSGHG-DTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFG---EGKFGRL 223
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
N+ R + + + ++ G + ++ G + +G + QLG
Sbjct: 224 -----GHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHG 278
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D Q P ++SL DK L G H++AL +G+++ +G D+G+LG N
Sbjct: 279 DKVNQ-------IIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLG-HN 330
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+ VTEP I + K + S+A N + A+
Sbjct: 331 DTNKVTEPKLIETFNSKRVISVASYNEHTVAL 362
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 185/375 (49%), Gaps = 30/375 (8%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NV 71
E P V V++ A ++ G V+ T G+G+ GQLG G D +R ++ D +
Sbjct: 11 EAPPAVVLVSAGASHSVAL-LAGNVLCTWGRGEDGQLGHG-DAEDRLVPTVISGFDAPGI 68
Query: 72 VEVVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
V+ G HT +ED +VY+WG D G LG D F PQ V + K Q++ G
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDV-FTPQPVKALQGIKIKQLACG 127
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHFVM 186
DSH +A+ G V +WG R+ +G +GL P +++ GI VK IA+GA+H
Sbjct: 128 DSHCLAVTMAGEVLSWG--RNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAA 185
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+T G++ G G LG RN R F+ ++ + V G +T
Sbjct: 186 VTEDGDIYGWGWGRYGNLGL-----GDRNDR----FVPEKVSSVEGDKMVLVACGWRHTI 236
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+SS GS+ +G + Y QLG D E PH +++L D + ++ G H++A
Sbjct: 237 TVSSSGSLYTYGWSKYGQLGHGDFEDH-------LVPHKVEALKDSSTSQISGGWRHTMA 289
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L S+GK+Y +G + +G++G + ++ + P + +++ + +ACG + A + +
Sbjct: 290 LTSDGKLYGWGWNKFGQVGAGDNADHCS-PAQVNFPEEQKVAQVACGWRHTLAFTEKKNV 348
Query: 366 YGWGMGNGYQLGNGK 380
+ WG G QLG+G+
Sbjct: 349 FAWGRGTSGQLGHGE 363
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 50/357 (14%)
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGE 227
E+ +V +++GA H V L + L T G E GQLG + R +S F PG
Sbjct: 11 EAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH--GDAEDRLVPTVISGFDAPG- 67
Query: 228 VPLKRKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
I V G +T + + + ++G ++ +LG +S T FTP +
Sbjct: 68 -------ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS-------TDVFTPQPV 113
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
K+L K LA G H LA+ G++ ++GR+ G+LGL + + P I + + +
Sbjct: 114 KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAFEGIS 172
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G + A+ +G +YGWG G LG G +D
Sbjct: 173 VKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGW 232
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
++S G +Y +G YG+LG + + + P + +L+D + + I+ G + A+
Sbjct: 233 RHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALT 291
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
S+G LYGWG Q+G G D P ++ + V QVA G +H++ + K
Sbjct: 292 SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPE--EQKVAQVACGWRHTLAFTEKK 346
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 174/412 (42%), Gaps = 65/412 (15%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTV---NLPKKAVQI 125
VV V G H+V L + TWG ++G LG GD+E +P + + P I
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH---GDAEDRLVPTVISGFDAPGITSVI 72
Query: 126 SAGDSHSVALLED-GTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IVKIAS 179
D H+ A ED VY+WG G G G G TP ++++ G I ++A
Sbjct: 73 CGAD-HTTAYSEDEHQVYSWG-----WGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLAC 126
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + +T G +L+ G + GQLG T S L + + +
Sbjct: 127 GDSHCLAVTMAGEVLSWGRNQNGQLGLGTTED---------SLLPQTIQAFEGISVKMIA 177
Query: 240 TGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +T ++ G I +G Y LG D + F P + S+ K ++A
Sbjct: 178 AGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDR-------FVPEKVSSVEGDKMVLVAC 230
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++ ++S G +Y +G YG+LG + + + P + +L+D + + I+ G + A
Sbjct: 231 GWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMA 289
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+ S+G LYGWG Q+G G D + P +
Sbjct: 290 LTSDGKLYGWGWNKFGQVGAGDNADHCS---------------------------PAQVN 322
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+++ + +ACG + A + ++ WG G QLG+G+ D P+ I+
Sbjct: 323 FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIID 374
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 145/312 (46%), Gaps = 40/312 (12%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G DV + ++ + + ++ G H + +T G+V +WG N
Sbjct: 88 VYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLAVTMAGEVLSWGRN 146
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG DS +PQT+ + I+AG H+ A+ EDG +Y WG R +G++
Sbjct: 147 QNGQLGLGTTEDS-LLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGR--YGNL 203
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL + P K+ SV G +V +A G H + ++S G+L T G + GQLG
Sbjct: 204 GLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGH------ 257
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFT-----GVYNTF-ISSKGSILAFGLNNYSQLGE 266
E VP K + + D T G +T ++S G + +G N + Q+G
Sbjct: 258 --------GDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA 309
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
D N +P + ++K +A G H+LA + ++A+GR G+LG
Sbjct: 310 GD-------NADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGH- 361
Query: 327 NVSEPVTEPTPI 338
E V TP+
Sbjct: 362 --GEIVDRNTPV 371
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 191/393 (48%), Gaps = 39/393 (9%)
Query: 4 LLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+ ++++ + P ++V + S G +V + G+G+ GQLG G D +R +
Sbjct: 1 MTEEMVADEVTPPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRLSPT 59
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK 120
+ LD+ +V V G HTV +E +VY+WG D G LG D F P LP
Sbjct: 60 QLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDL-FTP----LPI 114
Query: 121 KAV------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
KA+ QI+ GDSH +A+ +G V +WG R+ +G +GL P K+++ GI
Sbjct: 115 KALHGIRIKQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGI 172
Query: 175 -VK-IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLK 231
+K +A+GA+H +T G+L G G LG RN R L P V
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL-----GDRNDR-----LVPERVTSAG 222
Query: 232 RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ + V G +T +S G++ +G + Y QLG D E PH +++L +
Sbjct: 223 GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LVPHKLEALGN 275
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ ++ G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++
Sbjct: 276 SVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRIPDDQKVVQVS 334
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
CG + A+ ++ WG G QLG G+ D
Sbjct: 335 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESLD 367
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 174/389 (44%), Gaps = 57/389 (14%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
P++ + ISAG SHSVALL V +WG D G + + T L IV +
Sbjct: 14 PRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVT 73
Query: 179 SGADHFVMLT-SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH--- 234
GADH V + SR + + G G GR+ ++S P +P+K H
Sbjct: 74 CGADHTVAYSESRMEVYSWGW---GDFGRLGHGNSS-------DLFTP--LPIKALHGIR 121
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I + G + ++ +G + ++G N QLG D+E P I++ +
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGIRI 174
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +ACG
Sbjct: 175 KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGW 233
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNS 387
+ ++ G LY +G QLG+G +D L S
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTS 293
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++ W
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 448 GMGNGYQLGNGKEDD-----ILEPMKIEG 471
G G QLG G+ D I+E + ++G
Sbjct: 353 GRGTNGQLGIGESLDRNFPKIIEALSVDG 381
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
++ ++++G HS+AL S + ++GR + G+LG + + ++ PT + +L D I S+
Sbjct: 15 RRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLS-PTQLSALDDHQIVSVT 73
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A S ++Y++G D+GRLG N S+
Sbjct: 74 CGADHTVAYS-------------------------ESRMEVYSWGWGDFGRLGHGNSSDL 108
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 109 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTE 189
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 33/273 (12%)
Query: 37 GVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G+ GQLGLG D + + E + + V G HT +TEDG +Y WG
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D +P+ V +K ++ G H++++ G +Y +G + +G
Sbjct: 198 WGRYGNLGLGDRND-RLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSK--YG 254
Query: 153 SMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G P KLE++ S I +I+ G H + LTS G L G + GQ+G
Sbjct: 255 QLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVG----- 309
Query: 211 SASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ P +V + + + V G +T ++ + ++ A+G QLG
Sbjct: 310 -----VGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG--- 361
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ +S + F P +I++LS ASGQH
Sbjct: 362 --IGESLDRNF--PKIIEALSVDG----ASGQH 386
>gi|94469124|gb|ABF18411.1| regulator of chromosome condensation-like protein [Aedes aegypti]
Length = 216
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 83/114 (72%), Gaps = 2/114 (1%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL+CGQG+ GQLGLG DVME+ AL++ L +VE+ GGMH +CL G+VY++GCN
Sbjct: 40 GNVLSCGQGEVGQLGLGEDVMEKTRPALIDSLKEIVEISAGGMHNLCLNRKGEVYSFGCN 99
Query: 97 DEGALGREA--EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
DEGALGR E SEF P+ + LP ++ISAGDSHS LL DG VYAWGSFR
Sbjct: 100 DEGALGRATADEEGSEFEPRKIQLPAPCLKISAGDSHSACLLNDGRVYAWGSFR 153
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++L+ G QLG + ++K+ P LI SL K+ +++G H+L LN +G
Sbjct: 40 GNVLSCGQGEVGQLGLGEDVMEKT------RPALIDSL--KEIVEISAGGMHNLCLNRKG 91
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y+FG +D G LG E +E P I+ G+ S + ++G +Y WG
Sbjct: 92 EVYSFGCNDEGALGRATADEEGSEFEPRKIQLPAPCLKISAGDSHSACLLNDGRVYAWG 150
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
V+ GN+L+ G E GQLG M P + ++ ++ G++N
Sbjct: 34 VLPKPCGNVLSCGQGEVGQLGL---------GEDVMEKTRPALIDSLKEIVEISAGGMHN 84
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ KG + +FG N+ LG A ++ + S F P I+ + +++G HS
Sbjct: 85 LCLNRKGEVYSFGCNDEGALGRATADEEGSE----FEPRKIQLPA--PCLKISAGDSHSA 138
Query: 305 ALNSEGKIYAFG 316
L ++G++YA+G
Sbjct: 139 CLLNDGRVYAWG 150
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL + ++KT P ++S+ IV+I++G H + L +G + + GC ++G LGR T
Sbjct: 51 GQLGLGEDVMEKTRPALIDSLKEIVEISAGGMHNLCLNRKGEVYSFGCNDEGALGRAT 108
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHS 132
V GG ++ L DG +++WG N G LG + F P V+ A +I+AGD+H+
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNHA 1045
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSGIVKIASGADHFVMLTS 189
+AL DG+V++WG +S G +GL G T P K+ ++S + IA G H + +
Sbjct: 1046 LALAPDGSVWSWG--YNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVAR 1103
Query: 190 RGNLLTAGCPEQGQLGRITQRSASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
G+L + G GQLG S + NA ++ + GE Y+
Sbjct: 1104 DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGE--------------YYSL 1149
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ GS+ ++G N+ QLG D+E + TP ++ LS +A+G+ HSLA
Sbjct: 1150 ALTRDGSVWSWGDNSDGQLGLGDNEDRN-------TPQKVEVLS--NVAAIAAGEDHSLA 1200
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +G ++++GR+ G+LGL + + T P P+ ++ I +IA GN SFAI EG+
Sbjct: 1201 LTRDGSVWSWGRNSRGQLGLDDNDDRNT-PQPVTTI--SNIKAIAAGNSHSFAISEEGLA 1257
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ WG QLG G + N E TP +
Sbjct: 1258 WAWGYNYDGQLGIGTSGSLAN--------------------------ENTPQKVKVISNV 1291
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
++ GN S A+ +G L+ WG + Q+G
Sbjct: 1292 VGLSGGNYHSLALTEDGALWAWGDNDDGQIG 1322
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 158/344 (45%), Gaps = 28/344 (8%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G+ D QLGLG D+ R + N+V V G + ++ L DG ++ WG
Sbjct: 84 GDGTVWVWGRNDYNQLGLGDDI-NRLAPEQAPVVSNIVSVAAGRLFSLALASDGSLWAWG 142
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG + D+ P I+ GD H++A + G V+A G R+ HG +
Sbjct: 143 GNYYGQLGM-GDNDNRLTPSKTPGLSDVAAIAGGDYHALAATQSGEVWAMG--RNDHGQL 199
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G G+ P+++ +S + +A+G + L + G + G E QLG A
Sbjct: 200 GFTGD-HADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVA 258
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
+ R+H ++ GS+ A+G N QLG D E K+
Sbjct: 259 TPAPIAVLSNITAIAAGRRHA---------MALAEDGSVWAWGANGSGQLGFGDFETPKA 309
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P + SL+D T +ASG HSLAL S+G ++A+G + GRLG S+ +
Sbjct: 310 -------PGRVSSLAD--VTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQ-SL 359
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLG 377
P + S+ + S A G S AI ++G ++ WG GN Y QLG
Sbjct: 360 PAQVSSISNA--VSFAGGQRHSLAIAADGSVWSWG-GNAYGQLG 400
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 25/316 (7%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG--DSEFIPQTVNLPKKA 122
V+ L ++ G H + L DG V++WG N +G LG + G ++ PQ +N
Sbjct: 1029 VDALPPAAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV 1088
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
I+ G SHS+A+ DG++++WG + +G +GL + TP K+ ++S + IA+G
Sbjct: 1089 AAIACGGSHSLAVARDGSLWSWG--YNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEY 1146
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
+ + LT G++ + G GQLG + RN + + L ++ + G
Sbjct: 1147 YSLALTRDGSVWSWGDNSDGQLG--LGDNEDRNTPQKVEVL---------SNVAAIAAGE 1195
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ ++ GS+ ++G N+ QLG D++ + TP + ++S+ K +A+G
Sbjct: 1196 DHSLALTRDGSVWSWGRNSRGQLGLDDNDDRN-------TPQPVTTISNIK--AIAAGNS 1246
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
HS A++ EG +A+G + G+LG+ E TP + ++ GN S A+
Sbjct: 1247 HSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVISNVVGLSGGNYHSLALTE 1306
Query: 362 EGVLYGWGMGNGYQLG 377
+G L+ WG + Q+G
Sbjct: 1307 DGALWAWGDNDDGQIG 1322
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 178/392 (45%), Gaps = 66/392 (16%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREA-EGDSEFIPQTVNLPKKAVQISAGDSHS 132
V GG ++ L DG V++WG N G LG E D F P V+ A I+AG H+
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHA 556
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSGIVKIASGADHFVMLTS 189
+AL DG+V++WG R+S G +GL G T P K+ ++S + IA G H + L
Sbjct: 557 LALASDGSVWSWG--RNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLALAR 614
Query: 190 RGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
G+ + G GQLG + T R NA + + G+ +H
Sbjct: 615 DGSFWSWGYNYYGQLGLGDNVSKTTPRKV--NALSNVVAMAAGD-----RH--------- 658
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ ++ GS+ ++G N Y QLG D++ + TP + ++S +A+G HS
Sbjct: 659 SLALTLDGSLWSWGDNTYGQLGLGDNDHRN-------TPRKVNAIS--NVVAIAAGYRHS 709
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL +G ++++G + G+LGL + + T P P+ ++ I +IA GN S AI EG
Sbjct: 710 LALTRDGSVWSWGNNTRGQLGLGDNDDRNT-PQPVTTI--SNIKAIAVGNNYSIAISEEG 766
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
+++ WG Y G+LG+ E TP +
Sbjct: 767 LVWAWG----YNCS----------------------GQLGIGTHGSLADENTPQKVIVIS 800
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ ++ G+ S A+ +G L+ WG Q+
Sbjct: 801 NVVGLSAGSSHSIALTEDGALWAWGNNEAGQI 832
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 171/371 (46%), Gaps = 62/371 (16%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGD--SEFIPQTVNLPKKAVQISAGDSHSVALLE 137
H++ L DG V+ WG ND LG GD + P+ + V ++AG S+AL
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGL---GDDINRLAPEQAPVVSNIVSVAAGRLFSLALAS 134
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
DG+++AWG + +G +G+ + TP K +S + IA G H + T G + G
Sbjct: 135 DGSLWAWGG--NYYGQLGMGDNDNRLTPSKTPGLSDVAAIAGGDYHALAATQSGEVWAMG 192
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS----SKGSI 253
+ GQLG + + P++ + +V + F S + G++
Sbjct: 193 RNDHGQLGFTGDHA---------------DAPVQVAGLSNVKSVAAGEFFSLALKNDGTV 237
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
A+G N +QLG + TP I LS T +A+G+ H++AL +G ++
Sbjct: 238 WAWGNNESAQLGTGIA------GEAVATPAPIAVLS--NITAIAAGRRHAMALAEDGSVW 289
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
A+G + G+LG + P P + SL D +T+IA G S A+ S+GVL+ WG
Sbjct: 290 AWGANGSGQLGFGDFETP-KAPGRVSSLAD--VTAIASGWFHSLALTSDGVLWAWGNNGD 346
Query: 374 YQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
+LG D + ++G ++++G + YG+LG+++++
Sbjct: 347 GRLGTDATSDQSLPAQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVESLT- 405
Query: 410 PVTEPTPIPSL 420
P + TP+ +L
Sbjct: 406 PASVLTPVHTL 416
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 25/315 (7%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG--DSEFIPQTVNLPKKA 122
V+ L + GG H + L DG V++WG N G LG G +E PQ +N
Sbjct: 540 VDALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV 599
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
I+ G SHS+AL DG+ ++WG + +G +GL + TP K+ ++S +V +A+G
Sbjct: 600 AAIACGGSHSLALARDGSFWSWG--YNYYGQLGLGDNVSKTTPRKVNALSNVVAMAAGDR 657
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H + LT G+L + G GQLG + RN R ++ + ++ + G
Sbjct: 658 HSLALTLDGSLWSWGDNTYGQLG--LGDNDHRNTPRKVNAI---------SNVVAIAAGY 706
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ ++ GS+ ++G N QLG D++ + TP + ++S+ K +A G +
Sbjct: 707 RHSLALTRDGSVWSWGNNTRGQLGLGDNDDRN-------TPQPVTTISNIK--AIAVGNN 757
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+S+A++ EG ++A+G + G+LG+ E TP + + ++ G+ S A+
Sbjct: 758 YSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTE 817
Query: 362 EGVLYGWGMGNGYQL 376
+G L+ WG Q+
Sbjct: 818 DGALWAWGNNEAGQI 832
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 63/377 (16%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
++AG + S+AL DG++++WG +GL TP K++++ KIA+G +H
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNHA 1045
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---- 240
+ L G++ + G GQLG + + S R P K I +V
Sbjct: 1046 LALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNR-----------PQKINAISNVAAIACG 1094
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ ++ GS+ ++G N Y QLG D N TP + ++S +A+G+
Sbjct: 1095 GSHSLAVARDGSLWSWGYNYYGQLGLGD-------NYSKTTPQKVNAIS--NVAAIAAGE 1145
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
++SLAL +G ++++G + G+LGL + +E P + L + +IA G S A+
Sbjct: 1146 YYSLALTRDGSVWSWGDNSDGQLGLGD-NEDRNTPQKVEVL--SNVAAIAAGEDHSLALT 1202
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
+G ++ W GR+ G+LGL + + T P P+ ++
Sbjct: 1203 RDGSVWSW--------------------------GRNSRGQLGLDDNDDRNT-PQPVTTI 1235
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE---PMKIEGKQLNNY 477
I +IA GN SFAI EG+ + WG QLG G + P K+ K ++N
Sbjct: 1236 --SNIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKV--KVISN- 1290
Query: 478 TVLQVASGGQHSVILAK 494
V+ ++ G HS+ L +
Sbjct: 1291 -VVGLSGGNYHSLALTE 1306
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 225/515 (43%), Gaps = 84/515 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G GQLGLG D +R T V + N+ + VG +++ ++E+G V+ WG N
Sbjct: 716 GSVWSWGNNTRGQLGLG-DNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAWGYN 774
Query: 97 DEGALGREAEGD--SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG G E PQ V + V +SAG SHS+AL EDG ++AWG+ + G +
Sbjct: 775 CSGQLGIGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGALWAWGN--NEAGQI 832
Query: 155 GLKGEGIQ--KTPLKLESVSGIVKI-----ASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ E I+ P+++ + + A GAD + L CP L
Sbjct: 833 AAE-EAIEYIDNPVQVFQSGEVFHLYFDVDADGAD---------DELYDNCP---SLYNP 879
Query: 208 TQRSASRNARRGM-----SFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL---- 258
Q + + + PG+ + D +T + +G+ GL
Sbjct: 880 AQEDQDGDGPGDLCDNCPALYNPGQEDADGDGVGDECDNCPSTANAQQGNEDGDGLGDEC 939
Query: 259 ----NNYSQLGEADSEVQKSGNTC------FFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
++++ L E D + +G+ C FF S M+A+G + SLAL +
Sbjct: 940 DNCPSHFNDLQE-DEDGDGTGDFCDGCPGDFFKSQPGFSGCGNPNPMVAAGGNFSLALKT 998
Query: 309 EGKIYAFGRH-DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++++G + S V PT + +L IA G+ + A+ +G ++
Sbjct: 999 DGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDAL--PPAAKIAAGDNHALALAPDGSVWS 1056
Query: 368 WGMGNGYQLGNG------------KEDDILN---------------SEGKIYAFGRHDYG 400
WG + QLG G K + I N +G ++++G + YG
Sbjct: 1057 WGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVARDGSLWSWGYNYYG 1116
Query: 401 RLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
+LGL N S+ T P + ++ + +IA G S A+ +G ++ WG + QLG G
Sbjct: 1117 QLGLGDNYSK--TTPQKVNAI--SNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGD 1172
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+D P K+E L+N V +A+G HS+ L +
Sbjct: 1173 NEDRNTPQKVE--VLSN--VAAIAAGEDHSLALTR 1203
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 166/377 (44%), Gaps = 63/377 (16%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
++AG S+AL DG+V++WG+ +GL TP ++++ IA+G H
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHA 556
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---- 240
+ L S G++ + G + S + P K I +V
Sbjct: 557 LALASDGSVWSWG-----------RNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACG 605
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ ++ GS ++G N Y QLG D+ V K+ TP + +LS +A+G
Sbjct: 606 GSHSLALARDGSFWSWGYNYYGQLGLGDN-VSKT------TPRKVNALS--NVVAMAAGD 656
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HSLAL +G ++++G + YG+LGL + T P + ++ + +IA G S A+
Sbjct: 657 RHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNT-PRKVNAI--SNVVAIAAGYRHSLALT 713
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
+G ++ WG QLG G DD +N +PVT +
Sbjct: 714 RDGSVWSWGNNTRGQLGLGDNDD---------------------RNTPQPVTTIS----- 747
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE---PMKIEGKQLNNY 477
I +IA GN S AI EG+++ WG QLG G + + P K+ +
Sbjct: 748 ---NIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKV----IVIS 800
Query: 478 TVLQVASGGQHSVILAK 494
V+ +++G HS+ L +
Sbjct: 801 NVVGLSAGSSHSIALTE 817
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 190/476 (39%), Gaps = 59/476 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G V G+ D GQLG D + V L NV V G ++ L DG V+ W
Sbjct: 183 TQSGEVWAMGRNDHGQLGFTGDHADAPV--QVAGLSNVKSVAAGEFFSLALKNDGTVWAW 240
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G N+ LG G++ P + + I+AG H++AL EDG+V+AWG+ + G
Sbjct: 241 GNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGA--NGSGQ 298
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+G K P ++ S++ + IASG H + LTS G L G G+LG S
Sbjct: 299 LGFGDFETPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQS 358
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
P +V + ++ I++ GS+ ++G N Y QLG V+
Sbjct: 359 L----------PAQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG-----VES 403
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG----KIYAFGRHDYGRLGLKNVS 329
TP L SG+ L +++G I+ G L +
Sbjct: 404 LTPASVLTP----------VHTLYSGEDFHLFYDTDGDGAANIWDDDDDGDGFLDESDNC 453
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
V+ P +D T C C + G G N G L ++G
Sbjct: 454 PCVSNPG--QEDEDGDGTGDFCDGCPGDFFKIQPGFSGCGNPNPMVAAGGGFSLALKTDG 511
Query: 390 KIYAFGRHDYGRLGLKNV-SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
++++G + G+LGL ++ V PT + +L SIA G + A+ S+G ++ WG
Sbjct: 512 SVWSWGNNGSGQLGLGLGENDDVFTPTNVDAL--PLAASIAAGGGHALALASDGSVWSWG 569
Query: 449 MGN----------GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ Y N P KI V +A GG HS+ LA+
Sbjct: 570 RNSVGQLGLGTGGTYSTEN-------RPQKINAIS----NVAAIACGGSHSLALAR 614
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 40/227 (17%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGN 353
M+AS HSLAL +G ++ +GR+DY +LGL +++ E P+ S I S+A G
Sbjct: 71 MVASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGR 126
Query: 354 CVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDIL------------------------NSE 388
S A+ S+G L+ WG GN Y QLG G D+ L
Sbjct: 127 LFSLALASDGSLWAWG-GNYYGQLGMGDNDNRLTPSKTPGLSDVAAIAGGDYHALAATQS 185
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G+++A GR+D+G+LG + P + L + S+A G S A+ ++G ++ WG
Sbjct: 186 GEVWAMGRNDHGQLGF--TGDHADAPVQVAGL--SNVKSVAAGEFFSLALKNDGTVWAWG 241
Query: 449 MGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QLG G + + P I L+N T +A+G +H++ LA+
Sbjct: 242 NNESAQLGTGIAGEAVATPAPI--AVLSNITA--IAAGRRHAMALAE 284
>gi|402217324|gb|EJT97405.1| RCC1/BLIP-II [Dacryopinax sp. DJM-731 SS1]
Length = 470
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 194/430 (45%), Gaps = 96/430 (22%)
Query: 39 VLTCGQGDTGQLGLGPDVM-ERKTFALVEDLDNVVE-------------VVVGGMHTVCL 84
+ G G+ QLGLG D++ E + L + +E GGMHT+ +
Sbjct: 18 LFIFGNGEMAQLGLGVDMLDEIRRPKLHTWFEEAIEEGRLGGAGAGIEKACTGGMHTLVI 77
Query: 85 TEDGKVYTWGCNDEGALGR--------EAEGD----------SEFIPQTVNLPKKAVQIS 126
E G++++WG ND +LGR +A G+ + V+ +AV ++
Sbjct: 78 DEMGRIWSWGVNDNASLGRLTANVPIPDAPGEFFQTEVLETQPMLVQSLVDEGFRAVTVA 137
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE----GIQKTPLKLESV--SGIVKIASG 180
AGDS SVAL DG + WGSFR S G +G G Q TP +E + +A G
Sbjct: 138 AGDSISVALDVDGQLRCWGSFRSSDGLLGFDGRLGSAQQQFTPAPIEDFRKEKFISLACG 197
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
DH + LT+ G + G +Q QLGR RR + L P ++ LK+ + V +
Sbjct: 198 TDHVLALTTDGRVWVWGNGQQAQLGRKIIE------RRKTNALRPEKLALKK--VVAVGS 249
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKS-----LSDKKF 293
G Y++F I KG + A+GLN+ Q G A + G+ T P +++ L+ +K
Sbjct: 250 GSYHSFAIDVKGRVFAWGLNSMKQTGVA---AEDGGSEDIITAPTEVRALHPDQLNGEKV 306
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--------------------KNVSEPVT 333
++ G+HH+L L S+G++YA GR D LG+ ++ V
Sbjct: 307 IQISGGEHHTLFLVSDGRVYACGRSDGFELGIGPVESLQDVNGDHVMSSEDQSHMRAYVA 366
Query: 334 EPT-----PIPSLQD---------------KTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
PT P+P+ ++ ++S+ G + A+ G +Y WG GN
Sbjct: 367 VPTLVAFPPVPTPEEMNPDVPEGPPAIPPINPVSSVHAGTHHNLAVSRAGYVYSWGTGNQ 426
Query: 374 YQLGNGKEDD 383
QLG G E++
Sbjct: 427 SQLGLGNEEE 436
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 159/411 (38%), Gaps = 88/411 (21%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+GI K +G H +++ G + + G + LGR+T +A F + + +
Sbjct: 62 AGIEKACTGGMHTLVIDEMGRIWSWGVNDNASLGRLTANVPIPDAPG--EFFQTEVLETQ 119
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF----------FT 281
+ + + + G ++ L+ QL S G F FT
Sbjct: 120 PMLVQSLVDEGFRAVTVAAGDSISVALDVDGQLRCWGSFRSSDGLLGFDGRLGSAQQQFT 179
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P I+ +KF LA G H LAL ++G+++ +G +LG K + T L
Sbjct: 180 PAPIEDFRKEKFISLACGTDHVLALTTDGRVWVWGNGQQAQLGRKIIERRKTNALRPEKL 239
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED------------------D 383
K + ++ G+ SFAID +G ++ WG+ + Q G ED D
Sbjct: 240 ALKKVVAVGSGSYHSFAIDVKGRVFAWGLNSMKQTGVAAEDGGSEDIITAPTEVRALHPD 299
Query: 384 ILN------------------SEGKIYAFGRHDYGRLGL--------------------K 405
LN S+G++YA GR D LG+
Sbjct: 300 QLNGEKVIQISGGEHHTLFLVSDGRVYACGRSDGFELGIGPVESLQDVNGDHVMSSEDQS 359
Query: 406 NVSEPVTEPT-----PIPSLQD---------------KTITSIACGNCVSFAIDSEGVLY 445
++ V PT P+P+ ++ ++S+ G + A+ G +Y
Sbjct: 360 HMRAYVAVPTLVAFPPVPTPEEMNPDVPEGPPAIPPINPVSSVHAGTHHNLAVSRAGYVY 419
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
WG GN QLG G E++ P ++ K + + + +GGQH + LA PK
Sbjct: 420 SWGTGNQSQLGLGNEEEAERPTRLRYKDGDKWFIRSAGAGGQHCIFLATPK 470
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV---------- 411
EG L G G G G +++ G+I+++G +D LG + P+
Sbjct: 54 EGRLGGAGAGIEKACTGGMHTLVIDEMGRIWSWGVNDNASLGRLTANVPIPDAPGEFFQT 113
Query: 412 ----TEPTPIPSLQDKTI--TSIACGNCVSFAIDSEGVLYGWG--------MGNGYQLGN 457
T+P + SL D+ ++A G+ +S A+D +G L WG +G +LG+
Sbjct: 114 EVLETQPMLVQSLVDEGFRAVTVAAGDSISVALDVDGQLRCWGSFRSSDGLLGFDGRLGS 173
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
++ P IE + + + +A G H + L
Sbjct: 174 AQQQ--FTPAPIEDFRKEKF--ISLACGTDHVLAL 204
>gi|17532079|ref|NP_495753.1| Protein RAN-3 [Caenorhabditis elegans]
gi|38257921|sp|Q18211.1|RCC1_CAEEL RecName: Full=Regulator of chromosome condensation; AltName:
Full=Cell cycle regulatory protein; AltName: Full=RCC1
homolog
gi|3874508|emb|CAA91119.1| Protein RAN-3 [Caenorhabditis elegans]
Length = 569
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 185/384 (48%), Gaps = 39/384 (10%)
Query: 36 GGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+CG+G+ G G RK E+ ++ V GG+H+ LT +G+VY G
Sbjct: 151 GDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCG 210
Query: 95 CNDEG---ALGREAEGDS-EF----IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
N++G A G E EG + EF + + K V ++AG S + AL + G+V AWG+
Sbjct: 211 INEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGN 270
Query: 147 FRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R+S+G++ + +Q+ P+ + ++ IVKIA+G +H VML +G LLT G E G
Sbjct: 271 LRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMG 330
Query: 203 QLGRITQRSASRNARRGMSFLEPGE---VPLKRKHIDDVF---------TGVYNTFISSK 250
QLGR S ++ R E G+ VPL+ KH F +G +
Sbjct: 331 QLGR---SSRTKTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGED 387
Query: 251 GSILAFGLNNYSQLG----EAD--SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
G AFGLNNY+QLG EAD + Q + F P + ++ + G H +
Sbjct: 388 GKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVV 447
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP----TPIPSLQ-DKTITSIACGNCVSFAI 359
L S+GK++A G++ LGL N + + I ++ D I ++ S A
Sbjct: 448 ILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAW 507
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+G Y WG QLG G +D+
Sbjct: 508 SEDGTAYAWGFDTTGQLGLGLKDE 531
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 173/414 (41%), Gaps = 72/414 (17%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEGIQKTPLK------LESVSG 173
K +Q AG HS L +G VY G + + + + G++ EG K +E
Sbjct: 186 KPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGK 245
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL--- 230
IV +A+GA LT +G+++ G R+++ N + E P+
Sbjct: 246 IVMLAAGASFTAALTDQGSVIAWG----------NLRNSNGNVDVHPLLHKMQEAPVVIV 295
Query: 231 ---KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFT-PHLI 285
KRK + + + KG +L FG QLG + ++ +S C + HL+
Sbjct: 296 HQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLL 355
Query: 286 KSLSDK---KF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
L K KF + ASG ++ +GK YAFG ++Y +LG+K V E
Sbjct: 356 VPLRFKHKGKFFDVVAKNVFASG-FWTIVHGEDGKYYAFGLNNYAQLGIK-----VDEAD 409
Query: 337 PIPSLQDKTITSI-------ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
QD + A G +F ++ EGV + IL S+G
Sbjct: 410 VGQDGQDNRELRVFLPAEAPAFGAERTF-VNIEGVQHVV---------------ILGSDG 453
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEP----TPIPSLQ-DKTITSIACGNCVSFAIDSEGVL 444
K++A G++ LGL N + + I ++ D I ++ S A +G
Sbjct: 454 KVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTA 513
Query: 445 YGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Y WG QLG G +D+ + +P +I L+ Y+++ + QH++I+AK
Sbjct: 514 YAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAK 567
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
R+ ++ R+ F E G PL+ V GV++ ++S+G + G+N + G +
Sbjct: 168 RTTTKKPRKVDIFEEEGLKPLQA-----VAGGVHSAVLTSEGEVYMCGIN---EKGTVPA 219
Query: 270 E-VQKSGNTCFFTPHLIKSLSDK--KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG 324
E V+K G+T F + +K K MLA+G + AL +G + A+G R+ G +
Sbjct: 220 EGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVD 279
Query: 325 LKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + + E P I + I IA G +D +G L +G G QLG
Sbjct: 280 VHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTK 339
Query: 384 ILNS-------------------------------------------EGKIYAFGRHDYG 400
+ S +GK YAFG ++Y
Sbjct: 340 TIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYA 399
Query: 401 RLGLK 405
+LG+K
Sbjct: 400 QLGIK 404
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 228/483 (47%), Gaps = 62/483 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + R+ V L VV V GG H++ + DG V+ WG N
Sbjct: 29 GTVWAVGGNSVGQLGDGTTSL-RRVPVRVLGLSGVVTVAAGGGHSLAVHSDGTVWAWGNN 87
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + D+ P V V ++AG HS+A+ DGTV+AWG+ +S G +G
Sbjct: 88 SSGQLG-DGSFDNRAEPVRVRGLSGVVAVAAGGYHSLAVSADGTVWAWGN--NSSGQLGD 144
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P+++ SG+V +A+G H + + S G L G GQLG + ++S
Sbjct: 145 GSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSS--- 201
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
EP +V L+ V G ++ +S+ G++ A+G N++ QLG A +
Sbjct: 202 -------EPVQV-LRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGIART------ 247
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P + + + +A+G +HSLA+ +G ++A+G + +G+LG + + +EP
Sbjct: 248 TPLLSIPGRVPEV--RGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDN-SEP 304
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------- 384
+P L+ + ++A G+ S A+ +G ++ WG Q G+G +
Sbjct: 305 GRVPGLEG--VGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRVPGVSG 362
Query: 385 -------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITSIA 429
++++G +A+G + +G LG + T +P P D K + ++A
Sbjct: 363 VVGVAANVFHSLAVSADGSAWAWGHNSHGELG-----DGSTRNSPAPVRVDGLKEVVAVA 417
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G+ S A+ ++G + WG QLG+G P ++ G + V+ VA+G HS
Sbjct: 418 AGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLR----GVVAVAAGSSHS 473
Query: 490 VIL 492
+ L
Sbjct: 474 LAL 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 218/484 (45%), Gaps = 64/484 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G R V L VV V GG H++ ++ DG V+ WG N
Sbjct: 79 GTVWAWGNNSSGQLGDG-SFDNRAEPVRVRGLSGVVAVAAGGYHSLAVSADGTVWAWGNN 137
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + D+ P V V ++AG +HS+A+ DG ++AWG + +G +G
Sbjct: 138 SSGQLG-DGSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGD--NLYGQLGN 194
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+GE P+++ V+G V +++GA+H + +++ G + G GQLG A
Sbjct: 195 RGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGI---------A 245
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA----DSEVQ 272
R PG VP R + ++ + G++ A+G N + QLG +SE
Sbjct: 246 RTTPLLSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSE-- 303
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P + L + +A+G +HSLA+ +G ++A+G + G+ G +
Sbjct: 304 ---------PGRVPGL--EGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQ-- 350
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
P + +A S A+ ++G + WG + +LG+G +
Sbjct: 351 -LSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRNSPAPVRVDG 409
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
L ++G + A+G + +G+LG + P + L + + ++
Sbjct: 410 LKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLG-DGTRASHSVPAQVRGL--RGVVAV 466
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
A G+ S A+ ++G ++ WG QLG+G EP+ ++G + V+ VA+GG H
Sbjct: 467 AAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTYRYEPVAVKGLE----GVVAVAAGGNH 522
Query: 489 SVIL 492
S+ +
Sbjct: 523 SLAV 526
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 205/450 (45%), Gaps = 65/450 (14%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V V G H++ ++ DG V+ WG N G LG IP V + +V ++AGD+H
Sbjct: 213 VTVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAGDNH 272
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+A+ +DGTV+AWGS + HG +G P ++ + G+ +A+G++H + + G
Sbjct: 273 SLAVRDDGTVWAWGS--NGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDDG 330
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF----I 247
+ G +GQ G T S P + + V N F +
Sbjct: 331 TVWAWGSNVEGQRGDGTTGQLS--------------APTRVPGVSGVVGVAANVFHSLAV 376
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S+ GS A+G N++ +LG+ + +P ++ K+ +A+G HSLAL
Sbjct: 377 SADGSAWAWGHNSHGELGDGSTR---------NSPAPVRVDGLKEVVAVAAGSSHSLALL 427
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
++G + A+G + +G+LG + P + L + + ++A G+ S A+ ++G ++
Sbjct: 428 ADGTVLAWGDNTFGQLG-DGTRASHSVPAQVRGL--RGVVAVAAGSSHSLALLADGTVWT 484
Query: 368 WGMGNGYQLGN------------------------GKEDDILNSEGKIYAFGRHDYGRLG 403
WG QLG+ G + S+G +A+G + G+LG
Sbjct: 485 WGYNLNGQLGDGTTTYRYEPVAVKGLEGVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLG 544
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
++ + P P+ + A G +S A+ S+G + WG + QLG+G
Sbjct: 545 DGTLT---SRPAPVEVKAAAKAVAAAQG--LSLAVGSDGFPWAWGNNSSGQLGDGSTTSR 599
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
PM+++G V+ VA+G HS+ L+
Sbjct: 600 PMPMRVQGAG----EVVAVAAGNGHSLALS 625
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 207/447 (46%), Gaps = 59/447 (13%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF--IPQTVNLPKKAVQISAGD 129
+ GG H++ + +DG V+ G N G LG +G + +P V V ++AG
Sbjct: 13 ARIATGGSHSLSVHQDGTVWAVGGNSVGQLG---DGTTSLRRVPVRVLGLSGVVTVAAGG 69
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
HS+A+ DGTV+AWG+ +S G +G + P+++ +SG+V +A+G H + +++
Sbjct: 70 GHSLAVHSDGTVWAWGN--NSSGQLGDGSFDNRAEPVRVRGLSGVVAVAAGGYHSLAVSA 127
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
G + G GQLG S + R EP V + G ++ + S
Sbjct: 128 DGTVWAWGNNSSGQLG-----DGSFDNR-----AEPVRVRGSSGVVAVAAGGAHSLAVRS 177
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + A+G N Y QLG F + ++ L +++G +HSLA++++
Sbjct: 178 DGILWAWGDNLYGQLGNRGE---------FNSSEPVQVLRVTGGVTVSAGANHSLAVSAD 228
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++A+G + +G+LG+ + ++ P +P ++ ++A G+ S A+ +G ++ WG
Sbjct: 229 GTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGS--VAMAAGDNHSLAVRDDGTVWAWG 286
Query: 370 ------MGNGYQLGNGKEDDI------------------LNSEGKIYAFGRHDYGRLGLK 405
+GNG+ + N + + + +G ++A+G + G+ G
Sbjct: 287 SNGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDG 346
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ P + +A S A+ ++G + WG + +LG+G +
Sbjct: 347 TTGQ---LSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRNSPA 403
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVIL 492
P++++G + V+ VA+G HS+ L
Sbjct: 404 PVRVDGLK----EVVAVAAGSSHSLAL 426
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 190/435 (43%), Gaps = 57/435 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +++ V L+ V V G H++ + +DG V+ WG N
Sbjct: 280 GTVWAWGSNGHGQLGNG-FMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSN 338
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EG G G P V V ++A HS+A+ DG+ +AWG +SHG +G
Sbjct: 339 VEGQRGDGTTGQLS-APTRVPGVSGVVGVAANVFHSLAVSADGSAWAWG--HNSHGELGD 395
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P++++ + +V +A+G+ H + L + G +L G GQLG T+ S S
Sbjct: 396 GSTRNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHS--- 452
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P +V R + ++ + + G++ +G N QLG+ +
Sbjct: 453 -------VPAQVRGLRGVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTT------- 498
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
T + P +K L + +A+G +HSLA+ S+G +A+G + G+LG ++ + P
Sbjct: 499 TYRYEPVAVKGL--EGVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLT---SRPA 553
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
P+ + A G +S A+ S+G + WG + QLG+G
Sbjct: 554 PVEVKAAAKAVAAAQG--LSLAVGSDGFPWAWGNNSSGQLGDGST--------------- 596
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ P P+ + ++A GN S A+ EG ++ WG QLG
Sbjct: 597 --------------TSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLG 642
Query: 457 NGKEDDILEPMKIEG 471
G D L P +++G
Sbjct: 643 EGTLDRRLAPTRVQG 657
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 70/380 (18%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ +I+ G SHS+++ +DGTV+A G +S G +G +++ P+++ +SG+V +A+
Sbjct: 10 RAPARIATGGSHSLSVHQDGTVWAVGG--NSVGQLGDGTTSLRRVPVRVLGLSGVVTVAA 67
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + + S G + G GQLG SF E P++ + + V
Sbjct: 68 GGGHSLAVHSDGTVWAWGNNSSGQLGD-------------GSFDNRAE-PVRVRGLSGVV 113
Query: 240 T----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
G ++ +S+ G++ A+G N+ QLG+ + + ++
Sbjct: 114 AVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNRA---------EPVRVRGSSGVVA 164
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G HSLA+ S+G ++A+G + YG+LG + N SEPV L+ +++ G
Sbjct: 165 VAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQV------LRVTGGVTVSAG 218
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
S A+ ++G ++ W G + +G+LG+ + ++
Sbjct: 219 ANHSLAVSADGTVWAW--------------------------GDNSHGQLGIARTTPLLS 252
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P +P ++ ++A G+ S A+ +G ++ WG QLGNG D EP ++ G
Sbjct: 253 IPGRVPEVRGS--VAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGL 310
Query: 473 QLNNYTVLQVASGGQHSVIL 492
+ V VA+G HS+ +
Sbjct: 311 E----GVGAVAAGSNHSLAV 326
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G + A V+ L+ VV V GG H++ + DG + WG N
Sbjct: 480 GTVWTWGYNLNGQLGDGTTTYRYEPVA-VKGLEGVVAVAAGGNHSLAVRSDGTAWAWGEN 538
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+G LG +G P V + A ++A S+A+ DG +AWG+ +S G +G
Sbjct: 539 VKGQLG---DGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGN--NSSGQLGD 593
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P++++ +V +A+G H + L+ G + G +GQLG T
Sbjct: 594 GSTTSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLD------ 647
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
RR L P V + G ++ + GS+ ++G N + QLG A
Sbjct: 648 RR----LAPTRVQGLSGVVAVAAGGAFSLAVRDDGSVWSWGDNAFGQLGNA 694
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
++ +G ++A G + G+LG S P+ L + ++A G S A+ S+G +
Sbjct: 25 VHQDGTVWAVGGNSVGQLGDGTTS---LRRVPVRVLGLSGVVTVAAGGGHSLAVHSDGTV 81
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ WG + QLG+G D+ EP+++ G V+ VA+GG HS+ ++
Sbjct: 82 WAWGNNSSGQLGDGSFDNRAEPVRVRGLS----GVVAVAAGGYHSLAVSA 127
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 183/387 (47%), Gaps = 30/387 (7%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
++ + + P ++V + S G VV + G+G+ GQLG G D +R
Sbjct: 1 MEDEVMSEVAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHG-DTDDRLFPTK 59
Query: 65 VEDLD--NVVEVVVGGMHTVCLTEDGK-VYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
+ LD +++ V G HT+ +E G+ VY+WG D G LG D IP + +
Sbjct: 60 LSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDL-LIPHPIKALQG 118
Query: 122 AV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-I 177
+ QI+ GDSH +A+ D V +WG R+ +G +GL P K++ I +K +
Sbjct: 119 LMIQQIACGDSHCLAVTMDSQVLSWG--RNQNGELGLGTAEDSLLPQKIQIFEEIPIKMV 176
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
A+GA+H V +T GNL G G LG RN R L P +V + +
Sbjct: 177 AAGAEHSVAITKDGNLYGWGWGRYGNLGL-----GDRNDR-----LLPEKVTVDGDKMAM 226
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G +T +SS G + G Y QLG D E P +++LSDK + +
Sbjct: 227 VACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDH-------LVPRKVQALSDKFISQV 279
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
+ G HS+AL S G++ +G + +G++G+ N + P + D+ + I+CG +
Sbjct: 280 SGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFD-CCSPMQVNFPHDQKVQMISCGWRHT 338
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD 383
A+ +Y WG G QLGNG+ D
Sbjct: 339 IAVTERENVYSWGRGANGQLGNGETID 365
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 61/421 (14%)
Query: 108 DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
+ E + + P++ + +SAG SHSVALL V +WG R G +G + P K
Sbjct: 2 EDEVMSEVAAPPRRVLLVSAGASHSVALLSGNVVCSWG--RGEDGQLGHGDTDDRLFPTK 59
Query: 168 LESVSG--IVKIASGADHFVMLTSRG-NLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
L ++ G I+ + GADH + + G ++ + G + G+LG L
Sbjct: 60 LSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSD----------LLI 109
Query: 225 PGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
P + L+ I + G + ++ +L++G N +LG +E P
Sbjct: 110 PHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDS-------LLP 162
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
I+ + M+A+G HS+A+ +G +Y +G YG LGL + ++ + P +
Sbjct: 163 QKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLL-PEKVTVDG 221
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------- 383
DK + +ACG + + S G LY G G QLG+G +D
Sbjct: 222 DK-MAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVS 280
Query: 384 -------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
L S G++ +G + +G++G+ N + P + D+ + I+CG +
Sbjct: 281 GGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFD-CCSPMQVNFPHDQKVQMISCGWRHTI 339
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
A+ +Y WG G QLGNG+ D P IE ++ S GQH + +KP
Sbjct: 340 AVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVD-------GSSGQH-IESSKPY 391
Query: 497 P 497
P
Sbjct: 392 P 392
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
Length = 1413
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 231/524 (44%), Gaps = 97/524 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G + GQLG G T V L +V+ V HT+ L DG V+TWG N
Sbjct: 810 GTVWAWGHNEGGQLGDGT-TTNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRN 868
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + Q + L + I+ G H++AL DG V+AWG + + +G
Sbjct: 869 IYGQLGDGSTTERSLPVQVIGL-TDVIAIAGGYYHTIALKSDGAVWAWG--YNGNNQLGN 925
Query: 157 KGEGIQKTPLK-----LESVSGIVKI----------------------ASGADHFVMLTS 189
TP++ + SV+ I A+ F TS
Sbjct: 926 WSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTAWFDYGTS 985
Query: 190 RGNLL--TAGCP-------EQGQLGRIT------QRSASRNARRGMSFLEPGEVPLKRKH 234
G TA P LG +T R A++N+R G+S+ + L R
Sbjct: 986 SGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSR-GISYGSE-TIFLPRSQ 1043
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I G Y+T + G++ A G N QLG+ + + +S TP + L+D
Sbjct: 1044 IS---AGAYHTLTLKPDGTVWACGANWNGQLGDG-TTINRS------TPVQVSGLTD--V 1091
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A G +H++AL S+ ++A+G + YG+LG ++ + PTP+ L + I +IA G
Sbjct: 1092 IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNR-SIPTPVTYLTN--IIAIAGGY 1148
Query: 354 CVSFAIDSEGVLYGWGMGNGY-QLGNGKEDD------------------------ILNSE 388
+ A+ S+G ++ WG NGY QLG+G + L S+
Sbjct: 1149 VHTIALKSDGTVWAWGY-NGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSD 1207
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G ++A+G + YG+LG + + T P + L D + +IA G + A+ S+G ++ WG
Sbjct: 1208 GTVWAWGYNGYGQLGDGSTTNRST-PVQVSGLTD--VIAIAGGYVHTIALKSDGTVWTWG 1264
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
N QLG+G + L P+++ G + +A G H++ L
Sbjct: 1265 WNNSGQLGDGTTINRLTPVQVSGLT----DAIAIAGGDYHTIAL 1304
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 195/415 (46%), Gaps = 67/415 (16%)
Query: 108 DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
++ F+P+T QISAG H++ L DGTV+A+G+ +S +G TP++
Sbjct: 587 ETTFMPRT--------QISAGAYHTLTLKPDGTVWAYGANWNSQ--LGDGSTTDSSTPVQ 636
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
+ ++ + IA G H + L S G + T G GQLG T + S
Sbjct: 637 VSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRS-------------- 682
Query: 228 VPLKRKHIDDVFT---GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
P++ + DV G Y+T + S G++ +G N Y QLG + + TP
Sbjct: 683 TPVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS-------TPV 735
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+K L+D +A G HS+AL S+G ++A+G + YG+LG + ++ +T P + L D
Sbjct: 736 QVKGLAD--IIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLT-PVQVSGLTD 792
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
I +IA G + A+ S+G ++ WG G QLG+G +
Sbjct: 793 --IIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDVIAVTARL 850
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
L S+G ++ +GR+ YG+LG + +E + P + L D + +IA G + A+
Sbjct: 851 YHTIALKSDGTVWTWGRNIYGQLGDGSTTER-SLPVQVIGLTD--VIAIAGGYYHTIALK 907
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
S+G ++ WG QLGN + P++ +N+ T V +G V L+
Sbjct: 908 SDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSS 962
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 220/537 (40%), Gaps = 123/537 (22%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG R T V L +V+ + G HT+ L DG V+ WG N
Sbjct: 162 GAVWTWGANWNGQLG-DESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNN 220
Query: 97 DEGALGR-------------------------------------EAEGDSE--------- 110
+ G LG A GD+E
Sbjct: 221 EGGQLGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGST 280
Query: 111 ---FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
IP V + I+ G++H++AL DGTV+AWG + G +G + TP+K
Sbjct: 281 TNRSIPVKVGGLSDVIAIAGGNAHTIALKSDGTVWAWGD--NEGGQLGDGSTTNRSTPVK 338
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEP 225
+ ++ ++ IA G H ++L S G + T G E GQL G T RS
Sbjct: 339 VSGLADVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRS-------------- 384
Query: 226 GEVPLKRKHIDDVFT---GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
P++ + DV GVY+T + S G++ A+G N Y QLG+ + + S T
Sbjct: 385 --TPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDG-TTINSS------T 435
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEP-TP 337
P + L+D +A G +H++A+ S+G ++ +G + YG+LG + N S P +
Sbjct: 436 PVQVNGLTD--VIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSG 493
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG--------YQLGNGKEDDILNS-- 387
+ S+ T+T+ CVS S +L GW GNG Y G D +
Sbjct: 494 MKSVATPTVTT-GSATCVSL---SSALLNGWVNGNGVATTAWFDYGTSTGMYFDATKTIS 549
Query: 388 --EGKIYAFGRHD--------YGRLGLKNVSEPV--TEPTPIPSLQDKTITSIACGNCVS 435
G Y Y R+ +N+ +E T +P Q I+ G +
Sbjct: 550 CGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQ------ISAGAYHT 603
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ +G ++ +G QLG+G D P+++ G + +A G H++ L
Sbjct: 604 LTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT----DAIAIAGGVYHTIAL 656
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 179/395 (45%), Gaps = 50/395 (12%)
Query: 1 MTHLLKKVLRKQAENP------SQKVF-----VTSEAVPTLKCKTGGGVVLTCGQGDTGQ 49
+T R A+N S+ +F +++ A TL K G V CG GQ
Sbjct: 1012 LTPWTTYYYRIAAQNSRGISYGSETIFLPRSQISAGAYHTLTLKPDG-TVWACGANWNGQ 1070
Query: 50 LGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS 109
LG G + R T V L +V+ + G HT+ L D V+ WG N G LG + +
Sbjct: 1071 LGDGTTI-NRSTPVQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG-DGTITN 1128
Query: 110 EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
IP V + I+ G H++AL DGTV+AWG + +G +G + TP+++
Sbjct: 1129 RSIPTPVTYLTNIIAIAGGYVHTIALKSDGTVWAWG--YNGYGQLGDGSTTNRSTPVQVS 1186
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGE 227
++ ++ IA H V L S G + G GQL G T RS
Sbjct: 1187 GLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRS---------------- 1230
Query: 228 VPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
P++ + DV V+ + S G++ +G NN QLG+ + + + TP
Sbjct: 1231 TPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDG-TTINR------LTPV 1283
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+ L+D +A G +H++AL S+ ++A+G + YG+LG +T P + L D
Sbjct: 1284 QVSGLTDA--IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLT-PVQVSGLTD 1340
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+IA G+ + A+ S+ ++ WG + QLG+
Sbjct: 1341 A--IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGD 1373
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 160/342 (46%), Gaps = 26/342 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G QLG G + T V L + + + G HT+ L DG V+TWG N
Sbjct: 610 GTVWAYGANWNSQLGDG-STTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWN 668
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ G LG + Q + L + I+ GD H++AL DGTV+ WG + +G +G
Sbjct: 669 NSGQLGDGTTINRSTPVQVIGL-TDVIAIAGGDYHTIALKSDGTVWTWG--FNYYGQLGG 725
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP++++ ++ I+ IA G H + L S G + G GQLG +
Sbjct: 726 GATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGST------- 778
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
L P +V I ++ + S G++ A+G N QLG+ +
Sbjct: 779 ---TDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTT------- 828
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
T TP + L+D + + +H++AL S+G ++ +GR+ YG+LG + +E + P
Sbjct: 829 TNSSTPVQVSGLTD--VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTER-SLPV 885
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+ L D + +IA G + A+ S+G ++ WG QLGN
Sbjct: 886 QVIGLTD--VIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGN 925
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 180/402 (44%), Gaps = 66/402 (16%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
++ G HT+ L DG V+TWG N G LG E+ + P V+ + I+ G H+
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRS-TPVQVSGLTDVIAIAGGAYHT 205
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
+AL DGTV+AWG + G +G + TP+++ ++ ++ IA G H + L S G
Sbjct: 206 IALKSDGTVWAWG--NNEGGQLGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTIALKSDGT 263
Query: 193 LLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTF 246
+ G E G+LG T RS +P+K + DV +
Sbjct: 264 VWAWGDNEGGRLGDGSTTNRS----------------IPVKVGGLSDVIAIAGGNAHTIA 307
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ S G++ A+G N QLG+ S +S TP + L+D +A G H++ L
Sbjct: 308 LKSDGTVWAWGDNEGGQLGDG-STTNRS------TPVKVSGLAD--VIAIAGGYSHTIVL 358
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
S+G ++ +G ++ G+LG + + T P + L D + +IA G + A+ S+G ++
Sbjct: 359 RSDGTVWTWGHNEGGQLGDGSTTNRST-PVQVSGLAD--VIAIAGGVYHTIAVKSDGTMW 415
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
W G + YG+LG + + P + L D +
Sbjct: 416 AW--------------------------GYNWYGQLG-DGTTINSSTPVQVNGLTD--VI 446
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+IA G + A+ S+G ++ WG QLG+G + P +
Sbjct: 447 AIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQ 488
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 34/303 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G ++GQLG G + R T V L +V+ + G HT+ L DG V+TWG N
Sbjct: 660 GTVWTWGWNNSGQLGDGTTI-NRSTPVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFN 718
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG A + P V + I+ G HS+AL DGTV+AWG + +G +G
Sbjct: 719 YYGQLGGGATTNRS-TPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWG--YNGYGQLGD 775
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
TP+++ ++ I+ IA G H + L S G + G E GQLG T ++S
Sbjct: 776 GSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSS--- 832
Query: 217 RRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
P++ + DV +Y+T + S G++ +G N Y QLG+ S +
Sbjct: 833 -----------TPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDG-STTE 880
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVS 329
+S P + L+D +A G +H++AL S+G ++A+G + +LG KN S
Sbjct: 881 RS------LPVQVIGLTD--VIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSS 932
Query: 330 EPV 332
PV
Sbjct: 933 TPV 935
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 186/391 (47%), Gaps = 69/391 (17%)
Query: 110 EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKL 168
+ +T+ LP+ QISAG H++ L DGTV+A G+ + +G +G G I + TP+++
Sbjct: 1031 SYGSETIFLPRS--QISAGAYHTLTLKPDGTVWACGA--NWNGQLG-DGTTINRSTPVQV 1085
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPG 226
++ ++ IA G H + L S + G GQL G IT RS
Sbjct: 1086 SGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRS--------------- 1130
Query: 227 EVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
+P ++ ++ V+ + S G++ A+G N Y QLG+ S +S TP
Sbjct: 1131 -IPTPVTYLTNIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDG-STTNRS------TP 1182
Query: 283 HLIKSLSDKKFTMLASGQH-HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
+ L+D + +G++ H++AL S+G ++A+G + YG+LG + + T P + L
Sbjct: 1183 VQVSGLTD---VIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRST-PVQVSGL 1238
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-------------EDDI---- 384
D + +IA G + A+ S+G ++ WG N QLG+G D I
Sbjct: 1239 TD--VIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAIAIAG 1296
Query: 385 -------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L S+ ++A+G + YG+LG +T P + L D +IA G+ + A
Sbjct: 1297 GDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLT-PVQVSGLTDA--IAIAGGDYHTIA 1353
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ S+ ++ WG + QLG+ + L P +
Sbjct: 1354 LKSDNTVWAWGSNSYGQLGDVSTANSLTPAQ 1384
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 25/318 (7%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V G GQLG G + R V L N++ + G +HT+ L DG V+ WG N
Sbjct: 1110 VWAWGSNSYGQLGDGT-ITNRSIPTPVTYLTNIIAIAGGYVHTIALKSDGTVWAWGYNGY 1168
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
G LG + + P V+ + I+ H+VAL DGTV+AWG + +G +G
Sbjct: 1169 GQLG-DGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSDGTVWAWG--YNGYGQLGDGS 1225
Query: 159 EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
+ TP+++ ++ ++ IA G H + L S G + T G GQLG T
Sbjct: 1226 TTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTT--------- 1276
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
++ L P +V I + G Y+T + S ++ A+G N+Y QLG+ + + +
Sbjct: 1277 -INRLTPVQVSGLTDAIA-IAGGDYHTIALKSDNTVWAWGSNSYGQLGDG-TTINR---- 1329
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
TP + L+D +A G +H++AL S+ ++A+G + YG+LG + + +T
Sbjct: 1330 --LTPVQVSGLTDA--IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLTPAQC 1385
Query: 338 IPSLQDKTITSIACGNCV 355
+ S T T+I G +
Sbjct: 1386 LLSPIVSTGTAINIGTTM 1403
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 161/347 (46%), Gaps = 65/347 (18%)
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRK 233
+I++GA H + L G + T G GQLG T RS P++
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRS----------------TPVQVS 190
Query: 234 HIDDVFT---GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ DV G Y+T + S G++ A+G N QLG+ S +S TP + L+
Sbjct: 191 GLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDG-STTDRS------TPVQVSGLT 243
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
D +A G H++AL S+G ++A+G ++ GRLG + + + P + L D + +I
Sbjct: 244 D--VIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNR-SIPVKVGGLSD--VIAI 298
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------IL 385
A GN + A+ S+G ++ WG G QLG+G + +L
Sbjct: 299 AGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVL 358
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+G ++ +G ++ G+LG + + T P + L D + +IA G + A+ S+G ++
Sbjct: 359 RSDGTVWTWGHNEGGQLGDGSTTNRST-PVQVSGLAD--VIAIAGGVYHTIAVKSDGTMW 415
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG QLG+G + P+++ G V+ +A G H++ +
Sbjct: 416 AWGYNWYGQLGDGTTINSSTPVQVNGLT----DVIAIAGGYYHTIAM 458
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
Q + + + E V T+ K+ G V G GQLG G R T V L +V
Sbjct: 1184 QVSGLTDVIAIAGEYVHTVALKSDG-TVWAWGYNGYGQLGDG-STTNRSTPVQVSGLTDV 1241
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ + G +HT+ L DG V+TWG N+ G LG + + P V+ A+ I+ GD H
Sbjct: 1242 IAIAGGYVHTIALKSDGTVWTWGWNNSGQLG-DGTTINRLTPVQVSGLTDAIAIAGGDYH 1300
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSR 190
++AL D TV+AWGS +S+G +G G I + TP+++ ++ + IA G H + L S
Sbjct: 1301 TIALKSDNTVWAWGS--NSYGQLG-DGTTINRLTPVQVSGLTDAIAIAGGDYHTIALKSD 1357
Query: 191 GNLLTAGCPEQGQLGRIT 208
+ G GQLG ++
Sbjct: 1358 NTVWAWGSNSYGQLGDVS 1375
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 198/474 (41%), Gaps = 58/474 (12%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
GQLG G A+ V + GG HT T G V+ WG N G LG
Sbjct: 134 GQLGDGSYTTRSTPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTT 193
Query: 108 DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
D LP + I+AGD+H+ A + G V+ WG +++G +G TP+
Sbjct: 194 DRSTPVAVSGLPSEVTAIAAGDAHTCARMSSGEVWCWGG--NNYGQLGDGSYTDSSTPVA 251
Query: 168 LESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF--LE 224
+ + SG+ IA+G H LT G + G GQLG G++F
Sbjct: 252 VSGLPSGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLG------------NGLTFGRST 299
Query: 225 PGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
PG V + + G Y+T ++ G + +G N QLG+ + + TP
Sbjct: 300 PGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARS-------TPV 352
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+ L T +A+G +H+ AL S G + +G +D G+LG + + P + L
Sbjct: 353 AVSGLPSGVET-IAAGDYHTCALMSSGGVRCWGHNDRGQLG-DGTTTARSTPVAVSGLPS 410
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
+T+IA G + A S G ++ WG + QLG+G D
Sbjct: 411 G-VTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVETIAAG 469
Query: 384 -----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L G ++ +GR++ G+LG + +T P + L +T+IA G + A+
Sbjct: 470 GWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHIT-PVAVSGLPSG-VTAIAAGGVHTCAL 527
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G ++ WG QLG+G D P+ + G V +A+G H+ L
Sbjct: 528 TGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG---VTAIAAGDIHTCAL 578
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 190/454 (41%), Gaps = 58/454 (12%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L V + GG HT T G V+ WG ND G LG + DS LP I+A
Sbjct: 52 LQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAA 111
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVM 186
G +H+ AL G V+ WGS + +G +G + TP+ + + SG+ IA+G H
Sbjct: 112 GGAHTCALTSSGEVWCWGS--NFYGQLGDGSYTTRSTPVAVSGLPSGVTAIAAGGWHTCA 169
Query: 187 LTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
TS G + G +GQL G T RS P V + + G +
Sbjct: 170 RTSSGGVWCWGGNYRGQLGDGTTTDRS------------TPVAVSGLPSEVTAIAAGDAH 217
Query: 245 TFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
T S G + +G NNY QLG+ S S TP + L T +A+G H+
Sbjct: 218 TCARMSSGEVWCWGGNNYGQLGDG-SYTDSS------TPVAVSGL-PSGVTAIAAGGVHT 269
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
AL G + +G + G+LG ++ + P + L +T+IA G+ + A+ G
Sbjct: 270 CALTGSGGVRCWGANYSGQLG-NGLTFGRSTPGAVSGLPSG-VTAIAAGDYHTCALTGSG 327
Query: 364 VLYGWGMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHD 398
++ WG QLG+G L S G + +G +D
Sbjct: 328 GVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCWGHND 387
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
G+LG + + P + L +T+IA G + A S G ++ WG + QLG+G
Sbjct: 388 RGQLG-DGTTTARSTPVAVSGLPSG-VTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDG 445
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
D P+ + G V +A+GG H+ L
Sbjct: 446 SFTDSSTPVAVSGLASG---VETIAAGGWHTCAL 476
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 198/470 (42%), Gaps = 59/470 (12%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVY 91
+T G V G GQLG G +R T V L V + G HT G+V+
Sbjct: 170 RTSSGGVWCWGGNYRGQLGDG-TTTDRSTPVAVSGLPSEVTAIAAGDAHTCARMSSGEVW 228
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG N+ G LG + DS LP I+AG H+ AL G V WG+
Sbjct: 229 CWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVRCWGANYS-- 286
Query: 152 GSMGLKGEGI---QKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G G G+ + TP + + SG+ IA+G H LT G + G GQLG
Sbjct: 287 ---GQLGNGLTFGRSTPGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDG 343
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
T + +R+ +S L G ++ + G Y+T + S G + +G N+ QLG+
Sbjct: 344 T--TTARSTPVAVSGLPSG--------VETIAAGDYHTCALMSSGGVRCWGHNDRGQLGD 393
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ + TP + L T +A+G+ H+ A S G ++ +G + G+LG
Sbjct: 394 GTTTARS-------TPVAVSGL-PSGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDG 445
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK------ 380
+ ++ T P + L + +IA G + A+ G ++ WG N QLG+G
Sbjct: 446 SFTDSST-PVAVSGLASG-VETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHIT 503
Query: 381 -------------------EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
L G ++ +G + G+LG ++ T P + L
Sbjct: 504 PVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRST-PVAVSGLP 562
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+T+IA G+ + A+ G ++ WG + QLG+G + P+ + G
Sbjct: 563 SG-VTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSG 611
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 132/306 (43%), Gaps = 24/306 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
TG G V G+ ++GQLG G + A+ V + GG+HT LT G V+ W
Sbjct: 477 TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCW 536
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G N G LG D LP I+AGD H+ AL G V+ WG + G
Sbjct: 537 GGNFAGQLGDGTTTDRSTPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGG--NDFGQ 594
Query: 154 MGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G + TP+ + + SG+ IA+G + LT G + G GQL +
Sbjct: 595 LGDGTTTNRSTPVAVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQL---DDGTT 651
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
SR+ +S L G + G Y +S G + +G N QLG+ + +
Sbjct: 652 SRSTPVAVSGLPSGVTAIAAG-------GWYTCARTSSGGVRCWGANGSGQLGDGTTTKR 704
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
TP + L T +A+G H+ AL S G ++ +GR+D G+LG P+
Sbjct: 705 S-------TPVAVSGL-PSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDG---RPL 753
Query: 333 TEPTPI 338
TP+
Sbjct: 754 YRTTPV 759
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 193/467 (41%), Gaps = 60/467 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGG-MHTVCLTEDGKVYT 92
TG G V G +GQLG G R T V L + VE + G HT L G V
Sbjct: 324 TGSGGVWCWGGNYSGQLGDG-TTTARSTPVAVSGLPSGVETIAAGDYHTCALMSSGGVRC 382
Query: 93 WGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG ND G LG + + P V+ LP I+AG H+ A G V+ WG +S
Sbjct: 383 WGHNDRGQLG-DGTTTARSTPVAVSGLPSGVTAIAAGRLHTCARTSSGGVWCWGD--NSD 439
Query: 152 GSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G TP+ + + SG+ IA+G H LT G + G GQLG +
Sbjct: 440 GQLGDGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGST- 498
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + P V + + G V+ ++ G + +G N QLG+ +
Sbjct: 499 ---------IYHITPVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTT 549
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LK 326
+ TP + L T +A+G H+ AL G ++ +G +D+G+LG
Sbjct: 550 TDRS-------TPVAVSGL-PSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTT 601
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--- 383
N S PV + +PS +T+IA G + A+ G ++ WG QL +G
Sbjct: 602 NRSTPV-AVSGLPS----GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTP 656
Query: 384 ---------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
S G + +G + G+LG ++ T P + L
Sbjct: 657 VAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRST-PVAVSGLPS 715
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+T+IA G + A+ S G ++ WG + QLG+G+ P+ +
Sbjct: 716 G-VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVDV 761
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 157/352 (44%), Gaps = 29/352 (8%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVE-VVVGGMHTVCLTEDGKVY 91
+T G V G GQLG G + T V L + VE + GG HT LT G V+
Sbjct: 425 RTSSGGVWCWGDNSDGQLGDG-SFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVW 483
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N+ G LG + P V+ LP I+AG H+ AL G V+ WG +
Sbjct: 484 CWGRNNSGQLG-DGSTIYHITPVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGG--NF 540
Query: 151 HGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +G + TP+ + + SG+ IA+G H LT G + G + GQLG T
Sbjct: 541 AGQLGDGTTTDRSTPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGT- 599
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEAD 268
+ +R+ +S L G + + G+ Y ++ G + +G N QL +
Sbjct: 600 -TTNRSTPVAVSGLPSG--------VTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDD-- 648
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
G T TP + L T +A+G ++ A S G + +G + G+LG
Sbjct: 649 ------GTTSRSTPVAVSGL-PSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTT 701
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
++ T P + L +T+IA G + A+ S G ++ WG + QLG+G+
Sbjct: 702 TKRST-PVAVSGLPSG-VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGR 751
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 39/381 (10%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 4 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 62
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 63 VTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 117
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +A+GA+H
Sbjct: 118 CGDSHCLAVTXEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHT 175
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVY 243
+T G+L G G LG R R L P V + V G
Sbjct: 176 AAVTEDGDLYGWGWGRYGNLGL-----GDRTDR-----LVPERVTSTGGEKXSXVACGWR 225
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+T +S G++ +G + Y QLG D E PH +++LS+ + ++ G H
Sbjct: 226 HTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISGGARH 278
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+ AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+
Sbjct: 279 TXALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTER 337
Query: 363 GVLYGWGMGNGYQLGNGKEDD 383
++ WG G QLG G+ D
Sbjct: 338 NNVFAWGRGTNGQLGIGESVD 358
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 176/390 (45%), Gaps = 59/390 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 5 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 62
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-- 234
+ GADH V + G + + G GR+ ++S P +P+K H
Sbjct: 63 VTCGADHTVAYSQSGXEVYS--WGWGDFGRLGHGNSS-------DLFTP--LPIKALHGI 111
Query: 235 -IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G + ++ +G + ++G N QLG D+E P I++ +
Sbjct: 112 RIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGIR 164
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + + +ACG
Sbjct: 165 IKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKXSXVACG 223
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
+ ++ G LY +G QLG+G +D L
Sbjct: 224 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALT 283
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 284 SDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 342
Query: 447 WGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 343 WGRGTNGQLGIGESVDRNFPKIIEALSVDG 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 6 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 64
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G ++Y++G D+GRLG N S+
Sbjct: 65 CGADHTVAYSQSGX-------------------------EVYSWGWGDFGRLGHGNSSDL 99
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 100 FT-PLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 158
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 159 A--FEGIRIKXVAAGAEHTAAVTE 180
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G + T G GQLG G D+ + +E L N + ++ G HT LT DGK+Y WG
Sbjct: 234 GALYTYGWSKYGQLGHG-DLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWG 292
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G +G D + P V P +K VQ+S G H++A+ E V+AWG R ++G
Sbjct: 293 WNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG--RGTNG 349
Query: 153 SMGLKGEGIQKT-PLKLESVS 172
+G+ GE + + P +E++S
Sbjct: 350 QLGI-GESVDRNFPKIIEALS 369
>gi|308509404|ref|XP_003116885.1| CRE-RAN-3 protein [Caenorhabditis remanei]
gi|308241799|gb|EFO85751.1| CRE-RAN-3 protein [Caenorhabditis remanei]
Length = 573
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 205/410 (50%), Gaps = 44/410 (10%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDL 68
RKQA+ +Q + + P++ G VL+CG+G+ G G RK E+
Sbjct: 134 RKQAK-LTQPLLTWQQFAPSII----GDRVLSCGEGEALGHPGRTTTKKPRKVDIFEENG 188
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG---ALGREAEGDS-EF--IP--QTVNLPK 120
++VV GG+H+ LT DG+V+ G N++G A G E EG + EF +P + +
Sbjct: 189 LKPIQVVAGGVHSSVLTSDGQVFMCGINEKGTVPAEGVEHEGSTDEFAKVPFSEEIGREG 248
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVK 176
K + ++AG S + AL ++G+V AWG+ R+S+G++ + +Q+ P+ + ++ IVK
Sbjct: 249 KIIMLAAGASFTAALTDEGSVIAWGNLRNSNGNVDVHPLLHKMQEKPVVIVHQAKRKIVK 308
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE---VPLKRK 233
IA+G +H VML +G LLT G E GQLGR S ++ R E G+ VPL+ K
Sbjct: 309 IAAGENHLVMLDEKGCLLTFGDGEMGQLGR---SSRTKTIRSKYMCDESGDHLVVPLRFK 365
Query: 234 H--------IDDVFTGVYNTFISSK-GSILAFGLNNYSQLG----EAD--SEVQKSGNTC 278
+ +VF + T I + G +FGLNNY+QLG EAD + Q +
Sbjct: 366 NKGKFYDVVAKNVFASGFWTIIHGEDGKYYSFGLNNYAQLGIKVDEADVGQDGQDNRELR 425
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
F P + ++ + G H + L+S+G ++A G++ LG+ N + + +
Sbjct: 426 VFLPTEAPAFGAEETFVNIEGVQHVVLLDSQGNVFAMGKNTDNALGIGNWTGKDDQQHWL 485
Query: 339 -PSLQ----DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+LQ D I ++ S A +G Y WG QLG G +DD
Sbjct: 486 YDTLQKLDFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDD 535
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 175/419 (41%), Gaps = 82/419 (19%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEG----IQKTPLKLE--SVSG 173
K +Q+ AG HS L DG V+ G + + + + G++ EG K P E
Sbjct: 190 KPIQVVAGGVHSSVLTSDGQVFMCGINEKGTVPAEGVEHEGSTDEFAKVPFSEEIGREGK 249
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL--- 230
I+ +A+GA LT G+++ G R+++ N + E P+
Sbjct: 250 IIMLAAGASFTAALTDEGSVIAWG----------NLRNSNGNVDVHPLLHKMQEKPVVIV 299
Query: 231 ---KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFT-PHLI 285
KRK + + + KG +L FG QLG + ++ +S C + HL+
Sbjct: 300 HQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLV 359
Query: 286 KSLSDK---KF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK---------- 326
L K KF + ASG ++ +GK Y+FG ++Y +LG+K
Sbjct: 360 VPLRFKNKGKFYDVVAKNVFASG-FWTIIHGEDGKYYSFGLNNYAQLGIKVDEADVGQDG 418
Query: 327 --NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
N V PT P A G +F ++ EGV + +
Sbjct: 419 QDNRELRVFLPTEAP----------AFGAEETF-VNIEGVQHVV---------------L 452
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAID 439
L+S+G ++A G++ LG+ N + + + +LQ D I ++ S A
Sbjct: 453 LDSQGNVFAMGKNTDNALGIGNWTGKDDQQHWLYDTLQKLDFDSKIVGVSAKLATSIAWS 512
Query: 440 SEGVLYGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G Y WG QLG G +DD + +P +I L++++++ + QH++ILAK
Sbjct: 513 EDGTAYAWGFDTTGQLGLGLKDDDEKMVSKPEEISSAHLDDHSIIGASISDQHTLILAK 571
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 124/332 (37%), Gaps = 75/332 (22%)
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
R+ ++ R+ F E G P++ V GV+++ ++S G + G+N +
Sbjct: 172 RTTTKKPRKVDIFEENGLKPIQV-----VAGGVHSSVLTSDGQVFMCGINEKGTVPAEGV 226
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKN 327
E + S + P + + K MLA+G + AL EG + A+G R+ G + +
Sbjct: 227 EHEGSTDEFAKVPFSEEIGREGKIIMLAAGASFTAALTDEGSVIAWGNLRNSNGNVDVHP 286
Query: 328 VSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
+ + E P I + I IA G +D +G L +G G QLG +
Sbjct: 287 LLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIR 346
Query: 387 S-------------------------------------------EGKIYAFGRHDYGRLG 403
S +GK Y+FG ++Y +LG
Sbjct: 347 SKYMCDESGDHLVVPLRFKNKGKFYDVVAKNVFASGFWTIIHGEDGKYYSFGLNNYAQLG 406
Query: 404 LK------------NVSEPVTEPTPIPSL-QDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+K N V PT P+ ++T +I V +DS+G ++ G
Sbjct: 407 IKVDEADVGQDGQDNRELRVFLPTEAPAFGAEETFVNIEGVQHVVL-LDSQGNVFAMGKN 465
Query: 451 NGYQLG----NGKED------DILEPMKIEGK 472
LG GK+D D L+ + + K
Sbjct: 466 TDNALGIGNWTGKDDQQHWLYDTLQKLDFDSK 497
>gi|392512630|emb|CAD25339.2| REGULATOR OF CHROMOSOME CONDENSATION [Encephalitozoon cuniculi
GB-M1]
Length = 359
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 34/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V G QLGLG D + D ++ +V G +HT+ L DG +Y+WGCN
Sbjct: 3 VFVFGSNAISQLGLGEDAESTHVPTRLSFFDKMSLTKVRCGSLHTLVLDSDGMLYSWGCN 62
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
DEGALGR+ + E PQ V L +K V + G S SVAL G VY WG+FR ++G+ GL
Sbjct: 63 DEGALGRDGD---ESTPQRVCLDEKIVDMDCGASISVALTSRGHVYVWGTFRSTNGTFGL 119
Query: 157 K-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G+ I P+K+ + I +++G L S+ ++ T G E G+LGR R++ RN
Sbjct: 120 TPGKKISFEPVKV-PLKSITALSAGQGFVAALDSKDSIFTFGSNEFGELGR---RTSERN 175
Query: 216 ARRGMSFLEPGEVPLKRKHIDD-----VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
R L P V RK + + + G+ + +++ G +G N Y QLG +
Sbjct: 176 KLRA---LIPDAVTTPRKRLRNYRFRSISCGLNHIIALNTDGEAYCWGSNLYGQLGHDKA 232
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E F + + ++ +A G++HSL + +G +Y GR+ G+LG+++V
Sbjct: 233 EST-------FNKYKVPLDGIRQ---VAGGENHSLFVTIDGTLYGCGRNKEGQLGIQSV- 281
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
E V P + +T+ S N + LY WG G LG+ +E
Sbjct: 282 EAVRTPMKLSIEHVETVRSYNSFNICRVGNE----LYSWGTGFNGALGHEEE 329
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 113/276 (40%), Gaps = 51/276 (18%)
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
S+ FG N SQLG D+E P + T + G H+L L+S+G
Sbjct: 2 SVFVFGSNAISQLGLGEDAESTH-------VPTRLSFFDKMSLTKVRCGSLHTLVLDSDG 54
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y++G +D G LG E TP D+ I + CG +S A+ S G +Y WG
Sbjct: 55 MLYSWGCNDEGALGRDG-----DESTPQRVCLDEKIVDMDCGASISVALTSRGHVYVWGT 109
Query: 371 ---GNG-YQLGNGKEDDI----------------------LNSEGKIYAFGRHDYGRLGL 404
NG + L GK+ L+S+ I+ FG +++G LG
Sbjct: 110 FRSTNGTFGLTPGKKISFEPVKVPLKSITALSAGQGFVAALDSKDSIFTFGSNEFGELGR 169
Query: 405 KNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ P TP L++ SI+CG A++++G Y WG QLG+
Sbjct: 170 RTSERNKLRALIPDAVTTPRKRLRNYRFRSISCGLNHIIALNTDGEAYCWGSNLYGQLGH 229
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
K + K+ + QVA G HS+ +
Sbjct: 230 DKAESTFNKYKVPLDGIR-----QVAGGENHSLFVT 260
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 69/344 (20%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
+V+ +GS S +G E T L + K+ G+ H ++L S G L + GC
Sbjct: 2 SVFVFGSNAISQLGLGEDAESTHVPTRLSFFDKMSLTKVRCGSLHTLVLDSDGMLYSWGC 61
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
++G LGR S P V L K +D + ++S+G + +G
Sbjct: 62 NDEGALGRDGDEST------------PQRVCLDEKIVDMDCGASISVALTSRGHVYVWG- 108
Query: 259 NNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD-----KKFTMLASGQHHSLALNSEGKI 312
+S N F TP S K T L++GQ AL+S+ I
Sbjct: 109 ------------TFRSTNGTFGLTPGKKISFEPVKVPLKSITALSAGQGFVAALDSKDSI 156
Query: 313 YAFGRHDYGRLGLKNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ FG +++G LG + P TP L++ SI+CG A
Sbjct: 157 FTFGSNEFGELGRRTSERNKLRALIPDAVTTPRKRLRNYRFRSISCGLNHIIA------- 209
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
LN++G+ Y +G + YG+LG + +E +P I
Sbjct: 210 -------------------LNTDGEAYCWGSNLYGQLG-HDKAESTFNKYKVPL---DGI 246
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+A G S + +G LYG G QLG + + PMK+
Sbjct: 247 RQVAGGENHSLFVTIDGTLYGCGRNKEGQLGIQSVEAVRTPMKL 290
>gi|347838467|emb|CCD53039.1| hypothetical protein [Botryotinia fuckeliana]
Length = 587
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 180/412 (43%), Gaps = 80/412 (19%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVED------LDNVVEVVVGGMHTVCLTEDGKVYT 92
V G G+ +LGLG + + K V L V +V VGGMH V LT+D ++ T
Sbjct: 151 VYVFGSGENNELGLGANKINGKAPTNVMRPRYNPLLKGVTQVAVGGMHCVALTDDQRILT 210
Query: 93 WGCNDEGALGR------------EAEGDSEFIPQTVNLP---------------KKAVQI 125
WG +D G+LGR +A+ DSE V P +K Q+
Sbjct: 211 WGVSDGGSLGRDTSSYEAPAKDVDADSDSEDEEDIVLNPLESTPTAISTEFLDGRKVAQV 270
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-----------------IQKTPLKL 168
A DS S L EDG VY WGSF + G +G EG IQ P+ +
Sbjct: 271 IACDSSSFVLTEDGYVYGWGSFVGNDGIIGFTAEGASMAAKERDGDLKKKFQIQAEPMLI 330
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
+ I +A G++H + L ++G + T G EQ QLGR N R + L P +
Sbjct: 331 PGLKNIKSLARGSNHVMALDNKGTVFTWGACEQNQLGRRV------NNRFKFAALTPTPI 384
Query: 229 PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIK 286
K K I G +++F I++K +L++GLNNY Q G A + G+ F P ++K
Sbjct: 385 LKKCKSIAG---GSFHSFAINTKDQVLSWGLNNYGQTGIASNA---GGDDAFIHNPTVVK 438
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS--------EPVTEPTPI 338
+ H++A + ++ GR D G+ GL S P T I
Sbjct: 439 GFEGFDVKQIKGCFQHTIACTEKQEVLVVGRCDEGQTGLDLTSVDQDTVIVSPTTSKPAI 498
Query: 339 PSLQDKTITSIACGNCVSFAIDS------EGVLYGWGMGNGYQLGNGKEDDI 384
L+ T+ V+ AID+ +G ++ WG G Y++G G +D +
Sbjct: 499 --LKALTVVPGVKATFVAGAIDNSIVLAEDGKVWAWGYGENYRIGLGSDDTV 548
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 184/479 (38%), Gaps = 82/479 (17%)
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP------ 119
E L ++ +G TE VY +G + LG A + P V P
Sbjct: 127 ESLPVAKKLKIGASINTPPTERLDVYVFGSGENNELGLGANKINGKAPTNVMRPRYNPLL 186
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
K Q++ G H VAL +D + WG GS+G + +++ S S
Sbjct: 187 KGVTQVAVGGMHCVALTDDQRILTWGV--SDGGSLGRDTSSYEAPAKDVDADSD-----S 239
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
+ ++L + TA E ++ Q A ++ SF+ +D +
Sbjct: 240 EDEEDIVLNPLESTPTAISTEFLDGRKVAQVIACDSS----SFV----------LTEDGY 285
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +F+ + G I+ F S E D +++K P LI L K LA
Sbjct: 286 VYGWGSFVGNDG-IIGFTAEGASMAAKERDGDLKKKFQ-IQAEPMLIPGL--KNIKSLAR 341
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G +H +AL+++G ++ +G + +LG + N TP P L K SIA G+ SF
Sbjct: 342 GSNHVMALDNKGTVFTWGACEQNQLGRRVNNRFKFAALTPTPIL--KKCKSIAGGSFHSF 399
Query: 358 AIDSEGVLYGWGMGNGYQLG---NGKEDDIL----------------------------N 386
AI+++ + WG+ N Q G N DD
Sbjct: 400 AINTKDQVLSWGLNNYGQTGIASNAGGDDAFIHNPTVVKGFEGFDVKQIKGCFQHTIACT 459
Query: 387 SEGKIYAFGRHDYGRLGLKNVS--------EPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ ++ GR D G+ GL S P T I L+ T+ V+ AI
Sbjct: 460 EKQEVLVVGRCDEGQTGLDLTSVDQDTVIVSPTTSKPAI--LKALTVVPGVKATFVAGAI 517
Query: 439 DS------EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
D+ +G ++ WG G Y++G G +D + P IE + + GGQ SVI
Sbjct: 518 DNSIVLAEDGKVWAWGYGENYRIGLGSDDTVRTPTLIENSAIKGKKITFAGCGGQFSVI 576
>gi|268530278|ref|XP_002630265.1| C. briggsae CBR-RAN-3 protein [Caenorhabditis briggsae]
Length = 566
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 193/384 (50%), Gaps = 39/384 (10%)
Query: 36 GGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+CG+G+ G G RK E+ +++VV GG+H+ LT +G+V+ G
Sbjct: 148 GDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLKMLQVVAGGVHSAVLTSEGQVFMCG 207
Query: 95 CNDEG---ALGREAEGDS-EF--IPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
N++G A G E EG + EF +P + + + K + ++AG S + L + G+V AWG+
Sbjct: 208 INEKGTVPAEGVEMEGSTDEFTKVPFSDEIQEEGKIIMLAAGASFTAGLTDQGSVIAWGN 267
Query: 147 FRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R+S+G++ + +Q+ P+ + ++ IVKIA+G +H VML +G +LT G E G
Sbjct: 268 LRNSNGNVDVHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGCILTFGDGEMG 327
Query: 203 QLGRITQRSASRNARRGMSFLEPGE---VPLKRKH--------IDDVF-TGVYNTFISSK 250
QLGR S ++ R E G+ VPL+ K+ +VF +G +
Sbjct: 328 QLGR---SSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVVAKNVFASGFWTIVHGED 384
Query: 251 GSILAFGLNNYSQLG----EAD--SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
G AFGLNNY+QLG EAD + Q + F P + ++ + G H +
Sbjct: 385 GKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAEQTFVNIEGVQHVV 444
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAI 359
L++EGK++A G++ LGL N + + + SLQ D I ++ S A
Sbjct: 445 LLDNEGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDSLQQVEFDSKIVGVSAKLATSIAW 504
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+G Y WG QLG G +DD
Sbjct: 505 SEDGTAYAWGFDTTGQLGLGLKDD 528
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 178/414 (42%), Gaps = 72/414 (17%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEG----IQKTPL--KLESVSG 173
K +Q+ AG HS L +G V+ G + + + + G++ EG K P +++
Sbjct: 183 KMLQVVAGGVHSAVLTSEGQVFMCGINEKGTVPAEGVEMEGSTDEFTKVPFSDEIQEEGK 242
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL--- 230
I+ +A+GA LT +G+++ G R+++ N + E P+
Sbjct: 243 IIMLAAGASFTAGLTDQGSVIAWG----------NLRNSNGNVDVHPLLHKMQEKPVVIV 292
Query: 231 ---KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFT-PHLI 285
KRK + + + KG IL FG QLG + ++ +S C + HL+
Sbjct: 293 HQAKRKIVKIAAGENHLVMLDEKGCILTFGDGEMGQLGRSSRTKTIRSKFMCDESGDHLV 352
Query: 286 KSLSDK---KF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
L K KF + ASG ++ +GK YAFG ++Y +LG+K V E
Sbjct: 353 VPLRFKNKGKFYDVVAKNVFASG-FWTIVHGEDGKYYAFGLNNYAQLGIK-----VDEAD 406
Query: 337 PIPSLQDKTITSI-------ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
QD + A G +F ++ EGV + +L++EG
Sbjct: 407 VGQDGQDNRELRVFLPAEAPAFGAEQTF-VNIEGVQHVV---------------LLDNEG 450
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACGNCVSFAIDSEGVL 444
K++A G++ LGL N + + + SLQ D I ++ S A +G
Sbjct: 451 KVFAMGKNTDNALGLGNWTGKDDQQHWLYDSLQQVEFDSKIVGVSAKLATSIAWSEDGTA 510
Query: 445 YGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Y WG QLG G +DD + +P +I L +++++ + QH++ILAK
Sbjct: 511 YAWGFDTTGQLGLGLKDDDEKMVGKPEEISSAHLEDHSIIGASISDQHTLILAK 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 140/337 (41%), Gaps = 50/337 (14%)
Query: 153 SMGLKGEGIQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL-GRI 207
++G G K P K++ ++++ +G H +LTS G + G E+G +
Sbjct: 159 ALGHPGRTTTKKPRKVDIFEEEGLKMLQVVAGGVHSAVLTSEGQVFMCGINEKGTVPAEG 218
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
+ S + + F + E+ + K I + ++ +GS++A+G N + G
Sbjct: 219 VEMEGSTDEFTKVPFSD--EIQEEGKIIMLAAGASFTAGLTDQGSVIAWG-NLRNSNGNV 275
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D V + P +I + +K +A+G++H + L+ +G I FG + G+LG
Sbjct: 276 D--VHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGCILTFGDGEMGQLGR-- 331
Query: 328 VSEPVTEPTPIPSLQDKTITS-IACGN-----CVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
S + KTI S C V ++G Y N + +G
Sbjct: 332 ------------SSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVVAKNVF--ASGFW 377
Query: 382 DDILNSEGKIYAFGRHDYGRLGLK------------NVSEPVTEPTPIPSL-QDKTITSI 428
+ +GK YAFG ++Y +LG+K N V P P+ ++T +I
Sbjct: 378 TIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAEQTFVNI 437
Query: 429 ACGNCVSFAIDSEGVLYGWGMG--NGYQLGN--GKED 461
V +D+EG ++ G N LGN GK+D
Sbjct: 438 EGVQHVVL-LDNEGKVFAMGKNTDNALGLGNWTGKDD 473
>gi|19074229|ref|NP_584835.1| REGULATOR OF CHROMOSOME CONDENSATION [Encephalitozoon cuniculi
GB-M1]
Length = 440
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 171/352 (48%), Gaps = 34/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V G QLGLG D + D ++ +V G +HT+ L DG +Y+WGCN
Sbjct: 84 VFVFGSNAISQLGLGEDAESTHVPTRLSFFDKMSLTKVRCGSLHTLVLDSDGMLYSWGCN 143
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
DEGALGR+ + E PQ V L +K V + G S SVAL G VY WG+FR ++G+ GL
Sbjct: 144 DEGALGRDGD---ESTPQRVCLDEKIVDMDCGASISVALTSRGHVYVWGTFRSTNGTFGL 200
Query: 157 K-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G+ I P+K+ + I +++G L S+ ++ T G E G+LGR R++ RN
Sbjct: 201 TPGKKISFEPVKV-PLKSITALSAGQGFVAALDSKDSIFTFGSNEFGELGR---RTSERN 256
Query: 216 ARRGMSFLEPGEVPLKRKHIDDV-FTGV-----YNTFISSKGSILAFGLNNYSQLGEADS 269
R L P V RK + + F + + +++ G +G N Y QLG +
Sbjct: 257 KLRA---LIPDAVTTPRKRLRNYRFRSISCGLNHIIALNTDGEAYCWGSNLYGQLGHDKA 313
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E F + + ++ +A G++HSL + +G +Y GR+ G+LG+++V
Sbjct: 314 EST-------FNKYKVPLDGIRQ---VAGGENHSLFVTIDGTLYGCGRNKEGQLGIQSV- 362
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
E V P + +T+ S N + LY WG G LG+ +E
Sbjct: 363 EAVRTPMKLSIEHVETVRSYNSFNICRVGNE----LYSWGTGFNGALGHEEE 410
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 51/275 (18%)
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
S+ FG N SQLG D+E P + T + G H+L L+S+G
Sbjct: 83 SVFVFGSNAISQLGLGEDAESTH-------VPTRLSFFDKMSLTKVRCGSLHTLVLDSDG 135
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y++G +D G LG E TP D+ I + CG +S A+ S G +Y WG
Sbjct: 136 MLYSWGCNDEGALGRDG-----DESTPQRVCLDEKIVDMDCGASISVALTSRGHVYVWGT 190
Query: 371 ---GNG-YQLGNGKEDDI----------------------LNSEGKIYAFGRHDYGRLGL 404
NG + L GK+ L+S+ I+ FG +++G LG
Sbjct: 191 FRSTNGTFGLTPGKKISFEPVKVPLKSITALSAGQGFVAALDSKDSIFTFGSNEFGELGR 250
Query: 405 KNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ P TP L++ SI+CG A++++G Y WG QLG+
Sbjct: 251 RTSERNKLRALIPDAVTTPRKRLRNYRFRSISCGLNHIIALNTDGEAYCWGSNLYGQLGH 310
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
K + K+ + QVA G HS+ +
Sbjct: 311 DKAESTFNKYKVPLDGIR-----QVAGGENHSLFV 340
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 69/344 (20%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
+V+ +GS S +G E T L + K+ G+ H ++L S G L + GC
Sbjct: 83 SVFVFGSNAISQLGLGEDAESTHVPTRLSFFDKMSLTKVRCGSLHTLVLDSDGMLYSWGC 142
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
++G LGR S P V L K +D + ++S+G + +G
Sbjct: 143 NDEGALGRDGDEST------------PQRVCLDEKIVDMDCGASISVALTSRGHVYVWG- 189
Query: 259 NNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD-----KKFTMLASGQHHSLALNSEGKI 312
+S N F TP S K T L++GQ AL+S+ I
Sbjct: 190 ------------TFRSTNGTFGLTPGKKISFEPVKVPLKSITALSAGQGFVAALDSKDSI 237
Query: 313 YAFGRHDYGRLGLKNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ FG +++G LG + P TP L++ SI+CG A
Sbjct: 238 FTFGSNEFGELGRRTSERNKLRALIPDAVTTPRKRLRNYRFRSISCGLNHIIA------- 290
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
LN++G+ Y +G + YG+LG + +E +P I
Sbjct: 291 -------------------LNTDGEAYCWGSNLYGQLG-HDKAESTFNKYKVPL---DGI 327
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+A G S + +G LYG G QLG + + PMK+
Sbjct: 328 RQVAGGENHSLFVTIDGTLYGCGRNKEGQLGIQSVEAVRTPMKL 371
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 175/356 (49%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG D+ G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDTDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---R 206
+GL G E K P ++S++ IV+IA G H + L+ + + G + GQLG
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174
Query: 207 ITQRSASRNARR--GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ +SA + + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 LKSQSAPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L+ QLG +E P IKSL+D + +A G +HSLAL+ +++++G+
Sbjct: 110 LDTDGQLGLPGTEEYIK------VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL + + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 233 KHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
K + DV G+ +T F+ G++ G N+ QLG S + P + +L +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK---------PEQVVALDAQ 84
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++ G+ H+LALN +G++YA+G G+LGL E + P I SL D I IAC
Sbjct: 85 NIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIAC 144
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE---------------------------DDI 384
G S A+ ++ WG QLG G E +
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L G I+ +GR+ +G+LGL + ++ P + SL+ + I I CG + A+ EG +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRFV-PNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
+ +G G QLG+ + P K+ +L V Q+A G QH+
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHT 306
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQI+ G HS+AL + V++WG ++ HG
Sbjct: 112 TDGQLG--LPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E Q P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRFVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 279 TSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+KK + G H++ + +G +Y G +D G+LG + + +P + +L + I ++
Sbjct: 33 NKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAV 89
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+CG + A LN +G++YA+G G+LGL E
Sbjct: 90 SCGEAHTLA--------------------------LNDKGQVYAWGLDTDGQLGLPGTEE 123
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMK 468
+ P I SL D I IACG S A+ ++ WG QLG G E P
Sbjct: 124 YIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQL 183
Query: 469 IEGKQLNNYTVLQVASGGQHSVILA 493
I K L +QVA+GG HS +L
Sbjct: 184 I--KSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG ++ + L++ L + ++V GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D F+P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L + ++Q+A G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNI--KSLTDIQIVQIACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 175/356 (49%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG D+ G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDTDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---R 206
+GL G E K P ++S++ IV+IA G H + L+ + + G + GQLG
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174
Query: 207 ITQRSASRNARR--GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ +SA + + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 LKSQSAPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L+ QLG +E P IKSL+D + +A G +HSLAL+ +++++G+
Sbjct: 110 LDTDGQLGLPGTEEYIK------VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL + + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 233 KHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
K + DV G+ +T F+ G++ G N+ QLG S + P + +L +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK---------PEQVVALDAQ 84
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++ G+ H+LALN +G++YA+G G+LGL E + P I SL D I IAC
Sbjct: 85 NIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIAC 144
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE---------------------------DDI 384
G S A+ ++ WG QLG G E +
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L G I+ +GR+ +G+LGL + ++ P + SL+ + I I CG + A+ EG +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRFV-PNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
+ +G G QLG+ + P K+ +L V Q+A G QH+
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHT 306
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQI+ G HS+AL + V++WG ++ HG
Sbjct: 112 TDGQLG--LPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E Q P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRFVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 279 TSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+KK + G H++ + +G +Y G +D G+LG + + +P + +L + I ++
Sbjct: 33 NKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAV 89
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+CG + A LN +G++YA+G G+LGL E
Sbjct: 90 SCGEAHTLA--------------------------LNDKGQVYAWGLDTDGQLGLPGTEE 123
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMK 468
+ P I SL D I IACG S A+ ++ WG QLG G E P
Sbjct: 124 YIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQL 183
Query: 469 IEGKQLNNYTVLQVASGGQHSVILA 493
I K L +QVA+GG HS +L
Sbjct: 184 I--KSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG ++ + L++ L + ++V GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D F+P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L + ++Q+A G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNI--KSLTDIQIVQIACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|403173682|ref|XP_003332733.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170648|gb|EFP88314.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 694
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 50/339 (14%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGP----DVMERKTFALVEDLDN------VVEVVVGGM 79
LK K VVL G GD GQ+G+GP DV + +L+E+L V + GGM
Sbjct: 170 LKGKPESHVVLIFGAGDMGQMGMGPEKLDDVRKPAVHSLIEELRQKNEFTEPVHLAAGGM 229
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEG-------------------DSEFIPQTVNLPK 120
HT+ + GK++TWG ND ALGR+ EG + P++ P
Sbjct: 230 HTLVVDSAGKIWTWGINDNAALGRQTEGIEGVEQEELETRPMSVATLSPQPDPESNRTPF 289
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVS--GI 174
KA ++ AGDS SVA+ E+G + AWGSFR + G +G G Q P ++ ++ +
Sbjct: 290 KAARVCAGDSVSVAVSEEGELVAWGSFRSNDGLLGFDGMVGTSPKQLVPTRVSNLREYPV 349
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
++ G DH + LT+ G++ + G +Q QLGR RR + L P + LK+
Sbjct: 350 SQVVCGYDHVLALTTDGHVYSWGNGQQQQLGRKIIE------RRKKNGLAPERLSLKK-- 401
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD--- 290
I + TG ++F + G++ +GLN QLG SE N P I++++
Sbjct: 402 IVLLGTGGSHSFAVHENGTVYGWGLNTRGQLG-ISSEEAGWENEIVSVPTPIRAMAPDQH 460
Query: 291 --KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ + G H+L L G+++A G ++ G +G+K+
Sbjct: 461 DGARVVAIEGGDFHTLFLLDNGQVWAVGNYENGEIGIKH 499
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 55/263 (20%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFT---MLASGQHHSLALNS 308
+L FG + Q+G ++ + LI+ L K +FT LA+G H+L ++S
Sbjct: 179 VLIFGAGDMGQMGMGPEKLDDVRKPAVHS--LIEELRQKNEFTEPVHLAAGGMHTLVVDS 236
Query: 309 EGKIYAFGRHDYGRLG---------------LKNVSEPVTEPTPIPSLQDKTITS--IAC 351
GKI+ +G +D LG + +S P P P + +
Sbjct: 237 AGKIWTWGINDNAALGRQTEGIEGVEQEELETRPMSVATLSPQPDPESNRTPFKAARVCA 296
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHD--YGRLGLKNVSE 409
G+ VS A+ EG L WG +F +D G G+ S
Sbjct: 297 GDSVSVAVSEEGELVAWG-----------------------SFRSNDGLLGFDGMVGTSP 333
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
PT + +L++ ++ + CG A+ ++G +Y WG G QLG I+E K
Sbjct: 334 KQLVPTRVSNLREYPVSQVVCGYDHVLALTTDGHVYSWGNGQQQQLGR----KIIERRKK 389
Query: 470 EG---KQLNNYTVLQVASGGQHS 489
G ++L+ ++ + +GG HS
Sbjct: 390 NGLAPERLSLKKIVLLGTGGSHS 412
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDK-------- 291
G++ + S G I +G+N+ + LG ++ T P + +LS +
Sbjct: 228 GMHTLVVDSAGKIWTWGINDNAALGRQTEGIEGVEQEELETRPMSVATLSPQPDPESNRT 287
Query: 292 --KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNV---SEPVTEPTPIPSLQDK 344
K + +G S+A++ EG++ A+G R + G LG + S PT + +L++
Sbjct: 288 PFKAARVCAGDSVSVAVSEEGELVAWGSFRSNDGLLGFDGMVGTSPKQLVPTRVSNLREY 347
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
++ + CG A+ ++G +Y WG G QLG KI R L
Sbjct: 348 PVSQVVCGYDHVLALTTDGHVYSWGNGQQQQLGR-----------KI--IERRKKNGLAP 394
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-----NGK 459
+ +S K I + G SFA+ G +YGWG+ QLG G
Sbjct: 395 ERLSL-------------KKIVLLGTGGSHSFAVHENGTVYGWGLNTRGQLGISSEEAGW 441
Query: 460 EDDILE-PMKIEG---KQLNNYTVLQVASGGQHSVIL 492
E++I+ P I Q + V+ + G H++ L
Sbjct: 442 ENEIVSVPTPIRAMAPDQHDGARVVAIEGGDFHTLFL 478
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 32/252 (12%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ------------RSASRNARRGMSF 222
V +A+G H +++ S G + T G + LGR T+ R S
Sbjct: 222 VHLAAGGMHTLVVDSAGKIWTWGINDNAALGRQTEGIEGVEQEELETRPMSVATLSPQPD 281
Query: 223 LEPGEVPLKRKHI---DDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNT 277
E P K + D V V S +G ++A+G +N LG D V S
Sbjct: 282 PESNRTPFKAARVCAGDSVSVAV-----SEEGELVAWGSFRSNDGLLG-FDGMVGTSPKQ 335
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
P + +L + + + G H LAL ++G +Y++G +LG K +
Sbjct: 336 --LVPTRVSNLREYPVSQVVCGYDHVLALTTDGHVYSWGNGQQQQLGRKIIERRKKNGLA 393
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-----NGKEDDILNSEGKIY 392
L K I + G SFA+ G +YGWG+ QLG G E++I++ I
Sbjct: 394 PERLSLKKIVLLGTGGSHSFAVHENGTVYGWGLNTRGQLGISSEEAGWENEIVSVPTPIR 453
Query: 393 AFG--RHDYGRL 402
A +HD R+
Sbjct: 454 AMAPDQHDGARV 465
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-----ILEPMKI-------EGK 472
+ I+CG + A+D++G Y WG+G +LG GK++D +LE K+ +G
Sbjct: 604 VIDISCGTRHNLAVDNQGNAYSWGLGQSNELGQGKDEDGEEIELLEAPKLLASKALTKGC 663
Query: 473 QLNNYTVLQVASGGQHSVILAKPKPN 498
+ V++ A+GG HS+++A P+
Sbjct: 664 ERGALRVVRCAAGGTHSLLIAATIPS 689
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ I+CG + A+D++G Y WG+G +LG GK++D
Sbjct: 604 VIDISCGTRHNLAVDNQGNAYSWGLGQSNELGQGKDED 641
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG +
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CQKQTSPQLIKSLL---GIPF----MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 166/394 (42%), Gaps = 65/394 (16%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+ WG+ S+G +GL G E I P K + + + G H V + G + T
Sbjct: 1 MLCWGN--ASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
GC + GQLG R V L ++I V G +T ++ KG + A
Sbjct: 59 GCNDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GL++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +
Sbjct: 108 WGLDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G++ YG+LGL + T P I SL +A G SF + G ++GWG Q
Sbjct: 162 GQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG E+D L EG ++ FG YG+LG + S
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 410 PVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L +T IACG S + S G +Y +G+G QLG G + P
Sbjct: 282 EIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 469 IEGKQL-------------NNYTVLQVASGGQHS 489
++G + + V ++ SGG S
Sbjct: 341 VKGNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 30/302 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ +G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
+ + P + L T +A G+ H+ A S G+IY+FG G+LG +
Sbjct: 279 TSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 328 VS 329
S
Sbjct: 332 TS 333
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|426328674|ref|XP_004025375.1| PREDICTED: regulator of chromosome condensation-like [Gorilla
gorilla gorilla]
Length = 164
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM 79
V++ +V T G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGM
Sbjct: 20 VYLLHPSVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGM 79
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLED 138
HTVCL++ G+VY++GCNDEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +D
Sbjct: 80 HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDD 139
Query: 139 GTVYAWGSFR 148
G V+ WGSFR
Sbjct: 140 GRVFLWGSFR 149
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + + G +L G + QLG ++ +++ P L+ D +G H
Sbjct: 29 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERK------KPALVSIPED--VVQAEAGGMH 80
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++ L+ G++Y+FG +D G LG ++ S +E P + + ++ G+ + A+ +
Sbjct: 81 TVCLSKSGQVYSFGCNDEGALG-RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDD 139
Query: 363 GVLYGWG 369
G ++ WG
Sbjct: 140 GRVFLWG 146
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 46/362 (12%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
+++ G G+ GQLG+G + E++ V+ L NV VV G +++ + EDGK++TWG
Sbjct: 7 AIISWGSGEDGQLGIGNN-EEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGW 65
Query: 96 NDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
N G LG E +E IP V K VQ + G H +A+ + G YAWG + +G
Sbjct: 66 NQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 123
Query: 154 MGLKGEGIQKT----------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G + E T P + S + ++A+G H V+LT G++ T G P
Sbjct: 124 CGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQPWP-- 181
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLN 259
G I Q S P++ + ++ V +N + G + A+G N
Sbjct: 182 PGDIKQIS----------------TPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNN 225
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
Y QLG D++ + P ++ LSD +A+G HS AL +G +Y +GR +
Sbjct: 226 EYGQLGTGDTQPRSQ-------PIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGE 278
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+GRLG + P + L ++ I I+CG S A+ +G ++ +G G+ +LG G
Sbjct: 279 HGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYG 338
Query: 380 KE 381
++
Sbjct: 339 RK 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 179/386 (46%), Gaps = 50/386 (12%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFR 148
+ +WG ++G LG + E++ L + V + AG +S+A+ EDG ++ WG
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWG--W 65
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + P ++++++ IV+ A G H + + +G G E GQ G
Sbjct: 66 NQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 125
Query: 206 RITQRS--ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+R R RR ++ + L + + G ++ ++ +G + +G
Sbjct: 126 EEPERKDDTGRPLRRDITIPQRCASKLSVRQV--AAGGTHSVVLTREGHVWTWGQP---- 179
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
++++ TP ++ L +K ++A G H+LAL +G ++A+G ++YG+L
Sbjct: 180 --WPPGDIKQ-----ISTPVRVQGL--EKVRLIAVGAFHNLALLEDGILWAWGNNEYGQL 230
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P ++P + L D T+ IA G S A+ +G +YGW
Sbjct: 231 GTGD-TQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGW--------------- 274
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
GR ++GRLG + P + L ++ I I+CG S A+ +G
Sbjct: 275 -----------GRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGR 323
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKI 469
++ +G G+ +LG G++ PM++
Sbjct: 324 MFSFGRGDHGRLGYGRKVTTGHPMEV 349
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 38/294 (12%)
Query: 230 LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L +++ V G N+ I G + +G N LG ++ P +K+L
Sbjct: 36 LAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTEN------IPSQVKAL 89
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NVSEPVTEPTPIPS--L 341
++ K A G H LA++ +G+ YA+G ++YG+ G + + P+ IP
Sbjct: 90 ANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCA 149
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGM----GNGYQLGN----------------GKE 381
++ +A G S + EG ++ WG G+ Q+
Sbjct: 150 SKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFH 209
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
+ L +G ++A+G ++YG+LG + ++P ++P + L D T+ IA G S A+ +
Sbjct: 210 NLALLEDGILWAWGNNEYGQLGTGD-TQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDD 268
Query: 442 GVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +YGWG G +LG G + + P K++ L ++Q++ GG HSV L +
Sbjct: 269 GGVYGWGRGEHGRLGFGDDKSSKMVPQKVQ--LLVEENIVQISCGGTHSVALTR 320
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 24/124 (19%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
T G V G+G+ G+LG G D ++ +K LVE +N+V++ GG H+V LT DG+
Sbjct: 266 TDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVE--ENIVQISCGGTHSVALTRDGR 323
Query: 90 VYTWGCNDEGALG---REAEGDSEFIPQTVNLPKK-------------AVQISAGDSHSV 133
++++G D G LG + G +P +NLP + ++ G H++
Sbjct: 324 MFSFGRGDHGRLGYGRKVTTGHPMEVP--INLPPATNLSGSGAGGHWCSKLVACGGRHTL 381
Query: 134 ALLE 137
A++E
Sbjct: 382 AIVE 385
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 193/421 (45%), Gaps = 66/421 (15%)
Query: 90 VYTWGCNDEGALGREAEGDS--EFIPQTVNLP-----KKAVQISAGDSHSVALLEDGTVY 142
VY++G N G L A GD+ P V+L ++ V ++ G+ + L EDG VY
Sbjct: 33 VYSFGQNTYGEL---ALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVY 89
Query: 143 AWGSFRDSHGSMGLKGEGIQKTP-LKLE---SVSGIVKIASG--ADHFVMLTSRGNLLTA 196
G ++G ++ P L+ S + V+I SG ++H L + GNL T
Sbjct: 90 TCGYNDSGQCAIGTT----ERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTV 145
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILA 255
G +GQLG S + +E L K + DV ++T + G + A
Sbjct: 146 GFNMRGQLGL-----GSSTTVMEATLVEE----LAGKRVADVGCSYFHTAIVMDNGDLYA 196
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G N+Y QLG D ++G P ++ + +A GQH+++A +G + AF
Sbjct: 197 CGCNDYGQLGLGD---HRNGE---LVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAF 250
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT-SIACGNCVSFAIDSEGVLYGWGMGNGY 374
G++D+G+LGL + SEPV++PT + + D+ + ++CG
Sbjct: 251 GKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGY--------------------- 289
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
++ +G +Y FGR+DYG+LGL + + P + SL IT +ACG
Sbjct: 290 -----HHTAVVTEDGAVYTFGRNDYGQLGLGHKMH-MARPARVESLARMRITQVACGCYH 343
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ + +G ++ +G N QLG D L P I L N TV +VA+G HSV L
Sbjct: 344 TLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLI--STLRNKTVTKVAAGFYHSVCLVG 401
Query: 495 P 495
P
Sbjct: 402 P 402
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 202/468 (43%), Gaps = 73/468 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN------VVEVVVGGMHTVCLTEDGKVYT 92
V + GQ G+L LG D +R V DL N VV+V G T L EDG VYT
Sbjct: 33 VYSFGQNTYGELALG-DTTDRSAPIRV-DLGNSNHGRRVVDVACGNEQTAILFEDGDVYT 90
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGD--SHSVALLEDGTVYAWGS 146
G ND G A G +E +P P + V+I +G+ H AL +G +Y G
Sbjct: 91 CGYNDSGQC---AIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGF 147
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ G +GL +E ++G + + H ++ G+L GC + GQL
Sbjct: 148 --NMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQL 205
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQ 263
G R+ R F R+ + V G + T S + G ++AFG N++ Q
Sbjct: 206 GLGDHRNGELVPRPVEYFF--------RRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQ 257
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG + S T P L L+ G HH+ + +G +Y FGR+DYG+L
Sbjct: 258 LGLDSTSEPVSQPTRLAAP-----LDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQL 312
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL + + P + SL IT +ACG C +
Sbjct: 313 GLGHKMH-MARPARVESLARMRITQVACG-CYHTLV------------------------ 346
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSE 441
L+ +GK++ FGR+++G+LGL+ S P I +L++KT+T +A G + V +E
Sbjct: 347 -LSDDGKVFPFGRNNHGQLGLET-SVDCLSPQLISTLRNKTVTKVAAGFYHSVCLVGPTE 404
Query: 442 G---VLYGWGMGNG---YQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
G G G NG L N D+ +EG+ L ++ + VA
Sbjct: 405 GETPPAQGSGTLNGDLRKMLNNSTRSDV--TFVVEGRPLFAHSCILVA 450
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 172/385 (44%), Gaps = 57/385 (14%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE---SVSG-- 173
P + +S+ D +LE VY++G ++++G + L + P++++ S G
Sbjct: 11 PAFVLPLSSDDEGESDVLEVEGVYSFG--QNTYGELALGDTTDRSAPIRVDLGNSNHGRR 68
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKR 232
+V +A G + +L G++ T G + GQ T+R + PG L
Sbjct: 69 VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLR-------FSPG---LSS 118
Query: 233 KHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+F+G + + + G++ G N QLG S T L++ L+
Sbjct: 119 NRTVRIFSGNGSEHLAALHANGNLYTVGFNMRGQLGLGSS-------TTVMEATLVEELA 171
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K+ + H+ + G +YA G +DYG+LGL + P P+ + + ++
Sbjct: 172 GKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAV 231
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
ACG Y + + ++ G + AFG++D+G+LGL + SE
Sbjct: 232 ACGQ-------------------HYTIASLRD-------GGVVAFGKNDHGQLGLDSTSE 265
Query: 410 PVTEPTPIPSLQDKTIT-SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
PV++PT + + D+ + ++CG + + +G +Y +G + QLG G + + P +
Sbjct: 266 PVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPAR 325
Query: 469 IEGKQLNNYTVLQVASGGQHSVILA 493
+E L + QVA G H+++L+
Sbjct: 326 VE--SLARMRITQVACGCYHTLVLS 348
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 27 VPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVG 77
VP L C T G V T G+ D GQLGLG M A VE L + +V G
Sbjct: 282 VPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHK-MHMARPARVESLARMRITQVACG 340
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVAL 135
HT+ L++DGKV+ +G N+ G LG E D PQ ++ K +++AG HSV L
Sbjct: 341 CYHTLVLSDDGKVFPFGRNNHGQLGLETSVDC-LSPQLISTLRNKTVTKVAAGFYHSVCL 399
Query: 136 L 136
+
Sbjct: 400 V 400
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 194/433 (44%), Gaps = 87/433 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V+ G G+ GQLGLG D E++ ++VE L+ NV VV G +++ + +DGK++TWG N
Sbjct: 7 VIAWGSGEDGQLGLGTD-EEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E P V K VQ + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLK------GEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G + G +++ P + + ++A+G H V+LT G + T G P G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQPW--PPG 181
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNY 261
I Q S +P++ + +++V +N + G++ A+G N Y
Sbjct: 182 DIKQIS----------------IPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D++ + F P ++ L D +A+G HS AL +EG++Y +GR ++G
Sbjct: 226 GQLGTGDTQPRS-----FPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 322 RLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG N P + L + I ++CG S A+
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL--------------------- 317
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDK------------TI 425
+G+I++FGR D+GRLG +P+ P IP L+ +
Sbjct: 318 -----TRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIA 372
Query: 426 TSIACGNCVSFAI 438
+ACG + AI
Sbjct: 373 KHVACGGRHTLAI 385
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 55/341 (16%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ S +++ G E GQLG T + + LEP ++ V G N+
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEE--KELASVVEALEP-------FNVRSVVGGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I G + +G N LG +S TP L+KSL+ K A G H LA
Sbjct: 52 AICDDGKLFTWGWNQRGTLGHPPETKTES------TPSLVKSLASVKIVQAAIGGWHCLA 105
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD----------KTITSIACGNCV 355
++ +G+ YA+G ++YG+ G EP + T P +D T+ +A G
Sbjct: 106 VDDQGRAYAWGGNEYGQCG----EEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTH 161
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYA 393
S + EG ++ WG + G+ K+ I L +G ++A
Sbjct: 162 SVVLTREGYVWTWG--QPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWA 219
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G ++YG+LG + ++P + P P+ L D T+ IA G S A+ +EG +YGWG G
Sbjct: 220 WGNNEYGQLGTGD-TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+LG G D + + + L ++QV+ GG HSV L +
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTR 319
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 189/428 (44%), Gaps = 66/428 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + + E L P + G +S+A+ +DG ++ WG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGW-- 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + TP ++S++ IV+ A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQRSAS-RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ + R RR + + L + + G ++ ++ +G + +G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAPQLTVRQV--AAGGTHSVVLTREGYVWTWG------- 175
Query: 265 GEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ G+ + P ++ L + + ++A G H+LAL +G ++A+G ++YG+L
Sbjct: 176 -----QPWPPGDIKQISIPVRVQGLENVR--LIAVGAFHNLALKEDGTLWAWGNNEYGQL 228
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P + P P+ L D T+ IA G S A
Sbjct: 229 GTGD-TQPRSFPIPVQGLDDLTLVDIAAGGWHSTA------------------------- 262
Query: 384 ILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L +EG++Y +GR ++GRLG N P + L + I ++CG S A+ +G
Sbjct: 263 -LTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDG 321
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMK-------IEGK-------QLNNYTVLQVASGGQH 488
++ +G G+ +LG G++ +P++ +EG+ + VA GG+H
Sbjct: 322 RIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRH 381
Query: 489 SVILAKPK 496
++ + + K
Sbjct: 382 TLAIVEWK 389
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K +L +++++V GG H+V LT DG++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRI 323
Query: 91 YTWGCNDEGALG 102
+++G D G LG
Sbjct: 324 FSFGRGDHGRLG 335
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 33/378 (8%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P ++V + S G VV T G+G+ GQLG G D +R + ++ L+ ++
Sbjct: 12 PVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHG-DAQDRLSPTILSTLEGLEIIS 70
Query: 74 VVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDS 130
V+ G HT+ +E VY+WG D G LG D F PQ + K QI+ GDS
Sbjct: 71 VICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDL-FTPQPIRQLHGLKIKQIACGDS 129
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
H +A+ +G V +WG R+ +G +GL P K+++ G I +A+GA+H +T
Sbjct: 130 HCLAVTMEGQVQSWG--RNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVT 187
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
G L G G LG R+ E +P K + + +S
Sbjct: 188 EDGELYGWGWGRYGNLG--------LGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVS 239
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G + +G + Y QLG D PH +++L + ++ G H++A+ S
Sbjct: 240 SSGGLYTYGWSKYGQLGHGD-------YADHLIPHQLEALQGSFISQISGGWRHTMAVTS 292
Query: 309 EGKIYAFGRHDYGRLGL-KNV--SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+GK+Y +G + +G++G+ NV S PV P+ ++ + I+CG + A+ +
Sbjct: 293 DGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPL----EQKVILISCGWRHTLAVTERQNV 348
Query: 366 YGWGMGNGYQLGNGKEDD 383
+ WG G QLGNG+ D
Sbjct: 349 FSWGRGTNGQLGNGECTD 366
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 159/352 (45%), Gaps = 48/352 (13%)
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
V ++ I++GA H V L S + T G E GQLG + R + +S LE E
Sbjct: 13 VRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGH--GDAQDRLSPTILSTLEGLE--- 67
Query: 231 KRKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
I V G +T + S + ++G ++ +LG +S + FTP I+ L
Sbjct: 68 ----IISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNS-------SDLFTPQPIRQL 116
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
K +A G H LA+ EG++ ++GR+ G+LGL + + P I + Q I
Sbjct: 117 HGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVPIKM 175
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL----------------------- 385
+A G + A+ +G LYGWG G LG G D L
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHT 235
Query: 386 ---NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+S G +Y +G YG+LG + ++ + P + +LQ I+ I+ G + A+ S+G
Sbjct: 236 ISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVTSDG 294
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
LYGWG Q+G G D P+++ K V+ ++ G +H++ + +
Sbjct: 295 KLYGWGWNKFGQVGVGDNVDRSSPVQV--KLPLEQKVILISCGWRHTLAVTE 344
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 176/410 (42%), Gaps = 59/410 (14%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISA 127
V+ + G H+V L V TWG ++G LG + P ++ + + + +
Sbjct: 15 RVLLISAGASHSVALLSGNVVCTWGRGEDGQLG-HGDAQDRLSPTILSTLEGLEIISVIC 73
Query: 128 GDSHSVALLEDGT-VYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IVKIASGA 181
G H++A E T VY+WG G G G G TP + + G I +IA G
Sbjct: 74 GADHTIAYSESHTDVYSWG-----WGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGD 128
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H + +T G + + G + GQLG T S ++ +F VP+K V G
Sbjct: 129 SHCLAVTMEGQVQSWGRNQNGQLGLGTTED-SLVPQKIQAFQ---GVPIKM-----VAAG 179
Query: 242 VYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+T ++ G + +G Y LG D + + P + +K M+A G
Sbjct: 180 AEHTAAVTEDGELYGWGWGRYGNLGLGDRKDR-------LVPEKVSLPHGEKMVMVACGW 232
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H+++++S G +Y +G YG+LG + ++ + P + +LQ I+ I+ G + A+
Sbjct: 233 RHTISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVT 291
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
S+G LYGWG Q+G G D S PV P+
Sbjct: 292 SDGKLYGWGWNKFGQVGVGDNVD-----------------------RSSPVQVKLPL--- 325
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
++ + I+CG + A+ ++ WG G QLGNG+ D P+ I+
Sbjct: 326 -EQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIK 374
>gi|389743006|gb|EIM84191.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 472
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 202/453 (44%), Gaps = 98/453 (21%)
Query: 38 VVLTCGQGDTGQLGLGP---DVMERKTFALVEDLDN--------VVEVVVGGMHTVCLTE 86
V+L G GD GQLGLG D+ + +L+ DL + +V GGMH++ L
Sbjct: 20 VLLVHGCGDCGQLGLGAGPVDISRPRVHSLLNDLVEASTMGPYGIEQVAAGGMHSLVLDS 79
Query: 87 DGKVYTWGCNDEGALGREAEG----DSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTV 141
+G V+++G ND+ ALGR +G E P V L + ++AGD S+AL +G V
Sbjct: 80 NGMVWSFGVNDDMALGRVTDGLHREAEEATPGLVPRLDDRVAFVAAGDCLSIALSAEGKV 139
Query: 142 YAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVK-----IASGADHFVMLTSRGNLLT 195
YAWG+F +S G +G G G K L+ + + + K IA G +H + L+ G + T
Sbjct: 140 YAWGTF-NSDGLLGFDGVIGHPKKVLQPKELPDLAKVPISSIACGNNHVLALSRSGRVYT 198
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSIL 254
G Q QLGR +RR S L P PL + I V G +++F ++S G +
Sbjct: 199 WGDGVQYQLGRKIL------SRRITSGLRPE--PLHLRDIVLVSAGSHHSFAVNSGGIVY 250
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD-----KKFTMLASGQHHSLALNSE 309
A+GLN Q G +D + TP +++L +A+G+HHSL L S
Sbjct: 251 AWGLNQMHQTGISDD--VGGAQSHVHTPTPVRALHPDLHLGAHVIQIAAGEHHSLFLLSN 308
Query: 310 GKIYAFGRHDYGRLGLKN-------------------------------VSEP------- 331
G+++ GR D+GRLGL + + EP
Sbjct: 309 GEVWGCGRADHGRLGLTDDHPVMLAIAAQYQHDLYSLRAANARESGLNIMDEPLPQLVPD 368
Query: 332 --VTEPT-----PIPSLQDKTITSIACGNCVS--------------FAIDSEGVLYGWGM 370
V EPT P P++ T + G+ VS A D +G LY WG
Sbjct: 369 SIVREPTRVYFPPPPTVDCPTPLVPSHGSPVSSTRILGLRSAERYNLAWDDQGFLYSWGE 428
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG 403
G QLG G + D ++ ++ DY +G
Sbjct: 429 GTTNQLGMGDDVDEASTPTRVCCKALRDYAVIG 461
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 165/419 (39%), Gaps = 108/419 (25%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
GI ++A+G H ++L S G + + G + LGR+T R PG VP
Sbjct: 63 GIEQVAAGGMHSLVLDSNGMVWSFGVNDDMALGRVTD-----GLHREAEEATPGLVPRLD 117
Query: 233 KHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ V G + +S++G + A+G N L D + P + L+
Sbjct: 118 DRVAFVAAGDCLSIALSAEGKVYAWGTFNSDGLLGFDGVIGHPKKV--LQPKELPDLAKV 175
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ +A G +H LAL+ G++Y +G +LG K +S +T L + I ++
Sbjct: 176 PISSIACGNNHVLALSRSGRVYTWGDGVQYQLGRKILSRRITSGLRPEPLHLRDIVLVSA 235
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------- 384
G+ SFA++S G++Y WG+ +Q G DD+
Sbjct: 236 GSHHSFAVNSGGIVYAWGLNQMHQ--TGISDDVGGAQSHVHTPTPVRALHPDLHLGAHVI 293
Query: 385 -----------LNSEGKIYAFGRHDYGRLGLKN--------------------------- 406
L S G+++ GR D+GRLGL +
Sbjct: 294 QIAAGEHHSLFLLSNGEVWGCGRADHGRLGLTDDHPVMLAIAAQYQHDLYSLRAANARES 353
Query: 407 ----VSEP---------VTEPT-----PIPSLQDKTITSIACGNCVS------------- 435
+ EP V EPT P P++ T + G+ VS
Sbjct: 354 GLNIMDEPLPQLVPDSIVREPTRVYFPPPPTVDCPTPLVPSHGSPVSSTRILGLRSAERY 413
Query: 436 -FAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
A D +G LY WG G QLG G + D+ P ++ K L +Y V+ ++GGQH +++
Sbjct: 414 NLAWDDQGFLYSWGEGTTNQLGMGDDVDEASTPTRVCCKALRDYAVIGASAGGQHVLLV 472
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 196/416 (47%), Gaps = 60/416 (14%)
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN 117
R T A D V V G +++ L DG V+ G N G LG + P+ V
Sbjct: 112 HRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTT-AARSAPRPVP 170
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI 177
+AV ++AG SH++AL DGTV+AWG+ + +G +G + TP+++ + G+V +
Sbjct: 171 GLSRAVAVAAGGSHALALCADGTVWAWGN--NGYGQLGNGSTAHRATPVQVPGLQGVVAV 228
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK--RKHI 235
A G H + L + G + G + GQLG G + P VP+ + +
Sbjct: 229 AGGYMHSLALCADGTVWAWGFNDYGQLG------------NGTTVHSPTPVPVPGLSQVV 276
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
G ++ + + G++ A+G N + QLGEA S Q++ P ++ L ++
Sbjct: 277 SVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVS-TQRT------KPGRVEGL--REVVA 327
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G +HSLA+ + G ++++G + G+LG + S P P+ L +TS+A G
Sbjct: 328 VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS-SARPAPVQGL--GAVTSVAAGGMH 384
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S A+ ++G ++A+GR++ G+LG + E T P
Sbjct: 385 SVAVQADGT--------------------------VWAWGRNEEGQLGHERAPERAT-PV 417
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+P LQ + ++A G S ++ + G L+ WG+ + QLG+ + L P+ G
Sbjct: 418 RVPGLQGE--VAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGD--SEAPLMPVPAPG 469
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 145/305 (47%), Gaps = 30/305 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G R T V L VV V G MH++ L DG V+ WG N
Sbjct: 192 GTVWAWGNNGYGQLGNG-STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFN 250
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
D G LG G + P V +P + V ++AG HS+AL DGTV+AWG+ + G +
Sbjct: 251 DYGQLG---NGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGN--NGFGQL 305
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G + P ++E + +V +A G H + + + G+L + G GQLG + S++R
Sbjct: 306 GEAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSAR 365
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
P V G+++ + + G++ A+G N QLG + +
Sbjct: 366 ----------PAPVQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERA- 414
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + L + +A+G +HSL++ + G ++A+G +D+G+LG SE
Sbjct: 415 ------TPVRVPGLQGE--VAVAAGFYHSLSVQAGGSLWAWGLNDFGQLG---DSEAPLM 463
Query: 335 PTPIP 339
P P P
Sbjct: 464 PVPAP 468
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 55/354 (15%)
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
+ TP + G+ +A G + + L + G + G GQLG T +A+R+A R
Sbjct: 113 RATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPR--- 167
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
VP + + G + + + G++ A+G N Y QLG + + T
Sbjct: 168 -----PVPGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRA-------T 215
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P + L + +A G HSLAL ++G ++A+G +DYG+LG V PTP+P
Sbjct: 216 PVQVPGL--QGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTT---VHSPTPVPVP 270
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGN---------GKEDDI------- 384
+ S+A G S A+ ++G ++ WG NG+ QLG G+ + +
Sbjct: 271 GLSQVVSVAAGGFHSLALCADGTVWAWG-NNGFGQLGEAVSTQRTKPGRVEGLREVVAVA 329
Query: 385 --------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
+ + G ++++G + G+LG + S P P+ L +TS+A G S
Sbjct: 330 GGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS-SARPAPVQGL--GAVTSVAAGGMHSV 386
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ ++G ++ WG QLG+ + + P+++ G Q + VA+G HS+
Sbjct: 387 AVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGE----VAVAAGFYHSL 436
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GG + + G +GQLG G A V+ L V V GGMH+V + DG V+ WG
Sbjct: 341 GGSLWSWGNNYSGQLGNG-SFSSSARPAPVQGLGAVTSVAAGGMHSVAVQADGTVWAWGR 399
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
N+EG LG E P V + V ++AG HS+++ G+++AWG
Sbjct: 400 NEEGQLGHE-RAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWG 448
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 174/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG +
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEAD 268
+ + S L +P + V G ++F+ + G+I +G N + QLG D
Sbjct: 175 CQKQTSPQLIKSLL---GIPFMQ-----VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 227 ENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 280 SHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ G G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ EG+ + +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL ++G + WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ EG + WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 184/403 (45%), Gaps = 65/403 (16%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
G HT+ + DG V+ WG N G LG + + +NL + I+ G++H+VAL
Sbjct: 713 GNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM-IAGGENHTVALRS 771
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
DGT++ WG + +G +G + +P+++ +++ +++G +H + L S G + G
Sbjct: 772 DGTLHTWG--YNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFG 829
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSI 253
GQLG T S P++ K + V ++ + S G++
Sbjct: 830 YNGYGQLGDGTTSSQ--------------RTPVQVKDLTGVVAIAAGKDFSLALKSDGTV 875
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N Y +LG + T P + L+D K +A+G +H +AL +G ++
Sbjct: 876 WSWGQNTYGELGNGTT-------TRSSVPVQVALLTDVK--AIAAGDYHGVALKKDGSVF 926
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
A+G + G LG S +++ TP+ S I IA G + A+ S+G ++ WG NG
Sbjct: 927 AWGYNGNGELGN---SSTISQSTPVQSGVTG-IKGIAAGPYHTLALKSDGTVWSWGY-NG 981
Query: 374 Y-QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
Y QLGNG N S V P IP L +I SIA G
Sbjct: 982 YGQLGNG-------------------------NNTSRSV--PAAIPGL--ASIASIAAGE 1012
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
S A ++G+LY WG QLGNG D P K+ G +N
Sbjct: 1013 NQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGPNIN 1055
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 176/357 (49%), Gaps = 47/357 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G V +L + + G HTV L DG ++TWG N
Sbjct: 723 GTVWGWGYNGHGQLGTGTS-NSTSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYN 781
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG ++ + + P V+ +SAG++HS+AL DGTV+A+G + +G +G
Sbjct: 782 GYGQLGDDST-TTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFG--YNGYGQLGD 838
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRN 215
Q+TP++++ ++G+V IA+G D + L S G + + G G+LG T RS+
Sbjct: 839 GTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSS--- 895
Query: 216 ARRGMSFLEPGEVPLKRKHIDDV---FTGVYN-TFISSKGSILAFGLNNYSQLGEADSEV 271
VP++ + DV G Y+ + GS+ A+G N +LG + +
Sbjct: 896 ------------VPVQVALLTDVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTIS 943
Query: 272 Q----KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-K 326
Q +SG T IK +A+G +H+LAL S+G ++++G + YG+LG
Sbjct: 944 QSTPVQSGVTG------IKG--------IAAGPYHTLALKSDGTVWSWGYNGYGQLGNGN 989
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
N S V P IP L +I SIA G S A ++G+LY WG QLGNG D
Sbjct: 990 NTSRSV--PAAIPGL--ASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 1042
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 66/339 (19%)
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR----RGMSFLEPGEVPLKRKHIDD 237
+H + + S G + G GQLG T S S + GM + GE
Sbjct: 714 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGEN--------- 764
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+ + S G++ +G N Y QLG+ DS T ++P + +L++ +T ++
Sbjct: 765 -----HTVALRSDGTLHTWGYNGYGQLGD-DS------TTTRYSPVQVSTLTN--WTAVS 810
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVS 356
+G++HSLAL S+G ++AFG + YG+LG S ++ TP+ ++D T + +IA G S
Sbjct: 811 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTS---SQRTPV-QVKDLTGVVAIAAGKDFS 866
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKE------------DDI------------LNSEGKIY 392
A+ S+G ++ WG +LGNG D+ L +G ++
Sbjct: 867 LALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVF 926
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
A+G + G LG S +++ TP+ S I IA G + A+ S+G ++ WG NG
Sbjct: 927 AWGYNGNGELGN---SSTISQSTPVQSGVTG-IKGIAAGPYHTLALKSDGTVWSWGY-NG 981
Query: 453 Y-QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
Y QLGNG P I G ++ +A+G S+
Sbjct: 982 YGQLGNGNNTSRSVPAAIPGLA----SIASIAAGENQSI 1016
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
TL K+ G V + G GQLG G + R A + L ++ + G ++ DG
Sbjct: 965 TLALKSDG-TVWSWGYNGYGQLGNGNNT-SRSVPAAIPGLASIASIAAGENQSIAYGNDG 1022
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLED 138
+Y+WG N G LG D+ N+P K + I+ D+ + A + D
Sbjct: 1023 ILYSWGRNANGQLGNGTTVDT-------NVPHKVIGPNINPADTTAPAAVSD 1067
>gi|229594590|ref|XP_001032743.3| regulator of chromosome condensation, putative [Tetrahymena
thermophila]
gi|225566766|gb|EAR85080.3| regulator of chromosome condensation, putative [Tetrahymena
thermophila SB210]
Length = 726
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 170/351 (48%), Gaps = 51/351 (14%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA---EGDSEFIPQTVNLPKKAVQISA 127
VV++ G +HT+ LT G VY+ G ND+GALGR A + DS+ Q V +P K I+A
Sbjct: 131 VVQIACGSLHTLILTNLGLVYSQGQNDDGALGRPANDEDEDSDKKAQLVQIPIKVNMIAA 190
Query: 128 GDSHSVAL-LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS----GIVKIASGAD 182
GDSHSVA E G + WG++R++ + L +TP+++ + + KI SG
Sbjct: 191 GDSHSVAANSELGVCFFWGTYRNTEKA-NLAPPA--RTPVRVGNKELYRKKLTKILSGQQ 247
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQ-RSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H ++LT G L G P+ G +GR+ + R A + + + + D++TG
Sbjct: 248 HSLVLTDEGELFGWGDPDMGVVGRMPKTRHGYEQALKVAK--------ITQIKVSDIYTG 299
Query: 242 VYNTFI-----------------SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
++F+ ++ + ++GLNN+ QLG E + F P
Sbjct: 300 GRHSFLKRQIKKAIPASDGVEEQKAEYAYYSWGLNNFGQLGLDLPEERHLD--VVFEPTQ 357
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE--PV------TEPT 336
IK + + G+ HS+AL +G +Y FGR+D G+ GL V + PV P
Sbjct: 358 IKFFDNLEVKKFCGGESHSIALLEDGTVYGFGRNDIGQFGLGKVKDNHPVYGEIKEINPK 417
Query: 337 PIP----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
PI K I +I G S+A + G Y WG G+ + LGN K++D
Sbjct: 418 PIKIDTFPADHKKIINIWAGANYSYAQEETGQCYSWGFGSNFVLGNRKDED 468
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 148/379 (39%), Gaps = 77/379 (20%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+V+IA G+ H ++LT+ G + + G + G LGR + ++ ++P+K
Sbjct: 131 VVQIACGSLHTLILTNLGLVYSQGQNDDGALGRPANDEDEDSDKKAQLV----QIPIK-- 184
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI--KSLSDK 291
++ + G ++ ++ + F Y +A+ TP + K L K
Sbjct: 185 -VNMIAAGDSHSVAANSELGVCFFWGTYRNTEKANLAPPAR------TPVRVGNKELYRK 237
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQDKTITSIA 350
K T + SGQ HSL L EG+++ +G D G +G + + + + ++ I
Sbjct: 238 KLTKILSGQQHSLVLTDEGELFGWGDPDMGVVGRMPKTRHGYEQALKVAKITQIKVSDIY 297
Query: 351 CGNCVSF----------AID------SEGVLYGWGMGNGYQLG----------------- 377
G SF A D +E Y WG+ N QLG
Sbjct: 298 TGGRHSFLKRQIKKAIPASDGVEEQKAEYAYYSWGLNNFGQLGLDLPEERHLDVVFEPTQ 357
Query: 378 -------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE--PV------TEPT 415
G+ I L +G +Y FGR+D G+ GL V + PV P
Sbjct: 358 IKFFDNLEVKKFCGGESHSIALLEDGTVYGFGRNDIGQFGLGKVKDNHPVYGEIKEINPK 417
Query: 416 PIP----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE--PMKI 469
PI K I +I G S+A + G Y WG G+ + LGN K++D E P I
Sbjct: 418 PIKIDTFPADHKKIINIWAGANYSYAQEETGQCYSWGFGSNFVLGNRKDEDEDEYNPYVI 477
Query: 470 EGKQLNNYTVLQVASGGQH 488
N A G QH
Sbjct: 478 PRDFYKNEIPTDFAMGTQH 496
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 95/269 (35%), Gaps = 65/269 (24%)
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
TS N TA E+ Q+ + + + S N +P +V K T VYN
Sbjct: 51 TSEQNNSTAMQAEEEQVNKKEENNNSHN--------QPPKVDAKPADSLQELTKVYN--- 99
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+G Q DS + P+L L + +A G H+L L
Sbjct: 100 --------YGSTEMDQFWLPDSRSETR------RPYLNACLKNHVVVQIACGSLHTLILT 145
Query: 308 SEGKIYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+ G +Y+ G++D G LG S+ + IP + IA G+ S A +SE
Sbjct: 146 NLGLVYSQGQNDDGALGRPANDEDEDSDKKAQLVQIPI----KVNMIAAGDSHSVAANSE 201
Query: 363 -GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI--PS 419
GV + WG Y N++ P P +
Sbjct: 202 LGVCFFWGT----------------------------YRNTEKANLAPPARTPVRVGNKE 233
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWG 448
L K +T I G S + EG L+GWG
Sbjct: 234 LYRKKLTKILSGQQHSLVLTDEGELFGWG 262
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 196/416 (47%), Gaps = 60/416 (14%)
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN 117
R T A D V V G +++ L DG V+ G N G LG + P+ V
Sbjct: 109 HRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTT-AARSAPRPVP 167
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI 177
+AV ++AG SH++AL DGTV+AWG+ + +G +G + TP+++ + G+V +
Sbjct: 168 GLSRAVAVAAGGSHALALCADGTVWAWGN--NGYGQLGNGSTAHRATPVQVPGLQGVVAV 225
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK--RKHI 235
A G H + L + G + G + GQLG G + P VP+ + +
Sbjct: 226 AGGYMHSLALCADGTVWAWGFNDYGQLG------------NGTTVHSPTPVPVPGLSQVV 273
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
G ++ + + G++ A+G N + QLGEA S Q++ P ++ L ++
Sbjct: 274 SVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVS-TQRT------KPGRVEGL--REVVA 324
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G +HSLA+ + G ++++G + G+LG + S P P+ L +TS+A G
Sbjct: 325 VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS-SARPAPVQGL--GAVTSVAAGGMH 381
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S A+ ++G ++A+GR++ G+LG + E T P
Sbjct: 382 SVAVQADGT--------------------------VWAWGRNEEGQLGHERAPERAT-PV 414
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+P LQ + ++A G S ++ + G L+ WG+ + QLG+ + L P+ G
Sbjct: 415 RVPGLQGE--VAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGD--SEAPLMPVPAPG 466
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 145/305 (47%), Gaps = 30/305 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G R T V L VV V G MH++ L DG V+ WG N
Sbjct: 189 GTVWAWGNNGYGQLGNG-STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFN 247
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
D G LG G + P V +P + V ++AG HS+AL DGTV+AWG+ + G +
Sbjct: 248 DYGQLG---NGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGN--NGFGQL 302
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G + P ++E + +V +A G H + + + G+L + G GQLG + S++R
Sbjct: 303 GEAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSAR 362
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
P V G+++ + + G++ A+G N QLG + +
Sbjct: 363 ----------PAPVQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERA- 411
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + L + +A+G +HSL++ + G ++A+G +D+G+LG SE
Sbjct: 412 ------TPVRVPGLQGE--VAVAAGFYHSLSVQAGGSLWAWGLNDFGQLG---DSEAPLM 460
Query: 335 PTPIP 339
P P P
Sbjct: 461 PVPAP 465
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 55/354 (15%)
Query: 162 QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
+ TP + G+ +A G + + L + G + G GQLG T +A+R+A R
Sbjct: 110 RATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPR--- 164
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
VP + + G + + + G++ A+G N Y QLG + + T
Sbjct: 165 -----PVPGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRA-------T 212
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P + L + +A G HSLAL ++G ++A+G +DYG+LG V PTP+P
Sbjct: 213 PVQVPGL--QGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTT---VHSPTPVPVP 267
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGN---------GKEDDI------- 384
+ S+A G S A+ ++G ++ WG NG+ QLG G+ + +
Sbjct: 268 GLSQVVSVAAGGFHSLALCADGTVWAWG-NNGFGQLGEAVSTQRTKPGRVEGLREVVAVA 326
Query: 385 --------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
+ + G ++++G + G+LG + S P P+ L +TS+A G S
Sbjct: 327 GGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS-SARPAPVQGL--GAVTSVAAGGMHSV 383
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ ++G ++ WG QLG+ + + P+++ G Q + VA+G HS+
Sbjct: 384 AVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGE----VAVAAGFYHSL 433
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GG + + G +GQLG G A V+ L V V GGMH+V + DG V+ WG
Sbjct: 338 GGSLWSWGNNYSGQLGNG-SFSSSARPAPVQGLGAVTSVAAGGMHSVAVQADGTVWAWGR 396
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
N+EG LG E P V + V ++AG HS+++ G+++AWG
Sbjct: 397 NEEGQLGHE-RAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWG 445
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 184/403 (45%), Gaps = 65/403 (16%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
G HT+ + DG V+ WG N G LG + + +NL + I+ G++H+VAL
Sbjct: 638 GNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM-IAGGENHTVALRS 696
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
DGT++ WG + +G +G + +P+++ +++ +++G +H + L S G + G
Sbjct: 697 DGTLHTWG--YNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFG 754
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSI 253
GQLG T S P++ K + V ++ + S G++
Sbjct: 755 YNGYGQLGDGTTSSQ--------------RTPVQVKDLTGVVAIAAGKDFSLALKSDGTV 800
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N Y +LG + T P + L+D K +A+G +H +AL +G ++
Sbjct: 801 WSWGQNTYGELGNGTT-------TRSSVPVQVALLTDVK--AIAAGDYHGVALKKDGSVF 851
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
A+G + G LG S +++ TP+ S I IA G + A+ S+G ++ WG NG
Sbjct: 852 AWGYNGNGELGN---SSTISQSTPVQSGVTG-IKGIAAGPYHTLALKSDGTVWSWGY-NG 906
Query: 374 Y-QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
Y QLGNG N S V P IP L +I SIA G
Sbjct: 907 YGQLGNG-------------------------NNTSRSV--PAAIPGL--ASIASIAAGE 937
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
S A ++G+LY WG QLGNG D P K+ G +N
Sbjct: 938 NQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGPNIN 980
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 175/357 (49%), Gaps = 47/357 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G V +L + + G HTV L DG ++TWG N
Sbjct: 648 GTVWGWGYNGHGQLGTGTS-NSTSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYN 706
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG ++ + + P V+ +SAG++HS+AL DGTV+A+G + +G +G
Sbjct: 707 GYGQLGDDST-TTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFG--YNGYGQLGD 763
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRN 215
Q+TP++++ ++G+V IA+G D + L S G + + G G+LG T RS
Sbjct: 764 GTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRS---- 819
Query: 216 ARRGMSFLEPGEVPLKRKHIDDV---FTGVYN-TFISSKGSILAFGLNNYSQLGEADSEV 271
VP++ + DV G Y+ + GS+ A+G N +LG + +
Sbjct: 820 -----------SVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTIS 868
Query: 272 Q----KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-K 326
Q +SG T IK +A+G +H+LAL S+G ++++G + YG+LG
Sbjct: 869 QSTPVQSGVTG------IKG--------IAAGPYHTLALKSDGTVWSWGYNGYGQLGNGN 914
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
N S V P IP L +I SIA G S A ++G+LY WG QLGNG D
Sbjct: 915 NTSRSV--PAAIPGL--ASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 967
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 66/339 (19%)
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR----RGMSFLEPGEVPLKRKHIDD 237
+H + + S G + G GQLG T S S + GM + GE H
Sbjct: 639 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGE-----NHT-- 691
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+ S G++ +G N Y QLG+ DS T ++P + +L++ +T ++
Sbjct: 692 -------VALRSDGTLHTWGYNGYGQLGD-DS------TTTRYSPVQVSTLTN--WTAVS 735
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVS 356
+G++HSLAL S+G ++AFG + YG+LG S ++ TP+ ++D T + +IA G S
Sbjct: 736 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTS---SQRTPV-QVKDLTGVVAIAAGKDFS 791
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKE------------DDI------------LNSEGKIY 392
A+ S+G ++ WG +LGNG D+ L +G ++
Sbjct: 792 LALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVF 851
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
A+G + G LG S +++ TP+ S I IA G + A+ S+G ++ WG NG
Sbjct: 852 AWGYNGNGELGN---SSTISQSTPVQSGVTG-IKGIAAGPYHTLALKSDGTVWSWGY-NG 906
Query: 453 Y-QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
Y QLGNG P I G ++ +A+G S+
Sbjct: 907 YGQLGNGNNTSRSVPAAIPGLA----SIASIAAGENQSI 941
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
TL K+ G V + G GQLG G + R A + L ++ + G ++ DG
Sbjct: 890 TLALKSDG-TVWSWGYNGYGQLGNGNNT-SRSVPAAIPGLASIASIAAGENQSIAYGNDG 947
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLED 138
+Y+WG N G LG D+ N+P K + I+ D+ + A + D
Sbjct: 948 ILYSWGRNANGQLGNGTTVDT-------NVPHKVIGPNINPADTTAPAAVSD 992
>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
Length = 1019
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 169/352 (48%), Gaps = 36/352 (10%)
Query: 39 VLTCGQGDTGQLG--LGPDVME--RKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYT 92
+L CG GQLG L ++ + D+D V V G HTV LT+DGK+++
Sbjct: 5 LLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 93 WGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G N +G LGR EG P + K +QISAG SH+V++ +DG V+AWGS +
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS--NE 122
Query: 151 HGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
HG +G++ + Q TP +++ ++ IV++ASG++H + L G + G EQ GR
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG--EQAD-GRCIH 179
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
R G VP+ R V G + +S+ G++ +G NN +LG D
Sbjct: 180 RPEPVEQLSG--------VPIVR-----VLAGARHCLALSASGAVFTWGQNNSGELGIDD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
Q S + + A G +H++ L G+ ++FG G+ G
Sbjct: 227 LRPQTSVQH-------VHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
E T PT + L +T IA G C + AI +G Y +G+ + QLGNGK
Sbjct: 280 VEKRTNPTAVSDLIGSHVTRIAAGACHTIAI-CKGAPYPFGLNSSGQLGNGK 330
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 31/298 (10%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
++++ G HTV +T+DG+V+ WG N+ G LG E++ + P+ V VQ+++G +
Sbjct: 96 IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSN 155
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
H +AL E G V+ WG D G I + P +E +SG IV++ +GA H + L+
Sbjct: 156 HCIALDEGGRVFVWGEQAD--------GRCIHR-PEPVEQLSGVPIVRVLAGARHCLALS 206
Query: 189 SRGNLLTAGCPEQGQLGRITQR-SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + T G G+LG R S M L E H +
Sbjct: 207 ASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNH---------TVLL 257
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G +FG + Q G +V+K N P + L T +A+G H++A+
Sbjct: 258 THCGRTFSFGSDALGQCGFG-KKVEKRTN-----PTAVSDLIGSHVTRIAAGACHTIAI- 310
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+G Y FG + G+LG + +T+ TP + + +T + G +F + S G +
Sbjct: 311 CKGAPYPFGLNSSGQLGNGKI---MTQSTPRKTDELDHVTGVFAGYHQTFFVRSSGTI 365
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 127/316 (40%), Gaps = 54/316 (17%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVP 229
+ + + G H V LT G + + G GQLGR T+ S S S + ++
Sbjct: 41 TAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQIS 100
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
R H ++ G + A+G N + QLG +S+ G TP ++ ++
Sbjct: 101 AGRSH---------TVSVTDDGRVFAWGSNEHGQLG-MESKFTWQG-----TPRRVQEIN 145
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
D +ASG +H +AL+ G+++ +G GR + P P+ L I +
Sbjct: 146 D--IVQVASGSNHCIALDEGGRVFVWGEQADGRC--------IHRPEPVEQLSGVPIVRV 195
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLG--------------------------NGKEDD 383
G A+ + G ++ WG N +LG
Sbjct: 196 LAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTV 255
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+L G+ ++FG G+ G E T PT + L +T IA G C + AI +G
Sbjct: 256 LLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAI-CKGA 314
Query: 444 LYGWGMGNGYQLGNGK 459
Y +G+ + QLGNGK
Sbjct: 315 PYPFGLNSSGQLGNGK 330
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
T + G+ H++ L +GK+++ G + G+LG + +E P+ I I+ G
Sbjct: 44 TSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGR 103
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKE-------------DDI------------LNSE 388
+ ++ +G ++ WG QLG + +DI L+
Sbjct: 104 SHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEG 163
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G+++ +G GR + P P+ L I + G A+ + G ++ WG
Sbjct: 164 GRVFVWGEQADGRC--------IHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWG 215
Query: 449 MGNGYQLGNGKEDDILEPMKIEG-KQLNNYTVLQVASGGQHSVILA 493
N +LG DD+ ++ Q++ V++ A G H+V+L
Sbjct: 216 QNNSGELGI---DDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLT 258
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 187/380 (49%), Gaps = 35/380 (9%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK-----TFALVEDL 68
E P + V + S GGVV + G+G+ GQLG G D +R T A +
Sbjct: 16 EAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHG-DAEDRPVPTVLTAAFDDAP 74
Query: 69 DNVVEVVV-GGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQ 124
V VV+ G HT + E+ ++Y+WG D G LG D F PQ + + + Q
Sbjct: 75 GGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV-FNPQPIQALQGVRITQ 133
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGAD 182
I+ GDSH +A+ G V++WG R+ +G +GL P K+++ G+ VK IA+GA+
Sbjct: 134 IACGDSHCLAVTVAGHVHSWG--RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 191
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG 241
H +T G+L G G LG R+ R L P +V + + + V G
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGL-----GDRDDR-----LIPEKVSSVNGQKMVLVACG 241
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+T +SS GSI +G + Y QLG D E PH +++L D + ++ G
Sbjct: 242 WRHTITVSSSGSIYTYGWSKYGQLGHGDFEDH-------LVPHKLEALKDTTISQISGGW 294
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H++AL ++GK+Y +G + +G++G+ + +E P + ++ + +ACG + A+
Sbjct: 295 RHTMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 353
Query: 361 SEGVLYGWGMGNGYQLGNGK 380
++ WG G QLG+G+
Sbjct: 354 EAKNVFSWGRGTSGQLGHGE 373
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 162/352 (46%), Gaps = 46/352 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE-PGEVPLKR 232
+V I++GA H V L S G + + G E GQLG +F + PG V
Sbjct: 22 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA--- 78
Query: 233 KHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
V G +T + + + ++G ++ +LG +S + F P I++L
Sbjct: 79 ---SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS-------SDVFNPQPIQALQG 128
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ T +A G H LA+ G ++++GR+ G+LGL N + + P I + + + IA
Sbjct: 129 VRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIA 187
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------- 385
G + A+ +G LYGWG G LG G DD L
Sbjct: 188 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTIT 247
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+S G IY +G YG+LG + + + P + +L+D TI+ I+ G + A+ ++G L
Sbjct: 248 VSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAADGKL 306
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YGWG Q+G G +D P+++ N V+QVA G +H++ L + K
Sbjct: 307 YGWGWNKFGQVGVGDNEDHCSPVQVNFP--NEQKVVQVACGWRHTLALTEAK 356
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 179/435 (41%), Gaps = 77/435 (17%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--------- 120
+VV + G H+V L G V +WG ++G LG GD+E P L
Sbjct: 21 SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGH---GDAEDRPVPTVLTAAFDDAPGGV 77
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IV 175
+V I D + E+ +Y+WG G G G G P ++++ G I
Sbjct: 78 ASVVICGADHTTAYSDEELQLYSWG-----WGDFGRLGHGNSSDVFNPQPIQALQGVRIT 132
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+IA G H + +T G++ + G + GQL G+ E +P K +
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQL--------------GLGNTEDSLLPQKIQAF 178
Query: 236 DDVFTGV------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ V + + ++ G + +G Y LG D + + P + S++
Sbjct: 179 EGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDR-------LIPEKVSSVN 231
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K ++A G H++ ++S G IY +G YG+LG + + + P + +L+D TI+ I
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQI 290
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+ G + A+ ++G LYGWG Q+G G +D +
Sbjct: 291 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCS----------------------- 327
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
P + ++ + +ACG + A+ ++ WG G QLG+G+ D P I
Sbjct: 328 ----PVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 383
Query: 470 EGKQLNNYTVLQVAS 484
+ + Q+ S
Sbjct: 384 DALSSDGSACKQLES 398
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++ ++++G HS+AL S G + ++GR + G+LG + E P+P++
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-----AEDRPVPTVLTAAFDD- 72
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
A G S I G + E ++Y++G D+GRLG N S+
Sbjct: 73 APGGVASVVI----------------CGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD 116
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P PI +LQ IT IACG+ A+ G ++ WG QLG G +D L P KI
Sbjct: 117 -VFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKI 175
Query: 470 EGKQLNNYTVLQVASGGQHSVILAK 494
+ V +A+G +H+ + +
Sbjct: 176 QA--FEGVRVKMIAAGAEHTAAVTE 198
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 187/380 (49%), Gaps = 35/380 (9%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK-----TFALVEDL 68
E P + V + S GGVV + G+G+ GQLG G D +R T A +
Sbjct: 21 EAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHG-DAEDRPVPTVLTAAFDDAP 79
Query: 69 DNVVEVVV-GGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQ 124
V VV+ G HT + E+ ++Y+WG D G LG D F PQ + + + Q
Sbjct: 80 GGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV-FNPQPIQALQGVRITQ 138
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGAD 182
I+ GDSH +A+ G V++WG R+ +G +GL P K+++ G+ VK IA+GA+
Sbjct: 139 IACGDSHCLAVTVAGHVHSWG--RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 196
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG 241
H +T G+L G G LG R+ R L P +V + + + V G
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGL-----GDRDDR-----LIPEKVSSVNGQKMVLVACG 246
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+T +SS GSI +G + Y QLG D E PH +++L D + ++ G
Sbjct: 247 WRHTITVSSSGSIYTYGWSKYGQLGHGDFEDH-------LVPHKLEALKDTTISQISGGW 299
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H++AL ++GK+Y +G + +G++G+ + +E P + ++ + +ACG + A+
Sbjct: 300 RHTMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 358
Query: 361 SEGVLYGWGMGNGYQLGNGK 380
++ WG G QLG+G+
Sbjct: 359 EAKNVFSWGRGTSGQLGHGE 378
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 162/352 (46%), Gaps = 46/352 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE-PGEVPLKR 232
+V I++GA H V L S G + + G E GQLG +F + PG V
Sbjct: 27 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA--- 83
Query: 233 KHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
V G +T + + + ++G ++ +LG +S + F P I++L
Sbjct: 84 ---SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS-------SDVFNPQPIQALQG 133
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ T +A G H LA+ G ++++GR+ G+LGL N + + P I + + + IA
Sbjct: 134 VRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIA 192
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------- 385
G + A+ +G LYGWG G LG G DD L
Sbjct: 193 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTIT 252
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+S G IY +G YG+LG + + + P + +L+D TI+ I+ G + A+ ++G L
Sbjct: 253 VSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAADGKL 311
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
YGWG Q+G G +D P+++ N V+QVA G +H++ L + K
Sbjct: 312 YGWGWNKFGQVGVGDNEDHCSPVQVNFP--NEQKVVQVACGWRHTLALTEAK 361
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 179/435 (41%), Gaps = 77/435 (17%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--------- 120
+VV + G H+V L G V +WG ++G LG GD+E P L
Sbjct: 26 SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGH---GDAEDRPVPTVLTAAFDDAPGGV 82
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IV 175
+V I D + E+ +Y+WG G G G G P ++++ G I
Sbjct: 83 ASVVICGADHTTAYSDEELQLYSWG-----WGDFGRLGHGNSSDVFNPQPIQALQGVRIT 137
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+IA G H + +T G++ + G + GQL G+ E +P K +
Sbjct: 138 QIACGDSHCLAVTVAGHVHSWGRNQNGQL--------------GLGNTEDSLLPQKIQAF 183
Query: 236 DDVFTGV------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ V + + ++ G + +G Y LG D + + P + S++
Sbjct: 184 EGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDR-------LIPEKVSSVN 236
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K ++A G H++ ++S G IY +G YG+LG + + + P + +L+D TI+ I
Sbjct: 237 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQI 295
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+ G + A+ ++G LYGWG Q+G G +D +
Sbjct: 296 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCS----------------------- 332
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
P + ++ + +ACG + A+ ++ WG G QLG+G+ D P I
Sbjct: 333 ----PVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 388
Query: 470 EGKQLNNYTVLQVAS 484
+ + Q+ S
Sbjct: 389 DALSSDGSACKQLES 403
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++ ++++G HS+AL S G + ++GR + G+LG + E P+P++
Sbjct: 24 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-----AEDRPVPTVLTAAFDD- 77
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
A G S I G + E ++Y++G D+GRLG N S+
Sbjct: 78 APGGVASVVI----------------CGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD 121
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P PI +LQ IT IACG+ A+ G ++ WG QLG G +D L P KI
Sbjct: 122 -VFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKI 180
Query: 470 EGKQLNNYTVLQVASGGQHSVILAK 494
+ V +A+G +H+ + +
Sbjct: 181 QA--FEGVRVKMIAAGAEHTAAVTE 203
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG +
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CQKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|390601153|gb|EIN10547.1| RCC1/BLIP-II [Punctularia strigosozonata HHB-11173 SS5]
Length = 554
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 198/443 (44%), Gaps = 84/443 (18%)
Query: 38 VVLTCGQGDTGQLGLGPDVM-----ERKTFALVEDLDN---------VVEVVVGGMHTVC 83
++ G G+ GQLG+G +++ +K + E +++ + + GGMHT+
Sbjct: 122 ILFGWGAGNFGQLGMGSELLGDYDKPKKNPWVTEKVEDGAFGSEDAGLETIAAGGMHTLL 181
Query: 84 LTEDGKVYTWGCNDEGALGR--------EAEGDSEFIPQTVNLPK----------KAVQI 125
+ E G V+T G NDEGALGR + EG+ + + +P +AV++
Sbjct: 182 VDERGTVWTCGVNDEGALGRVTVGVPNPDKEGEFLDVDELTAVPHPVQSLVDEDFRAVRV 241
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK----TPLKLESVSG------IV 175
+AGDS S A+ G + WGSFR + G++G E ++ L L + + V
Sbjct: 242 AAGDSVSAAISSTGELRVWGSFRGNQGALGFSNEQQRQFQPAAILNLHNRAADQHPEKFV 301
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+A+G +H V+LT+ G++ T G E+GQLGR RR + P + L +
Sbjct: 302 SVAAGNNHLVILTTHGHIYTLGAGEEGQLGRKVIE------RRKIHGTAPERIILGTRTR 355
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
V G N + G + A+GLN Q G G P + LS ++
Sbjct: 356 KAVVVGAGNNHSFAVDQTGDVWAWGLNTKGQTGTGYRHSGIDGE--VHVPKRVIGLSKEE 413
Query: 293 F-----TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------PTP-- 337
+ G HH+L L S GK+YA GR + G+LGL + +P E PTP
Sbjct: 414 LGGDTVVEIVGGDHHTLFLTSNGKVYACGRSNDGQLGLAD-DDPAFEDREFEDFLPTPAL 472
Query: 338 --IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ILNSEG 389
P +D + I+ G + A+ + G LY WG +LG G++ + ++ EG
Sbjct: 473 VTFPDAEDP-VAHISAGTHNNLAVTAGGALYAWGAQTQGELGVGEDVEAKTPKVVVRKEG 531
Query: 390 KIYAF------GRHDYGRLGLKN 406
+A G+H L KN
Sbjct: 532 GSWAAIVAACGGQHTLALLRKKN 554
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 189/443 (42%), Gaps = 99/443 (22%)
Query: 141 VYAWGSFRDSHGSMGLKGEGI------QKTPLKLESV---------SGIVKIASGADHFV 185
++ WG+ + G +G+ E + +K P E V +G+ IA+G H +
Sbjct: 123 LFGWGA--GNFGQLGMGSELLGDYDKPKKNPWVTEKVEDGAFGSEDAGLETIAAGGMHTL 180
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE---VPLKRKH-IDDVFTG 241
++ RG + T G ++G LGR+T N + FL+ E VP + +D+ F
Sbjct: 181 LVDERGTVWTCGVNDEGALGRVT--VGVPNPDKEGEFLDVDELTAVPHPVQSLVDEDFRA 238
Query: 242 V-------YNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK- 291
V + ISS G + +G N LG ++ + ++ F P I +L ++
Sbjct: 239 VRVAAGDSVSAAISSTGELRVWGSFRGNQGALGFSNEQQRQ------FQPAAILNLHNRA 292
Query: 292 ------KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP----IPSL 341
KF +A+G +H + L + G IY G + G+LG K + T I
Sbjct: 293 ADQHPEKFVSVAAGNNHLVILTTHGHIYTLGAGEEGQLGRKVIERRKIHGTAPERIILGT 352
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGM------GNGYQ--------------LGNGKE 381
+ + + GN SFA+D G ++ WG+ G GY+ +G KE
Sbjct: 353 RTRKAVVVGAGNNHSFAVDQTGDVWAWGLNTKGQTGTGYRHSGIDGEVHVPKRVIGLSKE 412
Query: 382 DD----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------PTP- 416
+ L S GK+YA GR + G+LGL + +P E PTP
Sbjct: 413 ELGGDTVVEIVGGDHHTLFLTSNGKVYACGRSNDGQLGLAD-DDPAFEDREFEDFLPTPA 471
Query: 417 ---IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P +D + I+ G + A+ + G LY WG +LG G++ + P + K+
Sbjct: 472 LVTFPDAEDP-VAHISAGTHNNLAVTAGGALYAWGAQTQGELGVGEDVEAKTPKVVVRKE 530
Query: 474 LNNYTVLQVASGGQHSVILAKPK 496
++ + A GGQH++ L + K
Sbjct: 531 GGSWAAIVAACGGQHTLALLRKK 553
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 150/355 (42%), Gaps = 71/355 (20%)
Query: 37 GVVLTCGQGDTGQLGL------GPD------------VMERKTFALVEDLDNVVEVVVGG 78
G V TCG D G LG PD + +LV++ V V G
Sbjct: 186 GTVWTCGVNDEGALGRVTVGVPNPDKEGEFLDVDELTAVPHPVQSLVDEDFRAVRVAAGD 245
Query: 79 MHTVCLTEDGKVYTWGC--NDEGALGREAEGDSEFIPQTV-NL--------PKKAVQISA 127
+ ++ G++ WG ++GALG E +F P + NL P+K V ++A
Sbjct: 246 SVSAAISSTGELRVWGSFRGNQGALGFSNEQQRQFQPAAILNLHNRAADQHPEKFVSVAA 305
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLK--------GEGIQKTPLKLESVSGIVKIAS 179
G++H V L G +Y G+ + G +G K G ++ L + +V + +
Sbjct: 306 GNNHLVILTTHGHIYTLGAGEE--GQLGRKVIERRKIHGTAPERIILGTRTRKAVV-VGA 362
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID--- 236
G +H + G++ G +GQ G + S G+ GEV + ++ I
Sbjct: 363 GNNHSFAVDQTGDVWAWGLNTKGQTGTGYRHS-------GID----GEVHVPKRVIGLSK 411
Query: 237 ---------DVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEV---QKSGNTCFFTPH 283
++ G ++T F++S G + A G +N QLG AD + + TP
Sbjct: 412 EELGGDTVVEIVGGDHHTLFLTSNGKVYACGRSNDGQLGLADDDPAFEDREFEDFLPTPA 471
Query: 284 LIK-SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
L+ ++ +++G H++LA+ + G +YA+G G LG V E V TP
Sbjct: 472 LVTFPDAEDPVAHISAGTHNNLAVTAGGALYAWGAQTQGELG---VGEDVEAKTP 523
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD--VMERKTF-------ALV---EDLDNVVEVVVGGMHT 81
T G V CG+ + GQLGL D E + F ALV + D V + G +
Sbjct: 433 TSNGKVYACGRSNDGQLGLADDDPAFEDREFEDFLPTPALVTFPDAEDPVAHISAGTHNN 492
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLE 137
+ +T G +Y WG +G LG + +++ P+ V + A+ + G H++ALL
Sbjct: 493 LAVTAGGALYAWGAQTQGELGVGEDVEAK-TPKVVVRKEGGSWAAIVAACGGQHTLALLR 551
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG +
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CQKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|451996623|gb|EMD89089.1| hypothetical protein COCHEDRAFT_1140917 [Cochliobolus
heterostrophus C5]
Length = 636
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 210/486 (43%), Gaps = 89/486 (18%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G+G +G+LG G DV + + ++ NVV + GGMH V LT+D K+ TW
Sbjct: 208 VFVFGEGGSGELGFGATKKAIDVKRPRYNEALTNM-NVVRIATGGMHVVALTKDNKILTW 266
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G ND GALGR+ T N K + A DS S + E G
Sbjct: 267 GVNDNGALGRD----------TSNANVKMRDVGADDSDSDSEDETG-------------- 302
Query: 154 MGLKGEGIQKTPLKLE---SVSGIVKIASGADHFVMLTSRGNLLTAGC--PEQGQLGRIT 208
GL E P+ E + V +A+G LT+ G + G +G LG
Sbjct: 303 -GLNDEEATPKPVPAEFFPEDTTFVDVAAGDSCSFALTTEGAVYGWGTFRKNEGILG--- 358
Query: 209 QRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGE 266
RG + P V L K + + G + ++ K + A+G +QLG
Sbjct: 359 -------FERG-NHTAPRPVYLDTVKKVTQIVCGTNHVYVLDKDRHVYAWGNGQQNQLGR 410
Query: 267 ADSEVQK----SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY-- 320
+E N F IK S ++ +ASG +H LA+ +G I+A+G ++Y
Sbjct: 411 RVTERNLHQALQPNRIGFHDTSIKKHS-QRIASIASGDYHGLAIAEDGHIWAWGANNYCE 469
Query: 321 ----GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
G G ++ S V +P I SL+ K++ S+A G + AI +G + WG +G Q
Sbjct: 470 TGYTGNAGAEDAS--VLQPKIIHSLEGKSVESLAAGAHHNLAITKDGQVLVWGRCDGAQT 527
Query: 377 G--------NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G ED +L + GK ++ V +PTP+P+L K + +
Sbjct: 528 GLPPSELDAETDEDKVLKNNGK-----------------AKIVVQPTPLPNL--KNVVTG 568
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
ACG S ID +G Y WG YQ G G +DDI P I+ + + GGQ+
Sbjct: 569 ACGPDHSIVIDKDGKAYSWGFSANYQTGQGTDDDIEVPTMIDNTAVRETKLTWAGCGGQY 628
Query: 489 SVILAK 494
S++ +K
Sbjct: 629 SILASK 634
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 228/500 (45%), Gaps = 79/500 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + T G + GQLG + ++ V+ L V + G +++ + DG V+ WG N
Sbjct: 337 GTLWTWGYNNRGQLG---NNSITQSLVPVQVLTGVASISAGYDYSLAVKSDGTVWAWGRN 393
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS----HSVALLEDGTVYAWGSFRDSHG 152
G G + DS +P V+ ISA S HS+AL DGTV+ WG +S G
Sbjct: 394 YYGQFGNNSTIDS-LVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWG--YNSTG 450
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G P++ ++G+V I++G++H + L S G G GQLG + +
Sbjct: 451 QLGNNSATQSLVPVQALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQS 510
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
L P +VP + + G Y++ + S G++ A+G N+ QLG
Sbjct: 511 ----------LVPVQVP-GLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLG------ 553
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL-GLKNVSE 330
+ T P I+ L+ T +++G +HS+AL S+G ++ +G ++Y ++ N+ +
Sbjct: 554 -NNSTTVSLVP--IQVLTGT--TSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQ 608
Query: 331 PVTEPTP------------IPSLQD-KTITSIACGNC-VSFAIDSEGVLYGWGMGNGYQL 376
V T +PS Q+ K+I + + G+ S A+ S+ ++ WG G L
Sbjct: 609 LVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVL 668
Query: 377 GNGKEDDIL------------------------NSEGKIYAFGRHDYGRLGLKNVSEPVT 412
GNG + +L S+G +A+G + YG LG + VT
Sbjct: 669 GNGTGEQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNST---VT 725
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P+ ++S+ G S A+ S+G ++ WG QLG+G L P+++ G
Sbjct: 726 SSIPVQVSGLTGVSSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGL 785
Query: 473 QLNNYTVLQVASGGQHSVIL 492
+ V+ +++G HS+++
Sbjct: 786 E----DVIAISAGDYHSMVI 801
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 214/495 (43%), Gaps = 69/495 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVE----DLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V G TGQLG T +LV L VV + G H++ L DG +
Sbjct: 439 GTVWGWGYNSTGQLG-----NNSATQSLVPVQALGLTGVVSISAGSNHSMALKSDGTAWI 493
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N +G LG + S +P V ISAG+ HS+AL DGTV+AWG R+S G
Sbjct: 494 WGGNSDGQLGNNSTAQS-LVPVQVPGLSGVSAISAGNYHSMALKSDGTVWAWG--RNSSG 550
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE------QGQLGR 206
+G + P+++ ++G +++G H + L S G + G E L +
Sbjct: 551 QLGNNSTTVSLVPIQV--LTGTTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQ 608
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKGSILAFGLNNY 261
+ + NA +S G VP + I + T Y+ + S ++ A+G
Sbjct: 609 LVPVKTAMNAY--ISDFNDGFVP-SSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGS 665
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
LG E G + ++ L+ + +++G+ HSLAL S+G +A+G + YG
Sbjct: 666 GVLGNGTGEQMLVG-------YPVRDLTGVE--QISAGEGHSLALRSDGTAWAWGDNAYG 716
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK- 380
LG + VT P+ ++S+ G S A+ S+G ++ WG QLG+G
Sbjct: 717 MLGNNST---VTSSIPVQVSGLTGVSSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGST 773
Query: 381 ------------EDDI-----------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
ED I + S+G ++A+GR+ G+LG N + P +
Sbjct: 774 TQRLVPVQVSGLEDVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLG-NNSTTGSLVPVQV 832
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
P L + I+ G S A+ S+G WG QL +G L P+++ +
Sbjct: 833 PGLTG--VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQV--SEPVGV 888
Query: 478 TVLQVASGGQHSVIL 492
L + HS+IL
Sbjct: 889 GALSMVVANSHSLIL 903
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 207/484 (42%), Gaps = 93/484 (19%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ +GQLG + + ++ L V G H++ L DG V+ WG N
Sbjct: 539 GTVWAWGRNSSGQLGNNSTTV---SLVPIQVLTGTTSVSAGTYHSMALKSDGAVWGWGNN 595
Query: 97 DEGALGREAEGD-----------------SEFIPQTVNLPKKAVQISAGDSH--SVALLE 137
+ + D F+P + + K++ S+G S+ S+AL
Sbjct: 596 EYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEI--KSIATSSGGSYGYSLALKS 653
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPL---KLESVSGIVKIASGADHFVMLTSRGNLL 194
D TV+AWG +G G+ G G + L + ++G+ +I++G H + L S G
Sbjct: 654 DKTVWAWG-----YGGSGVLGNGTGEQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAW 708
Query: 195 TAGCPEQGQLGRITQRSASRNAR----RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
G G LG + ++S + G+S ++ G + ++ + S
Sbjct: 709 AWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSSVKAGRL--------------HSMALKSD 754
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++ A+G N QLG+ + T P + L D +++G +HS+ + S+G
Sbjct: 755 GTVWAWGYNTEGQLGDGST-------TQRLVPVQVSGLED--VIAISAGDYHSMVIKSDG 805
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++A+GR+ G+LG N + P +P L + I+ G S A+ S+G WG
Sbjct: 806 TVWAWGRNSNGQLG-NNSTTGSLVPVQVPGLTG--VALISAGTNTSAAVKSDGTALAWGS 862
Query: 371 GNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGL 404
QL +G IL +G ++ GR+DYG +G
Sbjct: 863 NTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGN 922
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDI 463
++++ P+ +L + SI+ G S A+ S+G ++GWG NGY QLG+
Sbjct: 923 NSITD---SKVPVQTLGLAGVVSISAGLYHSMALKSDGTIWGWGY-NGYGQLGDNSTTSR 978
Query: 464 LEPM 467
L P+
Sbjct: 979 LAPV 982
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 168/368 (45%), Gaps = 28/368 (7%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V G G +G LG G + V DL V ++ G H++ L DG + WG N
Sbjct: 656 TVWAWGYGGSGVLGNGTGEQMLVGYP-VRDLTGVEQISAGEGHSLALRSDGTAWAWGDNA 714
Query: 98 EGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G LG + S IP V+ + AG HS+AL DGTV+AWG ++ G +G
Sbjct: 715 YGMLGNNSTVTSS-IPVQVSGLTGVSSVKAGRLHSMALKSDGTVWAWG--YNTEGQLGDG 771
Query: 158 GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+ P+++ + ++ I++G H +++ S G + G GQLG N+
Sbjct: 772 STTQRLVPVQVSGLEDVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGN--------NST 823
Query: 218 RGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
G L P +VP L + T + + S G+ LA+G N Y QL + S +Q+
Sbjct: 824 TGS--LVPVQVPGLTGVALISAGTNT-SAAVKSDGTALAWGSNTYGQLCDG-SNIQRLIP 879
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P + +LS + HSL L +G ++ GR+DYG +G ++++
Sbjct: 880 VQVSEPVGVGALS------MVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITD---SKV 930
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILNSEGKIYAFG 395
P+ +L + SI+ G S A+ S+G ++GWG NGY QLG+ L F
Sbjct: 931 PVQTLGLAGVVSISAGLYHSMALKSDGTIWGWGY-NGYGQLGDNSTTSRLAPVASKRWFF 989
Query: 396 RHDYGRLG 403
DY LG
Sbjct: 990 PDDYLNLG 997
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 213/473 (45%), Gaps = 76/473 (16%)
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
A +E + +VV G H + L DG V+ WG N G LG + + +P V+ +
Sbjct: 262 AKIEIQEKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLG-DGSTINRIVPVQVSGLTEV 320
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
ISA HS+AL DGT++ WG ++ G +G I ++ + ++ ++G+ I++G D
Sbjct: 321 SAISAAFGHSMALKSDGTLWTWG--YNNRGQLG--NNSITQSLVPVQVLTGVASISAGYD 376
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
+ + + S G + G GQ G + L P +V + +
Sbjct: 377 YSLAVKSDGTVWAWGRNYYGQFGN----------NSTIDSLVPIQVS-GLTGVTSISATS 425
Query: 243 YNTF-----ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
N + + S G++ +G N+ QLG + T P +++L ++
Sbjct: 426 SNNYSHSLALKSDGTVWGWGYNSTGQLGNNSA-------TQSLVP--VQALGLTGVVSIS 476
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G +HS+AL S+G + +G + G+LG + ++ + P +P L +++I+ GN S
Sbjct: 477 AGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLV-PVQVPGLSG--VSAISAGNYHSM 533
Query: 358 AIDSEGVLYGWGMGNGYQLGNGK----------------------EDDILNSEGKIYAFG 395
A+ S+G ++ WG + QLGN L S+G ++ +G
Sbjct: 534 ALKSDGTVWAWGRNSSGQLGNNSTTVSLVPIQVLTGTTSVSAGTYHSMALKSDGAVWGWG 593
Query: 396 RHDYGR-LGLKNVSEPVTEPTP------------IPSLQD-KTITSIACGNC-VSFAIDS 440
++Y + + N+ + V T +PS Q+ K+I + + G+ S A+ S
Sbjct: 594 NNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKS 653
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT-VLQVASGGQHSVIL 492
+ ++ WG G LGNG + +L G + + T V Q+++G HS+ L
Sbjct: 654 DKTVWAWGYGGSGVLGNGTGEQML-----VGYPVRDLTGVEQISAGEGHSLAL 701
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 97/270 (35%), Gaps = 69/270 (25%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +R V L++V+ + G H++ + DG V+ WG N
Sbjct: 755 GTVWAWGYNTEGQLGDG-STTQRLVPVQVSGLEDVIAISAGDYHSMVIKSDGTVWAWGRN 813
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF--------- 147
G LG + S +P V ISAG + S A+ DGT AWGS
Sbjct: 814 SNGQLGNNSTTGS-LVPVQVPGLTGVALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGS 872
Query: 148 -----------------------------------------RDSHGSMGLKGEGIQKTPL 166
R+ +G +G K P+
Sbjct: 873 NIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPV 932
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARRGM---- 220
+ ++G+V I++G H + L S G + G GQLG T R A ++R
Sbjct: 933 QTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAPVASKRWFFPDD 992
Query: 221 -----------SFLEPGEVPLKRKHIDDVF 239
E G + L +K I+D
Sbjct: 993 YLNLGGGYEAPGTFESGTIDLGKKTINDTI 1022
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 196/391 (50%), Gaps = 67/391 (17%)
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT---------PLKL-ESV 171
+Q++AG+ H++ L + G VY+ G + + S+ + + LKL E +
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYS-GGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKL 61
Query: 172 SG--IVKI--ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
G IVKI ++G +H + LT+ G + + G +GQLG Q S + P +
Sbjct: 62 RGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSIN----------SPKQ 111
Query: 228 V-PLKRKHIDDVFTGVYNTFISS--KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
V L RK + V Y+T S + I + G N+Y QLG + + + S P L
Sbjct: 112 VEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNS-------PTL 164
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
I++L+ K+ + GQ+HS+ + +G+I++FGR+D G+LG+ ++ P + +L+
Sbjct: 165 IEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS- 223
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
T IACG + AI++ G++Y++G++D G+LG+
Sbjct: 224 --TQIACGYYHTVAINN---------------------------GQLYSWGKNDSGQLGI 254
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
S PT + L+D+ I S+ACG + A+ G L+ +G + QLG+G ++
Sbjct: 255 GIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSC 314
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+P+ I+G L + V Q+A+G HS++LA P
Sbjct: 315 KPLLIQG--LIDKKVCQIAAGFYHSIVLANP 343
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 11 KQAENPSQKVFVTSEAVP---TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVED 67
KQ E S+K FVT+ T+ + +CG+ D GQLGLG ++ ++ + L+E
Sbjct: 110 KQVEALSRK-FVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLG-NLDDKNSPTLIEA 167
Query: 68 LD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQ 124
L+ +V + G H+V + DG+++++G ND G LG + +P+ V NL K+ Q
Sbjct: 168 LNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL--KSTQ 225
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESVSGIVKIASGA 181
I+ G H+VA + +G +Y+WG ++ G +G+ + I T ++ IV +A G
Sbjct: 226 IACGYYHTVA-INNGQLYSWG--KNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGC 282
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLG 205
H + L G L + G GQLG
Sbjct: 283 YHTLALGYAGQLFSFGRNSHGQLG 306
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 37 GVVLTCGQGDTGQLGL-GPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G + + G+ D+GQLG+ G D +L +++ N+ ++ G HTV + +G++Y+W
Sbjct: 190 GEIFSFGRNDSGQLGITGSD----GNISLPKEVKNLKSTQIACGYYHTVAIN-NGQLYSW 244
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ND G LG E +P V ++ V ++ G H++AL G ++++G R+SH
Sbjct: 245 GKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFG--RNSH 302
Query: 152 GSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTS 189
G +G PL ++ + + +IA+G H ++L +
Sbjct: 303 GQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLAN 342
>gi|449328953|gb|AGE95228.1| regulator of chromosome condensation [Encephalitozoon cuniculi]
Length = 440
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 171/354 (48%), Gaps = 38/354 (10%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V G QLGLG D + D ++ +V G +HT+ L DG +Y+WGCN
Sbjct: 84 VFVFGSNAISQLGLGEDAESTHVPTRLSFFDKMSLTKVRCGSLHTLVLDSDGMLYSWGCN 143
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
DEGALGR+ + E PQ V L +K V + G S SVAL G VY WG+FR ++G+ GL
Sbjct: 144 DEGALGRDGD---ESTPQRVCLDEKIVDMDCGASISVALTSRGHVYVWGTFRSTNGTFGL 200
Query: 157 K-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G+ I P+K+ + I +++G L S+ ++ T G E G+LGR R++ RN
Sbjct: 201 TPGKKISFEPVKV-PLKSITALSAGQGFVAALDSKDSIFTFGSNEFGELGR---RTSERN 256
Query: 216 ARRGMSFLEPGEVPLKRKHIDDV-FTGV-----YNTFISSKGSILAFGLNNYSQLG--EA 267
R L P V RK + + F + + +++ G +G N Y QLG +A
Sbjct: 257 KLRA---LIPDAVTTPRKRLRNYRFRSISCGLNHIIALNTDGEAYCWGSNLYGQLGHDKA 313
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+S +K + +A G++HSL + +G ++ GR+ G+LG+++
Sbjct: 314 ESTFKKY------------KVPLDGIRQVAGGENHSLFVTIDGTLHGCGRNKEGQLGIQS 361
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
V E V P + +T+ S N + LY WG G LG+ +E
Sbjct: 362 V-EAVRTPMKLSIEHVETVRSYNSFNICRVGNE----LYSWGTGFNGALGHEEE 410
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 155/392 (39%), Gaps = 71/392 (18%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
+V+ +GS S +G E T L + K+ G+ H ++L S G L + GC
Sbjct: 83 SVFVFGSNAISQLGLGEDAESTHVPTRLSFFDKMSLTKVRCGSLHTLVLDSDGMLYSWGC 142
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
++G LGR S P V L K +D + ++S+G + +G
Sbjct: 143 NDEGALGRDGDEST------------PQRVCLDEKIVDMDCGASISVALTSRGHVYVWG- 189
Query: 259 NNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD-----KKFTMLASGQHHSLALNSEGKI 312
+S N F TP S K T L++GQ AL+S+ I
Sbjct: 190 ------------TFRSTNGTFGLTPGKKISFEPVKVPLKSITALSAGQGFVAALDSKDSI 237
Query: 313 YAFGRHDYGRLGLKNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ FG +++G LG + P TP L++ SI+CG A++++G
Sbjct: 238 FTFGSNEFGELGRRTSERNKLRALIPDAVTTPRKRLRNYRFRSISCGLNHIIALNTDGEA 297
Query: 366 YGWGMGNGYQLGNGKEDDILNS-----------------------EGKIYAFGRHDYGRL 402
Y WG QLG+ K + +G ++ GR+ G+L
Sbjct: 298 YCWGSNLYGQLGHDKAESTFKKYKVPLDGIRQVAGGENHSLFVTIDGTLHGCGRNKEGQL 357
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G+++V E V P + +T+ S N + LY WG G LG+ +E+
Sbjct: 358 GIQSV-EAVRTPMKLSIEHVETVRSYNSFNICRVGNE----LYSWGTGFNGALGH-EEET 411
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
IL P KI + V+ G SV++ +
Sbjct: 412 ILIPKKIP---FDFPEVIDFDVGNDFSVVVTR 440
>gi|156063594|ref|XP_001597719.1| hypothetical protein SS1G_01915 [Sclerotinia sclerotiorum 1980]
gi|154697249|gb|EDN96987.1| hypothetical protein SS1G_01915 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 492
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 161/353 (45%), Gaps = 74/353 (20%)
Query: 90 VYTWGCNDEGALGREAEGDS-----------------------EFIPQTVNLP----KKA 122
+ TWG ND G+LGR+ + E P ++ +K
Sbjct: 113 ILTWGVNDGGSLGRDTSANEAPAKDIDADSDSEDEDDIVLNPIESTPTAISTDFLDGRKV 172
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-----------------IQKTP 165
+Q+ A DS S+ L +DG VY WGSF + G++G EG IQ P
Sbjct: 173 IQVLASDSVSLVLTDDGYVYGWGSFTGNDGTIGFTTEGATKASTEHDGDLKKKLKIQAEP 232
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
+ + + I +A G++H + L ++G L T G +Q QLGR R S L P
Sbjct: 233 VLIPGLKNIKSLARGSNHVLALDNKGTLFTWGAWQQYQLGRRVSE------RLKFSALTP 286
Query: 226 GEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
+ LKR + G Y++F I+ K +LA+GLNN+ Q G AD + + P +
Sbjct: 287 SPI-LKR--CKAIAAGTYHSFAINQKDQVLAWGLNNFGQTGIADKAGED--DALIRNPTV 341
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-------------NVSEP 331
+KSL K L G HHS+A + ++ +GR DYG++G+ + +P
Sbjct: 342 VKSLKGYKIAQLKGGLHHSIACTEDKEVLVWGRCDYGQMGVDLSTIDKKSIITSASTGKP 401
Query: 332 --VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ +PT +P ++ + S NC++ ID +G + WG G Y+ G G ++
Sbjct: 402 AILLKPTVVPDIKGNFV-SAGIDNCIT--IDDDGKAWSWGYGENYRTGLGSDE 451
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 52/256 (20%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P LI L K LA G +H LAL+++G ++ +G +LG + VSE + PS
Sbjct: 232 PVLIPGL--KNIKSLARGSNHVLALDNKGTLFTWGAWQQYQLG-RRVSERLKFSALTPSP 288
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKEDDIL------------- 385
K +IA G SFAI+ + + WG+ N Q G EDD L
Sbjct: 289 ILKRCKAIAAGTYHSFAINQKDQVLAWGLNNFGQTGIADKAGEDDALIRNPTVVKSLKGY 348
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLK-------------NVSEP--VTEPT 415
+ ++ +GR DYG++G+ + +P + +PT
Sbjct: 349 KIAQLKGGLHHSIACTEDKEVLVWGRCDYGQMGVDLSTIDKKSIITSASTGKPAILLKPT 408
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
+P ++ + S NC++ ID +G + WG G Y+ G G ++ P IE +
Sbjct: 409 VVPDIKGNFV-SAGIDNCIT--IDDDGKAWSWGYGENYRTGLGSDETAWTPTVIENSAVK 465
Query: 476 NYTVLQVASGGQHSVI 491
+ GGQ S+I
Sbjct: 466 GKKMTFAGCGGQFSII 481
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 114/312 (36%), Gaps = 55/312 (17%)
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
TSR +LT G + G LGR T + + E + I+ T + F+
Sbjct: 108 TSRQPILTWGVNDGGSLGRDTSANEAPAKDIDADSDSEDEDDIVLNPIESTPTAISTDFL 167
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ I ++ S + D V G+ FT G ++
Sbjct: 168 DGRKVIQVLASDSVSLVLTDDGYVYGWGS----------------FT----GNDGTIGFT 207
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+EG A HD LK + EP IP L K I S+A G+ A+D++G L+
Sbjct: 208 TEGATKASTEHDGD---LKKKLKIQAEPVLIPGL--KNIKSLARGSNHVLALDNKGTLFT 262
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG YQLG + VSE + PS K +
Sbjct: 263 WGAWQQYQLG---------------------------RRVSERLKFSALTPSPILKRCKA 295
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKEDDILEPMKIEGKQLNNYTVLQVAS 484
IA G SFAI+ + + WG+ N Q G EDD L K L Y + Q+
Sbjct: 296 IAAGTYHSFAINQKDQVLAWGLNNFGQTGIADKAGEDDALIRNPTVVKSLKGYKIAQLKG 355
Query: 485 GGQHSVILAKPK 496
G HS+ + K
Sbjct: 356 GLHHSIACTEDK 367
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 28/263 (10%)
Query: 64 LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKA 122
L+ L N+ + G H + L G ++TWG + LGR +F T + + K+
Sbjct: 234 LIPGLKNIKSLARGSNHVLALDNKGTLFTWGAWQQYQLGRRVSERLKFSALTPSPILKRC 293
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-----KGEGIQKTPLKLESVSG--IV 175
I+AG HS A+ + V AWG ++ G G+ + + + + P ++S+ G I
Sbjct: 294 KAIAAGTYHSFAINQKDQVLAWG--LNNFGQTGIADKAGEDDALIRNPTVVKSLKGYKIA 351
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG----RITQRSASRNARRGMS--FLEPGEVP 229
++ G H + T +L G + GQ+G I ++S +A G L+P VP
Sbjct: 352 QLKGGLHHSIACTEDKEVLVWGRCDYGQMGVDLSTIDKKSIITSASTGKPAILLKPTVVP 411
Query: 230 LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-- 286
+ + V G+ N I G ++G + G E +TP +I+
Sbjct: 412 DIKGNF--VSAGIDNCITIDDDGKAWSWGYGENYRTGLGSDETA-------WTPTVIENS 462
Query: 287 SLSDKKFTMLASGQHHSLALNSE 309
++ KK T G S+ E
Sbjct: 463 AVKGKKMTFAGCGGQFSIIAGPE 485
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 48/322 (14%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWG--CNDEGALGREAEGDSEFIPQTVNLPKKAVQISA- 127
V++V+ ++ LT+DG VY WG ++G +G EG ++ + KK ++I A
Sbjct: 172 VIQVLASDSVSLVLTDDGYVYGWGSFTGNDGTIGFTTEGATKASTEHDGDLKKKLKIQAE 231
Query: 128 ---------------GDSHSVALLEDGTVYAWGSFRD----SHGSMGLKGEGIQKTPLKL 168
G +H +AL GT++ WG+++ S LK + +P+
Sbjct: 232 PVLIPGLKNIKSLARGSNHVLALDNKGTLFTWGAWQQYQLGRRVSERLKFSALTPSPI-- 289
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR-RGMSFLEPGE 227
+ IA+G H + + +L G GQ G I ++ +A R + ++
Sbjct: 290 --LKRCKAIAAGTYHSFAINQKDQVLAWGLNNFGQTG-IADKAGEDDALIRNPTVVK--- 343
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQK-----SGNT---- 277
LK I + G++++ ++ +L +G +Y Q+G S + K S +T
Sbjct: 344 -SLKGYKIAQLKGGLHHSIACTEDKEVLVWGRCDYGQMGVDLSTIDKKSIITSASTGKPA 402
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
P ++ D K +++G + + ++ +GK +++G + R GL + E PT
Sbjct: 403 ILLKPTVV---PDIKGNFVSAGIDNCITIDDDGKAWSWGYGENYRTGLGS-DETAWTPTV 458
Query: 338 I--PSLQDKTITSIACGNCVSF 357
I +++ K +T CG S
Sbjct: 459 IENSAVKGKKMTFAGCGGQFSI 480
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG D+ G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDTDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S++ IV+IA G H + L+ + + G + GQLG +
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 LKRQSSPQLIKSLL---GIPFTQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L+ QLG +E P IKSL+D + +A G +HSLAL+ +++++G+
Sbjct: 110 LDTDGQLGLPGTE------EYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL + + P I SL T +A G SF + G ++GWG QLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQI+ G HS+AL + V++WG ++ HG
Sbjct: 112 TDGQLG--LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E Q +P ++S+ GI ++A+G H +LT G + G + GQLG
Sbjct: 168 QLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRFVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 279 TSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG ++ + + L++ L + +V GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D F+P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I IAC
Sbjct: 99 --------------LNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L QVA+GG HS
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLI--KSLLGIPFTQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L + ++Q+A G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNI--KSLTDIQIVQIACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|405121061|gb|AFR95830.1| pim1 protein + RNA transporter 2 [Cryptococcus neoformans var.
grubii H99]
Length = 590
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 168/348 (48%), Gaps = 63/348 (18%)
Query: 27 VPTLKC-KTGGGVVLTCGQGDTGQLGLGPDVMER----KTFALVEDL------------- 68
+P++ KT + G GD GQ GLGPD ++ K + E+
Sbjct: 77 IPSIPATKTPHNSLFVWGTGDQGQFGLGPDNLDEIGRPKLHSWFEEQIEEGNLSRDGKPG 136
Query: 69 -DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR------EAEGDSEFIPQT--VNLP 119
+ V GGMHT+ + E G+V +WG ND ALGR + + E IP + P
Sbjct: 137 SGGLEYVYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMIPNEDLESYP 196
Query: 120 K----------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTP 165
+AVQ++AGDS SVA+ + G + AWGSFR + G +G G Q TP
Sbjct: 197 YVVETLEQEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGHPKFQYTP 256
Query: 166 LKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
+ L ++S I +++ GADH + LT+ G++ G E+ QLGR N L
Sbjct: 257 ISLPALSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRING------L 310
Query: 224 EPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
EP + L ++I V G+Y++F + +KG + +GLN + Q G A+ + P
Sbjct: 311 EPERLGL--RNIVHVAAGIYHSFAVDNKGIVYGWGLNTFHQTGVAEHQ------DMIIAP 362
Query: 283 HLIKSL-SDK----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
++ +L DK K ++ G+HHSL L G+++ GR D LG+
Sbjct: 363 TVVDALHPDKHNGSKVIKVSGGEHHSLFLFENGEVWGCGRCDANELGI 410
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 63/280 (22%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP--------HLIKSLSDKK 292
G++ I G + ++G+N+ + LG ++V N P +++++L +
Sbjct: 147 GMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMIPNEDLESYPYVVETLEQEG 206
Query: 293 F--TMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVS-EPVTEPTPI--PSLQDKT 345
F +A+G S+A++ +G++ A+G R + G LG V P + TPI P+L
Sbjct: 207 FRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISLPALSKVQ 266
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---------NGKEDDILNSEGKIYAFGR 396
IT ++CG A+ + G +Y WG G QLG NG E +
Sbjct: 267 ITQVSCGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRINGLEPE------------- 313
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
RLGL+N I +A G SFA+D++G++YGWG+ +Q G
Sbjct: 314 ----RLGLRN------------------IVHVAAGIYHSFAVDNKGIVYGWGLNTFHQTG 351
Query: 457 NGKEDD-ILEPMKIEG---KQLNNYTVLQVASGGQHSVIL 492
+ D I+ P ++ + N V++V+ G HS+ L
Sbjct: 352 VAEHQDMIIAPTVVDALHPDKHNGSKVIKVSGGEHHSLFL 391
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGL--------KNVSEPV------TEPTPIPSLQDK 344
G H+LA++ G++ ++G +D LG KN E + + P + +L+ +
Sbjct: 146 GGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMIPNEDLESYPYVVETLEQE 205
Query: 345 TITSI--ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
++ A G+ +S AI +G L WG +F R + G L
Sbjct: 206 GFRAVQVAAGDSISVAISDKGELRAWG-----------------------SF-RSNEGIL 241
Query: 403 GLKNVS-EPVTEPTPI--PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G V P + TPI P+L IT ++CG A+ + G +Y WG G QLG
Sbjct: 242 GFDGVPGHPKFQYTPISLPALSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQLGRRI 301
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+E ++L ++ VA+G HS +
Sbjct: 302 ISRRRI-NGLEPERLGLRNIVHVAAGIYHSFAV 333
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 56 VMERKTFALVEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQ 114
V E + + DN VV++ G H + +++ G +Y WG + LG +E +E +P
Sbjct: 497 VPEFPAYKNSKPADNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGLGSEEVAE-VPS 555
Query: 115 TVN----LPKKAVQISAGDSHSVAL 135
V P ++V +SAG H VAL
Sbjct: 556 LVRSKLLRPYRSVAVSAGGQHCVAL 580
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPF----MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG D+ G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDTDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S++ IV+IA G H + L+ + + G + GQLG +
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 LKRQSSPQLIKSLL---GIPFTQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L+ QLG +E P IKSL+D + +A G +HSLAL+ +++++G+
Sbjct: 110 LDTDGQLGLPGTE------EYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL + + P I SL T +A G SF + G ++GWG QLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQI+ G HS+AL + V++WG ++ HG
Sbjct: 112 TDGQLG--LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E Q +P ++S+ GI ++A+G H +LT G + G + GQLG
Sbjct: 168 QLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRFVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 279 TSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG ++ + + L++ L + +V GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D F+P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I IAC
Sbjct: 99 --------------LNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L QVA+GG HS
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLI--KSLLGIPFTQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L + ++Q+A G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNI--KSLTDIQIVQIACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASG-QHHSLALNSEGKIYAFGRHDYGRLG 324
+ P + L T +A G QH S + S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG D+ G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDTDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S++ IV+IA G H + L+ + + G + GQLG +
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 LKRQSSPQLIKSLL---GIPFTQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L+ QLG +E P IKSL+D + +A G +HSLAL+ +++++G+
Sbjct: 110 LDTDGQLGLPGTE------EYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL + + P I SL T +A G SF + G ++GWG QLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQI+ G HS+AL + V++WG ++ HG
Sbjct: 112 TDGQLG--LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E Q +P ++S+ GI ++A+G H +LT G + G + GQLG
Sbjct: 168 QLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRFVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 279 TSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG ++ + + L++ L + +V GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D F+P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I IAC
Sbjct: 99 --------------LNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L QVA+GG HS
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLI--KSLLGIPFTQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L + ++Q+A G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNI--KSLTDIQIVQIACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 190/401 (47%), Gaps = 53/401 (13%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+ D GQLGLG + M + ++ +V+ + G HTV LT KVY+ G N+ G LG
Sbjct: 5 GKNDYGQLGLGSENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLG 64
Query: 103 REAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG 160
++ S+ P V ++ ++AGD S+A+ E G ++ WG R +G + K +
Sbjct: 65 QQ---KSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG--RSLNGELMCKQDS 119
Query: 161 IQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
+ + P L+ + +V++A GA H + LT G +L+ G QGQLG
Sbjct: 120 LHE-PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGL---------GSS 169
Query: 219 GMSFLEPGEVP-LKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ FLEP + L I + G Y++ +S G++ +G NN+ QLG +S+ +S
Sbjct: 170 EIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQS-- 227
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
+P L+K+L ++ +A G+ HS+ G ++++G G+LG N VT+P
Sbjct: 228 ----SPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLG-HNSMANVTQPK 282
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
I L T+ I CG + ++ + L G+G+ + QLG +
Sbjct: 283 KIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTS------------- 329
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
RL P+T PI D+ ++ IA G SF+
Sbjct: 330 ---ARL-------PIT--IPISLTDDRQLSCIAAGGDQSFS 358
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 159/380 (41%), Gaps = 55/380 (14%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
+Y WG ++ +G +GL E + P +++ ++ IASG H V LTS + + G
Sbjct: 1 MYGWG--KNDYGQLGLGSENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFG 257
E GQLG+ Q+S R P V + I V G ++ I+ G + +G
Sbjct: 59 EFGQLGQ--QKSQCR----------PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG 106
Query: 258 LN-NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+ N + + DS P L+ + +A G H +AL EG I ++G
Sbjct: 107 RSLNGELMCKQDS---------LHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWG 157
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ G+LGL + EPT I SL I+ I G S + G L+ WG N QL
Sbjct: 158 SNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQL 217
Query: 377 GNGKEDDILNS---------------------------EGKIYAFGRHDYGRLGLKNVSE 409
G+G D +S G ++++G G+LG N
Sbjct: 218 GHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLG-HNSMA 276
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
VT+P I L T+ I CG + ++ + L G+G+ + QLG + P+ I
Sbjct: 277 NVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLPITI 336
Query: 470 EGKQLNNYTVLQVASGGQHS 489
++ + +A+GG S
Sbjct: 337 PISLTDDRQLSCIAAGGDQS 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G +L+ G GQLGLG +E ++ L+ + ++ G H+ L+ G ++
Sbjct: 148 TEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLF 207
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
TWG N+ G LG + P+ V + + V ++ G+ HSV +G V++WG
Sbjct: 208 TWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWG--HG 265
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G P K+ + G + +I G H + LT + LL G QLG
Sbjct: 266 GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTH 325
Query: 208 TQRSA 212
SA
Sbjct: 326 NDTSA 330
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 34/183 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+Y +G++DYG+LGL + + ++ P+PI + ++++ SIA G
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPSPIDA--NQSVISIASG------------------- 39
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ L S K+Y+ G +++G+LG + + P+ + + I +A G
Sbjct: 40 -------LRHTVYLTSTRKVYSCGSNEFGQLGQQ---KSQCRPSLVTGFGAEEIFHVAAG 89
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S AI G+L+GWG +L K+D + EP ++ ++ +++V+QVA G QH +
Sbjct: 90 DFFSIAIAESGLLFGWGRSLNGELM-CKQDSLHEPKLLD--KIMHWSVVQVACGAQHCIA 146
Query: 492 LAK 494
L +
Sbjct: 147 LTE 149
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPF----MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G C S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYCH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 235/525 (44%), Gaps = 100/525 (19%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G+ G+LGLG D +R V + V G HTV + +G ++ WG +
Sbjct: 142 GTLWAWGRNGYGRLGLG-DTDDRDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRS 200
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
LG + D P+ V + + +SAG SH+VA+ DGT++AWG R++ G +GL
Sbjct: 201 GRIGLGDSGDRDE---PEQVGVDNDWIALSAGGSHTVAVKADGTLWAWG--RNNAGQLGL 255
Query: 157 KGEGIQKTPLKLESVSGIV-KIASGADHFVMLTSRGNLLTAGCPEQGQL----------- 204
TP ++ + + KI++G H + + + G+L G E GQL
Sbjct: 256 GDTNHHYTPTQVGTDTDWAKKISAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAP 315
Query: 205 ---GRITQRSASRNARR------------GMSFLEPGEVPL----KRKHIDDVFT----- 240
G T +A RR + + G++ L R + V
Sbjct: 316 EQVGSNTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGADTDWD 375
Query: 241 -----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
G ++ + + G+++ +GLN+ QLG D+ + + P I S
Sbjct: 376 LVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVSRDA-------PVPIAS-----GIA 423
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
L +G++H++A+N +G + A+G ++YG+LGL + VT PS Q T ++ A N
Sbjct: 424 LVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYIVT-----PS-QTVTGSAWAAVNGG 477
Query: 356 SF----AIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNS 387
SF + +G L+ WG N QLG G DD + +
Sbjct: 478 SFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSHTDWAAVNAASYHTLAVKN 537
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+G ++A+GR+ G+LGL + ++ TP D +++ G + A+ +G L+ W
Sbjct: 538 DGTLWAWGRNSSGQLGLSDTND---RHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWAW 594
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G + QLG G D L P ++ G+ +N+ L V++G H+V +
Sbjct: 595 GWNHYGQLGLGDTSDRLSPEQVGGE--SNW--LAVSTGLHHTVAV 635
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 196/421 (46%), Gaps = 57/421 (13%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV 133
+ G HTV + DG ++ WG N G LG + D +P+ V +SAG H+V
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGL-GDTDDRDVPEQVGTDSDWTAVSAGRDHTV 186
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
A+ +GT++AWG G +GL G + P ++ + + +++G H V + + G L
Sbjct: 187 AVKANGTLWAWG----RSGRIGLGDSGDRDEPEQVGVDNDWIALSAGGSHTVAVKADGTL 242
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
G GQLG + G ++ R+H + + + GS+
Sbjct: 243 WAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRH---------SLAVKADGSL 293
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
A+G N Y QLG D++ + + P + S +D + +++G+ HSLA+ ++G ++
Sbjct: 294 WAWGDNEYGQLGLGDTDERHA-------PEQVGSNTD--WAAISAGRRHSLAVKADGSLW 344
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
++G +D G+LGL + ++ P + + D + ++ G S A+ ++G L WG+ +
Sbjct: 345 SWGYNDSGQLGLGDTADR-NAPEQVGADTDWDL--VSAGGEHSLAVKADGTLMVWGLNHL 401
Query: 374 YQLG--------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
QLG G+ + +N +G + A+G ++YG+LGL + VT
Sbjct: 402 GQLGLGDTVSRDAPVPIASGIALVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYIVT 461
Query: 413 EPTPIPSLQDKTITSIACGNCVSF----AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
PS Q T ++ A N SF + +G L+ WG N QLG G DD P +
Sbjct: 462 -----PS-QTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQ 515
Query: 469 I 469
+
Sbjct: 516 V 516
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 197/447 (44%), Gaps = 61/447 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G ++ G GQLGLG V + + +V G HTV + DG + WG N
Sbjct: 391 GTLMVWGLNHLGQLGLGDTVSRDAPVPIASG----IALVAGRNHTVAVNPDGTLRAWGDN 446
Query: 97 DEGALGREAEGDSEFI---PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
+ G LG G +I QTV A +HS+ L +DGT++AWG R+++G
Sbjct: 447 EYGQLGL---GVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWG--RNNYGQ 501
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+GL + TP ++ S + + + + H + + + G L G GQLG ++ +
Sbjct: 502 LGLGDTDDRATPEQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLG-LSDTNDR 560
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
R S + V + + H + + G++ A+G N+Y QLG D+ +
Sbjct: 561 HTPERVGSDTDWATVSVGQSHT---------SAVKPDGTLWAWGWNHYGQLGLGDTSDR- 610
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
+P + S+ + +++G HH++A+ ++G ++A+G + G+LGL + S+
Sbjct: 611 ------LSPEQVGGESN--WLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSD--- 659
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
P+ D +++ + A+ ++G L+ WG N QLG G D+
Sbjct: 660 RHAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVGND 719
Query: 384 --------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ ++A+GR+ G+LGL + P+ + ++++
Sbjct: 720 ADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDN---RDAPVQVGNETDWSTVS 776
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G + A S+G L WG+ QLG
Sbjct: 777 GGGYHTLATMSDGTLRAWGLNTSGQLG 803
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 216/520 (41%), Gaps = 92/520 (17%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G + GQLGLG D ER V + + G H++ + DG +++WG N
Sbjct: 291 GSLWAWGDNEYGQLGLG-DTDERHAPEQVGSNTDWAAISAGRRHSLAVKADGSLWSWGYN 349
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG D P+ V +SAG HS+A+ DGT+ WG + G +GL
Sbjct: 350 DSGQLGLGDTADRN-APEQVGADTDWDLVSAGGEHSLAVKADGTLMVWG--LNHLGQLGL 406
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR------ 210
+ P+ + SGI +A G +H V + G L G E GQLG R
Sbjct: 407 GDTVSRDAPVPI--ASGIALVA-GRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYIVTPS 463
Query: 211 ----SASRNARRGMSF----------------------LEPGEVPLKR------KHID-- 236
++ A G SF L G+ + H D
Sbjct: 464 QTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSHTDWA 523
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
V Y+T + + G++ A+G N+ QLG +D+ + TP + S D +
Sbjct: 524 AVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDR-------HTPERVGS--DTDWAT 574
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++ GQ H+ A+ +G ++A+G + YG+LGL + S+ + +P + +++ G
Sbjct: 575 VSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRL---SPEQVGGESNWLAVSTGLHH 631
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKI 391
+ A+ ++G L+ WG QLG G D + ++G +
Sbjct: 632 TVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGSDTDWAAVSASGYRTLAVKADGTL 691
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+A+G ++ G+LGL + TP D +++ G + A + L+ WG +
Sbjct: 692 WAWGENNNGQLGLGDTDN---RNTPAQVGNDADWAAVSTGLFHTLAFKEDDTLWAWGRNH 748
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
QLG G D+ P+ Q+ N T SGG + +
Sbjct: 749 DGQLGLGDTDNRDAPV-----QVGNETDWSTVSGGGYHTL 783
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 55/343 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G+ + GQLGLG D +R T V + V HT+ + DG ++ WG N
Sbjct: 489 GTLWAWGRNNYGQLGLG-DTDDRATPEQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRN 547
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D P+ V +S G SH+ A+ DGT++AWG + +G +GL
Sbjct: 548 SSGQLGLSDTND-RHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWAWG--WNHYGQLGL 604
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSA-- 212
+ +P ++ S + +++G H V + + G L G +GQLG + R A
Sbjct: 605 GDTSDRLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPV 664
Query: 213 --------------------------------SRNARRGMSFLEPGEVPLKRKHIDD--- 237
+ N + G+ + P + + D
Sbjct: 665 QVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVGNDADWAA 724
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V TG+++T ++ A+G N+ QLG D++ + + P + + +D ++ +
Sbjct: 725 VSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDA-------PVQVGNETD--WSTV 775
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
+ G +H+LA S+G + A+G + G+LG + + +P +P
Sbjct: 776 SGGGYHTLATMSDGTLRAWGLNTSGQLGQRTMW--FDQPQEVP 816
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 31/222 (13%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
F +LA+G H++A+ ++G ++A+GR+ YGRLGL + + P D T+++ G
Sbjct: 125 FPVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDD---RDVPEQVGTDSDWTAVSAG 181
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------------ILNSEGK 390
+ A+ + G L+ WG LG+ + D + ++G
Sbjct: 182 RDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDWIALSAGGSHTVAVKADGT 241
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
++A+GR++ G+LGL + + T PT + + D I+ G S A+ ++G L+ WG
Sbjct: 242 LWAWGRNNAGQLGLGDTNHHYT-PTQVGTDTDWA-KKISAGRRHSLAVKADGSLWAWGDN 299
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG G D+ P ++ +N +++G +HS+ +
Sbjct: 300 EYGQLGLGDTDERHAPEQVG----SNTDWAAISAGRRHSLAV 337
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 16/219 (7%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
+Q S + V++ T+ KT G + G GQLGLG + D D
Sbjct: 614 EQVGGESNWLAVSTGLHHTVAVKTDG-TLWAWGWNVRGQLGLGHTSDRHAPVQVGSDTD- 671
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
V G T+ + DG ++ WG N+ G LG + D+ P V +S G
Sbjct: 672 WAAVSASGYRTLAVKADGTLWAWGENNNGQLGL-GDTDNRNTPAQVGNDADWAAVSTGLF 730
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
H++A ED T++AWG R+ G +GL + P+++ + + ++ G H + S
Sbjct: 731 HTLAFKEDDTLWAWG--RNHDGQLGLGDTDNRDAPVQVGNETDWSTVSGGGYHTLATMSD 788
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
G L G GQLG +R M F +P EVP
Sbjct: 789 GTLRAWGLNTSGQLG-----------QRTMWFDQPQEVP 816
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPF----MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 188/423 (44%), Gaps = 67/423 (15%)
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK------KAVQISAGDSHS 132
+ ++ + DGK Y WG N G LG +A +S P V P VQ+SAG HS
Sbjct: 570 VFSLAVGSDGKAYAWGDNTYGQLG-DATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHS 628
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---------IVKIASGADH 183
+AL DG VYAWGS + HG +G + P+++ + +++++G +H
Sbjct: 629 LALGSDGYVYAWGS--NQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEH 686
Query: 184 FVMLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+ L S G + G + G+LG T S R S +P K V G
Sbjct: 687 SLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPS----KGLKAVQVSAG 742
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-------KF 293
+++ + S G A+GLNNY QLG + S N+ F P ++ + K
Sbjct: 743 WHHSLAVGSDGYTYAWGLNNYGQLGNS------SKNSSSF-PVRVRDFASPNDANKGLKA 795
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-----VTEPT-PIPSLQDKTIT 347
+++G HSLA+ S+G YA+G ++YG+LG N + V +PT P + + T
Sbjct: 796 VQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKAT 855
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+I G S A+ + G Y WG QLG+G + +V
Sbjct: 856 AINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSN---------------------SSV 894
Query: 408 SEPVTEPT-PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
PV +PT P + + T + G+ S A+ S G Y WG + QLG+G DD P
Sbjct: 895 PVPVRDPTSPADASKGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVP 954
Query: 467 MKI 469
+ +
Sbjct: 955 VSV 957
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 170/379 (44%), Gaps = 39/379 (10%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G G GQLG P+++ RK + D V+V G H++ L DG
Sbjct: 579 GKAYAWGDNTYGQLGDATTNSRSTPNIV-RKPTGVPTDF-TYVQVSAGKWHSLALGSDGY 636
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK---------KAVQISAGDSHSVALLEDGT 140
VY WG N G LG + +S +P V P KA+Q+SAGD HS+AL +G
Sbjct: 637 VYAWGSNQHGQLGNNTKTNSS-VPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGY 695
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---------IVKIASGADHFVMLTSRG 191
VYAWG + +G +G P+++ + V++++G H + + S G
Sbjct: 696 VYAWG--WNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVGSDG 753
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
G GQLG ++ S+S R F P + K + ++ + S G
Sbjct: 754 YTYAWGLNNYGQLGNSSKNSSSFPVRV-RDFASPNDANKGLKAVQVSAGYSHSLAVGSDG 812
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEG 310
A+GLNNY QLG +++ V + P K S K T + +G HSLA+ + G
Sbjct: 813 YTYAWGLNNYGQLGNSNT-VDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVGNNG 871
Query: 311 KIYAFGRHDYGRLGLKNVSE-----PVTEPT-PIPSLQDKTITSIACGNCVSFAIDSEGV 364
YA+G + Y +LG S PV +PT P + + T + G+ S A+ S G
Sbjct: 872 YAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFSVGDHHSLAVGSNGY 931
Query: 365 LYGWGMGNGYQLGNGKEDD 383
Y WG + QLG+G DD
Sbjct: 932 AYAWGENSYGQLGDGTTDD 950
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 65/322 (20%)
Query: 199 PEQG-QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
P++G QLG T ++ G+ F + G +T V++ + S G A+G
Sbjct: 534 PDKGSQLGHETTTITPPDSTSGIRFNQVGGA--------KYYTYVFSLAVGSDGKAYAWG 585
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS----DKKFTMLASGQHHSLALNSEGKIY 313
N Y QLG+A + + TP++++ + D + +++G+ HSLAL S+G +Y
Sbjct: 586 DNTYGQLGDATTNSRS-------TPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVY 638
Query: 314 AFGRHDYGRLG---LKNVSEPVTEPTPI-PSLQDKTITSI--ACGNCVSFAIDSEGVLYG 367
A+G + +G+LG N S PV P P+ +K + +I + G+ S A+DS G +Y
Sbjct: 639 AWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGYVYA 698
Query: 368 WGMGNGYQLGNGKEDD---------------------------------ILNSEGKIYAF 394
WG + +LGN D + S+G YA+
Sbjct: 699 WGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYAW 758
Query: 395 GRHDYGRLG--LKNVSE-PV-TEPTPIPSLQDKTITSI--ACGNCVSFAIDSEGVLYGWG 448
G ++YG+LG KN S PV P+ +K + ++ + G S A+ S+G Y WG
Sbjct: 759 GLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYTYAWG 818
Query: 449 MGNGYQLGNGKEDDILEPMKIE 470
+ N QLGN D P+++
Sbjct: 819 LNNYGQLGNSNTVDSTVPVRVR 840
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 192/401 (47%), Gaps = 53/401 (13%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+ D GQLGLG + M + ++ +V+ + G HTV LT KVY+ G N+ G LG
Sbjct: 5 GKNDYGQLGLGSENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLG 64
Query: 103 REAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG 160
++ S+ P V ++ ++AGD S+A+ E G ++ WG R +G + K +
Sbjct: 65 QQK---SQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG--RSLNGELMCKQDS 119
Query: 161 IQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
+ + P L+ + +V++A GA H + LT G +L+ G QGQLG
Sbjct: 120 LHE-PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGL---------GSS 169
Query: 219 GMSFLEPGEVP-LKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ FLEP + L I + G Y++ +S G++ +G NN+ QLG +S+ +S
Sbjct: 170 EIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQS-- 227
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
+P L+K+L ++ +A G+ HS+ G ++++G G+LG +++ VT+P
Sbjct: 228 ----SPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMAN-VTQPK 282
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
I L T+ I CG + ++ + L G+G+ + QLG +
Sbjct: 283 KIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTS------------- 329
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
RL P+T PI D+ ++ IA G SF+
Sbjct: 330 ---ARL-------PIT--IPISLTDDRQLSCIAAGGDQSFS 358
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 161/380 (42%), Gaps = 55/380 (14%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
+Y WG ++ +G +GL E + P +++ ++ IASG H V LTS + + G
Sbjct: 1 MYGWG--KNDYGQLGLGSENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFG 257
E GQLG+ Q+S R P V + I V G ++ I+ G + +G
Sbjct: 59 EFGQLGQ--QKSQCR----------PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG 106
Query: 258 LN-NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+ N + + DS P L+ + +A G H +AL EG I ++G
Sbjct: 107 RSLNGELMCKQDS---------LHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWG 157
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ G+LGL + EPT I SL I+ I G S + G L+ WG N QL
Sbjct: 158 SNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQL 217
Query: 377 GNGKEDDILNS---------------------------EGKIYAFGRHDYGRLGLKNVSE 409
G+G D +S G ++++G G+LG +++
Sbjct: 218 GHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMAN 277
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
VT+P I L T+ I CG + ++ + L G+G+ + QLG + P+ I
Sbjct: 278 -VTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLPITI 336
Query: 470 EGKQLNNYTVLQVASGGQHS 489
++ + +A+GG S
Sbjct: 337 PISLTDDRQLSCIAAGGDQS 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G +L+ G GQLGLG +E ++ L+ + ++ G H+ L+ G ++
Sbjct: 148 TEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLF 207
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
TWG N+ G LG + P+ V + + V ++ G+ HSV +G V++WG
Sbjct: 208 TWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWG--HG 265
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G P K+ + G + +I G H + LT + LL G QLG
Sbjct: 266 GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTH 325
Query: 208 TQRSA 212
SA
Sbjct: 326 NDTSA 330
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 34/183 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+Y +G++DYG+LGL + + ++ P+PI + ++++ SIA G
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPSPIDA--NQSVISIASG------------------- 39
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ L S K+Y+ G +++G+LG + + P+ + + I +A G
Sbjct: 40 -------LRHTVYLTSTRKVYSCGSNEFGQLGQQ---KSQCRPSLVTGFGAEEIFHVAAG 89
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S AI G+L+GWG +L K+D + EP ++ ++ +++V+QVA G QH +
Sbjct: 90 DFFSIAIAESGLLFGWGRSLNGELM-CKQDSLHEPKLLD--KIMHWSVVQVACGAQHCIA 146
Query: 492 LAK 494
L +
Sbjct: 147 LTE 149
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G C S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYCH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 177/369 (47%), Gaps = 34/369 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + + +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---L 385
+ P + L +T IACG S + S G +Y +G+G QLG G +
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 386 NSEGKIYAF 394
+G YA+
Sbjct: 340 TVKGNWYAY 348
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + I + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K I + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 180/385 (46%), Gaps = 39/385 (10%)
Query: 12 QAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-- 69
+A +P ++V S G +V + G+G+ GQLG G D +R + + LD
Sbjct: 2 EATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGH 60
Query: 70 NVVEVVVGGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS 126
+V V G HT + +VY+WG D G LG D P+ + K QI+
Sbjct: 61 EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDL-LTPKPIKALHGLKIRQIA 119
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +A+GA+H
Sbjct: 120 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHT 177
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-----VF 239
+T G L G G LG RN R VP K +D V
Sbjct: 178 AAVTEDGELFGWGWGRYGNLGL-----GDRNDRL---------VPQKVSSVDGDKMVMVA 223
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +T +SS G + +G + Y QLG D E + PH +++L + ++
Sbjct: 224 CGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDR-------LVPHRLEALRGDNISQISG 276
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL ++GK+Y +G + +G++G + + + P I QD+ + I+CG + A
Sbjct: 277 GWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCS-PIQIKFPQDQKVIQISCGWRHTLA 335
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + ++ WG G QLG+G+ D
Sbjct: 336 VTDKQNVFSWGRGTNGQLGHGESVD 360
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 182/398 (45%), Gaps = 56/398 (14%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKI 177
++ + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV +
Sbjct: 8 RRVLFISAGASHSVALLSGNIVCSWG--RGEDGQLGHGDAEDRLSPTQLSALDGHEIVSV 65
Query: 178 ASGADHFVMLT-SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-- 234
GADH + +R + + G G GR+ ++S L P P+K H
Sbjct: 66 TCGADHTTAYSVARTEVYSWGW---GDFGRLGHGNSS-------DLLTP--KPIKALHGL 113
Query: 235 -IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G + ++ +G + ++G N QLG +E P I++
Sbjct: 114 KIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDS-------LVPQKIQAFEGIS 166
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
M+A+G H+ A+ +G+++ +G YG LGL + ++ + P + S+ + +ACG
Sbjct: 167 IKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV-PQKVSSVDGDKMVMVACG 225
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
+ ++ S G LY +G QLG+G +D L
Sbjct: 226 WRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALT 285
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
++GK+Y +G + +G++G + + + P I QD+ + I+CG + A+ + ++
Sbjct: 286 TDGKLYGWGWNKFGQVGAGDNIDHCS-PIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFS 344
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
WG G QLG+G+ D PM +E ++ + Q+ S
Sbjct: 345 WGRGTNGQLGHGESVDRNTPMILEALSVDGCSGQQIES 382
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 146/307 (47%), Gaps = 30/307 (9%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G D++ K + L + ++ G H + +T +G+V +WG N
Sbjct: 82 VYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHCLAVTMEGEVQSWGRN 140
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG DS +PQ + + ++AG H+ A+ EDG ++ WG R +G++
Sbjct: 141 QNGQLGLGTTEDS-LVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGR--YGNL 197
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL + P K+ SV G +V +A G H + ++S G L T G + GQLG
Sbjct: 198 GLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGH-----G 252
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
R LE L+ +I + G +T +++ G + +G N + Q+G D
Sbjct: 253 DFEDRLVPHRLE----ALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD--- 305
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
N +P IK D+K ++ G H+LA+ + ++++GR G+LG E
Sbjct: 306 ----NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH---GES 358
Query: 332 VTEPTPI 338
V TP+
Sbjct: 359 VDRNTPM 365
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 33/206 (16%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
++ +++G HS+AL S + ++GR + G+LG + + ++ PT + +L I S+
Sbjct: 8 RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS-PTQLSALDGHEIVSVT 66
Query: 351 CG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
CG + ++++ + ++Y++G D+GRLG N S
Sbjct: 67 CGADHTTAYSV---------------------------ARTEVYSWGWGDFGRLGHGNSS 99
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ +T P PI +L I IACG+ A+ EG + WG QLG G +D L P K
Sbjct: 100 DLLT-PKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQK 158
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAK 494
I+ ++ VA+G +H+ + +
Sbjct: 159 IQA--FEGISIKMVAAGAEHTAAVTE 182
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G C S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYCH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S I+++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + +Q++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIIQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + + +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + I + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K I + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 188/392 (47%), Gaps = 71/392 (18%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG------I 174
K QI++G +HS+AL DG++YAWG +S G +G +++TP+K +
Sbjct: 205 KFSQITSGATHSLALGSDGSLYAWGD--NSSGQVGDNSTTLRQTPVKTNKPANASDQFTF 262
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
IA+G + + S GNL G +GQLG T + L P +VP K
Sbjct: 263 TTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENK----------LTPVKVP-KPAG 311
Query: 235 IDDVFTGV-------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLI 285
+ + FT + + S ++ A+G N Y QLG S S N ++ P L+
Sbjct: 312 VSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNT-SVPTGSDNPAAYSSKPVLV 370
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
+ + FT L++G++HSLAL S+ ++YA+G + GRLG + T P P+ T
Sbjct: 371 STPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFT-PVPVRQPAGVT 429
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNG------------------------- 379
+ + G+ FAI + G LY WG NGY +LG+G
Sbjct: 430 FSQFSAGDTSCFAISTNGDLYAWGW-NGYGRLGDGSNAEDRRTPTLISPPDGASAGFTWA 488
Query: 380 ----KEDDIL--NSEGKIYAFGRHDYGRLGLKN-------VSEP-VTEPTPIPSLQDKTI 425
++D +L S+G +Y++G ++YG+LG+K+ +S P + + + + Q T
Sbjct: 489 RVMVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFTW 548
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
T I G S A+ S+G LY WG NG QLG+
Sbjct: 549 TQINAGWRESSALGSDGNLYTWGWNNGGQLGD 580
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 49/253 (19%)
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS---EP 331
G T TP + + KF+ + SG HSLAL S+G +YA+G + G++G + + P
Sbjct: 191 GTTVTLTPPATRGI---KFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTP 247
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
V P + T T+IA G+ S AI S+G LY WG QLG+G ++
Sbjct: 248 VKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPVKVP 307
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV---------T 412
L S +YA+G + YG+LG N S P +
Sbjct: 308 KPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLG--NTSVPTGSDNPAAYSS 365
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
+P + + T T ++ G S A+ S+ LY WG+ +LG+G + P+ + +
Sbjct: 366 KPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPV--R 423
Query: 473 QLNNYTVLQVASG 485
Q T Q ++G
Sbjct: 424 QPAGVTFSQFSAG 436
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 173/384 (45%), Gaps = 38/384 (9%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI---VKIASG 180
Q+SAGD HS+AL DG VY+WG+ + +G +G + TP+++ +G+ ++++G
Sbjct: 765 QVSAGDDHSLALGSDGNVYSWGA--NKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAG 822
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+ L +G++ G GQLG I +S + + P + + +
Sbjct: 823 TGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGI 882
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC----FFTPHLIKSLSDKKF 293
G+ + + +G +G N + +LG S V +G T TP + +
Sbjct: 883 SAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQ--GETTGFHY 940
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+++G HSLA +++G+ + +G + G LG N S+ +Q K T+ + G
Sbjct: 941 AQVSAGGSHSLATDTQGRAWGWGSNQNGALG--NTSDVALNGYTTTPVQAKPGTNPSGGF 998
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
+ I G+G+ L L+ G+I+++G + G LGL + + T
Sbjct: 999 NPAQII----------AGSGHSL-------ALDDLGRIWSWGGNSNGELGLGDTTT-RTA 1040
Query: 414 PTPIPSLQDKTITSIACGNCV---SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P+ + + + + G+ V S A+D G ++GWG + LG G + P K+
Sbjct: 1041 PSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMS 1100
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
++ V +V +G H++ +A
Sbjct: 1101 NPSGIDHFV-KVCAGTGHTLAVAS 1123
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 46/264 (17%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ S GS+ A+G N+ Q+G+ + +++ T T + FT +A+G H SLA+
Sbjct: 219 LGSDGSLYAWGDNSSGQVGDNSTTLRQ---TPVKTNKPANASDQFTFTTIAAGDHSSLAI 275
Query: 307 NSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
S+G +YA+G + G+LG +N PV P P + T T ++ + A+ S
Sbjct: 276 GSDGNLYAWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNH 335
Query: 364 VLYGWGMGNGY-QLGN---------------------------------GKEDDI-LNSE 388
LY WG NGY QLGN G+ + L S+
Sbjct: 336 NLYAWGW-NGYGQLGNTSVPTGSDNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSD 394
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
++YA+G + GRLG + T P P+ T + + G+ FAI + G LY WG
Sbjct: 395 KQLYAWGLNTSGRLGDGTDIQRFT-PVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWG 453
Query: 449 MGNGY-QLGNGKE-DDILEPMKIE 470
NGY +LG+G +D P I
Sbjct: 454 W-NGYGRLGDGSNAEDRRTPTLIS 476
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 162/390 (41%), Gaps = 45/390 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED---LDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V + G GQLG G +R T + ++ +V G ++ L G V+ W
Sbjct: 780 GNVYSWGANKYGQLGDG-TATDRLTPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAW 838
Query: 94 GCNDEGALGREA---EGDSEF--IPQTVNLPKKAVQ-------ISAGDSHSVALLEDGTV 141
G N G LG A G S + P V P ISAG +H +A+ G
Sbjct: 839 GLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRA 898
Query: 142 YAWGSFRDSHGSMGLKGE-----GIQKTPLKLESVSG------IVKIASGADHFVMLTSR 190
+ WGS + G +G+ GI P+++ + G ++++G H + ++
Sbjct: 899 WGWGS--NEFGKLGVPASTVATTGITTRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQ 956
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISS 249
G G + G LG + + + + +PG P + + G ++ +
Sbjct: 957 GRAWGWGSNQNGALGNTSDVALNGYTTTPVQ-AKPGTNPSGGFNPAQIIAGSGHSLALDD 1015
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD-KKFTMLASGQ--HHSLAL 306
G I ++G N+ +LG D+ + + P ++ ++ FT L + +SLAL
Sbjct: 1016 LGRIWSWGGNSNGELGLGDTTTRTA-------PSMVAMPANVSTFTQLTGSRVSGNSLAL 1068
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI--PSLQDKTITSIACGNCVSFAIDSEGV 364
+ G I+ +G++ G LG + PT + PS D + + G + A+ S+G
Sbjct: 1069 DQNGNIWGWGQNSSGMLGTGGTGS-LNRPTKMSNPSGIDHFV-KVCAGTGHTLAVASDGS 1126
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
GWG + +LGN + + + ++ F
Sbjct: 1127 TLGWGDNSQGRLGNNATETVYSPVSVLFPF 1156
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 53/253 (20%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-KTITSIA 350
+F+ +++G HSLAL S+G +Y++G + YG+LG ++ +T P IP T ++
Sbjct: 762 RFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLT-PVQIPKPTGVNRFTQVS 820
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLG------NGKEDD--------------------- 383
G S A+D +G ++ WG+ + QLG NG
Sbjct: 821 AGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLT 880
Query: 384 ----------ILNSEGKIYAFGRHDYGRLGLKN--------VSEPVTEPTPIPSLQDKTI 425
++ +G+ + +G +++G+LG+ + PV TP
Sbjct: 881 GISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQGETTGFHY 940
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--LEPMKIEGKQLNN----YTV 479
++ G S A D++G +GWG LGN + + ++ K N +
Sbjct: 941 AQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNP 1000
Query: 480 LQVASGGQHSVIL 492
Q+ +G HS+ L
Sbjct: 1001 AQIIAGSGHSLAL 1013
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVS---EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
L S+G +YA+G + G++G + + PV P + T T+IA G+ S AI S+
Sbjct: 219 LGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSD 278
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ--LNNYTVLQVASGGQHSVIL 492
G LY WG QLG+G ++ L P+K+ N +T QV++ H++ L
Sbjct: 279 GNLYAWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFTWTQVSARWDHTLAL 331
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 22/189 (11%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTWGCN 96
+ G +G+LG G D+ +R T V V + G ++ +G +Y WG N
Sbjct: 397 LYAWGLNTSGRLGDGTDI-QRFTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWN 455
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA------VQISAGDSHSVALLEDGTVYAWGSFRDS 150
G LG + + P ++ P A ++ D H +A+ DG +Y+WG +
Sbjct: 456 GYGRLGDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWG--LNE 513
Query: 151 HGSMGLK-----GEGIQKTPLKLESVSGIVK------IASGADHFVMLTSRGNLLTAGCP 199
+G +G+K G I + + +S S + I +G L S GNL T G
Sbjct: 514 YGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWGWN 573
Query: 200 EQGQLGRIT 208
GQLG T
Sbjct: 574 NGGQLGDPT 582
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 35/159 (22%)
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHD 398
P+ + + ++ G+ S A+ S+G +Y WG QLG+G D L
Sbjct: 756 PAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRL------------- 802
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-- 456
PV P P T ++ G S A+D +G ++ WG+ + QLG
Sbjct: 803 ----------TPVQIPKPT---GVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSN 849
Query: 457 ----NGKEDDILEPMKIE---GKQLNNYTVLQVASGGQH 488
NG P++++ G N+T+ +++G H
Sbjct: 850 AIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITH 888
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S I+++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + +Q++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIIQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S I+++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + +Q++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIIQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + + +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + I + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K I + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S I+++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + +Q++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIIQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S I+++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + +Q++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIIQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|432949840|ref|XP_004084284.1| PREDICTED: regulator of chromosome condensation-like, partial
[Oryzias latipes]
Length = 143
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G VL GQGD GQLGLG D+++RK AL+ + V +V GGMHTVCL+E VYT+GCN
Sbjct: 30 GQVLVLGQGDVGQLGLGEDIIQRKKPALLSLPEKVFQVTAGGMHTVCLSESRHVYTFGCN 89
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
DEGALGR+ E SE +P V L +K VQ+SAGDSH+ AL EDG+VY WGSFR
Sbjct: 90 DEGALGRDTTEEGSEMVPGKVTLGEKVVQVSAGDSHTAALTEDGSVYIWGSFR 142
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 181/377 (48%), Gaps = 43/377 (11%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P ++V + S G VV + G+G+ GQLG G D +R + + LD VV
Sbjct: 14 PVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVS 72
Query: 74 VVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDS 130
V G HT +E +VY+WGC+ F PQ + + QI+ GDS
Sbjct: 73 VTCGADHTTAYSESFTQVYSWGCD-------------LFTPQPIKALHGLRIKQIACGDS 119
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHFVMLT 188
H +A+ DG V +WG R+ +G +GL P K+++ G+ VK +A+GA+H +T
Sbjct: 120 HCLAVTMDGEVQSWG--RNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVT 177
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF- 246
G L G G LG RN R L P +V ++ + V G +T
Sbjct: 178 EDGELYGWGWGRYGNLGL-----GDRNDR-----LVPEKVSTVEGVKMVKVACGWRHTIS 227
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+SS G + +G + Y QLG D E TPH +++L + + ++ G H++AL
Sbjct: 228 VSSSGGLYTYGWSKYGQLGHGDFEDH-------LTPHKLEALQENLISEISGGWRHTMAL 280
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
S+GK+Y +G + +G++G+ + + + P + ++ + I+CG + A+ ++
Sbjct: 281 TSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQVKFPHEQKVVHISCGWRHTLAVTERQNVF 339
Query: 367 GWGMGNGYQLGNGKEDD 383
WG G QLG+G+ D
Sbjct: 340 SWGRGTNGQLGHGESID 356
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 68/384 (17%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKI 177
++ + ISAG SHSVALL V +WG D G +G + +P L ++ G +V +
Sbjct: 16 RRVLLISAGASHSVALLXGNVVCSWGRGED--GQLGHGDAEDRLSPTYLSALDGHEVVSV 73
Query: 178 ASGADHFVMLT-SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-- 234
GADH + S + + GC P P+K H
Sbjct: 74 TCGADHTTAYSESFTQVYSWGC----------------------DLFTP--QPIKALHGL 109
Query: 235 -IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I + G + ++ G + ++G N QLG +E P I++
Sbjct: 110 RIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDS-------LVPQKIQAFQGVS 162
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
M+A+G H+ A+ +G++Y +G YG LGL + ++ + P + +++ + +ACG
Sbjct: 163 VKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACG 221
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
+ ++ S G LY +G QLG+G +D L
Sbjct: 222 WRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALT 281
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
S+GK+Y +G + +G++G+ + + + P + ++ + I+CG + A+ ++
Sbjct: 282 SDGKLYGWGWNKFGQVGVGDNVDHCS-PVQVKFPHEQKVVHISCGWRHTLAVTERQNVFS 340
Query: 447 WGMGNGYQLGNGKEDDILEPMKIE 470
WG G QLG+G+ D P IE
Sbjct: 341 WGRGTNGQLGHGESIDRNIPKMIE 364
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 58/351 (16%)
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
V ++ I++GA H V L + + G E GQLG + R + +S L+ EV
Sbjct: 15 VRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGH--GDAEDRLSPTYLSALDGHEV-- 70
Query: 231 KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTC-FFTPHLIKSLS 289
+S + G ++ + E+ ++V G C FTP IK+L
Sbjct: 71 ----------------VS-----VTCGADHTTAYSESFTQVYSWG--CDLFTPQPIKALH 107
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A G H LA+ +G++ ++GR+ G+LGL + + P I + Q ++ +
Sbjct: 108 GLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVSVKMV 166
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------ 385
A G + A+ +G LYGWG G LG G +D L
Sbjct: 167 AAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTI 226
Query: 386 --NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+S G +Y +G YG+LG + + +T P + +LQ+ I+ I+ G + A+ S+G
Sbjct: 227 SVSSSGGLYTYGWSKYGQLGHGDFEDHLT-PHKLEALQENLISEISGGWRHTMALTSDGK 285
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
LYGWG Q+G G D P+++ K + V+ ++ G +H++ + +
Sbjct: 286 LYGWGWNKFGQVGVGDNVDHCSPVQV--KFPHEQKVVHISCGWRHTLAVTE 334
>gi|451847555|gb|EMD60862.1| hypothetical protein COCSADRAFT_97314 [Cochliobolus sativus ND90Pr]
Length = 649
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 206/484 (42%), Gaps = 85/484 (17%)
Query: 39 VLTCGQGDTGQLGLGP-----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G+G +G+LG G DV + + ++ NVV + GGMH V LT+D K+ TW
Sbjct: 221 VFVFGEGGSGELGFGATKKAIDVKRPRYNEALTNM-NVVRIATGGMHVVALTKDNKILTW 279
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G ND GALGR+ S +V + + G + D G
Sbjct: 280 GVNDNGALGRDTS-----------------------SANVKMRDVGADDSDSDSEDETG- 315
Query: 154 MGLKGEGIQKTPLKLE---SVSGIVKIASGADHFVMLTSRGNLLTAGC--PEQGQLGRIT 208
GL E P+ E + V +A+G LT+ G + G +G LG
Sbjct: 316 -GLNDEEATPKPVPAEFFPEDTTFVDVAAGDSCSFALTTEGAVYGWGTFRKNEGILG--- 371
Query: 209 QRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGE 266
RG + P V L K + + G + +I K + A+G +QLG
Sbjct: 372 -------FERG-NHTAPRPVYLDTVKKVTQIVCGTNHVYILDKDRHVYAWGNGQQNQLGR 423
Query: 267 ADSEVQK----SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+E N F IK S ++ +ASG +H LA+ +G I+A+G ++Y
Sbjct: 424 RVTERNLHQALQPNRIGFHDTSIKKHS-QRIASIASGDYHGLAIAEDGHIWAWGANNYCE 482
Query: 323 LGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG- 377
G + + V +P I SL+ K++ S+A G + AI +G + WG +G Q G
Sbjct: 483 TGYTDNAGAEDASVLQPKIIHSLEGKSVESLAAGAHHNLAITKDGQVLVWGRCDGAQTGL 542
Query: 378 -------NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
ED +L + GK ++ V +PTP+P+L K I + AC
Sbjct: 543 PPSELDAETDEDKVLKNNGK-----------------AKIVVQPTPLPNL--KNIVTGAC 583
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S ID +G Y WG YQ G G +DDI P I+ + + GGQ+S+
Sbjct: 584 GPDHSIVIDKDGKAYSWGFSANYQTGQGTDDDIEVPTMIDNTAVRETKLTWAGCGGQYSI 643
Query: 491 ILAK 494
+ +K
Sbjct: 644 LASK 647
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S I+++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + +Q++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIIQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CQKQTSPQLIKSLL---GIPF----MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 166/394 (42%), Gaps = 65/394 (16%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+ WG+ S+G +GL G E I P + + + + G H V + G + T
Sbjct: 1 MLCWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
GC + GQLG R V L ++I V G +T ++ KG + A
Sbjct: 59 GCNDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYA 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GL++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +
Sbjct: 108 WGLDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G++ YG+LGL + T P I SL +A G SF + G ++GWG Q
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG E+D L EG ++ FG YG+LG + S
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 410 PVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L +T +ACG S + S G +Y +G+G QLG G + P
Sbjct: 282 EIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 469 IEGKQL-------------NNYTVLQVASGGQHS 489
++G + + V ++ SGG S
Sbjct: 341 VKGNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ +G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGL---GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 -----NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 276 HNSTSHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Query: 325 LKNVS 329
+ S
Sbjct: 329 TGSTS 333
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 173/353 (49%), Gaps = 35/353 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
+ AS + ++ + +V G ++ ++ G+I +G N + QLG
Sbjct: 175 CNKQASPQLIKSLTGIPFMQVAAG---------GAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 226 DENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 328 VSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 279 TSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++++G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S++GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLI--KSLTGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 155/363 (42%), Gaps = 52/363 (14%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+ WG+ S G +GL G E I P K + + + G H V + G + T
Sbjct: 1 MLCWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
GC + GQLG R V L ++I V G +T ++ KG + A
Sbjct: 59 GCNDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GL++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +
Sbjct: 108 WGLDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G++ YG+LGL + P I SL +A G SF + G ++GWG Q
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG E+D L EG ++ FG YG+LG + S
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 410 PVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L +T IACG S + S G +Y +G+G QLG G + P
Sbjct: 282 EIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 469 IEG 471
++G
Sbjct: 341 VKG 343
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 36/305 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ +G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 -----NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 276 HNSTSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Query: 325 LKNVS 329
+ S
Sbjct: 329 TGSTS 333
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 73/409 (17%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V++ GG ++ + DG V+ WG P V V + AG +
Sbjct: 35 VKIAAGGARSLAIKSDGTVWAWGGT----------------PVPVQNLTGVVAVEAGSFY 78
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S+AL DGTV+AWG + +G +G + TP+++++++G+V IA+G H + L S G
Sbjct: 79 SLALKSDGTVWAWGD--NYYGQLGDGTTTNRYTPVQVQNLTGVVAIAAGGGHSLALKSDG 136
Query: 192 NLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
+ G GQL G IT R+ P +V + G ++ + S
Sbjct: 137 TVWAWGYNGYGQLGDGTITNRT------------TPVQVKNLTGVVAVAAGGGHSLALKS 184
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ A+G N Y QLG+ + + +TP +++L+ +A+G HSLAL S+
Sbjct: 185 DGTVWAWGYNGYGQLGDGTTMNR-------YTPVQVQNLT--GVVAIAAGSSHSLALKSD 235
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++A+G + YG+LG + T P + L D + +IA GN S A+ S+G ++ WG
Sbjct: 236 GTVWAWGNNGYGQLG-DGTTTNRTTPVRVQGLTD--VVAIAAGNEHSLALKSDGTVWTWG 292
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
QLG+G + R+ TP+ + +IA
Sbjct: 293 WNYSGQLGDGTTTN------------RY-----------------TPVQVQNLTGVVAIA 323
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
G S A+ S+G ++ WG + +LG+G D P+++ G L T
Sbjct: 324 AGGGHSLALKSDGTVWAWGNNDWGELGDGTRTDRHTPVQVSGLNLGQQT 372
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 31/292 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G R T V++L VV + GG H++ L DG V+ WG N
Sbjct: 86 GTVWAWGDNYYGQLGDG-TTTNRYTPVQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGYN 144
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + Q NL V ++AG HS+AL DGTV+AWG + +G +G
Sbjct: 145 GYGQLGDGTITNRTTPVQVKNL-TGVVAVAAGGGHSLALKSDGTVWAWG--YNGYGQLGD 201
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP+++++++G+V IA+G+ H + L S G + G GQLG T + +
Sbjct: 202 GTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTT-- 259
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
P++ + + DV ++ + S G++ +G N QLG+ +
Sbjct: 260 ------------PVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTT--- 304
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
T +TP +++L+ +A+G HSLAL S+G ++A+G +D+G LG
Sbjct: 305 ----TNRYTPVQVQNLT--GVVAIAAGGGHSLALKSDGTVWAWGNNDWGELG 350
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 25/319 (7%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
V++L VV V G +++ L DG V+ WG N G LG + + + P V V
Sbjct: 63 VQNLTGVVAVEAGSFYSLALKSDGTVWAWGDNYYGQLG-DGTTTNRYTPVQVQNLTGVVA 121
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
I+AG HS+AL DGTV+AWG + +G +G + TP+++++++G+V +A+G H
Sbjct: 122 IAAGGGHSLALKSDGTVWAWG--YNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGGHS 179
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L S G + G GQLG T M+ P +V + ++
Sbjct: 180 LALKSDGTVWAWGYNGYGQLGDGTT----------MNRYTPVQVQNLTGVVAIAAGSSHS 229
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ S G++ A+G N Y QLG+ + T TP ++ L+D +A+G HSL
Sbjct: 230 LALKSDGTVWAWGNNGYGQLGDGTT-------TNRTTPVRVQGLTD--VVAIAAGNEHSL 280
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL S+G ++ +G + G+LG + TP+ + +IA G S A+ S+G
Sbjct: 281 ALKSDGTVWTWGWNYSGQLGDGTTTN---RYTPVQVQNLTGVVAIAAGGGHSLALKSDGT 337
Query: 365 LYGWGMGNGYQLGNGKEDD 383
++ WG + +LG+G D
Sbjct: 338 VWAWGNNDWGELGDGTRTD 356
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + R T V++L VV V GG H++ L DG V+ WG N
Sbjct: 136 GTVWAWGYNGYGQLGDG-TITNRTTPVQVKNLTGVVAVAAGGGHSLALKSDGTVWAWGYN 194
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + + P V V I+AG SHS+AL DGTV+AWG + +G +G
Sbjct: 195 GYGQLG-DGTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAWG--NNGYGQLGD 251
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP++++ ++ +V IA+G +H + L S G + T G GQLG T +
Sbjct: 252 GTTTNRTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNR---- 307
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGE 266
P++ +++ V G ++ + S G++ A+G N++ +LG+
Sbjct: 308 ----------YTPVQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNNDWGELGD 351
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G +GQLG G R T V++L VV + GG H++ L DG V+ WG N
Sbjct: 286 GTVWTWGWNYSGQLGDG-TTTNRYTPVQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNN 344
Query: 97 DEGALGREAEGD-------------SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
D G LG D + P T+ + ++ I AG + ++++ Y+
Sbjct: 345 DWGELGDGTRTDRHTPVQVSGLNLGQQTTPDTLLVSPASLSIIAGQTQQLSVVMR---YS 401
Query: 144 WGSFRD 149
GS +D
Sbjct: 402 DGSTQD 407
>gi|409049848|gb|EKM59325.1| hypothetical protein PHACADRAFT_205529 [Phanerochaete carnosa
HHB-10118-sp]
Length = 569
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 185/401 (46%), Gaps = 70/401 (17%)
Query: 38 VVLTCGQGDTGQLGLGPDVM---ERKTF-ALVED--LDNVV--------EVVVGGMHTVC 83
V G G+ GQ G+G D + E+ T LVE+ + V V GGM+++
Sbjct: 137 VPFAWGAGNFGQFGMGEDALGEFEKPTRNKLVEEKMAEGVFGGEGAGFEAVSAGGMYSLF 196
Query: 84 LTEDGKVYTWGCNDEGALGR------EAEGDSEFIP-----------QT-VNLPKKAVQI 125
+ E G V++ G ND+ ALGR + + + EF+ QT V+ +A +I
Sbjct: 197 IDEKGTVWSCGTNDDAALGRITTDVPDPDKEGEFLDVDTLTAQPFPLQTLVDEGFRATRI 256
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPL-------KLESVSGIVKI 177
+ GDS S A+ ++G + WGSFR G +G K G+ Q TP+ K + +
Sbjct: 257 ATGDSISAAISQEGELRVWGSFRSVEGLLGFKSGQNHQFTPISTMELPSKPDDAEKFTSV 316
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+G +H V+LT+ GN+ T G EQGQLGR RR + P ++ L +
Sbjct: 317 VAGNNHLVVLTTHGNIFTWGAGEQGQLGRKVLE------RRKIHGTTPEKIVLHSRTRKA 370
Query: 238 VFTGV--YNTF-ISSKGSILAFGLNNYSQLG------EADSEVQKSGNTCFFTPHLIKSL 288
V G Y +F + +G + A+GLNN Q G ADSEV + L
Sbjct: 371 VVVGAGNYTSFAVDEQGGVWAWGLNNMGQTGTGFTNAAADSEVGLPKKVVGLS---KSEL 427
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-----------KNVSEPVTEPTP 337
+ G+HH+L L + GK++A GR + G+LGL ++ + V PT
Sbjct: 428 DGDHVVQIVGGEHHTLFLTATGKVFACGRSNGGQLGLPEDHSAFQDRDEDHQDLVAVPTL 487
Query: 338 IP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+P D + I+ G + A+ +G LY WG G +LG
Sbjct: 488 VPFPDDDDPVVHISAGIHNNMAVTKDGALYTWGTGPQSELG 528
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 164/396 (41%), Gaps = 80/396 (20%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
+G +++G + + + +G + + G + LGRIT + + + FL+ +
Sbjct: 182 AGFEAVSAGGMYSLFIDEKGTVWSCGTNDDAALGRIT--TDVPDPDKEGEFLDVDTLTAQ 239
Query: 229 PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE-----ADSEVQ-----KSGNTC 278
P + + D G T I++ SI A SQ GE + V+ KSG
Sbjct: 240 PFPLQTLVD--EGFRATRIATGDSISA----AISQEGELRVWGSFRSVEGLLGFKSGQNH 293
Query: 279 FFTPHLIKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV- 332
FTP L K KFT + +G +H + L + G I+ +G + G+LG K +
Sbjct: 294 QFTPISTMELPSKPDDAEKFTSVVAGNNHLVVLTTHGNIFTWGAGEQGQLGRKVLERRKI 353
Query: 333 --TEPTPIPSLQDKTITSIA--CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
T P I L +T ++ GN SFA+D +G ++ WG+ N Q G G + +SE
Sbjct: 354 HGTTPEKI-VLHSRTRKAVVVGAGNYTSFAVDEQGGVWAWGLNNMGQTGTGFTNAAADSE 412
Query: 389 ------------------------------------GKIYAFGRHDYGRLGL-------- 404
GK++A GR + G+LGL
Sbjct: 413 VGLPKKVVGLSKSELDGDHVVQIVGGEHHTLFLTATGKVFACGRSNGGQLGLPEDHSAFQ 472
Query: 405 ---KNVSEPVTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
++ + V PT +P D + I+ G + A+ +G LY WG G +LG E
Sbjct: 473 DRDEDHQDLVAVPTLVPFPDDDDPVVHISAGIHNNMAVTKDGALYTWGTGPQSELGVVGE 532
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ P I + + + + GGQH++ L + K
Sbjct: 533 SEVKTPKMIVRRDGGAWAAVAGSCGGQHTLALLRKK 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF---IPQTVNL---P 119
+D + VV G H V LT G ++TWG ++G LGR+ + P+ + L
Sbjct: 308 DDAEKFTSVVAGNNHLVVLTTHGNIFTWGAGEQGQLGRKVLERRKIHGTTPEKIVLHSRT 367
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWG-------------SFRDSHGSMGLKGEGIQKTPL 166
+KAV + AG+ S A+ E G V+AWG + DS + K G+ K+ L
Sbjct: 368 RKAVVVGAGNYTSFAVDEQGGVWAWGLNNMGQTGTGFTNAAADSEVGLPKKVVGLSKSEL 427
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
+ V V+I G H + LT+ G + G GQLG SA ++ R +
Sbjct: 428 DGDHV---VQIVGGEHHTLFLTATGKVFACGRSNGGQLGLPEDHSAFQD--RDEDHQDLV 482
Query: 227 EVPLKRKHIDD------VFTGVYNTF-ISSKGSILAFGLNNYSQLGEA-DSEVQKSGNTC 278
VP DD + G++N ++ G++ +G S+LG +SEV+
Sbjct: 483 AVPTLVPFPDDDDPVVHISAGIHNNMAVTKDGALYTWGTGPQSELGVVGESEVK------ 536
Query: 279 FFTPHLIKSLSDKKFTMLAS--GQHHSLAL 306
TP +I + +A G H+LAL
Sbjct: 537 --TPKMIVRRDGGAWAAVAGSCGGQHTLAL 564
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 84/211 (39%), Gaps = 50/211 (23%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERK--------TFALVEDLDNVVEVVVGGMHTVCLTEDG 88
G + T G G+ GQLG V+ER+ L V V G + + E G
Sbjct: 330 GNIFTWGAGEQGQLGR--KVLERRKIHGTTPEKIVLHSRTRKAVVVGAGNYTSFAVDEQG 387
Query: 89 KVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKK-------------AVQISAGDSHS 132
V+ WG N+ G G A DSE V LPKK VQI G+ H+
Sbjct: 388 GVWAWGLNNMGQTGTGFTNAAADSE-----VGLPKKVVGLSKSELDGDHVVQIVGGEHHT 442
Query: 133 VALLEDGTVYAWGSFRDSHGSMGL---------KGEGIQK-------TPLKLESVSGIVK 176
+ L G V+A G R + G +GL + E Q P + +V
Sbjct: 443 LFLTATGKVFACG--RSNGGQLGLPEDHSAFQDRDEDHQDLVAVPTLVPFP-DDDDPVVH 499
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
I++G + + +T G L T G Q +LG +
Sbjct: 500 ISAGIHNNMAVTKDGALYTWGTGPQSELGVV 530
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 54/131 (41%), Gaps = 31/131 (23%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD--------------VMERKTFALVEDLDNVVEVVVGGM 79
T G V CG+ + GQLGL D V +D D VV + G
Sbjct: 446 TATGKVFACGRSNGGQLGLPEDHSAFQDRDEDHQDLVAVPTLVPFPDDDDPVVHISAGIH 505
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----------KAVQISAGD 129
+ + +T+DG +YTWG + LG G+SE V PK AV S G
Sbjct: 506 NNMAVTKDGALYTWGTGPQSELG--VVGESE-----VKTPKMIVRRDGGAWAAVAGSCGG 558
Query: 130 SHSVALLEDGT 140
H++ALL T
Sbjct: 559 QHTLALLRKKT 569
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI ++IA+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +Q+A+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQIAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 181/384 (47%), Gaps = 39/384 (10%)
Query: 13 AENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--N 70
A +P +V + S G VV + G+G+ GQLG G D +R + LD +
Sbjct: 9 ATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRPLPTQLSALDAQH 67
Query: 71 VVEVVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISA 127
+ + G HT+ +E ++Y+WG D G LG D IPQ + + + QI+
Sbjct: 68 IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSD-LLIPQPIIALQGLRIKQIAC 126
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
GDSH +A+ +G V +WG R+ +G +GL P K+++ G I +A+GA+H V
Sbjct: 127 GDSHCLAVTMEGEVQSWG--RNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSV 184
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID-----DVFT 240
+T G L G G LG RN R P K +D V
Sbjct: 185 AITENGELYGWGWGRYGNLGL-----GDRNDRWN---------PEKVSSVDCDKMVMVAC 230
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +T +SS G I +G + Y QLG + E P +++LSDK + ++ G
Sbjct: 231 GWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDS-------LVPQKLQALSDKLISQVSGG 283
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HS+AL S G ++ +G + +G++G+ + + + P + QD+ + I+CG + A+
Sbjct: 284 WRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS-PVQVKFPQDQRVVQISCGWRHTIAV 342
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG+G D
Sbjct: 343 TEKENVFSWGRGTNGQLGHGDTID 366
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 48/351 (13%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S ++ I++GA H V L S + + G E GQLG + R +S L+
Sbjct: 14 SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGH--GDTDDRPLPTQLSALDA------ 65
Query: 232 RKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+HID + G +T + S+ + ++G ++ +LG +S + P I +L
Sbjct: 66 -QHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNS-------SDLLIPQPIIALQ 117
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A G H LA+ EG++ ++GR+ G+LGL N + + P I + + I +
Sbjct: 118 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGVPIKMV 176
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE--------------------- 388
A G S AI G LYGWG G LG G +D N E
Sbjct: 177 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTI 236
Query: 389 -----GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
G IY +G YG+LG N + + P + +L DK I+ ++ G S A+ S G+
Sbjct: 237 SVSSSGGIYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTSTGL 295
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
L+GWG Q+G G D P++++ Q + V+Q++ G +H++ + +
Sbjct: 296 LFGWGWNKFGQVGVGDNLDHCSPVQVKFPQ--DQRVVQISCGWRHTIAVTE 344
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 179/424 (42%), Gaps = 59/424 (13%)
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT 115
+ME + A V+ + G HTV L V +WG ++G LG D Q
Sbjct: 1 MMELEATAATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQL 60
Query: 116 VNLPKKAV-QISAGDSHSVALLED-GTVYAWGSFRDSHGSMGLKGEG------IQKTPLK 167
L + + I+ G H++A E +Y+WG G G G G I + +
Sbjct: 61 SALDAQHIDSIACGADHTLAYSESRNELYSWG-----WGDFGRLGHGNSSDLLIPQPIIA 115
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
L+ + I +IA G H + +T G + + G + GQLG + S ++ +F
Sbjct: 116 LQGLR-IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLG-LGNTEDSLVPQKIQAF---KG 170
Query: 228 VPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
VP+K V G ++ I+ G + +G Y LG D + + P +
Sbjct: 171 VPIKM-----VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDR-------WNPEKVS 218
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
S+ K M+A G H+++++S G IY +G YG+LG N + + P + +L DK I
Sbjct: 219 SVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLI 277
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ ++ G S A+ S G+L+GWG Q+G G D +
Sbjct: 278 SQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS-------------------- 317
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
P + QD+ + I+CG + A+ + ++ WG G QLG+G D P
Sbjct: 318 -------PVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSP 370
Query: 467 MKIE 470
IE
Sbjct: 371 KIIE 374
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI ++IA+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +Q+A+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQIAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 193/437 (44%), Gaps = 93/437 (21%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
++ G G+ GQLG+G + E++ LV+ L + VV G +++ + +DGK++TWG N
Sbjct: 7 IIAWGSGEDGQLGIGSN-EEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--------KAVQISAGDSHSVALLEDGTVYAWGSFR 148
LG AE SE +T N P K VQ + G H +A+ + G YAWG
Sbjct: 66 QRATLGHPAETKSEN--KTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGG-- 121
Query: 149 DSHGSMGLKGEGIQKT----------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
+ +G G + E T P + + ++A+G H V+LT G++ T G
Sbjct: 122 NEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ 181
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSIL 254
P G I Q S VP++ + +++V +N + G++
Sbjct: 182 PW--PPGDIKQIS----------------VPVRVQGLENVRLIAVGAFHNLALQEDGTLW 223
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
A+G N Y QLG D++ + P ++ LSD +A+G HS AL EG++Y
Sbjct: 224 AWGNNEYGQLGTGDTQPRSQ-------PIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYG 276
Query: 315 FGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+GR ++GRLG + + P + L + I ++CG S A+
Sbjct: 277 WGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVAL-------------- 322
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKTITS--- 427
+G +++FGR D+GRLG +P+ P +P QD + T+
Sbjct: 323 ------------TRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEG 370
Query: 428 ------IACGNCVSFAI 438
+ACG + AI
Sbjct: 371 HWIAKLVACGGRHTLAI 387
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 48/340 (14%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ S +++ G E GQLG S + + ++ L+ I V G N+
Sbjct: 1 MDSHSHIIAWGSGEDGQLG-----IGSNEEKEWVCLVKA----LQPHRIRSVVAGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I+ G + +G N + LG KS N TP +K+LS K A G H LA
Sbjct: 52 AIADDGKLFTWGWNQRATLGHPAE--TKSENKTENTPSQVKALSSVKIVQAAIGGWHCLA 109
Query: 306 LNSEGKIYAFGRHDYGRLGLK-----NVSEPVTEPTPIPS--LQDKTITSIACGNCVSFA 358
++ +G+ YA+G ++YG+ G + P+ IP + +A G S
Sbjct: 110 VDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVV 169
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFGR 396
+ EG ++ WG + G+ K+ + L +G ++A+G
Sbjct: 170 LTREGHVWTWG--QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGN 227
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
++YG+LG + ++P ++P + L D T+ IA G S A+ EG +YGWG G +LG
Sbjct: 228 NEYGQLGTGD-TQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLG 286
Query: 457 NGKED--DILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G D + P K++ L ++QV+ GG HSV L +
Sbjct: 287 FGDSDKSSKMVPQKVQ--LLAGEDIVQVSCGGTHSVALTR 324
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 194/432 (44%), Gaps = 68/432 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ++G LG + + E++ L P + + AG +S+A+ +DG ++ WG
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGW-- 64
Query: 149 DSHGSMGLKGE-----GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ ++G E + TP +++++S IV+ A G H + + +G G E
Sbjct: 65 NQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 124
Query: 202 GQLGRITQRS--ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
GQ G +R R RR + + L + + G ++ ++ +G + +G
Sbjct: 125 GQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQV--AAGGTHSVVLTREGHVWTWG-- 180
Query: 260 NYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ G+ + P ++ L + + ++A G H+LAL +G ++A+G +
Sbjct: 181 ----------QPWPPGDIKQISVPVRVQGLENVR--LIAVGAFHNLALQEDGTLWAWGNN 228
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+YG+LG + ++P ++P + L D T+ IA G S A
Sbjct: 229 EYGQLGTGD-TQPRSQPIRVQGLSDLTLVDIAAGGWHSTA-------------------- 267
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFA 437
L EG++Y +GR ++GRLG + + P + L + I ++CG S A
Sbjct: 268 ------LTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVA 321
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI----------EGKQLNNYTVLQ-VASGG 486
+ +G ++ +G G+ +LG G++ +PM++ G + + + VA GG
Sbjct: 322 LTRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGG 381
Query: 487 QHSVILAKPKPN 498
+H++ + + K N
Sbjct: 382 RHTLAIVEWKSN 393
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 37/212 (17%)
Query: 6 KKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQ----GDTGQLGLGPDVMERKT 61
K V+R+ A + V +T E G V T GQ GD Q+ +
Sbjct: 154 KLVVRQVAAGGTHSVVLTRE-----------GHVWTWGQPWPPGDIKQISV--------- 193
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
V+ L+NV + VG H + L EDG ++ WG N+ G LG GD++ Q + +
Sbjct: 194 PVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG---TGDTQPRSQPIRVQGL 250
Query: 122 A----VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL--KGEGIQKTPLKLESVSG-- 173
+ V I+AG HS AL ++G VY WG R HG +G + + P K++ ++G
Sbjct: 251 SDLTLVDIAAGGWHSTALTDEGEVYGWG--RGEHGRLGFGDSDKSSKMVPQKVQLLAGED 308
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
IV+++ G H V LT G++ + G + G+LG
Sbjct: 309 IVQVSCGGTHSVALTRDGHMFSFGRGDHGRLG 340
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT- 208
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 209 -QRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQTSPQLLKSLVGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT- 208
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 209 -QRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQTSPQLLKSLVGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT- 208
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 209 -QRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQTSPQLLKSLVGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 142/300 (47%), Gaps = 36/300 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ +G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+GL GI Q +P ++S+ GI ++IA+G H +LT G + G + GQLG
Sbjct: 168 QLGL---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 -----NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 276 HNSTSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +Q+A+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQIAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI ++IA+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +Q+A+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQIAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 280 SHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|327302716|ref|XP_003236050.1| hypothetical protein TERG_03100 [Trichophyton rubrum CBS 118892]
gi|326461392|gb|EGD86845.1| hypothetical protein TERG_03100 [Trichophyton rubrum CBS 118892]
Length = 467
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 176/405 (43%), Gaps = 78/405 (19%)
Query: 39 VLTCGQGDTGQLGLGP-DVMERKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYTW 93
V G G + +LGLGP + ++ K L +LD VV++ GGMH LT + + TW
Sbjct: 47 VYVFGSGSSAELGLGPKNAIDVKRPRLNTNLDAEKVGVVDIGAGGMHAAALTHNNHILTW 106
Query: 94 GCNDEGALGREAEGD----------------------SEFIPQTVNLPK-----KAVQIS 126
G ND ALGRE D E IP + K K Q++
Sbjct: 107 GVNDNCALGRETTWDGGLKDMADDDESVASDEVELNPREAIPTAIPREKFPEGAKFCQVA 166
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVM 186
AGDS + AL EDG VY WGSF + G G + + K + G+ KI+
Sbjct: 167 AGDSATFALTEDGFVYGWGSFVTTEGERGWWNKELIKMQSDPVMILGLEKIS-------- 218
Query: 187 LTSRGNLLTAGCPEQ-GQLGRITQRSASRNARRGMSFLE------PGEVPL-KRKHIDDV 238
L+ G PEQ G+ R+ +R + N + L PG V L K K I +
Sbjct: 219 -------LSWGRPEQVGRHIRVDRRKTAGNKNASIDKLRNDIGLVPGLVALPKSKRIISI 271
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G ++F I S G +GLNN+ Q A + G + P L +K M+
Sbjct: 272 HAGSDHSFAIDSNGDTWTWGLNNFGQ--TAVNVGAGKGGSTIVRPQKATMLIGQKMKMIQ 329
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLK----NVSEP------------VTEPTPIPSL 341
G+HHS+ + +G+ +GR D ++G+ ++ +P + +PTP+P
Sbjct: 330 GGRHHSIGITQDGQCLVWGRMDGAQMGIDYSTLHLDDPQIVISERGKPRILLDPTPLPI- 388
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDIL 385
A G+ + I SEG Y WG+ YQ G G + DDIL
Sbjct: 389 --PNCAFAAAGSDHNLLITSEGKAYTWGINATYQCGQGPDTDDIL 431
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI ++IA+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +Q+A+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQIAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI ++IA+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +Q+A+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQIAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|171915079|ref|ZP_02930549.1| RCC1 repeat domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 1933
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 244/551 (44%), Gaps = 90/551 (16%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
+V QA + V + + ++ +L K+ G V G GQLG G + M R T V
Sbjct: 251 RVSPVQATGLTDVVDLAAGSLHSLALKSDG-TVWAFGANFEGQLGDGTNTM-RLTAVQVS 308
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS 126
L +VV + G H++ L DG V+ +G N+ G LG + S P V+ V I+
Sbjct: 309 ALTDVVAIAAAGRHSLALKSDGTVWAFGANEAGQLG-DGTTTSRNAPVQVSGLTGVVAIA 367
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVM 186
AG +HS+AL DGTV+A+G+ +++G +G P+++ +++ + IA+GA+H V+
Sbjct: 368 AGGAHSLALKADGTVWAFGA--NTYGQLGDGSLTAGTVPVEM-AITDVAAIAAGAEHSVL 424
Query: 187 LTSRGNLLTAGCPEQGQLG------------------RITQRSASRN--------ARRGM 220
+ + G L G G+LG T ++ N A G
Sbjct: 425 MKADGTLWGVGYSAGGRLGGASPSPRKLPMPVSGVTTVATLKAGGDNTGVVRGNGAVLGF 484
Query: 221 SF----------LEPGEVPLK---RKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGE 266
+ + P VP++ + DV G +T ++ + G++ ++GLN+ QLG
Sbjct: 485 GYNHAGQLGNGGVLPSSVPVQPTGLSGVRDVGVGYNHTVVAKTDGTVWSYGLNSLGQLGV 544
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
Q TP + +LSD K +A G SL L ++G ++ FG + G LG
Sbjct: 545 TAGASQ-------LTPVQVTALSDAK--AVAVGYDFSLVLKTDGTVWGFGSNTNGTLGDG 595
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNG------ 379
P + D IT++A G S + S+G ++ +G GN Y QLG+G
Sbjct: 596 TFVSSRATPAQVSGTVD--ITAVAAGRGHSALLKSDGTVWTFG-GNTYGQLGDGTTTSRY 652
Query: 380 ------------------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ +L +G ++AFG + G+LG + T T +
Sbjct: 653 APVQATGLTGAVAVAAGGRHTVVLKGDGTVWAFGGNASGQLGDGTTT---TRLTAVQMSG 709
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
+ +IA G + A+ S+G ++ G QLG+G D L +++ G L
Sbjct: 710 LTNVVAIAVGEEHTVAVRSDGTVWAAGKNASGQLGDGTVTDRLTAVQVPGVT----HALA 765
Query: 482 VASGGQHSVIL 492
VA+G H++ L
Sbjct: 766 VAAGRGHTLAL 776
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 228/513 (44%), Gaps = 60/513 (11%)
Query: 6 KKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALV 65
L QA + + V VT+ A T ++ G + G GQLGLG + + V
Sbjct: 148 SSALPVQAGSLTDVVCVTAGAAHTAAVRSDG-TLWMYGLNTFGQLGLGYASVSVWSPTQV 206
Query: 66 EDLDNV-VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
L V +V G +HT+ L DG V+ +G N G LG + P V
Sbjct: 207 GALSGVTADVAAGDLHTLVLKTDGTVWGFGENGVGNLG-DGTTTGRVSPVQATGLTDVVD 265
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
++AG HS+AL DGTV+A+G+ + G +G ++ T +++ +++ +V IA+ H
Sbjct: 266 LAAGSLHSLALKSDGTVWAFGA--NFEGQLGDGTNTMRLTAVQVSALTDVVAIAAAGRHS 323
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ L S G + G E GQLG T + SRNA +S L G V + G ++
Sbjct: 324 LALKSDGTVWAFGANEAGQLGDGT--TTSRNAPVQVSGLT-GVVAIAAG-------GAHS 373
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ + G++ AFG N Y QLG+ G+ T + +++D +A+G HS+
Sbjct: 374 LALKADGTVWAFGANTYGQLGD--------GSLTAGTVPVEMAITD--VAAIAAGAEHSV 423
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
+ ++G ++ G GRLG + P P+P T+ ++ G + + G
Sbjct: 424 LMKADGTLWGVGYSAGGRLG---GASPSPRKLPMPVSGVTTVATLKAGGDNTGVVRGNGA 480
Query: 365 LYGWGMGNGYQLGNG------------------------KEDDILNSEGKIYAFGRHDYG 400
+ G+G + QLGNG + ++G ++++G + G
Sbjct: 481 VLGFGYNHAGQLGNGGVLPSSVPVQPTGLSGVRDVGVGYNHTVVAKTDGTVWSYGLNSLG 540
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK- 459
+LG+ + +T P + +L D ++A G S + ++G ++G+G LG+G
Sbjct: 541 QLGVTAGASQLT-PVQVTALSDAK--AVAVGYDFSLVLKTDGTVWGFGSNTNGTLGDGTF 597
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P ++ G + VA+G HS +L
Sbjct: 598 VSSRATPAQVSG----TVDITAVAAGRGHSALL 626
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 66/464 (14%)
Query: 37 GVVLTCGQGDTGQLGL---GPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G + GQLG+ G + + +L + VV V G HT + DG ++ +
Sbjct: 128 GTVWGVGAAELGQLGVSLTGSSALPVQAGSLTD----VVCVTAGAAHTAAVRSDGTLWMY 183
Query: 94 GCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G N G LG S + P V L ++AGD H++ L DGTV WG + G
Sbjct: 184 GLNTFGQLGLGYASVSVWSPTQVGALSGVTADVAAGDLHTLVLKTDGTV--WGFGENGVG 241
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
++G + +P++ ++ +V +A+G+ H + L S G + G +GQLG T
Sbjct: 242 NLGDGTTTGRVSPVQATGLTDVVDLAAGSLHSLALKSDGTVWAFGANFEGQLGDGT---- 297
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
N R L +V + G ++ + S G++ AFG N QLG+ + +
Sbjct: 298 --NTMR----LTAVQVSALTDVVAIAAAGRHSLALKSDGTVWAFGANEAGQLGDGTTTSR 351
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ P + L+ +A+G HSLAL ++G ++AFG + YG+LG +++
Sbjct: 352 NA-------PVQVSGLT--GVVAIAAGGAHSLALKADGTVWAFGANTYGQLGDGSLTAG- 401
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--------------- 377
T P + ++ D + +IA G S + ++G L+G G G +LG
Sbjct: 402 TVPVEM-AITD--VAAIAAGAEHSVLMKADGTLWGVGYSAGGRLGGASPSPRKLPMPVSG 458
Query: 378 ---------NGKEDDILNSEGKIYAFGRHDYGRLGLKNV---SEPVTEPTPIPSLQDKTI 425
G ++ G + FG + G+LG V S PV +PT + ++D
Sbjct: 459 VTTVATLKAGGDNTGVVRGNGAVLGFGYNHAGQLGNGGVLPSSVPV-QPTGLSGVRD--- 514
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+ G + ++G ++ +G+ + QLG L P+++
Sbjct: 515 --VGVGYNHTVVAKTDGTVWSYGLNSLGQLGVTAGASQLTPVQV 556
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 183/415 (44%), Gaps = 63/415 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV 133
+ G HTV EDG V+ G + G LG G S Q +L V ++AG +H+
Sbjct: 114 LAAGHAHTVVAREDGTVWGVGAAELGQLGVSLTGSSALPVQAGSL-TDVVCVTAGAAHTA 172
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVK-IASGADHFVMLTSRG 191
A+ DGT++ +G ++ G +GL + +P ++ ++SG+ +A+G H ++L + G
Sbjct: 173 AVRSDGTLWMYG--LNTFGQLGLGYASVSVWSPTQVGALSGVTADVAAGDLHTLVLKTDG 230
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFT----GVYNTF 246
+ G G LG T G V P++ + DV +++
Sbjct: 231 TVWGFGENGVGNLGDGTTT---------------GRVSPVQATGLTDVVDLAAGSLHSLA 275
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ S G++ AFG N QLG+ NT T + +L+D +A+ HSLAL
Sbjct: 276 LKSDGTVWAFGANFEGQLGDGT-------NTMRLTAVQVSALTD--VVAIAAAGRHSLAL 326
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
S+G ++AFG ++ G+LG + P + L + +IA G S A+ ++G ++
Sbjct: 327 KSDGTVWAFGANEAGQLG-DGTTTSRNAPVQVSGLTG--VVAIAAGGAHSLALKADGTVW 383
Query: 367 GWGMGNGYQLGNG-----------------------KEDDILNSEGKIYAFGRHDYGRLG 403
+G QLG+G + ++ ++G ++ G GRLG
Sbjct: 384 AFGANTYGQLGDGSLTAGTVPVEMAITDVAAIAAGAEHSVLMKADGTLWGVGYSAGGRLG 443
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ P P+P T+ ++ G + + G + G+G + QLGNG
Sbjct: 444 ---GASPSPRKLPMPVSGVTTVATLKAGGDNTGVVRGNGAVLGFGYNHAGQLGNG 495
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 140/314 (44%), Gaps = 25/314 (7%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
T+ KT G V + G GQLG+ + T V L + V VG ++ L DG
Sbjct: 522 TVVAKTDG-TVWSYGLNSLGQLGVTAGA-SQLTPVQVTALSDAKAVAVGYDFSLVLKTDG 579
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V+ +G N G LG S P V+ ++AG HS L DGTV+ +G
Sbjct: 580 TVWGFGSNTNGTLGDGTFVSSRATPAQVSGTVDITAVAAGRGHSALLKSDGTVWTFGG-- 637
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+++G +G + P++ ++G V +A+G H V+L G + G GQLG T
Sbjct: 638 NTYGQLGDGTTTSRYAPVQATGLTGAVAVAAGGRHTVVLKGDGTVWAFGGNASGQLGDGT 697
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
+ +R MS L ++ + G +T + S G++ A G N QLG+
Sbjct: 698 --TTTRLTAVQMSGL---------TNVVAIAVGEEHTVAVRSDGTVWAAGKNASGQLGDG 746
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ T P + +L+ +A+G+ H+LAL +G + ++G + G+L
Sbjct: 747 TVTDRL---TAVQVPGVTHALA------VAAGRGHTLALKIDGTLLSWGAGEQGQLREFG 797
Query: 328 VSEPVTEPTPIPSL 341
PV+ P P+L
Sbjct: 798 TGVPVSLPVNSPAL 811
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 61/321 (19%)
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+A+G H V+ G + G E GQLG +S +P++ +
Sbjct: 113 NLAAGHAHTVVAREDGTVWGVGAAELGQLG--------------VSLTGSSALPVQAGSL 158
Query: 236 DDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
DV + + S G++ +GLN + QLG + V ++P + +LS
Sbjct: 159 TDVVCVTAGAAHTAAVRSDGTLWMYGLNTFGQLGLGYASV------SVWSPTQVGALSGV 212
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ A+G H+L L ++G ++ FG + G LG + V+ P+ + + +A
Sbjct: 213 TADV-AAGDLHTLVLKTDGTVWGFGENGVGNLGDGTTTGRVS---PVQATGLTDVVDLAA 268
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G+ S A L S+G ++AFG + G+LG + +
Sbjct: 269 GSLHSLA--------------------------LKSDGTVWAFGANFEGQLGDGTNTMRL 302
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
T + +L D + +IA S A+ S+G ++ +G QLG+G P+++ G
Sbjct: 303 TA-VQVSALTD--VVAIAAAGRHSLALKSDGTVWAFGANEAGQLGDGTTTSRNAPVQVSG 359
Query: 472 KQLNNYTVLQVASGGQHSVIL 492
V+ +A+GG HS+ L
Sbjct: 360 LT----GVVAIAAGGAHSLAL 376
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 280 SHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 280 SHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 280 SHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ--LGRI 207
+GL G E + P ++S++ IV++A G H + L+ + G + GQ LG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLD 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPKLLKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 164/392 (41%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSL+D + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G L + + V ++ SGG S
Sbjct: 343 GNWLPYNGQCPPDIDYEDYFCVKRIFSGGDQS 374
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + Q +P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ ++ WG QLG G + K+ K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLL-KSLLGIPFMQVAAGGAHSF 203
Query: 491 IL 492
+L
Sbjct: 204 VL 205
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L + ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLADIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|238488141|ref|XP_002375308.1| pheromone response protein, putative [Aspergillus flavus NRRL3357]
gi|220697696|gb|EED54036.1| pheromone response protein, putative [Aspergillus flavus NRRL3357]
Length = 522
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 161/360 (44%), Gaps = 65/360 (18%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGR---------------------EAEGD----------- 108
+ LT D ++ TWG NDEG LGR E E D
Sbjct: 131 SAALTHDNRILTWGVNDEGTLGRDTKQEKKKGETGQDGANDVNGETESDQESDADDITLN 190
Query: 109 -SEFIPQTVN---LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI- 161
+E P VN PK V Q++A DS + AL DG VY WG+FR ++G +G E
Sbjct: 191 LNEATPSPVNPSLFPKGTVFAQLAASDSATFALTTDGLVYGWGTFRGANGGIGFAPESKK 250
Query: 162 -QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
Q+TP+++ +S +VK+A+GA H + LTS G + + GC EQ QLGR R ASR +
Sbjct: 251 EQRTPVQISVLSDVVKLAAGAQHVLALTSNGTVFSWGCDEQHQLGR---RRASRQHQ--S 305
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
L P + L I+D+ G Y++F + G++ A+G NN+ Q S F
Sbjct: 306 HPLVPDQCALP-SGIEDIGVGSYHSFALHRSGAVYAWGSNNFGQTAVPTSAGHHDATVAF 364
Query: 280 FTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT----- 333
P ++ K + G+ HS+A+ + G +GR D LG+ P++
Sbjct: 365 --PTEVRGFRKYGKMVSICGGKDHSIAITALGGCLTWGRIDNKALGMGTEDMPLSNIIHD 422
Query: 334 ---------EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+P + + D+ I + A + SF I G Y WG Q G D++
Sbjct: 423 GYGRPRILKQPHMLNGISDRIIFATAASDH-SFVITEAGKAYSWGFNVQSQAGQPGLDEV 481
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 26/255 (10%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLA 305
++S G++ ++G + QLG + Q + + S + D + G +HS A
Sbjct: 277 LTSNGTVFSWGCDEQHQLGRRRASRQHQSHPLVPDQCALPSGIED-----IGVGSYHSFA 331
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDK-TITSIACGNCVSFAID 360
L+ G +YA+G +++G+ + + V PT + + + SI G S AI
Sbjct: 332 LHRSGAVYAWGSNNFGQTAVPTSAGHHDATVAFPTEVRGFRKYGKMVSICGGKDHSIAIT 391
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHD-YGRLGLKNVSEPVTEPTPIPS 419
+ G WG + LG G ED L++ I HD YGR + + +P +
Sbjct: 392 ALGGCLTWGRIDNKALGMGTEDMPLSN---II----HDGYGRPRI------LKQPHMLNG 438
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
+ D+ I + A + SF I G Y WG Q G D++ P ++ K ++ +
Sbjct: 439 ISDRIIFATAASDH-SFVITEAGKAYSWGFNVQSQAGQPGLDEVERPTLLQSKYVDGKKL 497
Query: 480 LQVASGGQHSVILAK 494
+ A+GGQ S++ K
Sbjct: 498 VSAAAGGQFSIVTGK 512
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 24/200 (12%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIP----SLQDKTITSIACGNCVSFAIDSEGVLYG 367
+Y FG + YG LGL ++++ P+ + + + + G S A+ + +
Sbjct: 83 VYVFGTNCYGELGLGDLTKKSELVRPVLNQKLAAESVGVVHVTVGGVHSAALTHDNRILT 142
Query: 368 WGMGNGYQLGNGKEDDILNSE----------GKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
WG+ + LG + + E G+ + D + L N++E P+P+
Sbjct: 143 WGVNDEGTLGRDTKQEKKKGETGQDGANDVNGETESDQESDADDITL-NLNEAT--PSPV 199
Query: 418 -PSLQDK--TITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--LGNGKEDDILEPMKIEGK 472
PSL K +A + +FA+ ++G++YGWG G +G E + ++
Sbjct: 200 NPSLFPKGTVFAQLAASDSATFALTTDGLVYGWGTFRGANGGIGFAPESKKEQRTPVQIS 259
Query: 473 QLNNYTVLQVASGGQHSVIL 492
L++ V+++A+G QH + L
Sbjct: 260 VLSD--VVKLAAGAQHVLAL 277
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 192/433 (44%), Gaps = 87/433 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V+ G G+ GQLGLG D E++ ++V+ L+ NV VV G +++ + +DGK++TWG N
Sbjct: 7 VIAWGSGEDGQLGLGTD-EEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E P V K VQ + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLK------GEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G + G +++ P + + ++A+G H V+LT G + T G P G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPW--PPG 181
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNY 261
I Q S VP++ + +++V +N + G++ A+G N Y
Sbjct: 182 DIKQIS----------------VPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D++ + P ++ L D +A+G HS AL +EG++Y +GR ++G
Sbjct: 226 GQLGTGDTQPRS-------YPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 322 RLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG N P + L + I ++CG S A+
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL--------------------- 317
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDK------------TI 425
+G+I++FGR D+GRLG +P+ P IP + +
Sbjct: 318 -----TRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIA 372
Query: 426 TSIACGNCVSFAI 438
+ACG + AI
Sbjct: 373 KHVACGGRHTLAI 385
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 151/337 (44%), Gaps = 47/337 (13%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ S +++ G E GQLG T + + LEP ++ V G N+
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEE--KELASVVDALEP-------FNVRSVVGGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I G + +G N LG +S TP L+KSL++ K A G H LA
Sbjct: 52 AICDDGKLFTWGWNQRGTLGHPPETKTES------TPSLVKSLANVKIVQAAIGGWHCLA 105
Query: 306 LNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPS--LQDKTITSIACGNCVSFAI 359
++ +G+ YA+G ++YG+ G + PV IP Q T+ +A G S +
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVL 165
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFGRH 397
EG ++ WG + G+ K+ + L +G ++A+G +
Sbjct: 166 TREGYVWTWG--QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNN 223
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+YG+LG + ++P + P P+ L D T+ IA G S A+ +EG +YGWG G +LG
Sbjct: 224 EYGQLGTGD-TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF 282
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G D + + + L ++QV+ GG HSV L +
Sbjct: 283 GDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTR 319
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 188/427 (44%), Gaps = 64/427 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + + E L P + G +S+A+ +DG ++ WG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGW-- 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + TP ++S++ IV+ A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQRSAS-RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ + R RR + + L + + G ++ ++ +G + +G Q
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLTVRQV--AAGGTHSVVLTREGYVWTWG-----QP 177
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
Q S P ++ L + + ++A G H+LAL +G ++A+G ++YG+LG
Sbjct: 178 WPPGDIKQIS------VPVRVQGLENVR--LIAVGAFHNLALKEDGTLWAWGNNEYGQLG 229
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ ++P + P P+ L D T+ IA G S A
Sbjct: 230 TGD-TQPRSYPIPVQGLDDLTLVDIAAGGWHSTA-------------------------- 262
Query: 385 LNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L +EG++Y +GR ++GRLG N P + L + I ++CG S A+ +G
Sbjct: 263 LTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGR 322
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKI-------EGK-------QLNNYTVLQVASGGQHS 489
++ +G G+ +LG G++ +P+++ EG+ + VA GG+H+
Sbjct: 323 IFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHT 382
Query: 490 VILAKPK 496
+ + + K
Sbjct: 383 LAIVEWK 389
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K +L +++++V GG H+V LT DG++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRI 323
Query: 91 YTWGCNDEGALG 102
+++G D G LG
Sbjct: 324 FSFGRGDHGRLG 335
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 192/433 (44%), Gaps = 87/433 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V+ G G+ GQLGLG D E++ ++V+ L+ NV VV G +++ + +DGK++TWG N
Sbjct: 7 VIAWGSGEDGQLGLGTD-EEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E P V K VQ + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLK------GEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G + G +++ P + + ++A+G H V+LT G + T G P G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPW--PPG 181
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNY 261
I Q S VP++ + +++V +N + G++ A+G N Y
Sbjct: 182 DIKQIS----------------VPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D++ + P ++ L D +A+G HS AL +EG++Y +GR ++G
Sbjct: 226 GQLGTGDTQPRS-------YPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 322 RLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG N P + L + I ++CG S A+
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVAL--------------------- 317
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDK------------TI 425
+G+I++FGR D+GRLG +P+ P IP + +
Sbjct: 318 -----TRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIA 372
Query: 426 TSIACGNCVSFAI 438
+ACG + AI
Sbjct: 373 KHVACGGRHTLAI 385
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 151/337 (44%), Gaps = 47/337 (13%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ S +++ G E GQLG T + + LEP ++ V G N+
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEE--KELASVVDALEP-------FNVRSVVGGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I G + +G N LG +S TP L+KSL++ K A G H LA
Sbjct: 52 AICDDGKLFTWGWNQRGTLGHPPETKTES------TPSLVKSLANVKIVQAAIGAWHCLA 105
Query: 306 LNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPS--LQDKTITSIACGNCVSFAI 359
++ +G+ YA+G ++YG+ G + PV IP Q T+ +A G S +
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVL 165
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFGRH 397
EG ++ WG + G+ K+ + L +G ++A+G +
Sbjct: 166 TREGYVWTWG--QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNN 223
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+YG+LG + ++P + P P+ L D T+ IA G S A+ +EG +YGWG G +LG
Sbjct: 224 EYGQLGTGD-TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF 282
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G D + + + L ++QV+ GG HSV L +
Sbjct: 283 GDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTR 319
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 66/428 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + + E L P + G +S+A+ +DG ++ WG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGW-- 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + TP ++S++ IV+ A GA H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQRSAS-RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ + R RR + + L + + G ++ ++ +G + +G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLTVRQV--AAGGTHSVVLTREGYVWTWG------- 175
Query: 265 GEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ G+ + P ++ L + + ++A G H+LAL +G ++A+G ++YG+L
Sbjct: 176 -----QPWPPGDIKQISVPVRVQGLENVR--LIAVGAFHNLALKEDGTLWAWGNNEYGQL 228
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P + P P+ L D T+ IA G S A
Sbjct: 229 GTGD-TQPRSYPIPVQGLDDLTLVDIAAGGWHSTA------------------------- 262
Query: 384 ILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L +EG++Y +GR ++GRLG N P + L + I ++CG S A+ +G
Sbjct: 263 -LTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDG 321
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKI-------EGK-------QLNNYTVLQVASGGQH 488
++ +G G+ +LG G++ +P+++ EG+ + VA GG+H
Sbjct: 322 RIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRH 381
Query: 489 SVILAKPK 496
++ + + K
Sbjct: 382 TLAIVEWK 389
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K +L +++++V GG H+V LT DG++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRI 323
Query: 91 YTWGCNDEGALG 102
+++G D G LG
Sbjct: 324 FSFGRGDHGRLG 335
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 10 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 67
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 68 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 123
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 124 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 183
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 184 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 231
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 232 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 284
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 285 HNSTSHEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 339
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 167/395 (42%), Gaps = 65/395 (16%)
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLT 195
++ WG+ S+G +GL G E I P + + + + G H V + G + T
Sbjct: 9 SMLCWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYT 66
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSIL 254
GC + GQLG R V L ++I V G +T ++ KG +
Sbjct: 67 CGCNDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVY 115
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
A+GL++ QLG SE C P IKSLSD + +A G +HSLAL+ +++
Sbjct: 116 AWGLDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 169
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G++ YG+LGL + T P I SL +A G SF + G ++GWG
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 229
Query: 375 QLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVS 408
QLG E+D L EG ++ FG YG+LG + S
Sbjct: 230 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289
Query: 409 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
+ P + L +T +ACG S + S G +Y +G+G QLG G + P
Sbjct: 290 HEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 348
Query: 468 KIEGKQL-------------NNYTVLQVASGGQHS 489
++G + + V ++ SGG S
Sbjct: 349 TVKGNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 383
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 62 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 120
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 121 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 178
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 179 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 233
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 234 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 288
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 289 SHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 105/245 (42%), Gaps = 41/245 (16%)
Query: 252 SILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
S+L +G +Y QLG D E+ P +KK + G H++ + +
Sbjct: 9 SMLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 61
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G +Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 62 GTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA----------- 107
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
LN +G++YA+G G+LGL+ E + P I SL D I +A
Sbjct: 108 ---------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 152
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG S A+ ++ WG QLG G + P I K L +QVA+GG H
Sbjct: 153 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAH 210
Query: 489 SVILA 493
S +L
Sbjct: 211 SFVLT 215
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 10 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 60
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 61 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 99
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 100 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 157
Query: 489 SVILAK 494
S+ L+K
Sbjct: 158 SLALSK 163
>gi|342867548|gb|EGU72488.1| hypothetical protein FOXB_17003 [Fusarium oxysporum Fo5176]
Length = 337
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 129/268 (48%), Gaps = 47/268 (17%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNV-------VEVVVGGMHTVCLTEDG 88
V G+G +G+LGLG + K V+ DN+ V+V GGMH V LT D
Sbjct: 46 VYVFGEGSSGELGLGSRRIANKKPIDVKRPRLNDNLSASKVSAVQVSCGGMHVVALTHDN 105
Query: 89 KVYTWGCNDEGALGREAEGD------------------------SEFIPQTVNLPKKA-- 122
K+ TWG ND+GALGR+ D E P V+ A
Sbjct: 106 KILTWGVNDQGALGRDTSWDGGICDMDKSEGSYSEDEDDTGINPKESTPTAVSSEHFAPG 165
Query: 123 ---VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIA 178
VQ+ A DS + AL EDG VY WG+FR S G +G + +Q TPL L I +A
Sbjct: 166 TRFVQVVASDSATFALTEDGRVYGWGTFRSSEGILGFSETVRVQSTPLMLRDPKNIKALA 225
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G++H + L +GN+ GC +Q QLGR R MS L P V L R I +
Sbjct: 226 AGSNHILALDDKGNVFAWGCGQQNQLGRRIIE------RHKMSCLIPRGVCLPRGKISKI 279
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLG 265
G Y++F I + G + +GLNN+ Q+G
Sbjct: 280 ACGSYHSFAIDTDGQVYGWGLNNFGQVG 307
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 143/359 (39%), Gaps = 91/359 (25%)
Query: 141 VYAWGSFRDSHGSMGLKGEGI-QKTPLKLE----------SVSGIVKIASGADHFVMLTS 189
VY +G S G +GL I K P+ ++ S V+++ G H V LT
Sbjct: 46 VYVFGE--GSSGELGLGSRRIANKKPIDVKRPRLNDNLSASKVSAVQVSCGGMHVVALTH 103
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
+LT G +QG LGR D + G S
Sbjct: 104 DNKILTWGVNDQGALGR-----------------------------DTSWDGGICDMDKS 134
Query: 250 KGSILAFGLNNYSQLGEADSEV--QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+GS YS+ E D+ + ++S T + H +F + + + AL
Sbjct: 135 EGS--------YSE-DEDDTGINPKESTPTAVSSEHFAPGT---RFVQVVASDSATFALT 182
Query: 308 SEGKIYAFG--RHDYGRLGLKNVSEPV-TEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
+G++Y +G R G LG SE V + TP+ K I ++A G+ A+D +G
Sbjct: 183 EDGRVYGWGTFRSSEGILGF---SETVRVQSTPLMLRDPKNIKALAAGSNHILALDDKGN 239
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
++ WG G QLG RH L + V P +
Sbjct: 240 VFAWGCGQQNQLGR-------------RIIERHKMSCLIPRGVCLPRGK----------- 275
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKEDD--ILEPMKIEGKQLNNYT 478
I+ IACG+ SFAID++G +YGWG+ N Q+G N EDD IL P K+ N T
Sbjct: 276 ISKIACGSYHSFAIDTDGQVYGWGLNNFGQVGVESNAGEDDAVILRPAKLSYLNHNKIT 334
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 193/433 (44%), Gaps = 87/433 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
++ G G+ GQLG+G + E++ +VE L+ +V VV G +++ + +DG ++TWG N
Sbjct: 7 IIAWGSGEDGQLGIGTN-EEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG + E +E IP V K Q + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLK------GEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G + G +++ P + + ++A+G H V+LT G++ T G P G
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPW--PPG 181
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNY 261
I Q S VP++ + +++V +N + G +LA+G N Y
Sbjct: 182 DIKQIS----------------VPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D++ P ++ L D +A+G HS AL +G++Y +GR ++G
Sbjct: 226 GQLGTGDTQPTSH-------PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 278
Query: 322 RLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLGL N P + L ++ I ++CG S A+
Sbjct: 279 RLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL--------------------- 317
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDK------------TI 425
+G+I++FGR D+GRLG +P+ P IP + +
Sbjct: 318 -----TRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSA 372
Query: 426 TSIACGNCVSFAI 438
SIACG + AI
Sbjct: 373 KSIACGGRHTLAI 385
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 46/349 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G + T G G LG P+ + V+ L NV + +GG H + + + G+ Y WG
Sbjct: 57 GTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 95 CNDEGALGREAEGDSEFIP--QTVNLPKKAV------QISAGDSHSVALLEDGTVYAWGS 146
N+ G G E D P + + +PK+ Q++AG +HSV L +G V+ WG
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ P++++ + + IA GA H + L G LL G E GQLG
Sbjct: 177 PWPPGDIKQIS------VPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGT 230
Query: 207 -ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
TQ ++ +G+ L +D G ++T ++ KG + +G + +LG
Sbjct: 231 GDTQPTSHPVPVQGLDDL---------TLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D++ + P + L+++ ++ G HS+AL +G+I++FGR D+GRLG
Sbjct: 282 LGDND-----KSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336
Query: 326 KN---VSEPVTEPTPIPSLQDK------------TITSIACGNCVSFAI 359
+P+ P IP + + SIACG + AI
Sbjct: 337 GRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAI 385
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 150/332 (45%), Gaps = 47/332 (14%)
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSK 250
+++ G E GQLG T + LEP + V +G N+ I
Sbjct: 6 SIIAWGSGEDGQLGIGTNEEKEWACV--VEALEP-------YSVRSVVSGSRNSLAICDD 56
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++ +G N LG K+ N P +K+L++ K T A G H LA++ +G
Sbjct: 57 GTMFTWGWNQRGTLGHQPE--TKTENI----PSRVKALANVKITQAAIGGWHCLAVDDQG 110
Query: 311 KIYAFGRHDYGRLG---LKN-VSEPVTEPTPIPS--LQDKTITSIACGNCVSFAIDSEGV 364
+ YA+G ++YG+ G LK+ + PV IP T+ +A G S + EG
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGH 170
Query: 365 LYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFGRHDYGRL 402
++ WG + G+ K+ + L +G++ A+G ++YG+L
Sbjct: 171 VWTWG--QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQL 228
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G + ++P + P P+ L D T+ IA G S A+ +G +YGWG G +LG G D
Sbjct: 229 GTGD-TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDK 287
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ + + L ++QV+ GG HSV L +
Sbjct: 288 SSKMVPQKVNLLAEEDIIQVSCGGTHSVALTR 319
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 193/429 (44%), Gaps = 64/429 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ++G LG + E+ L P + +G +S+A+ +DGT++ WG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW-- 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G + E + P ++++++ I + A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 R-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ R RR + + L + + G ++ ++ +G + +G Q
Sbjct: 125 EEPLKDEMGRPVRRDIVIPKRCAPKLTVRQV--AAGGTHSVVLTREGHVWTWG-----QP 177
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
Q S P ++ L + + ++A G H+LAL +G++ A+G ++YG+LG
Sbjct: 178 WPPGDIKQIS------VPVRVQGLENVR--LIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ ++P + P P+ L D T+ IA G S A+ +G +YGW
Sbjct: 230 TGD-TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGW---------------- 272
Query: 385 LNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
GR ++GRLGL N P + L ++ I ++CG S A+ +G
Sbjct: 273 ----------GRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGR 322
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKI-------EG-------KQLNNYTVLQVASGGQHS 489
++ +G G+ +LG G++ +P+++ EG ++ ++ +A GG+H+
Sbjct: 323 IFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHT 382
Query: 490 VILAKPKPN 498
+ + + K +
Sbjct: 383 LAIVEWKSD 391
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 24/126 (19%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD-----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
T G V G+G+ G+LGLG + ++ +K L E +++++V GG H+V LT DG
Sbjct: 264 TDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAE--EDIIQVSCGGTHSVALTRDG 321
Query: 89 KVYTWGCNDEGALG---REAEGDSEFIPQTVNLPK--------------KAVQISAGDSH 131
+++++G D G LG + G +P + P+ A I+ G H
Sbjct: 322 RIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRH 381
Query: 132 SVALLE 137
++A++E
Sbjct: 382 TLAIVE 387
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 170/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 156/364 (42%), Gaps = 52/364 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL 474
G L
Sbjct: 343 GNWL 346
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 170/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 156/364 (42%), Gaps = 52/364 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL 474
G L
Sbjct: 343 GNWL 346
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ--LGRI 207
+GL G E + P ++S++ IV++A G H + L+ + G + GQ LG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLD 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQASPKLLKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 164/392 (41%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSL+D + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G L + + V ++ SGG S
Sbjct: 343 GNWLPYNGQCPPDIDYEDYFCVKRIFSGGDQS 374
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + Q +P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ ++ WG QLG G + K+ K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLL-KSLLGIPFMQVAAGGAHSF 203
Query: 491 IL 492
+L
Sbjct: 204 VL 205
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L + ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLADIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 164/320 (51%), Gaps = 38/320 (11%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV 133
V GG H++ LT D V+ WG N G LG + LP A Q+SAG+SHS+
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVA-QVSAGESHSL 133
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSR 190
AL +DG V+AWG +S G +G +TP++++ + S I +A+G +H + LTS
Sbjct: 134 ALTDDGRVFAWG--LNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSD 191
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNT 245
G + G GQLG + +S +P++ + + T V ++
Sbjct: 192 GRVFAWGKNSSGQLGNNSTVDSS--------------IPVQVQGLPANVTAVAAGGNHSL 237
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL-SDKKFTMLASGQHHSL 304
++S G I A+GLN+ QLG+ + TP L+ L + K +++G+ HSL
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSS-------TPVLVAGLPAGSKPVAVSAGKDHSL 290
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEG 363
AL +G +YA+G + YG+LG N + +E P + L + +T+++ G S A+ S+G
Sbjct: 291 ALMQDGTVYAWGGNSYGQLG--NGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALTSDG 346
Query: 364 VLYGWGMGNGYQLGNGKEDD 383
+Y WG+ + QLG+G +
Sbjct: 347 YVYAWGLNSSGQLGDGTTSN 366
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 22/289 (7%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V G GQLG G R+T + L +V +V G H++ LT+DG+V+ WG N
Sbjct: 91 VWAWGDNTNGQLGDG-TTTGRQTPTPAQGLPSVAQVSAGESHSLALTDDGRVFAWGLNSS 149
Query: 99 GALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG DS Q L + ++AG +HS+AL DG V+AWG ++S G +G
Sbjct: 150 GQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWG--KNSSGQLGN 207
Query: 157 KGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
P++++ + + + +A+G +H + LTS G + G GQLG T ++S
Sbjct: 208 NSTVDSSIPVQVQGLPANVTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTP 267
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
++ L G P+ D ++ + G++ A+G N+Y QLG +
Sbjct: 268 VL--VAGLPAGSKPVAVSAGKD-----HSLALMQDGTVYAWGGNSYGQLGNGTT------ 314
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
T P + L++ T +++G SLAL S+G +YA+G + G+LG
Sbjct: 315 -TASEMPVQVTGLAN--VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLG 360
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 58/332 (17%)
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V G +++G H ++LTS + G GQLG T + + +V
Sbjct: 68 AVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGT-TTGRQTPTPAQGLPSVAQVS 126
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE---ADSEVQKSGNTCFFTPHLIK 286
H + ++ G + A+GLN+ QLG+ ADS TP ++
Sbjct: 127 AGESH---------SLALTDDGRVFAWGLNSSGQLGDGTTADSR----------TPVQVQ 167
Query: 287 SL-SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L +D ++A+G +HSLAL S+G+++A+G++ G+LG N + + P + L
Sbjct: 168 GLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLG-NNSTVDSSIPVQVQGLP-AN 225
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+T++A G S A+ S+G +Y WG+ + QLG+G +
Sbjct: 226 VTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAG 285
Query: 384 -----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFA 437
L +G +YA+G + YG+LG N + +E P + L + +T+++ G S A
Sbjct: 286 KDHSLALMQDGTVYAWGGNSYGQLG--NGTTTASEMPVQVTGLAN--VTAVSAGGSDSLA 341
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+ S+G +Y WG+ + QLG+G + P+++
Sbjct: 342 LTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 30/284 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVV-GGMHTVCLTEDGKV 90
T G V G +GQLG G + +T V+ L D+ ++VV GG H++ LT DG+V
Sbjct: 136 TDDGRVFAWGLNSSGQLGDG-TTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRV 194
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+ WG N G LG + DS Q LP ++AG +HS+AL DG +YAWG +S
Sbjct: 195 FAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLALTSDGRIYAWG--LNS 252
Query: 151 HGSMGLKGEGIQKTPL---KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G TP+ L + S V +++G DH + L G + G GQLG
Sbjct: 253 SGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNG 312
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQ 263
T ++ E+P++ + +V G + ++S G + A+GLN+ Q
Sbjct: 313 TTTAS--------------EMPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQ 358
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
LG+ + + + F L+D + L+ G + +AL+
Sbjct: 359 LGDGTTSNRNTPVRVFSVLSTGALLTDLQ---LSDGSSNPIALS 399
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 33/226 (14%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+++G HSL L S+ ++A+G + G+LG + TP P+ ++ ++ G
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTG---RQTPTPAQGLPSVAQVSAGESH 131
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------ILNSE 388
S A+ +G ++ WG+ + QLG+G D L S+
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSD 191
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G+++A+G++ G+LG N + + P + L +T++A G S A+ S+G +Y WG
Sbjct: 192 GRVFAWGKNSSGQLG-NNSTVDSSIPVQVQGLP-ANVTAVAAGGNHSLALTSDGRIYAWG 249
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ + QLG+G + P+ + G + V V++G HS+ L +
Sbjct: 250 LNSSGQLGDGTTSNSSTPVLVAGLPAGSKPV-AVSAGKDHSLALMQ 294
>gi|442319025|ref|YP_007359046.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486667|gb|AGC43362.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 746
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 207/461 (44%), Gaps = 55/461 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVG-GMHTVCLTEDGKVYTWGC 95
G V + G G+LG G R T A V +L +V V G G +++ DG ++ WG
Sbjct: 65 GTVWSWGTNYGGELGDGTH-NHRSTPAQVPNLTSVTAVEAGRGNYSMARRADGSLWVWGY 123
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG + S + P V +S G HS+AL DGTV+AWG R++ G +G
Sbjct: 124 NTYGQLG-DGTTTSRWSPIPVPGFSGVSSVSGGYMHSMALKSDGTVWAWG--RNADGQLG 180
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSAS 213
+ +P++ +S + +++G D L + G + T G G+LG +T R
Sbjct: 181 DGSTTQRLSPVRALGLSLVTSVSAGYDFSAALKADGTVWTWGDNTDGELGNGTLTDR--- 237
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
L P +VP + + + + S G++ +G N++ LG + +
Sbjct: 238 ---------LTPAQVPGLTGVVFLMAGHSHVMAVKSDGTVWVWGRNDWGVLGLGEGAPIR 288
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
TP + +S F + SG+H+++AL ++G ++ +G ++YG+LG +
Sbjct: 289 Q-----LTPTQVPGISQVAF--VDSGEHYTVALKTDGTLWGWGYNNYGQLG-EGTGGVKY 340
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
PT +P L + ++ G + AI +G + WG+ + YQ N D
Sbjct: 341 LPTQLPGLTQ--VATLGVGRYHAMAIKQDGTAWAWGLHDAYQYANVTRPDSAVAVATQFT 398
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+L ++G ++ GR+ G+LG + ++ V P ++ S+A
Sbjct: 399 GALRPVGGLYETLVLKADGTVWGAGRNGSGQLGDGSGTQRV---VPAQAVGLTGAVSVAS 455
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
G + A S+G ++ WG QLG+G L P+++ G
Sbjct: 456 GANHALAAKSDGTVWAWGGNGSGQLGDGSTTASLIPIQVPG 496
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 219/486 (45%), Gaps = 67/486 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G G+LG G + +R T A V L VV ++ G H + + DG V+ WG N
Sbjct: 216 GTVWTWGDNTDGELGNG-TLTDRLTPAQVPGLTGVVFLMAGHSHVMAVKSDGTVWVWGRN 274
Query: 97 DEGALGR-EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
D G LG E + P V + + +G+ ++VAL DGT++ WG +++G +G
Sbjct: 275 DWGVLGLGEGAPIRQLTPTQVPGISQVAFVDSGEHYTVALKTDGTLWGWG--YNNYGQLG 332
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-RSASR 214
G++ P +L ++ + + G H + + G G + Q +T+ SA
Sbjct: 333 EGTGGVKYLPTQLPGLTQVATLGVGRYHAMAIKQDGTAWAWGLHDAYQYANVTRPDSAVA 392
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQK 273
A + L P G+Y T + + G++ G N QLG+
Sbjct: 393 VATQFTGALRP-------------VGGLYETLVLKADGTVWGAGRNGSGQLGDGS----- 434
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
T P L+ +ASG +H+LA S+G ++A+G + G+LG + + +
Sbjct: 435 --GTQRVVPAQAVGLTGA--VSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTTASLI 490
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK------------- 380
P +P L + ++A G+ S A+ S+G L+ WG + LG+G
Sbjct: 491 -PIQVPGLTG--VAAVAAGDGFSLALKSDGTLWAWGRNSSGSLGDGTTTGRTTPALVPNF 547
Query: 381 -----------EDDI--LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-IT 426
D + L + G ++A+G + YG+LG +V ++ P + T +
Sbjct: 548 TGVKAVATAPGADHVLALKTNGTLWAWGGNSYGQLGDGSVLRKLS-----PVFVNLTGVL 602
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
SIA G+ S + + G ++ WG + QLG+G P++++G + T L A+G
Sbjct: 603 SIATGSDHSLVVRTGGAVWTWGRNDAAQLGDGTGTTRTLPVQVQG--VTGATAL--AAGD 658
Query: 487 QHSVIL 492
+HS++L
Sbjct: 659 RHSLML 664
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 211/507 (41%), Gaps = 103/507 (20%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERK-TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G+ D G LGLG R+ T V + V V G +TV L DG ++ WG
Sbjct: 266 GTVWVWGRNDWGVLGLGEGAPIRQLTPTQVPGISQVAFVDSGEHYTVALKTDGTLWGWGY 325
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG---------- 145
N+ G LG E G +++P + + + G H++A+ +DGT +AWG
Sbjct: 326 NNYGQLG-EGTGGVKYLPTQLPGLTQVATLGVGRYHAMAIKQDGTAWAWGLHDAYQYANV 384
Query: 146 -------------------------------------SFRDSHGSMGLKGEGIQKT-PLK 167
+ R+ G +G G G Q+ P +
Sbjct: 385 TRPDSAVAVATQFTGALRPVGGLYETLVLKADGTVWGAGRNGSGQLG-DGSGTQRVVPAQ 443
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
++G V +ASGA+H + S G + G GQLG + ++ L P +
Sbjct: 444 AVGLTGAVSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTTAS----------LIPIQ 493
Query: 228 VPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
VP + V G ++ + S G++ A+G N+ LG+ + + + P L+
Sbjct: 494 VP-GLTGVAAVAAGDGFSLALKSDGTLWAWGRNSSGSLGDGTTTGRTT-------PALVP 545
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT- 345
+ + K A G H LAL + G ++A+G + YG+LG +V ++ P + T
Sbjct: 546 NFTGVKAVATAPGADHVLALKTNGTLWAWGGNSYGQLGDGSVLRKLS-----PVFVNLTG 600
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------------------------KE 381
+ SIA G+ S + + G ++ WG + QLG+G +
Sbjct: 601 VLSIATGSDHSLVVRTGGAVWTWGRNDAAQLGDGTGTTRTLPVQVQGVTGATALAAGDRH 660
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
+L S+G ++A+G + G LG ++ P P+ + +++ G S A+ +
Sbjct: 661 SLMLRSDGTLWAWGSNSEGELGDGTMTG---RPLPVRVRAPAGVVALSAGARHSLAMTPD 717
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMK 468
G ++ WG+ Q GN K P++
Sbjct: 718 GTVWAWGLNLFGQHGNNKWGFKTTPVQ 744
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 160/361 (44%), Gaps = 56/361 (15%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML-T 188
SH++ L DGTV++WG+ + G +G + TP ++ +++ + + +G ++ M
Sbjct: 56 SHTLWLKPDGTVWSWGT--NYGGELGDGTHNHRSTPAQVPNLTSVTAVEAGRGNYSMARR 113
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFI 247
+ G+L G GQLG T S P VP + V G +++ +
Sbjct: 114 ADGSLWVWGYNTYGQLGDGTT----------TSRWSPIPVP-GFSGVSSVSGGYMHSMAL 162
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G++ A+G N QLG+ + T +P +++L T +++G S AL
Sbjct: 163 KSDGTVWAWGRNADGQLGDGST-------TQRLSP--VRALGLSLVTSVSAGYDFSAALK 213
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
++G ++ +G + G LG +++ +T P +P L + + G+ A+ S+G ++
Sbjct: 214 ADGTVWTWGDNTDGELGNGTLTDRLT-PAQVPGLTG--VVFLMAGHSHVMAVKSDGTVWV 270
Query: 368 WGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDYGR 401
WG + LG G+ I L ++G ++ +G ++YG+
Sbjct: 271 WGRNDWGVLGLGEGAPIRQLTPTQVPGISQVAFVDSGEHYTVALKTDGTLWGWGYNNYGQ 330
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LG + PT +P L + ++ G + AI +G + WG+ + YQ N
Sbjct: 331 LG-EGTGGVKYLPTQLPGLTQ--VATLGVGRYHAMAIKQDGTAWAWGLHDAYQYANVTRP 387
Query: 462 D 462
D
Sbjct: 388 D 388
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GG V T G+ D QLG G R V+ + + G H++ L DG ++ WG
Sbjct: 617 GGAVWTWGRNDAAQLGDGTGT-TRTLPVQVQGVTGATALAAGDRHSLMLRSDGTLWAWGS 675
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N EG LG + +P V P V +SAG HS+A+ DGTV+AWG + G G
Sbjct: 676 NSEGELG-DGTMTGRPLPVRVRAPAGVVALSAGARHSLAMTPDGTVWAWG--LNLFGQHG 732
Query: 156 LKGEGIQKTPLK 167
G + TP++
Sbjct: 733 NNKWGFKTTPVQ 744
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
Q H+L L +G ++++G + G LG + P +P+L T GN S A
Sbjct: 55 QSHTLWLKPDGTVWSWGTNYGGELG-DGTHNHRSTPAQVPNLTSVTAVEAGRGNY-SMAR 112
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFG 395
++G L+ WG QLG+G L S+G ++A+G
Sbjct: 113 RADGSLWVWGYNTYGQLGDGTTTSRWSPIPVPGFSGVSSVSGGYMHSMALKSDGTVWAWG 172
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
R+ G+LG + ++ ++ P+ +L +TS++ G S A+ ++G ++ WG +L
Sbjct: 173 RNADGQLGDGSTTQRLS---PVRALGLSLVTSVSAGYDFSAALKADGTVWTWGDNTDGEL 229
Query: 456 GNGKEDDILEPMKIEG 471
GNG D L P ++ G
Sbjct: 230 GNGTLTDRLTPAQVPG 245
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 176/357 (49%), Gaps = 47/357 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G V +L + + G HTV L DG ++TWG N
Sbjct: 708 GTVWGWGYNGHGQLGTGTS-NSTSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYN 766
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG ++ + + P V+ +SAG++HS+AL DGTV+A+G + +G +G
Sbjct: 767 GYGQLGDDST-TTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFG--YNGYGQLGD 823
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRN 215
Q+TP++++ ++G+V IA+G D + L S G + + G G+LG T RS+
Sbjct: 824 GTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSS--- 880
Query: 216 ARRGMSFLEPGEVPLKRKHIDDV---FTGVYN-TFISSKGSILAFGLNNYSQLGEADSEV 271
VP++ + DV G Y+ + GS+ A+G N +LG + +
Sbjct: 881 ------------VPVQVALLTDVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTIS 928
Query: 272 Q----KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-K 326
Q +SG T IK +A+G +H+LAL S+G ++++G + YG+LG
Sbjct: 929 QSTPVQSGVTG------IKG--------IAAGPYHTLALKSDGTVWSWGYNGYGQLGSGN 974
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
N S V P IP L ++ SIA G S A ++G+LY WG QLGNG D
Sbjct: 975 NTSRSV--PAAIPGL--ASMASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 1027
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 184/403 (45%), Gaps = 65/403 (16%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
G HT+ + DG V+ WG N G LG + + +NL + I+ G++H+VAL
Sbjct: 698 GNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM-IAGGENHTVALRS 756
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
DGT++ WG + +G +G + +P+++ +++ +++G +H + L S G + G
Sbjct: 757 DGTLHTWG--YNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFG 814
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSI 253
GQLG T S P++ K + V ++ + S G++
Sbjct: 815 YNGYGQLGDGTTSSQ--------------RTPVQVKDLTGVVAIAAGKDFSLALKSDGTV 860
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N Y +LG + T P + L+D K +A+G +H +AL +G ++
Sbjct: 861 WSWGQNTYGELGNGTT-------TRSSVPVQVALLTDVK--AIAAGDYHGVALKKDGSVF 911
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
A+G + G LG S +++ TP+ S I IA G + A+ S+G ++ WG NG
Sbjct: 912 AWGYNGNGELGN---SSTISQSTPVQSGVTG-IKGIAAGPYHTLALKSDGTVWSWGY-NG 966
Query: 374 Y-QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
Y QLG+G N S V P IP L ++ SIA G
Sbjct: 967 YGQLGSG-------------------------NNTSRSV--PAAIPGL--ASMASIAAGE 997
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
S A ++G+LY WG QLGNG D P K+ G +N
Sbjct: 998 NQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGPNIN 1040
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
TL K+ G V + G GQLG G + R A + L ++ + G ++ DG
Sbjct: 950 TLALKSDG-TVWSWGYNGYGQLGSGNNT-SRSVPAAIPGLASMASIAAGENQSIAYGNDG 1007
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLED 138
+Y+WG N G LG D+ N+P K + I+ D+ + A + D
Sbjct: 1008 ILYSWGRNANGQLGNGTTVDT-------NVPHKVIGPNINPADTTAPAAVSD 1052
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 39/384 (10%)
Query: 13 AENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMER--KTFALVEDLDN 70
A +P +V + S G VV + G+G+ GQLG G D +R T D
Sbjct: 8 ATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQ 66
Query: 71 VVEVVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISA 127
+ + G HT+ +E ++Y+WG D G LG D IPQ + + + QI+
Sbjct: 67 IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDL-LIPQPIIALQGLRIKQIAC 125
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
GDSH +A+ +G V +WG R+ +G +GL P K+++ G I +A+GA+H V
Sbjct: 126 GDSHCLAVTMEGEVQSWG--RNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID-----DVFT 240
+T G L G G LG RN R +P K +D V
Sbjct: 184 AITENGELYGWGWGRYGNLGL-----GDRNDRW---------IPEKVSSVDCDKMVMVAC 229
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +T +SS G + +G + Y QLG + E P +++LSDK + ++ G
Sbjct: 230 GWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDS-------LVPQKLQALSDKLISQVSGG 282
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HS+AL S G +Y +G + +G++G+ + + + P + D+ + I+CG + A+
Sbjct: 283 WRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS-PVQVKFPHDQKVVQISCGWRHTIAV 341
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG+G D
Sbjct: 342 TEKENVFSWGRGTNGQLGHGDTVD 365
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 48/353 (13%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S ++ I++GA H V L S + + G E GQLG + R L L
Sbjct: 13 SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGH-----GDTDDR----LLPTHLSALD 63
Query: 232 RKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ ID + G +T + S+ + ++G ++ +LG +S + P I +L
Sbjct: 64 AQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNS-------SDLLIPQPIIALQ 116
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A G H LA+ EG++ ++GR+ G+LGL SE P I + Q I +
Sbjct: 117 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL-GTSEDSLVPQKIQTFQGVPIKMV 175
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------------- 383
A G S AI G LYGWG G LG G +D
Sbjct: 176 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTI 235
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
++S G +Y +G YG+LG N + + P + +L DK I+ ++ G S A+ S G+
Sbjct: 236 SVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTSTGL 294
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
LYGWG Q+G G D P+++ K ++ V+Q++ G +H++ + + +
Sbjct: 295 LYGWGWNKFGQVGVGDNVDRCSPVQV--KFPHDQKVVQISCGWRHTIAVTEKE 345
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 180/424 (42%), Gaps = 61/424 (14%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
ME + A V+ + G HTV L V +WG ++G LG + D +P +
Sbjct: 1 MELEVTAATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLG-HGDTDDRLLPTHL 59
Query: 117 NL--PKKAVQISAGDSHSVALLED-GTVYAWGSFRDSHGSMGLKGEG------IQKTPLK 167
+ ++ I+ G H++A E +Y+WG G G G G I + +
Sbjct: 60 SALDAQQIDSIACGADHTLAYSESRNELYSWG-----WGDFGRLGHGNSSDLLIPQPIIA 114
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
L+ + I +IA G H + +T G + + G + GQLG T S ++ +F
Sbjct: 115 LQGLR-IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSED-SLVPQKIQTFQ---G 169
Query: 228 VPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
VP+K V G ++ I+ G + +G Y LG D + + P +
Sbjct: 170 VPIKM-----VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDR-------WIPEKVS 217
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
S+ K M+A G H+++++S G +Y +G YG+LG N + + P + +L DK I
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLI 276
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ ++ G S A+ S G+LYGWG Q+G G D +
Sbjct: 277 SQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS-------------------- 316
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
P + D+ + I+CG + A+ + ++ WG G QLG+G D P
Sbjct: 317 -------PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369
Query: 467 MKIE 470
IE
Sbjct: 370 KIIE 373
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLHDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 YKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D N +F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDE------NDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 155/346 (44%), Gaps = 46/346 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYFPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG-- 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 325 -LKNVSEPVTE-----------PTPIPSLQDKTITSIACGNCVSFA 358
N P T PT I S + + I G SFA
Sbjct: 331 STSNRKSPFTVKGNWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFA 376
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP +K + + CG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCG------------------ 42
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ + +G +Y G +D G+LG + + +P + +L + I +++C
Sbjct: 43 --------LRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G HS
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLHDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++ AS + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 YKKQASPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D N +F P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDE------NDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 155/346 (44%), Gaps = 46/346 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYFPNLLK----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG-- 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 325 -LKNVSEPVTE-----------PTPIPSLQDKTITSIACGNCVSFA 358
N P T PT I S + + I G SFA
Sbjct: 331 STSNRKSPFTVKGNWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFA 376
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP +K + + CG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCG------------------ 42
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ + +G +Y G +D G+LG + + +P + +L + I +++C
Sbjct: 43 --------LRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G HS
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLT-EDGKVYT 92
G V+ + G+G+ GQLG G D +R ++ D + V+ G HT + E+ +VY+
Sbjct: 39 GNVLCSWGRGEDGQLGHG-DAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYS 97
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D G LG D F PQ V + K Q++ GDSH +A+ G V +WG R+
Sbjct: 98 WGWGDFGRLGHGNSSDV-FTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWG--RNQ 154
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +GL P K+++ GI IA+GA+H +T G+L G G LG
Sbjct: 155 NGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL-- 212
Query: 209 QRSASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
RN R P +V L + + + + G +T +SS G + +G + Y QLG
Sbjct: 213 ---GDRNDR-----FVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGH 264
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
D E PH +++L D + ++ G H++AL S+GK+Y +G + +G++G
Sbjct: 265 GDFEDH-------LFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAG 317
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+ + + P + ++ + +ACG + A + ++ WG G QLG+G+
Sbjct: 318 DSVDHCS-PVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGE 370
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 173/416 (41%), Gaps = 73/416 (17%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTV---NLPKKAVQI 125
VV V G H+V L E + +WG ++G LG GD+E +P + + P+ I
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGH---GDAEDRLVPTVISGFDAPRITSVI 79
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IVKIASG 180
D + E+ VY+WG G G G G TP + ++ G I ++A G
Sbjct: 80 CGADHTTAYSEEEQQVYSWG-----WGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACG 134
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H + +T G + + G + GQL G+ E +P K + + +
Sbjct: 135 DSHCLAVTMGGEVQSWGRNQNGQL--------------GLGTTEDSLLPQKIQAFEGICV 180
Query: 241 GV------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
+ + ++ G + +G Y LG D + F P + + +K
Sbjct: 181 KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-------FVPEKVSLVEGEKMV 233
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
++A G H++ ++S G +Y +G YG+LG + + + P + +L+D + + I+ G
Sbjct: 234 LIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKVEALKDSSTSQISGGWR 292
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
+ A+ S+G LYGWG Q+G G D + P
Sbjct: 293 HTMALTSDGKLYGWGWNKFGQVGAGDSVDHCS---------------------------P 325
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+ ++ + +ACG + A + ++ WG G QLG+G+ D +P+ I+
Sbjct: 326 VQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMID 381
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
++++G HS+AL + ++GR + G+LG + + + PT I ITS+ CG
Sbjct: 25 LVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGFDAPRITSVICGAD 83
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
+ A E E ++Y++G D+GRLG N S+ T P
Sbjct: 84 HTTAYSEE-------------------------EQQVYSWGWGDFGRLGHGNSSDVFT-P 117
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
P+ +LQ I +ACG+ A+ G + WG QLG G +D L P KI+
Sbjct: 118 QPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQA--F 175
Query: 475 NNYTVLQVASGGQHSVILAK 494
V +A+G +H+ + +
Sbjct: 176 EGICVKMIAAGAEHTAAVTE 195
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 24/244 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T GG V + G+ GQLGLG D + + E + V + G HT +TEDG +Y
Sbjct: 142 TMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGI-CVKMIAAGAEHTAAVTEDGDLY 200
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG G LG D F+P+ V+L +K V I+ G H++ + G +Y +G +
Sbjct: 201 GWGWGRYGNLGLGDRND-RFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK- 258
Query: 150 SHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G P K+E++ S +I+ G H + LTS G L G + GQ+G
Sbjct: 259 -YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG-- 315
Query: 208 TQRSASRNARRGMSFLEPGEV--PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
A + P +V P ++K + V G +T + K ++ A+G QL
Sbjct: 316 --------AGDSVDHCSPVQVMFPAEQK-VAQVACGWRHTLAYTEKKNVFAWGRGTSGQL 366
Query: 265 GEAD 268
G +
Sbjct: 367 GHGE 370
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 174/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---R 206
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLD 174
Query: 207 ITQRSASRNARR--GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
++++ + + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CKKQTSPQLIKSLVGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLI--KSLVGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 178/385 (46%), Gaps = 41/385 (10%)
Query: 13 AENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMER--KTFALVEDLDN 70
A +P +V + S G VV + G+G+ GQLG G D +R T D
Sbjct: 8 ATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQ 66
Query: 71 VVEVVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISA 127
+ + G HT+ +E ++Y+WG D G LG D IPQ + + + QI+
Sbjct: 67 IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSD-LLIPQPIIALQGLRIKQIAC 125
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
GDSH +A+ +G V +WG R+ +G +GL P K+++ G I +A+GA+H V
Sbjct: 126 GDSHCLAVTMEGEVQSWG--RNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID-----DVFT 240
+T G L G G LG RN R +P K +D V
Sbjct: 184 AITENGELYGWGWGRYGNLGL-----GDRNDRW---------IPEKVSSVDCDKMVMVAC 229
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +T +SS G + +G + Y QLG + E P +++LSDK + ++ G
Sbjct: 230 GWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDS-------LVPQKLQALSDKLISQVSGG 282
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
HS+AL S G +Y +G + +G++G+ NV P + D+ + I+CG + A
Sbjct: 283 WRHSMALTSTGLLYGWGWNKFGQVGVGDNVDR--CSPVQVKFPHDQKVVQISCGWRHTIA 340
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + ++ WG G QLG+G D
Sbjct: 341 VTEKENVFSWGRGTNGQLGHGDTVD 365
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 48/353 (13%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S ++ I++GA H V L S + + G E GQLG + R L L
Sbjct: 13 SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGH-----GDTDDR----LLPTHLSALD 63
Query: 232 RKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ ID + G +T + S+ + ++G ++ +LG +S + P I +L
Sbjct: 64 AQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNS-------SDLLIPQPIIALQ 116
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A G H LA+ EG++ ++GR+ G+LGL SE P I + Q I +
Sbjct: 117 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL-GTSEDSLVPQKIQTFQGVPIKMV 175
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------------- 383
A G S AI G LYGWG G LG G +D
Sbjct: 176 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTI 235
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
++S G +Y +G YG+LG N + + P + +L DK I+ ++ G S A+ S G+
Sbjct: 236 SVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTSTGL 294
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
LYGWG Q+G G D P+++ K ++ V+Q++ G +H++ + + +
Sbjct: 295 LYGWGWNKFGQVGVGDNVDRCSPVQV--KFPHDQKVVQISCGWRHTIAVTEKE 345
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 180/424 (42%), Gaps = 61/424 (14%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
ME + A V+ + G HTV L V +WG ++G LG + D +P +
Sbjct: 1 MELEVTAATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLG-HGDTDDRLLPTHL 59
Query: 117 NL--PKKAVQISAGDSHSVALLED-GTVYAWGSFRDSHGSMGLKGEG------IQKTPLK 167
+ ++ I+ G H++A E +Y+WG G G G G I + +
Sbjct: 60 SALDAQQIDSIACGADHTLAYSESRNELYSWG-----WGDFGRLGHGNSSDLLIPQPIIA 114
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
L+ + I +IA G H + +T G + + G + GQLG T S ++ +F
Sbjct: 115 LQGLR-IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSED-SLVPQKIQTFQ---G 169
Query: 228 VPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
VP+K V G ++ I+ G + +G Y LG D + + P +
Sbjct: 170 VPIKM-----VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDR-------WIPEKVS 217
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
S+ K M+A G H+++++S G +Y +G YG+LG N + + P + +L DK I
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLI 276
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ ++ G S A+ S G+LYGWG Q+G G D +
Sbjct: 277 SQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS-------------------- 316
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
P + D+ + I+CG + A+ + ++ WG G QLG+G D P
Sbjct: 317 -------PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369
Query: 467 MKIE 470
IE
Sbjct: 370 KIIE 373
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV+++ G H + L+ + + G + GQLG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGID 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 156/361 (43%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + ++ G +HSLAL+ +++++G+
Sbjct: 110 LDSDGQLGLLGSE------ECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 142/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ+S G HS+AL + V++WG ++ +G +
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWG--QNKYGQL 169
Query: 155 GLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 278 STSHE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I ++C
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 29/375 (7%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NV 71
E P Q V + S G +V + G+G+ GQLG G D +R ++ D V
Sbjct: 17 EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHG-DSEDRPVPTVLTSFDVPRV 75
Query: 72 VEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
V+ G HT+ ++D ++Y+WG D G LG D F PQ + + K QI+ G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV-FNPQPIVALQGMKIKQIACG 134
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVM 186
DSH + + +G V++WG R+ +G +GL P K+++ G+ IA+GA+H
Sbjct: 135 DSHCLTVTFNGQVHSWG--RNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTA 192
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+T G+L G G LG ++ R R+ +S +E ++ L V G ++
Sbjct: 193 ITEGGDLYGWGWGRYGNLG-LSDRD-DRSVPEKVSSVEGEKMVL-------VACGWRHSV 243
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+SS G++ +G + Y QLG D + P +++L D + ++ G H++A
Sbjct: 244 SVSSSGALYTYGWSKYGQLGHGDFQDH-------LVPRKLEALKDVPISQISGGWRHTMA 296
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ +GK+Y +G + +G++G+++ + + P + ++ I +ACG + A+ +
Sbjct: 297 VAEDGKLYGWGWNKFGQVGVEDNVDHCS-PVEVNFPDEQKIVQVACGWRHTLALTENKNI 355
Query: 366 YGWGMGNGYQLGNGK 380
+ WG G QLG+G+
Sbjct: 356 FSWGRGASGQLGHGE 370
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 176/412 (42%), Gaps = 55/412 (13%)
Query: 104 EAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
EA GD E +P+ P+++V ISAG +HS ALL V +WG R G +G +
Sbjct: 8 EAAGD-EAVPEA---PEQSVILISAGANHSAALLSGQMVCSWG--RGEDGQLGHGDSEDR 61
Query: 163 KTPLKLES--VSGIVKIASGADHFVMLTS-RGNLLTAGCPEQGQLGRITQRSASRNARRG 219
P L S V + + GADH + + L + G + G+LG
Sbjct: 62 PVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV------- 114
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
F V L+ I + G + ++ G + ++G N QLG + N
Sbjct: 115 --FNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGN-------NQD 165
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P IK+ M+A+G H+ A+ G +Y +G YG LGL + + + P +
Sbjct: 166 SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSD-RDDRSVPEKV 224
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------- 385
S++ + + +ACG S ++ S G LY +G QLG+G D L
Sbjct: 225 SSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPI 284
Query: 386 -------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
+GK+Y +G + +G++G+++ + + P + ++ I +ACG
Sbjct: 285 SQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCS-PVEVNFPDEQKIVQVACGW 343
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
+ A+ ++ WG G QLG+G+ D P I+ L+ Q+ S
Sbjct: 344 RHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLES 395
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 154/351 (43%), Gaps = 48/351 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ I++GA+H L S + + G E GQLG R + L +VP
Sbjct: 23 VILISAGANHSAALLSGQMVCSWGRGEDGQLGH-----GDSEDRPVPTVLTSFDVP---- 73
Query: 234 HIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ V G +T S + ++G ++ +LG +S + F P I +L
Sbjct: 74 RVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNS-------SDVFNPQPIVALQGM 126
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K +A G H L + G+++++GR+ G+LGL N + + P I + + + IA
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL-PQKIKAFEGVCVKMIAA 185
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + AI G LYGWG G LG DD +
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV 245
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+S G +Y +G YG+LG + + + P + +L+D I+ I+ G + A+ +G LY
Sbjct: 246 SSSGALYTYGWSKYGQLGHGDFQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLY 304
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
GWG Q+G ED++ +E + ++QVA G +H++ L + K
Sbjct: 305 GWGWNKFGQVG--VEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENK 353
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++ ++++G +HS AL S + ++GR + G+LG + SE PT + S +TS+
Sbjct: 20 EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGD-SEDRPVPTVLTSFDVPRVTSV 78
Query: 350 ACGNCVSFAI-DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
CG + A D E LY WG G D+GRLG N S
Sbjct: 79 ICGADHTIAYSDDEMQLYSWGWG--------------------------DFGRLGHGNSS 112
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ V P PI +LQ I IACG+ + G ++ WG QLG G D L P K
Sbjct: 113 D-VFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQK 171
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAK 494
I K V +A+G +H+ + +
Sbjct: 172 I--KAFEGVCVKMIAAGAEHTTAITE 195
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 190/419 (45%), Gaps = 76/419 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
++ G G+ GQLG+G + E++ +V L+ V VV G +++ + +DGK++TWG N
Sbjct: 7 LIAWGAGEDGQLGIGIN-EEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG AE +E IP V VQ + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLKGEGIQKT----------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G + E T P + + ++A+G H V+LT G++ T G P
Sbjct: 124 GEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPW--PP 181
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNN 260
G I Q S VP++ + ++ V +N + G++ A+G N
Sbjct: 182 GDIKQIS----------------VPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNE 225
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y QLG D++ + P ++ LS +A+G HS AL +G++Y +GR ++
Sbjct: 226 YGQLGTGDTQPRSQ-------PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 278
Query: 321 GRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
GRLG N P + L + I ++CG S A+ +G
Sbjct: 279 GRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDG---------------- 322
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGL-KNVS--EPVTEPTPIPSLQDKTITSIACGNCVS 435
++++FGR D+GRLG K V+ +PV PT IP + + T A G+ ++
Sbjct: 323 ----------RMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIA 371
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 77/433 (17%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ++G LG + E++ L P K + AG +S+A+ +DG ++ WG
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWG--W 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + P ++++++ IV+ A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+R + RR + + L + + G ++ ++ +G + +G
Sbjct: 125 EEPERKDDTGKTLRRDIVIPQRCAPKLVVRQV--AAGGTHSVVLTREGHVWTWGQP---- 178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSD-------KKFTMLASGQHHSLALNSEGKIYAFG 316
+ P IK +S +K ++A G H+LAL +G ++A+G
Sbjct: 179 ----------------WPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWG 222
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++YG+LG + ++P ++P P+ L T+ IA G S A+ +G +YGW
Sbjct: 223 NNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGW-------- 273
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
GR ++GRLG N P + L + I ++CG S
Sbjct: 274 ------------------GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHS 315
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKE----------DDILEPMKIEGKQ--LNNYTVLQVA 483
A+ +G ++ +G G+ +LG GK+ DI P + G + ++ VA
Sbjct: 316 VALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVA 375
Query: 484 SGGQHSVILAKPK 496
GG+H++ + + K
Sbjct: 376 CGGRHTLAIVEWK 388
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 50/339 (14%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ + +L+ G E GQLG + + ++ LEP +V V G N+
Sbjct: 1 MATHTSLIAWGAGEDGQLG--IGINEEKEWVCVVNALEPYKV-------RSVVAGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
I G + +G N LG A+++ + P +K+L++ A G H L
Sbjct: 52 AICDDGKLFTWGWNQRGTLGHPAETKTEN-------IPSQVKALNNVNIVQAAIGGWHCL 104
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT-------PIPSLQDKTITSIACGNCVSF 357
A++ +G+ YA+G ++YG+ G + + T T P + +A G S
Sbjct: 105 AVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSV 164
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFG 395
+ EG ++ WG + G+ K+ + L +G ++A+G
Sbjct: 165 VLTREGHVWTWG--QPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWG 222
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
++YG+LG + ++P ++P P+ L T+ IA G S A+ +G +YGWG G +L
Sbjct: 223 NNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 281
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G G D + + + L ++Q++ GG HSV L +
Sbjct: 282 GFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQ 320
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K +L +++V++ GG H+V LT+DG++
Sbjct: 265 TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRM 324
Query: 91 YTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
+++G D G LG + G +P + PK + H +A L
Sbjct: 325 FSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKL 373
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 29/375 (7%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NV 71
E P Q V + S G +V + G+G+ GQLG G D +R ++ D V
Sbjct: 17 EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHG-DSEDRPVPTVLTSFDVPRV 75
Query: 72 VEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
V+ G HT+ ++D ++Y+WG D G LG D F PQ + + K QI+ G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV-FNPQPIVALQGMKIKQIACG 134
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVM 186
DSH + + +G V++WG R+ +G +GL P K+++ G+ IA+GA+H
Sbjct: 135 DSHCLTVTFNGQVHSWG--RNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTA 192
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+T G+L G G LG ++ R R+ +S +E ++ L V G ++
Sbjct: 193 ITEGGDLYGWGWGRYGNLG-LSDRD-DRSVPEKVSSVEGEKMVL-------VACGWRHSV 243
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+SS G++ +G + Y QLG D + P +++L D + ++ G H++A
Sbjct: 244 SVSSSGALYTYGWSKYGQLGHGDFQDH-------LVPRKLEALKDVPISQISGGWRHTMA 296
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ +GK+Y +G + +G++G+++ + + P + ++ I +ACG + A+ +
Sbjct: 297 VAEDGKLYGWGWNKFGQVGVEDNVDHCS-PVEVNFPDEQKIVQVACGWRHTLALTENKNI 355
Query: 366 YGWGMGNGYQLGNGK 380
+ WG G QLG+G+
Sbjct: 356 FSWGRGASGQLGHGE 370
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 176/412 (42%), Gaps = 55/412 (13%)
Query: 104 EAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
EA GD E +P+ P+++V ISAG +HS ALL V +WG R G +G +
Sbjct: 8 EAAGD-EAVPEA---PEQSVILISAGANHSAALLSGQMVCSWG--RGEDGQLGHGDSEDR 61
Query: 163 KTPLKLES--VSGIVKIASGADHFVMLTS-RGNLLTAGCPEQGQLGRITQRSASRNARRG 219
P L S V + + GADH + + L + G + G+LG
Sbjct: 62 PVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV------- 114
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
F V L+ I + G + ++ G + ++G N QLG + N
Sbjct: 115 --FNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGN-------NQD 165
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P IK+ M+A+G H+ A+ G +Y +G YG LGL + + + P +
Sbjct: 166 SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSD-RDDRSVPEKV 224
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------- 385
S++ + + +ACG S ++ S G LY +G QLG+G D L
Sbjct: 225 SSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPI 284
Query: 386 -------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
+GK+Y +G + +G++G+++ + + P + ++ I +ACG
Sbjct: 285 SQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCS-PVEVNFPDEQKIVQVACGW 343
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
+ A+ ++ WG G QLG+G+ D P I+ L+ Q+ S
Sbjct: 344 RHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLES 395
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 154/351 (43%), Gaps = 48/351 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ I++GA+H L S + + G E GQLG R + L +VP
Sbjct: 23 VILISAGANHSAALLSGQMVCSWGRGEDGQLGH-----GDSEDRPVPTVLTSFDVP---- 73
Query: 234 HIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ V G +T S + ++G ++ +LG +S + F P I +L
Sbjct: 74 RVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNS-------SDVFNPQPIVALQGM 126
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K +A G H L + G+++++GR+ G+LGL N + + P I + + + IA
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL-PQKIKAFEGVCVKMIAA 185
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + AI G LYGWG G LG DD +
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV 245
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+S G +Y +G YG+LG + + + P + +L+D I+ I+ G + A+ +G LY
Sbjct: 246 SSSGALYTYGWSKYGQLGHGDFQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLY 304
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
GWG Q+G ED++ +E + ++QVA G +H++ L + K
Sbjct: 305 GWGWNKFGQVG--VEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENK 353
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++ ++++G +HS AL S + ++GR + G+LG + SE PT + S +TS+
Sbjct: 20 EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGD-SEDRPVPTVLTSFDVPRVTSV 78
Query: 350 ACGNCVSFAI-DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
CG + A D E LY WG G D+GRLG N S
Sbjct: 79 ICGADHTIAYSDDEMQLYSWGWG--------------------------DFGRLGHGNSS 112
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ V P PI +LQ I IACG+ + G ++ WG QLG G D L P K
Sbjct: 113 D-VFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQK 171
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAK 494
I K V +A+G +H+ + +
Sbjct: 172 I--KAFEGVCVKMIAAGAEHTTAITE 195
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 48/363 (13%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFA-LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
VL G G+ GQLG+G + E K +A VE L + V VV G +++ + EDG+++TWG
Sbjct: 9 AVLAWGSGEDGQLGMGGN--EEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWG 66
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF----- 147
N G LG + +E P V+ K VQ + G H +A+ ++G YAWG
Sbjct: 67 WNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQC 126
Query: 148 -----RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R G+ L+ + TP + + ++A+G H V+LT G++ T G P
Sbjct: 127 GEEPERKEDGTRALRRD--IPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWP- 183
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGL 258
G I Q S P++ + ++ V +N ++ G + A+G
Sbjct: 184 -PGDIKQIS----------------TPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGN 226
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N Y QLG D++ + P ++ LSD +A+G HS AL +G++YA+GR
Sbjct: 227 NEYGQLGTGDTQPRSH-------PIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRG 279
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
++GRLG + P + L + I ++CG S A+ +G ++ +G G+ +LG
Sbjct: 280 EHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY 339
Query: 379 GKE 381
G++
Sbjct: 340 GRK 342
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 188/418 (44%), Gaps = 59/418 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + ++ L AV + AG +S+A+ EDG ++ WG
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGW-- 67
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G + + +P + +++G IV+ A G H + + G+ G E GQ G
Sbjct: 68 NQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCG 127
Query: 206 RITQRS--ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+R +R RR + + LK + + G ++ ++ +G + +G
Sbjct: 128 EEPERKEDGTRALRRDIPTPQRCAPKLKVRQV--AAGGTHSVVLTQEGHVWTWGQP---- 181
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
++++ TP ++ L +K ++A G H+LAL +G ++A+G ++YG+L
Sbjct: 182 --WPPGDIKQ-----ISTPVRVQGL--EKVRVIAVGAFHNLALTEDGILWAWGNNEYGQL 232
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P + P + L D ++ IA G S A
Sbjct: 233 GTGD-TQPRSHPIRVEGLSDLSLVDIAAGGWHSTA------------------------- 266
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L +G++YA+GR ++GRLG + P + L + I ++CG S A+ +G
Sbjct: 267 -LTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGR 325
Query: 444 LYGWGMGNGYQLGNGKE---------DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
++ +G G+ +LG G++ D L P K + + VA GG+H++ +
Sbjct: 326 MFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAI 383
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 156/362 (43%), Gaps = 55/362 (15%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
V AWGS D G +G+ G + +E++ + + +G+ + + + G L T G
Sbjct: 9 AVLAWGSGED--GQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWG 66
Query: 198 CPEQGQLGRI--TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
++G LG T+ +S ++ L K + G + + G A
Sbjct: 67 WNQRGTLGHPPKTKTESSPGPVHALAGL---------KIVQAAIGGWHCLAVDDNGHAYA 117
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFF--TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G N Y Q GE + E ++ G P + K +A+G HS+ L EG ++
Sbjct: 118 WGGNEYGQCGE-EPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVW 176
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G+ + +K +S PV + L+ + IA G + A+ +G+L+ WG
Sbjct: 177 TWGQ-PWPPGDIKQISTPVR----VQGLEK--VRVIAVGAFHNLALTEDGILWAWG---- 225
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
++YG+LG + ++P + P + L D ++ IA G
Sbjct: 226 ----------------------NNEYGQLGTGD-TQPRSHPIRVEGLSDLSLVDIAAGGW 262
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S A+ +G +Y WG G +LG G + + P+K+E L ++QV+ GG HSV L
Sbjct: 263 HSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKVE--LLAGEDIVQVSCGGTHSVAL 320
Query: 493 AK 494
+
Sbjct: 321 TR 322
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D R VE L +++V+V GG H+V LT DG+++++G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYG 330
Query: 95 CNDEGALG 102
D G LG
Sbjct: 331 RGDHGRLG 338
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 203/465 (43%), Gaps = 100/465 (21%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V +CGQ G+LG G D RK+F ++ L ++++ G HTV LT DGKV+T G N
Sbjct: 375 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G G+ G+ R SH
Sbjct: 434 DNGQCGQG----------------------------------------GTARVSH----- 448
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASR 214
+ + P K++S S +G +H +++++ G + T G +GQLG T S +
Sbjct: 449 ----LSEIP-KMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPK 503
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG----SILAFGLNNYSQLGEADSE 270
R L+ K + V Y+T ++ + ++ FG N+Y QLG DS
Sbjct: 504 IIR-----------SLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSI 552
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+K P +++LSD++ +A GQ+H++ + GK +AFG++DYG+LG+ +
Sbjct: 553 DRK-------IPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMEN 605
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK 390
+ L+ + I CG + A+ S L+ +G + QLG G+ + S +
Sbjct: 606 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 665
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+ R RL I L+ K I IACG + A+ GV+Y +G
Sbjct: 666 LQQ-QRFSNARL--------------IDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRN 710
Query: 451 NGYQLGNGKEDDILEPMKIE---GKQLNNYTVLQVASGGQHSVIL 492
N QLG G + + P I+ GK+ + VA+G H+V+L
Sbjct: 711 NHGQLGTGDTTERVYPFPIDDFVGKR-----IALVAAGFYHTVVL 750
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 27/334 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T G V TCG D GQ G G V ++ + G HT+ ++ DG+V
Sbjct: 422 TADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVA 481
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSF-R 148
T G N G LG SE +P+ + +L K V+ +S H+V EDG + +F R
Sbjct: 482 TCGYNYRGQLG-HGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 540
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ +G +G +K P +E++S IV +A G H +++T G G + GQLG
Sbjct: 541 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGI 600
Query: 207 ITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
T + L P +V L+R+ ++ G Y+T + S + AFG N+Y Q
Sbjct: 601 DTMENQ----------LAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQ 650
Query: 264 LGEADSEVQKSGN-----TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
LG S + N F LI L K +A G +H++A++ G +Y FGR+
Sbjct: 651 LGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRN 710
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
++G+LG + +E V P PI K I +A G
Sbjct: 711 NHGQLGTGDTTERVY-PFPIDDFVGKRIALVAAG 743
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 205/479 (42%), Gaps = 114/479 (23%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKV 90
K G V G GD G+LGL + + L L++ V GG HT+ LT+ G+V
Sbjct: 24 KAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGAHTLILTDKGRV 82
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+ G N G LG + +S F P V+ P V I+AG HS A+ G Y WG R+
Sbjct: 83 FATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWG--RN 140
Query: 150 SHGSMGL--KGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
S G +GL + + + TP K+ES++G + +A G DH + L G +L+ G G LG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLG 200
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
GE+ TG ++ F + N Y
Sbjct: 201 H-------------------GEM-----------TGFFDFFKDT---------NEY---- 217
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
TP +I L + +++G HS + G IY+FG+ +LGL
Sbjct: 218 ---------------TPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGL 262
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
N ++ ++P PIP L ++SI+CG GY G +
Sbjct: 263 GNNND-ASQPCPIPDL--PRVSSISCG--------------------GYHTG------AI 293
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+G IY +G +++G LG + ++P + SL + ++ I+CG + AI S+G ++
Sbjct: 294 TQDGDIYTWGSNEHGCLG--SGFRASSKPLRLESLAEAFMSEISCGWKHTAAI-SDGYIF 350
Query: 446 GWGMGNGY------------QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG G Y QLG G + D EP+ IE + + L V+ G H+ +
Sbjct: 351 SWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIE--MDDRLSALHVSCGFNHTAAI 407
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + + GQG QLGLG + + + DL V + GG HT +T+DG +Y
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNN-NDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIY 300
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
TWG N+ G LG S+ + +IS G H+ A + DG +++WG + S+
Sbjct: 301 TWGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAA-ISDGYIFSWG-WGGSY 358
Query: 152 GSMGLKGEG-------------IQKTPLKLESVSGIVKIASGADH 183
G+ + E + P++++ + ++ G +H
Sbjct: 359 GTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNH 403
>gi|302696855|ref|XP_003038106.1| hypothetical protein SCHCODRAFT_72210 [Schizophyllum commune H4-8]
gi|300111803|gb|EFJ03204.1| hypothetical protein SCHCODRAFT_72210, partial [Schizophyllum
commune H4-8]
Length = 418
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 163/352 (46%), Gaps = 58/352 (16%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGR------EAEGDSEF------------IPQT 115
V GG+H+V + E G V+T G ND+ ALGR E +EF I
Sbjct: 37 VASGGLHSVFVDERGTVWTCGVNDDAALGRVTQNVPNPEKPNEFLDVDELTSYPHPIQSL 96
Query: 116 VNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK---GEGIQKTPLKLESVS 172
V+ +AV++ AGDS + AL + G + WGSFR + GS+G P+ ++ ++
Sbjct: 97 VDEGFRAVKVVAGDSINAALSDAGELRLWGSFRANEGSLGFSKALKHQFNPVPVTMDLIN 156
Query: 173 ------GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
I +A G +H + LT+ GN+ T G EQ QLGR R + P
Sbjct: 157 KPGDYEKIASVACGGNHILALTTYGNIFTWGAGEQCQLGRKVLEG------RKIDGTTPR 210
Query: 227 EVPLKRKHIDDVF--TGVYNTF-ISSKGSILAFGLNNYSQLG-----EADSEVQKSGNTC 278
++ + +++ V G+Y++F ++ KG + +GLN Q G +DSEV
Sbjct: 211 KIKVGKRNNAPVLIGAGMYHSFAVTEKGDVYGWGLNTMGQTGTGYYRPSDSEVVLPKPVI 270
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN----------- 327
P L + + G+HH+L L S+G+++A GR + G+LGL +
Sbjct: 271 GLHP---DDLDGARVIKIVGGEHHTLFLISDGRVFACGRSNVGQLGLPDDHEAFQDREDS 327
Query: 328 --VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
V PV P P D + I+CG + A+ +G LY WG G +LG
Sbjct: 328 DFVDVPVQVPMP-DEHDDDPVVDISCGPHSNMAVTRDGALYSWGQGTQGELG 378
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 171/405 (42%), Gaps = 74/405 (18%)
Query: 159 EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
EGI+ E +GI +ASG H V + RG + T G + LGR+TQ N +
Sbjct: 20 EGIEDGKFGEEG-AGIESVASGGLHSVFVDERGTVWTCGVNDDAALGRVTQNVP--NPEK 76
Query: 219 GMSFLEPGEV-----PLKRKHIDDVFTGV-------YNTFISSKGSILAFG--LNNYSQL 264
FL+ E+ P++ +D+ F V N +S G + +G N L
Sbjct: 77 PNEFLDVDELTSYPHPIQ-SLVDEGFRAVKVVAGDSINAALSDAGELRLWGSFRANEGSL 135
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G + + ++ N T LI D +K +A G +H LAL + G I+ +G + +L
Sbjct: 136 GFSKA-LKHQFNPVPVTMDLINKPGDYEKIASVACGGNHILALTTYGNIFTWGAGEQCQL 194
Query: 324 GLKNVSEPVTEPTPIPSL----QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
G K + + T + ++ I G SFA+ +G +YGWG+ Q G G
Sbjct: 195 GRKVLEGRKIDGTTPRKIKVGKRNNAPVLIGAGMYHSFAVTEKGDVYGWGLNTMGQTGTG 254
Query: 380 ------------------KEDDI-----------------LNSEGKIYAFGRHDYGRLGL 404
DD+ L S+G+++A GR + G+LGL
Sbjct: 255 YYRPSDSEVVLPKPVIGLHPDDLDGARVIKIVGGEHHTLFLISDGRVFACGRSNVGQLGL 314
Query: 405 KN-------------VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+ V PV P P D + I+CG + A+ +G LY WG G
Sbjct: 315 PDDHEAFQDREDSDFVDVPVQVPMP-DEHDDDPVVDISCGPHSNMAVTRDGALYSWGQGT 373
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+LG + ++ P +I ++ ++ + VA GGQH++ L + K
Sbjct: 374 QGELGV-PDVEVRTPRQIVRREGGSWAAVTVACGGQHTIGLFRKK 417
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 34/126 (26%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVE-----------DLDNVVEVVVGGMHTV 82
G V CG+ + GQLGL D +R+ V+ D D VV++ G +
Sbjct: 299 GRVFACGRSNVGQLGLPDDHEAFQDREDSDFVDVPVQVPMPDEHDDDPVVDISCGPHSNM 358
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT-VNLPKK----------AVQISAGDSH 131
+T DG +Y+WG +G LG +P V P++ AV ++ G H
Sbjct: 359 AVTRDGALYSWGQGTQGELG---------VPDVEVRTPRQIVRREGGSWAAVTVACGGQH 409
Query: 132 SVALLE 137
++ L
Sbjct: 410 TIGLFR 415
>gi|303389130|ref|XP_003072798.1| alpha-tubulin suppressor-like protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303301940|gb|ADM11438.1| alpha-tubulin suppressor-like protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 359
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 172/356 (48%), Gaps = 42/356 (11%)
Query: 39 VLTCGQGDTGQLGLGPD-----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G QLGLG D V R +F D ++ +V G +HT+ L G +Y+W
Sbjct: 3 VFVFGSNAISQLGLGEDEGSTHVPTRLSFF---DGMSLSKVRCGSLHTLVLDTSGTLYSW 59
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
GCNDEGALGR G E P+ V L +K V + G S S AL G VY WG+FR ++G+
Sbjct: 60 GCNDEGALGR---GGDESTPEKVCLQEKVVDMDCGASISAALTSSGHVYVWGTFRSTNGT 116
Query: 154 MGLK-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL EGI P+K+ + I +++G L S+ + T G E G+LGR R++
Sbjct: 117 FGLTPSEGISFEPVKV-PLKNIRALSAGQSFIAALDSKDVIYTFGSNEFGELGR---RTS 172
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDD-----VFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
RN R L P V RK + + + +G+ + +++ G +G N Y QLG
Sbjct: 173 ERNKLRA---LIPDAVTTPRKRLQNHRFKSIASGLNHLIALNTDGEAYCWGSNLYGQLGH 229
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+E F + + + G++HSL + +G +Y GR+ G+LG++
Sbjct: 230 DKAEST-------FNKYKVPL---DGISQAVGGENHSLFVTKDGSLYGSGRNKEGQLGIQ 279
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQLGNGKE 381
NV E + PT + + + S SF+I G LY WG G LG+ +E
Sbjct: 280 NV-ENLKSPTKLGLSGVEAVRSYN-----SFSIGKVGNELYSWGTGFNGALGHEEE 329
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 153/369 (41%), Gaps = 72/369 (19%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
+V+ +GS S +G + EG P +L G + K+ G+ H ++L + G L + G
Sbjct: 2 SVFVFGSNAISQLGLG-EDEGSTHVPTRLSFFDGMSLSKVRCGSLHTLVLDTSGTLYSWG 60
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
C ++G LGR S P +V L+ K +D + ++S G + +G
Sbjct: 61 CNDEGALGRGGDEST------------PEKVCLQEKVVDMDCGASISAALTSSGHVYVWG 108
Query: 258 LNNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD-----KKFTMLASGQHHSLALNSEGK 311
+S N F TP S K L++GQ AL+S+
Sbjct: 109 -------------TFRSTNGTFGLTPSEGISFEPVKVPLKNIRALSAGQSFIAALDSKDV 155
Query: 312 IYAFGRHDYGRLGLKNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
IY FG +++G LG + P TP LQ+ SIA G A++++G
Sbjct: 156 IYTFGSNEFGELGRRTSERNKLRALIPDAVTTPRKRLQNHRFKSIASGLNHLIALNTDGE 215
Query: 365 LYGWGMGNGYQLGNGKEDDILN-----------------------SEGKIYAFGRHDYGR 401
Y WG QLG+ K + N +G +Y GR+ G+
Sbjct: 216 AYCWGSNLYGQLGHDKAESTFNKYKVPLDGISQAVGGENHSLFVTKDGSLYGSGRNKEGQ 275
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQLGNGKE 460
LG++NV E + PT + + + S SF+I G LY WG G LG+ +E
Sbjct: 276 LGIQNV-ENLKSPTKLGLSGVEAVRSYN-----SFSIGKVGNELYSWGTGFNGALGH-EE 328
Query: 461 DDILEPMKI 469
+ + EP KI
Sbjct: 329 ETLFEPKKI 337
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 110/276 (39%), Gaps = 49/276 (17%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
S+ FG N SQLG + E G+T P + + + G H+L L++ G
Sbjct: 2 SVFVFGSNAISQLGLGEDE----GST--HVPTRLSFFDGMSLSKVRCGSLHTLVLDTSGT 55
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG-- 369
+Y++G +D G LG E TP + + + CG +S A+ S G +Y WG
Sbjct: 56 LYSWGCNDEGALGRGG-----DESTPEKVCLQEKVVDMDCGASISAALTSSGHVYVWGTF 110
Query: 370 -----------------------MGNGYQLGNGKED-DILNSEGKIYAFGRHDYGRLGLK 405
+ N L G+ L+S+ IY FG +++G LG +
Sbjct: 111 RSTNGTFGLTPSEGISFEPVKVPLKNIRALSAGQSFIAALDSKDVIYTFGSNEFGELGRR 170
Query: 406 NVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
P TP LQ+ SIA G A++++G Y WG QLG+
Sbjct: 171 TSERNKLRALIPDAVTTPRKRLQNHRFKSIASGLNHLIALNTDGEAYCWGSNLYGQLGHD 230
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
K + K+ ++ Q G HS+ + K
Sbjct: 231 KAESTFNKYKVPLDGIS-----QAVGGENHSLFVTK 261
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 35/371 (9%)
Query: 24 SEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV 74
SE+ + GG G V T G+ + GQLG G + + F V++L +VV +
Sbjct: 31 SESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTE-KDSSYFGKVDELYDVVSL 89
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI-PQTVNLPKKAVQISAGDSHSV 133
HT+ +T+ G V+ WG N +G + EG P +N K VQ+S G HS+
Sbjct: 90 DSDMDHTLAITKHGTVWGWGYNSKGEI---TEGGKNIARPVQINGLKDIVQVSTGLVHSL 146
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
AL + G V++WG + +G +G P K+E +S IV I +GA+H + L++ G +
Sbjct: 147 ALDQSGAVWSWG--ENIYGQLGNGTNQDSSIPTKVEFLSNIVAIEAGAEHSLALSNDGKV 204
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
G E GQLG + N R + LE E+ + ++ + G+I
Sbjct: 205 WAWGRNEFGQLG--NGETEKSNIPRLVKNLENIEMIAGGDN--------HSLALDHDGAI 254
Query: 254 LAFGLNNYSQLGEADSEV-QKSGN----TCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
A+G N+ Q+G+ S V +K G P + L K +++G HS AL
Sbjct: 255 WAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLY-GKVKQVSAGIKHSTALTE 313
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G++YA+G ++YG+LG ++ + P+ + ++I I G+ SFA+D GV+Y W
Sbjct: 314 NGEVYAWGWNEYGQLGNGSMKDS---KVPLRNNVGRSIIDIETGSYHSFAVDESGVIYAW 370
Query: 369 GMGNGYQLGNG 379
G QLG+G
Sbjct: 371 GDATYGQLGDG 381
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 71/376 (18%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
V I+AG S L DGTV W + R++ G +G E K++ + +V + S D
Sbjct: 37 VSINAGGYVSTILRSDGTV--WTTGRNNVGQLGNGTEKDSSYFGKVDELYDVVSLDSDMD 94
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG- 241
H + +T G + G +G++ G + P ++ K I V TG
Sbjct: 95 HTLAITKHGTVWGWGYNSKGEI-----------TEGGKNIARPVQIN-GLKDIVQVSTGL 142
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
V++ + G++ ++G N Y QLG ++ P ++ LS+ + +G
Sbjct: 143 VHSLALDQSGAVWSWGENIYGQLGNGTNQDSS-------IPTKVEFLSN--IVAIEAGAE 193
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITSIACGNCVSFAI 359
HSLAL+++GK++A+GR+++G+LG TE + IP L + I IA G+ S A+
Sbjct: 194 HSLALSNDGKVWAWGRNEFGQLG-----NGETEKSNIPRLVKNLENIEMIAGGDNHSLAL 248
Query: 360 DSEGVLYGWGMGNGYQLGNG-------------------------------------KED 382
D +G ++ WG + Q+G+G K
Sbjct: 249 DHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHS 308
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L G++YA+G ++YG+LG ++ + P+ + ++I I G+ SFA+D G
Sbjct: 309 TALTENGEVYAWGWNEYGQLGNGSMKDS---KVPLRNNVGRSIIDIETGSYHSFAVDESG 365
Query: 443 VLYGWGMGNGYQLGNG 458
V+Y WG QLG+G
Sbjct: 366 VIYAWGDATYGQLGDG 381
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 41/271 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G+ GQLG G + + VE L N+V + G H++ L+ DGKV+ WG N
Sbjct: 152 GAVWSWGENIYGQLGNGTN-QDSSIPTKVEFLSNIVAIEAGAEHSLALSNDGKVWAWGRN 210
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG- 155
+ G LG E + IP+ V + I+ GD+HS+AL DG ++AWG +S+G +G
Sbjct: 211 EFGQLGN-GETEKSNIPRLVKNLENIEMIAGGDNHSLALDHDGAIWAWG--YNSNGQIGD 267
Query: 156 -----------LKGEGIQKTPLKLESVSGIVK-IASGADHFVMLTSRGNLLTAGCPEQGQ 203
L+ + + P+KL + G VK +++G H LT G + G E GQ
Sbjct: 268 GSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEYGQ 327
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKR---KHIDDVFTGVYNTF-ISSKGSILAFGLN 259
LG + + + +VPL+ + I D+ TG Y++F + G I A+G
Sbjct: 328 LGNGSMKDS--------------KVPLRNNVGRSIIDIETGSYHSFAVDESGVIYAWGDA 373
Query: 260 NYSQLGEADSEVQKSGNTCFF----TPHLIK 286
Y QLG D K GN + P +IK
Sbjct: 374 TYGQLG--DGTFGKDGNRITYMVRMNPIVIK 402
>gi|242208551|ref|XP_002470126.1| predicted protein [Postia placenta Mad-698-R]
gi|220730878|gb|EED84729.1| predicted protein [Postia placenta Mad-698-R]
Length = 445
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 194/426 (45%), Gaps = 86/426 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMER--------------KTFALVEDLDNVVEVVVGGMHTVCL 84
+ G G+ GQ G+G D+++ + +D ++ V GG+H++ +
Sbjct: 17 MFVWGAGNFGQFGMGADLLDEYDKPKKNLWIEKRMREGVFGDDEASLESVAAGGLHSLFV 76
Query: 85 TEDGKVYTWGCNDEGALGR------EAEGDSEF------------IPQTVNLPKKAVQIS 126
E G V++ G ND+ ALGR E + EF + V+ +AV+I+
Sbjct: 77 DEKGTVWSCGVNDDAALGRVTTDVPNPEKEGEFLDVDTLTAEPNPLQSLVDENFRAVRIA 136
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTP---LKLESVSGIVK----IA 178
AGD+ S A+ G + WGSFR G +G G Q P L+L+S G + +A
Sbjct: 137 AGDTISAAISSQGDLRVWGSFRGVEGVLGFSSGHRHQFLPASILELKSRPGDAEKFSGLA 196
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+G +H ++LT+ GN+ T G EQGQLGR RR + P ++ + + V
Sbjct: 197 AGNNHLLVLTTHGNVYTWGAGEQGQLGRKVLE------RRKIHGTVPEKIVFGHRSLKAV 250
Query: 239 FTGV--YNTF-ISSKGSILAFGLNNYSQLG------EADSEVQKSGNTCFFTPHLI---- 285
G Y++F + G + +GLN+ Q G AD+EVQ TP +
Sbjct: 251 VVGAGSYSSFAVDESGDVWGWGLNSMGQTGTGFMTNSADAEVQ--------TPKKVIGLD 302
Query: 286 -KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL---------KNVSEPVTEP 335
+L+ +A G+HH+L L S G++YA GR + G+LGL + + + +P
Sbjct: 303 KTTLNGATVVQIAGGEHHTLFLTSVGRVYACGRSEGGQLGLADDDVAFQDREFPDMLAKP 362
Query: 336 TPI--PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ILNS 387
I P D + I+ G + AI G LY WG G +LG G E + ++
Sbjct: 363 AIITFPDADDP-VVHISAGIHNNVAITKGGALYTWGTGPQGELGVGDETEARIPTVVVRR 421
Query: 388 EGKIYA 393
EG +A
Sbjct: 422 EGGSWA 427
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 162/389 (41%), Gaps = 78/389 (20%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-----PLK 231
+A+G H + + +G + + G + LGR+T + N + FL+ + PL+
Sbjct: 66 VAAGGLHSLFVDEKGTVWSCGVNDDAALGRVT--TDVPNPEKEGEFLDVDTLTAEPNPLQ 123
Query: 232 RKHIDDVFTGV-------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
+D+ F V + ISS+G + +G S G SG+ F P
Sbjct: 124 -SLVDENFRAVRIAAGDTISAAISSQGDLRVWG----SFRGVEGVLGFSSGHRHQFLPAS 178
Query: 285 IKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NVSEPVTE 334
I L + KF+ LA+G +H L L + G +Y +G + G+LG K + V E
Sbjct: 179 ILELKSRPGDAEKFSGLAAGNNHLLVLTTHGNVYTWGAGEQGQLGRKVLERRKIHGTVPE 238
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM------GNGY-------------- 374
K + + G+ SFA+D G ++GWG+ G G+
Sbjct: 239 KIVFGHRSLKAVV-VGAGSYSSFAVDESGDVWGWGLNSMGQTGTGFMTNSADAEVQTPKK 297
Query: 375 ---------------QLGNGKEDDI-LNSEGKIYAFGRHDYGRLGL---------KNVSE 409
Q+ G+ + L S G++YA GR + G+LGL + +
Sbjct: 298 VIGLDKTTLNGATVVQIAGGEHHTLFLTSVGRVYACGRSEGGQLGLADDDVAFQDREFPD 357
Query: 410 PVTEPTPI--PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
+ +P I P D + I+ G + AI G LY WG G +LG G E + P
Sbjct: 358 MLAKPAIITFPDADDPVV-HISAGIHNNVAITKGGALYTWGTGPQGELGVGDETEARIPT 416
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ ++ ++ + + GGQH++ L + K
Sbjct: 417 VVVRREGGSWAAVTASCGGQHTLALLRRK 445
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTF------ALVEDLDNVVEVVVGG--MHTVCLTEDG 88
G V T G G+ GQLG V+ER+ +V ++ VVVG + + E G
Sbjct: 209 GNVYTWGAGEQGQLGR--KVLERRKIHGTVPEKIVFGHRSLKAVVVGAGSYSSFAVDESG 266
Query: 89 KVYTWGCNDEGALG-----REAEGDSEFIPQTVNLPK------KAVQISAGDSHSVALLE 137
V+ WG N G G A+ + + + + L K VQI+ G+ H++ L
Sbjct: 267 DVWGWGLNSMGQTGTGFMTNSADAEVQTPKKVIGLDKTTLNGATVVQIAGGEHHTLFLTS 326
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGI----QKTPLKL---------ESVSGIVKIASGADHF 184
G VYA G R G +GL + + ++ P L ++ +V I++G +
Sbjct: 327 VGRVYACG--RSEGGQLGLADDDVAFQDREFPDMLAKPAIITFPDADDPVVHISAGIHNN 384
Query: 185 VMLTSRGNLLTAGCPEQGQLG 205
V +T G L T G QG+LG
Sbjct: 385 VAITKGGALYTWGTGPQGELG 405
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 37 GVVLTCGQGDTGQLGLG-----------PDVMERKTFALVEDLDNVVEVVVGGMH-TVCL 84
G V CG+ + GQLGL PD++ + D D+ V + G+H V +
Sbjct: 328 GRVYACGRSEGGQLGLADDDVAFQDREFPDMLAKPAIITFPDADDPVVHISAGIHNNVAI 387
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLE 137
T+ G +YTWG +G LG E ++ IP V + AV S G H++ALL
Sbjct: 388 TKGGALYTWGTGPQGELGVGDETEAR-IPTVVVRREGGSWAAVTASCGGQHTLALLR 443
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 172/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T ACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 164/392 (41%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T A G+ H+ A S G+IY+FG G+LG
Sbjct: 280 SHE-------INPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 168/360 (46%), Gaps = 59/360 (16%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
VYA G R G +G+ TP L ++ G IV IA+ H LT G + T G
Sbjct: 4 VYALG--RGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID-----DVFTGVYNTF-ISSKGS 252
+ GQLG RGM E VP++ +D + G +T ++ G+
Sbjct: 62 NDAGQLGV-----------RGM---EEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGA 107
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ ++G + Y QLG + P ++K D F+ +A+G +H+LAL G +
Sbjct: 108 LASWGGDEYGQLGFDSGNIVDG-----VQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDV 162
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
Y+FG G LG N+ + + P+ + SL +T IACG S A
Sbjct: 163 YSFGDGSSGALGHGNL-DGCSTPSLVKSLWGLGVTQIACGENHSAA-------------- 207
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L +GK++ +GR YG+LG ++ + P + +L D + IACG
Sbjct: 208 ------------LTVDGKVFTWGRGKYGQLG-HGSTQNIKLPVAVKALVDHDVIQIACGG 254
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ AI S+G L+ WG G Q G+G ++D+L P ++ QL ++QV++G +H+V+L
Sbjct: 255 DHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH--QLEGRVLVQVSAGARHTVVL 312
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 30/358 (8%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G+GD GQLG+G D + T + L ++V + HT LT++G+VYT
Sbjct: 1 GVAVYALGRGDLGQLGIG-DYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTT 59
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ND G LG + + +P V I+ G H+VA+ E G + +WG D +
Sbjct: 60 GSNDAGQLGVRGM-EEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGG--DEY 116
Query: 152 GSMGLKG----EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G +G+Q +K ++A+G H + LT G++ + G G LG
Sbjct: 117 GQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHG 176
Query: 208 TQRSASR-NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
S + + + L ++ H + ++ G + +G Y QLG
Sbjct: 177 NLDGCSTPSLVKSLWGLGVTQIACGENH---------SAALTVDGKVFTWGRGKYGQLGH 227
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
++ K P +K+L D +A G H+LA+ S+G+++++G +G+ G
Sbjct: 228 GSTQNIK-------LPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTG-H 279
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
E V P + L+ + + ++ G + + G +YGWG QLG D
Sbjct: 280 GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDF 337
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 38/332 (11%)
Query: 1 MTHLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK 60
++ L+ K + A + F+T E G V T G D GQLG+ ME +
Sbjct: 29 LSTLVGKDIVHIAASDYHTAFLTDE-----------GEVYTTGSNDAGQLGVRG--MEEQ 75
Query: 61 TFAL-VEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI-PQTV 116
+ V LD V + G HTV +TE G + +WG ++ G LG ++ + + P+ V
Sbjct: 76 VVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIV 135
Query: 117 NLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-- 172
+ +++AG H++AL G VY++G S G++G TP ++S+
Sbjct: 136 KGSRDLHFSRVAAGGYHTLALTGSGDVYSFGD--GSSGALGHGNLDGCSTPSLVKSLWGL 193
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
G+ +IA G +H LT G + T G + GQLG +++N + ++ + +
Sbjct: 194 GVTQIACGENHSAALTVDGKVFTWGRGKYGQLG----HGSTQNIKLPVAV----KALVDH 245
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I G + I+S G + ++G + Q G E +P + L +
Sbjct: 246 DVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKED-------VLSPKQVHQLEGRV 298
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+++G H++ L G++Y +G + +LG
Sbjct: 299 LVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 190/422 (45%), Gaps = 60/422 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLGLG + +E L++V++V G H++ L +DG V+ WG N
Sbjct: 128 GTVWTWGYNSYGQLGLGEAGEIERIPKKIEGLEDVIKVAAGSRHSLALKKDGTVWAWGYN 187
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG E+ P V I AGD SVAL +DGTV+ WG + G +G
Sbjct: 188 YYGQLGDESN-IRRNTPVQVKGLTGVKDIDAGDFFSVALRDDGTVWGWG--YNYKGQIGC 244
Query: 157 KGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G GI PL+ VS I +I++G +H + L N+ G ++GQLG T S R
Sbjct: 245 -GTGINSNVPLQTVGVSNITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRI 303
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+ SF E V + + I G++ +G N Y +G + ++
Sbjct: 304 PEKLSSFTEVKSVKAGT---------MVSAAIKEDGTLWIWGDNTYGIMGNS-----RNI 349
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
N+ +P K +S K L Q+ + AL ++G ++ +G++ G LGL +
Sbjct: 350 NS---SPVQRKDISGIKAVEL--NQYCAAALKNDGTVWTWGKNINGILGLGTALD----- 399
Query: 336 TPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
+ IPS+ T + I+CG I S+G L+ W GY +
Sbjct: 400 SQIPSVVSGTGDVEVISCGKTHMAIIKSDGTLWTW----GYNI----------------- 438
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
YG+LG NV + +TEP I + + I+ I+CG AID L+ WG +
Sbjct: 439 -----YGQLGNGNV-DYITEPVTINGISN--ISKISCGGKHVLAIDENKTLWAWGNNDYL 490
Query: 454 QL 455
QL
Sbjct: 491 QL 492
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 62/409 (15%)
Query: 118 LPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVS 172
PKK+ VQ++ G+ H++AL +DGTV+ WG +S+G +GL G I++ P K+E +
Sbjct: 103 FPKKSMEGFVQVACGEYHTIALKKDGTVWTWG--YNSYGQLGLGEAGEIERIPKKIEGLE 160
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
++K+A+G+ H + L G + G GQLG N RR G +K
Sbjct: 161 DVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGD------ESNIRRNTPVQVKGLTGVKD 214
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D F+ + G++ +G N Q+G T + ++++
Sbjct: 215 IDAGDFFS----VALRDDGTVWGWGYNYKGQIGCG---------TGINSNVPLQTVGVSN 261
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
T +++G H LAL+ + ++ +G D G+LG + + P + S + + S+ G
Sbjct: 262 ITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTE--VKSVKAG 319
Query: 353 NCVSFAIDSEGVLYGWG------MGNGYQLGNG--KEDDI---------------LNSEG 389
VS AI +G L+ WG MGN + + + DI L ++G
Sbjct: 320 TMVSAAIKEDGTLWIWGDNTYGIMGNSRNINSSPVQRKDISGIKAVELNQYCAAALKNDG 379
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGW 447
++ +G++ G LGL + + IPS+ T + I+CG I S+G L+ W
Sbjct: 380 TVWTWGKNINGILGLGTALD-----SQIPSVVSGTGDVEVISCGKTHMAIIKSDGTLWTW 434
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G QLGNG D I EP+ I G + +++ GG+H + + + K
Sbjct: 435 GYNIYGQLGNGNVDYITEPVTINGIS----NISKISCGGKHVLAIDENK 479
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 206/511 (40%), Gaps = 103/511 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V G GD GQLG G + + V V G M + + EDG ++ WG N
Sbjct: 281 VWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVKSVKAGTMVSAAIKEDGTLWIWGDNTY 340
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
G +G +S + + KAV+++ + AL DGTV+ WG ++ +G +GL
Sbjct: 341 GIMGNSRNINSSPVQRKDISGIKAVELN--QYCAAALKNDGTVWTWG--KNINGILGLGT 396
Query: 159 EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-----ITQRSAS 213
+ P + + I+ G H ++ S G L T G GQLG IT+ +
Sbjct: 397 ALDSQIPSVVSGTGDVEVISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITE-PVT 455
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
N +S + G KH+ I ++ A+G N+Y QL + +
Sbjct: 456 INGISNISKISCG-----GKHV---------LAIDENKTLWAWGNNDYLQLIDDVGLSAE 501
Query: 274 SGNTCFFTPHLIKSLSDKK----------------------------------------- 292
SG+ + P +KS D K
Sbjct: 502 SGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAKNTVAGDEQSVYLPYKIE 561
Query: 293 ----FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
T ++ G++H LAL +G +Y+ G +G+LG + + + + K +T+
Sbjct: 562 GLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGLTN 621
Query: 349 I---ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE------------DDI--------- 384
I A G+ S A+ ++G ++ WG +L +G + ++I
Sbjct: 622 IVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSLEPMQAEGLENICAISAGNNY 681
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITSIACGNCVSFAID 439
L +G ++A+G + YG+LG T T +P D + I I G SFAI
Sbjct: 682 NLALKEDGTVWAWGDNTYGQLG-----NGSTYKTNVPVQVDGLENIVKIIAGRDSSFAIT 736
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+G ++ WG N QLG+G + L P+KI+
Sbjct: 737 KDGDVWAWGKNNCGQLGDGTTQNRLTPVKID 767
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 203/486 (41%), Gaps = 59/486 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQ+G G + V + N+ ++ G H + L +D V+ WG
Sbjct: 229 GTVWGWGYNYKGQIGCGTGINSNVPLQTV-GVSNITQISAGDEHVLALDKDKNVWGWGAG 287
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D+G LG IP+ ++ + + AG S A+ EDGT++ WG +++G MG
Sbjct: 288 DKGQLGNGTAASFLRIPEKLSSFTEVKSVKAGTMVSAAIKEDGTLWIWGD--NTYGIMG- 344
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-RSASRN 215
I +P++ + +SGI + L + G + T G G LG T S +
Sbjct: 345 NSRNINSSPVQRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPS 404
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
G +E + + H+ I S G++ +G N Y QLG +G
Sbjct: 405 VVSGTGDVEV--ISCGKTHM---------AIIKSDGTLWTWGYNIYGQLG--------NG 445
Query: 276 NTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL----GLKNVSE 330
N + T P I +S+ + ++ G H LA++ ++A+G +DY +L GL S
Sbjct: 446 NVDYITEPVTINGISN--ISKISCGGKHVLAIDENKTLWAWGNNDYLQLIDDVGLSAESG 503
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAI--DSEGVLYGW------------------GM 370
P +K + I + + D E +Y G+
Sbjct: 504 SNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAKNTVAGDEQSVYLPYKIEGL 563
Query: 371 GNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI- 428
+ GK + L +G +Y+ G +G+LG + + + + K +T+I
Sbjct: 564 EGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGLTNIV 623
Query: 429 --ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
A G+ S A+ ++G ++ WG +L +G + LEPM+ EG + + +++G
Sbjct: 624 AVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSLEPMQAEGLE----NICAISAGN 679
Query: 487 QHSVIL 492
+++ L
Sbjct: 680 NYNLAL 685
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMER---KTFALVED--LDNVVEVVVGGMHTVCLTEDGKVY 91
G V + G GQLG G +TF L + L N+V V G H+V L DG V+
Sbjct: 583 GYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVW 642
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
TWG N G L A G+ F P + ISAG+++++AL EDGTV+AWG +
Sbjct: 643 TWGSNQFGEL---AHGNDTFSLEPMQAEGLENICAISAGNNYNLALKEDGTVWAWGD--N 697
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
++G +G P++++ + IVKI +G D +T G++ G GQLG T
Sbjct: 698 TYGQLGNGSTYKTNVPVQVDGLENIVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTT 757
Query: 210 RS 211
++
Sbjct: 758 QN 759
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 34/270 (12%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK---- 120
+E L+ V +V VG H + L +DG VY+ G + G LG ++ +T NL K
Sbjct: 560 IEGLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGL 619
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
V ++AG HSVAL DGTV+ WGS + G + + P++ E + I I++
Sbjct: 620 TNIVAVAAGSEHSVALKNDGTVWTWGS--NQFGELAHGNDTFSLEPMQAEGLENICAISA 677
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK---RKHID 236
G ++ + L G + G GQLG + + VP++ ++I
Sbjct: 678 GNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTN--------------VPVQVDGLENIV 723
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ G ++F I+ G + A+G NN QLG+ ++ + TP I + K
Sbjct: 724 KIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQNR-------LTPVKIDAF--KGCKS 774
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ SG ++ L ++G + G + G + L
Sbjct: 775 IVSGMDFTMVLMNDGTVIGVGSNVSGVMTL 804
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 32/186 (17%)
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------- 384
T P + +ACG + A+ +G ++ WG + QLG G+ +I
Sbjct: 101 TEFPKKSMEGFVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGLE 160
Query: 385 --------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L +G ++A+G + YG+LG ++ + TP+ + I
Sbjct: 161 DVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGDES---NIRRNTPVQVKGLTGVKDIDA 217
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ +G ++GWG Q+G G + P++ G ++N T Q+++G +H +
Sbjct: 218 GDFFSVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVG--VSNIT--QISAGDEHVL 273
Query: 491 ILAKPK 496
L K K
Sbjct: 274 ALDKDK 279
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 184/379 (48%), Gaps = 36/379 (9%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNV 71
E P Q V + S V + G+G+ GQLG G D +R L+ D+ +
Sbjct: 16 EAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHG-DAEDRPVPTLLSGFDVPGI 74
Query: 72 VEVVV-GGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISA 127
VV+ G HT + E ++Y+WG D G LG D F PQ + + K QI+
Sbjct: 75 ASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDV-FHPQPIEALQGIKIKQIAC 133
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFV 185
GDSH +A+ + G V++WG R+ +G +GL P K+ + G+ IA+GA+H
Sbjct: 134 GDSHCLAVTDAGQVHSWG--RNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTA 191
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYN 244
+ G+L G + G LG RN R L P +V ++ + + V G +
Sbjct: 192 AILEDGDLYGWGWGQYGNLGL-----GDRNDR-----LVPEKVSSVEGEKMVLVACGWRH 241
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
T +SS G + +G + Y QLG D E PH +++L D+ + +A G H+
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHGDFEDH-------LVPHKLEALKDRFISQIAGGWRHT 294
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDS 361
+A+ +GK+Y +G + +G++G V++ V +P+ + ++ + +ACG + A+
Sbjct: 295 MAVAGDGKLYGWGWNKFGQVG---VADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTE 351
Query: 362 EGVLYGWGMGNGYQLGNGK 380
++ WG G QLG+G+
Sbjct: 352 NKNVFSWGRGTSGQLGHGE 370
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ +++GA+H V L S + + G E GQLG R + L +VP
Sbjct: 22 VALVSAGANHSVALLSSKAVCSWGRGEDGQLGH-----GDAEDRPVPTLLSGFDVP---G 73
Query: 234 HIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
V G +T + + + ++G ++ +LG +S + F P I++L
Sbjct: 74 IASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNS-------SDVFHPQPIEALQGI 126
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K +A G H LA+ G+++++GR+ G+LGL N + + P I + + + IA
Sbjct: 127 KIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL-PQKIHAFEGVCVKMIAA 185
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-------------------------- 385
G + AI +G LYGWG G LG G +D L
Sbjct: 186 GAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV 245
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+S G +Y +G YG+LG + + + P + +L+D+ I+ IA G + A+ +G LY
Sbjct: 246 SSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGWRHTMAVAGDGKLY 304
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
GWG Q+G D P+++ + V QVA G +H++ L + K
Sbjct: 305 GWGWNKFGQVGVADNVDHCSPVQVIFP--DEQKVAQVACGWRHTLALTENK 353
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 175/433 (40%), Gaps = 78/433 (18%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP-----QTVNLPKKAVQI 125
V V G H+V L V +WG ++G LG GD+E P ++P A +
Sbjct: 22 VALVSAGANHSVALLSSKAVCSWGRGEDGQLGH---GDAEDRPVPTLLSGFDVPGIASVV 78
Query: 126 SAGDSHSVALL-EDGTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSGIV--KIAS 179
G H+ A E +Y+WG G G G G P +E++ GI +IA
Sbjct: 79 ICGADHTTAYSDEQMQLYSWGW-----GDFGRLGHGNSSDVFHPQPIEALQGIKIKQIAC 133
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + +T G + + G + GQLG + E +P K + V
Sbjct: 134 GDSHCLAVTDAGQVHSWGRNQNGQLG--------------LGNTEDSLLPQKIHAFEGVC 179
Query: 240 TGV------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ + I G + +G Y LG D + P + S+ +K
Sbjct: 180 VKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDR-------LVPEKVSSVEGEKM 232
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
++A G H++ ++S G +Y +G YG+LG + + + P + +L+D+ I+ IA G
Sbjct: 233 VLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGW 291
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
+ A+ +G LYGWG + + G V++ V
Sbjct: 292 RHTMAVAGDGKLYGWG-----------------------------WNKFGQVGVADNVDH 322
Query: 414 PTPIPSL--QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+P+ + ++ + +ACG + A+ ++ WG G QLG+G+ D P I+
Sbjct: 323 CSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDA 382
Query: 472 KQLNNYTVLQVAS 484
L+ Y + S
Sbjct: 383 LSLDGYACKNLES 395
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITS 348
++ ++++G +HS+AL S + ++GR + G+LG + + PV PT + I S
Sbjct: 19 EQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIAS 76
Query: 349 IA-CGNCVSFAIDSEGV-LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ CG + A E + LY WG G D+GRLG N
Sbjct: 77 VVICGADHTTAYSDEQMQLYSWGWG--------------------------DFGRLGHGN 110
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
S+ V P PI +LQ I IACG+ A+ G ++ WG QLG G +D L P
Sbjct: 111 SSD-VFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLP 169
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVIL 492
KI V +A+G +H+ +
Sbjct: 170 QKIHA--FEGVCVKMIAAGAEHTAAI 193
>gi|347838121|emb|CCD52693.1| hypothetical protein [Botryotinia fuckeliana]
Length = 614
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 178/403 (44%), Gaps = 68/403 (16%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+ G + G+LGLG D + R VV++V GGMH LT+D K+ TWG
Sbjct: 197 IYVFGCNEAGELGLGLQTKKDTINRPVKNPALTARGVVQMVAGGMHGAALTKDNKILTWG 256
Query: 95 CNDEGALGR------------EAEGDS-----------EFIPQTV---NLPKKAV--QIS 126
D ALGR +AE D E P V N+P+ + QI+
Sbjct: 257 VADGLALGRKTDDWVAPERDADAESDDESAAADARNPLESTPGEVDLTNIPEDTIFTQIT 316
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHF 184
AGD+ + AL DG VY WGS R + G MG + +++T P+ + + IVK+A+G +H+
Sbjct: 317 AGDNATYALTNDGLVYGWGSIRGADGPMGFTKD-VKETLVPILIPGLKNIVKLAAGNNHY 375
Query: 185 VMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L ++G + G E QLG RI +RS ++ L P E L + + D+F G
Sbjct: 376 LALNNKGAVFAWGAGEHNQLGRRIVERSR-------LNALVPREFGLPKAMV-DIFCGSE 427
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN---TCFFTPHLIKSLSDKKFTMLASG 299
++F I G++ ++G NN Q G + K G T + L DK M+A+G
Sbjct: 428 HSFAIHKNGTVYSWGANNMGQCG----QFSKDGTLTEEVTSTATKVSILKDKNIKMMAAG 483
Query: 300 QHHSLALNSEGKIYAFGR-------HDYGRL-------GLKNVSEPVTEPTPIPSLQDKT 345
SLAL EG++ FG+ HD L +N + P P +
Sbjct: 484 NASSLALTHEGEVLYFGKAQDGLSGHDVEALPEDVIIRNERNQRSIIKTPLTFPF--KGS 541
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
++ + + D Y WG Q G + D+ +E
Sbjct: 542 YIAMGSDHSIVLGPDGHSPHYSWGFNTYRQTGLEDDQDVYIAE 584
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 165/431 (38%), Gaps = 89/431 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLL 194
+Y +G + G +GL K + I + P+K +++ G+V++ +G H LT +L
Sbjct: 197 IYVFGC--NEAGELGLGLQTKKDTINR-PVKNPALTARGVVQMVAGGMHGAALTKDNKIL 253
Query: 195 TAGCPEQGQLGRITQ---------------RSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
T G + LGR T SA+ +AR + PGEV L D +F
Sbjct: 254 TWGVADGLALGRKTDDWVAPERDADAESDDESAAADARNPLEST-PGEVDLTNIPEDTIF 312
Query: 240 TGVYNTFISSKGSILAFGLNN------YSQLGEADSEVQKSGNTC-FFTPHLIKSLSDKK 292
T + + G + L N + + AD + + + P LI L K
Sbjct: 313 TQI------TAGDNATYALTNDGLVYGWGSIRGADGPMGFTKDVKETLVPILIPGL--KN 364
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIAC 351
LA+G +H LALN++G ++A+G ++ +LG + V + P K + I C
Sbjct: 365 IVKLAAGNNHYLALNNKGAVFAWGAGEHNQLGRRIVERSRLNALVPREFGLPKAMVDIFC 424
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE----------------------- 388
G+ SFAI G +Y WG N Q G +D L E
Sbjct: 425 GSEHSFAIHKNGTVYSWGANNMGQCGQFSKDGTLTEEVTSTATKVSILKDKNIKMMAAGN 484
Query: 389 ---------GKIYAFGR-------HDYGRL-------GLKNVSEPVTEPTPIPSLQDKTI 425
G++ FG+ HD L +N + P P +
Sbjct: 485 ASSLALTHEGEVLYFGKAQDGLSGHDVEALPEDVIIRNERNQRSIIKTPLTFPF--KGSY 542
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
++ + + D Y WG Q G + D+ ++E K + ++ A G
Sbjct: 543 IAMGSDHSIVLGPDGHSPHYSWGFNTYRQTGLEDDQDVYIAEELENKNIEGKKLVWAAGG 602
Query: 486 GQHSVILAKPK 496
GQ S + A P+
Sbjct: 603 GQFSFLAAIPE 613
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 168/350 (48%), Gaps = 29/350 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + V +V G HTV + +DG VYT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFAN-KKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CND G LG E Q V L + V +S G++H++AL + G VY+WG DS G
Sbjct: 60 CNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG--LDSDGQ 115
Query: 154 MGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 116 LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 176 KKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 229 DR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 331 PVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 282 EIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + ++G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSEEYIR------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIDSEDCFCVKRIFSGGDQS 374
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 36/300 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY+WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 112 SDGQLG--LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 -----NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 276 HNSTSHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P ++KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A++ +G +Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG- 109
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L+S+G++ G +Y R+ P I SL D I +AC
Sbjct: 110 --------------LDSDGQLGLLGSEEYIRV-----------PRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E + EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 173/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + NV +V G HT + +DG VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFIN-KNVRDVGCGNRHTGFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CND G LG + S P+ V + V +S G++H++AL + G V++WG +HG
Sbjct: 60 CNDLGQLGHD---KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG--HAAHG 114
Query: 153 SMGLK-GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G+ E + P ++S+S IV++A G H + L+ N+ + G + GQLG ++
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ R S +P HI G ++ ++ G+I +G N + QLG D
Sbjct: 175 KRKESAPRHIKSL---SGIPF--AHI--AAGGGHSFALTISGAIFGWGRNKFGQLGLND- 226
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E +S P L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 227 ETDRS------DPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
V P + L +T IACG + A + S G +Y +G+G QLG G
Sbjct: 281 HEVN-PRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIG 330
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 166/393 (42%), Gaps = 67/393 (17%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E + P + + + + G H + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+ GQLG R +P +V L + I V G +T ++ KG + ++
Sbjct: 61 NDLGQLGHDKSRK------------KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSW 108
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + Q+G + +E P IKSLSD + +A G HHSLAL+ E IY++G
Sbjct: 109 GHAAHGQIGVSIAE------DYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG 162
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ YG+LGL + + P I SL IA G SFA+ G ++GWG QL
Sbjct: 163 QNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D L EG ++ FG YG+LG + S
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G +Y +G+G QLG G + P +
Sbjct: 283 VN-PRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341
Query: 470 EGKQLNN-------------YTVLQVASGGQHS 489
+G L + Y V ++ SGG S
Sbjct: 342 KGNWLTHEDYVRRLPEANGCYCVKRIYSGGDQS 374
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD +V V G HT+ L + G+V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHDK---SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G +G D +P+ + + VQ++ G HS+AL ++ +Y+WG ++ +G
Sbjct: 110 HAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG--QNQYG 167
Query: 153 SMGLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E +++ P ++S+SGI IA+G H LT G + G + GQLG +
Sbjct: 168 QLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE 227
Query: 210 RSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGE- 266
S +P + L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 228 TDRS----------DPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 267 -ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
A EV P + L T +A G+ H+LA S G+IY+FG G+LG
Sbjct: 278 SASHEV---------NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Query: 325 LKNVS 329
+ + S
Sbjct: 329 IGSTS 333
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP +K + + CGN
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGN----------------- 43
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ + +G +Y G +D G+LG + +P + +L + I +++C
Sbjct: 44 ---------RHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDAQIIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG Q+G + ED I P I K L++ ++QVA G HS
Sbjct: 92 GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNI--KSLSDIQIVQVACGHHHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 223/526 (42%), Gaps = 95/526 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG G + + R V + +VV V G TV L DG V+TWG N
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTL-RAVPVQVPGMSDVVAVAAAGSRTVALKADGTVWTWGIN 272
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG S Q NL I+AG H++A+ +DG+ ++WG+ +++G +G
Sbjct: 273 SSGELGDGTTTHSLLPIQVPNL-SGVTNIAAGLWHTLAVKKDGSAWSWGN--NAYGQLGD 329
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P+ + ++G+ ++ G H V L G G GQLG T ++S
Sbjct: 330 GTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSI-- 387
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADS------ 269
P +V + ++ + G Y+T + G++ A+G N Y LG ++
Sbjct: 388 --------PVQVAALTQAVE-IDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVP 438
Query: 270 -EVQKSGNTCFFTPHLIKSLSDKKFTM--------------------------------- 295
+V SG F + KK M
Sbjct: 439 VQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVV 498
Query: 296 -----LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
A G HS+AL + G ++ +G + YG+LG + V PT +P + + +A
Sbjct: 499 SGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLG-NGTTTQVVTPTQLPGMSG--VIDVA 555
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILN 386
G + A+ ++G + WG QLGNG + L
Sbjct: 556 AGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAISAGSTHTVALK 615
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
++G ++A+G + YG+LG + + P +PSL++ + SIA G+ + A+ +G L+
Sbjct: 616 ADGTVWAWGSNLYGQLGDGTFTHR-SSPVQVPSLEN--VVSIAAGHFHTVAVKGDGTLWV 672
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG G QLG G + P+++ G + +A+GG H+V L
Sbjct: 673 WGYGPQGQLGLGTTTNQSVPVQVSGLG----HAVAIAAGGYHTVAL 714
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 221/542 (40%), Gaps = 114/542 (21%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
+L Q N S + + TL K G + G GQLG G + R LV
Sbjct: 285 SLLPIQVPNLSGVTNIAAGLWHTLAVKKDGSA-WSWGNNAYGQLGDG-TTLNRLRPVLVA 342
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS 126
L V + G +HTV L DG + WG N G LG +S IP V +AV+I
Sbjct: 343 GLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSS-IPVQVAALTQAVEID 401
Query: 127 AGDSHSVALLEDGTVYAWGS---------------------------------------- 146
AG H++A +DGT+YAWG
Sbjct: 402 AGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERK 461
Query: 147 ----------FRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLL 194
F H + G G+G Q+T VSGIVK A G+ H V L + G +
Sbjct: 462 KVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVW 521
Query: 195 TAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGS 252
T G GQLG T + + GMS + DV GV +T +S+ G+
Sbjct: 522 TWGYNAYGQLGNGTTTQVVTPTQLPGMS------------GVIDVAAGVNHTVALSADGT 569
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ A+G N Y QLG + Q TP + L T +++G H++AL ++G +
Sbjct: 570 VAAWGYNAYGQLGNGTTANQ-------LTPQSVPEL--DGVTAISAGSTHTVALKADGTV 620
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+A+G + YG+LG + + P +PSL++ + SIA G+ + A+ +G L+ WG G
Sbjct: 621 WAWGSNLYGQLGDGTFTHR-SSPVQVPSLEN--VVSIAAGHFHTVAVKGDGTLWVWGYGP 677
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
QLG G + + P+ +IA G
Sbjct: 678 QGQLGLGTTTN-----------------------------QSVPVQVSGLGHAVAIAAGG 708
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ A+ + G ++ WG + QLG+ P+ + G L N V+ +A+GG + +L
Sbjct: 709 YHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPG--LTN--VIALAAGGYTTAVL 764
Query: 493 AK 494
+
Sbjct: 765 KR 766
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 230/543 (42%), Gaps = 114/543 (20%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
TL+ K+GG + G +GQLG G +R V L+ VV G H+V +TEDG
Sbjct: 157 TLEVKSGGSL-WAWGNNPSGQLGNGQRT-QRNAPTRVRGLNQVVSASAGAEHSVAVTEDG 214
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGS 146
V+TWG N G LG +G + V +P V ++A S +VAL DGTV+ WG
Sbjct: 215 SVWTWGSNAYGQLG---DGTNTLRAVPVQVPGMSDVVAVAAAGSRTVALKADGTVWTWG- 270
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+S G +G P+++ ++SG+ IA+G H + + G+ + G GQLG
Sbjct: 271 -INSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGD 329
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
T ++ L P V + + GV +T + G+ +G N+ QLG
Sbjct: 330 GTT----------LNRLRPVLVA-GLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLG 378
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ T P + +L+ + + +G +H+LA +G +YA+G + YG LG
Sbjct: 379 NGTT-------TNSSIPVQVAALT--QAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGT 429
Query: 326 KNVSEPVTEPTPIP--------------------------------------SLQDKT-- 345
N + + P +P L D T
Sbjct: 430 GNTTSS-SVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTT 488
Query: 346 ------------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED----------- 382
I A G+ S A+ + G ++ WG QLGNG
Sbjct: 489 QRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGM 548
Query: 383 ----DI---------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
D+ L+++G + A+G + YG+LG + +T P +P L +T+I+
Sbjct: 549 SGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLT-PQSVPELDG--VTAIS 605
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G+ + A+ ++G ++ WG QLG+G P+++ L N V+ +A+G H+
Sbjct: 606 AGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQV--PSLEN--VVSIAAGHFHT 661
Query: 490 VIL 492
V +
Sbjct: 662 VAV 664
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 151/315 (47%), Gaps = 34/315 (10%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GG V T G GQLG G L + V++V G HTV L+ DG V WG
Sbjct: 517 GGAVWTWGYNAYGQLGNGTTTQVVTPTQL-PGMSGVIDVAAGVNHTVALSADGTVAAWGY 575
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG + + PQ+V ISAG +H+VAL DGTV+AWGS + +G +G
Sbjct: 576 NAYGQLGNGTTAN-QLTPQSVPELDGVTAISAGSTHTVALKADGTVWAWGS--NLYGQLG 632
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ +P+++ S+ +V IA+G H V + G L G QGQLG T + S
Sbjct: 633 DGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQS-- 690
Query: 216 ARRGMSFLEPGEVPLKRK---HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
VP++ H + G Y+T + + G + +G N+ QLG+A + +
Sbjct: 691 ------------VPVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDA-TII 737
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
Q+ ++P L+ L++ LA+G + + L +G ++AFG + G+LG +
Sbjct: 738 QR------YSPVLVPGLTN--VIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTT-- 787
Query: 332 VTEPTPIPSLQDKTI 346
+ +P +L + +
Sbjct: 788 -SRSSPTATLMNSVV 801
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 197/463 (42%), Gaps = 68/463 (14%)
Query: 66 EDLDNVVE----VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
E L N V+ V G HT+ + G ++ WG N G LG + P V +
Sbjct: 138 EVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLG-NGQRTQRNAPTRVRGLNQ 196
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
V SAG HSVA+ EDG+V+ WGS +++G +G ++ P+++ +S +V +A+
Sbjct: 197 VVSASAGAEHSVAVTEDGSVWTWGS--NAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAAG 254
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
V L + G + T G G+LG T + L P +VP + ++ G
Sbjct: 255 SRTVALKADGTVWTWGINSSGELGDGTTTHS----------LLPIQVP-NLSGVTNIAAG 303
Query: 242 VYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+++T K GS ++G N Y QLG+ + + P L+ L+ + L+ G
Sbjct: 304 LWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNR-------LRPVLVAGLTGVR--ALSGGV 354
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H++AL +G + +G + G+LG + + P + +L I G + A
Sbjct: 355 VHTVALKWDGTAWGWGYNSAGQLG-NGTTTNSSIPVQVAALTQA--VEIDAGGYHTLARR 411
Query: 361 SEGVLYGWG----------------------------MGNGYQLGNGKEDDI-LNSEGKI 391
+G LY WG G GY + + + +
Sbjct: 412 QDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTL 471
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+A+G + G LG ++ T PT + I A G+ S A+ + G ++ WG
Sbjct: 472 FAWGHNTNGELGDGTTTQR-TSPTAVVV---SGIVKTAGGSAHSVALGAGGAVWTWGYNA 527
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QLGNG ++ P ++ G V+ VA+G H+V L+
Sbjct: 528 YGQLGNGTTTQVVTPTQLPGMS----GVIDVAAGVNHTVALSA 566
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G + G G GQLGLG + V L + V + GG HTV L +G+V+TWG
Sbjct: 666 GDGTLWVWGYGPQGQLGLG-TTTNQSVPVQVSGLGHAVAIAAGGYHTVALLANGQVWTWG 724
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG +A + P V + ++AG + L DGTV+A+G + +G +
Sbjct: 725 YNSSGQLG-DATIIQRYSPVLVPGLTNVIALAAGGYTTAVLKRDGTVWAFG--YNPNGQL 781
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQR 210
G G ++ ++ +V ++SG +H + L + G GQL G TQR
Sbjct: 782 G-DGTTTSRSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQR 838
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 186/439 (42%), Gaps = 89/439 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
VL G G+ GQLGLG ++ ++ + +V+ L NVV VV G +++ + EDG+++TWG N
Sbjct: 7 VLAWGAGEDGQLGLG-NLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG-----SFRD 149
G LG E +E P V K VQ + G H +A+ E+G YAWG +
Sbjct: 66 QRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCAE 125
Query: 150 SHGSMGLKGEGIQKT-------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
+ + +G K P + + ++ +G H V+LT G++ T G P
Sbjct: 126 EQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSVVLTEEGHVWTWGQPWP- 184
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGL 258
G I Q S VP++ + +++V +N + G + A+G
Sbjct: 185 -PGDIKQIS----------------VPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGN 227
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N Y QLG D++ + S P +K L+ +A+G HS+AL +G +Y +GR
Sbjct: 228 NEYGQLGTGDTQPRSS-------PVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRG 280
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
++GRLG + P + L + + ++CG S A
Sbjct: 281 EHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAA------------------- 321
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTPIPSLQDKTITS-------- 427
G++++FGR D+GRLG PV P + I S
Sbjct: 322 -------TISGRMFSFGRGDHGRLGYSGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGST 374
Query: 428 ------IACGNCVSFAIDS 440
+ACG + A+ S
Sbjct: 375 GWVVKLVACGGRHALAVAS 393
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 175/435 (40%), Gaps = 80/435 (18%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG D + + L V + AG +S+A+ EDG ++ WG
Sbjct: 7 VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWG--W 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + TP ++++++ IV+ A G H + + G G E GQ
Sbjct: 65 NQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCA 124
Query: 206 RITQRSASRNARRGMSFLEPGEVPLK---RKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
Q +N +P + R + + G ++ ++ +G + +G
Sbjct: 125 EEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSVVLTEEGHVWTWGQP-- 182
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSD-------KKFTMLASGQHHSLALNSEGKIYA 314
+ P IK +S + TM+A G H+LAL G+++A
Sbjct: 183 ------------------WPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWA 224
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G ++YG+LG + ++P + P P+ L + IA G S A+ +G +YGW
Sbjct: 225 WGNNEYGQLGTGD-TQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGW------ 277
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
GR ++GRLG + P + L + + ++CG
Sbjct: 278 --------------------GRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTH 317
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI----------------EGKQLNNYT 478
S A G ++ +G G+ +LG P+++ E +
Sbjct: 318 SVAATISGRMFSFGRGDHGRLGYSGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTGWV 377
Query: 479 VLQVASGGQHSVILA 493
V VA GG+H++ +A
Sbjct: 378 VKLVACGGRHALAVA 392
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 39/200 (19%)
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ S + A+G + G+LGL N+ + + +L+D + S+ G+ S AI +G L
Sbjct: 1 MASRTCVLAWGAGEDGQLGLGNLQDK-DSVCVVDALRDHNVVSVVAGSRNSLAICEDGRL 59
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ WG + G LG ++ + P+ + +L + I
Sbjct: 60 FTWGW--------------------------NQRGTLGHPPETKTESTPSQVKALANVKI 93
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGY-----------QLGNGKEDDILEPMKIEGKQL 474
A G A+D EG Y WG GN Y Q G+ + + I +
Sbjct: 94 VQAAIGGWHCLAVDEEGRTYAWG-GNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCA 152
Query: 475 NNYTVLQVASGGQHSVILAK 494
V Q+ +GG HSV+L +
Sbjct: 153 PRLCVRQLTAGGTHSVVLTE 172
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D + V L + VV+V GG H+V T G+++++G
Sbjct: 272 GAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFG 331
Query: 95 CNDEGALG 102
D G LG
Sbjct: 332 RGDHGRLG 339
>gi|390600679|gb|EIN10074.1| RCC1/BLIP-II [Punctularia strigosozonata HHB-11173 SS5]
Length = 435
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 161/338 (47%), Gaps = 43/338 (12%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEF------IPQTVNLPKKAVQIS 126
V GG HT+ + E GKV++ G ND +LGR ++G SE+ + V +A +I
Sbjct: 66 VAAGGFHTLVIDEAGKVWSCGVNDNASLGRPSDGLPSEYTELLAPLQLLVEAGFRATRIV 125
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADH 183
AGD+ S A+ G AWG+FR S G Q P +E + + ++A+G H
Sbjct: 126 AGDTISAAVDSQGEFRAWGTFRSSEGRCAFSPHVERQHVPALVERLENTMVSQVAAGNQH 185
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV- 242
V+LT+ G++ T G E GQL R A R + P ++ L R+ V G
Sbjct: 186 LVVLTAAGDVYTMGFGEDGQLARRII------AGRELQGTVPEKIVLGRRSRKAVVVGSG 239
Query: 243 --YNTFISSKGSILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKF-----T 294
++ + ++G++ +G+N+ + G D+EV S P + LS + T
Sbjct: 240 ENHSFAVDTEGTVWGWGINSNGRTGTGIDAEVVPS-------PQRVAGLSKDELDGATVT 292
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGL-----------KNVSEPVTEPTPIPSLQD 343
+ GQ H+L L S+G++YA G + GRLGL + + + PT + +
Sbjct: 293 SITGGQQHTLFLTSDGRVYACGLSEEGRLGLPPHHPALMDPNRRSTHFLDTPTQVTFPYN 352
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
I IACG SFAID+E +Y WG +LG G E
Sbjct: 353 ARIRYIACGTHCSFAIDTESAMYSWGRQVTGELGLGSE 390
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 172/420 (40%), Gaps = 96/420 (22%)
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
W R + GS G G G++ +A+G H +++ G + + G +
Sbjct: 46 WVDERIADGSFGEPGAGLEA-------------VAAGGFHTLVIDEAGKVWSCGVNDNAS 92
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGVYNTFISSKGSILAFGLNNY 261
LGR + S L P ++ ++ + V + + S+G A+G
Sbjct: 93 LGRPSDGLPSEY----TELLAPLQLLVEAGFRATRIVAGDTISAAVDSQGEFRAWGTFRS 148
Query: 262 SQLGEADSEVQKSGNTCFFTPH--------LIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
S+ C F+PH L++ L + + +A+G H + L + G +Y
Sbjct: 149 SE------------GRCAFSPHVERQHVPALVERLENTMVSQVAAGNQHLVVLTAAGDVY 196
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPS-----LQDKTITSIACGNCVSFAIDSEGVLYGW 368
G + G+L + ++ + T +P + + + G SFA+D+EG ++GW
Sbjct: 197 TMGFGEDGQLARRIIAGRELQGT-VPEKIVLGRRSRKAVVVGSGENHSFAVDTEGTVWGW 255
Query: 369 GMGNGYQLGNGKEDDI--------------------------------LNSEGKIYAFGR 396
G+ + + G G + ++ L S+G++YA G
Sbjct: 256 GINSNGRTGTGIDAEVVPSPQRVAGLSKDELDGATVTSITGGQQHTLFLTSDGRVYACGL 315
Query: 397 HDYGRLGL-----------KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+ GRLGL + + + PT + + I IACG SFAID+E +Y
Sbjct: 316 SEEGRLGLPPHHPALMDPNRRSTHFLDTPTQVTFPYNARIRYIACGTHCSFAIDTESAMY 375
Query: 446 GWG------MGNGYQLGNGKED-DILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
WG +G G +L + D D+L P ++ ++ ++ V+ GGQH+V L + K N
Sbjct: 376 SWGRQVTGELGLGSELALAETDRDVLTPREVV-RRAGSWITEAVSCGGQHAVALLRRKDN 434
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 21/279 (7%)
Query: 48 GQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA 105
G+ P V + ALVE L+N V +V G H V LT G VYT G ++G L R
Sbjct: 151 GRCAFSPHVERQHVPALVERLENTMVSQVAAGNQHLVVLTAAGDVYTMGFGEDGQLARRI 210
Query: 106 EGDSEF---IPQTVNL---PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE 159
E +P+ + L +KAV + +G++HS A+ +GTV+ WG + G+ E
Sbjct: 211 IAGRELQGTVPEKIVLGRRSRKAVVVGSGENHSFAVDTEGTVWGWGINSNGRTGTGIDAE 270
Query: 160 GIQKTPLKLESVSG-------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+ +P ++ +S + I G H + LTS G + G E+G+LG A
Sbjct: 271 -VVPSPQRVAGLSKDELDGATVTSITGGQQHTLFLTSDGRVYACGLSEEGRLGLPPHHPA 329
Query: 213 SRNA-RRGMSFLE-PGEVPLK-RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ RR FL+ P +V I + G + +F I ++ ++ ++G +LG
Sbjct: 330 LMDPNRRSTHFLDTPTQVTFPYNARIRYIACGTHCSFAIDTESAMYSWGRQVTGELGLGS 389
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLAS-GQHHSLAL 306
+ TP + + T S G H++AL
Sbjct: 390 ELALAETDRDVLTPREVVRRAGSWITEAVSCGGQHAVAL 428
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVED-LD--NVVEVVVGGMHTVCLTEDGK 89
G V G G+ G G D ++ L +D LD V + G HT+ LT DG+
Sbjct: 250 GTVWGWGINSNGRTGTGIDAEVVPSPQRVAGLSKDELDGATVTSITGGQQHTLFLTSDGR 309
Query: 90 VYTWGCNDEGALGREA---------EGDSEFI--PQTVNLPKKA--VQISAGDSHSVALL 136
VY G ++EG LG + F+ P V P A I+ G S A+
Sbjct: 310 VYACGLSEEGRLGLPPHHPALMDPNRRSTHFLDTPTQVTFPYNARIRYIACGTHCSFAID 369
Query: 137 EDGTVYAWGSFRDSHGSMGLKGE 159
+ +Y+WG R G +GL E
Sbjct: 370 TESAMYSWG--RQVTGELGLGSE 390
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 168/350 (48%), Gaps = 29/350 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + V +V G HTV + +DG VYT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFAN-KKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CND G LG E Q V L + V +S G++H++AL + G VY+WG DS G
Sbjct: 60 CNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG--LDSDGQ 115
Query: 154 MGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 116 LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 176 KKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 229 DR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 331 PVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 282 EIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 156/361 (43%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + ++G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------EYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 36/300 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY+WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 112 SDGQLG--LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 -----NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 276 HNSTSHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P ++KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A++ +G +Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG- 109
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L+S+G++ G +Y R+ P I SL D I +AC
Sbjct: 110 --------------LDSDGQLGLLGSEEYIRV-----------PRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 168/350 (48%), Gaps = 29/350 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + V +V G HTV + +DG VYT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFAN-KKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CND G LG E Q V L + V +S G++H++AL + G VY+WG DS G
Sbjct: 60 CNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG--LDSDGQ 115
Query: 154 MGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 116 LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 176 KKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 229 DR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 331 PVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 282 EIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 156/361 (43%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + ++G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLLGSE------EYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 36/300 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY+WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG G E+I N+ + VQ++ G HS+AL + V+ WG ++ +G
Sbjct: 112 SDGQLG--LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYG 167
Query: 153 SMGLKGEGI----QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+GL GI Q +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 168 QLGL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 -----NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 276 HNSTSHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P ++KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A++ +G +Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG- 109
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L+S+G++ G +Y R+ P I SL D I +AC
Sbjct: 110 --------------LDSDGQLGLLGSEEYIRV-----------PRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGN-GKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 188/438 (42%), Gaps = 90/438 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
VL G G+ GQLGLG ++ ++ + +V+ L NVV VV G +++ + EDG+++TWG N
Sbjct: 7 VLAWGAGEDGQLGLG-NLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E P V K VQ + G H +A+ E+G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGG--NEYGQC 123
Query: 155 GL---------KGEG--IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
KGE + + + + + +A+G H V+LT G++ T G P
Sbjct: 124 AEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWGQPWP-- 181
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLN 259
G I Q S VP++ + +++V +N + G + A+G N
Sbjct: 182 PGDIKQIS----------------VPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNN 225
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
Y QLG D++ + S P +K L+ +A+G HS+AL +G +Y +GR +
Sbjct: 226 EYGQLGTGDTQPRSS-------PVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGE 278
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+GRLG + P + L + + ++CG S A
Sbjct: 279 HGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAA-------------------- 318
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTPIPSLQDKTITS--------- 427
G++++FGR D+GRLG PV P + I S
Sbjct: 319 ------TISGRMFSFGRGDHGRLGYGGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTR 372
Query: 428 -----IACGNCVSFAIDS 440
+ACG + A+ S
Sbjct: 373 WVVKLVACGGRHALAVAS 390
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 180/434 (41%), Gaps = 81/434 (18%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG D + + L V + AG +S+A+ EDG ++ WG
Sbjct: 7 VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWG--W 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + TP ++++++ IV+ A G H + + G G E GQ
Sbjct: 65 NQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCA 124
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTFISSKGSILAFGLNNYS 262
Q +N +G S + ++ + ++ + G ++ ++ +G + +G
Sbjct: 125 EEQQTKEQQN--KGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWGQP--- 179
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSD-------KKFTMLASGQHHSLALNSEGKIYAF 315
+ P IK +S + TM+A G H+LAL G+++A+
Sbjct: 180 -----------------WPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAW 222
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G ++YG+LG + ++P + P P+ L + IA G S A+ +G +YGW
Sbjct: 223 GNNEYGQLGTGD-TQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGW------- 274
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
GR ++GRLG + P + L + + ++CG S
Sbjct: 275 -------------------GRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHS 315
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI----------------EGKQLNNYTV 479
A G ++ +G G+ +LG G P+++ E + V
Sbjct: 316 VAATISGRMFSFGRGDHGRLGYGGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTRWVV 375
Query: 480 LQVASGGQHSVILA 493
VA GG+H++ +A
Sbjct: 376 KLVACGGRHALAVA 389
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 36/197 (18%)
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ S + A+G + G+LGL N+ + + +L+D + S+ G+ S AI +G L
Sbjct: 1 MASRTCVLAWGAGEDGQLGLGNLQDK-DSVCVVDALRDHNVVSVVAGSRNSLAICEDGRL 59
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ WG + G LG ++ + P+ + +L + I
Sbjct: 60 FTWGW--------------------------NQRGTLGHPPETKTESTPSQVKALANVKI 93
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN-NYTVLQ--- 481
A G A+D EG Y WG GN Y ++ + K E K L+ + T+ Q
Sbjct: 94 VQAAIGGWHCLAVDEEGRTYAWG-GNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCA 152
Query: 482 ----VASGGQHSVILAK 494
VA+GG HSV+L +
Sbjct: 153 PRLCVAAGGTHSVVLTE 169
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D + V L + VV+V GG H+V T G+++++G
Sbjct: 269 GAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFG 328
Query: 95 CNDEGALG 102
D G LG
Sbjct: 329 RGDHGRLG 336
>gi|154292059|ref|XP_001546607.1| hypothetical protein BC1G_14404 [Botryotinia fuckeliana B05.10]
Length = 614
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 178/403 (44%), Gaps = 68/403 (16%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+ G + G+LGLG D + R VV++V GGMH LT+D K+ TWG
Sbjct: 197 IYVFGCNEAGELGLGLQTKKDTINRPVKNPALTARGVVQMVAGGMHGAALTKDNKILTWG 256
Query: 95 CNDEGALGR------------EAEGDS-----------EFIPQTV---NLPKKAV--QIS 126
D ALGR +AE D E P V N+P+ + QI+
Sbjct: 257 VADGLALGRKTDDWVAPERDADAESDDESAAADARNPLESTPGEVDLTNVPEDTIFTQIT 316
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHF 184
AGD+ + AL DG VY WGS R + G MG + +++T P+ + + IVK+A+G +H+
Sbjct: 317 AGDNATYALTNDGLVYGWGSIRGADGPMGFTKD-VKETLVPILIPGLKNIVKLAAGNNHY 375
Query: 185 VMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L ++G + G E QLG RI +RS ++ L P E L + + D+F G
Sbjct: 376 LALNNKGAVFAWGAGEHNQLGRRIVERSR-------LNALVPREFGLPKAMV-DIFCGSE 427
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN---TCFFTPHLIKSLSDKKFTMLASG 299
++F I G++ ++G NN Q G + K G T + L DK M+A+G
Sbjct: 428 HSFAIHKNGTVYSWGANNMGQCG----QFSKDGTLTEEVTSTATKVSILKDKNIKMMAAG 483
Query: 300 QHHSLALNSEGKIYAFGR-------HDYGRL-------GLKNVSEPVTEPTPIPSLQDKT 345
SLAL EG++ FG+ HD L +N + P P +
Sbjct: 484 NASSLALTHEGEVLYFGKAQDGLSGHDVEALPEDVIIRNERNQRSIIKTPLTFPF--KGS 541
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
++ + + D Y WG Q G + D+ +E
Sbjct: 542 YIAMGSDHSIVLGPDGHSPHYSWGFNTYRQTGLEDDQDVYIAE 584
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 165/431 (38%), Gaps = 89/431 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLL 194
+Y +G + G +GL K + I + P+K +++ G+V++ +G H LT +L
Sbjct: 197 IYVFGC--NEAGELGLGLQTKKDTINR-PVKNPALTARGVVQMVAGGMHGAALTKDNKIL 253
Query: 195 TAGCPEQGQLGRITQ---------------RSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
T G + LGR T SA+ +AR + PGEV L D +F
Sbjct: 254 TWGVADGLALGRKTDDWVAPERDADAESDDESAAADARNPLEST-PGEVDLTNVPEDTIF 312
Query: 240 TGVYNTFISSKGSILAFGLNN------YSQLGEADSEVQKSGNTC-FFTPHLIKSLSDKK 292
T + + G + L N + + AD + + + P LI L K
Sbjct: 313 TQI------TAGDNATYALTNDGLVYGWGSIRGADGPMGFTKDVKETLVPILIPGL--KN 364
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIAC 351
LA+G +H LALN++G ++A+G ++ +LG + V + P K + I C
Sbjct: 365 IVKLAAGNNHYLALNNKGAVFAWGAGEHNQLGRRIVERSRLNALVPREFGLPKAMVDIFC 424
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE----------------------- 388
G+ SFAI G +Y WG N Q G +D L E
Sbjct: 425 GSEHSFAIHKNGTVYSWGANNMGQCGQFSKDGTLTEEVTSTATKVSILKDKNIKMMAAGN 484
Query: 389 ---------GKIYAFGR-------HDYGRL-------GLKNVSEPVTEPTPIPSLQDKTI 425
G++ FG+ HD L +N + P P +
Sbjct: 485 ASSLALTHEGEVLYFGKAQDGLSGHDVEALPEDVIIRNERNQRSIIKTPLTFPF--KGSY 542
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
++ + + D Y WG Q G + D+ ++E K + ++ A G
Sbjct: 543 IAMGSDHSIVLGPDGHSPHYSWGFNTYRQTGLEDDQDVYIAEELENKNIEGKKLVWAAGG 602
Query: 486 GQHSVILAKPK 496
GQ S + A P+
Sbjct: 603 GQFSFLAAIPE 613
>gi|388582263|gb|EIM22568.1| RCC1/BLIP-II [Wallemia sebi CBS 633.66]
Length = 581
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 186/439 (42%), Gaps = 103/439 (23%)
Query: 38 VVLTCGQGDTGQLGLGPDVM----ERKTFALVEDL--------DNVVEVVVGGMHTVCLT 85
+L G GD GQ GLG D + + VED + V ++ GGMH + +
Sbjct: 85 TLLVFGTGDFGQFGLGVDTLGEIKRPRIHQWVEDAIEDDELGPEGVEQIAAGGMHNLMID 144
Query: 86 EDGKVYTWGCNDEGALGR-------EAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALL 136
+GK+++WG ND +LGR EAE + E +P V+ +AV I+AGD S+A+
Sbjct: 145 SNGKIWSWGVNDGMSLGRVTADTGVEAE-ELETVPMKVDGLDDFRAVNIAAGDYISLAID 203
Query: 137 EDGTVYAWGSFRDSHGSMGLKGE--GIQK--TPLKLESVSG--IVKIASGADHFVMLTSR 190
E+G + AWGSF + G +G G G +K P L ++ +V+ GADH + LT+
Sbjct: 204 EEGQMRAWGSFNSNDGLLGFDGRPGGARKQVKPAVLPQLAKHRVVQAVCGADHALALTTS 263
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISS 249
G + G +Q QLGR RR ++ L P PL ++I V TG Y++F I
Sbjct: 264 GIVYAWGNGQQQQLGRRVIE------RRKLNGLTP--EPLHIRNIVAVGTGSYHSFAIDK 315
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL-----SDKKFTMLASGQHHSL 304
G + +GLN Q G +D TP I +L + ++ G+HH+L
Sbjct: 316 DGVVFGWGLNKMRQTGVSDERDGYEDTIAVPTP--IDALHPDNHDGSRVIQISGGEHHTL 373
Query: 305 ALNSEGKIYAFGRHDYGRLGLKN------------------------------------- 327
L G+++ GR D LGL
Sbjct: 374 FLFDNGEVWGCGRCDGKELGLSKDHPAYKEILENNEKTAQEAREEKAKKQGTSIEETEAP 433
Query: 328 -------VSEPVTEPTPIPSLQDK---------------TITSIACGNCVSFAIDSEGVL 365
V +PV P P +D+ I I+ G + A+ +G +
Sbjct: 434 KTIADEFVEQPVRIQFPPPPTEDEPNPENTPYESGSSKTKIKQISAGLRHNLAVSDQGYV 493
Query: 366 YGWGMGNGYQLGNGKEDDI 384
Y WG GN QLG G + I
Sbjct: 494 YSWGYGNACQLGQGNAETI 512
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G++N I S G I ++G+N+ LG ++ P + L D + +A+G
Sbjct: 137 GMHNLMIDSNGKIWSWGVNDGMSLGRVTADTGVEAEELETVPMKVDGLDDFRAVNIAAGD 196
Query: 301 HHSLALNSEGKIYAFGRHDY--GRLGLKNV---SEPVTEPTPIPSLQDKTITSIACGNCV 355
+ SLA++ EG++ A+G + G LG + +P +P L + CG
Sbjct: 197 YISLAIDEEGQMRAWGSFNSNDGLLGFDGRPGGARKQVKPAVLPQLAKHRVVQAVCGADH 256
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
+ A+ + G++Y WG G QLG R R L + T
Sbjct: 257 ALALTTSGIVYAWGNGQQQQLG------------------RRVIERRKLNGL-------T 291
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-----NGKEDDILEPMKIE 470
P P L + I ++ G+ SFAID +GV++GWG+ Q G +G ED I P I+
Sbjct: 292 PEP-LHIRNIVAVGTGSYHSFAIDKDGVVFGWGLNKMRQTGVSDERDGYEDTIAVPTPID 350
Query: 471 GKQLNNY---TVLQVASGGQHSVIL 492
+N+ V+Q++ G H++ L
Sbjct: 351 ALHPDNHDGSRVIQISGGEHHTLFL 375
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
G+ +IA+G H +M+ S G + + G + LGR+T A G+ E VP+K
Sbjct: 129 GVEQIAAGGMHNLMIDSNGKIWSWGVNDGMSLGRVT-------ADTGVEAEELETVPMKV 181
Query: 233 KHIDD-----VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
+DD + G Y + I +G + A+G N S G + + G P ++
Sbjct: 182 DGLDDFRAVNIAAGDYISLAIDEEGQMRAWGSFN-SNDGLLGFDGRPGGARKQVKPAVLP 240
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKT 345
L+ + G H+LAL + G +YA+G +LG + + + TP P L +
Sbjct: 241 QLAKHRVVQAVCGADHALALTTSGIVYAWGNGQQQQLGRRVIERRKLNGLTPEP-LHIRN 299
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
I ++ G+ SFAID +GV++GWG+ Q G E D
Sbjct: 300 IVAVGTGSYHSFAIDKDGVVFGWGLNKMRQTGVSDERD---------------------- 337
Query: 406 NVSEPVTEPTPIPSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+ + PTPI +L + I+ G + + G ++G G +G +LG K+
Sbjct: 338 GYEDTIAVPTPIDALHPDNHDGSRVIQISGGEHHTLFLFDNGEVWGCGRCDGKELGLSKD 397
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 38/207 (18%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIPSLQDKTITSIAC 351
L+ NS + FG D+G+ GL + + V + L + + IA
Sbjct: 76 QKLSTNSLRTLLVFGTGDFGQFGLGVDTLGEIKRPRIHQWVEDAIEDDELGPEGVEQIAA 135
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G + IDS G ++ WG+ +G LG D + +E E
Sbjct: 136 GGMHNLMIDSNGKIWSWGVNDGMSLGRVTADTGVEAE--------------------ELE 175
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN------GYQLGNGKEDDILE 465
T P + L D +IA G+ +S AID EG + WG N G+ G ++
Sbjct: 176 TVPMKVDGLDDFRAVNIAAGDYISLAIDEEGQMRAWGSFNSNDGLLGFDGRPGGARKQVK 235
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVIL 492
P + QL + V+Q G H++ L
Sbjct: 236 PAVL--PQLAKHRVVQAVCGADHALAL 260
>gi|401826164|ref|XP_003887176.1| regulator of chromosome condensation domain-containing protein
[Encephalitozoon hellem ATCC 50504]
gi|392998334|gb|AFM98195.1| regulator of chromosome condensation domain-containing protein
[Encephalitozoon hellem ATCC 50504]
Length = 359
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 171/359 (47%), Gaps = 40/359 (11%)
Query: 39 VLTCGQGDTGQLGLGPD-----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G QLGLG D V R +F D ++ +V G +HT+ L +G +Y+W
Sbjct: 3 VFVFGSNAISQLGLGEDEGSTHVPTRLSFF---DGMSLTKVRCGSLHTLILDSEGTLYSW 59
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
GCNDEGALGR+ + E PQ V L +K V + G S S AL G VY WG+FR ++G+
Sbjct: 60 GCNDEGALGRDGD---ESTPQKVCLGEKIVDMDCGASISAALTSSGHVYVWGTFRSTNGA 116
Query: 154 MGLK-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL E I P+K+ + I +++G + L S+ + T G E G+LGR R++
Sbjct: 117 FGLTPKESISFIPIKV-PLKNIQTLSAGQNFIAALDSKNAIFTFGSNEFGELGR---RTS 172
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDV-FTGV---YNTFIS--SKGSILAFGLNNYSQLGE 266
RN R L P V R+ + + F V N I+ + +G N Y QLG
Sbjct: 173 ERNKLRA---LIPDAVTTPRRRLQNYRFKSVGCGLNHLIALNTDEEAYCWGSNLYGQLGH 229
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+E F+ H + + +A G++HSL + +G +Y GR+ G+LG++
Sbjct: 230 DKAEST-------FSKHKVPL---EGIIQVAGGENHSLFVTRDGCLYGCGRNKEGQLGIQ 279
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ +E + P + + + S N + LY WG G LG+ +E L
Sbjct: 280 S-TESIRSPVRLGLYGVEAVRSYNSFNICKIGNE----LYSWGTGFNGALGHEEETLFL 333
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 53/278 (19%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
S+ FG N SQLG + E G+T P + T + G H+L L+SEG
Sbjct: 2 SVFVFGSNAISQLGLGEDE----GST--HVPTRLSFFDGMSLTKVRCGSLHTLILDSEGT 55
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG-- 369
+Y++G +D G LG E TP + I + CG +S A+ S G +Y WG
Sbjct: 56 LYSWGCNDEGALGRDG-----DESTPQKVCLGEKIVDMDCGASISAALTSSGHVYVWGTF 110
Query: 370 -----------------------MGNGYQLGNGKED-DILNSEGKIYAFGRHDYGRLGLK 405
+ N L G+ L+S+ I+ FG +++G LG +
Sbjct: 111 RSTNGAFGLTPKESISFIPIKVPLKNIQTLSAGQNFIAALDSKNAIFTFGSNEFGELGRR 170
Query: 406 NVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
P TP LQ+ S+ CG A++++ Y WG QLG+
Sbjct: 171 TSERNKLRALIPDAVTTPRRRLQNYRFKSVGCGLNHLIALNTDEEAYCWGSNLYGQLGHD 230
Query: 459 KEDDILEPMKI--EGKQLNNYTVLQVASGGQHSVILAK 494
K + K+ EG ++QVA G HS+ + +
Sbjct: 231 KAESTFSKHKVPLEG-------IIQVAGGENHSLFVTR 261
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 70/368 (19%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
+V+ +GS S +G + EG P +L G + K+ G+ H ++L S G L + G
Sbjct: 2 SVFVFGSNAISQLGLG-EDEGSTHVPTRLSFFDGMSLTKVRCGSLHTLILDSEGTLYSWG 60
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
C ++G LGR S P +V L K +D + ++S G + +G
Sbjct: 61 CNDEGALGRDGDEST------------PQKVCLGEKIVDMDCGASISAALTSSGHVYVWG 108
Query: 258 LNNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD-----KKFTMLASGQHHSLALNSEGK 311
+S N F TP S K L++GQ+ AL+S+
Sbjct: 109 -------------TFRSTNGAFGLTPKESISFIPIKVPLKNIQTLSAGQNFIAALDSKNA 155
Query: 312 IYAFGRHDYGRLGLKNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
I+ FG +++G LG + P TP LQ+ S+ CG A++++
Sbjct: 156 IFTFGSNEFGELGRRTSERNKLRALIPDAVTTPRRRLQNYRFKSVGCGLNHLIALNTDEE 215
Query: 365 LYGWGMGNGYQLGNGKEDD-----------------------ILNSEGKIYAFGRHDYGR 401
Y WG QLG+ K + + +G +Y GR+ G+
Sbjct: 216 AYCWGSNLYGQLGHDKAESTFSKHKVPLEGIIQVAGGENHSLFVTRDGCLYGCGRNKEGQ 275
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LG+++ +E + P + + + S N + LY WG G LG+ +E+
Sbjct: 276 LGIQS-TESIRSPVRLGLYGVEAVRSYNSFNICKIGNE----LYSWGTGFNGALGH-EEE 329
Query: 462 DILEPMKI 469
+ P +I
Sbjct: 330 TLFLPKRI 337
>gi|392575264|gb|EIW68398.1| hypothetical protein TREMEDRAFT_32149 [Tremella mesenterica DSM
1558]
Length = 595
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 164/336 (48%), Gaps = 59/336 (17%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALV-----EDLDN------------VVEVVVGGMH 80
+ G GD GQ GLGPD ++ + + E +++ + V GGMH
Sbjct: 101 ALFIFGTGDMGQFGLGPDELDEISRPKLHTWFEEQIEDGHLARSGSSGGGLETVACGGMH 160
Query: 81 TVCLTEDGKVYTWGCNDEGALGR---------EAEG-----DSEFIPQTV-NLPK---KA 122
T+ + E G+V +WG ND ALGR + E D E P V +L K +A
Sbjct: 161 TLAIDEAGRVRSWGINDNAALGRITTDVKDPNDPESVIPNEDLETYPFVVESLEKEGFRA 220
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVS--GIVK 176
VQ++AGDS SVA+ + G + AWGSFR + G +G G Q P+ L S++ I
Sbjct: 221 VQVAAGDSVSVAVSDKGELRAWGSFRSNDGILGFDGVPNHSPFQYHPISLPSLAKIKITS 280
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
++ GADH + L G++ G +Q QLGR RR ++ LEP + L + I
Sbjct: 281 VSCGADHVLALAITGHVYVWGNGQQNQLGRRIIE------RRKLNGLEPERLGL--RGIV 332
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDK--- 291
V G+Y++F + + G++ A+GLN + Q G + QK G P ++ +LS
Sbjct: 333 HVSAGMYHSFAVGTDGTVWAWGLNTFHQTGISS---QKGGEEEMINQPTIVDALSPNNLG 389
Query: 292 --KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
K ++ G+HHSL L S G + GR D LGL
Sbjct: 390 GAKVVSISGGEHHSLFLLSNGDVLGCGRCDANELGL 425
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 49/275 (17%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH--------LIKSLSDKK 292
G++ I G + ++G+N+ + LG ++V+ + P+ +++SL +
Sbjct: 158 GMHTLAIDEAGRVRSWGINDNAALGRITTDVKDPNDPESVIPNEDLETYPFVVESLEKEG 217
Query: 293 F--TMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNV---SEPVTEPTPIPSLQDKT 345
F +A+G S+A++ +G++ A+G R + G LG V S P +PSL
Sbjct: 218 FRAVQVAAGDSVSVAVSDKGELRAWGSFRSNDGILGFDGVPNHSPFQYHPISLPSLAKIK 277
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
ITS++CG A+ G +Y WG G QLG I+ K+ + RLGL+
Sbjct: 278 ITSVSCGADHVLALAITGHVYVWGNGQQNQLGR----RIIERR-KLNGL---EPERLGLR 329
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-----NGKE 460
I ++ G SFA+ ++G ++ WG+ +Q G G+E
Sbjct: 330 G------------------IVHVSAGMYHSFAVGTDGTVWAWGLNTFHQTGISSQKGGEE 371
Query: 461 DDILEPMKIEGKQLNNY---TVLQVASGGQHSVIL 492
+ I +P ++ NN V+ ++ G HS+ L
Sbjct: 372 EMINQPTIVDALSPNNLGGAKVVSISGGEHHSLFL 406
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 98/267 (36%), Gaps = 71/267 (26%)
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQD 343
+ ++ +L + S A+ N ++ FG D G+ GL +S P ++D
Sbjct: 79 ESQYHILILSRADSTAISNPHKALFIFGTGDMGQFGLGPDELDEISRPKLHTWFEEQIED 138
Query: 344 KTIT----------SIACGNCVSFAIDSEGVLYGWGMGNGYQLG---------NGKEDDI 384
+ ++ACG + AID G + WG+ + LG N E I
Sbjct: 139 GHLARSGSSGGGLETVACGGMHTLAIDEAGRVRSWGINDNAALGRITTDVKDPNDPESVI 198
Query: 385 LNSEGKIYAF-----------------------GRHDYGRL----------------GLK 405
N + + Y F D G L G+
Sbjct: 199 PNEDLETYPFVVESLEKEGFRAVQVAAGDSVSVAVSDKGELRAWGSFRSNDGILGFDGVP 258
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
N S P +PSL ITS++CG A+ G +Y WG G QLG I+E
Sbjct: 259 NHSPFQYHPISLPSLAKIKITSVSCGADHVLALAITGHVYVWGNGQQNQLGR----RIIE 314
Query: 466 PMKIEG---KQLNNYTVLQVASGGQHS 489
K+ G ++L ++ V++G HS
Sbjct: 315 RRKLNGLEPERLGLRGIVHVSAGMYHS 341
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 66 EDLDNVVEVVVGGM-HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN----LPK 120
E +N + V+ G H + ++E G VY WG ++ LG A+ + +P V P
Sbjct: 516 ESSNNPISVISAGTRHNLAVSESGHVYAWGFGNQAQLGLGADVEQAIVPTLVRSKQLRPY 575
Query: 121 KAVQISAGDSHSVALLE 137
K V SAG H V L +
Sbjct: 576 KTVGASAGGQHCVLLAQ 592
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 187/405 (46%), Gaps = 33/405 (8%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVV 75
+KV + S G VV + G+G+ GQLG G D +R ++ L++ + V
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHG-DAEDRLLPRIIGALNDCEISLVA 63
Query: 76 VGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHS 132
G HT + +Y+WG D G LG D F+P + + + QI+ GDSH
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL-FVPHPIKALQGLEIRQIACGDSHC 122
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHFVMLTSR 190
+A+ DG VY+WG R+ +G +GL P KL + G+ VK +A+GA+H +T
Sbjct: 123 LAVTADGEVYSWG--RNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDS 180
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-IS 248
G L G G LG RG L P EVP + + + V G +T +S
Sbjct: 181 GKLYGWGWGRYGNLGL---------GDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVS 230
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + +G + Y QLG D PH + +L++ T ++ G H++AL
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADH-------LLPHQVAALAEFNITQVSGGWRHTVALTE 283
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
GK+Y +G + +G++G +V + + + IP Q + + ++CG + A+ + +Y
Sbjct: 284 AGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG-QHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
WG G QLG+G D +G I A GL+ EP
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPKG-IQALSADGSACEGLEKSPEPAV 386
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 38/269 (14%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG-K 311
+ +FG QLG D+E + P +I +L+D + +++A G H+ A ++
Sbjct: 26 VCSFGRGEDGQLGHGDAEDR-------LLPRIIGALNDCEISLVACGADHTTAYSATRLT 78
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
IY++G D+GRLG N S+ P PI +LQ I IACG+ A+ ++G +Y WG
Sbjct: 79 IYSWGWGDFGRLGHGNSSDLFV-PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRN 137
Query: 372 NGYQLGNGKEDDIL--------------------------NSEGKIYAFGRHDYGRLGLK 405
QLG G DD L GK+Y +G YG LGL
Sbjct: 138 QNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLG 197
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ + + P +P++ D+ + +ACG + A+ G LY +G QLG+G D L
Sbjct: 198 DRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLL 256
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P ++ L + + QV+ G +H+V L +
Sbjct: 257 PHQV--AALAEFNITQVSGGWRHTVALTE 283
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 47/347 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ +++GA H V L S + + G E GQLG + R R + L E+ L
Sbjct: 7 VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGH--GDAEDRLLPRIIGALNDCEISLVAC 64
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
D + +++ +I ++G ++ +LG +S + F PH IK+L +
Sbjct: 65 GADHT-----TAYSATRLTIYSWGWGDFGRLGHGNS-------SDLFVPHPIKALQGLEI 112
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A G H LA+ ++G++Y++GR+ G+LGL + + + P + + + ++ +A G
Sbjct: 113 RQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLAFEGVSVKMLAAGA 171
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNS 387
+ A+ G LYGWG G LG G D ++
Sbjct: 172 EHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQ 231
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
GK+Y +G YG+LG + ++ + P + +L + IT ++ G + A+ G LYGW
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEAGKLYGW 290
Query: 448 GMGNGYQLGNGKEDDILEP--MKIEGKQLNNYTVLQVASGGQHSVIL 492
G Q+G+G DD P + I G+ + V+QV+ G +H+V +
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISIPGQ---HQRVVQVSCGWRHTVAV 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 167/384 (43%), Gaps = 55/384 (14%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKI 177
+K + +SAG SH+VALL V ++G D G +G + P + +++ I +
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGED--GQLGHGDAEDRLLPRIIGALNDCEISLV 62
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR----NARRGMSFLEPGEVPLKRK 233
A GADH ++ LT G GR+ ++S + + + LE ++
Sbjct: 63 ACGADHTTAYSA--TRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDS 120
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
H +++ G + ++G N QLG D++ PH + +
Sbjct: 121 HC---------LAVTADGEVYSWGRNQNGQLGLGDTDDS-------LVPHKLLAFEGVSV 164
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
MLA+G H+ A+ GK+Y +G YG LGL + + + P +P++ D+ + +ACG
Sbjct: 165 KMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGW 223
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNS 387
+ A+ G LY +G QLG+G D L
Sbjct: 224 RHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE 283
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
GK+Y +G + +G++G +V + + + IP Q + + ++CG + A+ + +Y
Sbjct: 284 AGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG-QHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 447 WGMGNGYQLGNGKEDDILEPMKIE 470
WG G QLG+G D P I+
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPKGIQ 366
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++K ++++G H++AL S + +FGR + G+LG + + + P I +L D I+ +
Sbjct: 4 ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLL-PRIIGALNDCEISLV 62
Query: 350 ACGNCVSFAIDSEGV-LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
ACG + A + + +Y WG G D+GRLG N S
Sbjct: 63 ACGADHTTAYSATRLTIYSWGWG--------------------------DFGRLGHGNSS 96
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P PI +LQ I IACG+ A+ ++G +Y WG QLG G DD L P K
Sbjct: 97 DLFV-PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHK 155
Query: 469 IEGKQLNNYTVLQVASGGQHSVIL 492
+ +V +A+G +H+ +
Sbjct: 156 L--LAFEGVSVKMLAAGAEHTAAV 177
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 173/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + NV +V G HT + +DG VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFIN-KNVRDVGCGNRHTGFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CND G LG + S P+ V + V +S G++H++AL + G V++WG +HG
Sbjct: 60 CNDLGQLGHDK---SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG--HAAHG 114
Query: 153 SMGLK-GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G+ E + P ++S+S IV++A G H + L+ N+ + G + GQLG ++
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ R S +P HI G ++ ++ G+I +G N + QLG D
Sbjct: 175 KRKESAPRHIKSL---SGIPF--AHI--AAGGGHSFALTISGAIFGWGRNKFGQLGLND- 226
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E +S P L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 227 ETDRSD------PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
V P + L +T IACG + A + S G +Y +G+G QLG G
Sbjct: 281 HEVN-PRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIG 330
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 166/393 (42%), Gaps = 67/393 (17%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E + P + + + + G H + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+ GQLG R +P +V L + I V G +T ++ KG + ++
Sbjct: 61 NDLGQLGHDKSRK------------KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSW 108
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + Q+G + +E P IKSLSD + +A G HHSLAL+ E IY++G
Sbjct: 109 GHAAHGQIGVSIAE------DYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG 162
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ YG+LGL + + P I SL IA G SFA+ G ++GWG QL
Sbjct: 163 QNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D L EG ++ FG YG+LG + S
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G +Y +G+G QLG G + P +
Sbjct: 283 VN-PRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341
Query: 470 EGKQLNN-------------YTVLQVASGGQHS 489
+G L + Y V ++ SGG S
Sbjct: 342 KGNWLTHEDYVRRLPEANGCYCVKRIYSGGDQS 374
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD +V V G HT+ L + G+V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHDK---SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G +G D +P+ + + VQ++ G HS+AL ++ +Y+WG ++ +G
Sbjct: 110 HAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG--QNQYG 167
Query: 153 SMGLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E +++ P ++S+SGI IA+G H LT G + G + GQLG +
Sbjct: 168 QLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE 227
Query: 210 RSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGE- 266
S +P + L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 228 TDRS----------DPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 267 -ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
A EV P + L T +A G+ H+LA S G+IY+FG G+LG
Sbjct: 278 SASHEV---------NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Query: 325 LKNVS 329
+ + S
Sbjct: 329 IGSTS 333
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP +K + + CGN + + +G +Y G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ QLG HD R +P + +L + I +++C
Sbjct: 61 NDLGQLG-------------------HDKSR----------KKPEQVGALDAQIIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG Q+G + ED I P I K L++ ++QVA G HS
Sbjct: 92 GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNI--KSLSDIQIVQVACGHHHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 173/387 (44%), Gaps = 76/387 (19%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTF-----ALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
VL G G+ GQLG+G ME K + AL VV VV G +++ + EDG+++T
Sbjct: 6 AVLAWGSGEDGQLGVGN--MEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFT 63
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N G LG E +E P V + K VQ + G H +A+ + G YAWG +
Sbjct: 64 WGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWGG--NE 121
Query: 151 HGSMGLKGEGIQ----------KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
+G G + E + P + + ++A+G H V+LT G++ T G P
Sbjct: 122 YGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVWTWGQPW 181
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAF 256
G I Q S P++ + +++V +N + +G + A+
Sbjct: 182 P--PGDIKQIS----------------TPVRVQGLENVQLIAVGAFHNLALLEEGEVWAW 223
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N Y QLG D++ + P ++ LS +A+G HS AL ++ ++YA+G
Sbjct: 224 GNNEYGQLGTGDTQPRSQ-------PVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWG 276
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
R ++GRLG + P + L +TI ++CG S A
Sbjct: 277 RGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVA------------------ 318
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLG 403
++G+I+++GR D+GRLG
Sbjct: 319 --------RTADGRIFSYGRADHGRLG 337
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 193/427 (45%), Gaps = 61/427 (14%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP---KKAVQISAGDSHSVALLEDGT 140
+ D V WG ++G LG D +++ L K+ V + AG +S+A+ EDG
Sbjct: 1 MESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60
Query: 141 VYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
++ WG + G++G E + TP +++++ IV+ A G H + + +G G
Sbjct: 61 LFTWG--WNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWG 118
Query: 198 CPEQGQLGRITQRS--ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
E GQ G +R S+ RR ++ + L+ + + G ++ ++ G +
Sbjct: 119 GNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQV--AAGGTHSVVLTHNGHVWT 176
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G ++++ TP ++ L + ++A G H+LAL EG+++A+
Sbjct: 177 WGQP------WPPGDIKQ-----ISTPVRVQGLEN--VQLIAVGAFHNLALLEEGEVWAW 223
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G ++YG+LG + ++P ++P P+ L + IA G S A
Sbjct: 224 GNNEYGQLGTGD-TQPRSQPVPVQGLSGLILADIAAGGWHSTA----------------- 265
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
L ++ ++YA+GR ++GRLG + P + L +TI ++CG S
Sbjct: 266 ---------LTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHS 316
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI---------EGKQLNNYTVLQVASGG 486
A ++G ++ +G + +LG G++ PM++ + + V VA GG
Sbjct: 317 VARTADGRIFSYGRADHGRLGYGRKVTTGHPMEVPIGIRPPKNAAENSGCWFVKLVACGG 376
Query: 487 QHSVILA 493
+H++ A
Sbjct: 377 RHTLATA 383
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 27/349 (7%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGC 95
V T G+G+ GQLGLG D ++ V+ L V ++ G HTV LT DG+V+TWG
Sbjct: 1 AVFTWGRGEDGQLGLG-DTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59
Query: 96 NDEGALGREAEGDSEFIPQ-TVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
D+G LG G +++P+ T +L + V Q++ G H+ A+ +G +Y WG +G
Sbjct: 60 GDDGRLGHGDNG-WKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGG--GMYGK 116
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G E TP ++E++ G + +IA G+ H ++T+ G L T G E G
Sbjct: 117 LGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENG--------V 168
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGSILAFGLNNYSQLGEADSE 270
A G +L + K + + G + ++ G + +G + +LG
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG----- 223
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
S C +P ++ + KK ++ G H+ ++ +G++Y FG ++G+LG +
Sbjct: 224 -HMSERNC-HSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVN 281
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+T PT + +L ++ I CG S A+ +G++Y WG G+ +LG+G
Sbjct: 282 KMT-PTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHG 329
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 170/386 (44%), Gaps = 51/386 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V+TWG ++G LG D + L VQ I+ G H+V L DG V+ WG R
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWG--R 59
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +G G + P +S++G ++++ G+ H +T G+L T G G+LG
Sbjct: 60 GDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGH 119
Query: 207 ITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
+ + R + ++ +H +++ G++ +G G
Sbjct: 120 GDEAGHATPKRVEALVGATVAQIACGSRH---------TAIVTASGALYTWGDKENGVAG 170
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
++E + + P L++S++ K+ +++ H+ + G+++ +G +GRLG
Sbjct: 171 HGETEGHQ------YLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG- 223
Query: 326 KNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++SE PT + + K ++CG G +
Sbjct: 224 -HMSERNCHSPTIVDYMVGKKPRQVSCG--------------------------GFHTAV 256
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
++ +G++Y FG ++G+LG + +T PT + +L ++ I CG S A+ +G++
Sbjct: 257 VSEDGRLYTFGGGEHGQLGHNDRVNKMT-PTFVEALDGMFVSQITCGWSHSVALTVKGLV 315
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIE 470
Y WG G+ +LG+G + P +E
Sbjct: 316 YTWGNGDHGKLGHGNGRKVAVPQAVE 341
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 138/299 (46%), Gaps = 28/299 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V T G+GD G+LG G + + R T +L + V++V G HT +T +G +YTW
Sbjct: 52 GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQI--VLQVTCGSYHTAAVTGNGDLYTW 109
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G G LG E P+ V + QI+ G H+ + G +Y WG +
Sbjct: 110 GGGMYGKLGHGDEA-GHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G + EG Q P LES++ + +I++ H ++T G L T G + G+LG +++
Sbjct: 169 AGHG-ETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSE 227
Query: 210 RSA-SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
R+ S M +P +V G + +S G + FG + QLG D
Sbjct: 228 RNCHSPTIVDYMVGKKPRQVSCG---------GFHTAVVSEDGRLYTFGGGEHGQLGHND 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
V K TP +++L + + G HS+AL +G +Y +G D+G+LG N
Sbjct: 279 -RVNK------MTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN 330
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 187/405 (46%), Gaps = 33/405 (8%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVV 75
+KV + S G VV + G+G+ GQLG G D +R ++ L++ + V
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHG-DAEDRHLPRIIGALNDCEISLVA 63
Query: 76 VGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHS 132
G HT + +Y+WG D G LG D F+P + + + QI+ GDSH
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL-FVPHPIKALQGLEIRQIACGDSHC 122
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHFVMLTSR 190
+A+ DG VY+WG R+ +G +GL P KL + G+ VK +A+GA+H +T
Sbjct: 123 LAVTADGEVYSWG--RNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDG 180
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-IS 248
G L G G LG RG L P EVP + + + V G +T +S
Sbjct: 181 GKLYGWGWGRYGNLGL---------GDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVS 230
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + +G + Y QLG D PH + +L++ T ++ G H++AL
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADH-------LLPHQVAALAEFNITQVSGGWRHTVALTE 283
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
GK+Y +G + +G++G +V + + + IP Q + + ++CG + A+ + +Y
Sbjct: 284 AGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG-QHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
WG G QLG+G D +G I A GL+ EP
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPKG-IQALSADGKACEGLEKSPEPAV 386
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 38/269 (14%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG-K 311
+ +FG QLG D+E + P +I +L+D + +++A G H+ A ++
Sbjct: 26 VCSFGRGEDGQLGHGDAEDRH-------LPRIIGALNDCEISLVACGADHTTAYSATRLT 78
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
IY++G D+GRLG N S+ P PI +LQ I IACG+ A+ ++G +Y WG
Sbjct: 79 IYSWGWGDFGRLGHGNSSDLFV-PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRN 137
Query: 372 NGYQLGNGKEDDIL--------------------------NSEGKIYAFGRHDYGRLGLK 405
QLG G DD L GK+Y +G YG LGL
Sbjct: 138 QNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLG 197
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ + + P +P++ D+ + +ACG + A+ G LY +G QLG+G D L
Sbjct: 198 DRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLL 256
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P ++ L + + QV+ G +H+V L +
Sbjct: 257 PHQV--AALAEFNITQVSGGWRHTVALTE 283
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 47/347 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ +++GA H V L S + + G E GQLG + R+ R + L E+ L
Sbjct: 7 VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGH--GDAEDRHLPRIIGALNDCEISLVAC 64
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
D + +++ +I ++G ++ +LG +S + F PH IK+L +
Sbjct: 65 GADHT-----TAYSATRLTIYSWGWGDFGRLGHGNS-------SDLFVPHPIKALQGLEI 112
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A G H LA+ ++G++Y++GR+ G+LGL + + + P + + + ++ +A G
Sbjct: 113 RQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLAFEGVSVKMLAAGA 171
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNS 387
+ A+ G LYGWG G LG G D ++
Sbjct: 172 EHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQ 231
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
GK+Y +G YG+LG + ++ + P + +L + IT ++ G + A+ G LYGW
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEAGKLYGW 290
Query: 448 GMGNGYQLGNGKEDDILEP--MKIEGKQLNNYTVLQVASGGQHSVIL 492
G Q+G+G DD P + I G+ V+QV+ G +H+V +
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISIPGQHQR---VVQVSCGWRHTVAV 334
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 167/384 (43%), Gaps = 55/384 (14%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKI 177
+K + +SAG SH+VALL V ++G D G +G + P + +++ I +
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGED--GQLGHGDAEDRHLPRIIGALNDCEISLV 62
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR----NARRGMSFLEPGEVPLKRK 233
A GADH ++ LT G GR+ ++S + + + LE ++
Sbjct: 63 ACGADHTTAYSA--TRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDS 120
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
H +++ G + ++G N QLG D++ PH + +
Sbjct: 121 HC---------LAVTADGEVYSWGRNQNGQLGLGDTDDS-------LVPHKLLAFEGVSV 164
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
MLA+G H+ A+ GK+Y +G YG LGL + + + P +P++ D+ + +ACG
Sbjct: 165 KMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGW 223
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNS 387
+ A+ G LY +G QLG+G D L
Sbjct: 224 RHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE 283
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
GK+Y +G + +G++G +V + + + IP Q + + ++CG + A+ + +Y
Sbjct: 284 AGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG-QHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 447 WGMGNGYQLGNGKEDDILEPMKIE 470
WG G QLG+G D P I+
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPKGIQ 366
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++K ++++G H++AL S + +FGR + G+LG + +E P I +L D I+ +
Sbjct: 4 ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD-AEDRHLPRIIGALNDCEISLV 62
Query: 350 ACGNCVSFAIDSEGV-LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
ACG + A + + +Y WG G D+GRLG N S
Sbjct: 63 ACGADHTTAYSATRLTIYSWGWG--------------------------DFGRLGHGNSS 96
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P PI +LQ I IACG+ A+ ++G +Y WG QLG G DD L P K
Sbjct: 97 DLFV-PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHK 155
Query: 469 IEGKQLNNYTVLQVASGGQHSVIL 492
+ +V +A+G +H+ +
Sbjct: 156 L--LAFEGVSVKMLAAGAEHTAAV 177
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 184/427 (43%), Gaps = 65/427 (15%)
Query: 90 VYTWGCNDEGALGREAE----------GDSEFIPQTVNLPKK-AVQISAGDSHSVALLED 138
V +GCND+G LG A+ S F Q NLP + V +S G H++AL
Sbjct: 8 VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67
Query: 139 GTVYAWGSFRDSHGSMGLKGEG---IQKTPLKL----ESVSGIVKIASGADHFVMLTSRG 191
G VY+WG GSMG G G I P K+ + + I+ G H +T G
Sbjct: 68 GAVYSWG-----WGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDG 122
Query: 192 NLLTAGCPEQGQLGRITQRSASRNA---RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
L G GQLG + A+ + + M E GE +K G + ++
Sbjct: 123 TLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVS-----CGGTHTAALT 177
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFF---TPHLIKSLSDKKFTMLASGQHHSLA 305
S G + +G + QLG ++ N PHL+K+ + +K +A G HS A
Sbjct: 178 SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAA 237
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ +G +Y +G+ DYG LG+ S+ P + D + ++CG
Sbjct: 238 VTEQGHVYVWGKEDYGMLGVGQSSDQQI-PKRLEYFDDIPVLRVSCG------------- 283
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
GW ++ G YAFGR +YGRLGL + ++ T P + +L+ KT+
Sbjct: 284 -GW------------HTVVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALKGKTV 329
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
ACG + + S+G Y G + +LG + P +++ L V Q ++G
Sbjct: 330 IQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLD---LGPIPVRQFSAG 386
Query: 486 GQHSVIL 492
G HSV L
Sbjct: 387 GAHSVAL 393
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 184/430 (42%), Gaps = 100/430 (23%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDL--------------DNVVEVVVGGMHTVC 83
VV G D GQLG G +R+ ++D+ +++V V G HT+
Sbjct: 7 VVTAFGCNDDGQLGTG---AKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMA 63
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPKKAV----QISAGDSHSVALLE 137
LT G VY+WG G++G+ GD + I PQ + ++ IS G HS A+ +
Sbjct: 64 LTSSGAVYSWGW---GSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTK 120
Query: 138 DGTVYAWGSFRDSH-GSMGLKGE---GIQKTPLKL-----ESVSGIVKIASGADHFVMLT 188
DGT+Y WG +SH G +GL E + P+K E+ IVK++ G H LT
Sbjct: 121 DGTLYVWG---ESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT 177
Query: 189 SRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG----- 241
S G + G + GQL G + + + G S R H+ F G
Sbjct: 178 SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGAS----------RPHLLKAFNGEKVVQ 227
Query: 242 -----VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
++ ++ +G + +G +Y LG S Q+ P ++ D +
Sbjct: 228 VACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQ-------IPKRLEYFDDIPVLRV 280
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
+ G H++ + G YAFGR +YGRLGL + ++ T P + +L+ KT+ ACG
Sbjct: 281 SCGGWHTVVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALKGKTVIQAACG---- 335
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT- 415
G + S+G Y GR D+GRLGL ++ + + PT
Sbjct: 336 ----------------------GSHTLFVTSDGTAYVAGRPDHGRLGLADM-KALGVPTR 372
Query: 416 ----PIPSLQ 421
PIP Q
Sbjct: 373 LDLGPIPVRQ 382
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 47/355 (13%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVE 73
P + + S T G V + G G GQLG G + E + A E V+
Sbjct: 47 PDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVD 106
Query: 74 VV-VGGMHTVCLTEDGKVYTWGCNDEGALG--REAEGDSEFIPQTVNLPK-----KAVQI 125
+ GG H+ +T+DG +Y WG + G LG +E E E +P +P+ V++
Sbjct: 107 YISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKV 166
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ----------KTPLKLESVSG-- 173
S G +H+ AL G VY WG R G +G+ ++ P L++ +G
Sbjct: 167 SCGGTHTAALTSFGRVYVWG--RGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEK 224
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+V++A GA H +T +G++ G + G LG + Q S + +R + + + ++P+ R
Sbjct: 225 VVQVACGAFHSAAVTEQGHVYVWGKEDYGMLG-VGQSSDQQIPKR-LEYFD--DIPVLR- 279
Query: 234 HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
V G ++T + +K G AFG Y +LG D++ + PHL+K+L K
Sbjct: 280 ----VSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTR-------PHLVKALKGKT 328
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT-----PIPSLQ 342
A G H+L + S+G Y GR D+GRLGL ++ + + PT PIP Q
Sbjct: 329 VIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADM-KALGVPTRLDLGPIPVRQ 382
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 53/295 (17%)
Query: 248 SSKGSILAFGLNNYSQLGEADSE-----VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+S+ + AFG N+ QLG + + F P I +L D+ ++ G H
Sbjct: 3 NSECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNF--PQQIGNLPDEDIVAVSCGSRH 60
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT--ITSIACGNCVSFAID 360
++AL S G +Y++G G+LG ++ + + EP I + + + I+CG C S A+
Sbjct: 61 TMALTSSGAVYSWGWGSMGQLGHGDL-KIINEPQKIAFFEQERLEVDYISCGGCHSAAVT 119
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDI--------------------------------LNSE 388
+G LY WG + QLG KE + L S
Sbjct: 120 KDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF 179
Query: 389 GKIYAFGRHDYGRLGLKNV--SEPVTE-------PTPIPSLQDKTITSIACGNCVSFAID 439
G++Y +GR D G+LG+ +V +P E P + + + + +ACG S A+
Sbjct: 180 GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVT 239
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G +Y WG + LG G+ D P ++E ++ VL+V+ GG H+V++AK
Sbjct: 240 EQGHVYVWGKEDYGMLGVGQSSDQQIPKRLE--YFDDIPVLRVSCGGWHTVVVAK 292
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 27 VPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVV 75
+P L+ GG G G+G+ G+LGLG D R LV+ L V++
Sbjct: 275 IPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLG-DTKSRTRPHLVKALKGKTVIQAA 333
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVA 134
GG HT+ +T DG Y G D G LG A+ + +P ++L P Q SAG +HSVA
Sbjct: 334 CGGSHTLFVTSDGTAYVAGRPDHGRLGL-ADMKALGVPTRLDLGPIPVRQFSAGGAHSVA 392
Query: 135 LLE 137
L+
Sbjct: 393 LMH 395
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 32/369 (8%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-----VVEVVVGGMHTVCLTEDGKVYTW 93
VL G GQLGLG +E +T L ++ + VV + G HT+ + +DG+V +
Sbjct: 11 VLCWGSLTHGQLGLGG--LEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSC 68
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G ND G LG E + ++ + +Q S+G HS L + G V+ WGS D+
Sbjct: 69 GNNDYGQLGHEKPCKRPALIDSLG-ERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLG 127
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
G P + ++ +V++A G+ H V LT+ G + T G GQLG +
Sbjct: 128 RGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANK-- 185
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSE 270
+N + +S + +P+ R V G +N ++ G++ A+G N++ QLG D +
Sbjct: 186 TPQNEPQWVSCI--SGLPIVR-----VAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQ 238
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + P L+K+L ++ LA G HSLAL +G ++ FG YG+LG N S
Sbjct: 239 DRGA-------PTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG-HNTSN 290
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILNS-- 387
P + L ++T IACG S A + S G +Y +G+G QLG G + ++
Sbjct: 291 NELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAM 350
Query: 388 -EGKIYAFG 395
+G AFG
Sbjct: 351 VKGPFVAFG 359
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 148/297 (49%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+CG D GQLG K AL++ L NV++ G H+ LT+ G+V+TWG
Sbjct: 63 GRVLSCGNNDYGQLGHEKPC---KRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWG 119
Query: 95 CNDEGALGR-EAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
N++ LGR + + S IP+ V K VQ++ G +H+V L G +Y WGS ++H
Sbjct: 120 SNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGS--NNH 177
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL + Q P + +SG IV++A+GADH ++LT G L GC GQLG
Sbjct: 178 GQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG---- 233
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ RG L L+ + I + G ++ ++ G + FG Y QLG
Sbjct: 234 --VGDDQDRGAPTLVKT---LRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT 288
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA-LNSEGKIYAFGRHDYGRLG 324
S + P + L T +A G+ HS+A + S G++Y FG G+LG
Sbjct: 289 SNNE-------LLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLG 338
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 52/364 (14%)
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
+V WGS +HG +GL G E P ++ S + V IA G H + + G +L+
Sbjct: 10 SVLCWGSL--THGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSIL 254
G + GQLG + +R GE +++ +G ++T ++ G +
Sbjct: 68 CGNNDYGQLGH------EKPCKRPALIDSLGE-----RNVLQASSGTKHSTVLTDAGQVF 116
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G N +QLG + + P +++ L+D K +A G H++ L + G+IY
Sbjct: 117 TWGSNEDNQLGRGQVDSASTS-----IPRMVRGLADHKVVQVACGSAHTVGLTATGQIYT 171
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G +++G+LGL N P EP + + I +A G + + G L+ WG +
Sbjct: 172 WGSNNHGQLGLAN-KTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFG 230
Query: 375 QLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVS 408
QLG G + D L +G ++ FG YG+LG N S
Sbjct: 231 QLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG-HNTS 289
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
P + L ++T IACG S A + S G +Y +G+G QLG G + + P
Sbjct: 290 NNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPA 349
Query: 468 KIEG 471
++G
Sbjct: 350 MVKG 353
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 23/242 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKV 90
T G V T G + QLG G D +V L + VV+V G HTV LT G++
Sbjct: 110 TDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQI 169
Query: 91 YTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
YTWG N+ G LG + + + +++ LP V+++AG H++ L G ++AWG
Sbjct: 170 YTWGSNNHGQLGLANKTPQNEPQWVSCISGLP--IVRVAAGADHNLVLTISGALFAWGC- 226
Query: 148 RDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+S G +G+ + + P ++++ GI +A G DH + LT G + T G GQLG
Sbjct: 227 -NSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG 285
Query: 206 RITQRSASRNARRGMSFL--EPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
T + R+ + ++ RKH ++ S G + FGL Q
Sbjct: 286 HNTSNNELL-PRKVFELMGSSVTQIACGRKH--------SIAYVPSSGRVYVFGLGGNGQ 336
Query: 264 LG 265
LG
Sbjct: 337 LG 338
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 309 EGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+ + +G +G+LGL + E VT P I S + + IACG + L+
Sbjct: 8 KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACG--------LQHTLF- 58
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+ +G++ + G +DYG+LG + +P P I SL ++ +
Sbjct: 59 -----------------VKKDGRVLSCGNNDYGQLGHE---KPCKRPALIDSLGERNVLQ 98
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+ G S + G ++ WG QLG G+ D + + L ++ V+QVA G
Sbjct: 99 ASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSA 158
Query: 488 HSV 490
H+V
Sbjct: 159 HTV 161
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 388 EGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+ + +G +G+LGL + E VT P I S + + IACG + + +G +
Sbjct: 8 KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G + QLG+ E P I+ L VLQ +SG +HS +L
Sbjct: 68 CGNNDYGQLGH--EKPCKRPALIDS--LGERNVLQASSGTKHSTVL 109
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + + V +V G HTV + +DG VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVN-KKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CND G LG E S P+ V + V +S G++H++AL + G VYAWG D G
Sbjct: 60 CNDLGQLGHEK---SRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVD--G 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + + G + GQLG +
Sbjct: 115 QLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G++ +G N + QLG D
Sbjct: 175 YKKQASPQIIKSLL---GIPFAQIAAG----GAHSFVLTLSGAVFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K ++ G+ H+ AL EG ++ FG YG+LG + +
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 164/391 (41%), Gaps = 65/391 (16%)
Query: 144 WGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCP 199
WG+ S G +GL G E I P + + + G H V + G + T GC
Sbjct: 4 WGN--ASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
+ GQLG ++S R + G L ++I V G +T ++ KG + A+G
Sbjct: 62 DLGQLGH--EKSRKRPEQVG---------ALDAQNIVTVSCGEAHTLALNDKGQVYAWGF 110
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
QLG + +E P IKSLSD + +A G HSLAL+ +++++G++
Sbjct: 111 AVDGQLGLSGTEEYTR------VPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQN 164
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 165 KYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGL 224
Query: 379 GKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
E+D L EG ++ FG YG+LG + + +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEIN 284
Query: 413 EPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P + L +T IACG S + S G +Y +G+G QLG G + P ++G
Sbjct: 285 -PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKG 343
Query: 472 KQL-------------NNYTVLQVASGGQHS 489
L + Y V ++ SGG S
Sbjct: 344 NWLPYNGQIPLNSDGEDYYCVKRIFSGGDQS 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 145/312 (46%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ +G
Sbjct: 110 FAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWG--QNKYG 167
Query: 153 SMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E Q +P ++S+ GI +IA+G H +LT G + G + GQLG
Sbjct: 168 QLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 --NDENDRYVPNLLK----SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
+ + P + L T +A G+ H+ A S G+IY+FG G+LG+
Sbjct: 279 TAHE-------INPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGT 331
Query: 328 VSEPVTEPTPIP 339
S +P P
Sbjct: 332 TS---NRKSPFP 340
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG + ++ + +++ L + ++ GG H+ LT G V+ W
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D ++P + +K V IS G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLGR-I 207
G +G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGT 331
Query: 208 TQRSASRNARRGMSFLEPGEVPL 230
T S +G G++PL
Sbjct: 332 TSNRKSPFPVKGNWLPYNGQIPL 354
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ C F +KK + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRRCSF-------FVNKKVQDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---RPEQVGALDAQNIVTVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L Q+A+GG HS
Sbjct: 145 GYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQII--KSLLGIPFAQIAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDAQNIVTVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG QLG +G E+ P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNI--KSLSDIQIVQVACGYFH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|336373725|gb|EGO02063.1| hypothetical protein SERLA73DRAFT_166564 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386539|gb|EGO27685.1| hypothetical protein SERLADRAFT_354897 [Serpula lacrymans var.
lacrymans S7.9]
Length = 555
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 192/420 (45%), Gaps = 76/420 (18%)
Query: 27 VPTLKCKTGGGVVL-TCGQGDTGQLGLGPDVM----ERKTFALVE----------DLDNV 71
+PT K+ G L G G+ GQ G+G D++ + K A +E D +
Sbjct: 113 LPTPPEKSHPGCQLFVWGAGNFGQFGMGADLLGEFAKPKKSAWIETKMQEGAFGGDGAGL 172
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE--------GDSEFIPQTVNLPK--- 120
V GG+HT+ + E+G +++ G ND+ ALGR + G I + +P
Sbjct: 173 EAVAAGGLHTLFIDENGTIWSCGVNDDAALGRVTKDVPDPNKPGSFLDIDELTAVPYPLQ 232
Query: 121 -------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-----------GIQ 162
+AV+I+AGDS S A+ +G + WGSFR G++G GE G
Sbjct: 233 SLVDEKFRAVRIAAGDSISAAISSEGELRVWGSFRAVEGALGFSGEEKHQFLPKPILGYG 292
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF 222
+ P ++VS +ASG +H V+LT+ GN+ G EQGQLGR RR +
Sbjct: 293 QKPNDEKAVS----VASGNNHLVVLTTHGNVYAWGAGEQGQLGRKILE------RRKIHG 342
Query: 223 LEPGEVPLKRKHIDDVFTGV--YNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
P ++ L + V G Y +F + +G++ +GLN Q G + S +
Sbjct: 343 TVPEKIILGNRSNKAVLVGAGNYCSFAVDEEGAVWGWGLNTMGQTGTGVFD-PPSASDEV 401
Query: 280 FTPHLIKSLSDKKF-----TMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--------- 325
+P I +LS + +A G+HH+L L + GK+YA GR D +LGL
Sbjct: 402 RSPKKIPALSKEALEGDTVVEIAGGEHHTLFLTAAGKVYACGRCDGNQLGLNKDDNAEFR 461
Query: 326 -KNVSEPVTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ + + EP I DK+ I I+ G + I G LY WG +LG G+++
Sbjct: 462 DRPHKDCIDEPMEI-DFPDKSDPIIHISVGTHNNMVITRGGALYAWGEETQGELGVGEKE 520
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 169/397 (42%), Gaps = 84/397 (21%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
+G+ +A+G H + + G + + G + LGR+T+ N + SFL+ E+
Sbjct: 170 AGLEAVAAGGLHTLFIDENGTIWSCGVNDDAALGRVTKDVPDPN--KPGSFLDIDELTAV 227
Query: 229 --PLKRKHIDDVFTGVY-------NTFISSKGSILAFGLNNYSQ--LGEADSEVQKSGNT 277
PL+ +D+ F V + ISS+G + +G + LG + E +
Sbjct: 228 PYPLQ-SLVDEKFRAVRIAAGDSISAAISSEGELRVWGSFRAVEGALGFSGEEKHQ---- 282
Query: 278 CFFTPHLI----KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NV 328
F P I + +D+K +ASG +H + L + G +YA+G + G+LG K +
Sbjct: 283 --FLPKPILGYGQKPNDEKAVSVASGNNHLVVLTTHGNVYAWGAGEQGQLGRKILERRKI 340
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----- 383
V E + + +K + + GN SFA+D EG ++GWG+ Q G G D
Sbjct: 341 HGTVPEKIILGNRSNKAVL-VGAGNYCSFAVDEEGAVWGWGLNTMGQTGTGVFDPPSASD 399
Query: 384 --------------------------------ILNSEGKIYAFGRHDYGRLGL------- 404
L + GK+YA GR D +LGL
Sbjct: 400 EVRSPKKIPALSKEALEGDTVVEIAGGEHHTLFLTAAGKVYACGRCDGNQLGLNKDDNAE 459
Query: 405 ---KNVSEPVTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
+ + + EP I DK+ I I+ G + I G LY WG +LG G
Sbjct: 460 FRDRPHKDCIDEPMEI-DFPDKSDPIIHISVGTHNNMVITRGGALYAWGEETQGELGVG- 517
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
E + P+++ K+ ++ + VA GGQH++ + + K
Sbjct: 518 EKEAETPIEVVRKEGGSWQAIAVACGGQHTLGMFRKK 554
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD-------------VMERKTFALVEDLDNVVEVVVGGMH 80
T G V CG+ D QLGL D + E + D ++ + VG +
Sbjct: 434 TAAGKVYACGRCDGNQLGLNKDDNAEFRDRPHKDCIDEPMEIDFPDKSDPIIHISVGTHN 493
Query: 81 TVCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
+ +T G +Y WG +G LG +EAE E + + +A+ ++ G H++ +
Sbjct: 494 NMVITRGGALYAWGEETQGELGVGEKEAETPIEVV-RKEGGSWQAIAVACGGQHTLGMF 551
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 181/408 (44%), Gaps = 76/408 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V+ G G+ GQLG+G + E++ +V+ L+ V VV G +++ + +DGK++TWG N
Sbjct: 7 VIAWGSGEDGQLGIGNN-EEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E IP V VQ + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLKGEGIQKT----------PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G + E T P + S + ++A+G H V+LT G++ + G P
Sbjct: 124 GEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPW--PP 181
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNN 260
G I Q S VP++ + ++ V +N + G++ A+G N
Sbjct: 182 GDIKQIS----------------VPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNE 225
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y QLG D++ + P ++ LS +A+G HS AL +G++Y +GR ++
Sbjct: 226 YGQLGTGDTQPRSQ-------PITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 278
Query: 321 GRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
GRLG N P + L + I ++CG S A+ +G
Sbjct: 279 GRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDG---------------- 322
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKT 424
++Y FGR D+GRLG +P+ P IP ++ T
Sbjct: 323 ----------RMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLT 360
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 187/437 (42%), Gaps = 78/437 (17%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVY 142
+ + V WG ++G LG + E++ L P K + AG +S+A+ +DG ++
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLF 60
Query: 143 AWGSFRDSHGSMG----LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
WG + G++G K E I L +V+ IV+ A G H + + +G G
Sbjct: 61 TWGW--NQRGTLGHPPETKTENIPSQVKALANVN-IVQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 199 PEQGQLGRITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
E GQ G +R R RR + + L + + G ++ ++ +G + ++
Sbjct: 118 NEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQV--AAGGTHSVVLTREGHVWSW 175
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD-------KKFTMLASGQHHSLALNSE 309
G + P IK +S ++ ++A G H+LAL +
Sbjct: 176 GQP--------------------WPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQED 215
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++A+G ++YG+LG + ++P ++P + L T+ IA G S A+ +G +YGW
Sbjct: 216 GTLWAWGNNEYGQLGTGD-TQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGW- 273
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSI 428
GR ++GRLG N P + L + I +
Sbjct: 274 -------------------------GRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQV 308
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI-----------EGKQLNNY 477
+CG S A+ +G +Y +G G+ +LG G++ +PM++ + +
Sbjct: 309 SCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRW 368
Query: 478 TVLQVASGGQHSVILAK 494
VASGG+H++ + +
Sbjct: 369 IAKLVASGGRHTLAIVE 385
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V G+G+ G+LG G + K +L +++V+V GG H+V LT DG++
Sbjct: 265 TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRM 324
Query: 91 YTWGCNDEGALG---REAEGDSEFIPQTVNLPKK-----------AVQISAGDSHSVALL 136
YT+G D G LG + G +P + PK A +++G H++A++
Sbjct: 325 YTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIV 384
Query: 137 E 137
E
Sbjct: 385 E 385
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 169/363 (46%), Gaps = 49/363 (13%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WG+ +HG +GL G E P K++ +V++ G H + LT G +
Sbjct: 3 IYCWGN--TAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYAC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG ++ +R S L+ I + G ++ +++ G + +
Sbjct: 61 GNNDHGQLGHDLDTLPNKRPQRLTS--------LENYIITCISCGTAHSLALTNWGQVFS 112
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG D+E + TP +IK++ K +ASGQ+H LAL + G++YA+
Sbjct: 113 WGSNAVGQLGH-DAENGRQP-----TPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAW 166
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G + YG+LG+ SE V PT I SL I IACG SFA+ G ++GWG Q
Sbjct: 167 GSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQ 226
Query: 376 LG----NGK-------------------EDD---ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG N + DD L +EG ++ G +G+LG + S
Sbjct: 227 LGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSN 286
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L IT IACG + A + S G +YG+G+G QLG G + P
Sbjct: 287 EIV-PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQI 345
Query: 469 IEG 471
+ G
Sbjct: 346 VRG 348
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 46/337 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFA 63
+Q P + + ++ V ++C T + LT CG D GQLG D + K
Sbjct: 22 EQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQ 81
Query: 64 LVEDLDNVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--P 119
+ L+N + + G H++ LT G+V++WG N G LG +AE + P+ +
Sbjct: 82 RLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGA 141
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK--LESVSG--IV 175
K VQI++G H +AL +G +YAWGS +S+G +G+ G +K P+ ++S++G I
Sbjct: 142 KHVVQIASGQYHCLALTNNGELYAWGS--NSYGQLGI-GTTSEKVPMPTLIQSLAGVPIA 198
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H ++ G + G GQLG + R R G+ ++ G
Sbjct: 199 FIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCG--- 255
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
DD ++ F++++G + G + QLG + P + L
Sbjct: 256 ------DD-----FSVFLTNEGGVFTCGAGTFGQLGHGSCSNE-------IVPRKVFELM 297
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGL 325
K T +A G+ H+LA S GKIY FG G+LG+
Sbjct: 298 GSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGI 334
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 165/351 (47%), Gaps = 28/351 (7%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
+ G G+LGLG E+ D D VV V G HT+ LT++GK+Y G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQ--ISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
ND G LG + + PQ + + + IS G +HS+AL G V++WGS ++ G
Sbjct: 63 NDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS--NAVGQ 120
Query: 154 MGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G E G Q TP ++++ +V+IASG H + LT+ G L G GQLG T
Sbjct: 121 LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGT-- 178
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
S VP I + G ++F +S G+I +G N + QLG D
Sbjct: 179 -TSEKVPMPTLIQSLAGVP-----IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND- 231
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ C+ P +++L ++ G S+ L +EG ++ G +G+LG + S
Sbjct: 232 ----LNSRCY--PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCS 285
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
+ P + L IT IACG + A + S G +YG+G+G QLG G
Sbjct: 286 NEIV-PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
>gi|426192396|gb|EKV42332.1| hypothetical protein AGABI2DRAFT_188512 [Agaricus bisporus var.
bisporus H97]
Length = 586
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 189/417 (45%), Gaps = 81/417 (19%)
Query: 38 VVLTCGQGDTGQLGLGPDVMER----KTFALVEDLDN----------VVEVVVGGMHTVC 83
++ G G+ GQ G+GPDV++ K VE+ + + V GG+HT+
Sbjct: 148 ILFVFGAGNFGQFGMGPDVLDSLTKPKRNQWVEEQISKGTFGEVGAGITAVAGGGLHTLF 207
Query: 84 LTEDGKVYTWGCNDEGALGR--------EAEGDSEFIPQTVNLPK----------KAVQI 125
E G V++ G ND ALGR + EG + + + P+ +AV +
Sbjct: 208 ADEKGTVWSCGANDNAALGRITTDVPDPDNEGSFLDVDELTSWPRPLQTLVDEHFRAVLV 267
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVS-------GIVKI 177
+AGDS + + G + WG+FR G++G G+ Q P + ++S + +
Sbjct: 268 AAGDSIGAVVSDQGELRVWGTFRGMEGALGFSDGKDKQHLPTPILTLSHKPGDYEKVSSV 327
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL---KRKH 234
A+G +H V++T+ G+L T G EQGQLGR RR + P ++ L RK
Sbjct: 328 AAGNNHLVIVTTHGHLYTLGVGEQGQLGRKILE------RRKIHGTHPEKICLGTRSRKA 381
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ V G Y++F I + +GLN Q G S + C P ++SLS +
Sbjct: 382 VK-VAAGSYHSFAIDDNDDVWGWGLNTMGQTGTGWSS---RDDDCVHFPQKVESLSRESL 437
Query: 294 T-----MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-------------- 334
+ +A+G+HH++ L + GK+Y+ GR D +LGL++ + + E
Sbjct: 438 SGDTVVQIAAGEHHTIFLTAAGKVYSCGRMDGSQLGLEDDNPAIIEWKEKYAEMFDGAVP 497
Query: 335 ---PTP----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
PTP P D + I+ G + + G L WG G +LG G ++++
Sbjct: 498 QFLPTPTEVAFPDADD-AVVQISTGVHNNAVVTRGGALLTWGQGIQGELGCGDDEEV 553
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 162/404 (40%), Gaps = 89/404 (22%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
+GI +A G H + +G + + G + LGRIT + SFL+ E+
Sbjct: 193 AGITAVAGGGLHTLFADEKGTVWSCGANDNAALGRITTDVPDPDNE--GSFLDVDELTSW 250
Query: 229 --PLKRKHIDDVFTGVY-------NTFISSKGSILAFGLNNYSQ--LGEADSEVQKSGNT 277
PL+ +D+ F V +S +G + +G + LG +D G
Sbjct: 251 PRPLQ-TLVDEHFRAVLVAAGDSIGAVVSDQGELRVWGTFRGMEGALGFSD------GKD 303
Query: 278 CFFTPHLIKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P I +LS K K + +A+G +H + + + G +Y G + G+LG K +
Sbjct: 304 KQHLPTPILTLSHKPGDYEKVSSVAAGNNHLVIVTTHGHLYTLGVGEQGQLGRKILERRK 363
Query: 333 ---TEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---KEDD-- 383
T P I + + +A G+ SFAID ++GWG+ Q G G ++DD
Sbjct: 364 IHGTHPEKICLGTRSRKAVKVAAGSYHSFAIDDNDDVWGWGLNTMGQTGTGWSSRDDDCV 423
Query: 384 ------------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
L + GK+Y+ GR D +LGL++ + + E
Sbjct: 424 HFPQKVESLSRESLSGDTVVQIAAGEHHTIFLTAAGKVYSCGRMDGSQLGLEDDNPAIIE 483
Query: 414 -----------------PTP----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
PTP P D + I+ G + + G L WG G
Sbjct: 484 WKEKYAEMFDGAVPQFLPTPTEVAFPDADD-AVVQISTGVHNNAVVTRGGALLTWGQGIQ 542
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+LG G ++++ P + K ++ + V+ GGQH++ L K K
Sbjct: 543 GELGCGDDEEVETPKVVVRKDGGSWFAVAVSCGGQHTLGLLKKK 586
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 34 TGGGVVLTCGQGDTGQLGL---GPDVMERK-------------------TFALVEDLDNV 71
T G V +CG+ D QLGL P ++E K A + D V
Sbjct: 456 TAAGKVYSCGRMDGSQLGLEDDNPAIIEWKEKYAEMFDGAVPQFLPTPTEVAFPDADDAV 515
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK------AVQI 125
V++ G + +T G + TWG +G LG GD E + + +K AV +
Sbjct: 516 VQISTGVHNNAVVTRGGALLTWGQGIQGELGC---GDDEEVETPKVVVRKDGGSWFAVAV 572
Query: 126 SAGDSHSVALLE 137
S G H++ LL+
Sbjct: 573 SCGGQHTLGLLK 584
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 200/466 (42%), Gaps = 59/466 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G +GQLG G +R T V L V + GG HT T G V WG
Sbjct: 239 GGVWCWGDNWSGQLGDGT-TTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGA 297
Query: 96 NDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG + + P V+ L I+AGDSH+ AL G V+ WG +
Sbjct: 298 NWSGQLG-DGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWG-----YNFF 351
Query: 155 GLKGEGI---QKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G G+G + TP+ + + SG+ IA+G H L S G + G + GQLG T
Sbjct: 352 GQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGT-- 409
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ +R+ +S L G + DD + +S G ++ +G N QLG+ +
Sbjct: 410 TTTRSTPVAVSGLVSGVTAIAAG--DD-----HTCARTSSGGVMCWGDNWSGQLGDGTTT 462
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ TP + L T +A+G H+ AL S G ++ +GR+ G+LG ++
Sbjct: 463 DRS-------TPVAVSGL-GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
T P + L + +T+IA G + A+ S G + WG QLG+G
Sbjct: 515 RGT-PVAVSGLPSE-VTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAV 572
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
L S G ++ +G + G+LG + + P + L +
Sbjct: 573 SGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLG-DGTTTARSTPVAVSGLPSG-V 630
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
T+IA G+ + A+ S G ++ WG QLG+G D P+ + G
Sbjct: 631 TAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSG 676
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 192/465 (41%), Gaps = 49/465 (10%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+T G V+ G +GQLG G A+ V + G HT LT G V+
Sbjct: 286 RTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWC 345
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N G LG D L I+AGD H+ AL+ G V WG R+ G
Sbjct: 346 WGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWG--RNKDG 403
Query: 153 SMGLKGEGIQKTPLKLES-VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + TP+ + VSG+ IA+G DH TS G ++ G GQLG T +
Sbjct: 404 QLGDGTTTTRSTPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT--T 461
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
R+ +S L G + G + + S G + +G N+ QLG+ +
Sbjct: 462 TDRSTPVAVSGLGSGVTAIAAG-------GSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+ TP + L + T +ASG H+ AL S G + +G + G+LG +
Sbjct: 515 RG-------TPVAVSGL-PSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLG-DGTTTA 565
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------- 383
+ P + L + +IA G+ + A+ S G ++ WG + QLG+G
Sbjct: 566 RSTPVAVSGLPSG-VMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVS 624
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
L S G ++ +G + G+LG + ++ T P + L +T
Sbjct: 625 GLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSST-PVAVSGLPSG-VT 682
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+IA G + A G ++ W QLG+G D P+ + G
Sbjct: 683 AIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSG 727
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 201/483 (41%), Gaps = 54/483 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V+ G +GQLG G +R T V L V + G HT T G V WG
Sbjct: 137 GGVMCWGDNWSGQLGDGT-TTDRSTPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGD 195
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG D L I+AG SH+ AL+ G V+ WG + G +G
Sbjct: 196 NWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWG--DNWSGQLG 253
Query: 156 LKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
+ TP+ + + SG+ IA+G H TS G ++ G GQLG T + +R
Sbjct: 254 DGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGT--TTAR 311
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
+ +S L G + + ++S G + +G N + QLG+ + +
Sbjct: 312 STPVAVSGLASGVTAIAAGD-------SHTCALTSSGGVWCWGYNFFGQLGDGTTTDRS- 363
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + L T +A+G H+ AL S G + +GR+ G+LG + +
Sbjct: 364 ------TPVAVSGL-GSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLG-DGTTTTRST 415
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
P + L +T+IA G+ + A S G + WG QLG+G D
Sbjct: 416 PVAVSGLVSG-VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLG 474
Query: 384 --------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
L S G ++ +GR+ G+LG ++ T P + L + +T+IA
Sbjct: 475 SGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT-PVAVSGLPSE-VTAIA 532
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A+ S G + WG QLG+G P+ + G V+ +A+G H+
Sbjct: 533 SGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSG---VMAIAAGDLHT 589
Query: 490 VIL 492
L
Sbjct: 590 CAL 592
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 186/451 (41%), Gaps = 52/451 (11%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L V + GG HT LT G V WG N G LG D L I+A
Sbjct: 66 LQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVTAIAA 125
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVM 186
G +H+ AL+ G V WG + G +G + TP+ + + SG+ IA+G DH
Sbjct: 126 GYAHTCALMSSGGVMCWG--DNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGDDHTCA 183
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
TS G ++ G GQLG T + R+ +S L G + G +
Sbjct: 184 RTSSGGVMCWGDNWSGQLGDGT--TTDRSTPVAVSGLGSGVTAIAAG-------GSHTCA 234
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ S G + +G N QLG+ + + TP + L+ T +A+G H+ A
Sbjct: 235 LMSSGGVWCWGDNWSGQLGDGTTTDRS-------TPVAVSGLA-SGVTAIAAGGFHTCAR 286
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
S G + +G + G+LG + + P + L +T+IA G+ + A+ S G ++
Sbjct: 287 TSSGGVMCWGANWSGQLG-DGTTTARSTPVAVSGLASG-VTAIAAGDSHTCALTSSGGVW 344
Query: 367 GWGMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGR 401
WG QLG+G D L S G + +GR+ G+
Sbjct: 345 CWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQ 404
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LG + + P + L +T+IA G+ + A S G + WG QLG+G
Sbjct: 405 LG-DGTTTTRSTPVAVSGLVSG-VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTT 462
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
D P+ + G V +A+GG H+ L
Sbjct: 463 DRSTPVAVSGLGSG---VTAIAAGGSHTCAL 490
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 197/487 (40%), Gaps = 54/487 (11%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVY 91
+T G V+ G +GQLG G +R T V L V + GG HT L G V+
Sbjct: 184 RTSSGGVMCWGDNWSGQLGDGT-TTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVW 242
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG N G LG D L I+AG H+ A G V WG+ +
Sbjct: 243 CWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGA--NWS 300
Query: 152 GSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G + TP+ + + SG+ IA+G H LTS G + G GQLG T
Sbjct: 301 GQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGT-- 358
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ R+ +S L G + + + S G + +G N QLG+ +
Sbjct: 359 TTDRSTPVAVSGLGSGVTAIAAGDF-------HTCALMSSGGVRCWGRNKDGQLGDGTTT 411
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ TP + L T +A+G H+ A S G + +G + G+LG ++
Sbjct: 412 TRS-------TPVAVSGLV-SGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 463
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
T P + L +T+IA G + A+ S G ++ WG + QLG+G D
Sbjct: 464 RST-PVAVSGLGSG-VTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAV 521
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
L S G + +G + G+LG + + P + L +
Sbjct: 522 SGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLG-DGTTTARSTPVAVSGLPSG-V 579
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+IA G+ + A+ S G ++ WG + QLG+G P+ + G V +A+G
Sbjct: 580 MAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSG---VTAIAAG 636
Query: 486 GQHSVIL 492
H+ L
Sbjct: 637 SFHTCAL 643
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 158/351 (45%), Gaps = 26/351 (7%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVY 91
+T G V+ G +GQLG G +R T V L V + GG HT L G V+
Sbjct: 439 RTSSGGVMCWGDNWSGQLGDGT-TTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVW 497
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG N G LG D LP + I++G H+ AL G V WG+ +
Sbjct: 498 CWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGA--NWS 555
Query: 152 GSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G + TP+ + + SG++ IA+G H LTS G + G GQLG T
Sbjct: 556 GQLGDGTTTARSTPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGT-- 613
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
+ +R+ +S L G + + G ++T ++S G + +G N QLG+ S
Sbjct: 614 TTARSTPVAVSGLPSG--------VTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDG-S 664
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
S TP + L T +A+G+ H+ A G ++ + + YG+LG + +
Sbjct: 665 YTDSS------TPVAVSGL-PSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYT 717
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+ T P + L +T+IA G + A S G + WG + QLG+G+
Sbjct: 718 DSST-PVAVSGLVSG-VTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGR 766
>gi|406699214|gb|EKD02424.1| poly(a)+ RNA transport protein [Trichosporon asahii var. asahii CBS
8904]
Length = 651
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 153/334 (45%), Gaps = 58/334 (17%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALV--------EDLD------NVVEVVVGGMHT 81
G + G GD GQ G GPD ++ K + ED + + + GGMHT
Sbjct: 152 GLALFVWGTGDMGQFGTGPDDLDEKPRPQIHKWIEEHREDGELGAGTGGIESIAAGGMHT 211
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEG--------------DSEFIPQTVNLPK----KAV 123
+ + E G +WG ND ALGR D E P V + +AV
Sbjct: 212 LAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVVKALEDEGFRAV 271
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSG--IVKI 177
+++AGDS SVAL +G + AWGSFR + G +G G Q TP++L +++ IV +
Sbjct: 272 KVAAGDSVSVALSAEGGLRAWGSFRSNEGILGFDGVPGHPKFQFTPMELPALARVEIVDV 331
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
A GADH + LTS G + G +Q QLGR + LEP + L +++
Sbjct: 332 ACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAG------LEPERLGL--RNVVH 383
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK----- 291
V G++++F + G + A+GLN Y Q G SE P + +LS K
Sbjct: 384 VAAGMFHSFAVDKNGDVWAWGLNTYGQTGLDSSE------EMIIRPQKVTALSPKEHGGA 437
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ + G HSL L G+++ GR D LGL
Sbjct: 438 RVVQIEGGDAHSLFLFDNGEVWGVGRQDGNELGL 471
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 43/336 (12%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE---FIP 113
ME A VE +V+V G H + LT DG VY WG + LGR P
Sbjct: 318 MELPALARVE----IVDVACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAGLEP 373
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVS 172
+ + L + V ++AG HS A+ ++G V+AWG +++G GL E + P K+ ++S
Sbjct: 374 ERLGL-RNVVHVAAGMFHSFAVDKNGDVWAWG--LNTYGQTGLDSSEEMIIRPQKVTALS 430
Query: 173 G-------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
+V+I G H + L G + G + +LG A + ++
Sbjct: 431 PKEHGGARVVQIEGGDAHSLFLFDNGEVWGVGRQDGNELGLAQDHPAQEGLKERRKEIQ- 489
Query: 226 GEVPLKRKHIDDVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEV-------QKSGNT 277
E K K ++ K +L +GE E ++
Sbjct: 490 EEREAKVKEAEEALEKASEDDKEDKQMKLLEAQAALRVPMGEYVPEPVRLSFTSDRADRQ 549
Query: 278 CFFTP-----HLIKSL------SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
F P ++ + + +++G H+LA++ G +YA+G + G+LGL
Sbjct: 550 IAFPPIPEAYEIVPDMPPWSEPATNPIARISAGTRHNLAVSKSGHVYAWGLGNQGQLGLG 609
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACG----NCVSFA 358
+V E + PT + S Q + ++ C +CV A
Sbjct: 610 SVEE-ASVPTLVRSKQLRPYDAVDCSAGGQHCVLIA 644
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------------PTPIPSL 341
+A+G H+LA++ G ++G +D LG ++P E P + +L
Sbjct: 204 IAAGGMHTLAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVVKAL 263
Query: 342 QDKTITS--IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+D+ + +A G+ VS A+ +EG L WG +F R +
Sbjct: 264 EDEGFRAVKVAAGDSVSVALSAEGGLRAWG-----------------------SF-RSNE 299
Query: 400 GRLGLKNVS-EPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G LG V P + TP +P+L I +ACG A+ S+G +Y WG G QLG
Sbjct: 300 GILGFDGVPGHPKFQFTPMELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQLG 359
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+E ++L V+ VA+G HS + K
Sbjct: 360 RRILARRAA-AGLEPERLGLRNVVHVAAGMFHSFAVDK 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
SEP T P I I+ G + A+ G +Y WG+GN QLG G ++ P
Sbjct: 569 SEPATNP----------IARISAGTRHNLAVSKSGHVYAWGLGNQGQLGLGSVEEASVPT 618
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
+ KQL Y + ++GGQH V++AK
Sbjct: 619 LVRSKQLRPYDAVDCSAGGQHCVLIAK 645
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 47/327 (14%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-QRSASRNARRGMSFLEPGEVPLK 231
GI IA+G H + + G+ + G + LGR T + N + + P
Sbjct: 200 GIESIAAGGMHTLAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFV 259
Query: 232 RKHIDDV-FTGV-------YNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCF-F 280
K ++D F V + +S++G + A+G +N LG G+ F F
Sbjct: 260 VKALEDEGFRAVKVAAGDSVSVALSAEGGLRAWGSFRSNEGILGFDGV----PGHPKFQF 315
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
TP + +L+ + +A G H LAL S+G +Y +G +LG + ++
Sbjct: 316 TPMELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAGLEPER 375
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
L + + +A G SFA+D G ++ WG+ YG
Sbjct: 376 LGLRNVVHVAAGMFHSFAVDKNGDVWAWGLNT--------------------------YG 409
Query: 401 RLGLKNVSEPVTEPTPIPSLQDK-----TITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ GL + E + P + +L K + I G+ S + G ++G G +G +L
Sbjct: 410 QTGLDSSEEMIIRPQKVTALSPKEHGGARVVQIEGGDAHSLFLFDNGEVWGVGRQDGNEL 469
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQV 482
G ++ E +K K++ +V
Sbjct: 470 GLAQDHPAQEGLKERRKEIQEEREAKV 496
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 50/364 (13%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGC 95
VL G G+ GQLG+G E+ V LD V VV G +++ + +DG+++TWG
Sbjct: 9 AVLAWGSGEDGQLGMG-GCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGW 67
Query: 96 NDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF------ 147
N G LG E +E P V K VQ + G H +A+ + G YAWG
Sbjct: 68 NQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 127
Query: 148 ----RDSHGSMGLKGE--GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
R G+ L+ + Q+ LKL+ + ++A+G H V+LT G++ T G P
Sbjct: 128 EEPERKEDGTRALRRDIPTPQRCALKLK----VQQVAAGGTHSVVLTQEGHVWTWGQPWP 183
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFG 257
G I Q S P++ + ++ V +N +S + A+G
Sbjct: 184 --PGDIKQIS----------------TPVRVQGLEKVMMIAVGAFHNLALSEDAVLWAWG 225
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N Y QLG D++ + P ++ LS +A+G HS AL +G++YA+GR
Sbjct: 226 NNEYGQLGIGDTQPRSQ-------PIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGR 278
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
++GRLG + P + L + I ++CG S A+ S+G ++ +G G+ +LG
Sbjct: 279 GEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLG 338
Query: 378 NGKE 381
G++
Sbjct: 339 YGRK 342
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 194/428 (45%), Gaps = 67/428 (15%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVY 142
L V WG ++G LG + ++ + L AV + AG +S+A+ +DG ++
Sbjct: 4 LPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLF 63
Query: 143 AWGSFRDSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCP 199
WG + G++G E + +P +E+++G IV+ A G H + + +G G
Sbjct: 64 TWG--WNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGN 121
Query: 200 EQGQLGRITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
E GQ G +R +R RR + P LK K G ++ ++ +G + +G
Sbjct: 122 EYGQCGEEPERKEDGTRALRRDIP--TPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWG 179
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
++++ TP ++ L +K M+A G H+LAL+ + ++A+G
Sbjct: 180 QP------WPPGDIKQ-----ISTPVRVQGL--EKVMMIAVGAFHNLALSEDAVLWAWGN 226
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
++YG+LG+ + ++P ++P + L ++ IA G S A
Sbjct: 227 NEYGQLGIGD-TQPRSQPIRVEGLSGLSLVDIAAGGWHSTA------------------- 266
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L +G++YA+GR ++GRLG + P + L + I ++CG S A
Sbjct: 267 -------LTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVA 319
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI-------------EGKQLNNYTVLQVAS 484
+ S+G ++ +G G+ +LG G++ PM++ +G N+ VA
Sbjct: 320 LTSDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANF----VAC 375
Query: 485 GGQHSVIL 492
GG+H++ +
Sbjct: 376 GGRHTLAI 383
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 52/278 (18%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++LA+G QLG + + H + +L + + +G +SLA+ +G+
Sbjct: 9 AVLAWGSGEDGQLGMGGCDEKDWA-------HRVAALDPYAVSAVVAGSRNSLAICDDGR 61
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + G LG ++ + P P+ +L I A G A+D +G Y WG G
Sbjct: 62 LFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWG-G 120
Query: 372 NGY-QLGN---GKEDD-------------------------------ILNSEGKIYAFGR 396
N Y Q G KED +L EG ++ +G+
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQ 180
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ +K +S PV + L+ + IA G + A+ + VL+ WG QLG
Sbjct: 181 -PWPPGDIKQISTPVR----VQGLE--KVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLG 233
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +P+++EG L+ +++ +A+GG HS L K
Sbjct: 234 IGDTQPRSQPIRVEG--LSGLSLVDIAAGGWHSTALTK 269
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D V+ LD ++V+V GG H+V LT DG+++++G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYG 330
Query: 95 CNDEGALG---REAEGDSEFIPQTVNLPK---------KAVQISAGDSHSVALL 136
D G LG + G +P + PK +A ++ G H++A++
Sbjct: 331 RGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAIV 384
>gi|367043236|ref|XP_003651998.1| hypothetical protein THITE_2112852 [Thielavia terrestris NRRL 8126]
gi|346999260|gb|AEO65662.1| hypothetical protein THITE_2112852 [Thielavia terrestris NRRL 8126]
Length = 510
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 178/399 (44%), Gaps = 65/399 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVM-----ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+ G G+LGLGP V + + VV+V +G MH V LT D ++ TW
Sbjct: 86 IYVMGANSGGELGLGPSVKSGNVGRPRLNPYLSGPAGVVQVSLGAMHGVALTLDNRILTW 145
Query: 94 GCNDEGALGREA------------EGDS---------EFIPQTVNL---PKKAV--QISA 127
G ND GALGR+ E DS E P V++ P V Q++A
Sbjct: 146 GVNDHGALGRDTAWEGNMVDADAEESDSDDEGELNPKESTPTPVDMGDVPPGTVFTQVAA 205
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSGIVKIASGADHFVM 186
D+ + L G VY WG+FR G + +Q+ P + V +VKI G++H +
Sbjct: 206 TDNATFVLTSTGRVYGWGTFRSEDGKLSFSPAVKVQRRPALILLVQDVVKICCGSNHVMA 265
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK---RKHIDDVFTGVY 243
LT+ G + T G GQLGR R + R + + + G +P K K+I ++ +G
Sbjct: 266 LTADGYVYTWGRGTDGQLGR-------RFSSRVVDWNKEGLIPRKVAGLKNIVEIGSGSN 318
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF----TPHLIKSLSD-KKFTMLA 297
++F + GS+ +G NN Q+G D + F P L+KSL + +
Sbjct: 319 HSFAVDRAGSVYGWGFNNAGQIGVVDDAGEYESAYDFALTVSVPSLVKSLEGLPRIIQIT 378
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIPSLQD 343
G HSLA+ ++G A+GR GLK P + PT +P L
Sbjct: 379 GGNFHSLAVTADGTCLAWGRLYSFATGLKIDDLPSQFVVRDSRGKPSFLRVPTAVPGL-- 436
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ +A + S A+ ++ +Y WG+ Q+G+ +E+
Sbjct: 437 -SPAFVAAASEHSLAVTTDEKVYTWGLNLTKQIGHKEEE 474
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 44 QGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
+ + G+L P V ++ AL+ + +VV++ G H + LT DG VYTWG +G LGR
Sbjct: 226 RSEDGKLSFSPAVKVQRRPALILLVQDVVKICCGSNHVMALTADGYVYTWGRGTDGQLGR 285
Query: 104 E-----AEGDSE-FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL- 156
+ + E IP+ V K V+I +G +HS A+ G+VY WG F ++ G +G+
Sbjct: 286 RFSSRVVDWNKEGLIPRKVAGLKNIVEIGSGSNHSFAVDRAGSVYGWG-FNNA-GQIGVV 343
Query: 157 --KGE-----------GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
GE + LE + I++I G H + +T+ G L G
Sbjct: 344 DDAGEYESAYDFALTVSVPSLVKSLEGLPRIIQITGGNFHSLAVTADGTCLAWGRLYSFA 403
Query: 204 LG----RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV---YNTFISSKGSILAF 256
G + + R++R SFL VP + F ++ +++ + +
Sbjct: 404 TGLKIDDLPSQFVVRDSRGKPSFL---RVPTAVPGLSPAFVAAASEHSLAVTTDEKVYTW 460
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHL-IKSLSDKKFTMLASGQHHSL 304
GLN Q+G + EV+ HL ++DK+F +G +S+
Sbjct: 461 GLNLTKQIGHKEEEVE-------LATHLNHPDIADKRFVWAGAGAQYSM 502
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 181/458 (39%), Gaps = 72/458 (15%)
Query: 85 TEDGKVYTWGCNDEGALGREAE------GDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
T+ +Y G N G LG G P ++ P VQ+S G H VAL D
Sbjct: 81 TQPLNIYVMGANSGGELGLGPSVKSGNVGRPRLNPY-LSGPAGVVQVSLGAMHGVALTLD 139
Query: 139 GTVYAWGSFRDSHGSMG------------------------LKGEGIQKTPLKLESV--- 171
+ WG + HG++G L + TP+ + V
Sbjct: 140 NRILTWGV--NDHGALGRDTAWEGNMVDADAEESDSDDEGELNPKESTPTPVDMGDVPPG 197
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+ ++A+ + +LTS G + G + + G+++ A + RR P + L
Sbjct: 198 TVFTQVAATDNATFVLTSTGRVYGWGT-FRSEDGKLSFSPAVKVQRR------PALILLV 250
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ + + +++ G + +G QLG S N P + L K
Sbjct: 251 QDVVKICCGSNHVMALTADGYVYTWGRGTDGQLGRRFSSRVVDWNKEGLIPRKVAGL--K 308
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTPIPSL 341
+ SG +HS A++ G +Y +G ++ G++G+ + + V+ P+ + SL
Sbjct: 309 NIVEIGSGSNHSFAVDRAGSVYGWGFNNAGQIGVVDDAGEYESAYDFALTVSVPSLVKSL 368
Query: 342 QD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
+ I I GN S A+ ++G WG Y G + D L S+ + R G
Sbjct: 369 EGLPRIIQITGGNFHSLAVTADGTCLAWG--RLYSFATGLKIDDLPSQFVV----RDSRG 422
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+ V PT +P L + +A + S A+ ++ +Y WG+ Q+G+ KE
Sbjct: 423 KPSFLRV------PTAVPGL---SPAFVAAASEHSLAVTTDEKVYTWGLNLTKQIGH-KE 472
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
+++ + + + + +G Q+S+I PN
Sbjct: 473 EEVELATHLNHPDIADKRFVWAGAGAQYSMIGEAAAPN 510
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 135/324 (41%), Gaps = 45/324 (13%)
Query: 55 DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC--NDEGALGREAEGDSEFI 112
DV F V DN T LT G+VY WG +++G L +
Sbjct: 193 DVPPGTVFTQVAATDNA---------TFVLTSTGRVYGWGTFRSEDGKLSFSPAVKVQRR 243
Query: 113 PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK---------GEGIQK 163
P + L + V+I G +H +AL DG VY WG R + G +G + EG+
Sbjct: 244 PALILLVQDVVKICCGSNHVMALTADGYVYTWG--RGTDGQLGRRFSSRVVDWNKEGL-- 299
Query: 164 TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
P K+ + IV+I SG++H + G++ G GQ+G + +A F
Sbjct: 300 IPRKVAGLKNIVEIGSGSNHSFAVDRAGSVYGWGFNNAGQIGVVDDAGEYESA---YDFA 356
Query: 224 EPGEVPLKRKHIDDV-----FTG--VYNTFISSKGSILAFG-LNNYS---QLGEADSEV- 271
VP K ++ + TG ++ +++ G+ LA+G L +++ ++ + S+
Sbjct: 357 LTVSVPSLVKSLEGLPRIIQITGGNFHSLAVTADGTCLAWGRLYSFATGLKIDDLPSQFV 416
Query: 272 --QKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
G F P + LS +A+ HSLA+ ++ K+Y +G + ++G K
Sbjct: 417 VRDSRGKPSFLRVPTAVPGLSP---AFVAAASEHSLAVTTDEKVYTWGLNLTKQIGHKEE 473
Query: 329 SEPVTEPTPIPSLQDKTITSIACG 352
+ P + DK G
Sbjct: 474 EVELATHLNHPDIADKRFVWAGAG 497
>gi|401888171|gb|EJT52136.1| poly(a)+ RNA transport protein [Trichosporon asahii var. asahii CBS
2479]
Length = 651
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 153/334 (45%), Gaps = 58/334 (17%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALV--------EDLD------NVVEVVVGGMHT 81
G + G GD GQ G GPD ++ K + ED + + + GGMHT
Sbjct: 152 GLALFVWGTGDMGQFGTGPDDLDEKPRPQIHKWIEEHREDGELGAGTGGIESIAAGGMHT 211
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEG--------------DSEFIPQTVNLPK----KAV 123
+ + E G +WG ND ALGR D E P V + +AV
Sbjct: 212 LAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVVKALEDEGFRAV 271
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSG--IVKI 177
+++AGDS SVAL +G + AWGSFR + G +G G Q TP++L +++ IV +
Sbjct: 272 KVAAGDSVSVALSAEGGLRAWGSFRSNEGILGFDGVPGHPKFQFTPMELPALARVEIVDV 331
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
A GADH + LTS G + G +Q QLGR + LEP + L +++
Sbjct: 332 ACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAG------LEPERLGL--RNVVH 383
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK----- 291
V G++++F + G + A+GLN Y Q G SE P + +LS K
Sbjct: 384 VAAGMFHSFAVDKNGDVWAWGLNTYGQTGLDSSE------EMIIRPQKVTALSPKEHGGA 437
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ + G HSL L G+++ GR D LGL
Sbjct: 438 RVVQIEGGDAHSLFLFDNGEVWGVGRQDGNELGL 471
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 43/336 (12%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE---FIP 113
ME A VE +V+V G H + LT DG VY WG + LGR P
Sbjct: 318 MELPALARVE----IVDVACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAGLEP 373
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVS 172
+ + L + V ++AG HS A+ ++G V+AWG +++G GL E + P K+ ++S
Sbjct: 374 ERLGL-RNVVHVAAGMFHSFAVDKNGDVWAWG--LNTYGQTGLDSSEEMIIRPQKVTALS 430
Query: 173 G-------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
+V+I G H + L G + G + +LG A + ++
Sbjct: 431 PKEHGGARVVQIEGGDAHSLFLFDNGEVWGVGRQDGNELGLAQDHPAQEGLKERRKEIQ- 489
Query: 226 GEVPLKRKHIDDVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEV-------QKSGNT 277
E K K ++ K +L +GE E ++
Sbjct: 490 EEREAKVKEAEEALEKASEDDKEDKQMKLLEAQAALRVPMGEYVPEPVRLSFTSDRADRQ 549
Query: 278 CFFTP-----HLIKSL------SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
F P ++ + + +++G H+LA++ G +YA+G + G+LGL
Sbjct: 550 IAFPPIPEAYEIVPDMPPWSEPATNPIARISAGTRHNLAVSKSGHVYAWGLGNQGQLGLG 609
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACG----NCVSFA 358
+V E + PT + S Q + ++ C +CV A
Sbjct: 610 SVEE-ASVPTLVRSKQLRPYDAVDCSAGGQHCVLIA 644
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE--------------PTPIPSL 341
+A+G H+LA++ G ++G +D LG ++P E P + +L
Sbjct: 204 IAAGGMHTLAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVVKAL 263
Query: 342 QDKTITS--IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+D+ + +A G+ VS A+ +EG L WG +F R +
Sbjct: 264 EDEGFRAVKVAAGDSVSVALSAEGGLRAWG-----------------------SF-RSNE 299
Query: 400 GRLGLKNVS-EPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G LG V P + TP +P+L I +ACG A+ S+G +Y WG G QLG
Sbjct: 300 GILGFDGVPGHPKFQFTPMELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQLG 359
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+E ++L V+ VA+G HS + K
Sbjct: 360 RRILARRAA-AGLEPERLGLRNVVHVAAGMFHSFAVDK 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
SEP T P I I+ G + A+ G +Y WG+GN QLG G ++ P
Sbjct: 569 SEPATNP----------IARISAGTRHNLAVSKSGHVYAWGLGNQGQLGLGSVEEASVPT 618
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
+ KQL Y + ++GGQH V++AK
Sbjct: 619 LVRSKQLRPYDAVDCSAGGQHCVLIAK 645
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 47/327 (14%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT-QRSASRNARRGMSFLEPGEVPLK 231
GI IA+G H + + G+ + G + LGR T + N + + P
Sbjct: 200 GIESIAAGGMHTLAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFV 259
Query: 232 RKHIDDV-FTGV-------YNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCF-F 280
K ++D F V + +S++G + A+G +N LG G+ F F
Sbjct: 260 VKALEDEGFRAVKVAAGDSVSVALSAEGGLRAWGSFRSNEGILGFDGV----PGHPKFQF 315
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
TP + +L+ + +A G H LAL S+G +Y +G +LG + ++
Sbjct: 316 TPMELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAGLEPER 375
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
L + + +A G SFA+D G ++ WG+ YG
Sbjct: 376 LGLRNVVHVAAGMFHSFAVDKNGDVWAWGLNT--------------------------YG 409
Query: 401 RLGLKNVSEPVTEPTPIPSLQDK-----TITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ GL + E + P + +L K + I G+ S + G ++G G +G +L
Sbjct: 410 QTGLDSSEEMIIRPQKVTALSPKEHGGARVVQIEGGDAHSLFLFDNGEVWGVGRQDGNEL 469
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQV 482
G ++ E +K K++ +V
Sbjct: 470 GLAQDHPAQEGLKERRKEIQEEREAKV 496
>gi|300706758|ref|XP_002995620.1| hypothetical protein NCER_101430 [Nosema ceranae BRL01]
gi|239604795|gb|EEQ81949.1| hypothetical protein NCER_101430 [Nosema ceranae BRL01]
Length = 362
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTWGCN 96
V G Q GLG D + DN+ +V G +HT+ LTED K+++WGCN
Sbjct: 3 VYVFGSNAISQFGLGEDYTSTHIPQQIPFFDNIKIKKVKCGTIHTLVLTEDNKLFSWGCN 62
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
DE ALGR + EF PQ V LP+K + I+ G S S + E V+ WG+FR+ +G G
Sbjct: 63 DEYALGRSGD---EFYPQEVILPEKPIDIACGTSISACITEKNNVFVWGTFRNFNGVYGF 119
Query: 157 -KGEGIQKTPLKLESVSGIVKIAS---GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
K IQKTP K+ + K S G++ +L + T G + +LGR RS+
Sbjct: 120 DKNTKIQKTPKKITTKFEKFKFTSIECGSNFVCLLDKNKIIWTFGSNDFNELGR---RSS 176
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDD-----VFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
R+ S L PG++ RK ++ V G + I++ + A+G N Y QLG
Sbjct: 177 LRSKD---SSLFPGQIFSSRKKNENHKFRLVRCGRNHALAINTDNEVYAWGSNIYGQLGI 233
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ K+ + I ++ D A G HHSL L +GK+Y G +D G+LG+
Sbjct: 234 GNDHETKNKHKI-----NISNVMDA-----AGGLHHSLFLTFDGKLYGAGNNDQGQLGI 282
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 163/398 (40%), Gaps = 80/398 (20%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
TVY +GS S +G Q+ P +++ I K+ G H ++LT L +
Sbjct: 2 TVYVFGSNAISQFGLGEDYTSTHIPQQIPF-FDNIK-IKKVKCGTIHTLVLTEDNKLFSW 59
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
GC ++ LGR G F P EV L K ID + I+ K ++ +
Sbjct: 60 GCNDEYALGR-----------SGDEFY-PQEVILPEKPIDIACGTSISACITEKNNVFVW 107
Query: 257 G-LNNYSQL--GEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKI 312
G N++ + + ++++QK TP I + +K KFT + G + L+ I
Sbjct: 108 GTFRNFNGVYGFDKNTKIQK-------TPKKITTKFEKFKFTSIECGSNFVCLLDKNKII 160
Query: 313 YAFGRHDYGRLGLKNV---SEPVTEPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVL 365
+ FG +D+ LG ++ + P I S + K + CG + AI+++ +
Sbjct: 161 WTFGSNDFNELGRRSSLRSKDSSLFPGQIFSSRKKNENHKFRLVRCGRNHALAINTDNEV 220
Query: 366 YGW--------GMGNGYQLGNGKEDDI---------------LNSEGKIYAFGRHDYGRL 402
Y W G+GN ++ N + +I L +GK+Y G +D G+L
Sbjct: 221 YAWGSNIYGQLGIGNDHETKNKHKINISNVMDAAGGLHHSLFLTFDGKLYGAGNNDQGQL 280
Query: 403 GL---KNVSEP---VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G+ N P + + S ++ +I I + SF I G G G++
Sbjct: 281 GILGKNNCHSPELIIENVKKVKSYENYSICQID-NSLFSFGISFLG-------GTGFE-- 330
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
E +IL P KI +L A G ++++ K
Sbjct: 331 ---EVEILTPRKIP---FEFPEILDFAVGSNFTIVVTK 362
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 211/491 (42%), Gaps = 73/491 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G TGQLG G + R A V L + V H + + +DG V++WG
Sbjct: 372 GDGTVWAWGSNSTGQLGDGT-TISRSRPAQVNALSGITAVSASSDHALAMRDDGTVWSWG 430
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG E IP V+ ++AG+SHSV++ EDG +AWG +R M
Sbjct: 431 KNTNGKLGDETTAH-RLIPVQVHGLSGVRSVAAGESHSVSVREDGKAWAWG-YR----GM 484
Query: 155 GLKGEG---IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL G+G + P++ ++ +IAS + + + L G G LG +
Sbjct: 485 GLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLGDLGDGST-- 542
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSILAFGLNNYSQLGEA 267
G P+ +DDV Y+ + + GS+ A+G N+ QLG+
Sbjct: 543 --------------GAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDG 588
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ T TP + L + A+ SLAL S+G ++A+G + G+LG +
Sbjct: 589 ST-------TNRLTPVPVNGL--ENVVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGS 639
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---- 383
+ TP P I +A S A+ ++G ++ WG + QLG+G +
Sbjct: 640 T---INRSTPGPVGGLVHIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKP 696
Query: 384 --------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
++ G ++A+G + G+LG ++ +T P + L
Sbjct: 697 VQVSGLSGVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLT-PVLVSGLSG- 754
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+ ++A GN A+ ++G ++ WG QLG+G P+++ G V +A
Sbjct: 755 -VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQVRGLS----DVKLIA 809
Query: 484 SGGQHSVILAK 494
+G HS+ + K
Sbjct: 810 AGENHSMAVRK 820
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 208/467 (44%), Gaps = 56/467 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G D GQLG G R V L + V H++ + +DG V+ WG N
Sbjct: 159 GTVWAWGPNDYGQLGDGT-TTNRPVPVQVGGLSGIRAVAASSDHSLAVRDDGTVWAWGIN 217
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D P V +++AGD +S+A+ DGTV+AWG +S G +G
Sbjct: 218 SSGQLGDGTTND-RLTPVQVAGLSSIKRVAAGDGYSLAVHGDGTVWAWG--INSSGQLGD 274
Query: 157 KGEGIQKTPLKLESVSGIVKIAS------GADHFVMLTSRGNLLTAGCPEQGQLG----- 205
+ TP +++ +S +V++++ G+ H + + G + G GQLG
Sbjct: 275 GTTTDRLTPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTT 334
Query: 206 -RITQRSASRNARRGMSFLEPG-EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
R+T S G+ + G PL + G Y+ + G++ A+G N+ Q
Sbjct: 335 DRLTPVQVSE--LDGVKAIAVGNSFPLSNSN------GSYSLAVRGDGTVWAWGSNSTGQ 386
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG+ + + +S P + +LS T +++ H+LA+ +G ++++G++ G+L
Sbjct: 387 LGDG-TTISRS------RPAQVNALS--GITAVSASSDHALAMRDDGTVWSWGKNTNGKL 437
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--- 380
G + + + P + L + S+A G S ++ +G + WG LG+G
Sbjct: 438 GDETTAHRLI-PVQVHGLSG--VRSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFL 494
Query: 381 -----EDDILNSEGKIYAFGRHD-----------YGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ L + +I + G +G L ++ + T P+PS
Sbjct: 495 SFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDD 554
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ ++A GN S A+ + G L+ WG + QLG+G + L P+ + G
Sbjct: 555 VKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNG 601
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 27/316 (8%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
LD+V V G +++ + +G ++ WG N G LG + + P VN + V +A
Sbjct: 552 LDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLG-DGSTTNRLTPVPVNGLENVVGAAA 610
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
S S+AL DGTV+AWG +S G +G + TP + + IV +A+ H + L
Sbjct: 611 SFSVSLALRSDGTVWAWG--LNSVGQLGDGSTINRSTPGPVGGLVHIVGVATSGGHSLAL 668
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ G + G GQLG T + + + G+S ++ +
Sbjct: 669 RNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIVSS-----------AV 717
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ G++ A+G N QLG+ + T TP L+ LS K LASG HH LAL
Sbjct: 718 VRDNGTVWAWGDNYSGQLGDGTT-------TDRLTPVLVSGLSGVK--ALASGNHHFLAL 768
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++G ++A+G + Y +LG ++ T P + L D + IA G S A+ +G ++
Sbjct: 769 RNDGTVWAWGDNYYSQLGDGTRTQRST-PVQVRGLSDVKL--IAAGENHSMAVRKDGTVW 825
Query: 367 GWGMGNGYQLGNGKED 382
WG+ QLGNG D
Sbjct: 826 TWGLNTSGQLGNGLLD 841
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 174/379 (45%), Gaps = 62/379 (16%)
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
A ++ G H++ L DGTV+AWG + +G +G + P+++ +SGI +A+ +
Sbjct: 142 APAVAVGTQHTLLLRPDGTVWAWGP--NDYGQLGDGTTTNRPVPVQVGGLSGIRAVAASS 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP----LKRKHIDD 237
DH + + G + G GQLG + N R L P +V +KR D
Sbjct: 200 DHSLAVRDDGTVWAWGINSSGQLG-----DGTTNDR-----LTPVQVAGLSSIKRVAAGD 249
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD------K 291
Y+ + G++ A+G+N+ QLG+ + T TP +K LS+
Sbjct: 250 ----GYSLAVHGDGTVWAWGINSSGQLGDGTT-------TDRLTPGRVKGLSEVVEVSAA 298
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K+++L G H LA+ +G ++A+G + G+LG ++ + TP+ + + +IA
Sbjct: 299 KYSLL--GSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRL---TPVQVSELDGVKAIAV 353
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
GN SF + + NG + +G ++A+G + G+LG +
Sbjct: 354 GN--SFPLSNS---------------NGSYSLAVRGDGTVWAWGSNSTGQLG-DGTTISR 395
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ P + +L IT+++ + + A+ +G ++ WG +LG+ L P+++ G
Sbjct: 396 SRPAQVNALSG--ITAVSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHG 453
Query: 472 KQLNNYTVLQVASGGQHSV 490
V VA+G HSV
Sbjct: 454 LS----GVRSVAAGESHSV 468
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 104/244 (42%), Gaps = 42/244 (17%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G + R T V L ++V V G H++ L DG V+ WG N
Sbjct: 622 GTVWAWGLNSVGQLGDG-STINRSTPGPVGGLVHIVGVATSGGHSLALRNDGTVWAWGGN 680
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISA---------GDSHSVALLEDGTVYAWGSF 147
+G LG T N PK VQ+S S + ++GTV+AWG
Sbjct: 681 HDGQLGDG---------TTTNQPKP-VQVSGLSGVKAVAAAIVSSAVVRDNGTVWAWGD- 729
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--G 205
+ G +G + TP+ + +SG+ +ASG HF+ L + G + G QL G
Sbjct: 730 -NYSGQLGDGTTTDRLTPVLVSGLSGVKALASGNHHFLALRNDGTVWAWGDNYYSQLGDG 788
Query: 206 RITQRSASRNARRGMS---FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
TQRS RG+S + GE ++ + G++ +GLN
Sbjct: 789 TRTQRSTPVQV-RGLSDVKLIAAGE--------------NHSMAVRKDGTVWTWGLNTSG 833
Query: 263 QLGE 266
QLG
Sbjct: 834 QLGN 837
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 182/401 (45%), Gaps = 75/401 (18%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V+ G G+ GQLGLG + E++ +VE L+ V VV G +++ + +DG ++TWG N
Sbjct: 7 VIAWGSGEDGQLGLGTN-DEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E IP V K VQ + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLK-GEGIQKTPLKLESVSG--------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G + G+ + PL+ + V + ++A+G H V+LT G++ + G P G
Sbjct: 124 GEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQPW--PPG 181
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNY 261
I Q S +P++ + +++V +N + G++ A+G N Y
Sbjct: 182 DIKQIS----------------IPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEY 225
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D++ + P ++ L +A+G HS AL +G++Y +GR ++G
Sbjct: 226 GQLGTGDTQPRSQ-------PIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 278
Query: 322 RLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG N P + L + I ++CG S A+
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL--------------------- 317
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIP 418
+G+I++FGR D+GRLG +P+ P IP
Sbjct: 318 -----TRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIP 353
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 34/317 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G + T G G LG P+ + V+ L NV V+ +GG H + + + G+ Y WG
Sbjct: 57 GTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 95 CNDEGALGREAEGDSEFIP--QTVNLPKKAV------QISAGDSHSVALLEDGTVYAWGS 146
N+ G G E D P + + +PK+ Q++AG +HSV L +G V++WG
Sbjct: 117 GNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQ 176
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ P++++ + + IA GA H + L G L G E GQLG
Sbjct: 177 PWPPGDIKQIS------IPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGT 230
Query: 207 -ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
TQ + +G+ L +D G ++T ++ KG + +G + +LG
Sbjct: 231 GDTQPRSQPIPVQGLDSL---------TLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D++ + P + L+ + ++ G HS+AL +G+I++FGR D+GRLG
Sbjct: 282 FGDND-----KSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGC 336
Query: 326 KN---VSEPVTEPTPIP 339
+P+ P IP
Sbjct: 337 GRKVTTGQPLDVPVKIP 353
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 192/428 (44%), Gaps = 66/428 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + E++ L AV+ + +G +S+A+ +DGT++ WG
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGW-- 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + P ++++++ IV+ A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 RITQRS-ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ R RR + + L + + G ++ ++ +G + ++G
Sbjct: 125 EEPGKDEMERPLRRDIVIPKRCAPKLVVRQV--AAGGTHSVVLTREGHVWSWG------- 175
Query: 265 GEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ G+ + P ++ L + + ++A G H+LAL G ++A+G ++YG+L
Sbjct: 176 -----QPWPPGDIKQISIPVRVQGLENVR--LIAVGAFHNLALEENGTLWAWGNNEYGQL 228
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P ++P P+ L T+ IA G S A+ +G +YGW
Sbjct: 229 GTGD-TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGW--------------- 272
Query: 384 ILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
GR ++GRLG N P + L + I ++CG S A+ +G
Sbjct: 273 -----------GRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDG 321
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGK------QLNN--------YTVLQVASGGQH 488
++ +G G+ +LG G++ +P+ + K Q N+ + VA GG+H
Sbjct: 322 RIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRH 381
Query: 489 SVILAKPK 496
++ + + K
Sbjct: 382 TLAIVEWK 389
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 149/337 (44%), Gaps = 47/337 (13%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ + ++ G E GQLG T + + + +E L+ + V +G N+
Sbjct: 1 MAASTTVIAWGSGEDGQLGLGTN-----DEKEWVCVVEA----LEPYAVRSVVSGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I G++ +G N LG K+ N P +K+L++ K A G H LA
Sbjct: 52 AICDDGTLFTWGWNQRGTLGHPPE--TKTENI----PSQVKALANVKIVQAAIGGWHCLA 105
Query: 306 LNSEGKIYAFGRHDYGRLGLK----NVSEPVTEPTPIPS--LQDKTITSIACGNCVSFAI 359
++ +G+ YA+G ++YG+ G + + P+ IP + +A G S +
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVL 165
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFGRH 397
EG ++ WG + G+ K+ I L G ++A+G +
Sbjct: 166 TREGHVWSWG--QPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNN 223
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+YG+LG + ++P ++P P+ L T+ IA G S A+ +G +YGWG G +LG
Sbjct: 224 EYGQLGTGD-TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGF 282
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G D + + + L ++QV+ GG HSV L +
Sbjct: 283 GDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTR 319
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 171/368 (46%), Gaps = 58/368 (15%)
Query: 38 VVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
VL G G+ GQLG+G D +R D V VV G +++ + +DG ++TWG N
Sbjct: 9 AVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWN 68
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSF------- 147
G LG E +E P V+ + K VQ + G H +A+ + G YAWG
Sbjct: 69 QRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGE 128
Query: 148 ---RDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R G+ L+ + Q+ LKL+ + ++A+G H V+LT G++ T G P
Sbjct: 129 EPERKEDGTRALRRDIPIPQRCALKLK----VRQVAAGGTHSVVLTQEGHVWTWGQP--- 181
Query: 203 QLGRITQRSASRNARRGMSFLEPGEV-----PLKRKHIDDV----FTGVYNTFISSKGSI 253
PG++ P++ + ++ V +N +S +
Sbjct: 182 --------------------WPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRIL 221
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
A+G N Y QLG D++ + P ++ LS+ +A+G HS AL EG++Y
Sbjct: 222 WAWGNNEYGQLGIGDTQPRSQ-------PIRVEGLSNLSLVDIAAGGWHSAALTKEGEVY 274
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
A+GR ++GRLG + P + L + I ++CG S + S+G ++ +G G+
Sbjct: 275 AWGRGEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDH 334
Query: 374 YQLGNGKE 381
+LG+G++
Sbjct: 335 GRLGDGRK 342
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 192/423 (45%), Gaps = 69/423 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + + L AV + AG +S+A+ +DG+++ WG
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWG--W 67
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + +P ++++ G IV+ A G H + + +G G E GQ G
Sbjct: 68 NQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 127
Query: 206 RITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+R +R RR + P LK K G ++ ++ +G + +G
Sbjct: 128 EEPERKEDGTRALRRDIPI--PQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWG------ 179
Query: 264 LGEADSEVQKSGNT-CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ G+ TP ++ L ++ +M+A G H+LAL+ + ++A+G ++YG+
Sbjct: 180 ------QPWPPGDIKNISTPVRVQGL--EQVSMIAVGAFHNLALSVDRILWAWGNNEYGQ 231
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG+ + ++P ++P + L + ++ IA G S A
Sbjct: 232 LGIGD-TQPRSQPIRVEGLSNLSLVDIAAGGWHSAA------------------------ 266
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L EG++YA+GR ++GRLG + P + L + I ++CG S + S+G
Sbjct: 267 --LTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDG 324
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKI-------------EGKQLNNYTVLQVASGGQHS 489
++ +G G+ +LG+G++ PM++ EG NY VA GG+H+
Sbjct: 325 RIFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANY----VACGGRHT 380
Query: 490 VIL 492
+ +
Sbjct: 381 LAI 383
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 52/278 (18%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++LA+G QLG + +K C I +L + + +G +SLA+ +G
Sbjct: 9 AVLAWGSGEDGQLGMGGCD-EKDRARC------ICALDAYAVSAVVAGSRNSLAICDDGS 61
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + G LG ++ + P + +L I A G A+D +G Y WG G
Sbjct: 62 LFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWG-G 120
Query: 372 NGY-QLGN----------------------------------GKEDDILNSEGKIYAFGR 396
N Y Q G G +L EG ++ +G+
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQ 180
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ +KN+S PV + L+ ++ IA G + A+ + +L+ WG QLG
Sbjct: 181 -PWPPGDIKNISTPVR----VQGLEQ--VSMIAVGAFHNLALSVDRILWAWGNNEYGQLG 233
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +P+++EG L+N +++ +A+GG HS L K
Sbjct: 234 IGDTQPRSQPIRVEG--LSNLSLVDIAAGGWHSAALTK 269
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D V+ L +++V+V GG H+V LT DG+++++G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYG 330
Query: 95 CNDEGALG---REAEGDSEFIPQTVNLPK---------KAVQISAGDSHSVALL 136
D G LG + G +P + PK +A ++ G H++A++
Sbjct: 331 RGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAIV 384
>gi|409079646|gb|EKM80007.1| hypothetical protein AGABI1DRAFT_72781 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 586
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 188/417 (45%), Gaps = 81/417 (19%)
Query: 38 VVLTCGQGDTGQLGLGPDVME-----RKTFALVEDLDN---------VVEVVVGGMHTVC 83
++ G G+ GQ G+GPDV++ ++ + E + + V GG+HT+
Sbjct: 148 ILFVFGAGNFGQFGMGPDVLDSLTKPKRNQWVEEQISKGTFGEVGAGITAVAGGGLHTLF 207
Query: 84 LTEDGKVYTWGCNDEGALGR--------EAEGDSEFIPQTVNLPK----------KAVQI 125
E G V++ G ND ALGR + EG + + P+ +AV +
Sbjct: 208 ADEKGTVWSCGANDNAALGRITTDVPDPDNEGSFLDVDDLTSWPRPLQTLVDEHFRAVLV 267
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVS-------GIVKI 177
+AGDS + + G + WG+FR G++G G+ Q P + ++S + +
Sbjct: 268 AAGDSIGAVVSDQGELRVWGTFRGMEGALGFSDGKDKQHLPTPILTLSHKPGDYEKVSSV 327
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL---KRKH 234
A+G +H V++T+ G+L T G EQGQLGR RR + P ++ L RK
Sbjct: 328 AAGNNHLVIVTTHGHLYTLGVGEQGQLGRKILE------RRKIHGTHPEKICLGTRSRKA 381
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ V G Y++F I + +GLN Q G S + C P ++SLS +
Sbjct: 382 VK-VAAGSYHSFAIDDNDDVWGWGLNTMGQTGTGWSS---RDDDCVHFPQKVESLSRESL 437
Query: 294 T-----MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-------------- 334
+ +A+G+HH++ L + GK+Y+ GR D +LGL++ + + E
Sbjct: 438 SGDTVVQIAAGEHHTIFLTAAGKVYSCGRMDGSQLGLEDDNPAIIEWKEKYAEMFDGAVP 497
Query: 335 ---PTP----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
PTP P D + I+ G + + G L WG G +LG G ++++
Sbjct: 498 QFLPTPTEVAFPDADD-AVVQISTGVHNNAVVTRGGALLTWGQGIQGELGCGDDEEV 553
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 162/404 (40%), Gaps = 89/404 (22%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
+GI +A G H + +G + + G + LGRIT + SFL+ ++
Sbjct: 193 AGITAVAGGGLHTLFADEKGTVWSCGANDNAALGRITTDVPDPDNE--GSFLDVDDLTSW 250
Query: 229 --PLKRKHIDDVFTGVY-------NTFISSKGSILAFGLNNYSQ--LGEADSEVQKSGNT 277
PL+ +D+ F V +S +G + +G + LG +D G
Sbjct: 251 PRPLQ-TLVDEHFRAVLVAAGDSIGAVVSDQGELRVWGTFRGMEGALGFSD------GKD 303
Query: 278 CFFTPHLIKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
P I +LS K K + +A+G +H + + + G +Y G + G+LG K +
Sbjct: 304 KQHLPTPILTLSHKPGDYEKVSSVAAGNNHLVIVTTHGHLYTLGVGEQGQLGRKILERRK 363
Query: 333 ---TEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---KEDD-- 383
T P I + + +A G+ SFAID ++GWG+ Q G G ++DD
Sbjct: 364 IHGTHPEKICLGTRSRKAVKVAAGSYHSFAIDDNDDVWGWGLNTMGQTGTGWSSRDDDCV 423
Query: 384 ------------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
L + GK+Y+ GR D +LGL++ + + E
Sbjct: 424 HFPQKVESLSRESLSGDTVVQIAAGEHHTIFLTAAGKVYSCGRMDGSQLGLEDDNPAIIE 483
Query: 414 -----------------PTP----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
PTP P D + I+ G + + G L WG G
Sbjct: 484 WKEKYAEMFDGAVPQFLPTPTEVAFPDADD-AVVQISTGVHNNAVVTRGGALLTWGQGIQ 542
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+LG G ++++ P + K ++ + V+ GGQH++ L K K
Sbjct: 543 GELGCGDDEEVETPKVVVRKDGGSWFAVAVSCGGQHTLGLLKKK 586
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 34 TGGGVVLTCGQGDTGQLGL---GPDVMERK-------------------TFALVEDLDNV 71
T G V +CG+ D QLGL P ++E K A + D V
Sbjct: 456 TAAGKVYSCGRMDGSQLGLEDDNPAIIEWKEKYAEMFDGAVPQFLPTPTEVAFPDADDAV 515
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK------AVQI 125
V++ G + +T G + TWG +G LG GD E + + +K AV +
Sbjct: 516 VQISTGVHNNAVVTRGGALLTWGQGIQGELGC---GDDEEVETPKVVVRKDGGSWFAVAV 572
Query: 126 SAGDSHSVALLE 137
S G H++ LL+
Sbjct: 573 SCGGQHTLGLLK 584
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 222/507 (43%), Gaps = 59/507 (11%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTC-GQGDTGQLGLGPDVMERKTFALVEDLDN-VVEV 74
S+ +T+ V T TGGGV TC G +GQLG G ER T V L + V +
Sbjct: 260 SEVAAITAGDVYTCALTTGGGV--TCWGANWSGQLGDG-TTDERSTPVDVVGLSSGVTAI 316
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSV 133
G HT +T G V WG N LG + + P VN L +A I+AGD H+
Sbjct: 317 AAGNDHTCAITTGGGVSCWGVNQYSQLG-DGTTTQQSTPVVVNGLSSRAAAIAAGDGHTC 375
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGN 192
A+ G V WG R+ G +G ++TP+++E +S G+ I +G H L++ G
Sbjct: 376 AMTTGGGVSCWG--RNWSGQLGDGTTTQRRTPMQVEGLSSGVADITAGDSHTCALSTEGG 433
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS 252
+ G E GQLG T + R+ + L G V + + +S++G
Sbjct: 434 VTCWGNNESGQLGDGT--TIQRSTPVQVEGLSSGVVAITAGD-------SHTCALSTEGG 484
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G N QLG + Q+S TP ++ LS + A G H+ AL + G +
Sbjct: 485 VTCWGGNGSGQLGNG-TTTQRS------TPVQVEGLSSGVMAITA-GDSHTCALTTGGGV 536
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+G + YG+LG ++ P + L + +IA G + A+ +EG + WG
Sbjct: 537 TCWGGNWYGQLGDGTTTQR-NMPVNVVGLSSG-VAAIAAGGSHTCALSTEGGVTCWGWNT 594
Query: 373 GYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGRLGLKNV 407
QLG+G + L + G++ +G + YG+LG
Sbjct: 595 YDQLGDGTRTNHNTPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTT 654
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
++ +T P + L + + +I G + A+ + G + WG YQLGNG PM
Sbjct: 655 TQRMT-PVVVNGLSSE-VAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPM 712
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
++G V +A+G H+ L+
Sbjct: 713 DVDGLSSG---VAALAAGDAHTCGLST 736
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 208/484 (42%), Gaps = 60/484 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGCND 97
V+ G + GQLG G + +R T V L + VV + G HT LT G V WG N+
Sbjct: 77 VICWGNNEFGQLGDGTTI-QRNTPVAVNGLSSGVVAIAAGYAHTCALTTSGGVSCWGNNE 135
Query: 98 EGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G LG Q L I+AG+ H+ AL DG V WGS + +G +G
Sbjct: 136 SGQLGNGITIQRRTPVQVAGLSSGVAAIAAGEYHTCALTTDGAVTCWGS--NGYGQLGDG 193
Query: 158 GEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASR 214
+ TP+++ +S G+ I +G H LT+ G + G GQLG TQRS
Sbjct: 194 TTTQRSTPVQVAGLSSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRS--- 250
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
P V + + G VY +++ G + +G N QLG+ ++ +
Sbjct: 251 ---------TPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERS 301
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
TP + LS T +A+G H+ A+ + G + +G + Y +LG ++ T
Sbjct: 302 -------TPVDVVGLS-SGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQST 353
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED----------- 382
P + L + +IA G+ + A+ + G + WG QLG+G
Sbjct: 354 -PVVVNGLSSRA-AAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGL 411
Query: 383 -----DI---------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
DI L++EG + +G ++ G+LG + T P + L + +I
Sbjct: 412 SSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRST-PVQVEGLSSGVV-AI 469
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
G+ + A+ +EG + WG QLGNG P+++EG V+ + +G H
Sbjct: 470 TAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSG---VMAITAGDSH 526
Query: 489 SVIL 492
+ L
Sbjct: 527 TCAL 530
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 212/507 (41%), Gaps = 59/507 (11%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTC-GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
S V + + T T GGV +C G ++GQLG G + R + V +
Sbjct: 107 SGVVAIAAGYAHTCALTTSGGV--SCWGNNESGQLGNGITIQRRTPVQVAGLSSGVAAIA 164
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
G HT LT DG V WG N G LG Q L I+AG SH+ AL
Sbjct: 165 AGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCAL 224
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLL 194
G V WG R+ +G +G + TP+ + +S + I +G + LT+ G +
Sbjct: 225 TTGGAVTCWG--RNGNGQLGDGTTTQRSTPVNVLGLSSEVAAITAGDVYTCALTTGGGVT 282
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSI 253
G GQLG T S P +V + + G +T I++ G +
Sbjct: 283 CWGANWSGQLGDGTTDERS----------TPVDVVGLSSGVTAIAAGNDHTCAITTGGGV 332
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G+N YSQLG+ + Q TP ++ LS + +A+G H+ A+ + G +
Sbjct: 333 SCWGVNQYSQLGDGTTTQQS-------TPVVVNGLSSRA-AAIAAGDGHTCAMTTGGGVS 384
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+GR+ G+LG ++ T P + L + I G+ + A+ +EG + WG
Sbjct: 385 CWGRNWSGQLGDGTTTQRRT-PMQVEGLSSG-VADITAGDSHTCALSTEGGVTCWGNNES 442
Query: 374 YQLGNG-------------------------KEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
QLG+G L++EG + +G + G+LG +
Sbjct: 443 GQLGDGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTT 502
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPM 467
+ T P + L + +I G+ + A+ + G + WG GN Y QLG+G P+
Sbjct: 503 QRST-PVQVEGLSSG-VMAITAGDSHTCALTTGGGVTCWG-GNWYGQLGDGTTTQRNMPV 559
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
+ G V +A+GG H+ L+
Sbjct: 560 NVVGLSSG---VAAIAAGGSHTCALST 583
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 58/399 (14%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESV-SGIVKIASGAD 182
I+AGD+++ AL + V WG + G +G G IQ+ TP+ + + SG+V IA+G
Sbjct: 61 IAAGDAYTCALTTNSAVICWG--NNEFGQLG-DGTTIQRNTPVAVNGLSSGVVAIAAGYA 117
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H LT+ G + G E GQLG IT + RR P +V + + G
Sbjct: 118 HTCALTTSGGVSCWGNNESGQLGNGITIQ------RR-----TPVQVAGLSSGVAAIAAG 166
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y+T +++ G++ +G N Y QLG+ + Q+S TP + LS T + +G
Sbjct: 167 EYHTCALTTDGAVTCWGSNGYGQLGDG-TTTQRS------TPVQVAGLS-SGVTAITAGG 218
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H+ AL + G + +GR+ G+LG ++ T P + L + + +I G+ + A+
Sbjct: 219 SHTCALTTGGAVTCWGRNGNGQLGDGTTTQRST-PVNVLGLSSE-VAAITAGDVYTCALT 276
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFG 395
+ G + WG QLG+G D+ + + G + +G
Sbjct: 277 TGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWG 336
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ Y +LG ++ T P + L + +IA G+ + A+ + G + WG QL
Sbjct: 337 VNQYSQLGDGTTTQQST-PVVVNGLSSRA-AAIAAGDGHTCAMTTGGGVSCWGRNWSGQL 394
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G+G PM++EG V + +G H+ L+
Sbjct: 395 GDGTTTQRRTPMQVEGLSSG---VADITAGDSHTCALST 430
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 166/373 (44%), Gaps = 28/373 (7%)
Query: 12 QAENPSQKVF-VTSEAVPTLKCKTGGGVVLTC-GQGDTGQLGLGPDVMERKTFALVEDLD 69
Q E S V +T+ T T GGV TC G ++GQLG G + +R T VE L
Sbjct: 407 QVEGLSSGVADITAGDSHTCALSTEGGV--TCWGNNESGQLGDGTTI-QRSTPVQVEGLS 463
Query: 70 N-VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAG 128
+ VV + G HT L+ +G V WG N G LG Q L + I+AG
Sbjct: 464 SGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSGVMAITAG 523
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVML 187
DSH+ AL G V WG + +G +G + P+ + + SG+ IA+G H L
Sbjct: 524 DSHTCALTTGGGVTCWGG--NWYGQLGDGTTTQRNMPVNVVGLSSGVAAIAAGGSHTCAL 581
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
++ G + G QLG T+ + N + L G + + + +
Sbjct: 582 STEGGVTCWGWNTYDQLGDGTRT--NHNTPVQVEGLSSGVAAIAAGY-------AHTCAL 632
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G + +G N Y QLG+ + Q+ TP ++ LS + ++A G H+ AL+
Sbjct: 633 ITSGEVTCWGWNWYGQLGDG-TTTQR------MTPVVVNGLSSEVAAIVA-GYAHTCALS 684
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+ G + +G + Y +LG +S+ + P + L + ++A G+ + + + G +
Sbjct: 685 TGGGVTCWGWNKYYQLGNGTISQR-SIPMDVDGLSSG-VAALAAGDAHTCGLSTGGGVTC 742
Query: 368 WGMGNGYQLGNGK 380
WG QLG G
Sbjct: 743 WGWDVYGQLGVGT 755
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 143/335 (42%), Gaps = 30/335 (8%)
Query: 5 LKKVLRKQAENPSQKVF-VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+++ Q E S V +T+ T T GGV G G +GQLG G +R T
Sbjct: 451 IQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNG-SGQLGNG-TTTQRSTPV 508
Query: 64 LVEDLDN-VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
VE L + V+ + G HT LT G V WG N G LG V L
Sbjct: 509 QVEGLSSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGV 568
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIASGA 181
I+AG SH+ AL +G V WG +++ +G TP+++E +S G+ IA+G
Sbjct: 569 AAIAAGGSHTCALSTEGGVTCWG--WNTYDQLGDGTRTNHNTPVQVEGLSSGVAAIAAGY 626
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
H L + G + G GQLG TQR + P V + +
Sbjct: 627 AHTCALITSGEVTCWGWNWYGQLGDGTTTQR------------MTPVVVNGLSSEVAAIV 674
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +T +S+ G + +G N Y QLG Q+S P + LS LA+
Sbjct: 675 AGYAHTCALSTGGGVTCWGWNKYYQLGNGTIS-QRS------IPMDVDGLS-SGVAALAA 726
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
G H+ L++ G + +G YG+LG+ ++ T
Sbjct: 727 GDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTT 761
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
S + T +A+G ++ AL + + +G +++G+LG + T P + L + +
Sbjct: 54 SAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNT-PVAVNGLSSG-VVA 111
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-------------------------KEDD 383
IA G + A+ + G + WG QLGNG
Sbjct: 112 IAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSGVAAIAAGEYHTC 171
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L ++G + +G + YG+LG ++ T P + L +T+I G + A+ + G
Sbjct: 172 ALTTDGAVTCWGSNGYGQLGDGTTTQRST-PVQVAGLSSG-VTAITAGGSHTCALTTGGA 229
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ WG QLG+G P+ + G
Sbjct: 230 VTCWGRNGNGQLGDGTTTQRSTPVNVLG 257
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 180/403 (44%), Gaps = 63/403 (15%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCN-----DEGALGREAEGDSEFIPQTVNLPKKAVQIS 126
V + G H++ + DG V+ WG + +EGAL R F P V V ++
Sbjct: 35 VPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRR------FAPVPVPGLSDIVSVA 88
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVM 186
AG +HS+A+ DGT++ WG + +G +G + P+++ +SG+ +A+G H +
Sbjct: 89 AGGAHSLAVRADGTLWTWGG--NPYGQLGDGTTTARALPVQVAGLSGVRAVATGLGHSLA 146
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
L + G + G + GQLG T +L P +P G ++
Sbjct: 147 LRADGTVWAWGLNQFGQLGDGTT----------SQWLTPRPIPGLSGVRSVAAGGFHSLV 196
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ ++ A+G N+Y +LG+ + + P I L + +A G +HSLA+
Sbjct: 197 VRDDDTVWAWGSNDYGELGDGSTSRRA-------VPRAIPGL--RNVASVAGGCYHSLAV 247
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+++G + A+G + YG+LG S T P P+P L + +A S A+ +EG ++
Sbjct: 248 HADGTLSAWGLNSYGQLGDGTFSNRAT-PRPVPGLSG--VRCVATSFFHSLALRAEGTVW 304
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
WG+ NGY G++ D G + P P P+P L +
Sbjct: 305 AWGL-NGY----GEQGD-------------------GTASRQSPT--PRPVPGLSG--VL 336
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
S+A G S A+++ G + WG QLG+G P+ +
Sbjct: 337 SVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 26/316 (8%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
V L ++V V GG H++ + DG ++TWG N G LG + + +P V
Sbjct: 78 VPGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLG-DGTTTARALPVQVAGLSGVRA 136
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
++ G HS+AL DGTV+AWG + G +G TP + +SG+ +A+G H
Sbjct: 137 VATGLGHSLALRADGTVWAWG--LNQFGQLGDGTTSQWLTPRPIPGLSGVRSVAAGGFHS 194
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+++ + G + G+LG +RR + PG +++ V G Y+
Sbjct: 195 LVVRDDDTVWAWGSNDYGELGD------GSTSRRAVPRAIPGL-----RNVASVAGGCYH 243
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ + + G++ A+GLN+Y QLG+ + TP + LS + +A+ HS
Sbjct: 244 SLAVHADGTLSAWGLNSYGQLGDGTFSNRA-------TPRPVPGLSGVR--CVATSFFHS 294
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL +EG ++A+G + YG G S P P+P L + S+A G S A+++ G
Sbjct: 295 LALRAEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPGLSG--VLSVATGTFHSLAVNTNG 352
Query: 364 VLYGWGMGNGYQLGNG 379
+ WG QLG+G
Sbjct: 353 TVSAWGHNGQGQLGDG 368
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 55/299 (18%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQG--QLGRITQRSASRNARRGMSFLEPGEVPLKR 232
V +++G H + + + G++ G G + G +++R A P VP
Sbjct: 35 VPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFA------------PVPVPGLS 82
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ G ++ + + G++ +G N Y QLG+ + T P + LS +
Sbjct: 83 DIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTT-------TARALPVQVAGLSGVR 135
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G HSLAL ++G ++A+G + +G+LG S+ +T P PIP L + S+A G
Sbjct: 136 --AVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLT-PRPIPGLSG--VRSVAAG 190
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
S + ++DD ++A+G +DYG LG + S
Sbjct: 191 GFHSLVV--------------------RDDDT------VWAWGSNDYGELGDGSTSRRAV 224
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P IP L++ + S+A G S A+ ++G L WG+ + QLG+G + P + G
Sbjct: 225 -PRAIPGLRN--VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPVPG 280
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 38/198 (19%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
L++G HSLA++++G ++A+G G L + P P+P L D I S+A G
Sbjct: 37 LSAGDSHSLAVHADGSVWAWGASASG-LREEGALSRRFAPVPVPGLSD--IVSVAAGGAH 93
Query: 356 SFAIDSEGVLYGWGMGNGY-QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
S A+ ++G L+ WG GN Y QLG+G
Sbjct: 94 SLAVRADGTLWTWG-GNPYGQLGDGTT-----------------------------TARA 123
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
P+ + ++A G S A+ ++G ++ WG+ QLG+G L P I G
Sbjct: 124 LPVQVAGLSGVRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLS- 182
Query: 475 NNYTVLQVASGGQHSVIL 492
V VA+GG HS+++
Sbjct: 183 ---GVRSVAAGGFHSLVV 197
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G R T V L V V H++ L +G V+ WG N
Sbjct: 251 GTLSAWGLNSYGQLGDG-TFSNRATPRPVPGLSGVRCVATSFFHSLALRAEGTVWAWGLN 309
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G G P+ V + ++ G HS+A+ +GTV AWG H G
Sbjct: 310 GYGEQGDGTASRQSPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWG-----HNGQGQ 364
Query: 157 KGEGI---QKTPLKL 168
G+G + TP+ +
Sbjct: 365 LGDGTATHRSTPVTV 379
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 197/439 (44%), Gaps = 79/439 (17%)
Query: 81 TVCLTEDGKVYTWGC--NDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLE 137
T+ ++G+ W C N G LG + + L +K + QI AG+ H+V L
Sbjct: 553 TIFHEDEGEREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTA 612
Query: 138 DGTVYAWGSFRDSHGSMGLKGEG----IQKTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
DG V+ G + +G G G + + P K++S S +G +H +++++ G +
Sbjct: 613 DGKVFTCGY--NDNGQCGQGGTARVSHLSEIP-KMDSGSSQAHAYNGCEHTILVSTDGRV 669
Query: 194 LTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
T G +GQLG T S + R L+ K + V Y+T ++ +
Sbjct: 670 ATCGYNYRGQLGHGNTTSESVPKIIR-----------SLENKIVRLVSCSYYHTVLACED 718
Query: 252 ----SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
++ FG N+Y QLG DS +K P +++LSD++ +A GQ+H++ +
Sbjct: 719 GNLQNLYTFGRNDYGQLGHNDSIDRK-------IPQFVEALSDQQIVSVACGQYHTMVVT 771
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+ GK +AFG++DYG+LG+ + + L+ + I CG + A
Sbjct: 772 ASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIA--------- 822
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL--KNVS---------EPVTEPTP 416
L S ++AFGR+DYG+LGL N S + +
Sbjct: 823 -----------------LCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARL 865
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE---GKQ 473
I L+ K I IACG + A+ GV+Y +G N QLG G + + P I+ GK+
Sbjct: 866 IDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR 925
Query: 474 LNNYTVLQVASGGQHSVIL 492
V VA+G H+V+L
Sbjct: 926 -----VALVAAGFYHTVVL 939
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 175/383 (45%), Gaps = 47/383 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V +CGQ G+LG G D RK+F ++ L ++++ G HTV LT DGKV+T G N
Sbjct: 564 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISA--GDSHSVALLEDGTVYAWG-SFRDSHGS 153
D G G+ + + + + Q A G H++ + DG V G ++R G
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG----NLLTAGCPEQGQLGRITQ 209
E + K LE + IV++ S + + +L NL T G + GQLG
Sbjct: 683 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH--- 737
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
R+ F+E L + I V G Y+T +++ G AFG N+Y QLG
Sbjct: 738 --NDSIDRKIPQFVE----ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDT 791
Query: 269 SEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-- 325
E Q P ++ L ++ + G +H++AL S ++AFGR+DYG+LGL
Sbjct: 792 MENQ-------LAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGR 844
Query: 326 KNVS---------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
N S + + I L+ K I IACG + A+ GV+Y +G N QL
Sbjct: 845 SNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQL 904
Query: 377 GNGKEDDILNSEGKIYAFGRHDY 399
G G ++ ++Y F D+
Sbjct: 905 GTG------DTTERVYPFPIDDF 921
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T G V TCG D GQ G G V ++ + G HT+ ++ DG+V
Sbjct: 611 TADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVA 670
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSF-R 148
T G N G LG SE +P+ + +L K V+ +S H+V EDG + +F R
Sbjct: 671 TCGYNYRGQLG-HGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 729
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ +G +G +K P +E++S IV +A G H +++T+ G G + GQLG
Sbjct: 730 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI 789
Query: 207 ITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
T + L P +V L+R+ ++ G Y+T + S + AFG N+Y Q
Sbjct: 790 DTMENQ----------LAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQ 839
Query: 264 LGEADSEVQKSGN-----TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
LG S + N F LI L K +A G +H++A++ G +Y FGR+
Sbjct: 840 LGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRN 899
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
++G+LG + +E V P PI K + +A G
Sbjct: 900 NHGQLGTGDTTERVY-PFPIDDFVGKRVALVAAG 932
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 184/408 (45%), Gaps = 56/408 (13%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTF---ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V + G+G+ GQLGLG + + AL E +V++ G HTV LT++G+VYTWG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER--RIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 96 NDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
D+G LG G +F+P+ V K Q++ G H+ A+ G +Y WG +G
Sbjct: 61 GDDGRLGHGDNG-WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG--GMYGK 117
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G E TP +E++ G + ++A G+ H V+L ++ T G E G G
Sbjct: 118 LGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG------ 171
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGSILAFGLNNYSQLGEADSE 270
G +L L+ K+I + G + +S G + FG + +LG
Sbjct: 172 --HGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
Q +++L+ K+ +A G H+ A+ G++Y +G ++G+LG +
Sbjct: 230 NQP-------VARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVN 282
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK 390
T PT + SL +K + I CG + A+ G +Y WG G
Sbjct: 283 K-TVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNG------------------- 322
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
D+G+LG N + VT P + L+ K + S+A N + A+
Sbjct: 323 -------DHGKLG-HNDTTKVTLPKLVDVLEGKRVISVASYNEHTVAL 362
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 178/411 (43%), Gaps = 53/411 (12%)
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY+WG ++G LG D +P ++ VQI+ G H+V L ++G VY WG R
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWG--R 60
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +G G + P +E + G I ++ G+ H +T G+L T G G+LG
Sbjct: 61 GDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG-SILAFGLNNYSQLG 265
+ S FL LK + V G +T + + + +G G
Sbjct: 121 GNETGHS------TPFLVE---TLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D+E + + P ++ L K +++ H+ AL+ G+++ FG +GRLG
Sbjct: 172 HGDTEGHQ------YLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGH 225
Query: 326 KN-VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ ++PV + +L K + +ACG + A+ G +Y WG G QLG+G D
Sbjct: 226 NSERNQPVARF--VEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHG---DK 280
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+N T PT + SL +K + I CG + A+ G +
Sbjct: 281 VNK------------------------TVPTRVESLVEKLVVQITCGWSHTVALTDTGEV 316
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
Y WG G+ +LG+ + P ++ L V+ VAS +H+V L P
Sbjct: 317 YTWGNGDHGKLGHNDTTKVTLPKLVD--VLEGKRVISVASYNEHTVALVDP 365
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 34/347 (9%)
Query: 27 VPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVG 77
+ + C +G VVLT G+GD G+LG G D + LVE+L N+ +V G
Sbjct: 36 IVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHG-DNGWKFVPRLVEELRGKNIRQVTCG 94
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
HT +T G +YTWG G LG E + F+ +T+ + Q++ G H+V L
Sbjct: 95 SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLK-GMQVRQVACGSRHTVVL 153
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
LE+ VY WG + G EG Q P +E + G IV+I++ H L+ G +
Sbjct: 154 LENKDVYTWGDKENGVSGHG-DTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEV 212
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGS 252
T G + G+LG ++R+ AR F+E L K + V G ++T ++ G
Sbjct: 213 FTFGEGKFGRLGHNSERNQPV-AR----FVE----ALAGKRVKQVACGGFHTAAVTETGE 263
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G + QLG D +V K+ P ++SL +K + G H++AL G++
Sbjct: 264 VYTWGGGEHGQLGHGD-KVNKT------VPTRVESLVEKLVVQITCGWSHTVALTDTGEV 316
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
Y +G D+G+LG N + VT P + L+ K + S+A N + A+
Sbjct: 317 YTWGNGDHGKLG-HNDTTKVTLPKLVDVLEGKRVISVASYNEHTVAL 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+Y++GR + G+LGL + S+ P PI +L ++ I IACG+
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQ-HRPVPIDALAERRIVQIACGS------------------ 43
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
G+ + +L EG++Y +GR D GRLG + P + L+ K I + CG
Sbjct: 44 -GHTV-------VLTDEGEVYTWGRGDDGRLGHGDNGWKFV-PRLVEELRGKNIRQVTCG 94
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ + A+ G LY WG G +LG+G E P +E L V QVA G +H+V+
Sbjct: 95 SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVE--TLKGMQVRQVACGSRHTVV 152
Query: 492 LAKPK 496
L + K
Sbjct: 153 LLENK 157
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 168/363 (46%), Gaps = 48/363 (13%)
Query: 38 VVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
VL G G+ GQLG+G + R AL D V VV G +++ + DG+++TWG
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAAL--DALAVSAVVAGSRNSLAICADGRLFTWG 69
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG------- 145
N G LG E +E P V+ VQ + G H +A+ + G YAWG
Sbjct: 70 WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129
Query: 146 ---SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
+ R G+ L+ + P + + ++A+G H V+LT G++ T G P
Sbjct: 130 GEEAERKEDGTRALRRD--IPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP- 186
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGL 258
G I Q S P++ + +++V +N ++ G + A+G
Sbjct: 187 -PGDIKQIS----------------TPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGN 229
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N Y QLG D++ + P ++ LSD +A+G HS AL EG++YA+GR
Sbjct: 230 NEYGQLGTGDTQPRSQ-------PIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRG 282
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
++GRLG + P + L + I ++CG S A+ +G ++ +G G+ +LG
Sbjct: 283 EHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY 342
Query: 379 GKE 381
G++
Sbjct: 343 GRK 345
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 60/420 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + ++ L AV + AG +S+A+ DG ++ WG
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWG--W 70
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + +P +++++G IV+ A G H + + +G G E GQ G
Sbjct: 71 NQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 130
Query: 206 RITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+R +R RR + + LK + + G ++ ++ G + +G
Sbjct: 131 EEAERKEDGTRALRRDIPIPQRCAPKLKVRQV--AAGGTHSVVLTQDGHVWTWGQP---- 184
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
++++ TP ++ L + K ++A G H+LAL +G ++A+G ++YG+L
Sbjct: 185 --WPPGDIKQ-----ISTPVRVQGLENVK--VIAVGAFHNLALTEDGILWAWGNNEYGQL 235
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P ++P + L D ++ IA G S A
Sbjct: 236 GTGD-TQPRSQPIRVEGLSDLSLVDIAAGGWHSTA------------------------- 269
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L EG++YA+GR ++GRLG + P + L + I ++CG S A+ +G
Sbjct: 270 -LTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGR 328
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIE----------GKQLNNYTVLQVASGGQHSVILA 493
++ +G G+ +LG G++ PM++ G + VA GG+H++ +A
Sbjct: 329 MFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 59/364 (16%)
Query: 140 TVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
V AWGS D MG + E + L++++ + + +G+ + + + + G L T G
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALA-VSAVVAGSRNSLAICADGRLFTWGW 70
Query: 199 PEQGQLG-----RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
++G LG + A +A G+S ++ G + + KG
Sbjct: 71 NQRGTLGHPPETKTESSPAPVDALAGVSIVQA------------AIGGWHCLAVDDKGRA 118
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFF--TPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
A+G N Y Q GE ++E ++ G P + K +A+G HS+ L +G
Sbjct: 119 YAWGGNEYGQCGE-EAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGH 177
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G+ + +K +S PV + L++ + IA G + A+ +G+L+ WG
Sbjct: 178 VWTWGQ-PWPPGDIKQISTPVR----VQGLEN--VKVIAVGAFHNLALTEDGILWAWG-- 228
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
++YG+LG + ++P ++P + L D ++ IA G
Sbjct: 229 ------------------------NNEYGQLGTGD-TQPRSQPIRVEGLSDLSLVDIAAG 263
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-LEPMKIEGKQLNNYTVLQVASGGQHSV 490
S A+ EG +Y WG G +LG G + + P K+E L ++QV+ GG HSV
Sbjct: 264 GWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVE--LLAGEDIIQVSCGGTHSV 321
Query: 491 ILAK 494
L +
Sbjct: 322 ALTR 325
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D VE L +++++V GG H+V LT DG+++++G
Sbjct: 274 GEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYG 333
Query: 95 CNDEGALG 102
D G LG
Sbjct: 334 RGDHGRLG 341
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 179/358 (50%), Gaps = 35/358 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERK----TFALVEDLDNVVEVVVGGMHTVCLTE-DGKVY 91
G+ L+ G+G+ GQLG G D ERK F L++ + V G ++V L++ +VY
Sbjct: 33 GIALSWGRGEDGQLGHG-DAEERKKPRAIFHLMQA--SCSAVCSGAEYSVALSQPRNEVY 89
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG D G LG + + FIPQ + + V+++ GD+H++A+ + G ++++G R+
Sbjct: 90 SWGWGDFGRLG-HGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFG--RN 146
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +GL P +ES+ G + IA G +H + TS G++ G G LG
Sbjct: 147 QNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLG-- 204
Query: 208 TQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLG 265
R+ P +V L+ + V G ++ + + G++ FG + Y QLG
Sbjct: 205 VGPPEDRHL--------PSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D Q P ++SL D + ++A G H+ A + GK+Y++G + +G+LG+
Sbjct: 257 HGDCIDQ-------LVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGI 309
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ P P+ L + ++CG +FA+ G ++ WG G QLG+ + D
Sbjct: 310 GSNTDS-NAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKD 366
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 156/349 (44%), Gaps = 48/349 (13%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ ++ G+ H + L S G L+ G E GQLG + R R + L +
Sbjct: 16 VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGH--GDAEERKKPRAI-------FHLMQA 66
Query: 234 HIDDVFTGV-YNTFISS-KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
V +G Y+ +S + + ++G ++ +LG D F P I++L+ +
Sbjct: 67 SCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCND-------VFIPQPIRALAGR 119
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A G H+LA+ G++++FGR+ G+LGL S+ + P P+ SL+ + +TSIAC
Sbjct: 120 NIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL-PQPVESLRGQEVTSIAC 178
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G S A S G ++ WG G LG G +D
Sbjct: 179 GGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAA 238
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
+ G +Y FG YG+LG + + + P + SL+D I IA G + A D G LY
Sbjct: 239 DETGAVYTFGWSKYGQLGHGDCIDQLV-PKAVESLKDSRIVLIAGGWRHTSAADDSGKLY 297
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
WG QLG G D P+ ++G LN V ++ G +H+ + +
Sbjct: 298 SWGWNKFGQLGIGSNTDSNAPVPVQG--LNTSPVKLLSCGWRHTFAVTE 344
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 50/379 (13%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIA 178
+ +S G SHS+ALL +G +WG R G +G +K P + + + +
Sbjct: 15 RVTSVSCGSSHSLALLSNGIALSWG--RGEDGQLGHGDAEERKKPRAIFHLMQASCSAVC 72
Query: 179 SGADHFVMLTS-RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
SGA++ V L+ R + + G + G+LG F+ L ++I
Sbjct: 73 SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDV---------FIPQPIRALAGRNIVK 123
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G +T ++ G + +FG N QLG + + P ++SL ++ T +
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTT-------SDAILPQPVESLRGQEVTSI 176
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A G HSLA S G ++A+G YG LG+ E P+ + L+ +TS+ACG S
Sbjct: 177 ACGGEHSLAATSAGDVFAWGWGRYGNLGV-GPPEDRHLPSQVHGLEGVKVTSVACGWRHS 235
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDIL--------------------------NSEGK 390
A D G +Y +G QLG+G D L + GK
Sbjct: 236 IAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGK 295
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+Y++G + +G+LG+ + ++ P P+ L + ++CG +FA+ G ++ WG G
Sbjct: 296 LYSWGWNKFGQLGIGSNTDS-NAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRG 354
Query: 451 NGYQLGNGKEDDILEPMKI 469
QLG+ + D P+++
Sbjct: 355 VNGQLGHNEPKDTNAPVRL 373
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V G G G LG+GP +R + V L+ V V G H++ E G VY
Sbjct: 187 TSAGDVFAWGWGRYGNLGVGPP-EDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVY 245
Query: 92 TWGCNDEGALGREAEGD--SEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
T+G + G LG GD + +P+ V K + V I+ G H+ A + G +Y+WG
Sbjct: 246 TFGWSKYGQLG---HGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWN 302
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ +G + P++ + S + ++ G H +T G++ + G GQLG
Sbjct: 303 KFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGH 361
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 101/240 (42%), Gaps = 20/240 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G + + G+ GQLGLG + VE L V + GG H++ T G V+
Sbjct: 135 TDTGELFSFGRNQNGQLGLG-TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVF 193
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG G LG D Q L K ++ G HS+A E G VY +G +
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSK-- 251
Query: 151 HGSMGLKGEGI-QKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G G+ I Q P +ES+ S IV IA G H G L + G + GQLG
Sbjct: 252 YGQLG-HGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLG-- 308
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ NA + L V L + G +TF ++ G + ++G QLG
Sbjct: 309 IGSNTDSNAPVPVQGLNTSPVKL-------LSCGWRHTFAVTEAGDVFSWGRGVNGQLGH 361
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 164/361 (45%), Gaps = 48/361 (13%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLK--LESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
++ WG + +G E I +P V IV++ G +H +++ G L + G
Sbjct: 1 MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGL 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFG 257
+ GQLG R+ + EP + L+ +I V G +T ++ G + A+G
Sbjct: 61 NDYGQLGHCRSRTRA----------EPVD-GLEAHNITQVACGAQHTLAQNEWGEVFAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N+ QLG E TP ++KSL+ K+ +A G+ HS+AL + G+IY +G
Sbjct: 110 SNSNGQLGLNVEESMMP------TPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGS 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL + P T+P + LQ I+ I+CG SFA+ G +YGWG + QLG
Sbjct: 164 NSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G D L +G ++ FG YG+LG S
Sbjct: 224 LGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLG-HCTSANE 282
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L T+T I CG C + A + S+G +Y +G+G QLG ++ P +
Sbjct: 283 MLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVI 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 188/385 (48%), Gaps = 33/385 (8%)
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
F LV+D +V+V G HT+ + +DGK++++G ND G LG + P
Sbjct: 30 FTLVDD---IVQVGCGENHTILVMKDGKLFSFGLNDYGQLG-HCRSRTRAEPVDGLEAHN 85
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSG--IVKIA 178
Q++ G H++A E G V+AWGS +S+G +GL E + TP ++S++ +V+IA
Sbjct: 86 ITQVACGAQHTLAQNEWGEVFAWGS--NSNGQLGLNVEESMMPTPKMVKSLATKQVVQIA 143
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G H + LT+ G + G GQLG S + + + L G +P I +
Sbjct: 144 CGRSHSMALTNVGEIYCWGSNSHGQLG--LGSSGTPETKPCLVKLLQG-IP-----ISHI 195
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +F ++ G++ +G N++ QLG D+ + P +KSL ++ T +
Sbjct: 196 SCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQ-------PTQLKSLRFQRVTYIR 248
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G H+ AL +G ++ FG YG+LG S P + L T+T I CG C +
Sbjct: 249 CGMDHTAALTRDGGVFTFGAGMYGQLG-HCTSANEMLPRKVLELMGTTVTQICCGRCHTL 307
Query: 358 A-IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT- 415
A + S+G +Y +G+G QLG ++ + + I G + +K+V + TE
Sbjct: 308 AFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVI---GPWETSNNSIKDVKDLATETAE 364
Query: 416 PIPSLQDK--TITSIACGNCVSFAI 438
+ ++Q K + +I CG SF++
Sbjct: 365 ALSAIQSKRVVVRNIFCGGDQSFSL 389
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 41/254 (16%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + G + +FGLN+Y QLG S + + L T +A G H
Sbjct: 45 HTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP---------VDGLEAHNITQVACGAQH 95
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGNCVSFAID 360
+LA N G+++A+G + G+LGL NV E + PTP + SL K + IACG S A
Sbjct: 96 TLAQNEWGEVFAWGSNSNGQLGL-NVEESMM-PTPKMVKSLATKQVVQIACGRSHSMA-- 151
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
L + G+IY +G + +G+LGL + P T+P + L
Sbjct: 152 ------------------------LTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL 187
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
Q I+ I+CG SFA+ G +YGWG + QLG G D +P ++ K L V
Sbjct: 188 QGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQL--KSLRFQRVT 245
Query: 481 QVASGGQHSVILAK 494
+ G H+ L +
Sbjct: 246 YIRCGMDHTAALTR 259
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 105/237 (44%), Gaps = 19/237 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGL + T +V+ L VV++ G H++ LT G++Y WG
Sbjct: 103 GEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWG 162
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G LG + G E P V L + IS G S A+ G VY WG ++S G
Sbjct: 163 SNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWG--KNSFG 220
Query: 153 SMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL + P +L+S+ + I G DH LT G + T G GQLG T
Sbjct: 221 QLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCT-- 278
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLG 265
S N LE L + + G +T F+ SKG I AFGL QLG
Sbjct: 279 --SANEMLPRKVLE-----LMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLG 328
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V G+ GQLGLG D +R ++ L V + G HT LT DG V+
Sbjct: 206 TPSGAVYGWGKNSFGQLGLG-DTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVF 264
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV--NLPKKAVQISAGDSHSVALL-EDGTVYAWG 145
T+G G LG + E +P+ V + QI G H++A + G +YA+G
Sbjct: 265 TFGAGMYGQLGHCTSAN-EMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFG 320
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 169/363 (46%), Gaps = 44/363 (12%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WG+ +HG +GL G E P K++ +V++ G H + LT G +
Sbjct: 3 IYCWGN--TAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYAC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG N R MS + L+ I + G ++ +++ G + +
Sbjct: 61 GNNDHGQLGH--DLDTLPNKRPRMSRFK-RLTSLENYIITCISCGTAHSLALTNWGQVFS 117
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG D+E + TP +IK++ K +ASGQ+H LAL + G++YA+
Sbjct: 118 WGSNAVGQLGH-DAENGRQP-----TPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAW 171
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G + YG+LG+ SE V PT I SL I IACG SFA+ G ++GWG Q
Sbjct: 172 GSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQ 231
Query: 376 LG----NGK-------------------EDD---ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG N + DD L +EG ++ G +G+LG + S
Sbjct: 232 LGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSN 291
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L IT IACG + A + S G +YG+G+G QLG G + P
Sbjct: 292 EIV-PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQI 350
Query: 469 IEG 471
+ G
Sbjct: 351 VRG 353
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 51/342 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERK--- 60
+Q P + + ++ V ++C T + LT CG D GQLG D + K
Sbjct: 22 EQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPR 81
Query: 61 --TFALVEDLDNVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
F + L+N + + G H++ LT G+V++WG N G LG +AE + P+ +
Sbjct: 82 MSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMI 141
Query: 117 NL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK--LESVS 172
K VQI++G H +AL +G +YAWGS +S+G +G+ G +K P+ ++S++
Sbjct: 142 KAIGAKHVVQIASGQYHCLALTNNGELYAWGS--NSYGQLGI-GTTSEKVPMPTLIQSLA 198
Query: 173 G--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLE 224
G I IA G +H ++ G + G GQLG + R R G+ ++
Sbjct: 199 GVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYIS 258
Query: 225 PGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
G DD ++ F++++G + G + QLG + P
Sbjct: 259 CG---------DD-----FSVFLTNEGGVFTCGAGTFGQLGHGSCSNE-------IVPRK 297
Query: 285 IKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGL 325
+ L K T +A G+ H+LA S GKIY FG G+LG+
Sbjct: 298 VFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGI 339
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 163/356 (45%), Gaps = 33/356 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
+ G G+LGLG E+ D D VV V G HT+ LT++GK+Y G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKA-------VQISAGDSHSVALLEDGTVYAWGSFR 148
ND G LG + + P+ + IS G +HS+AL G V++WGS
Sbjct: 63 NDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS-- 120
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
++ G +G E G Q TP ++++ +V+IASG H + LT+ G L G GQLG
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
T S VP I + G ++F +S G+I +G N + QL
Sbjct: 181 IGT---TSEKVPMPTLIQSLAGVP-----IAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 232
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + C+ P +++L ++ G S+ L +EG ++ G +G+LG
Sbjct: 233 GLND-----LNSRCY--PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG 285
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L IT IACG + A + S G +YG+G+G QLG G
Sbjct: 286 HGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP---DVMERKTFALVEDLDNVVEVVVGGMHTVCLT-EDGK 89
T G V TCG G GQLG G +++ RK F L+ + ++ G HT+ GK
Sbjct: 268 TNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMG--SKITQIACGRRHTLAFVPSRGK 325
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
+Y +G G LG G+ PQ V P + D ++
Sbjct: 326 IYGFGLGGVGQLGIGMVGNHS-TPQIVRGPWFKTDFKSSDCDETQII 371
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 161/321 (50%), Gaps = 36/321 (11%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISA 127
NV +V G HTV + +DG VYT GCND G LG + S P V + V +S
Sbjct: 19 NVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK---SRKKPDQVGALDAQTIVAVSC 75
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSG--IVKIASGADHF 184
G++H++AL + G V++WG +HG +GL E + P ++S+ IV++A G H
Sbjct: 76 GEAHTLALNDKGQVFSWG--HAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHS 133
Query: 185 VMLTSRGNLLTAGCPEQGQLG---RITQRSASRNARR--GMSFLEPGEVPLKRKHIDDVF 239
+ L+ ++ + G + GQLG I + SA R+ + G+ F HI
Sbjct: 134 LALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPF----------AHI--AA 181
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G ++ ++ G+I +G N + QLG D E +S P L+KSL +K + G
Sbjct: 182 GGGHSFALTMSGAIFGWGRNKFGQLGLND-ETDRSA------PALLKSLRSQKIIHICCG 234
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA- 358
+ H+ AL EG ++ FG YG+LG + + V P + L +T IACG + A
Sbjct: 235 EDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAF 293
Query: 359 IDSEGVLYGWGMGNGYQLGNG 379
+ S G +Y +G+G QLG G
Sbjct: 294 VPSSGRIYSFGLGGNGQLGTG 314
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 153/355 (43%), Gaps = 61/355 (17%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHI 235
+ G+ H V + G + T GC + GQLG R +P +V L + I
Sbjct: 23 VGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK------------KPDQVGALDAQTI 70
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V G +T ++ KG + ++G + Q+G + +E P IKSL D +
Sbjct: 71 VAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAE------DYIRVPRNIKSLYDIQIV 124
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+A G HHSLAL+ E IY++G++ YG+LGL + + + P I SL IA G
Sbjct: 125 QVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGG 184
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSE 388
SFA+ G ++GWG QLG E D L E
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE 244
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGW 447
G ++ FG YG+LG + + V P + L +T IACG + A + S G +Y +
Sbjct: 245 GGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSF 303
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNN-------------YTVLQVASGGQHS 489
G+G QLG G + P ++G L + Y V ++ SGG S
Sbjct: 304 GLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANGCYCVKRIYSGGDQS 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 141/300 (47%), Gaps = 36/300 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD +V V G HT+ L + G+V++WG
Sbjct: 37 GTVYTCGCNDLGQLGHDK---SRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWG 93
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G +G D +P+ + + VQ++ G HS+AL ++ +Y+WG ++ +G
Sbjct: 94 HAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWG--QNQYG 151
Query: 153 SMGLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG--R 206
+GL G I+K P ++S++GI IA+G H LT G + G + GQLG
Sbjct: 152 QLGL-GSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLND 210
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLG 265
T RSA + L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 211 ETDRSAPALLKS-----------LRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 259
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+LA S G+IY+FG G+LG
Sbjct: 260 HNSTNHE-------VNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 39/254 (15%)
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D EV C F +K + G H++ + +G +Y G +D G+LG
Sbjct: 2 DEEVVLEPRRCDF-------FINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK 54
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--- 384
+ +P + +L +TI +++CG + A++ +G ++ WG Q+G +D
Sbjct: 55 SRK---KPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRV 111
Query: 385 ------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
L+ E IY++G++ YG+LGL + + + P I SL
Sbjct: 112 PRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL 171
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
IA G SFA+ G ++GWG QLG E D P + K L + ++
Sbjct: 172 AGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALL--KSLRSQKII 229
Query: 481 QVASGGQHSVILAK 494
+ G H+ L K
Sbjct: 230 HICCGEDHTAALTK 243
>gi|116193011|ref|XP_001222318.1| hypothetical protein CHGG_06223 [Chaetomium globosum CBS 148.51]
gi|88182136|gb|EAQ89604.1| hypothetical protein CHGG_06223 [Chaetomium globosum CBS 148.51]
Length = 518
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 183/427 (42%), Gaps = 67/427 (15%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCK-TGGGVVLTCGQGDTGQLGLGPDV----MERKTFAL 64
R Q Q+ ++ +P L + T +V G G+LGLGP V + R
Sbjct: 66 RSQTAAAGQRA---TQTLPVLSQRPTRSLIVYVFGANSGGELGLGPSVKSGNIGRPRVNP 122
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI------------ 112
VV++ +G MH V LT+D ++ TWG ND GALGR+ + + +
Sbjct: 123 YLSESGVVQISLGAMHGVALTQDNRILTWGVNDHGALGRDTAWEEKLVDADGDDSDSDDG 182
Query: 113 ---------PQTVN---LPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
P V+ LP V Q++A D+ + AL G VY WGSFR G +
Sbjct: 183 GDLNPKESTPTPVDMGALPPDTVFTQVAATDNATFALTSTGLVYGWGSFRSEDGKLSFTP 242
Query: 159 E-GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+Q P + SV ++K+ G++H + LT+ G + T G GQLGR R +
Sbjct: 243 TVEVQSRPALIPSVKDVIKLCCGSNHVLALTADGFVYTWGRGTDGQLGR-------RFSS 295
Query: 218 RGMSFLEPGEVPLK---RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG----EADS 269
R + + + G VP K + I D+ +G ++F I G + +G NN Q+G D
Sbjct: 296 RIVDWSKAGLVPHKVAELRDIVDIGSGSNHSFAIERSGLVYGWGFNNAGQVGALDKAGDH 355
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFT-MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E P L+K L T + G H+LA+ +G+ ++GR GLK
Sbjct: 356 ESAHEHTIVISVPTLVKGLVGLPRTKQVTGGNFHTLAVTEDGRCLSWGRLYSCATGLKVD 415
Query: 329 SEPVTE-------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
+ P PT IP L +A + S A+ ++ +Y WG+ Q
Sbjct: 416 TLPPQSVVRDSRGPSFLGVPTTIPGLP---AAFVAAASEHSLAVTTDQNVYTWGLNLTKQ 472
Query: 376 LGNGKED 382
+ E+
Sbjct: 473 IAQKGEE 479
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
D FT +A+ + + AL S G +Y +G R + G+L E + P IPS++D +
Sbjct: 203 DTVFTQVAATDNATFALTSTGLVYGWGSFRSEDGKLSFTPTVEVQSRPALIPSVKD--VI 260
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+ CG+ A+ ++G +Y WG G QLG I+ D+ + GL
Sbjct: 261 KLCCGSNHVLALTADGFVYTWGRGTDGQLGRRFSSRIV------------DWSKAGLV-- 306
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
P + L+D I I G+ SFAI+ G++YGWG N Q+G
Sbjct: 307 ------PHKVAELRD--IVDIGSGSNHSFAIERSGLVYGWGFNNAGQVG 347
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ P+ V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 ANTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + +R S +PL + V G ++ +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQV----VAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +++
Sbjct: 228 KDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
+ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 281 DEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 59/366 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ ++A G +H V L G + T G +GQLG +R ++ + G L +
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPEQIG---------ALADQ 84
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
HI V G ++ +S +G + ++G + QLG +E + P LI+ L+ +
Sbjct: 85 HIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA------VPRLIQKLNQQT 138
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
++ G H LAL ++G+ + +GR+ +G+LGL P + SL+ + + G
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAG 198
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
SFA+ G ++GWGM N QLG E D +L
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLY 445
G ++ FG G+LG ++++ V P + L +T IACG + A + S G++Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEG-------------KQLNNYTVLQVASGGQHSVIL 492
+G G QLG G ++ P ++G + + V Q+ SGG + +L
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377
Query: 493 AKPKPN 498
N
Sbjct: 378 CSKYEN 383
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG R+SHG +GL E Q +P ++ S+ GI ++ +G H
Sbjct: 147 WHCLALAADGQFFTWG--RNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 312 IYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G G+ G+ N+ V EP + D+++ +ACG S + +G +Y G
Sbjct: 1 MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGA 60
Query: 371 GNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKN 406
QLG+ +E + L+ +G+++++G G+LGL
Sbjct: 61 NTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+ V P I L +TI ++CGN A+ ++G + WG + QLG GKE
Sbjct: 121 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ + L + QV +GG HS L+
Sbjct: 181 PQRV--RSLEGIPLAQVVAGGAHSFALS 206
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 157/357 (43%), Gaps = 50/357 (14%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVA 134
G +H+ + DG +YTWG N G LGR+ + P P V +SAG SVA
Sbjct: 716 GDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVA 775
Query: 135 LLEDGTVYAWGSFRDSHGSMG--LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSR 190
L DG++Y+WG +S G +G + P K+E+ +GI V+ ++G H V L+S
Sbjct: 776 LASDGSLYSWGD--NSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSD 833
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV-FTGV-----YN 244
GN+ T G GQLGR + P + P K DV FT V +
Sbjct: 834 GNIYTWGDNSAGQLGRTVTSN------------NPADKPGKADTPADVTFTSVSAGQGHT 881
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ ++G + +G N + +LG + + TP I FT ++G+ HS+
Sbjct: 882 VAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGI------TFTQASAGESHSV 935
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
A++ +G IY +G GRLG P +P + T T + G S A+ S+G
Sbjct: 936 AVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGS 995
Query: 365 LYGWGMGNGYQLGNGKEDDI------------------LNSEGKIYAFGRHDYGRLG 403
LY WG G + D L S+G +Y++G + G+LG
Sbjct: 996 LYTWGDSGKTSAGRPNKVDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLG 1052
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 161/384 (41%), Gaps = 58/384 (15%)
Query: 114 QTVNL---PKKAVQIS---AGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPL 166
QTV L P + ++IS GD HS A+ DG++Y WG +SHG +G + P
Sbjct: 696 QTVTLTPPPARGIRISQADGGDLHSAAVGSDGSLYTWGD--NSHGQLGRDTADKPDSHPS 753
Query: 167 KLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
K E+ +G+ V +++G V L S G+L + G +GQLGR + N +
Sbjct: 754 KAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKV---- 809
Query: 225 PGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
E P + G + +SS G+I +G N+ QLG + N P
Sbjct: 810 --EAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRT-----VTSNNPADKPGK 862
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
+ +D FT +++GQ H++A++++G +Y +G + +G LG S P +P +
Sbjct: 863 ADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGI 922
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------------------- 378
T T + G S A+ +G +Y WG +LG
Sbjct: 923 TFTQASAGESHSVAVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASA 982
Query: 379 -GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
GK L S+G +Y +G G N V P I T T + G A
Sbjct: 983 GGKHSIALGSDGSLYTWGDSGKTSAGRPNK---VDTPAGI------TFTQASAGASYCLA 1033
Query: 438 IDSEGVLYGWGMGNGYQLGNGKED 461
+ S+G LY WG QLG D
Sbjct: 1034 LGSDGNLYSWGDNAKGQLGRDTGD 1057
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 167/358 (46%), Gaps = 43/358 (12%)
Query: 52 LGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS 109
LG E++T +LV V +V G H + + DG +Y+WG N +G LGRE +
Sbjct: 199 LGTPEDEKRTPSLVNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTT 258
Query: 110 -EFIPQTVNLPK--------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK-GE 159
+ PQ N PK Q AG HS+AL DG +Y+WG + +G +G G
Sbjct: 259 PKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGSDGNLYSWG--ENKYGELGRDTGS 316
Query: 160 GIQKT-PLKLESVSGIVKI---ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
I P K+ GI KI ++G + + L S G+L + G +LGR R+
Sbjct: 317 AIYDVKPGKVNLPKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRD 376
Query: 216 -ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
+ R M+ +P K + G + + SS GS+ ++G N Y QLG + ++
Sbjct: 377 RSPRKMT------MPAGVKKFTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQ 430
Query: 274 SGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS--- 329
TP + + KFT +++ HSLAL S+G +Y++G +D +LG S
Sbjct: 431 D-----RTPRKVTMPAGVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKY 485
Query: 330 --EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKED 382
+P PTP Q T ++ G S AI S+G LY WG +LG +GK D
Sbjct: 486 DVKPGKVPTPAGVAQ---FTEVSAGYSHSLAIGSDGNLYSWGQNKYGELGRPTSGKYD 540
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 183/406 (45%), Gaps = 74/406 (18%)
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGT 140
+ DG +Y WG N+ LG D + P VN P Q+S G +H +A+ DG
Sbjct: 182 AIASDGNLYRWGDNNY-KLGTPE--DEKRTPSLVNPPTGVHFTQVSTGYTHFLAIGSDGN 238
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS------------GADHFVMLT 188
+Y+WG+ D G +G E + TP + K+ + G H + L
Sbjct: 239 LYSWGNNAD--GELGR--ETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALG 294
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGV-YNT 245
S GNL + G + G+LGR T + + ++PG+V L + I + G Y+
Sbjct: 295 SDGNLYSWGENKYGELGRDTGSA--------IYDVKPGKVNLPKGITKITQISAGTFYSM 346
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF--FTPH-LIKSLSDKKFTMLASGQHH 302
+ S G + ++G N Y +LG + +G F +P + KKFT + +G+
Sbjct: 347 ALDSDGDLYSWGDNTYDELG------RYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWT 400
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP----IPSLQDKTITSIACGNCVSFA 358
SLA +S+G +Y++G ++YG+LG +N + + TP +P+ K T ++ + S A
Sbjct: 401 SLATSSDGSLYSWGWNEYGQLG-RNTAPARQDRTPRKVTMPAGVTK-FTKVSAEHRHSLA 458
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+ S+G LY WG+ + QLG D G K +P PTP
Sbjct: 459 LGSDGNLYSWGLNDCKQLG-------------------RDTGS--AKYDVKPGKVPTPAG 497
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---NGKED 461
Q T ++ G S AI S+G LY WG +LG +GK D
Sbjct: 498 VAQ---FTEVSAGYSHSLAIGSDGNLYSWGQNKYGELGRPTSGKYD 540
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 151/365 (41%), Gaps = 37/365 (10%)
Query: 37 GVVLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G + T G GQLG PD K A V V G +V L DG +Y+
Sbjct: 727 GSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGV--TFVHVSAGYGFSVALASDGSLYS 784
Query: 93 WGCNDEGALGREAEGDSEF-IPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG N G LGR ++ P V P VQ SAG SH VAL DG +Y WG +
Sbjct: 785 WGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGD--N 842
Query: 150 SHGSMG--LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
S G +G + P K ++ + + +++G H V + ++G++ T G G+LG
Sbjct: 843 SAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELG 902
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
R T + + + + P + + + ++ +S GSI +G +LG
Sbjct: 903 RSTTSTPADKPGKADT---PAGITFTQASAGE----SHSVAVSDDGSIYTWGDTANGRLG 955
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D+ + T P + + FT ++G HS+AL S+G +Y +G G
Sbjct: 956 R-DTNI-----TPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSAGR 1009
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
N V P I T T + G A+ S+G LY WG QLG D
Sbjct: 1010 PNK---VDTPAGI------TFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRDTGDTWS 1060
Query: 386 NSEGK 390
S K
Sbjct: 1061 ASPAK 1065
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 182/467 (38%), Gaps = 75/467 (16%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGD 129
EV G H++ + DG +Y+WG N G LGR G + P V P+ K V +S
Sbjct: 502 TEVSAGYSHSLAIGSDGNLYSWGQNKYGELGRPTSGKYDSSPGMVAFPEDPKPVDVSFSG 561
Query: 130 SHSVAL--LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
+ L DGT D HG ++++V D +
Sbjct: 562 TPGTNLDPNSDGTWSVTTPPHD-HG--------------RVDTVITWRMNGERPDAHLSY 606
Query: 188 TSRGNLLTAGCPEQGQ---LGRITQRSASRNARRGMSFLEPGEVPLKRKHI-DDVFTG-- 241
GN L P+ G +T+ G P + P K KH+ D F G
Sbjct: 607 RYLGNYLIVFDPDGGTGFGFQIVTE---------GNRLKPPAKDPTKDKHLFDGWFIGDT 657
Query: 242 --VYNTFISSKGSILAFGLNNYSQLGEADSE--VQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++ ++ K ++ A + S + D + + G T TP + + + +
Sbjct: 658 AYDFSRPVTDKVTLTAHWSSAESNRWKLDKDNGPESGGQTVTLTPPPARGI---RISQAD 714
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G HS A+ S+G +Y +G + +G+LG +P + P+ + T ++ G S
Sbjct: 715 GGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSV 774
Query: 358 AIDSEGVLYGWGMGNGYQLGN----------------------------GKEDDILNSEG 389
A+ S+G LY WG + QLG G L+S+G
Sbjct: 775 ALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDG 834
Query: 390 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
IY +G + G+LG S P +P + D T TS++ G + A+D++G +Y WG
Sbjct: 835 NIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWG 894
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLN--NYTVLQVASGGQHSVILA 493
+LG P GK T Q ++G HSV ++
Sbjct: 895 DNTHGELGRSTTS---TPADKPGKADTPAGITFTQASAGESHSVAVS 938
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 51/303 (16%)
Query: 234 HIDDVFTGVYNTF--ISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSD 290
H V TG Y F I S G++ ++G N +LG E S K P L+ +
Sbjct: 219 HFTQVSTG-YTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAG 277
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP----IPSLQDKTI 346
FT +G+ HSLAL S+G +Y++G + YG LG ++ + + P +P K I
Sbjct: 278 VHFTQACAGKWHSLALGSDGNLYSWGENKYGELG-RDTGSAIYDVKPGKVNLPKGITK-I 335
Query: 347 TSIACGNCVSFAIDSEGVLYGWG---------MGNGYQLGNGKEDDIL------------ 385
T I+ G S A+DS+G LY WG GY + +
Sbjct: 336 TQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIK 395
Query: 386 ---------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP----IPSLQDKTITSIACGN 432
+S+G +Y++G ++YG+LG +N + + TP +P+ K T ++ +
Sbjct: 396 AGEWTSLATSSDGSLYSWGWNEYGQLG-RNTAPARQDRTPRKVTMPAGVTK-FTKVSAEH 453
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLG--NGKEDDILEPMKIEGKQ-LNNYTVLQVASGGQHS 489
S A+ S+G LY WG+ + QLG G ++P K+ + +T +V++G HS
Sbjct: 454 RHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQFT--EVSAGYSHS 511
Query: 490 VIL 492
+ +
Sbjct: 512 LAI 514
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 175/356 (49%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + NV +V G HTV + +DG VYT G
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFIN-KNVRDVGCGSRHTVFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CND G LG + S P+ V + V +S G++H++AL + G V++WG +G
Sbjct: 60 CNDLGQLGHDK---SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG--HAVYG 114
Query: 153 SMGLK-GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---R 206
+GL E + P ++S+S IV++A G H + L+ ++ + G + GQLG
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLE 174
Query: 207 ITQRSASRNAR--RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
I + A R+ + G+ F HI G ++ ++ G+I +G N + QL
Sbjct: 175 IKKECAPRHIKSLSGIPF----------AHI--AAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D E ++ P L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLTD-ETDRN------VPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
+ + V P + L +T IACG + A + S G +Y +G+G QLG G
Sbjct: 276 HNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 166/393 (42%), Gaps = 67/393 (17%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E + P + + + + G+ H V + G + T GC
Sbjct: 3 CWGN--TSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+ GQLG R +P +V L + I V G +T ++ KG + ++
Sbjct: 61 NDLGQLGHDKSRR------------KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSW 108
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G Y Q+G + +E P IKSLSD + +A G HHSLAL+ + I+++G
Sbjct: 109 GHAVYGQIGLSTAE------EYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG 162
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ YG+LGL + P I SL IA G SFA+ G ++GWG QL
Sbjct: 163 QNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D L EG ++ FG YG+LG + +
Sbjct: 223 GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G +Y +G+G QLG G + P +
Sbjct: 283 VN-PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTV 341
Query: 470 EGKQLNN-------------YTVLQVASGGQHS 489
+G L Y + ++ SGG S
Sbjct: 342 KGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQS 374
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V TCG D GQ LG D RK + D +V V G HT+ L + G+V++WG
Sbjct: 53 GTVYTCGCNDLGQ--LGHDKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110
Query: 96 NDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G +G + +P+ + + VQ++ G HS+AL +D +++WG ++ +G
Sbjct: 111 AVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG--QNQYGQ 168
Query: 154 MGLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G I+K P ++S+SGI IA+G H LT G + G + GQLG +
Sbjct: 169 LGL-GLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE 227
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
RN + L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 228 --TDRNVPALLK-------SLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+LA S G+IY+FG G+LG
Sbjct: 279 TNHE-------VNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP +K + + CG+ + + +G +Y G
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ QLG HD R +P + +L + I +++C
Sbjct: 61 NDLGQLG-------------------HDKSR----------RKPEQVGALDAQIIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG Q+G + E+ I P I K L++ ++QVA G HS
Sbjct: 92 GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNI--KSLSDVQIVQVACGHHHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ P+ V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD--G 114
Query: 153 SMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + +R S +PL + V G ++ +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQV----VAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +++
Sbjct: 228 KDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
+ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 281 DEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 168/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDQGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG E + P LI+ L+ + ++ G H LAL ++G+ + +GR+
Sbjct: 112 SDGQLGLMTIEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + + G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG R+SHG +GL E Q +P ++ S+ GI ++ +G H
Sbjct: 147 WHCLALAADGQFFTWG--RNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 175/356 (49%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + + NV +V G HTV + +DG VYT G
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFIN-KNVRDVGCGSRHTVFVLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CND G LG + S P+ V + V +S G++H++AL + G V++WG +G
Sbjct: 60 CNDLGQLGHDK---SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG--HAVYG 114
Query: 153 SMGLK-GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---R 206
+GL E + P ++S+S IV++A G H + L+ ++ + G + GQLG
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLE 174
Query: 207 ITQRSASRNAR--RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
I + A R+ + G+ F HI G ++ ++ G+I +G N + QL
Sbjct: 175 IKKECAPRHIKSLSGIPF----------AHI--AAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D E ++ P L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLTD-ETDRN------VPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
+ + V P + L +T IACG + A + S G +Y +G+G QLG G
Sbjct: 276 HNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 166/393 (42%), Gaps = 67/393 (17%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E + P + + + + G+ H V + G + T GC
Sbjct: 3 CWGN--TSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+ GQLG R +P +V L + I V G +T ++ KG + ++
Sbjct: 61 NDLGQLGHDKSRR------------KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSW 108
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G Y Q+G + +E P IKSLSD + +A G HHSLAL+ + I+++G
Sbjct: 109 GHAVYGQIGLSTAE------EYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG 162
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ YG+LGL + P I SL IA G SFA+ G ++GWG QL
Sbjct: 163 QNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D L EG ++ FG YG+LG + +
Sbjct: 223 GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G +Y +G+G QLG G + P +
Sbjct: 283 VN-PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTV 341
Query: 470 EGKQLNN-------------YTVLQVASGGQHS 489
+G L Y + ++ SGG S
Sbjct: 342 KGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQS 374
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 30/297 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V TCG D GQ LG D RK + D +V V G HT+ L + G+V++WG
Sbjct: 53 GTVYTCGCNDLGQ--LGHDKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110
Query: 96 NDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G +G + +P+ + + VQ++ G HS+AL +D +++WG ++ +G
Sbjct: 111 AVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG--QNQYGQ 168
Query: 154 MGLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G I+K P ++S+SGI IA+G H LT G + G + GQLG +
Sbjct: 169 LGL-GLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE 227
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
RN + L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 228 --TDRNVPALLK-------SLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ + P + L T +A G+ H+LA S G+IY+FG G+LG
Sbjct: 279 TNHE-------VNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP +K + + CG+ + + +G +Y G
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ QLG HD R +P + +L + I +++C
Sbjct: 61 NDLGQLG-------------------HDKSR----------RKPEQVGALDAQIIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG Q+G + E+ I P I K L++ ++QVA G HS
Sbjct: 92 GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNI--KSLSDVQIVQVACGHHHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|354475661|ref|XP_003500046.1| PREDICTED: regulator of chromosome condensation-like, partial
[Cricetulus griseus]
Length = 225
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 17/196 (8%)
Query: 197 GCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-IS 248
GC EQGQLGR+ + A+++ R+G+ L P V LK R D F G Y TF IS
Sbjct: 1 GCGEQGQLGRVPELFANQSVRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYFTFAIS 60
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM-LASGQHHSLALN 307
+G + FGL+NY QLG D+ +CF +L + KF + ++GQ H++ ++
Sbjct: 61 HEGHMYGFGLSNYHQLGTPDTA------SCFIPQNLTSFKNSTKFCVGFSTGQQHTICVD 114
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
SEG Y+ R +YGRLGL E + PT I L ++S+ACG V ++ +G ++
Sbjct: 115 SEGNAYSLARAEYGRLGLGEGVEEKSIPTLISWL--PVVSSVACGASVGCSVSKDGCVFA 172
Query: 368 WGMGNGYQLGNGKEDD 383
WGMG YQLG G+++D
Sbjct: 173 WGMGTNYQLGTGQDED 188
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HT+C+ +G Y+ + G LG + + IP ++ ++ G S ++
Sbjct: 106 GQQHTICVDSEGNAYSLARAEYGRLGLGEGVEEKSIPTLISWLPVVSSVACGASVGCSVS 165
Query: 137 EDGTVYAWG---SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
+DG V+AWG +++ G ++ T KLE+ ++ ++SG H V+L
Sbjct: 166 KDGCVFAWGMGTNYQLGTGQDEDDWSPVEMTGKKLENRV-VLTVSSGGQHTVLL 218
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + + + G+LGLG V E+ L+ L V V G +++DG V+
Sbjct: 112 CVDSEGNAYSLARAEYGRLGLGEGVEEKSIPTLISWLPVVSSVACGASVGCSVSKDGCVF 171
Query: 92 TWGCNDEGALGR-EAEGDSEFIPQT-VNLPKKAV-QISAGDSHSVALLED 138
WG LG + E D + T L + V +S+G H+V L++D
Sbjct: 172 AWGMGTNYQLGTGQDEDDWSPVEMTGKKLENRVVLTVSSGGQHTVLLVKD 221
>gi|169848433|ref|XP_001830924.1| RCC1 domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|116508093|gb|EAU90988.1| RCC1 domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 549
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 187/423 (44%), Gaps = 70/423 (16%)
Query: 28 PTLKCKTGGG-VVLTCGQGDTGQLGLGPDV----------------MERKTFALVEDLDN 70
PTL T +V G D+GQLGLG + + TF E
Sbjct: 104 PTLPAPTRPSPLVWVWGATDSGQLGLGENYNSEVPKPRRHPWAEQQISEGTFG-SEPGAG 162
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-----AEGDSEFIPQTVNLPK----- 120
++ V GG+HT L E G++++ G NDEGALGRE E ++ Q L +
Sbjct: 163 ILSVTSGGLHTYLLDEKGRIWSAGTNDEGALGRETKKEPTENEAHLRAQEFVLIQTLADE 222
Query: 121 --KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKL--------- 168
+AVQ++ GD+ AL + G + WG+FRD G + G Q P +
Sbjct: 223 GFRAVQLATGDNFGAALNDQGDLKVWGTFRDDEGKSNFSSDVGKQLAPTSITIHGLYTPK 282
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
S I IA G +H V LT++G + + G GQLGR R SR+ ++ P V
Sbjct: 283 SSSDKIASIAGGENHLVALTTQGEVYSWGIGGSGQLGR---RVLSRHKNEALA---PKRV 336
Query: 229 PLKRKHIDDVF--TGVYNTF-ISSKGSILAFGLNNYSQL--GEADSEVQKSGNTCFFTPH 283
L + V G+ +TF + G + +GLN+ QL GE V + +P
Sbjct: 337 VLGSRSRKAVLIGAGLRSTFAVDQAGEVWGWGLNSVGQLGIGERGEIVLQPTKLEVLSPS 396
Query: 284 LIKSLSD---KKFTMLASGQHHSLALNSEGKIYAFGR-HDY--------------GRLGL 325
+ S + + + G+ H++ ++GK+YA G +DY G G
Sbjct: 397 NLPSSVEGEQDRVVQIRGGEFHTVFRTAQGKVYACGACNDYQLGLPEDHEVFEGKGTRGA 456
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ ++EPV P P +++D + I+ G S A+ +G L WG+G +LG G E + +
Sbjct: 457 ECITEPVLVPLP-DAVKDDPVVWISAGPRYSMAVTQDGALLSWGVGEQSELGLGDETEAV 515
Query: 386 NSE 388
+
Sbjct: 516 TPQ 518
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 202/481 (41%), Gaps = 124/481 (25%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
V+ WG D G LG +SE +P+ P QIS G
Sbjct: 116 VWVWGATDSGQLGLGENYNSE-VPKPRRHPWAEQQISEG--------------------- 153
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+ GS E +GI+ + SG H +L +G + +AG ++G LGR T+
Sbjct: 154 TFGS---------------EPGAGILSVTSGGLHTYLLDEKGRIWSAGTNDEGALGRETK 198
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-------YNTFISSKGSILAFGL---- 258
+ + N + L E L + D+ F V + ++ +G + +G
Sbjct: 199 KEPTENE----AHLRAQEFVLIQTLADEGFRAVQLATGDNFGAALNDQGDLKVWGTFRDD 254
Query: 259 ---NNYSQLGEADSEVQKSGNTCFFTPHLI---KSLSDKKFTMLASGQHHSLALNSEGKI 312
+N+S S+V K T H + KS SDK +A G++H +AL ++G++
Sbjct: 255 EGKSNFS------SDVGKQLAPTSITIHGLYTPKSSSDK-IASIAGGENHLVALTTQGEV 307
Query: 313 YAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
Y++G G+LG + +S E + + + + I G +FA+D G ++GW
Sbjct: 308 YSWGIGGSGQLGRRVLSRHKNEALAPKRVVLGSRSRKAVLIGAGLRSTFAVDQAGEVWGW 367
Query: 369 GMGNGYQLGNGKEDDIL--------------------------------------NSEGK 390
G+ + QLG G+ +I+ ++GK
Sbjct: 368 GLNSVGQLGIGERGEIVLQPTKLEVLSPSNLPSSVEGEQDRVVQIRGGEFHTVFRTAQGK 427
Query: 391 IYAFGR-HDY--------------GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
+YA G +DY G G + ++EPV P P +++D + I+ G S
Sbjct: 428 VYACGACNDYQLGLPEDHEVFEGKGTRGAECITEPVLVPLP-DAVKDDPVVWISAGPRYS 486
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
A+ +G L WG+G +LG G E + + P +I ++ +++ +QV+ GGQH V L K
Sbjct: 487 MAVTQDGALLSWGVGEQSELGLGDETEAVTP-QIVVRRTGSWSAMQVSCGGQHVVGLFKK 545
Query: 496 K 496
+
Sbjct: 546 R 546
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 35/352 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V GQGD GQ+G R T L++V+++ G T+ L DG V+TWG N
Sbjct: 53 GDVYVWGQGDRGQIGDAA-WNARNTPVQARGLNDVMDIHTGVRSTMALRSDGTVWTWGSN 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAG-DSHSVALLEDGTVYAWGSFRDSHGSMG 155
+ G LG D +P V+ IS G HS+AL E+GTV+ WG ++ +G +G
Sbjct: 112 ENGQLGIGTTADKN-VPTPVSGLSGIKAISGGLGYHSMALTENGTVWTWG--KNDNGELG 168
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
Q +P+ + +S + IA+G + + L S G + G G+LG T
Sbjct: 169 NGTTVQQNSPVLVIGLSDVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGT------- 221
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
+ P++ + DV G ++ I G++ A+G+N Y LG+
Sbjct: 222 -------IVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGINMYGTLGDGT--- 271
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
T P +++L + +A G HHSLAL+ EG ++ +G + G+LGL + S
Sbjct: 272 ----RTNRTIPVKVRNL--QHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSR 325
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
T P + ++ + IA G S A+ +G ++GWG+ + Q+G+G +D
Sbjct: 326 TT-PEQLTGIEH--VLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRND 374
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 179/399 (44%), Gaps = 63/399 (15%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
++V G HT L G VY WG D G +G +A ++ P + I G +
Sbjct: 38 KLVAGYYHTASLVSSGDVYVWGQGDRGQIG-DAAWNARNTPVQARGLNDVMDIHTGVRST 96
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG-ADHFVMLTSRG 191
+AL DGTV+ WGS + +G +G+ + P + +SGI I+ G H + LT G
Sbjct: 97 MALRSDGTVWTWGS--NENGQLGIGTTADKNVPTPVSGLSGIKAISGGLGYHSMALTENG 154
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFI 247
+ T G + G+LG T + +N+ P+ + DV G Y+ +
Sbjct: 155 TVWTWGKNDNGELGNGT--TVQQNS------------PVLVIGLSDVTAIAAGGYYSLAL 200
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G+I A+G N +LG+ + V K TP + LSD + +G HSLA+
Sbjct: 201 KSDGTIWAWGANGNGELGDG-TIVDK------HTPVQVSGLSD--VIAITAGGSHSLAIK 251
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++A+G + YG LG T P + +LQ I +IA G S A+D EG ++G
Sbjct: 252 QDGTVWAWGINMYGTLG-DGTRTNRTIPVKVRNLQH--IKAIAGGGHHSLALDQEGNVWG 308
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG + QLG G H+ R T P + ++ +
Sbjct: 309 WGDNSRGQLGLG-----------------HNSSR----------TTPEQLTGIEH--VLD 339
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
IA G S A+ +G ++GWG+ + Q+G+G +D P
Sbjct: 340 IAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRNDRNAP 378
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 167/371 (45%), Gaps = 56/371 (15%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADH 183
++ AG H+ +L+ G VY WG + G +G + TP++ ++ ++ I +G
Sbjct: 38 KLVAGYYHTASLVSSGDVYVWG--QGDRGQIGDAAWNARNTPVQARGLNDVMDIHTGVRS 95
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L S G + T G E GQLG T +A +N +S L K I G +
Sbjct: 96 TMALRSDGTVWTWGSNENGQLGIGT--TADKNVPTPVSGLS------GIKAISGGL-GYH 146
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ ++ G++ +G N+ +LG + Q S P L+ LSD T +A+G ++S
Sbjct: 147 SMALTENGTVWTWGKNDNGELGNGTTVQQNS-------PVLVIGLSD--VTAIAAGGYYS 197
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL S+G I+A+G + G LG + + T P + L D + +I G S AI +G
Sbjct: 198 LALKSDGTIWAWGANGNGELGDGTIVDKHT-PVQVSGLSD--VIAITAGGSHSLAIKQDG 254
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
++ WG+ LG+G + T P + +LQ
Sbjct: 255 TVWAWGINMYGTLGDGTRTN---------------------------RTIPVKVRNLQH- 286
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
I +IA G S A+D EG ++GWG + QLG G P ++ G + VL +A
Sbjct: 287 -IKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLTGIE----HVLDIA 341
Query: 484 SGGQHSVILAK 494
GG HS L K
Sbjct: 342 GGGFHSAALKK 352
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 16/234 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G V T G+ D G+LG G V ++ + LV L +V + GG +++ L DG ++ W
Sbjct: 151 TENGTVWTWGKNDNGELGNGTTV-QQNSPVLVIGLSDVTAIAAGGYYSLALKSDGTIWAW 209
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G N G LG D + P V+ + I+AG SHS+A+ +DGTV+AWG + +G+
Sbjct: 210 GANGNGELGDGTIVD-KHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGI--NMYGT 266
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+G + P+K+ ++ I IA G H + L GN+ G +GQLG ++S
Sbjct: 267 LGDGTRTNRTIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLG--LGHNSS 324
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVF-TGVYNTFISSKGSILAFGLNNYSQLGE 266
R ++ +E H+ D+ G ++ + G + +GLN+ Q+G+
Sbjct: 325 RTTPEQLTGIE---------HVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGD 369
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G G+LG G ++++ T V L +V+ + GG H++ + +DG V+ WG N
Sbjct: 204 GTIWAWGANGNGELGDGT-IVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGIN 262
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + IP V + I+ G HS+AL ++G V+ WG +S G +GL
Sbjct: 263 MYGTLG-DGTRTNRTIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGD--NSRGQLGL 319
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP +L + ++ IA G H L G + G GQ+G T+ RNA
Sbjct: 320 GHNSSRTTPEQLTGIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRN--DRNA 377
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 171/347 (49%), Gaps = 30/347 (8%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NV 71
E P V V++ A ++ G V+ T G+G+ GQLG G D +R ++ D +
Sbjct: 11 EAPPAVVLVSAGASHSVAL-LAGNVLCTWGRGEDGQLGHG-DAEDRLVPTVISGFDAPGI 68
Query: 72 VEVVVGGMHTVCLTED-GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
V+ G HT +ED +VY+WG D G LG D F PQ V + K Q++ G
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDV-FTPQPVKALQGIKIKQLACG 127
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHFVM 186
DSH +A+ G V +WG R+ +G +GL P +++ GI VK IA+GA+H
Sbjct: 128 DSHCLAVTMAGEVLSWG--RNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAA 185
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+T G++ G G LG RN R F+ ++ + V G +T
Sbjct: 186 VTEDGDIYGWGWGRYGNLGL-----GDRNDR----FVPEKVSSVEGDKMVLVACGWRHTI 236
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+SS GS+ +G + Y QLG D E PH +++L D + ++ G H++A
Sbjct: 237 TVSSSGSLYTYGWSKYGQLGHGDFEDH-------LVPHKVEALKDSSTSQISGGWRHTMA 289
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
L S+GK+Y +G + +G++G + ++ + P + +++ + +ACG
Sbjct: 290 LTSDGKLYGWGWNKFGQVGAGDNADHCS-PAQVNFPEEQKVAQVACG 335
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 158/353 (44%), Gaps = 50/353 (14%)
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGE 227
E+ +V +++GA H V L + L T G E GQLG + R +S F PG
Sbjct: 11 EAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH--GDAEDRLVPTVISGFDAPG- 67
Query: 228 VPLKRKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
I V G +T + + + ++G ++ +LG +S T FTP +
Sbjct: 68 -------ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS-------TDVFTPQPV 113
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
K+L K LA G H LA+ G++ ++GR+ G+LGL + + P I + + +
Sbjct: 114 KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAFEGIS 172
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G + A+ +G +YGWG G LG G +D
Sbjct: 173 VKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGW 232
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
++S G +Y +G YG+LG + + + P + +L+D + + I+ G + A+
Sbjct: 233 RHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALT 291
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S+G LYGWG Q+G G D P ++ + V QVA G +H++
Sbjct: 292 SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPE--EQKVAQVACGWRHTLAF 342
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 38/325 (11%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTV---NLPKKAVQI 125
VV V G H+V L + TWG ++G LG GD+E +P + + P I
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH---GDAEDRLVPTVISGFDAPGITSVI 72
Query: 126 SAGDSHSVALLED-GTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IVKIAS 179
D H+ A ED VY+WG G G G G TP ++++ G I ++A
Sbjct: 73 CGAD-HTTAYSEDEHQVYSWG-----WGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLAC 126
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + +T G +L+ G + GQLG T S L + + +
Sbjct: 127 GDSHCLAVTMAGEVLSWGRNQNGQLGLGTTED---------SLLPQTIQAFEGISVKMIA 177
Query: 240 TGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +T ++ G I +G Y LG D + F P + S+ K ++A
Sbjct: 178 AGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDR-------FVPEKVSSVEGDKMVLVAC 230
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++ ++S G +Y +G YG+LG + + + P + +L+D + + I+ G + A
Sbjct: 231 GWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMA 289
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ S+G LYGWG Q+G G D
Sbjct: 290 LTSDGKLYGWGWNKFGQVGAGDNAD 314
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 129/281 (45%), Gaps = 37/281 (13%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G DV + ++ + + ++ G H + +T G+V +WG N
Sbjct: 88 VYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLAVTMAGEVLSWGRN 146
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG DS +PQT+ + I+AG H+ A+ EDG +Y WG R +G++
Sbjct: 147 QNGQLGLGTTEDS-LLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGR--YGNL 203
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL + P K+ SV G +V +A G H + ++S G+L T G + GQLG
Sbjct: 204 GLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGH------ 257
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFT-----GVYNTF-ISSKGSILAFGLNNYSQLGE 266
E VP K + + D T G +T ++S G + +G N + Q+G
Sbjct: 258 --------GDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA 309
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
D N +P + ++K +A G H+LA
Sbjct: 310 GD-------NADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 174/364 (47%), Gaps = 50/364 (13%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGC 95
VL G G+ GQLG+G + E+ VE L V VV G +++ + +DG+++TWG
Sbjct: 9 AVLAWGSGEDGQLGMGGN-EEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGW 67
Query: 96 NDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF------ 147
N G LG E +E P V+ K VQ + G H +A+ + G YAWG
Sbjct: 68 NQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 127
Query: 148 ----RDSHGSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
R G+ L+ + Q+ LKL+ + ++A+G H V+LT G++ T G P
Sbjct: 128 EEPERKEDGTRALRRDIPIPQRCALKLK----VRQVAAGGTHSVVLTQEGHVWTWGQPWP 183
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV---FTGVYNTFISSKGSIL-AFG 257
G I Q S P++ + ++ V G ++ ++ IL A+G
Sbjct: 184 --PGDIKQIS----------------TPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWG 225
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N Y QLG D++ + P ++ LSD +A+G HS AL +G++YA+GR
Sbjct: 226 NNEYGQLGTGDTQPRSQ-------PIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGR 278
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
++GRLG + P + L + I ++CG S A+ +G ++ +G G+ +LG
Sbjct: 279 GEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLG 338
Query: 378 NGKE 381
G++
Sbjct: 339 YGRK 342
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 189/419 (45%), Gaps = 59/419 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
V WG ++G LG + ++ P V P + AG +S+A+ +DG ++ WG
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDW-PHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGW- 67
Query: 148 RDSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ G++G E + +P +++++G IV+ A G H + + +G G E GQ
Sbjct: 68 -NQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 126
Query: 205 GRITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
G +R +R RR + P LK K G ++ ++ +G + +G
Sbjct: 127 GEEPERKEDGTRALRRDIPI--PQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWG----- 179
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
Q Q S TP ++ L +K ++A G H+LAL + ++A+G ++YG+
Sbjct: 180 QPWPPGDIKQIS------TPVRVQGL--EKVRVIAVGAFHNLALTEDVILWAWGNNEYGQ 231
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + ++P ++P + L D ++ IA G S A
Sbjct: 232 LGTGD-TQPRSQPIRVEGLSDLSLVDIAAGGWHSTA------------------------ 266
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L +G++YA+GR ++GRLG + P + L + I ++CG S A+ +G
Sbjct: 267 --LTIDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDG 324
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMK-------IEGKQLNNYTVLQVASGGQHSVILAK 494
++ +G G+ +LG G++ PM+ + + + VA GG+H++ +A+
Sbjct: 325 RMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIAE 383
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D VE L +++V+V GG H+V L DG+++++G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYG 330
Query: 95 CNDEGALG---REAEGDSEFIPQTVNLPK---------KAVQISAGDSHSVALLE 137
D G LG + G +P +NLP +A ++ G H++A+ E
Sbjct: 331 RGDHGRLGYGRKVTTGHPMELP--INLPPLSSSRDGRWQAKYVACGGRHTLAIAE 383
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 174/342 (50%), Gaps = 45/342 (13%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V + G G G+LG G D + +E L ++ + G H++ LT+ G VY++G
Sbjct: 49 VFSFGMGMYGKLGHG-DTANQLAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGF--- 104
Query: 99 GALGREAEG--DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G GR G DS+ P+ + I+AGD HS+AL + G VY++G +G+ GL
Sbjct: 105 GLFGRLGHGNTDSQLEPKKIEGLSDIQAIAAGDFHSLALTKSGDVYSFG-----NGTSGL 159
Query: 157 KGEG---IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
G G Q TP K+ES+S + IA+G +H + LT G++ + G G+LG S
Sbjct: 160 -GHGNTEDQSTPKKIESLSDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ- 217
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADS 269
LEP ++ + + D+ G ++ ++ G + +FG + QLG D+
Sbjct: 218 ---------LEPKKI----EDLSDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDT 264
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E Q TP I+ LSD +A+G +HSLAL G++Y+FGR + G+LG +
Sbjct: 265 ENQ-------LTPKKIEDLSD--IQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTD 315
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+ +T P I L+D I +IA G+ S A+ G +Y +G G
Sbjct: 316 DQLT-PKKIEGLKD--IQAIAAGDFHSLALTKSGDVYSFGNG 354
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 177/368 (48%), Gaps = 57/368 (15%)
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G +G Q P K+E +S I IA+G +H + LT G++ + G G+LG
Sbjct: 57 YGKLGHGDTANQLAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTD 116
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
S LEP ++ I + G +++ ++ G + +FG N S LG ++
Sbjct: 117 SQ----------LEPKKIE-GLSDIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLGHGNT 164
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E Q TP I+SLSD + +A+G +HSLAL G +Y+FG +GRLG +
Sbjct: 165 EDQS-------TPKKIESLSDVQ--AIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTD 215
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---------K 380
+ EP I L D I +IA G S A+ G +Y +G G QLG+G K
Sbjct: 216 SQL-EPKKIEDLSD--IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKK 272
Query: 381 EDDI---------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+D+ L G++Y+FGR + G+LG + + +T P I L+D I
Sbjct: 273 IEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLT-PKKIEGLKD--I 329
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+IA G+ S A+ G +Y +G G LG+G + LEP KIEG + +A+G
Sbjct: 330 QAIAAGDFHSLALTKSGDVYSFGNGTS-GLGHGDTANQLEPKKIEGLT----DIQAIAAG 384
Query: 486 GQHSVILA 493
HS+ LA
Sbjct: 385 ANHSLALA 392
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 126/267 (47%), Gaps = 44/267 (16%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
S+ +FG+ Y +LG D+ Q P I+ LSD +A+G +HSLAL G
Sbjct: 48 SVFSFGMGMYGKLGHGDTANQ-------LAPKKIEGLSD--IQAIAAGTNHSLALTKSGD 98
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+Y+FG +GRLG N + EP I L D I +IA G+ S A+ G +Y +G G
Sbjct: 99 VYSFGFGLFGRLGHGNTDSQL-EPKKIEGLSD--IQAIAAGDFHSLALTKSGDVYSFGNG 155
Query: 372 NGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNV 407
LG+G +D L G +Y+FG +GRLG +
Sbjct: 156 TS-GLGHGNTEDQSTPKKIESLSDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDT 214
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
+ EP I L D I +IA G S A+ G +Y +G G QLG+G ++ L P
Sbjct: 215 DSQL-EPKKIEDLSD--IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK 271
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
KIE L++ + VA+G HS+ L K
Sbjct: 272 KIE--DLSD--IQAVAAGANHSLALTK 294
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 29/278 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G V + G G +G LG G + ++ T +E L +V + GG H++ LT+ G VY++
Sbjct: 144 TKSGDVYSFGNGTSG-LGHG-NTEDQSTPKKIESLSDVQAIAAGGNHSLALTKSGDVYSF 201
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G G LG + DS+ P+ + I+AG +HS+AL + G VY++G HG
Sbjct: 202 GFGLFGRLGH-GDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFG--WGLHGQ 258
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSA 212
+G Q TP K+E +S I +A+GA+H + LT G + + G GQLG T
Sbjct: 259 LGHGDTENQLTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQL 318
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEV 271
+ G+ K I + G +++ ++ G + +FG N S LG D+
Sbjct: 319 TPKKIEGL------------KDIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLGHGDTAN 365
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
Q P I+ L+D +A+G +HSLAL E
Sbjct: 366 Q-------LEPKKIEGLTD--IQAIAAGANHSLALAVE 394
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 180/408 (44%), Gaps = 56/408 (13%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTF---ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V + G+G+ GQLGLG + + AL E +V++ G HTV LTE+G+VYTWG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER--RIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 96 NDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
D+G LG G +F+P+ V K Q++ G H+ A+ G +Y WG +G
Sbjct: 61 GDDGRLGHGDNG-WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG--GMYGK 117
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G E TP +E++ + ++A G+ H V+L ++ T G E G G
Sbjct: 118 LGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG------ 171
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGSILAFGLNNYSQLGEADSE 270
G +L L+ K I + G + +S G + FG + +LG
Sbjct: 172 --HGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
Q + +L+ K+ +A G H+ A+ G++Y +G ++G+LG +
Sbjct: 230 NQP-------VARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVN 282
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK 390
T PT + SL +K + I CG + + G +Y WG G
Sbjct: 283 K-TVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNG------------------- 322
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
D+G+LG N + VT P P+ L K + S+A N + A+
Sbjct: 323 -------DHGKLG-HNDTAKVTLPKPVDVLDGKRVISVASYNEHTVAL 362
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 55/412 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY+WG ++G LG D +P ++ VQI+ G H+V L E+G VY WG R
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWG--R 60
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +G G + P +E + G I ++ G+ H +T G+L T G G+LG
Sbjct: 61 GDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120
Query: 207 ITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKG-SILAFGLNNYSQL 264
+ S P V LK + V G +T + + + +G
Sbjct: 121 GNETGHS----------TPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVS 170
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D+E + + P ++ L K +++ H+ AL+ G+++ FG +GRLG
Sbjct: 171 GHGDTEGHQ------YLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLG 224
Query: 325 LKN-VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++PV + +L K + +ACG + A+ G +Y WG G QLG+G D
Sbjct: 225 HNSERNQPVARF--VDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHG---D 279
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+N T PT + SL +K + I CG + + G
Sbjct: 280 KVNK------------------------TVPTRVESLLEKLVLQITCGWSHTVTLTDTGE 315
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+Y WG G+ +LG+ + P ++ L+ V+ VAS +H+V L P
Sbjct: 316 VYTWGNGDHGKLGHNDTAKVTLPKPVD--VLDGKRVISVASYNEHTVALVDP 365
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 34/347 (9%)
Query: 27 VPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVG 77
+ + C +G VVLT G+GD G+LG G D + LVE+L N+ +V G
Sbjct: 36 IVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHG-DNGWKFVPRLVEELRGKNIRQVTCG 94
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
HT +T G +YTWG G LG E + ++ +T+ + Q++ G H+V L
Sbjct: 95 SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLK-SMQVRQVACGSRHTVVL 153
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
LE+ VY WG + G EG Q P +E + G IV+I++ H L+ G +
Sbjct: 154 LENKDVYTWGDKENGVSGHG-DTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEV 212
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGS 252
T G + G+LG ++R+ AR F++ L K + V G ++T ++ G
Sbjct: 213 FTFGEGKFGRLGHNSERNQPV-AR----FVD----ALAGKRVKQVACGGFHTAAVTETGE 263
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G + QLG D +V K+ P ++SL +K + G H++ L G++
Sbjct: 264 VYTWGGGEHGQLGHGD-KVNKT------VPTRVESLLEKLVLQITCGWSHTVTLTDTGEV 316
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
Y +G D+G+LG N + VT P P+ L K + S+A N + A+
Sbjct: 317 YTWGNGDHGKLG-HNDTAKVTLPKPVDVLDGKRVISVASYNEHTVAL 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+Y++GR + G+LGL + S+ P PI +L ++ I IACG+
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQ-HRPVPIDALAERRIVQIACGS------------------ 43
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
G+ + +L EG++Y +GR D GRLG + P + L+ K I + CG
Sbjct: 44 -GHTV-------VLTEEGEVYTWGRGDDGRLGHGDNGWKFV-PRLVEELRGKNIRQVTCG 94
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ + A+ G LY WG G +LG+G E P +E L + V QVA G +H+V+
Sbjct: 95 SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVE--TLKSMQVRQVACGSRHTVV 152
Query: 492 LAKPK 496
L + K
Sbjct: 153 LLENK 157
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 207/439 (47%), Gaps = 42/439 (9%)
Query: 49 QLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD 108
++ + P+ ++R A +++ ++V G H +T+DG++YTWG N G LG E
Sbjct: 1103 KIRIDPE-LKRFPMAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLE-- 1159
Query: 109 SEFIPQTVNLPKKA---------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE 159
+ +T++LPK+ + G H++A+ + VY+WGS D G +G +
Sbjct: 1160 ---VNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGS--DKFGQLGHGTK 1214
Query: 160 GI-QKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ Q P +E ++G I IA+G H ++L G L + G + GQLG + S +
Sbjct: 1215 AVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPT 1274
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSE-VQKS 274
R ++ + G I + G ++ I S+ G + ++GL QLG E + K
Sbjct: 1275 RIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISK- 1333
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P LI++L + T ++ G H++A +Y++G ++ +LG + + +
Sbjct: 1334 -------PRLIETL--RGVTKISCGHFHTVATTDLKNVYSWGSGEHMKLG-HSSDKDESV 1383
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P + K ++ + CG + I + + N Q +E+ S IYA+
Sbjct: 1384 PKVVDFFIQKNVSKVVCGQNHTMTI-----TFPDDLNNSNQDDEDEENMNGKSSSPIYAW 1438
Query: 395 GRHDYGRLGLK-NVSEPVTE---PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
G ++G+LGL ++ P + PT I + + I+CG+ S I S +Y WG G
Sbjct: 1439 GSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCG 1498
Query: 451 NGYQLGNGKEDDILEPMKI 469
Q+GNGK DD+ P +I
Sbjct: 1499 RFGQIGNGKNDDVWVPTRI 1517
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 60/343 (17%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
PLK E + +K++ G DH ++T G L T G + GQLG + + + + + + F
Sbjct: 1117 PLKNEKKA--IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR 1174
Query: 225 PGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
G+ P +F G + + S + ++G + + QLG V +S
Sbjct: 1175 -GKSP--------IFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQS------ 1219
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-----KNVSEPVTEP 335
P +I+ L+ +K +A+G H++ L G++++FG D+G+LG KN+ +
Sbjct: 1220 RPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEIN 1279
Query: 336 TPIPSLQDK---TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
+ LQ IT IACG S G +Y WG+G QLG+
Sbjct: 1280 AIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHK------------- 1326
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
V E +++P I +L + +T I+CG+ + A +Y WG G
Sbjct: 1327 --------------VFENISKPRLIETL--RGVTKISCGHFHTVATTDLKNVYSWGSGEH 1370
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+LG+ + D P ++ N V +V G H++ + P
Sbjct: 1371 MKLGHSSDKDESVPKVVDFFIQKN--VSKVVCGQNHTMTITFP 1411
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 36 GGVVLTCGQGDTGQLGLG----PDVMERKTFALV------EDLDNVVEVVVGGMHTVCLT 85
G + + G GD GQLG G ++ R + D + ++ G H+V +
Sbjct: 1248 SGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICS 1307
Query: 86 EDGKVYTWGCNDEGALGREA-EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
E+G+VY+WG +G LG + E S+ P+ + + +IS G H+VA + VY+W
Sbjct: 1308 ENGEVYSWGLGKQGQLGHKVFENISK--PRLIETLRGVTKISCGHFHTVATTDLKNVYSW 1365
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNL 193
GS H +G + + P ++ + K+ G +H + +T +L
Sbjct: 1366 GS--GEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDL 1414
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 169/352 (48%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
GCND G LG E P+ V + V +S G++H++AL + G VYAWG D
Sbjct: 59 GCNDLGQLGHEKARKR---PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD-- 113
Query: 152 GSMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL G E + P + S+S IV++A G H + L+ + + G + GQLG
Sbjct: 114 GQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY 173
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ + + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 174 EYKKQTSPQMIKSLL---GIPFAQIAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + P L+KSL +K + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 227 DNDR-------YVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
S + P + L +T I CG + A + S G +Y +G+G QLG G
Sbjct: 280 SHEIN-PRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 166/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG +++ R G L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGH--EKARKRPEHVG---------ALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L QLG +E C P I+SLS+ + +A G +HSLAL+ +++++G+
Sbjct: 110 LATDGQLGLPGTE------ECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
++D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T I CG + A + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + Y V ++ SGG S
Sbjct: 343 GSWIPFSPQCPMSTDSEECYCVKRIFSGGDQS 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG +R D N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG-HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ +G +
Sbjct: 112 TDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E ++T P ++S+ GI +IA+G H +LT G + G + GQLG
Sbjct: 170 GLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + + + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDDNDRYVPTLLK----SLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T + G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E V P I SL + I +AC
Sbjct: 99 --------------LNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L Q+A+GG HS
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMI--KSLLGIPFAQIAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG + ++ + +++ L + ++ GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG + D ++P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDDND-RYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADH-FVMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +I G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ + P I + L+ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNI--RSLSEIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 177/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L S G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG YG+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL S+G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG YG+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 159/337 (47%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALASDGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG +Y QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSYGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 176/379 (46%), Gaps = 62/379 (16%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADH 183
QIS G SHS+ L DGTV+AWG + G +G +K ++++ + +V IA+G +H
Sbjct: 40 QISGGGSHSLVLKPDGTVWAWGG--NHAGQLGDGTTNPRKFAIQVKGLEDVVSIAAGWEH 97
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF---T 240
+ + S G + G GQLG T +RN P+K K I DV
Sbjct: 98 NLAVKSDGTVWAWGNNRFGQLGDGTNE--NRN------------TPVKVKTIKDVTEIDA 143
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G Y++ + S G++ +G N QLG+ + + P ++ L++ ++ G
Sbjct: 144 GFYHSIALQSDGTVWVWGNNELDQLGDGTK-------SDAYKPMQVQGLNN--VVAVSGG 194
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HH+L L ++G I+ +G + YG+LG ++E + PTP+ IA GN + A+
Sbjct: 195 NHHNLVLKADGTIWGWGANGYGQLGDGTMTES-SIPTPVYDFNGAVF--IASGNNYNVAV 251
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFG 395
++G ++GWGM QLGNG + + IL +G + + G
Sbjct: 252 KADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNNSVSIATGGYHALILQQDGTVLSMG 311
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ G+LG S + L D + SIA G S A+ +G ++ WG QL
Sbjct: 312 YNRTGQLGTGATSNYQYTTLKVHGLSD--VVSIAAGYYHSLALKKDGTIWAWGNNEYGQL 369
Query: 456 GNG----KEDDILEPMKIE 470
G+G K+ IL +K++
Sbjct: 370 GDGTLNYKKLPILSQIKLD 388
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 153/347 (44%), Gaps = 33/347 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G RK V+ L++VV + G H + + DG V+ WG N
Sbjct: 55 GTVWAWGGNHAGQLGDGT-TNPRKFAIQVKGLEDVVSIAAGWEHNLAVKSDGTVWAWGNN 113
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + ++ P V K +I AG HS+AL DGTV+ WG+ G
Sbjct: 114 RFGQLG-DGTNENRNTPVKVKTIKDVTEIDAGFYHSIALQSDGTVWVWGNNELDQLGDGT 172
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
K + + P++++ ++ +V ++ G H ++L + G + G GQLG T +S
Sbjct: 173 KSDAYK--PMQVQGLNNVVAVSGGNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIPT 230
Query: 217 ----RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
G F+ G YN + + GSI +G+N Y QLG
Sbjct: 231 PVYDFNGAVFIASGN--------------NYNVAVKADGSIWGWGMNTYGQLGNGTQTNS 276
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
K P I L++ +A+G +H+L L +G + + G + G+LG S
Sbjct: 277 K-------IPIRINGLNNS--VSIATGGYHALILQQDGTVLSMGYNRTGQLGTGATSNYQ 327
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ L D + SIA G S A+ +G ++ WG QLG+G
Sbjct: 328 YTTLKVHGLSD--VVSIAAGYYHSLALKKDGTIWAWGNNEYGQLGDG 372
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 142/278 (51%), Gaps = 43/278 (15%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ + G++ A+G N+ QLG+ + +K F +K L D +A+G
Sbjct: 45 GSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRK------FAIQ-VKGLED--VVSIAAGW 95
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H+LA+ S+G ++A+G + +G+LG +E P + +++D +T I G S A+
Sbjct: 96 EHNLAVKSDGTVWAWGNNRFGQLG-DGTNENRNTPVKVKTIKD--VTEIDAGFYHSIALQ 152
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGR 396
S+G ++ WG QLG+G + D +L ++G I+ +G
Sbjct: 153 SDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADGTIWGWGA 212
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ YG+LG ++E + PTP+ IA GN + A+ ++G ++GWGM QLG
Sbjct: 213 NGYGQLGDGTMTES-SIPTPVYDFNGAVF--IASGNNYNVAVKADGSIWGWGMNTYGQLG 269
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
NG + + P++I G LNN + +A+GG H++IL +
Sbjct: 270 NGTQTNSKIPIRING--LNN--SVSIATGGYHALILQQ 303
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G + QLG G K V+ L+NVV V G H + L DG ++ WG N
Sbjct: 155 GTVWVWGNNELDQLGDGTKSDAYKPMQ-VQGLNNVVAVSGGNHHNLVLKADGTIWGWGAN 213
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG +S IP V AV I++G++++VA+ DG+++ WG +++G +G
Sbjct: 214 GYGQLGDGTMTESS-IPTPVYDFNGAVFIASGNNYNVAVKADGSIWGWG--MNTYGQLGN 270
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ K P+++ ++ V IA+G H ++L G +L+ G GQLG A+ N
Sbjct: 271 GTQTNSKIPIRINGLNNSVSIATGGYHALILQQDGTVLSMGYNRTGQLG----TGATSNY 326
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT---GVYNTFISSK-GSILAFGLNNYSQLGEADSEVQ 272
+ LK + DV + G Y++ K G+I A+G N Y QLG+ +
Sbjct: 327 QY---------TTLKVHGLSDVVSIAAGYYHSLALKKDGTIWAWGNNEYGQLGDGTLNYK 377
Query: 273 K 273
K
Sbjct: 378 K 378
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 36/197 (18%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++ G HSL L +G ++A+G + G+LG + P + L+D + SIA G
Sbjct: 41 ISGGGSHSLVLKPDGTVWAWGGNHAGQLG-DGTTNPRKFAIQVKGLED--VVSIAAGWEH 97
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
+ A+ S+G ++ W G + +G+LG +E P
Sbjct: 98 NLAVKSDGTVWAW--------------------------GNNRFGQLG-DGTNENRNTPV 130
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
+ +++D +T I G S A+ S+G ++ WG QLG+G + D +PM+++G LN
Sbjct: 131 KVKTIKD--VTEIDAGFYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQG--LN 186
Query: 476 NYTVLQVASGGQHSVIL 492
N V+ V+ G H+++L
Sbjct: 187 N--VVAVSGGNHHNLVL 201
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM 79
VF+ S + K G + G GQLG G K + L+N V + GG
Sbjct: 239 VFIASGNNYNVAVKADGSI-WGWGMNTYGQLGNGTQT-NSKIPIRINGLNNSVSIATGGY 296
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H + L +DG V + G N G LG A + ++ V+ V I+AG HS+AL +DG
Sbjct: 297 HALILQQDGTVLSMGYNRTGQLGTGATSNYQYTTLKVHGLSDVVSIAAGYYHSLALKKDG 356
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPL 166
T++AWG+ + +G +G +K P+
Sbjct: 357 TIWAWGN--NEYGQLGDGTLNYKKLPI 381
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 38 VVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
VL G G+ GQLG+G + R AL D V VV G +++ + DG+++TWG
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAAL--DALAVSAVVAGSRNSLAICADGRLFTWG 69
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG------- 145
N G LG E +E P V+ VQ + G H +A+ + G YAWG
Sbjct: 70 WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129
Query: 146 ---SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
+ R G+ L+ + P + ++A+G H V+LT G++ T G P
Sbjct: 130 GEEAERKEDGTRALRRD--IPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP- 186
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGL 258
G I Q S P++ + +++V +N ++ G + A+G
Sbjct: 187 -PGDIKQIS----------------TPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGN 229
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N Y QLG D++ + P ++ LSD +A+G HS AL EG++YA+GR
Sbjct: 230 NEYGQLGTGDTQPRSQ-------PIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRG 282
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
++GRLG + P + L + I ++CG S A+ +G ++ +G G+ +LG
Sbjct: 283 EHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY 342
Query: 379 GKE 381
G++
Sbjct: 343 GRK 345
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 60/420 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V WG ++G LG + ++ L AV + AG +S+A+ DG ++ WG
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWG--W 70
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + +P +++++G IV+ A G H + + +G G E GQ G
Sbjct: 71 NQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 130
Query: 206 RITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+R +R RR + + LK + + G ++ ++ G + +G
Sbjct: 131 EEAERKEDGTRALRRDIPIPQGCAPKLKVRQV--AAGGTHSVVLTQDGHVWTWGQP---- 184
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
++++ TP ++ L + K ++A G H+LAL +G ++A+G ++YG+L
Sbjct: 185 --WPPGDIKQ-----ISTPVRVQGLENVK--VIAVGAFHNLALTEDGILWAWGNNEYGQL 235
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++P ++P + L D ++ IA G S A
Sbjct: 236 GTGD-TQPRSQPIRVEGLSDLSLVDIAAGGWHSTA------------------------- 269
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L EG++YA+GR ++GRLG + P + L + I ++CG S A+ +G
Sbjct: 270 -LTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGR 328
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIE----------GKQLNNYTVLQVASGGQHSVILA 493
++ +G G+ +LG G++ PM++ G + VA GG+H++ +A
Sbjct: 329 MFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 161/366 (43%), Gaps = 63/366 (17%)
Query: 140 TVYAWGSFRDSHGSMGLKG---EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
V AWGS D G +G+ G E + L++++ + + +G+ + + + + G L T
Sbjct: 12 AVLAWGSGED--GQLGMGGYEEEDWARGVAALDALA-VSAVVAGSRNSLAICADGRLFTW 68
Query: 197 GCPEQGQLG-----RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
G ++G LG + A +A G+S ++ G + + KG
Sbjct: 69 GWNQRGTLGHPPETKTESSPAPVDALAGVSIVQA------------AIGGWHCLAVDDKG 116
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFF--TPHLIKSLSDKKFTMLASGQHHSLALNSE 309
A+G N Y Q GE ++E ++ G P K +A+G HS+ L +
Sbjct: 117 RAYAWGGNEYGQCGE-EAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQD 175
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++ +G+ + +K +S PV + L++ + IA G + A+ +G+L+ WG
Sbjct: 176 GHVWTWGQ-PWPPGDIKQISTPVR----VQGLEN--VKVIAVGAFHNLALTEDGILWAWG 228
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
++YG+LG + ++P ++P + L D ++ IA
Sbjct: 229 --------------------------NNEYGQLGTGD-TQPRSQPIRVEGLSDLSLVDIA 261
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-LEPMKIEGKQLNNYTVLQVASGGQH 488
G S A+ EG +Y WG G +LG G + + P K+E L ++QV+ GG H
Sbjct: 262 AGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVE--LLAGEDIIQVSCGGTH 319
Query: 489 SVILAK 494
SV L +
Sbjct: 320 SVALTR 325
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+G+ G+LG G D VE L +++++V GG H+V LT DG+++++G
Sbjct: 274 GEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYG 333
Query: 95 CNDEGALG 102
D G LG
Sbjct: 334 RGDHGRLG 341
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 183/395 (46%), Gaps = 63/395 (15%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
++V G HT L G+VY+WG D G LG + ++ P + I +G S
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLG-DGTWNTRTTPVMAKNLNHVIDIHSGVRSS 95
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG-ADHFVMLTSRG 191
+AL +DGTV+ WG+ + +G +G+ P ++ +SGI I+ G A H + L+ G
Sbjct: 96 MALRQDGTVWTWGA--NENGQLGIGTITNVNAPAQVPGLSGIKAISGGLAYHGMALSENG 153
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFI 247
+ T G + G+LG T + +N+ P+ + DV G Y+ +
Sbjct: 154 TVWTWGKNDNGELGNGT--TIQQNS------------PVLVAGLSDVTAIAAGGYYSLAL 199
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G++ A+G+N +LG+ + T P + L+D +A+G HSLA+
Sbjct: 200 KSDGTVWAWGVNGSGELGDGTT-------TDRHVPVQVAGLTD--VMAIAAGGSHSLAIK 250
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++A+G + YG LG T P + +LQ I ++A G S A+D G ++
Sbjct: 251 QDGTVWAWGNNTYGTLG-DGTRTHRTRPVQVRNLQH--IVAVAGGGYHSLAVDRAGNVWS 307
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG + QLG LNS N S + P P+P ++ +
Sbjct: 308 WGDNSQQQLG-------LNS------------------NASSLI--PVPVPGIEH--VRE 338
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
I+ G S A+ +G ++GWG +G Q+G+G ++
Sbjct: 339 ISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNN 373
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 177/353 (50%), Gaps = 37/353 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G GD GQLG G R T + ++L++V+++ G ++ L +DG V+TWG N
Sbjct: 52 GEVYSWGYGDRGQLGDG-TWNTRTTPVMAKNLNHVIDIHSGVRSSMALRQDGTVWTWGAN 110
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS-HSVALLEDGTVYAWGSFRDSHGSMG 155
+ G LG + Q L IS G + H +AL E+GTV+ WG ++ +G +G
Sbjct: 111 ENGQLGIGTITNVNAPAQVPGLSGIKA-ISGGLAYHGMALSENGTVWTWG--KNDNGELG 167
Query: 156 LKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G IQ+ +P+ + +S + IA+G + + L S G + G G+LG T + R
Sbjct: 168 -NGTTIQQNSPVLVAGLSDVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGT--TTDR 224
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ VP++ + DV G ++ I G++ A+G N Y LG+
Sbjct: 225 H------------VPVQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGT-- 270
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
T P +++L + +A G +HSLA++ G ++++G + +LGL + +
Sbjct: 271 -----RTHRTRPVQVRNL--QHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNAS 323
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ P P+P ++ + I+ G S A+ +G ++GWG +G Q+G+G ++
Sbjct: 324 SLI-PVPVPGIEH--VREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNN 373
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 62/348 (17%)
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK-- 233
KI +G H L S G + + G ++GQLG + N R P+ K
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLG-----DGTWNTR---------TTPVMAKNL 82
Query: 234 -HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
H+ D+ +GV ++ + G++ +G N QLG T P + LS
Sbjct: 83 NHVIDIHSGVRSSMALRQDGTVWTWGANENGQLGIGTI-------TNVNAPAQVPGLSGI 135
Query: 292 KFTMLASG-QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K ++ G +H +AL+ G ++ +G++D G LG + P + L D +T+IA
Sbjct: 136 K--AISGGLAYHGMALSENGTVWTWGKNDNGELG-NGTTIQQNSPVLVAGLSD--VTAIA 190
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILN 386
G S A+ S+G ++ WG+ +LG+G D +
Sbjct: 191 AGGYYSLALKSDGTVWAWGVNGSGELGDGTTTDRHVPVQVAGLTDVMAIAAGGSHSLAIK 250
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+G ++A+G + YG LG T P + +LQ I ++A G S A+D G ++
Sbjct: 251 QDGTVWAWGNNTYGTLG-DGTRTHRTRPVQVRNLQH--IVAVAGGGYHSLAVDRAGNVWS 307
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
WG + QLG L P+ + G + V ++++GG HSV + K
Sbjct: 308 WGDNSQQQLGLNSNASSLIPVPVPGIE----HVREISAGGFHSVAMKK 351
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 2 THLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT 61
TH + V Q N V V +L G V + G QLGL +
Sbjct: 272 THRTRPV---QVRNLQHIVAVAGGGYHSLAVDRAGNV-WSWGDNSQQQLGLNSNASSLIP 327
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
V +++V E+ GG H+V + +DG V+ WG N G +G ++ IP L K
Sbjct: 328 VP-VPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRGIP---TLTKA 383
Query: 122 AVQISAGDSHSVAL 135
+ ++ D+ S +L
Sbjct: 384 VLDTTSPDTGSGSL 397
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 189/434 (43%), Gaps = 89/434 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
++ G G+ GQLG+G + E++ +VE L+ +V VV G +++ + +DG ++TWG N
Sbjct: 7 IIAWGSGEDGQLGIGTN-EEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG E +E IP V K Q + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 GLK------GEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP-EQGQL 204
G + G +++ P + + ++A+G H V+LT G++ T G P G +
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 183
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNN 260
+I VP++ + +++V +N + G +LA+G N
Sbjct: 184 KQIF-------------------VPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNE 224
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y QLG D++ P + L D +A+G HS AL +G++Y +GR ++
Sbjct: 225 YGQLGTGDTQPTSH-------PVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEH 277
Query: 321 GRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
GRLG N P + L ++ I ++CG S A+
Sbjct: 278 GRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL-------------------- 317
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDK------------T 424
+G+I++FGR D+GRLG +P+ P IP + +
Sbjct: 318 ------TRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWS 371
Query: 425 ITSIACGNCVSFAI 438
IACG + AI
Sbjct: 372 AKWIACGGRHTLAI 385
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 155/350 (44%), Gaps = 48/350 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G + T G G LG P+ + V+ L NV + +GG H + + + G+ Y WG
Sbjct: 57 GTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 95 CNDEGALGREAEGDSEFIP--QTVNLPKKAV------QISAGDSHSVALLEDGTVYAWGS 146
N+ G G E D P + + +PK+ Q++AG +HSV L +G V+ WG
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 147 FRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G+ Q P++++ + + IA GA H + L G LL G E GQLG
Sbjct: 177 PWPP-------GDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229
Query: 206 R-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
TQ ++ G+ L +D G ++T ++ KG + +G + +L
Sbjct: 230 TGDTQPTSHPVPVHGLDDL---------TLVDIAAGGWHSTALTDKGEVYGWGRGEHGRL 280
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D++ + P + L+++ ++ G HS+AL +G+I++FGR D+GRLG
Sbjct: 281 GFGDND-----KSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Query: 325 LKN---VSEPVTEPTPIPSLQDK------------TITSIACGNCVSFAI 359
+P+ P IP + + IACG + AI
Sbjct: 336 YGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAI 385
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 152/335 (45%), Gaps = 43/335 (12%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ S +++ G E GQLG T + LEP + V +G N+
Sbjct: 1 MVSATSIIAWGSGEDGQLGIGTNEEKEWACV--VEALEP-------YSVRSVVSGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I G++ +G N LG K+ N P +K+L++ K T A G H LA
Sbjct: 52 AICDDGTMFTWGWNQRGTLGHPPE--TKTENI----PSRVKALANVKITQAAIGGWHCLA 105
Query: 306 LNSEGKIYAFGRHDYGRLG---LKN-VSEPVTEPTPIPS--LQDKTITSIACGNCVSFAI 359
++ +G+ YA+G ++YG+ G LK+ + PV IP T+ +A G S +
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVL 165
Query: 360 DSEGVLYGWG-------------------MGNGYQLGNGKEDDI-LNSEGKIYAFGRHDY 399
EG ++ WG + N + G ++ L +G++ A+G ++Y
Sbjct: 166 TREGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G+LG + ++P + P P+ L D T+ IA G S A+ +G +YGWG G +LG G
Sbjct: 226 GQLGTGD-TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGD 284
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
D + + + L ++QV+ GG HSV L +
Sbjct: 285 NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTR 319
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 193/429 (44%), Gaps = 64/429 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG ++G LG + E+ L P + +G +S+A+ +DGT++ WG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW-- 64
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G++G E + P ++++++ I + A G H + + +G G E GQ G
Sbjct: 65 NQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 206 R-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
+ R RR + + L + + G ++ ++ +G + +G
Sbjct: 125 EEPLKDEMGRPVRRDIVIPKRCAPKLTVRQV--AAGGTHSVVLTREGHVWTWGQP----- 177
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
++++ F P ++ L + +++A G H+LAL +G++ A+G ++YG+LG
Sbjct: 178 -WPPGDIKQ-----IFVPVRVQGLEN--VSIIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ ++P + P P+ L D T+ IA G S A+ +G +YGW
Sbjct: 230 TGD-TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGW---------------- 272
Query: 385 LNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
GR ++GRLG N P + L ++ I ++CG S A+ +G
Sbjct: 273 ----------GRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGR 322
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKI-------EG-------KQLNNYTVLQVASGGQHS 489
++ +G G+ +LG G++ +P+++ EG ++ ++ +A GG+H+
Sbjct: 323 IFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHT 382
Query: 490 VILAKPKPN 498
+ + + K +
Sbjct: 383 LAIVEWKSD 391
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 172/355 (48%), Gaps = 39/355 (10%)
Query: 39 VLTCGQGDTGQLGLG----PDVME--RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+L G GQLGLG V+E R F L + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK---TVRDVGCGLRHTVFVLDDGTVYT 57
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
GCND G LG E S P+ V + V +S G++H++ L + G VYAWG D
Sbjct: 58 CGCNDLGQLGHEK---SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAAD- 113
Query: 151 HGSMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ--LG 205
G +GL G E + P ++S+S IV++A G H + L+ + + G + GQ LG
Sbjct: 114 -GQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
++ S + + + G++ G ++ ++ G++ +G N + QLG
Sbjct: 173 YDLKKQTSPQLIKSLLGIPFGQIAAG---------GAHSFALTLSGAVFGWGRNKFGQLG 223
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D + + P+L+KSL +K ++ G+ H+ AL EG ++ FG YG+LG
Sbjct: 224 LNDENDR-------YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 277 NSTGHEIN-PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 164/391 (41%), Gaps = 65/391 (16%)
Query: 144 WGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCP 199
WG+ S G +GL G E + P + + + G H V + G + T GC
Sbjct: 4 WGN--ASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
+ GQLG ++S R + G L ++I V G +T ++ KG + A+G
Sbjct: 62 DLGQLGH--EKSRKRPEQVG---------ALDAQNIVAVSCGEAHTLTLNDKGQVYAWGF 110
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
QLG +E P IKSLSD + +A G +HSLAL+ +++++G++
Sbjct: 111 AADGQLGLPGTEEYTR------VPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQN 164
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G+LGL + T P I SL IA G SFA+ G ++GWG QLG
Sbjct: 165 KHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Query: 379 GKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
E+D L EG ++ FG YG+LG + +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEIN 284
Query: 413 EPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P + L +T IACG S + S G +Y +G+G QLG G + P ++G
Sbjct: 285 -PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKG 343
Query: 472 KQL-------------NNYTVLQVASGGQHS 489
L Y V ++ SGG S
Sbjct: 344 NFLPFNGQIPLNSDRDEYYYVRRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 35/313 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ HG
Sbjct: 110 FAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGEGIQK--TPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+GL G ++K +P ++S+ GI +IA+G H LT G + G + GQLG
Sbjct: 168 QLGL-GYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH- 276
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+G+ P + L T +A G+ H+ A S G+IY+FG G+LG+
Sbjct: 277 ----NSTGHE--INPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Query: 327 NVSEPVTEPTPIP 339
+ S +P P
Sbjct: 331 STS---NRKSPFP 340
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG D+ ++ + L++ L + ++ GG H+ LT G V+ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D ++P + +K V IS G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLGR-I 207
G +G G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGS 331
Query: 208 TQRSASRNARRGMSFLEPGEVPL-----KRKHIDDVFTG 241
T S +G G++PL + ++ +F+G
Sbjct: 332 TSNRKSPFPVKGNFLPFNGQIPLNSDRDEYYYVRRIFSG 370
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +KT+ + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + ++ +G +Y WG QLG G E+ P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNI--KSLSDVQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 186/429 (43%), Gaps = 69/429 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV---NLPKK--------AVQISAGDSHSVALLED 138
V +GCND+G LG A+ V N PK+ V +S G H++AL
Sbjct: 12 VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVS----GIVKIASGADHFVMLTSRG 191
G VY+WG GSMG G G K+ P K+ + ++ G H +T+ G
Sbjct: 72 GAVYSWG-----WGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDG 126
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT-----GVYNTF 246
L G GQLG + A+ SF P + PL D+ G +
Sbjct: 127 TLYMWGETHWGQLGLPKEFEAAHE-----SF--PVKCPLLEGVADESVVKVSCGGTHTAA 179
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF---TPHLIKSLSDKKFTMLASGQHHS 303
+++ G + +G + QLG + ++ + + PHL++ + +K +A G HS
Sbjct: 180 LTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHS 239
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
A+ +G +Y +G+ DYG LG+ S+ T P + D ++CG
Sbjct: 240 AAVTEQGHVYIWGKEDYGMLGVGQTSDQQT-PKRVEFFDDIPALRVSCG----------- 287
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
GW ++ G YAFGR +YGRLGL + ++ T P + +L+ +
Sbjct: 288 ---GW------------HTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALKGQ 331
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
T+ ACG + + S+G+ Y G + +LG + P +++ L V QV+
Sbjct: 332 TVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD---LGPIPVRQVS 388
Query: 484 SGGQHSVIL 492
+GG HS+ L
Sbjct: 389 AGGAHSMAL 397
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 190/434 (43%), Gaps = 108/434 (24%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDL--------------DNVVEVVVGGMHTVC 83
V+ G D GQLG G +R+ ++D+ + +V V G HT+
Sbjct: 11 AVVAFGCNDDGQLGTG---AKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMA 67
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV----------QISAGDSHSV 133
LT G VY+WG G++G+ GD +++N+P+K +S G HS
Sbjct: 68 LTASGAVYSWGW---GSMGQLGHGDL----KSINVPQKIAFFEQEGLKVDYVSCGGCHSA 120
Query: 134 ALLEDGTVYAWGSFRDSH-GSMGLKGE---GIQKTPLK---LESVS--GIVKIASGADHF 184
A+ DGT+Y WG ++H G +GL E + P+K LE V+ +VK++ G H
Sbjct: 121 AVTNDGTLYMWG---ETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHT 177
Query: 185 VMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG- 241
LT+ G + G + GQL G + N G+S R H+ + F G
Sbjct: 178 AALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVS----------RPHLVEGFNGE 227
Query: 242 ---------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
++ ++ +G + +G +Y LG + Q+ TP ++ D
Sbjct: 228 KVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQ-------TPKRVEFFDDIP 280
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
++ G H++ + G YAFGR +YGRLGL + ++ T P + +L+ +T+ ACG
Sbjct: 281 ALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALKGQTVIQAACG 339
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+ + S+G+ Y GR D+GRLG+ ++ +P++
Sbjct: 340 GSHTLFVTSDGI--------------------------AYVAGRPDHGRLGMTDM-KPLS 372
Query: 413 EPT-----PIPSLQ 421
PT PIP Q
Sbjct: 373 VPTRLDLGPIPVRQ 386
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 161/338 (47%), Gaps = 49/338 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
T G V + G G GQLG G +V ++ F E L V V GG H+ +T DG
Sbjct: 69 TASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGL-KVDYVSCGGCHSAAVTNDGT 127
Query: 90 VYTWGCNDEGALG--REAEGDSEFIPQTVNL-----PKKAVQISAGDSHSVALLEDGTVY 142
+Y WG G LG +E E E P L + V++S G +H+ AL G VY
Sbjct: 128 LYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVY 187
Query: 143 AWGSFRDSHGSMGLKGEGIQKT----------PLKLESVSG--IVKIASGADHFVMLTSR 190
WG R G +G+ ++ T P +E +G +V++A GA H +T +
Sbjct: 188 VWG--RGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQ 245
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
G++ G + G LG + Q S + +R + F + ++P R V G ++T + +K
Sbjct: 246 GHVYIWGKEDYGMLG-VGQTSDQQTPKR-VEFFD--DIPALR-----VSCGGWHTMVVAK 296
Query: 251 -GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G AFG Y +LG D++ + PHL+K+L + A G H+L + S+
Sbjct: 297 SGDCYAFGRGEYGRLGLGDTKSRTR-------PHLVKALKGQTVIQAACGGSHTLFVTSD 349
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPT-----PIPSLQ 342
G Y GR D+GRLG+ ++ +P++ PT PIP Q
Sbjct: 350 GIAYVAGRPDHGRLGMTDM-KPLSVPTRLDLGPIPVRQ 386
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 53/295 (17%)
Query: 248 SSKGSILAFGLNNYSQLGEADSE-----VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+++ +++AFG N+ QLG + + F P + L ++ ++ G H
Sbjct: 7 ATECAVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNF--PKQLGGLLGEEIVAVSCGSRH 64
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK--TITSIACGNCVSFAID 360
++AL + G +Y++G G+LG ++ + + P I + + + ++CG C S A+
Sbjct: 65 TMALTASGAVYSWGWGSMGQLGHGDL-KSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVT 123
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDI--------------------------------LNSE 388
++G LY WG + QLG KE + L +
Sbjct: 124 NDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNL 183
Query: 389 GKIYAFGRHDYGRLG-----LKNVSEP----VTEPTPIPSLQDKTITSIACGNCVSFAID 439
G++Y +GR D G+LG LK+ + V+ P + + + +ACG S A+
Sbjct: 184 GRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVT 243
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G +Y WG + LG G+ D P ++E ++ L+V+ GG H++++AK
Sbjct: 244 EQGHVYIWGKEDYGMLGVGQTSDQQTPKRVE--FFDDIPALRVSCGGWHTMVVAK 296
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 172/355 (48%), Gaps = 39/355 (10%)
Query: 39 VLTCGQGDTGQLGLG----PDVME--RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+L G GQLGLG V+E R F L + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK---TVRDVGCGLRHTVFVLDDGTVYT 57
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
GCND G LG E S P+ V + V +S G++H++ L + G VYAWG D
Sbjct: 58 CGCNDLGQLGHEK---SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAAD- 113
Query: 151 HGSMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ--LG 205
G +GL G E + P ++S+S IV++A G H + L+ + + G + GQ LG
Sbjct: 114 -GQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
++ S + + + G++ G ++ ++ G++ +G N + QLG
Sbjct: 173 YDLKKQTSPQLIKSLLGIPFGQIAAG---------GAHSFALTLSGAVFGWGRNKFGQLG 223
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D + + P+L+KSL +K ++ G+ H+ AL EG ++ FG YG+LG
Sbjct: 224 LNDENDR-------YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ + P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 277 NSTGHEIN-PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 164/391 (41%), Gaps = 65/391 (16%)
Query: 144 WGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCP 199
WG+ S G +GL G E + P + + + G H V + G + T GC
Sbjct: 4 WGN--ASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
+ GQLG ++S R + G L ++I V G +T ++ KG + A+G
Sbjct: 62 DLGQLGH--EKSRKRPEQVG---------ALDAQNIVAVSCGEAHTLTLNDKGQVYAWGF 110
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
QLG +E P IKSLSD + +A G +HSLAL+ +++++G++
Sbjct: 111 AADGQLGLPGTEEYTR------VPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQN 164
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G+LGL + T P I SL IA G SFA+ G ++GWG QLG
Sbjct: 165 KHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Query: 379 GKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
E+D L EG ++ FG YG+LG + +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEIN 284
Query: 413 EPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P + L +T IACG S + S G +Y +G+G QLG G + P ++G
Sbjct: 285 -PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKG 343
Query: 472 KQL-------------NNYTVLQVASGGQHS 489
L Y V ++ SGG S
Sbjct: 344 NFLPFNGQIPLNSDRDEYYYVRRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 35/313 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ HG
Sbjct: 110 FAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWG--QNKHG 167
Query: 153 SMGLKGEGIQK--TPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+GL G ++K +P ++S+ GI +IA+G H LT G + G + GQLG
Sbjct: 168 QLGL-GYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL-- 224
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEA 267
N R + L+ L+ + I + G +T ++ +G + FG Y QLG
Sbjct: 225 ---NDENDRYVPNLLK----SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH- 276
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+G+ P + L T +A G+ H+ A S G+IY+FG G+LG+
Sbjct: 277 ----NSTGHE--INPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Query: 327 NVSEPVTEPTPIP 339
+ S +P P
Sbjct: 331 STS---NRKSPFP 340
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG D+ ++ + L++ L + ++ GG H+ LT G V+ W
Sbjct: 155 GSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG E D ++P + +K V IS G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDEND-RYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF-VMLTSRGNLLTAGCPEQGQLGR-I 207
G +G G + P K+ + G + +IA G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGS 331
Query: 208 TQRSASRNARRGMSFLEPGEVPL-----KRKHIDDVFTG 241
T S +G G++PL + ++ +F+G
Sbjct: 332 TSNRKSPFPVKGNFLPFNGQIPLNSDRDEYYYVRRIFSG 370
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +KT+ + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + ++ +G +Y WG QLG G E+ P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNI--KSLSDVQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 176/350 (50%), Gaps = 29/350 (8%)
Query: 39 VLTCGQGDTGQLGLGPDVM----ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+G ++ E + + + D NV EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHD-RNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N +G LG E+EG S+ P + V ++ G+SHSVAL + G V++WG+ D G +
Sbjct: 60 LNTKGQLGHESEG-SKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD--GQL 116
Query: 155 GLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E P ++ ++ I++I+ G H + L + G T G GQLG +
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP 176
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
+ + +R S +PL + V G ++F +S G++ +G N+ QLG +D
Sbjct: 177 SQASPQRVKSL---DGIPLAQ-----VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++++
Sbjct: 229 DRES-------PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
V P + L ++ IACG + A + S G++Y +G G QLG G
Sbjct: 282 EVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 61/367 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKR 232
+ ++A G +H V L G + T G +GQLG ++ S +P + L
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS------------KPEPIGALAG 83
Query: 233 KHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+HI V G ++ +S +G + ++G + QLG E + P LIK L+ +
Sbjct: 84 QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT------VPRLIKKLNQQ 137
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++ G H LAL ++G+ + +G++ YG+LGL P + SL + +A
Sbjct: 138 TILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAA 197
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G SFA+ G ++GWG + QLG E D +L
Sbjct: 198 GGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVL 444
G ++ FG G+LG ++++ V P + L ++ IACG + A + S G++
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGK------QLNN-------YTVLQVASGGQHSVI 491
Y +G G QLG G ++ P ++G QL+ + V + SGG + +
Sbjct: 317 YAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFV 376
Query: 492 LAKPKPN 498
L N
Sbjct: 377 LCSKYEN 383
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + ++V V G H+V L++ G+V++WG
Sbjct: 53 GEVYTCGLNTKGQLGHESEGSKPEPIGALAG-QHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 97 DEGALGREAEGDSEFIPQTV-NLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG D+ +P+ + L ++ + QIS G+ H +AL DG + WG ++S+G +
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWG--QNSYGQL 169
Query: 155 GLKGEG-IQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P +++S+ GI ++A+G H L+ G + G GQLG +R
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 230 RE----------SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+ EV P + L + + +A G+HH+LA S G IYAFG G+LG
Sbjct: 280 NDEV---------NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 327 NVSEPVTEPTPI 338
+ V P+P+
Sbjct: 331 HTCN-VKCPSPV 341
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 312 IYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+ G+ N+ + EP + D+ + +ACG S + +G +Y G+
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 371 GNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKN 406
QLG+ E L+ +G+++++G G+LGL
Sbjct: 61 NTKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+ + VT P I L +TI I+CGN A+ ++G + WG + QLG GKE
Sbjct: 121 IEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ K L+ + QVA+GG HS L+
Sbjct: 181 PQRV--KSLDGIPLAQVAAGGAHSFALS 206
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVM----ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+G ++ E + + + D NV EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHD-RNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E+EG P+ + + V ++ G+SHSVAL + G V++WG+ D G
Sbjct: 60 LNTKGQLGHESEGSK---PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD--G 114
Query: 153 SMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++I+ G H + L + G T G GQLG +
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G N+ QLG +D
Sbjct: 175 CPSQASPQRVKSL---DGIPLAQ-----VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 ERDRES-------PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L ++ IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ F+ G + GLN QLG +SE K P LI +L+ + +A G+
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGH-ESEGSK--------PELIGALAGQHIVHVACGE 93
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HS+AL+ +G+++++G G+LGL + + VT P I L +TI I+CGN A+
Sbjct: 94 SHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
++G + W G++ YG+LGL P + SL
Sbjct: 154 ADGQFFTW--------------------------GQNSYGQLGLGKECPSQASPQRVKSL 187
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+ +A G SFA+ G ++GWG + QLG E D P + K L + V+
Sbjct: 188 DGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV--KLLRSQKVV 245
Query: 481 QVASGGQHSVILAK 494
++ G +H+ +L K
Sbjct: 246 YISCGEEHTAVLTK 259
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 61/367 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKR 232
+ ++A G +H V L G + T G +GQLG ++ S +P + L
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS------------KPELIGALAG 83
Query: 233 KHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+HI V G ++ +S +G + ++G + QLG E + P LIK L+ +
Sbjct: 84 QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT------VPRLIKKLNQQ 137
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++ G H LAL ++G+ + +G++ YG+LGL P + SL + +A
Sbjct: 138 TILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAA 197
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G SFA+ G ++GWG + QLG E D +L
Sbjct: 198 GGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVL 444
G ++ FG G+LG ++++ V P + L ++ IACG + A + S G++
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGK------QLNN-------YTVLQVASGGQHSVI 491
Y +G G QLG G ++ P ++G QL+ + V + SGG + +
Sbjct: 317 YAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFV 376
Query: 492 LAKPKPN 498
L N
Sbjct: 377 LCSKYEN 383
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + ++V V G H+V L++ G+V++WG
Sbjct: 53 GEVYTCGLNTKGQLGHESEGSKPELIGALAG-QHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 97 DEGALGREAEGDSEFIPQTV-NLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG D+ +P+ + L ++ + QIS G+ H +AL DG + WG ++S+G +
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWG--QNSYGQL 169
Query: 155 GLKGEG-IQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P +++S+ GI ++A+G H L+ G + G GQLG +R
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 230 RE----------SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+ EV P + L + + +A G+HH+LA S G IYAFG G+LG
Sbjct: 280 NDEV---------NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 327 NVSEPVTEPTPI 338
+ V P+P+
Sbjct: 331 HTCN-VKCPSPV 341
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 312 IYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+ G+ N+ + EP + D+ + +ACG S + +G +Y G+
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 371 GNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKN 406
QLG+ E L+ +G+++++G G+LGL
Sbjct: 61 NTKGQLGHESEGSKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+ + VT P I L +TI I+CGN A+ ++G + WG + QLG GKE
Sbjct: 121 IEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ K L+ + QVA+GG HS L+
Sbjct: 181 PQRV--KSLDGIPLAQVAAGGAHSFALS 206
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 175/366 (47%), Gaps = 43/366 (11%)
Query: 22 VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHT 81
+ + A TL K G + + G+ + GQLG G + + + V+ L +++ + G H+
Sbjct: 42 IAAGAFHTLALKPDGSL-WSWGKNEYGQLGDGT-IKNKHSPVQVKHLSSIIVIDGGAWHS 99
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
+ L DG V+ WG N G LG + S IP + IS G H++AL DGTV
Sbjct: 100 IALKSDGTVWAWGGNWAGQLG-DGSYKSSNIPIKTKELSGIIAISCGGQHNLALKSDGTV 158
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+AWG + G +G+ Q+ P+++ ++ IV I++G H + + S G+L G
Sbjct: 159 WAWG--INDKGQLGIGDAKNQQIPIRIPGLNNIVAISAGGYHSLAIKSDGSLWAWGSNNM 216
Query: 202 GQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILA 255
QL G T R + P+ ++ D+ G ++ + S G+I+A
Sbjct: 217 EQLGDGSATNRCS----------------PVHVSNLRDIIAVNGGGDFSLALKSDGTIMA 260
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N SQLG+ + + TP + + D +A+ +HSLAL EGK++ F
Sbjct: 261 WGSNGLSQLGDGTTTNRN-------TPVNVSDVRD--IIEIAAKGNHSLALTIEGKVWEF 311
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGNG 373
G +G + VT P P L ++ + +IACG + + ++G L+ WG+ N
Sbjct: 312 -----GSIGATPTEKEVTLPAYRPVLVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNF 366
Query: 374 YQLGNG 379
QLG+G
Sbjct: 367 GQLGDG 372
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 63/378 (16%)
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
A +I+AG H++AL DG++++WG ++ +G +G + +P++++ +S I+ I GA
Sbjct: 39 APKIAAGAFHTLALKPDGSLWSWG--KNEYGQLGDGTIKNKHSPVQVKHLSSIIVIDGGA 96
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT- 240
H + L S G + G GQLG + +S++ +P+K K + +
Sbjct: 97 WHSIALKSDGTVWAWGGNWAGQLGDGSYKSSN--------------IPIKTKELSGIIAI 142
Query: 241 ---GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +N + S G++ A+G+N+ QLG D++ Q+ P I L++ ++
Sbjct: 143 SCGGQHNLALKSDGTVWAWGINDKGQLGIGDAKNQQ-------IPIRIPGLNN--IVAIS 193
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G +HSLA+ S+G ++A+G ++ +LG + + + P + +L+D I ++ G S
Sbjct: 194 AGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATNRCS-PVHVSNLRD--IIAVNGGGDFSL 250
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYA 393
A+ S+G + WG QLG+G + L EGK++
Sbjct: 251 ALKSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVSDVRDIIEIAAKGNHSLALTIEGKVWE 310
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT--ITSIACGNCVSFAIDSEGVLYGWGMGN 451
FG +G + VT P P L ++ + +IACG + + ++G L+ WG+ N
Sbjct: 311 FGS-----IGATPTEKEVTLPAYRPVLVNEITDVIAIACGEFHNVVLKNDGSLWVWGINN 365
Query: 452 GYQLGNGKEDDILEPMKI 469
QLG+G +P+ I
Sbjct: 366 FGQLGDGTVGSKTKPVLI 383
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 52/251 (20%)
Query: 278 CFFTPHLIKSLSDK-KFTM-----LASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNV 328
C L+ +L+ K F + +A+G H+LAL +G ++++G+++YG+LG +KN
Sbjct: 18 CLVVVFLVSTLAVKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNK 77
Query: 329 SEPVTEPTPIPSLQDKTITSIAC---GNCVSFAIDSEGVLYGWGMGNGYQLGNG--KEDD 383
PV Q K ++SI G S A+ S+G ++ WG QLG+G K +
Sbjct: 78 HSPV---------QVKHLSSIIVIDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSN 128
Query: 384 I----------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
I L S+G ++A+G +D G+LG+ + P IP L
Sbjct: 129 IPIKTKELSGIIAISCGGQHNLALKSDGTVWAWGINDKGQLGIGDAKNQQI-PIRIPGLN 187
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
+ I +I+ G S AI S+G L+ WG N QLG+G + P+ + N ++
Sbjct: 188 N--IVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVS----NLRDIIA 241
Query: 482 VASGGQHSVIL 492
V GG S+ L
Sbjct: 242 VNGGGDFSLAL 252
>gi|396081299|gb|AFN82917.1| alpha-tubulin suppressor-like protein [Encephalitozoon romaleae
SJ-2008]
Length = 359
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 166/362 (45%), Gaps = 36/362 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGCN 96
V G QLGLG D + D + +V G +HT+ L DG +Y+WGCN
Sbjct: 3 VFVFGSNAISQLGLGEDEGSTHVPTRLSFFDGLSPAKVRCGSLHTLILDSDGTLYSWGCN 62
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
DEGALGR+ + E P+ V L +K V + G S S AL G VY WG+FR ++G+ GL
Sbjct: 63 DEGALGRDGD---ESTPKKVCLREKVVDMDCGASISAALTSSGHVYVWGTFRSTNGAFGL 119
Query: 157 K-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
E I P+K+ + I +++G L + + T G E G+LGR R++ RN
Sbjct: 120 TPRESISFVPIKVP-LKNIRALSAGQSFIAALDLKDAIFTFGSNEFGELGR---RTSERN 175
Query: 216 ARRGMSFLEPGEVPLKRKHIDDV-FTGV---YNTFIS--SKGSILAFGLNNYSQLGEADS 269
R L P V RK + + F + N I+ + G +G N Y QLG +
Sbjct: 176 KLRA---LIPDAVTTPRKRLQNYRFKSIGCGLNHLIALNADGEAYCWGSNLYGQLGHDKA 232
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E F + + G++HSL + +G +Y GR+ G+LG+++ +
Sbjct: 233 EST-------FNKYKVPL---DGIVQAVGGENHSLFITRDGSLYGCGRNKEGQLGIQS-T 281
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
E + P + + + S N + LY WG G LG+ E++ L S
Sbjct: 282 ESIRSPVRLGLDGVEAVRSYNSFNICKIGNE----LYSWGTGFNGALGH--EEETLFSPK 335
Query: 390 KI 391
KI
Sbjct: 336 KI 337
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 49/275 (17%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ FG N SQLG + E G+T P + + G H+L L+S+G +
Sbjct: 3 VFVFGSNAISQLGLGEDE----GST--HVPTRLSFFDGLSPAKVRCGSLHTLILDSDGTL 56
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG--- 369
Y++G +D G LG E TP + + + CG +S A+ S G +Y WG
Sbjct: 57 YSWGCNDEGALGRDG-----DESTPKKVCLREKVVDMDCGASISAALTSSGHVYVWGTFR 111
Query: 370 ----------------------MGNGYQLGNGKED-DILNSEGKIYAFGRHDYGRLGLKN 406
+ N L G+ L+ + I+ FG +++G LG +
Sbjct: 112 STNGAFGLTPRESISFVPIKVPLKNIRALSAGQSFIAALDLKDAIFTFGSNEFGELGRRT 171
Query: 407 VSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
P TP LQ+ SI CG A++++G Y WG QLG+ K
Sbjct: 172 SERNKLRALIPDAVTTPRKRLQNYRFKSIGCGLNHLIALNADGEAYCWGSNLYGQLGHDK 231
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ K+ L+ ++Q G HS+ + +
Sbjct: 232 AESTFNKYKV---PLDG--IVQAVGGENHSLFITR 261
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 134/344 (38%), Gaps = 71/344 (20%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGC 198
V+ +GS S +G + EG P +L G+ K+ G+ H ++L S G L + GC
Sbjct: 3 VFVFGSNAISQLGLG-EDEGSTHVPTRLSFFDGLSPAKVRCGSLHTLILDSDGTLYSWGC 61
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
++G LGR S P +V L+ K +D + ++S G + +G
Sbjct: 62 NDEGALGRDGDEST------------PKKVCLREKVVDMDCGASISAALTSSGHVYVWG- 108
Query: 259 NNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD-----KKFTMLASGQHHSLALNSEGKI 312
+S N F TP S K L++GQ AL+ + I
Sbjct: 109 ------------TFRSTNGAFGLTPRESISFVPIKVPLKNIRALSAGQSFIAALDLKDAI 156
Query: 313 YAFGRHDYGRLGLKNVSE-------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ FG +++G LG + P TP LQ+ SI CG A
Sbjct: 157 FTFGSNEFGELGRRTSERNKLRALIPDAVTTPRKRLQNYRFKSIGCGLNHLIA------- 209
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
LN++G+ Y +G + YG+LG + +E +P D +
Sbjct: 210 -------------------LNADGEAYCWGSNLYGQLG-HDKAESTFNKYKVP--LDGIV 247
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
++ G S I +G LYG G QLG + I P+++
Sbjct: 248 QAVG-GENHSLFITRDGSLYGCGRNKEGQLGIQSTESIRSPVRL 290
>gi|392592753|gb|EIW82079.1| RCC1 BLIP-II [Coniophora puteana RWD-64-598 SS2]
Length = 423
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 161/350 (46%), Gaps = 53/350 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE--------GDSEFIPQTVNLPK----- 120
+ GG+HT+ + E G +++ G ND+ ALGR + G + + +P
Sbjct: 37 IAAGGLHTLFIDEKGTIWSCGVNDDAALGRVTKDVPDPNNPGSFLDVDRLTAVPHPLQSL 96
Query: 121 -----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--------GIQKTPLK 167
+AV+I+AGDS S A+ +G + WGSFR + GS+G GE I + P +
Sbjct: 97 VDEKFRAVRIAAGDSISAAISSEGELRVWGSFRAAEGSLGFSGETRLEFLPKAILELPHR 156
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
V++A+G +H ++LT+ G++ T G EQGQLGR RR + P +
Sbjct: 157 PGDYERAVQVAAGNNHLLVLTTHGHVYTWGAGEQGQLGRKILD------RRKIHGTNPEK 210
Query: 228 VPLKRKHIDDVF--TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
L + V TG Y +F + G + +GLN Q G SE KS + TP
Sbjct: 211 TALGVRSNKAVVIGTGNYCSFAVDEDGDVWGWGLNTMGQTGTGISE-PKSMSDDIGTPKT 269
Query: 285 IKSLSDKKF-----TMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-------KNVSEPV 332
I LS + +A G+HH+L L +G+++A GR D +LGL K P
Sbjct: 270 IPELSKEALGGDVVVEIAGGEHHTLFLTKQGRVFACGRCDGCQLGLTDDVPTYKERKNPD 329
Query: 333 TEPTP----IPSL-QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
TP P+ D I I+ G + AI G L+ WG +LG
Sbjct: 330 FFETPTEVKFPTKDDDDQIIHISAGTHNNMAITQGGALFAWGEETQGELG 379
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 165/399 (41%), Gaps = 84/399 (21%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV---- 228
G+ IA+G H + + +G + + G + LGR+T+ N SFL+ +
Sbjct: 33 GLEAIAAGGLHTLFIDEKGTIWSCGVNDDAALGRVTKDVPDPN--NPGSFLDVDRLTAVP 90
Query: 229 -PLKRKHIDDVFTGV-------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF- 279
PL+ +D+ F V + ISS+G + +G A+ + SG T
Sbjct: 91 HPLQ-SLVDEKFRAVRIAAGDSISAAISSEGELRVWG-----SFRAAEGSLGFSGETRLE 144
Query: 280 FTPHLIKSLSDK-----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NVS 329
F P I L + + +A+G +H L L + G +Y +G + G+LG K +
Sbjct: 145 FLPKAILELPHRPGDYERAVQVAAGNNHLLVLTTHGHVYTWGAGEQGQLGRKILDRRKIH 204
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------KEDD 383
E T + +K + I GN SFA+D +G ++GWG+ Q G G DD
Sbjct: 205 GTNPEKTALGVRSNKAVV-IGTGNYCSFAVDEDGDVWGWGLNTMGQTGTGISEPKSMSDD 263
Query: 384 I-------------------------------LNSEGKIYAFGRHDYGRLGL-------K 405
I L +G+++A GR D +LGL K
Sbjct: 264 IGTPKTIPELSKEALGGDVVVEIAGGEHHTLFLTKQGRVFACGRCDGCQLGLTDDVPTYK 323
Query: 406 NVSEPVTEPTP----IPSL-QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG--NG 458
P TP P+ D I I+ G + AI G L+ WG +LG +
Sbjct: 324 ERKNPDFFETPTEVKFPTKDDDDQIIHISAGTHNNMAITQGGALFAWGEETQGELGLKDL 383
Query: 459 KEDDILE-PMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
EDD +E P I ++ ++ + VA GGQH++ + + K
Sbjct: 384 PEDDKVETPSVIVRREGGSWKAIAVACGGQHTLGMFRKK 422
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 51/364 (14%)
Query: 37 GVVLTCGQGDTGQLGLG----PDVMERKTF--------------ALVEDLDNVVEVVVGG 78
G + +CG D LG PD +F +LV++ V + G
Sbjct: 51 GTIWSCGVNDDAALGRVTKDVPDPNNPGSFLDVDRLTAVPHPLQSLVDEKFRAVRIAAGD 110
Query: 79 MHTVCLTEDGKVYTWGC--NDEGALGREAEGDSEFIPQTV-NLP------KKAVQISAGD 129
+ ++ +G++ WG EG+LG E EF+P+ + LP ++AVQ++AG+
Sbjct: 111 SISAAISSEGELRVWGSFRAAEGSLGFSGETRLEFLPKAILELPHRPGDYERAVQVAAGN 170
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLK--------GEGIQKTPLKLESVSGIVKIASGA 181
+H + L G VY WG+ G +G K G +KT L + S +V I +G
Sbjct: 171 NHLLVLTTHGHVYTWGA--GEQGQLGRKILDRRKIHGTNPEKTALGVRSNKAVV-IGTGN 227
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGR-ITQ-RSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
+ G++ G GQ G I++ +S S + + E + L + ++
Sbjct: 228 YCSFAVDEDGDVWGWGLNTMGQTGTGISEPKSMSDDIGTPKTIPELSKEALGGDVVVEIA 287
Query: 240 TGVYNT-FISSKGSILAFGLNNYSQLGEADS--EVQKSGNTCFF-TPHLIKSLS---DKK 292
G ++T F++ +G + A G + QLG D ++ N FF TP +K + D +
Sbjct: 288 GGEHHTLFLTKQGRVFACGRCDGCQLGLTDDVPTYKERKNPDFFETPTEVKFPTKDDDDQ 347
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK----TITS 348
+++G H+++A+ G ++A+G G LGLK++ E TP ++ + +
Sbjct: 348 IIHISAGTHNNMAITQGGALFAWGEETQGELGLKDLPEDDKVETPSVIVRREGGSWKAIA 407
Query: 349 IACG 352
+ACG
Sbjct: 408 VACG 411
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPDV---MERKT-----------FALVEDLDNVVEVVVGGMHTV 82
G V CG+ D QLGL DV ERK F +D D ++ + G + +
Sbjct: 300 GRVFACGRCDGCQLGLTDDVPTYKERKNPDFFETPTEVKFPTKDDDDQIIHISAGTHNNM 359
Query: 83 CLTEDGKVYTWGCNDEGALGRE--AEGDSEFIPQTVNLPK----KAVQISAGDSHSVALL 136
+T+ G ++ WG +G LG + E D P + + KA+ ++ G H++ +
Sbjct: 360 AITQGGALFAWGEETQGELGLKDLPEDDKVETPSVIVRREGGSWKAIAVACGGQHTLGMF 419
Query: 137 EDGT 140
T
Sbjct: 420 RKKT 423
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 169/331 (51%), Gaps = 29/331 (8%)
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT 115
V E + + D +V EV GG H+V L EDG+VYT G N +G LG E EG+ P+
Sbjct: 69 VAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQ 124
Query: 116 VN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVS 172
+ + V ++ G+SHS+AL + G +++WG+ D G +GL E P ++ ++
Sbjct: 125 IGALADQNIVHVACGESHSLALSDRGQLFSWGAGSD--GQLGLMTTEDSVAVPRLIQKLN 182
Query: 173 --GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
I++++ G H + L + G T G GQLG + + + +R S +PL
Sbjct: 183 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL---EGIPL 239
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ V G ++F +S G++ A+G+NN QLG +D E ++S P +K L
Sbjct: 240 AQ-----VAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRES-------PCHVKLLR 287
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K ++ G+ H+ L G ++ FG G+LG ++++ V P + L +T I
Sbjct: 288 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQI 346
Query: 350 ACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
ACG + A + S G++Y +G G QLG G
Sbjct: 347 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 377
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 160/366 (43%), Gaps = 59/366 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ ++A G +H V L G + T G +GQLG +R ++ + G L +
Sbjct: 83 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIG---------ALADQ 131
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+I V G ++ +S +G + ++G + QLG +E + P LI+ L+ +
Sbjct: 132 NIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA------VPRLIQKLNQQT 185
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
++ G H LAL ++G+ + +G++ +G+LGL P + SL+ + +A G
Sbjct: 186 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 245
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILN 386
SFA+ G ++ WGM N QLG E+D +L
Sbjct: 246 GAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLY 445
G ++ FG G+LG ++++ V P + L +T IACG + A + S G++Y
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 364
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEG-------------KQLNNYTVLQVASGGQHSVIL 492
+G G QLG G ++ P ++G + + V Q+ SGG + +L
Sbjct: 365 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGGDQTFVL 424
Query: 493 AKPKPN 498
N
Sbjct: 425 CSKYEN 430
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 160/349 (45%), Gaps = 44/349 (12%)
Query: 9 LRKQAENPSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMER 59
LR P F++ +V + C GG G V TCG GQLG + +
Sbjct: 65 LRGIVAEPQVCGFISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP 122
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-L 118
+ + D N+V V G H++ L++ G++++WG +G LG DS +P+ + L
Sbjct: 123 EQIGALAD-QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 181
Query: 119 PKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI-- 174
++ + Q+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI
Sbjct: 182 NQQTILQVSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPL 239
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-K 233
++A+G H L+ G + G GQLG + P V L R +
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQ 289
Query: 234 HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSD 290
+ + G +T + +K G + FG + QLG + EV P + L
Sbjct: 290 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMG 340
Query: 291 KKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+ T +A G+ H+LA S G IYAFG G+LG + V P+P+
Sbjct: 341 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 388
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P + +SD+ +A G +HS+ L +G++Y G + G+LG + +P I +L
Sbjct: 72 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREG---NKPEQIGAL 128
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------ 383
D+ I +ACG S A+ G L+ WG G+ QLG +D
Sbjct: 129 ADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 188
Query: 384 ---------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
L ++G+ + +G++ +G+LGL P + SL+ + +A G
Sbjct: 189 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 248
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
SFA+ G ++ WGM N QLG E+D P + K L V+ ++ G +H+ +L K
Sbjct: 249 SFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHV--KLLRTQKVVYISCGEEHTAVLTK 306
>gi|367021210|ref|XP_003659890.1| hypothetical protein MYCTH_2297426 [Myceliophthora thermophila ATCC
42464]
gi|347007157|gb|AEO54645.1| hypothetical protein MYCTH_2297426 [Myceliophthora thermophila ATCC
42464]
Length = 520
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 175/403 (43%), Gaps = 69/403 (17%)
Query: 39 VLTCGQGDTGQLGLGPDV-----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+ G G+LGLGP V + + + VV+V +G MH V LT D K+ TW
Sbjct: 92 IYVLGANSGGELGLGPSVKSGNATKPRLNPYLSGPVGVVQVSLGAMHGVALTLDNKILTW 151
Query: 94 GCNDEGALGREAEGDSEFI-------------------------PQTVNL---PKKAV-- 123
G ND GALGR+ + + + P V++ P +
Sbjct: 152 GVNDHGALGRDTAWEDKLVDIDDDDRDDDDDSEDEGELNPKESTPTPVDMSAVPSDTIFT 211
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGAD 182
Q++A D+ + AL G VY WG+FR G + +Q P+ + V I+KI G++
Sbjct: 212 QVAATDNATFALTSTGRVYGWGTFRSEDGKLSFTPTVRVQSLPVLIHQVENIIKICCGSN 271
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF--- 239
H + LT+ G + T G GQLGR R + R + + + G +P K + D+
Sbjct: 272 HVMALTADGFVYTWGRGTDGQLGR-------RFSSRVVDWNKQGLIPQKVAGLKDIVEIG 324
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF----TPHLIKSLSD-KKF 293
+G ++F + G + +G NN Q+G D + F P L++SL +
Sbjct: 325 SGSNHSFAVDRAGRLFGWGFNNAGQIGVVDDAGEYESEYDFAITVPVPSLVQSLEGLPRI 384
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP--------------VTEPTPIP 339
+ G HS+A+ +G+ +GR GLK + P ++ PT +P
Sbjct: 385 KQITGGNFHSIAVTEDGRCLTWGRLYSFATGLKIDALPPQFVVLDSRGKPSFLSVPTAVP 444
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ +A + S A+ + +Y WG+ Q+G+ +E+
Sbjct: 445 GFP---ASFVAAASEHSLAVTVDEKIYTWGLNLTKQIGHKQEE 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 38/288 (13%)
Query: 44 QGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
+ + G+L P V + L+ ++N++++ G H + LT DG VYTWG +G LGR
Sbjct: 236 RSEDGKLSFTPTVRVQSLPVLIHQVENIIKICCGSNHVMALTADGFVYTWGRGTDGQLGR 295
Query: 104 EAEG------DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
IPQ V K V+I +G +HS A+ G ++ WG ++ G +G+
Sbjct: 296 RFSSRVVDWNKQGLIPQKVAGLKDIVEIGSGSNHSFAVDRAGRLFGWGF--NNAGQIGVV 353
Query: 158 GEG--------------IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + LE + I +I G H + +T G LT G
Sbjct: 354 DDAGEYESEYDFAITVPVPSLVQSLEGLPRIKQITGGNFHSIAVTEDGRCLTWGRLYSFA 413
Query: 204 LG----RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV---YNTFISSKGSILAF 256
G + + ++R SFL VP F ++ ++ I +
Sbjct: 414 TGLKIDALPPQFVVLDSRGKPSFL---SVPTAVPGFPASFVAAASEHSLAVTVDEKIYTW 470
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
GLN Q+G EV+ + TP S++DK+F + +G S+
Sbjct: 471 GLNLTKQIGHKQEEVEVA------TPITHDSVADKRFVWVGAGAQFSM 512
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 66/331 (19%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-----------RSASRNARRGMS 221
G+V+++ GA H V LT +LT G + G LGR T +
Sbjct: 128 GVVQVSLGAMHGVALTLDNKILTWGVNDHGALGRDTAWEDKLVDIDDDDRDDDDDSEDEG 187
Query: 222 FLEPGE---VPLKRKHI--DDVFTGVYNT-----FISSKGSILAFGLNNYSQLGEADSEV 271
L P E P+ + D +FT V T ++S G + +G
Sbjct: 188 ELNPKESTPTPVDMSAVPSDTIFTQVAATDNATFALTSTGRVYGWG------------TF 235
Query: 272 QKSGNTCFFTPHL-IKSL-----SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ FTP + ++SL + + G +H +AL ++G +Y +GR G+LG
Sbjct: 236 RSEDGKLSFTPTVRVQSLPVLIHQVENIIKICCGSNHVMALTADGFVYTWGRGTDGQLGR 295
Query: 326 KNVSEPVTE------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S V P + L+D I I G+ SFA+D G L+GWG N Q+G
Sbjct: 296 RFSSRVVDWNKQGLIPQKVAGLKD--IVEIGSGSNHSFAVDRAGRLFGWGFNNAGQIG-- 351
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-KTITSIACGNCVSFAI 438
+++ G+ + +D+ ++ PV P+ + SL+ I I GN S A+
Sbjct: 352 ----VVDDAGEYES--EYDFA------ITVPV--PSLVQSLEGLPRIKQITGGNFHSIAV 397
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+G W G Y G + D L P +
Sbjct: 398 TEDGRCLTW--GRLYSFATGLKIDALPPQFV 426
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 106/283 (37%), Gaps = 78/283 (27%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS-GQHHSLALNSEG 310
+I G N+ +LG S KSGN P L LS + S G H +AL +
Sbjct: 91 NIYVLGANSGGELGLGPS--VKSGNAT--KPRLNPYLSGPVGVVQVSLGAMHGVALTLDN 146
Query: 311 KIYAFGRHDYGRLGLKNVSE-------------------------PVTEPTPI-----PS 340
KI +G +D+G LG E + PTP+ PS
Sbjct: 147 KILTWGVNDHGALGRDTAWEDKLVDIDDDDRDDDDDSEDEGELNPKESTPTPVDMSAVPS 206
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
D T +A + +FA+ S G +YGWG R + G
Sbjct: 207 --DTIFTQVAATDNATFALTSTGRVYGWGTF------------------------RSEDG 240
Query: 401 RLGLKNVSEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+L P +P L Q + I I CG+ A+ ++G +Y WG G QLG
Sbjct: 241 KLSFT----PTVRVQSLPVLIHQVENIIKICCGSNHVMALTADGFVYTWGRGTDGQLGRR 296
Query: 459 KEDDILE-------PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+++ P K+ G + ++++ SG HS + +
Sbjct: 297 FSSRVVDWNKQGLIPQKVAGLK----DIVEIGSGSNHSFAVDR 335
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 185/421 (43%), Gaps = 67/421 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL-----PKKAVQISAGDSHSVALLEDGTVYAW 144
++++G N G L D P V+L K V ++ G+ + L E+G V+
Sbjct: 32 LFSFGQNTYGELALGDTNDRS-TPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90
Query: 145 GSFRDSHGSMGLKGEGIQKTP-LKLE---SVSGIVKIASG--ADHFVMLTSRGNLLTAGC 198
G ++G ++ P L+ S V++ SG ++H L + G L T G
Sbjct: 91 GYNDSGQCAIGTT----ERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGF 146
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFG 257
+GQLG T + + + +E L K + DV ++T + G + A G
Sbjct: 147 NMRGQLGLGTATTVTE-----ATLVEE----LAGKRVVDVACSYFHTAIVMDNGDLHACG 197
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N+Y QLG D SG+ P + +A GQH+++A +G + AFG+
Sbjct: 198 CNDYGQLGMGD----HSGH---LVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGK 250
Query: 318 HDYGRLGLKNVSEPVTEPTPI-PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+D+G+LGL VSEPV PT + P L + ++CG
Sbjct: 251 NDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGY----------------------- 287
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
I+ +G +Y FGR+DYG+LGL + + PTP+ SL IT +ACG +
Sbjct: 288 ---HHTAIVTEDGAVYTFGRNDYGQLGLGHKLH-MARPTPVESLSRMRITQVACGCYHTL 343
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA-KP 495
A+ +G ++ +G N QLG D L P I L N VA+G HSV L P
Sbjct: 344 ALSDDGKVFPFGRNNHGQLGLETSMDCLSPQLI--STLRNK---PVAAGFYHSVCLVGTP 398
Query: 496 K 496
K
Sbjct: 399 K 399
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 177/403 (43%), Gaps = 62/403 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-----FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+ + GQ G+L LG D +R T + D +VV+V G T L E+G V+T
Sbjct: 32 LFSFGQNTYGELALG-DTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGD--SHSVALLEDGTVYAWGSF 147
G ND G+ A G +E +P P V++ +G+ H AL +G +Y G
Sbjct: 91 GYNDS---GQCAIGTTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGF- 146
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ G +GL +E ++G +V +A H ++ G+L GC + GQLG
Sbjct: 147 -NMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLG 205
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQL 264
+ S R F R + V G + T S + G ++AFG N++ QL
Sbjct: 206 -MGDHSGHLVPRPVDYFF--------RHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + + L L L+ G HH+ + +G +Y FGR+DYG+LG
Sbjct: 257 G-----LDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLG 311
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
L + + PTP+ SL IT +ACG + A+ DD
Sbjct: 312 LGHKLH-MARPTPVESLSRMRITQVACGCYHTLAL---------------------SDD- 348
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
GK++ FGR+++G+LGL+ S P I +L++K + +
Sbjct: 349 ----GKVFPFGRNNHGQLGLET-SMDCLSPQLISTLRNKPVAA 386
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 27 VPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDV-MERKTFALVEDLD--NVVEVVV 76
VP L C T G V T G+ D GQLGLG + M R T VE L + +V
Sbjct: 280 VPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPT--PVESLSRMRITQVAC 337
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HT+ L++DGKV+ +G N+ G LG E D PQ ++ + ++AG HSV L+
Sbjct: 338 GCYHTLALSDDGKVFPFGRNNHGQLGLETSMDC-LSPQLISTLRNK-PVAAGFYHSVCLV 395
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S LE +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRS-LEG--IPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ V P + L +T IACG + A + S G++Y +G G QLG G ++
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 159/361 (44%), Gaps = 48/361 (13%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGC 198
+ WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 61 NTKGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G+
Sbjct: 110 AGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E D +L G ++ FG G+LG ++++ V
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++
Sbjct: 284 N-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 37/254 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ F+ G + GLN QLG ++ GN P I +L+D+ +A G+
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGH-----EREGNK----PEQIGALADQHIIHVACGE 93
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HSLAL+ G+++++G G+LGL + V P I L +TI ++CGN A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
++G + W G++ +G+LGL P + SL
Sbjct: 154 ADGQFFTW--------------------------GKNSHGQLGLGKEFPSQASPQRVRSL 187
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+ + +A G SFA+ G ++GWGM N QLG E D P + K L V+
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV--KLLRTQKVV 245
Query: 481 QVASGGQHSVILAK 494
++ G +H+ +L K
Sbjct: 246 YISCGEEHTAVLTK 259
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLA-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA + S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 312 IYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G G+ G+ N+ V EP + D+++ +ACG S + +G +Y G+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 371 GNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKN 406
QLG+ +E + L+ G+++++G G+LGL
Sbjct: 61 NTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+ V P I L +TI ++CGN A+ ++G + WG + QLG GKE
Sbjct: 121 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ + L + QVA+GG HS L+
Sbjct: 181 PQRV--RSLEGIPLAQVAAGGAHSFALS 206
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 184/410 (44%), Gaps = 64/410 (15%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAG 128
V + GG H++ + +DG WG N G LG D F+P V + A +SA
Sbjct: 443 VTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVD-RFLPGPVQVQGLTGATALSAT 501
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLT 188
H++AL +DGTV+ WG + DS G +G + ++ TP L ++G+ +ASG H + L
Sbjct: 502 AYHTLALAQDGTVWGWG-YNDS-GQLGDTVDMVRVTPAPLPGLTGVTALASGTYHSLALK 559
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-- 246
G + G GQLG T S R PG + DV +T+
Sbjct: 560 QDGTVWAWGLNNLGQLGDGTTVS------RTEQMPVPG--------LTDVTALAASTYHS 605
Query: 247 --ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ G++ +G N+ QLG+ + + TP + L+ + +A+G HSL
Sbjct: 606 LALKQDGTVWTWGYNSSGQLGDGTTASR-------LTPAQVPGLT--GVSAIAAGLVHSL 656
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +G ++A+GR+ G+LG V P P+ +++IA G+ S A+ +G
Sbjct: 657 ALKQDGTVWAWGRNTDGQLG---NGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGT 713
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ W GR+ G+LG + ++ + TP+
Sbjct: 714 AWSW--------------------------GRNGTGQLGNETITGSL---TPVQVQGLTA 744
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
+T++A G+ S A+ +G ++ WG +LG+G D P++++G L
Sbjct: 745 VTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQGLVL 794
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 163/345 (47%), Gaps = 35/345 (10%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
V+ L + HT+ L +DG V+ WG ND G LG + P +
Sbjct: 489 VQGLTGATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVD-MVRVTPAPLPGLTGVTA 547
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP-LKLESVSGIVKIASGADH 183
+++G HS+AL +DGTV+AWG ++ G +G G + +T + + ++ + +A+ H
Sbjct: 548 LASGTYHSLALKQDGTVWAWG--LNNLGQLG-DGTTVSRTEQMPVPGLTDVTALAASTYH 604
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-V 242
+ L G + T G GQLG T +ASR L P +VP + + G V
Sbjct: 605 SLALKQDGTVWTWGYNSSGQLGDGT--TASR--------LTPAQVP-GLTGVSAIAAGLV 653
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ + G++ A+G N QLG +P ++ + +A+G +H
Sbjct: 654 HSLALKQDGTVWAWGRNTDGQLGN---------GAAVNSPVPVQVQGLTGVSAIAAGSYH 704
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
SLAL +G +++GR+ G+LG + ++ + TP+ +T++A G+ S A+ +
Sbjct: 705 SLALKQDGTAWSWGRNGTGQLGNETITGSL---TPVQVQGLTAVTALAGGDAHSMALLRD 761
Query: 363 GVLYGWGMGNGYQLGNGKEDD---ILNSEGKIYAFGRHDYGRLGL 404
G ++ WG +LG+G D + +G + GRH RLGL
Sbjct: 762 GTVWTWGYNAEGELGDGTTLDRTAPVRVQGLVLEAGRH---RLGL 803
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 155/347 (44%), Gaps = 55/347 (15%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ IA+G H +++ G G GQLG T S R FL PG V ++
Sbjct: 443 VTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGT--SVDR-------FL-PGPVQVQGL 492
Query: 234 HIDDVFTG-VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ Y+T ++ G++ +G N+ QLG+ V+ TP + L+
Sbjct: 493 TGATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVR-------VTPAPLPGLT-- 543
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
T LASG +HSLAL +G ++A+G ++ G+LG + TE P+P L D +T++A
Sbjct: 544 GVTALASGTYHSLALKQDGTVWAWGLNNLGQLG-DGTTVSRTEQMPVPGLTD--VTALAA 600
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNS 387
S A+ +G ++ WG + QLG+G L
Sbjct: 601 STYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVSAIAAGLVHSLALKQ 660
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+G ++A+GR+ G+LG V P P+ +++IA G+ S A+ +G + W
Sbjct: 661 DGTVWAWGRNTDGQLG---NGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSW 717
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G QLGN L P++++G L T L A G HS+ L +
Sbjct: 718 GRNGTGQLGNETITGSLTPVQVQG--LTAVTAL--AGGDAHSMALLR 760
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G D+GQLG D M R T A + L V + G H++ L +DG V+ WG N
Sbjct: 512 GTVWGWGYNDSGQLGDTVD-MVRVTPAPLPGLTGVTALASGTYHSLALKQDGTVWAWGLN 570
Query: 97 DEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ G L GD + +T +P ++A HS+AL +DGTV+ WG +S G
Sbjct: 571 NLGQL-----GDGTTVSRTEQMPVPGLTDVTALAASTYHSLALKQDGTVWTWG--YNSSG 623
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G + TP ++ ++G+ IA+G H + L G + G GQLG
Sbjct: 624 QLGDGTTASRLTPAQVPGLTGVSAIAAGLVHSLALKQDGTVWAWGRNTDGQLG------- 676
Query: 213 SRNARRGMSFLEPGEVPLKRK---HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
G + P VP++ + + + G Y++ + G+ ++G N QLG
Sbjct: 677 -----NGAAVNSP--VPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNET 729
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
T TP ++ L+ T LA G HS+AL +G ++ +G + G LG
Sbjct: 730 I-------TGSLTPVQVQGLT--AVTALAGGDAHSMALLRDGTVWTWGYNAEGELG 776
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 42/260 (16%)
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ N L + S + + G C +P ++ T +A+G HSL + +G A+G
Sbjct: 416 VRNALGLSASASMILEGGTPCAPSP--------RRVTWIAAGGAHSLVVRQDGTADAWGH 467
Query: 318 HDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ YG+LG +V + P + L T S + ++ A D G ++GWG + QL
Sbjct: 468 NGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHTLALAQD--GTVWGWGYNDSGQL 525
Query: 377 GNGKE------------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
G+ + L +G ++A+G ++ G+LG + T
Sbjct: 526 GDTVDMVRVTPAPLPGLTGVTALASGTYHSLALKQDGTVWAWGLNNLGQLG-DGTTVSRT 584
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
E P+P L D +T++A S A+ +G ++ WG + QLG+G L P ++ G
Sbjct: 585 EQMPVPGLTD--VTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGL 642
Query: 473 QLNNYTVLQVASGGQHSVIL 492
V +A+G HS+ L
Sbjct: 643 T----GVSAIAAGLVHSLAL 658
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S LE +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRS-LEG--IPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ V P + L +T IACG + A + S G++Y +G G QLG G ++
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 170/396 (42%), Gaps = 61/396 (15%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGC 198
+ WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 61 NTKGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G+
Sbjct: 110 AGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E D +L G ++ FG G+LG ++++ V
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++
Sbjct: 284 N-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 471 G-------------KQLNNYTVLQVASGGQHSVILA 493
G + + V Q+ SGG + +L
Sbjct: 343 GYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLC 378
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLA-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA + S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + + +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--RIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
GCND G LG E P+ V + V +S G++H++AL + G VYAWG D
Sbjct: 59 GCNDLGQLGHEKARKR---PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD-- 113
Query: 152 GSMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL G E + P ++S+S IV++A G H + L+ + + G + GQLG
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY 173
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 174 EYKKQNSPHVIKSLL---GIPFAQIAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + P L+KSL +K + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 227 DNDR-------YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
S + P + L +T I CG + A + S G +Y +G+G QLG G
Sbjct: 280 SHEIN-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + I + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG +++ R G L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGH--EKARKRPEHVG---------ALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L QLG +E C P IKSLS+ + +A G +HSLAL+ +++++G+
Sbjct: 110 LATDGQLGLPGTE------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
++D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T I CG + A + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G L Y V ++ SGG S
Sbjct: 343 GNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG +R D N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG-HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ +G +
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWG--QNKYGQL 169
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P ++S+ GI +IA+G H +LT G + G + GQLG
Sbjct: 170 GLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + + + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDDNDRYVPTLLK----SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T + G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K+ + G H++ + +G +Y G +D G+LG + + P + +L + I ++
Sbjct: 33 NKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAV 89
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+CG + A LN +G++YA+G G+LGL E
Sbjct: 90 SCGEAHTLA--------------------------LNDKGQVYAWGLATDGQLGLPGTEE 123
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMK 468
+ P I SL + I +ACG S A+ ++ WG QLG G E P
Sbjct: 124 CIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHV 183
Query: 469 IEGKQLNNYTVLQVASGGQHSVILA 493
I K L Q+A+GG HS +L
Sbjct: 184 I--KSLLGIPFAQIAAGGAHSFVLT 206
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG + ++ + +++ L + ++ GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG + D ++P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDDND-RYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADH-FVMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +I G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K I + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L+ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI--KSLSEIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + + +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--RIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
GCND G LG E P+ V + V +S G++H++AL + G VYAWG D
Sbjct: 59 GCNDLGQLGHEKARKR---PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD-- 113
Query: 152 GSMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL G E + P ++S+S IV++A G H + L+ + + G + GQLG
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY 173
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 174 EYKKQNSPHVIKSLL---GIPFAQIAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + P L+KSL +K + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 227 DNDR-------YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
S + P + L +T I CG + A + S G +Y +G+G QLG G
Sbjct: 280 SHEIN-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + I + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG +++ R G L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGH--EKARKRPEHVG---------ALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L QLG +E C P IKSLS+ + +A G +HSLAL+ +++++G+
Sbjct: 110 LATDGQLGLPGTE------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
++D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T I CG + A + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G L Y V ++ SGG S
Sbjct: 343 GNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG +R D N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG-HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ +G +
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWG--QNKYGQL 169
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P ++S+ GI +IA+G H +LT G + G + GQLG
Sbjct: 170 GLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + + + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDDNDRYVPTLLK----SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T + G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K+ + G H++ + +G +Y G +D G+LG + + P + +L + I ++
Sbjct: 33 NKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAV 89
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+CG + A LN +G++YA+G G+LGL E
Sbjct: 90 SCGEAHTLA--------------------------LNDKGQVYAWGLATDGQLGLPGTEE 123
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMK 468
+ P I SL + I +ACG S A+ ++ WG QLG G E P
Sbjct: 124 CIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHV 183
Query: 469 IEGKQLNNYTVLQVASGGQHSVILA 493
I K L Q+A+GG HS +L
Sbjct: 184 I--KSLLGIPFAQIAAGGAHSFVLT 206
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG + ++ + +++ L + ++ GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG + D ++P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDDND-RYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADH-FVMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +I G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K I + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L+ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI--KSLSEIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + + +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--RIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
GCND G LG E P+ V + V +S G++H++AL + G VYAWG D
Sbjct: 59 GCNDLGQLGHEKARKR---PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD-- 113
Query: 152 GSMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL G E + P ++S+S IV++A G H + L+ + + G + GQLG
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY 173
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 174 EYKKQNSPHVIKSLL---GIPFAQIAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + P L+KSL +K + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 227 DNDR-------YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
S + P + L +T I CG + A + S G +Y +G+G QLG G
Sbjct: 280 SHEIN-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + I + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG +++ R G L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGH--EKARKRPEHVG---------ALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L QLG +E C P IKSLS+ + +A G +HSLAL+ +++++G+
Sbjct: 110 LATDGQLGLPGTE------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + P I SL IA G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
++D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T I CG + A + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G L Y V ++ SGG S
Sbjct: 343 GNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG +R D N+V V G HT+ L + G+VY WG
Sbjct: 53 GTVYTCGCNDLGQLG-HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V++WG ++ +G +
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWG--QNKYGQL 169
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P ++S+ GI +IA+G H +LT G + G + GQLG
Sbjct: 170 GLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + + + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDDNDRYVPTLLK----SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T + G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K+ + G H++ + +G +Y G +D G+LG + + P + +L + I ++
Sbjct: 33 NKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAV 89
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+CG + A LN +G++YA+G G+LGL E
Sbjct: 90 SCGEAHTLA--------------------------LNDKGQVYAWGLATDGQLGLPGTEE 123
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMK 468
+ P I SL + I +ACG S A+ ++ WG QLG G E P
Sbjct: 124 CIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHV 183
Query: 469 IEGKQLNNYTVLQVASGGQHSVILA 493
I K L Q+A+GG HS +L
Sbjct: 184 I--KSLLGIPFAQIAAGGAHSFVLT 206
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
G V + GQ GQLGLG + ++ + +++ L + ++ GG H+ LT G ++ W
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N G LG + D ++P + +K V I G+ H+ AL ++G V+ +G+ +
Sbjct: 215 GRNKFGQLGLNDDND-RYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGA--GGY 271
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADH-FVMLTSRGNLLTAGCPEQGQLG 205
G +G + P K+ + G + +I G H + S G + + G GQLG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K I + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ QLG G E+ I P I K L+ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI--KSLSEIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 167/349 (47%), Gaps = 37/349 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G GD GQLG G R T + + L++V++V G T+ L DG V+TWG N
Sbjct: 52 GEVYSWGYGDRGQLGNG-TWSARTTPVMAKGLNHVIDVHTGVRSTMALRSDGTVWTWGSN 110
Query: 97 DEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
+ G LG D Q L KAV G HS+AL EDG+V+ WG ++ +G +G
Sbjct: 111 ENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLG-YHSMALSEDGSVWTWG--KNDNGELG 167
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
Q TP+++ ++ + IA+G + L S G + G G+LG T
Sbjct: 168 NGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTTDR--- 224
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
VP++ + DV G ++ ++ G++ A+G N Y LG+
Sbjct: 225 -----------YVPVQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGT--- 270
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSE 330
T P IK+L + +A G +HSLAL+ G ++++G + +LG+ N S
Sbjct: 271 ----RTNRTRPVQIKNL--QHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASS 324
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P P+ ++ + IA G S A+ +G ++GWG G QLG+G
Sbjct: 325 LI--PVPVSGIEH--VREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDG 369
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 174/391 (44%), Gaps = 63/391 (16%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
++V G HT L G+VY+WG D G LG + P + + G +
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLG-NGTWSARTTPVMAKGLNHVIDVHTGVRST 95
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG-ADHFVMLTSRG 191
+AL DGTV+ WGS + +G +G+ P ++ +SGI ++ G H + L+ G
Sbjct: 96 MALRSDGTVWTWGS--NENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGYHSMALSEDG 153
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFI 247
++ T G + G+LG T + P++ ++DV G ++ +
Sbjct: 154 SVWTWGKNDNGELGNGTTLQQN--------------TPVQVAGLNDVTAIAAGGYFSLAL 199
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G++ A+G+N +LG+ + T + P + L+D +A+G HSLA+
Sbjct: 200 KSDGTVWAWGVNGDGELGDGTT-------TDRYVPVQVAGLTD--VMAIAAGGSHSLAVT 250
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++A+G++ YG LG T P I +LQ I ++A G S A+D G ++
Sbjct: 251 QDGTVWAWGKNTYGTLG-DGTRTNRTRPVQIKNLQH--IVAVAGGGYHSLALDRTGNVWS 307
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG + QLG G N S + P P+ ++ +
Sbjct: 308 WGDNSQRQLGVG-------------------------SNASSLI--PVPVSGIEH--VRE 338
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
IA G S A+ +G ++GWG G QLG+G
Sbjct: 339 IAAGGFHSVAMKKDGTVWGWGFNGGGQLGDG 369
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 154/344 (44%), Gaps = 54/344 (15%)
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
K+ +G H L S G + + G ++GQLG T + R + G H+
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSA------RTTPVMAKG-----LNHV 85
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
DV TGV +T + S G++ +G N QLG T P + LS K
Sbjct: 86 IDVHTGVRSTMALRSDGTVWTWGSNENGQLGIGTV-------TDMNVPGQVSGLSGIKAV 138
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
G +HS+AL+ +G ++ +G++D G LG + T P + L D +T+IA G
Sbjct: 139 SGGLG-YHSMALSEDGSVWTWGKNDNGELGNGTTLQQNT-PVQVAGLND--VTAIAAGGY 194
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGK 390
S A+ S+G ++ WG+ +LG+G D + +G
Sbjct: 195 FSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDVMAIAAGGSHSLAVTQDGT 254
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
++A+G++ YG LG T P I +LQ I ++A G S A+D G ++ WG
Sbjct: 255 VWAWGKNTYGTLG-DGTRTNRTRPVQIKNLQH--IVAVAGGGYHSLALDRTGNVWSWGDN 311
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ QLG G L P+ + G + V ++A+GG HSV + K
Sbjct: 312 SQRQLGVGSNASSLIPVPVSGIE----HVREIAAGGFHSVAMKK 351
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 183/423 (43%), Gaps = 69/423 (16%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
+ WG ND G LG DS P V LP ++AGD HSVAL GTV AWG
Sbjct: 55 AILAWGGNDGGQLGDGTTTDSSE-PIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWG- 112
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
R++ G +G P+ + SG IV +A GADH + LTS G+LL G + GQL
Sbjct: 113 -RNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQL 171
Query: 205 GRITQRSASRN-ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG--SILAFGLNNY 261
G + S+S A R + R H N +++ G ++LA+G N
Sbjct: 172 GDGSVTSSSTPVAVRLPPNTTVAAIAAGRDH---------NLVLTATGPAALLAWGANRE 222
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG+ + V +S P + + T +A G+ HSLAL S+ + A+G + +G
Sbjct: 223 GQLGDG-TVVDRS------RPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHG 275
Query: 322 RLGLKNVSE---PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+LG + PVT P+ T+IA G S A+ S+G WG + QLGN
Sbjct: 276 QLGDGTTTGSLLPVTVVLPV----GAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGN 331
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC-VSFA 437
G D SEPV P + SIA + + A
Sbjct: 332 GSTSD-----------------------SSEPVAVSLP----GGTRLISIASRDSDHNVA 364
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE---GKQLNNYTVLQVASGGQHSVILAK 494
I +EG WG+ + LG+G D P+ + G L + +A G HS+ L
Sbjct: 365 ITTEGAALAWGLNSQGHLGDGTTTDSATPVAVSLPAGAALTS-----IAVGDDHSLALPA 419
Query: 495 PKP 497
+P
Sbjct: 420 QQP 422
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 166/358 (46%), Gaps = 35/358 (9%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
+L G D GQLG G + A+ + V V G H+V LT G V WG N
Sbjct: 55 AILAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGRN 114
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
EG LG S P V+LP + V ++ G HS+AL G++ AWGS + G +
Sbjct: 115 TEGQLGNGTT-TSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSLLAWGS--NDTGQL 171
Query: 155 GLKGEGIQKTP--LKLESVSGIVKIASGADHFVMLTSRG--NLLTAGCPEQGQLGRITQR 210
G TP ++L + + IA+G DH ++LT+ G LL G +GQLG T
Sbjct: 172 GDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVV 231
Query: 211 SASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
SR N G++ + R H + ++S ++LA+G N++ QLG+
Sbjct: 232 DRSRPVPVNLPTGLTVT---AIAGGRDH---------SLALTSDDTVLAWGGNSHGQLGD 279
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ T P + + T +A+G+ HSLAL S+G A+G + +G+LG
Sbjct: 280 GTT-------TGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNG 332
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNC-VSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ S+ +EP + + SIA + + AI +EG WG+ + LG+G D
Sbjct: 333 STSD-SSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGHLGDGTTTD 389
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 29/338 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G VL G+ GQLG G + A+ + +V V VG H++ LT G +
Sbjct: 103 TSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSLLA 162
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDG--TVYAWGSFR 148
WG ND G LG + S P V LP I+AG H++ L G + AWG+ R
Sbjct: 163 WGSNDTGQLG-DGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANR 221
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+ G + + P+ L + + IA G DH + LTS +L G GQLG T
Sbjct: 222 EGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGT 281
Query: 209 QRSASRNARRGMSFLEPGEV--PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ L P V P+ + +++ ++S G+ LA+G N++ QLG
Sbjct: 282 TTGS----------LLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGN 331
Query: 267 ADSEVQKSGNTCFFTPHLIKSLS--DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+T + + SL + ++ + H++A+ +EG A+G + G LG
Sbjct: 332 --------GSTSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGHLG 383
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++ T P + +TSIA G+ S A+ ++
Sbjct: 384 DGTTTDSAT-PVAVSLPAGAALTSIAVGDDHSLALPAQ 420
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 YPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EEDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTG 330
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E+D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL K Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 178/395 (45%), Gaps = 63/395 (15%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
++V G HT L G+VY+WG D G LG + ++ P + I +G S
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLG-DGTWNTRTTPVMAKNLNHVIDIHSGVRSS 95
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG-ADHFVMLTSRG 191
+AL +DGTV+ WG+ + +G +G+ P ++ +SGI I+ G A H + L+ G
Sbjct: 96 MALRQDGTVWTWGA--NENGQLGIGTITNVNAPAQVPGLSGIKAISGGLAYHGMALSENG 153
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFI 247
+ T G + G+LG T + +N+ P+ + DV G Y+ +
Sbjct: 154 TVWTWGKNDNGELGNGT--TTQQNS------------PVLVAGLSDVTAIAAGGYYSLAL 199
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G++ A+G+N +LG+ + T P + L+D +A+G HSLA+
Sbjct: 200 KSDGTVWAWGVNGSGELGDGTT-------TERHVPVQVAGLTD--VMAIAAGGSHSLAIR 250
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++A+G + YG LG T P + +LQ I ++A G S A+D G ++
Sbjct: 251 QDGTVWAWGNNTYGTLG-DGTRTHRTRPVQVRNLQH--IVAVAGGGYHSLAVDQAGNVWS 307
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG + QLG +S + P+P + +
Sbjct: 308 WGDNSQQQLG-----------------------------LSSNASSLIPVPVTGIEHVRE 338
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
I+ G S A+ +G ++GWG +G QLG+G ++
Sbjct: 339 ISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNN 373
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 39/354 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G GD GQLG G R T + ++L++V+++ G ++ L +DG V+TWG N
Sbjct: 52 GEVYSWGYGDRGQLGDGT-WNTRTTPVMAKNLNHVIDIHSGVRSSMALRQDGTVWTWGAN 110
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS-HSVALLEDGTVYAWGSFRDSHGSMG 155
+ G LG + Q L IS G + H +AL E+GTV+ WG ++ +G +G
Sbjct: 111 ENGQLGIGTITNVNAPAQVPGLSGIKA-ISGGLAYHGMALSENGTVWTWG--KNDNGELG 167
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSAS 213
Q +P+ + +S + IA+G + + L S G + G G+L G T+R
Sbjct: 168 NGTTTQQNSPVLVAGLSDVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTTER--- 224
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADS 269
VP++ + DV G ++ I G++ A+G N Y LG+
Sbjct: 225 -------------HVPVQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGT- 270
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
T P +++L + +A G +HSLA++ G ++++G + +LGL S
Sbjct: 271 ------RTHRTRPVQVRNL--QHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGL---S 319
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ P+P + + I+ G S A+ +G ++GWG +G QLG+G ++
Sbjct: 320 SNASSLIPVPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNN 373
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 169/378 (44%), Gaps = 70/378 (18%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASG 180
++ AG H+ +L+ G VY+WG +G G G+G + TP+ ++++ ++ I SG
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWG-----YGDRGQLGDGTWNTRTTPVMAKNLNHVIDIHSG 91
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+ L G + T G E GQLG IT +A P +VP I +
Sbjct: 92 VRSSMALRQDGTVWTWGANENGQLGIGTITNVNA------------PAQVP-GLSGIKAI 138
Query: 239 FTGV--YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
G+ + +S G++ +G N+ +LG + Q S P L+ LSD T +
Sbjct: 139 SGGLAYHGMALSENGTVWTWGKNDNGELGNGTTTQQNS-------PVLVAGLSD--VTAI 189
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A+G ++SLAL S+G ++A+G + G LG +E P + L D + +IA G S
Sbjct: 190 AAGGYYSLALKSDGTVWAWGVNGSGELGDGTTTERHV-PVQVAGLTD--VMAIAAGGSHS 246
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
AI +G ++ WG + YG LG T P
Sbjct: 247 LAIRQDGTVWAWG--------------------------NNTYGTLG-DGTRTHRTRPVQ 279
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
+ +LQ I ++A G S A+D G ++ WG + QLG L P+ + G +
Sbjct: 280 VRNLQH--IVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGIE--- 334
Query: 477 YTVLQVASGGQHSVILAK 494
V ++++GG HSV + K
Sbjct: 335 -HVREISAGGFHSVAMKK 351
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 152/335 (45%), Gaps = 28/335 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM--HTVCLTEDGKVYTWG 94
G V T G + GQLG+G + A V L + + + GG+ H + L+E+G V+TWG
Sbjct: 102 GTVWTWGANENGQLGIGT-ITNVNAPAQVPGLSGI-KAISGGLAYHGMALSENGTVWTWG 159
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
ND G LG + P V I+AG +S+AL DGTV+AWG + G +
Sbjct: 160 KNDNGELGNGTT-TQQNSPVLVAGLSDVTAIAAGGYYSLALKSDGTVWAWGV--NGSGEL 216
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G + P+++ ++ ++ IA+G H + + G + G G LG T+ +R
Sbjct: 217 GDGTTTERHVPVQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTR 276
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
P +V +HI V G Y++ + G++ ++G N+ QLG
Sbjct: 277 ----------PVQVR-NLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLG-------L 318
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
S N P + + + +++G HS+A+ +G ++ +G + G+LG +
Sbjct: 319 SSNASSLIPVPVTGI--EHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRG 376
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
PT ++ D T G+ +I S+ V W
Sbjct: 377 IPTLTKAVLDTTSPDTGSGSLNPHSITSDSVALEW 411
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 2 THLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT 61
TH + V Q N V V +L G V + G QLGL +
Sbjct: 272 THRTRPV---QVRNLQHIVAVAGGGYHSLAVDQAGNV-WSWGDNSQQQLGLSSNASSLIP 327
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
V +++V E+ GG H+V + +DG V+ WG N G LG ++ IP L K
Sbjct: 328 VP-VTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGIP---TLTKA 383
Query: 122 AVQISAGDSHSVAL 135
+ ++ D+ S +L
Sbjct: 384 VLDTTSPDTGSGSL 397
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 211/477 (44%), Gaps = 87/477 (18%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQI 125
L V V G H++ L DG V+ WG N++G LG + D P V +P+ V++
Sbjct: 242 LKGVASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFTDR---PSPVQVPRLTGVVEV 298
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFV 185
+AG H++AL DGTV+AWG F S G +G + +P+++ ++G+V +A+G H V
Sbjct: 299 AAGQFHALALRLDGTVWAWG-FNGS-GQLGDGTTLSRSSPVQVPGLTGVVSVAAGDGHSV 356
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK----------RKHI 235
+ S G + T G GQLG +Q + + PG+ L +
Sbjct: 357 AVLSDGRVYTWGRNSAGQLGDGSQDA--------LPHPTPGQALLPFVCGNHRLEPEEQC 408
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGE---ADSEVQKSGNT-----CFFTPHLIKS 287
DD N+ S L + S G+ A +E GN C F L
Sbjct: 409 DD-----GNSINGDGCSALCLAESGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRL--- 460
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+ L +G +L ++GK++A+G + G+LG + +T P + + +
Sbjct: 461 ----ETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLT-PVSVSTASLTDVK 515
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-------------------------- 381
++A G S A+ S+G L+ WG + QLG ++
Sbjct: 516 NVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETH 575
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPV------TEPTPIPSLQDKTITSIACGNCVS 435
++ S GK+ A+G + YG++G P TEPT + S I +A G S
Sbjct: 576 SLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFS-----ILGVAAGQNHS 630
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
A+ S+G ++ WG N QLG+G D P+++ +LN V+ V +G HS+ L
Sbjct: 631 LALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQV--ARLNR--VVSVVAGLYHSLAL 683
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 178/399 (44%), Gaps = 58/399 (14%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDS 130
G +T+ +DG V+TWG N G LG + V+ V +++AG S
Sbjct: 41 RAAAGEAYTLIQRDDGSVWTWGANSGGQLG-DGTTAYRLASAPVDFSNGMVVKRVAAGGS 99
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF--VMLT 188
H++A+L D T++AWG R+ G +G+ +P+K+ +G+ +A A F +
Sbjct: 100 HALAVLSDKTLWAWG--RNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSAAVL 157
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-I 247
S G +LT G GQLG + S P EV I V G Y+ +
Sbjct: 158 SDGKVLTWGYNAYGQLGNGSTTDQS----------SPVEVS-ALSDIKGVSVGKYHMLAL 206
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S G++ A+G N Q + NT + TP L K +++G HSLAL
Sbjct: 207 RSGGTVWAWGFNGSGQ-----LGLGSGSNTQYNTPQQAAVL--KGVASVSAGDSHSLALR 259
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+G ++A+G+++ G+LG+ + ++ P+P+ + + +A G + A+ +G ++
Sbjct: 260 WDGTVWAWGQNNQGQLGIGSFTD---RPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWA 316
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG QLG+G + + P +P L + S
Sbjct: 317 WGFNGSGQLGDG---------------------------TTLSRSSPVQVPGL--TGVVS 347
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+A G+ S A+ S+G +Y WG + QLG+G +D + P
Sbjct: 348 VAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHP 386
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 165/356 (46%), Gaps = 36/356 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN---VVEVVVGGMHTVCLTEDGKVYTW 93
G V T G GQLG G + + D N V V GG H + + D ++ W
Sbjct: 56 GSVWTWGANSGGQLGDGTTAYRLASAPV--DFSNGMVVKRVAAGGSHALAVLSDKTLWAW 113
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKK----AVQISAGDSHSVALLEDGTVYAWGSFRD 149
G N +G LG + S F P V +P + V ++A +S A+L DG V WG +
Sbjct: 114 GRNGDGQLGVGST-TSSFSP--VKVPGRTGVEVVAMAASTFNSAAVLSDGKVLTWG--YN 168
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
++G +G Q +P+++ ++S I ++ G H + L S G + G GQLG +
Sbjct: 169 AYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSG 228
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ N + + L K + V G ++ + G++ A+G NN QLG
Sbjct: 229 SNTQYNTPQQAAVL---------KGVASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGS 279
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ S P + L+ +A+GQ H+LAL +G ++A+G + G+LG
Sbjct: 280 FTDRPS-------PVQVPRLT--GVVEVAAGQFHALALRLDGTVWAWGFNGSGQLG-DGT 329
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ + P +P L + S+A G+ S A+ S+G +Y WG + QLG+G +D +
Sbjct: 330 TLSRSSPVQVPGL--TGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDAL 383
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 39/368 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + G +GQLG V ++ L +V V GG H++ L DGK+++WG
Sbjct: 479 GKLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGS 538
Query: 96 NDEGALG--REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
N LG R+ G S P V+ V ++AG++HS+ +L +G V AWG +
Sbjct: 539 NSLSQLGVSRDTLG-SRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWG-----YNG 592
Query: 154 MGLKGEGIQ-------KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G G+G +P + ++ I+ +A+G +H + L S G + G GQLG
Sbjct: 593 YGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGD 652
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
+ +R P +V + + V G+Y++ + S G++ A+G N QLG
Sbjct: 653 GSLVDRTR----------PVQVA-RLNRVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLG 701
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ Q P + LS +A+G HSLAL ++G ++A+G + G++G
Sbjct: 702 DGTYFGQ-------MLPVQVPGLS--GVVAVAAGGRHSLALRADGTVWAWGYNSNGQIGD 752
Query: 326 KNVSEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + + P+P+ L + +A G+ S A+ S G + WG + QLG +
Sbjct: 753 GSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYATNNT 812
Query: 384 ILNSEGKI 391
++ G++
Sbjct: 813 DRSTPGEV 820
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 189/471 (40%), Gaps = 77/471 (16%)
Query: 37 GVVLTCGQGDTGQLGLG---------------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
G V T G+ GQLG G P V E D+ + G
Sbjct: 362 GRVYTWGRNSAGQLGDGSQDALPHPTPGQALLPFVCGNHRLEPEEQCDDGNSINGDGCSA 421
Query: 82 VCLTEDG--------KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV 133
+CL E G K C+D G GD + P+ + AG ++
Sbjct: 422 LCLAESGSSLCGDGIKAAAEACDD----GNLVNGDGCSFVCRLETPR----LVAGAKFTL 473
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRG 191
DG ++AWG + G +G + TP+ + S++ + +A+G H + L S G
Sbjct: 474 FQKNDGKLWAWG--HNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSDG 531
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
L + G QLG SR P V + ++ + S G
Sbjct: 532 KLWSWGSNSLSQLGVSRDTLGSR--------ASPALVSGVSGVVAVAAGETHSLVVLSNG 583
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ A+G N Y Q+G+ S V F+ + + +A+GQ+HSLAL S+G
Sbjct: 584 KVSAWGYNGYGQIGDGCSPVPT-----FYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++A+GR++ G+LG ++ V P+ + + S+ G S A+ S+G ++ WG
Sbjct: 639 VWAWGRNNSGQLGDGSL---VDRTRPVQVARLNRVVSVVAGLYHSLALRSDGTVWAWGDN 695
Query: 372 NGYQLGN------------------------GKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
QLG+ G+ L ++G ++A+G + G++G +
Sbjct: 696 GSGQLGDGTYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSD 755
Query: 408 SEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ + P+P+ L + +A G+ S A+ S G + WG + QLG
Sbjct: 756 ASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLG 806
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 200/491 (40%), Gaps = 94/491 (19%)
Query: 24 SEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN----VVEVVVGGM 79
S A+ L KT + G+ GQLG+G +F+ V+ VV +
Sbjct: 99 SHALAVLSDKT----LWAWGRNGDGQLGVGSTT---SSFSPVKVPGRTGVEVVAMAASTF 151
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
++ + DGKV TWG N G LG + D + P V+ +S G H +AL G
Sbjct: 152 NSAAVLSDGKVLTWGYNAYGQLGNGSTTD-QSSPVEVSALSDIKGVSVGKYHMLALRSGG 210
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
TV+AWG +G TP + + G+ +++G H + L G + G
Sbjct: 211 TVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQN 270
Query: 200 EQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
QGQL G T R + P +VP + + +V G ++ + G++ A+
Sbjct: 271 NQGQLGIGSFTDRPS------------PVQVP-RLTGVVEVAAGQFHALALRLDGTVWAW 317
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N QLG+ + + S P + L+ +A+G HS+A+ S+G++Y +G
Sbjct: 318 GFNGSGQLGDGTTLSRSS-------PVQVPGLT--GVVSVAAGDGHSVAVLSDGRVYTWG 368
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN-------------------CVSF 357
R+ G+LG + + PTP + + CGN C +
Sbjct: 369 RNSAGQLG-DGSQDALPHPTP-----GQALLPFVCGNHRLEPEEQCDDGNSINGDGCSAL 422
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDD--ILN--------------------------SEG 389
+ G G+G + DD ++N ++G
Sbjct: 423 CLAESGSSL---CGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVAGAKFTLFQKNDG 479
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
K++A+G + G+LG + +T P + + + ++A G S A+ S+G L+ WG
Sbjct: 480 KLWAWGHNFSGQLGDDSTVNRLT-PVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGS 538
Query: 450 GNGYQLGNGKE 460
+ QLG ++
Sbjct: 539 NSLSQLGVSRD 549
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 59/373 (15%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADH 183
+ +AG+++++ +DG+V+ WG+ G + P+ + + ++A+G H
Sbjct: 41 RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSH 100
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ + S L G GQLG + S+ P +VP R ++ V
Sbjct: 101 ALAVLSDKTLWAWGRNGDGQLGVGSTTSS----------FSPVKVP-GRTGVE-VVAMAA 148
Query: 244 NTFIS----SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+TF S S G +L +G N Y QLG + Q S P + +LSD K ++ G
Sbjct: 149 STFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSS-------PVEVSALSDIK--GVSVG 199
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
++H LAL S G ++A+G + TP + K + S++ G+ S A
Sbjct: 200 KYHMLALRSGGTVWAWG-FNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLA- 257
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
L +G ++A+G+++ G+LG+ + ++ P+P+
Sbjct: 258 -------------------------LRWDGTVWAWGQNNQGQLGIGSFTD---RPSPVQV 289
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
+ + +A G + A+ +G ++ WG QLG+G P+++ G V
Sbjct: 290 PRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQVPGLT----GV 345
Query: 480 LQVASGGQHSVIL 492
+ VA+G HSV +
Sbjct: 346 VSVAAGDGHSVAV 358
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G+ ++GQLG G +++R V L+ VV VV G H++ L DG V+ WG N
Sbjct: 637 GTVWAWGRNNSGQLGDG-SLVDRTRPVQVARLNRVVSVVAGLYHSLALRSDGTVWAWGDN 695
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + +P V V ++AG HS+AL DGTV+AWG +S+G +G
Sbjct: 696 GSGQLG-DGTYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGTVWAWG--YNSNGQIGD 752
Query: 157 KGEG---IQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+ + +P+K+ S ++ +A+G H V + S G + T G + GQLG
Sbjct: 753 GSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGY----- 807
Query: 212 ASRNARRGMSFLEPGEVPL 230
A+ N R PGEV L
Sbjct: 808 ATNNTDRST----PGEVTL 822
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPD--VMERKT--FALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V G GQ+G G D ++ R + L D V+ V G H+V + G+V T
Sbjct: 737 GTVWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRT 796
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLP 119
WG ND G LG P V LP
Sbjct: 797 WGQNDSGQLGYATNNTDRSTPGEVTLP 823
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 176/382 (46%), Gaps = 44/382 (11%)
Query: 23 TSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHT 81
+S ++ L C GVV + G+G+ GQLG G D T V VV G +T
Sbjct: 19 SSHSIALLDC----GVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYT 74
Query: 82 VCL-TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLE- 137
V + + G++Y+WG D G LG GD F+P+ + + +++ GD+H++ + +
Sbjct: 75 VAVASSRGQIYSWGWGDFGRLGHGECGDV-FVPRPIAFFSGRPVARVACGDTHTLVVTQG 133
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLT 195
DG +Y +G R+ +G +GL +P + ++ G + +A G++H + T G + +
Sbjct: 134 DGALYTFG--RNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFS 191
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSIL 254
G G LG + R V L + V G ++ ++ +G +
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTR---------VVGLDGVTVTSVVCGWRHSAVVTDEGRVF 242
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG + Y QLG D P L+ L + + +A G H++A +SEG +YA
Sbjct: 243 TFGWSKYGQLGHGDHVDHTR-------PCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYA 295
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQD------------KTITSIACGNCVSFAIDSE 362
+G + +G+LGL + SE PTP+ + + +ACG + A+
Sbjct: 296 WGWNKFGQLGLGD-SEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEA 354
Query: 363 GVLYGWGMGNGYQLGNGKEDDI 384
G +Y WG G QLG+G E D+
Sbjct: 355 GEVYSWGRGVNGQLGHGAEQDL 376
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 168/382 (43%), Gaps = 55/382 (14%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
+ + +S G SHS+ALL+ G V +WG D G + T + + +G+ + G
Sbjct: 11 RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCG 70
Query: 181 ADHFVML-TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
A++ V + +SRG + + G + G+LG R ++F P+ R D
Sbjct: 71 AEYTVAVASSRGQIYSWGWGDFGRLGH--GECGDVFVPRPIAFFSG--RPVARVACGDTH 126
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
T V G++ FG N QLG + N C +P L+ +L ++ + +A G
Sbjct: 127 TLV---VTQGDGALYTFGRNQNGQLGLGHT------NDCL-SPQLVTALQGERVSSVACG 176
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HSLA G ++++G YG LG + + T PT + L T+TS+ CG S +
Sbjct: 177 SEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYT-PTRVVGLDGVTVTSVVCGWRHSAVV 235
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYA 393
EG ++ +G QLG+G D +SEG +YA
Sbjct: 236 TDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYA 295
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQD------------KTITSIACGNCVSFAIDSE 441
+G + +G+LGL + SE PTP+ + + +ACG + A+
Sbjct: 296 WGWNKFGQLGLGD-SEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEA 354
Query: 442 GVLYGWGMGNGYQLGNGKEDDI 463
G +Y WG G QLG+G E D+
Sbjct: 355 GEVYSWGRGVNGQLGHGAEQDL 376
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 32/231 (13%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ + ++ G HS+AL G + ++GR + G+LG ++ T PT I +L D + ++
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLG-HGQADQCTSPTCIAALTDAGVDAV 67
Query: 350 ACGNCVSFAI-DSEGVLYGWGMGNGYQLGNGKEDDIL----------------------- 385
CG + A+ S G +Y WG G+ +LG+G+ D+
Sbjct: 68 VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHT 127
Query: 386 ----NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
+G +Y FGR+ G+LGL + ++ ++ P + +LQ + ++S+ACG+ S A
Sbjct: 128 LVVTQGDGALYTFGRNQNGQLGLGHTNDCLS-PQLVTALQGERVSSVACGSEHSLAATEA 186
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G ++ WG G LG+G D P ++ G L+ TV V G +HS ++
Sbjct: 187 GTVFSWGWGRYGNLGDGDSQDRYTPTRVVG--LDGVTVTSVVCGWRHSAVV 235
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
++ ++ G+ H + L G + + G E GQLG + P + L
Sbjct: 12 VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCT----------SPTCIAALTD 61
Query: 233 KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+D V G T SS+G I ++G ++ +LG + G+ F P I S
Sbjct: 62 AGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGEC-----GDV--FVPRPIAFFSG 114
Query: 291 KKFTMLASGQHHSLALNS-EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A G H+L + +G +Y FGR+ G+LGL + ++ ++ P + +LQ + ++S+
Sbjct: 115 RPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLS-PQLVTALQGERVSSV 173
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
ACG+ S A G ++ WG G LG+G D
Sbjct: 174 ACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYT----------------------- 210
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
PT + L T+TS+ CG S + EG ++ +G QLG+G D P +
Sbjct: 211 ----PTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLV 266
Query: 470 EGKQLNNYTVLQVASGGQHSV 490
G L + V VA G +H++
Sbjct: 267 AG--LQHCRVSTVAGGWRHTM 285
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------ 383
++ + ++CG+ S A+ GV+ WG G QLG+G+ D
Sbjct: 8 EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67
Query: 384 ---------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
+ +S G+IY++G D+GRLG + V P PI + + +ACG+
Sbjct: 68 VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGD-VFVPRPIAFFSGRPVARVACGDTH 126
Query: 435 SFAI-DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ + +G LY +G QLG G +D L P + L V VA G +HS+
Sbjct: 127 TLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLV--TALQGERVSSVACGSEHSL 181
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
++ + ++CG+ S A+ GV+ WG G QLG+G+ D P I L + V
Sbjct: 8 EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCI--AALTDAGVD 65
Query: 481 QVASGGQHSVILAKPK 496
V G +++V +A +
Sbjct: 66 AVVCGAEYTVAVASSR 81
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 80 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 138
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 139 LNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 193
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 194 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 253
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 254 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 305
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 306 EEDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 358
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 359 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 409
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 173/402 (43%), Gaps = 61/402 (15%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
T+ WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 79 TMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 138
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+GQLG +R ++ + G L +HI V G ++ +S +G + ++
Sbjct: 139 LNTKGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDRGQLFSW 187
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G
Sbjct: 188 GAGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 241
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ +G+LGL P + SL+ + +A G SFA+ G ++GWGM N QL
Sbjct: 242 KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 301
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E+D +L G ++ FG G+LG ++++
Sbjct: 302 GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 361
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G++Y +G G QLG G ++ P +
Sbjct: 362 VN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 420
Query: 470 EG-------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+G + + V Q+ SGG + +L N
Sbjct: 421 KGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 462
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 109 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 165
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 166 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 225
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 226 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 283
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 284 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQKVVYISCGEEHT 333
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 334 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 384
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 385 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQDKTITSIA 350
+ LASG L+S + +G G+ G+ N+ V EP + D+++ +A
Sbjct: 66 RLWTLASG------LDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVA 119
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILN 386
CG S + +G +Y G+ QLG+ +E + L+
Sbjct: 120 CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALS 179
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
G+++++G G+LGL + V P I L +TI ++CGN A+ ++G +
Sbjct: 180 DRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFT 239
Query: 447 WGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
WG + QLG GKE P ++ + L + QVA+GG HS L+
Sbjct: 240 WGKNSHGQLGLGKEFPSQASPQRV--RSLEGIPLAQVAAGGAHSFALS 285
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 179/418 (42%), Gaps = 65/418 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKVYTW 93
G+ L G+ G LG+G ++ K + L + +V G +H++ LT G V W
Sbjct: 63 GIGLAWGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAW 122
Query: 94 GCNDEGALGREAEGDSE-----FIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
G N G LG + D+ ++P V+LP ++A ++S+AL GTV AWG+
Sbjct: 123 GTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGN 182
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G + PL L + + I IA+ +H + LTS G +L G GQLG
Sbjct: 183 NDQGQLGNGTNTDSYLPVPLALPAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLG- 241
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ N+ ++ +P G ++ ++S G++L +G +
Sbjct: 242 ---NGNTTNSNTPVTV----ALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDT------ 288
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-- 324
P I + T +ASG HSLAL S GK++ +G + +G LG
Sbjct: 289 -------------VLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNG 335
Query: 325 -LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
N S PV P +P+ D TIT+IA GN S A+ S G L WG N Q+GNG
Sbjct: 336 TFANSSVPV--PASVPT--DTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTR-- 389
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
G G V+ P P+ D IT++A G S A+ +E
Sbjct: 390 ----TGSWPGMG---------------VSVPVPVSLAADTKITTMAGGYYHSLAVAAE 428
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 170/368 (46%), Gaps = 47/368 (12%)
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSG-- 173
LP A +A S A G AWG RD +G++G+ + + +P+++ +G
Sbjct: 44 LPTLAQHAAAATPPSGA--ATGIGLAWG--RDGYGALGVGTATLDDKLSPVRVHLPTGTT 99
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG-EVPLKR 232
I +A+GA H + LTS G +L G G LG T+ + N+ + S++ +P
Sbjct: 100 ISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTK---TDNSAQNDSYVPAAVHLPAGT 156
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ Y+ +++ G++LA+G N+ QLG NT + P + +
Sbjct: 157 TVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGT-------NTDSYLPVPLALPAATT 209
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSI 349
T +A+ +H LAL S G + A+G + G+LG N + PVT P TIT+I
Sbjct: 210 ITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALP----AGTTITAI 265
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQL-------------GNGKEDDI-LNSEGKIYAFG 395
A S A+ S G + WG + +G + + L S GK++ +G
Sbjct: 266 AAAGSHSMALTSTGTVLTWGQDTVLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWG 325
Query: 396 RHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+ +G LG N S PV P +P+ D TIT+IA GN S A+ S G L WG N
Sbjct: 326 ANYFGSLGNGTFANSSVPV--PASVPT--DTTITAIAGGNAQSLALTSTGKLLAWGRNNY 381
Query: 453 YQLGNGKE 460
Q+GNG
Sbjct: 382 GQVGNGTR 389
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 151/388 (38%), Gaps = 46/388 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G VL G D GQLG G + L + + + H + LT +G V
Sbjct: 172 TATGTVLAWGNNDQGQLGNGTNTDSYLPVPLALPAATTITAIAAATNHGLALTSNGTVLA 231
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N G LG +S P TV LP I+A SHS+AL GTV WG
Sbjct: 232 WGSNGSGQLGNGNTTNSN-TPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQ---- 286
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+ + P+ + I +ASG DH + LTS G + T G G LG T
Sbjct: 287 --------DTVLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFA 338
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
++ S P VP + ++S G +LA+G NNY Q+G
Sbjct: 339 NS--------SVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRT 390
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
G P + +D K T +A G +HSLA+ +E R + L+ +
Sbjct: 391 GSWPG-MGVSVPVPVSLAADTKITTMAGGYYHSLAVAAE-------RAPTSTIALR--AS 440
Query: 331 PVTEPTPIPSLQDKTITSIA--CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN-- 386
P T T P T+T A V+F +D+ L GN G+ L
Sbjct: 441 PSTPDTTQPVTLTATVTCTAGTPTGTVTF-LDASNTL-----GNATLSGSTTATASLTSG 494
Query: 387 --SEGKIYAFGRHDYGRLGLKNVSEPVT 412
S G GR+D L SEP+T
Sbjct: 495 SLSPGGHAITGRYDGNDLCPGQQSEPLT 522
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKI----YAFGRHDYGRLGLKNVS-----EPVTEPTP 337
+L+D T+ QH + A G A+GR YG LG+ + PV P
Sbjct: 39 ALTDPLPTL---AQHAAAATPPSGAATGIGLAWGRDGYGALGVGTATLDDKLSPVRVHLP 95
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWG------MGNGYQLGNGKEDD-------- 383
TI+ +A G S A+ S G + WG +GNG + N ++D
Sbjct: 96 ----TGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVH 151
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKT 424
L + G + A+G +D G+LG N + P +P+ T
Sbjct: 152 LPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLPVPLALPAATTIT 211
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
+ A + A+ S G + WG QLGNG + P+ + T+ +A+
Sbjct: 212 AIAAATNH--GLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPA--GTTITAIAA 267
Query: 485 GGQHSVIL 492
G HS+ L
Sbjct: 268 AGSHSMAL 275
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EEDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E+D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARSDRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EEDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E+D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 181/357 (50%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNSKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG + +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG-LGK 173
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
S+ + + + LE +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 174 EFPSQTSPQRVRSLEG--IPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ V P + L +T IACG + A + S G++Y +G G QLG G ++
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 170/401 (42%), Gaps = 61/401 (15%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGC 198
+ WG + + GI P VS I ++A G +H V L G + T G
Sbjct: 1 MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 61 NSKGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDRGQLFSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G+
Sbjct: 110 AGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E D +L G ++ FG G+LG ++++ V
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++
Sbjct: 284 N-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 471 G-------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
G + V Q+ SGG + +L N
Sbjct: 343 GYWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 44/349 (12%)
Query: 9 LRKQAENPSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMER 59
LR P FV+ ++ + C GG G V TCG GQLG + +
Sbjct: 18 LRGIVAEPQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP 75
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-L 118
+ + D ++V V G H++ L++ G++++WG +G LG DS +P+ + L
Sbjct: 76 EQIGALAD-QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 119 PKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI-- 174
++ + Q+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPL 192
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-K 233
++A+G H L+ G + G GQLG ++ P V L R +
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQ 242
Query: 234 HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSD 290
+ + G +T + +K G + FG + QLG + EV P + L
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---------NPRRVLELMG 293
Query: 291 KKFTMLASGQHHSLA-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+ T +A G+ H+LA + S G IYAFG G+LG + V P+P+
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 172/415 (41%), Gaps = 59/415 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
V WG N G LG + + P TV LP ++AG SHS+AL + G V AWGS
Sbjct: 58 TVLAWGDNFSGQLG-DGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGS 116
Query: 147 FRDSHGSMGLKGEGIQKTPLK--LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+S G +G + TP+ L + + I +A+G H + LT G +L G GQL
Sbjct: 117 --NSRGQLGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQL 174
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
G T + S G+ I + Y+ ++ G+ LA+G N+ QL
Sbjct: 175 GDGTTTARSTPVTVGLP---------AGTTITALAASTYSLALTDTGAALAWGSNSRGQL 225
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ + + TP + + T LA+ HSLAL G + A+G + G+LG
Sbjct: 226 GDGTTTDRS-------TPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLG 278
Query: 325 ---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
N S PVT P TIT++A G + + S G + WG + QLG+G
Sbjct: 279 DGTTTNRSTPVTVGLP----AGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTT 334
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
D S PVT P TIT++A G S A+
Sbjct: 335 TD-----------------------RSTPVTVGLP----AGTTITALAAGYYHSLALTDT 367
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G + WG + QLG+G D P+ + TVL S H + L P
Sbjct: 368 GAVLAWGGNSYGQLGDGTTTDRSTPVTVGLPAGTTITVL--VSMDNHGMALVAPP 420
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 158/358 (44%), Gaps = 41/358 (11%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALV--EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
VL G +GQLG G R T V + + GG H++ LT+ G V WG N
Sbjct: 59 VLAWGDNFSGQLGDG-TTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSN 117
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG D P TV LP ++AG HS+AL + G V AWGS +S+G +
Sbjct: 118 SRGQLGDGTTTD-RSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGS--NSNGQL 174
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVM-LTSRGNLLTAGCPEQGQL--GRITQRS 211
G + TP+ + +G A A + + LT G L G +GQL G T RS
Sbjct: 175 GDGTTTARSTPVTVGLPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTDRS 234
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN--TFISSKGSILAFGLNNYSQLGEADS 269
P V L Y+ ++ G++LA+G N+ QLG+ +
Sbjct: 235 ------------TPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTT 282
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LK 326
+ TP + + T LA+G+ H+L L S G + A+G + G+LG
Sbjct: 283 TNRS-------TPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTT 335
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDD 383
+ S PVT P TIT++A G S A+ G + WG GN Y QLG+G D
Sbjct: 336 DRSTPVTVGLP----AGTTITALAAGYYHSLALTDTGAVLAWG-GNSYGQLGDGTTTD 388
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 140/306 (45%), Gaps = 29/306 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALV--EDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
GVVL G GQLG G +R T V + + G H++ LT+ G V WG
Sbjct: 109 GVVLAWGSNSRGQLGDG-TTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWG 167
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
N G LG + + P TV LP + A ++S+AL + G AWGS +S G
Sbjct: 168 SNSNGQLG-DGTTTARSTPVTVGLPAGTTITALAASTYSLALTDTGAALAWGS--NSRGQ 224
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + TP+ + +G I +A+ DH + LT G +L G GQLG T +
Sbjct: 225 LGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTN 284
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSE 270
S G+ I + G +T + +S G++LA+G N+ QLG+ +
Sbjct: 285 RSTPVTVGLP---------AGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTT 335
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKN 327
+ TP + + T LA+G +HSLAL G + A+G + YG+LG +
Sbjct: 336 DRS-------TPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTD 388
Query: 328 VSEPVT 333
S PVT
Sbjct: 389 RSTPVT 394
>gi|170575713|ref|XP_001893354.1| regulator of chromosome condensation [Brugia malayi]
gi|158600702|gb|EDP37811.1| regulator of chromosome condensation, putative [Brugia malayi]
Length = 554
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 188/392 (47%), Gaps = 47/392 (11%)
Query: 27 VPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL--VEDLDNVVEVVVGGMHTVCL 84
+PT K G VL+CG+G+ QLG RK A+ + + +V+V+ GG+H++ L
Sbjct: 137 LPTEK----GDRVLSCGEGE--QLGHPGRSTTRKPRAISTLPEEKLIVQVIAGGVHSLVL 190
Query: 85 TEDGKVYTWGCNDEGAL---GREAEGDSE------FIPQTVNLPKKAVQISAGDSHSVAL 135
EDG VY G N++G + G E EG S+ F + K V ++AG S S AL
Sbjct: 191 MEDGTVYGCGINEKGTMPAEGVEPEGSSDKLAPIKFSDLLIQRHGKVVMLTAGASFSAAL 250
Query: 136 LEDGTVYAWGSFR------DSHGSMGLKGEGIQKTPLKL--ESVSGIVKIASGADHFVML 187
+ G+V AWG+ R +SH ++ ++K P+ + IVKIA+G +H VML
Sbjct: 251 TDKGSVIAWGNLRGMSGCIESHETL----LEMEKQPVVIVQHHQKVIVKIAAGENHLVML 306
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL------KRKHI--DDVF 239
T G +LT G GQLGR ++ S R+ R M P + + K+K + D++
Sbjct: 307 TESGEVLTFGDGSVGQLGRCSRVSHIRSQR--MVNDSPDSLRISVYDKGKKKLVLFDNIM 364
Query: 240 TGVYNTFISS-KGSILAFGLNNYSQLGEADSEV--QKSGNTCFFTPHLIKSLSDKKFTML 296
G + T S G I GLNN+ QLG + + H IK+ + + T++
Sbjct: 365 AGGFWTAARSIDGVIYVCGLNNFGQLGVPTPKALEDEDDEPELKIMHPIKASAFESTTVV 424
Query: 297 A-SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD----KTITSIAC 351
SG H +ALN++G++Y G++ LGL S + LQ + I I+
Sbjct: 425 ELSGIQHIIALNTQGEVYGIGKNTDNALGLGTWSGKEDDHWKYSELQKIDVPEQIKGISA 484
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S G Y WG + QLG G +DD
Sbjct: 485 SLGCSIVWTDSGNAYSWGYDSSGQLGLGIKDD 516
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 173/418 (41%), Gaps = 83/418 (19%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM---GLKGEG-------IQKTPLKLE 169
K VQ+ AG HS+ L+EDGTVY G + G+M G++ EG I+ + L ++
Sbjct: 175 KLIVQVIAGGVHSLVLMEDGTVYGCGI--NEKGTMPAEGVEPEGSSDKLAPIKFSDLLIQ 232
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V + +GA LT +G+++ G R S + LE + P
Sbjct: 233 RHGKVVMLTAGASFSAALTDKGSVIAWG----------NLRGMSGCIESHETLLEMEKQP 282
Query: 230 LK-RKHIDDVFTGV-----YNTFISSKGSILAFGLNNYSQLGEADSEVQ-KSGNTCFFTP 282
+ +H V + + ++ G +L FG + QLG +S +P
Sbjct: 283 VVIVQHHQKVIVKIAAGENHLVMLTESGEVLTFGDGSVGQLGRCSRVSHIRSQRMVNDSP 342
Query: 283 HLIK-SLSDK------KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS------ 329
++ S+ DK F + +G + A + +G IY G +++G+LG+
Sbjct: 343 DSLRISVYDKGKKKLVLFDNIMAGGFWTAARSIDGVIYVCGLNNFGQLGVPTPKALEDED 402
Query: 330 -EP---VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKE 381
EP + P + + T+ ++ + A++++G +YG G LG +GKE
Sbjct: 403 DEPELKIMHPIKASAFESTTVVELSGIQHI-IALNTQGEVYGIGKNTDNALGLGTWSGKE 461
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT-SIACGNCVSFAIDS 440
DD Y L +V E Q K I+ S+ C S
Sbjct: 462 DD------------HWKYSELQKIDVPE-----------QIKGISASLGC----SIVWTD 494
Query: 441 EGVLYGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G Y WG + QLG G +DD + P KI L+ Y V++V+ H++ LAK
Sbjct: 495 SGNAYSWGYDSSGQLGLGIKDDDDKMVPRPQKITSAHLDGYRVVEVSLADNHALFLAK 552
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 88/226 (38%), Gaps = 43/226 (19%)
Query: 18 QKVFVTSEAVPT-LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV 76
QKV V A L T G VLT G G GQLG V ++ +V D + + + V
Sbjct: 290 QKVIVKIAAGENHLVMLTESGEVLTFGDGSVGQLGRCSRVSHIRSQRMVNDSPDSLRISV 349
Query: 77 ----------------GGMHTVCLTEDGKVYTWGCNDEGALG----REAEGDSEFIPQTV 116
GG T + DG +Y G N+ G LG + E + + +
Sbjct: 350 YDKGKKKLVLFDNIMAGGFWTAARSIDGVIYVCGLNNFGQLGVPTPKALEDEDDEPELKI 409
Query: 117 NLPKKA--------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG---------LKGE 159
P KA V++S G H +AL G VY G D+ +G K
Sbjct: 410 MHPIKASAFESTTVVELS-GIQHIIALNTQGEVYGIGKNTDNALGLGTWSGKEDDHWKYS 468
Query: 160 GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+QK + E + G I++ ++ T GN + G GQLG
Sbjct: 469 ELQKIDVP-EQIKG---ISASLGCSIVWTDSGNAYSWGYDSSGQLG 510
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 178/357 (49%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +V
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ V P + L +T IACG + A + S G++Y +G G QLG G ++
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P VS I ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG +V++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 473 -------------QLNNYTVLQVASGGQHSVILAKPKPN 498
+ V Q+ SGG + +L N
Sbjct: 345 WAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P FV+ ++ + C GG G V TCG GQLG + + + +
Sbjct: 25 PQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALA 82
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-Q 124
D +++ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q
Sbjct: 83 D-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G
Sbjct: 142 VSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG ++ P V L R + + +
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISC 249
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG + QLG + EV P + L + T +A
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---------NPRRVLELMGSEVTQIA 300
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LAL S G IYAFG G+LG + V P+P+
Sbjct: 301 CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 178/357 (49%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +V
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ V P + L +T IACG + A + S G++Y +G G QLG G ++
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 171/401 (42%), Gaps = 61/401 (15%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGC 198
+ WG + + +GI P VS I ++A G +H V L G + T G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 61 NTKGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G+
Sbjct: 110 AGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E D +L G ++ FG G+LG +V++ V
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++
Sbjct: 284 N-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
Query: 471 GK-------------QLNNYTVLQVASGGQHSVILAKPKPN 498
G + V Q+ SGG + +L N
Sbjct: 343 GHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P FV+ ++ + C GG G V TCG GQLG + + + +
Sbjct: 25 PQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALA 82
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-Q 124
D +++ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q
Sbjct: 83 D-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G
Sbjct: 142 VSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG ++ P V L R + + +
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISC 249
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG + QLG + EV P + L + T +A
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---------NPRRVLELMGSEVTQIA 300
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LAL S G IYAFG G+LG + V P+P+
Sbjct: 301 CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHVREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L S G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG YG+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG + R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGHV--REGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL S+G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG YG+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 159/337 (47%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALASDGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG +Y QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSYGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 179/412 (43%), Gaps = 56/412 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFR 148
V+ WG ND+ LG + NL + VQI G + ++G VYA G
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQGQL 204
+ +G+ G P ++ S+S V K+A SG H + LT+ G + + G + G+L
Sbjct: 3526 NGRLGLGIT-TGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
G ++ + + +E LK K + D+ G ++ I+S G + +GL Y +
Sbjct: 3585 GHFSRWNCDKP-----RLIEA----LKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYG 321
LG D NT P +K+L+ ++ +A G +LAL EGK+Y++G D+G
Sbjct: 3636 LGHGD-------NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFG 3688
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+LG + SE P + L+D+ + I CG S A+ G ++ WG G
Sbjct: 3689 KLG-RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKG---------- 3737
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
DY RLG V +P + L+ K I +A G A+
Sbjct: 3738 ----------------DYFRLG-HGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDS 3780
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G ++ WG + Q GNG +P + L Y + +VA G HS+ A
Sbjct: 3781 GQVFAWGDNDHGQQGNGTTTVNRKPALV---VLEGYKISKVACGSSHSIAWA 3829
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 183/422 (43%), Gaps = 66/422 (15%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV----QISAGDSHSVALLEDGTVYA 143
G+++ WG N G LG D + Q V+ AV Q+ G+ A+ +G V+A
Sbjct: 4461 GQIWGWGHNHRGQLGGV---DGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFA 4517
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCP 199
G + E + P +LES+ + + + SG H + L++ G + + G
Sbjct: 4518 TG-YGAGGRLGVGGTESVSH-PTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEG 4575
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
E G+LG + R R + L EV +D G ++ I++ G + +G
Sbjct: 4576 EDGKLGHGNRSPCDRP--RVIDSLRGKEV------VDIAAGGAHSACITANGELYTWGKG 4627
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGR 317
Y +LG DSE Q P L+++L + +A SG +L + + ++++G
Sbjct: 4628 RYGRLGHGDSEDQPR-------PKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGD 4680
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
DYG+LG + S+ P I +LQ + + + CG+ S A+ G +Y WG G
Sbjct: 4681 GDYGKLG-RGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKG------ 4733
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG + V P + +LQ+K + +ACG+ A
Sbjct: 4734 --------------------DYHRLG-HGSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE---GKQLNNYTVLQVASGGQHSVILAK 494
G ++ WG + QLG+G + I P + GK++N +VA G HS+ +
Sbjct: 4773 CTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKIN-----RVACGSAHSLAWST 4827
Query: 495 PK 496
K
Sbjct: 4828 NK 4829
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 165/345 (47%), Gaps = 40/345 (11%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCL 84
+L C T G V CG+ G+LGLG + R+ +L + + V V GG H++ L
Sbjct: 3508 SLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLAL 3567
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYA 143
T DGKV++WG D+G LG + + + L K V+ I+ G SHS A+ +G +Y
Sbjct: 3568 TTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYT 3627
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTA 196
WG G G G G T LK + V +V++A G+ + LT G + +
Sbjct: 3628 WGL-----GEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSW 3682
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGV-YNTFISSKGSIL 254
G + G+LG R G + P EV L+ + + + G ++ ++ G +
Sbjct: 3683 GDGDFGKLG--------RGGSEGCNV--PHEVDRLRDQKVCQIECGAQFSLALTKSGQVW 3732
Query: 255 AFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G +Y +LG D+ V+K P +++ L KK +A G H LA+ G+++
Sbjct: 3733 TWGKGDYFRLGHGTDAHVRK--------PQIVEGLKGKKIVHVAVGALHCLAVTDSGQVF 3784
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
A+G +D+G+ G N + V + L+ I+ +ACG+ S A
Sbjct: 3785 AWGDNDHGQQG--NGTTTVNRKPALVVLEGYKISKVACGSSHSIA 3827
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 161/353 (45%), Gaps = 33/353 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGCN 96
V G D QLG GP + K L ++L + V++V G C+T++GKVY G
Sbjct: 3466 VFCWGLNDKDQLG-GPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEA 3524
Query: 97 DEGALGREAEGDSEFIP-QTVNLPK---KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG + +P Q +L + K V + +G HS+AL DG V++WG D G
Sbjct: 3525 TNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD--G 3582
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G P +E++ + IA G+ H +TS G+L T G E G+LG
Sbjct: 3583 KLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNT 3642
Query: 211 SASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FISSKGSILAFGLNNYSQLGE 266
+ L+P +V L + + V G + ++ +G + ++G ++ +LG
Sbjct: 3643 TQ----------LKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGR 3692
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
SE C PH + L D+K + G SLAL G+++ +G+ DY RLG
Sbjct: 3693 GGSE------GCN-VPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLG-H 3744
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
V +P + L+ K I +A G A+ G ++ WG + Q GNG
Sbjct: 3745 GTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNG 3797
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 144/301 (47%), Gaps = 51/301 (16%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-L 230
+++IAS D H++ LTS G + + G + G+LG ++ EP + L
Sbjct: 619 VIRIASHPDGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHE----------EPALITGL 668
Query: 231 KRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K + + G Y+ ++S G + ++G N+ +LG SE Q TP L+K
Sbjct: 669 SGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQT-------TPMLLKFFK 721
Query: 290 DKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+ +A SG +LA+ G +Y++G DYG+LG + ++ P I L + +
Sbjct: 722 GHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLG-RGGNDGCKTPKVIEKLMGQDVV 780
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-----------------DI------ 384
+ CGN S A+ G +Y WG G+ Y+LG+G ED DI
Sbjct: 781 RVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLH 840
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
+ +G++Y +GR++ G+LG ++S TEPT I ++ K I +ACG +FA S
Sbjct: 841 CMAITEDGELYGWGRNEQGQLGNPSISN-FTEPTLIGGMEGKNIIGVACGPTQTFAWTSG 899
Query: 442 G 442
G
Sbjct: 900 G 900
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 36/236 (15%)
Query: 290 DKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
D++ +AS G+H+ + L S+G+++++G D G+LG + EP I L K +
Sbjct: 616 DREVIRIASHPDGKHY-MGLTSDGEVFSWGNGDGGKLGHGDYQNH-EEPALITGLSGKQV 673
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------------- 383
I CG+ S A+ S G +Y WG GN +LG+G +D
Sbjct: 674 AKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSG 733
Query: 384 -----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ G +Y++G DYG+LG + ++ P I L + + + CGN S A+
Sbjct: 734 DAQTLAVTDSGAVYSWGDGDYGKLG-RGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMAL 792
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +Y WG G+ Y+LG+G ED P +IE L++ V +A G H + + +
Sbjct: 793 TKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEA--LSSKKVKDIAIGSLHCMAITE 846
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 25/292 (8%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALL 136
G H + LT DG+V++WG D G LG + E L K+ +I G S+SVAL
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGN 192
+G VY+WG + + G +G Q TP+ L+ G IV +A SG + +T G
Sbjct: 688 SNGEVYSWG--KGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKG 251
+ + G + G+LGR + + +E L + + V+ G ++ ++ G
Sbjct: 746 VYSWGDGDYGKLGR-----GGNDGCKTPKVIE----KLMGQDVVRVYCGNQFSMALTKSG 796
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ +G + +LG + + P I++LS KK +A G H +A+ +G+
Sbjct: 797 AVYTWGKGDNYRLGHGTEDHARH-------PKQIEALSSKKVKDIAIGSLHCMAITEDGE 849
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
+Y +GR++ G+LG ++S TEPT I ++ K I +ACG +FA S G
Sbjct: 850 LYGWGRNEQGQLGNPSISN-FTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 51/319 (15%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG---PDVMERKTFALVEDL-- 68
Q VF+ AV + + G V + G+G+ G+LG G P R +++ L
Sbjct: 4544 QHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPR----VIDSLRG 4599
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-------- 120
VV++ GG H+ C+T +G++YTWG +G GR GDSE P+ PK
Sbjct: 4600 KEVVDIAAGGAHSACITANGELYTWG---KGRYGRLGHGDSEDQPR----PKLVEALKSY 4652
Query: 121 KAVQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVK 176
+ V ++ +GD+ ++ + +D V++WG +G +G G K P+K+E++ G++K
Sbjct: 4653 RVVDMACGSGDAQTLCITDDDNVWSWGD--GDYGKLGRGGSDGCKVPMKIETLQGQGVMK 4710
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+ G+ V LT G++ T G + +LG + R R +S L+ +K ID
Sbjct: 4711 VECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRP--RKVSALQ------NKKVID 4762
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
++ + G + ++G N+ QLG+ + +Q+ P L+ SL KK
Sbjct: 4763 VACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQR--------PRLVASLLGKKINR 4814
Query: 296 LASGQHHSLALNSEGKIYA 314
+A G HSLA ++ + A
Sbjct: 4815 VACGSAHSLAWSTNKAVSA 4833
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ +GLN+ QLG K P L +LS + + G + EGK
Sbjct: 3465 NVFCWGLNDKDQLGGPKGSKIK-------LPTLNDNLSALRCVQIVGGSKSLFCVTQEGK 3517
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGWG 369
+YA G GRLGL + V+ P I SL I +A G S A+ ++G ++ WG
Sbjct: 3518 VYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWG 3577
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ +GK+ F R + + P I +L+ K + IA
Sbjct: 3578 EGD---------------DGKLGHFSRWNCDK------------PRLIEALKSKRVRDIA 3610
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S AI S G LY WG+G +LG+G L+P ++ K L + V+QVA G + +
Sbjct: 3611 CGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQV--KALAHERVVQVACGSRDA 3668
Query: 490 VILA 493
LA
Sbjct: 3669 QTLA 3672
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 33/292 (11%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHS 132
GG H + L+ +G+VY+WG EG G+ G+ P+ ++ K+ V I+AG +HS
Sbjct: 4556 GGKHCLALSAEGEVYSWG---EGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHS 4612
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLT 188
+ +G +Y WG R +G +G Q P +E++ +V +A SG + +T
Sbjct: 4613 ACITANGELYTWGKGR--YGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCIT 4670
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFI 247
N+ + G + G+LG R S + M L+ + + V G ++ +
Sbjct: 4671 DDDNVWSWGDGDYGKLG----RGGSDGCKVPMKI-----ETLQGQGVMKVECGSQFSVAL 4721
Query: 248 SSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ GS+ +G +Y +LG +D V++ P + +L +KK +A G H +A
Sbjct: 4722 TKSGSVYTWGKGDYHRLGHGSDDHVRR--------PRKVSALQNKKVIDVACGSLHCVAC 4773
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G+++++G +D G+LG + + P + SL K I +ACG+ S A
Sbjct: 4774 TDTGEVFSWGDNDEGQLG-DGTTNAIQRPRLVASLLGKKINRVACGSAHSLA 4824
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 35/296 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D + AL+ L V ++ G ++V LT +G+VY
Sbjct: 635 TSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVY 693
Query: 92 TWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWG 145
+WG +G GR G SE P + K + V ++ +GD+ ++A+ + G VY+WG
Sbjct: 694 SWG---KGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWG 750
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + G +V++ G + LT G + T G + +
Sbjct: 751 D--GDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYR 808
Query: 204 LGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
LG T+ A P ++ L K + D+ G ++ I+ G + +G N
Sbjct: 809 LGHGTEDHAR----------HPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQ 858
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
QLG + F P LI + K +A G + A S G+ R
Sbjct: 859 GQLGNPSI-------SNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQWIVSSR 907
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 178/357 (49%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +V
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ V P + L +T IACG + A + S G++Y +G G QLG G ++
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P VS I ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG +V++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 473 -------------QLNNYTVLQVASGGQHSVILAKPKPN 498
+ V Q+ SGG + +L N
Sbjct: 345 WAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P FV+ ++ + C GG G V TCG GQLG + + + +
Sbjct: 25 PQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALA 82
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-Q 124
D +++ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q
Sbjct: 83 D-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G
Sbjct: 142 VSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG ++ P V L R + + +
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISC 249
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG + QLG + EV P + L + T +A
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---------NPRRVLELMGSEVTQIA 300
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LAL S G IYAFG G+LG + V P+P+
Sbjct: 301 CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 67/400 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMER-KTFALVEDLDNVV---EVVVGGMHTVCLTEDGKVYTWG 94
+L CG GQLGLG E ++ LVE N + ++ G H+V L +DG V++ G
Sbjct: 18 LLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCG 77
Query: 95 CNDEGALG----REAEGDSEFIPQTVNLPK-----KAVQISAGDSHSVALLEDGTVYAWG 145
ND LG + E + +++ + + ++ GD+H VAL DG +++WG
Sbjct: 78 NNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWG 137
Query: 146 SFRDSHGSMGLKGEGI---QKTPLKLE-SVSGIVKIASGADHFVMLTSRGNLLTA-GCPE 200
S + +G +G++ + + P E +++ IV+IA G++H + L S +L A G +
Sbjct: 138 S--NVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLND 195
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTFI-SSKGSILAFGL 258
GQLG T+ SF+ P V L I + G ++ + + G++ +G
Sbjct: 196 HGQLGIGTRE----------SFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGK 245
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N + Q+G+ + Q+ P L+K L +K LA G+ S+A+ + G ++ FG
Sbjct: 246 NMFGQIGQNE---QRD----ILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAG 298
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
YG+LG N + + P + L + +ACG C + AI
Sbjct: 299 TYGQLGHGNQNSELF-PKQVMELMGSVVLDVACGRCHTLAI------------------- 338
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+E K+YAFG + G+LGL NV + P PIP
Sbjct: 339 --------TENKLYAFGLNTSGQLGLLNVKHTTSIPLPIP 370
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 153/325 (47%), Gaps = 47/325 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------------NVVEVVVGGMHTVCL 84
G V +CG D QLG D ++RK L E+L +V+ V G H V L
Sbjct: 71 GSVFSCGNNDFYQLG--HDGIKRKP-NLYENLHWYIDVKQSFVGIHVISVACGDAHCVAL 127
Query: 85 TEDGKVYTWGCNDEGALGRE-----AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE-D 138
T DG +++WG N G LG E A+ I Q +NL VQI+ G +HS+AL D
Sbjct: 128 TNDGHLFSWGSNVYGQLGVERMNVVAKARYPRI-QEINLA-NIVQIACGSNHSLALESTD 185
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTA 196
G ++AWG + HG +G+ P + + G I ++A+GA H ++LT G +
Sbjct: 186 GVLHAWG--LNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGW 243
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGVYNTFISSKGSIL 254
G GQ+G+ QR L P V L R K I ++ +++ G +
Sbjct: 244 GKNMFGQIGQNEQR----------DILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLF 293
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG Y QLG + N+ F P + L +A G+ H+LA+ +E K+YA
Sbjct: 294 TFGAGTYGQLGHGNQ------NSELF-PKQVMELMGSVVLDVACGRCHTLAI-TENKLYA 345
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIP 339
FG + G+LGL NV + P PIP
Sbjct: 346 FGLNTSGQLGLLNVKHTTSIPLPIP 370
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 164/347 (47%), Gaps = 51/347 (14%)
Query: 186 MLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
++ +LL G GQLG I + + R ++ +E + LK I + G +
Sbjct: 11 LILKSMSLLCCGNTSDGQLGLGGIAEENV-----RSLTLVESTKNFLK---IRQIACGRH 62
Query: 244 NT-FISSKGSILAFGLNNYSQLGEADSEVQKSGN---TCFFTPHLIKSLSDKKFTMLASG 299
++ + GS+ + G N++ QLG +++ N + + +S +A G
Sbjct: 63 HSVMLLDDGSVFSCGNNDFYQLGH--DGIKRKPNLYENLHWYIDVKQSFVGIHVISVACG 120
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD---KTITSIACGNCVS 356
H +AL ++G ++++G + YG+LG++ ++ V P +Q+ I IACG+ S
Sbjct: 121 DAHCVALTNDGHLFSWGSNVYGQLGVERMN--VVAKARYPRIQEINLANIVQIACGSNHS 178
Query: 357 FAIDS-EGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEG 389
A++S +GVL+ WG+ + QLG G + +L G
Sbjct: 179 LALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSG 238
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
++ +G++ +G++G +N + P+ + L+ + + +ACG S A+ + G L+ +G
Sbjct: 239 TVFGWGKNMFGQIG-QNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGA 297
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G QLG+G ++ L P ++ +L VL VA G H++ + + K
Sbjct: 298 GTYGQLGHGNQNSELFPKQV--MELMGSVVLDVACGRCHTLAITENK 342
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD 69
R Q N + V + + +L ++ GV+ G D GQLG+G R++F ++
Sbjct: 159 RIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGT----RESFIGPTTVN 214
Query: 70 N-----VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KA 122
+ ++ G H++ LT G V+ WG N G +G+ + D + P V L + K
Sbjct: 215 KLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILY-PSLVKLLRTQKV 273
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-----SGIVKI 177
++++ G+ SVA+ G ++ +G+ G+ G G G Q + L + V S ++ +
Sbjct: 274 IRLACGEDFSVAVTATGGLFTFGA-----GTYGQLGHGNQNSELFPKQVMELMGSVVLDV 328
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
A G H + +T L G GQLG + + +
Sbjct: 329 ACGRCHTLAIT-ENKLYAFGLNTSGQLGLLNVKHTT 363
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 16 PSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL 68
PS + ++ V L C T G + T G G GQLG G E ++E +
Sbjct: 262 PSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELM 321
Query: 69 DNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
+VV +V G HT+ +TE+ K+Y +G N G LG + IP + + K+
Sbjct: 322 GSVVLDVACGRCHTLAITEN-KLYAFGLNTSGQLGLLNVKHTTSIPLPIPIEKQ 374
>gi|146295924|ref|YP_001179695.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409500|gb|ABP66504.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 730
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 211/456 (46%), Gaps = 82/456 (17%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS-AGD 129
+V V GG + +TE+G++Y W LG E S ++P V + V+I+ AG
Sbjct: 48 IVYVDTGGNQNLAITENGELYEW------ELGGTLE--SRYLPTKV---MEHVKIAKAGW 96
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
+H +A+ + G +Y WG+ + +G +G + + TP+K+ + +V IA+G H + +T
Sbjct: 97 AHVLAIDQSGNLYCWGN--NEYGQLGDGTKESKTTPVKI--LGNVVAIAAGNYHSLAVTK 152
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-RKHIDDVFTGVYNTF-I 247
G+L G ++GQLG T+ ++ P+K ++ DV G Y +F I
Sbjct: 153 NGDLYAWGLNDRGQLGNGTRVDCNK--------------PIKIMTNVKDVAAGWYTSFAI 198
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G + +G N QLG+ S++ K P I S +++G +H LAL
Sbjct: 199 TKNGDLYGWGANEVGQLGDG-SKIDK------IKPVKIMS----GVQSVSAGSNHVLALT 247
Query: 308 SEGKIYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+G++YA+G ++ LG KN SE +P + K I+ I G S ID
Sbjct: 248 KKGELYAWGYNNDSELGFDPGWGKNFSE---KPVRVNFKDIKGISYIYAGESYSLLIDKN 304
Query: 363 GVLYGWGMGNGY-----------QLGNGK---------EDDILNSEGKIYAFGRHDYGRL 402
GVL WG+G GY Q NGK +++ + GK+ D
Sbjct: 305 GVL--WGLGRGYTDTIVIKNKFRQSNNGKLMEFKPVKIMSNVMLASGKLAV--TKDKKLY 360
Query: 403 GLKNVSEPVT----EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
N + P E P L K ++ + G S A+ +G LYGWG + QLGNG
Sbjct: 361 IFCNNTGPFIFGAPERVDRPVLIMKNVSLCSAGADHSLALTKDGKLYGWGNNSYNQLGNG 420
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
++ + P KI+ +N ++ + +G Q S ++ K
Sbjct: 421 TKNPLCRPTKID---INVGEIIGILAGTQRSFLINK 453
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 183/424 (43%), Gaps = 85/424 (20%)
Query: 40 LTC-GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
L C G + GQLG G E KT V+ L NVV + G H++ +T++G +Y WG ND
Sbjct: 108 LYCWGNNEYGQLGDGTK--ESKTTP-VKILGNVVAIAAGNYHSLAVTKNGDLYAWGLNDR 164
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
G LG D + + + ++AG S A+ ++G +Y WG+ + G +G G
Sbjct: 165 GQLGNGTRVDCN---KPIKIMTNVKDVAAGWYTSFAITKNGDLYGWGA--NEVGQLG-DG 218
Query: 159 EGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-------RITQR 210
I K P+K+ +SG+ +++G++H + LT +G L G +LG +++
Sbjct: 219 SKIDKIKPVKI--MSGVQSVSAGSNHVLALTKKGELYAWGYNNDSELGFDPGWGKNFSEK 276
Query: 211 SASRNAR--RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
N + +G+S++ GE Y+ I G + G Y+
Sbjct: 277 PVRVNFKDIKGISYIYAGE--------------SYSLLIDKNGVLWGLG-RGYTDTIVIK 321
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF----GRHDYGRLG 324
++ ++S N +K +S+ MLASG+ LA+ + K+Y F G +G
Sbjct: 322 NKFRQSNNGKLMEFKPVKIMSN---VMLASGK---LAVTKDKKLYIFCNNTGPFIFG--- 372
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
E P L K ++ + G S A+ +G LYGWG + QLGNG ++
Sbjct: 373 -------APERVDRPVLIMKNVSLCSAGADHSLALTKDGKLYGWGNNSYNQLGNGTKN-- 423
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
P+ PT I + I I G SF I+ +G L
Sbjct: 424 -------------------------PLCRPTKI-DINVGEIIGILAGTQRSFLINKKGEL 457
Query: 445 YGWG 448
+GWG
Sbjct: 458 FGWG 461
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 215/540 (39%), Gaps = 118/540 (21%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G + G D GQLG G V K + + NV +V G + +T++G +Y W
Sbjct: 151 TKNGDLYAWGLNDRGQLGNGTRVDCNKPIKI---MTNVKDVAAGWYTSFAITKNGDLYGW 207
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G N+ G LG ++ D + V + +SAG +H +AL + G +YAWG DS
Sbjct: 208 GANEVGQLGDGSKIDK---IKPVKIMSGVQSVSAGSNHVLALTKKGELYAWGYNNDSE-- 262
Query: 154 MGLK---GEGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G G+ + P+++ + + GI I +G + +++ G L G +G I
Sbjct: 263 LGFDPGWGKNFSEKPVRVNFKDIKGISYIYAGESYSLLIDKNGVLWGLG---RGYTDTIV 319
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
++ R + G +E V K + +V ++ + F N + A
Sbjct: 320 IKNKFRQSNNG-KLMEFKPV----KIMSNVMLASGKLAVTKDKKLYIFCNNTGPFIFGAP 374
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
V + P LI K ++ ++G HSLAL +GK+Y +G + Y +LG
Sbjct: 375 ERVDR--------PVLIM----KNVSLCSAGADHSLALTKDGKLYGWGNNSYNQLG-NGT 421
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG--MGNGYQLGNGK------ 380
P+ PT I + I I G SF I+ +G L+GWG + N N K
Sbjct: 422 KNPLCRPTKI-DINVGEIIGILAGTQRSFLINKKGELFGWGSNINNTIDFSNNKIISKPK 480
Query: 381 --------------EDDILNSEGKIYAF-----GRHDY--------GRLGLKNVSEPVTE 413
E ++ GK+YA D R + N++ V +
Sbjct: 481 MVLKEIRQVDTNQNETFVVTKNGKMYALIFVVQAERDTLKWQIIKENRQKMYNITNNVDK 540
Query: 414 PTP------------IPSLQDKT--------------------ITSIACGNCVSFAIDSE 441
+ + +L+ KT + S+A G A+ +
Sbjct: 541 ISAGYQTLILKKDGTLYALKGKTSWKGSHTQIESYVIEKVLNNVVSMASGYDHCLAVTKD 600
Query: 442 GVLYGWG-------MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G LY WG +GNG + N + D +P+K+ ++N V VA+G S L K
Sbjct: 601 GSLYAWGSDPAHGEIGNGIAIPNLRID---KPVKV----MDN--VKMVAAGANRSFALTK 651
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 116/543 (21%), Positives = 198/543 (36%), Gaps = 162/543 (29%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G + G + GQLG G + + K V+ + V V G H + LT+ G++Y W
Sbjct: 199 TKNGDLYGWGANEVGQLGDGSKIDKIKP---VKIMSGVQSVSAGSNHVLALTKKGELYAW 255
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ----ISAGDSHSVALLEDGTVYAWG---- 145
G N++ LG + F + V + K ++ I AG+S+S+ + ++G ++ G
Sbjct: 256 GYNNDSELGFDPGWGKNFSEKPVRVNFKDIKGISYIYAGESYSLLIDKNGVLWGLGRGYT 315
Query: 146 -------SFRDSHGSMGLKGEGIQKTPLKLES----VSGIVKI----------------- 177
FR S+ G+ ++ P+K+ S SG + +
Sbjct: 316 DTIVIKNKFRQSN-----NGKLMEFKPVKIMSNVMLASGKLAVTKDKKLYIFCNNTGPFI 370
Query: 178 --------------------ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
++GADH + LT G L G QLG T+ R
Sbjct: 371 FGAPERVDRPVLIMKNVSLCSAGADHSLALTKDGKLYGWGNNSYNQLGNGTKNPLCR--- 427
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P ++ + I + G +F I+ KG + +G N ++ + S N
Sbjct: 428 -------PTKIDINVGEIIGILAGTQRSFLINKKGELFGWGSN-------INNTIDFSNN 473
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF-----GRHDY--------GRL 323
P ++ K+ + + Q+ + + GK+YA D R
Sbjct: 474 KIISKPKMVL----KEIRQVDTNQNETFVVTKNGKMYALIFVVQAERDTLKWQIIKENRQ 529
Query: 324 GLKNVSEPVTEPTP------------IPSLQDKT--------------------ITSIAC 351
+ N++ V + + + +L+ KT + S+A
Sbjct: 530 KMYNITNNVDKISAGYQTLILKKDGTLYALKGKTSWKGSHTQIESYVIEKVLNNVVSMAS 589
Query: 352 GNCVSFAIDSEGVLYGWG-------MGNGYQLGNGKEDD-------------------IL 385
G A+ +G LY WG +GNG + N + D L
Sbjct: 590 GYDHCLAVTKDGSLYAWGSDPAHGEIGNGIAIPNLRIDKPVKVMDNVKMVAAGANRSFAL 649
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
G++YA+G + G LG ++ EP P+ + I+C A+ EG LY
Sbjct: 650 TKNGEVYAWG-FNLGTLGTD--TDSWYEPRPVKVFEGAVW--ISCKGGHVLALTREGDLY 704
Query: 446 GWG 448
GWG
Sbjct: 705 GWG 707
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD 69
R++ N + V S TL K G L +G T G + +++ + + L+
Sbjct: 528 RQKMYNITNNVDKISAGYQTLILKKDG--TLYALKGKTSWKGSHTQI---ESYVIEKVLN 582
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCN-DEGALGREAEGDSEFIPQTVNLPKKAVQISAG 128
NVV + G H + +T+DG +Y WG + G +G + I + V + ++AG
Sbjct: 583 NVVSMASGYDHCLAVTKDGSLYAWGSDPAHGEIGNGIAIPNLRIDKPVKVMDNVKMVAAG 642
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLT 188
+ S AL ++G VYAWG + G++G + + P ++ G V I+ H + LT
Sbjct: 643 ANRSFALTKNGEVYAWGF---NLGTLGTDTDSWYE-PRPVKVFEGAVWISCKGGHVLALT 698
Query: 189 SRGNLLTAGCPEQGQL 204
G+L G GQ+
Sbjct: 699 REGDLYGWGDNSLGQV 714
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ-------------LGNGKEDDIL--NSE 388
K I + G + AI G LY W +G + + +L +
Sbjct: 46 KKIVYVDTGGNQNLAITENGELYEWELGGTLESRYLPTKVMEHVKIAKAGWAHVLAIDQS 105
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G +Y +G ++YG+LG E T P I + +IA GN S A+ G LY WG
Sbjct: 106 GNLYCWGNNEYGQLG-DGTKESKTTPVKILG----NVVAIAAGNYHSLAVTKNGDLYAWG 160
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ + QLGNG D +P+KI V VA+G S + K
Sbjct: 161 LNDRGQLGNGTRVDCNKPIKIMT------NVKDVAAGWYTSFAITK 200
>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 560
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N G LG + DS P V+LP ++AG +H++A+ GT+ AWG +S
Sbjct: 61 WGDNASGQLGDGSTADSSM-PVAVSLPAGVTVTTVAAGAAHNLAVTSAGTILAWG--DNS 117
Query: 151 HGSMGLKGEGIQKTPLK--LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +G + TP+ L + + +A+GA H + LTS G +L G GQLG
Sbjct: 118 SGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANTIGQLGD-- 175
Query: 209 QRSASRNARRGMSFLEPGEV----PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
G + P V P ++ ++S G++LA+G N QL
Sbjct: 176 ----------GTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQL 225
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
GE + + TP ++ S T +A G HSLA+ S G + A+G + G+LG
Sbjct: 226 GEGTTIPSR-------TPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLG 278
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
++ T P + T+T++A G S A+ S G + WG
Sbjct: 279 DGTTADRST-PVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGS-------------- 323
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
NS G++ G + S PVT +P T+T+IA G+ A+ S G
Sbjct: 324 -NSSGQL--------GDGTTADRSTPVTVSSP----AGTTVTAIAGGDAHGLAVTSVGAA 370
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
WG + QLG+G D + P+ + + T+ +A+G HSV +A P
Sbjct: 371 IAWGNNSFGQLGDGTNTDRVTPVAVS-LPVGTTTLTAIAAGAAHSVAVAAPP 421
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 149/332 (44%), Gaps = 25/332 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G +L G +GQLG G A+ + V V G H++ LT G V
Sbjct: 105 TSAGTILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLA 164
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS--HSVALLEDGTVYAWGSFRDS 150
WG N G LG DS P VNLP + HS+A+ GTV AWG ++
Sbjct: 165 WGANTIGQLGDGTTIDSPA-PVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWG--DNA 221
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIA-SGAD-HFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +G +TP+ + SG+ A +G D H + +TS G +L G GQLG T
Sbjct: 222 SGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGT 281
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEA 267
+A R+ +S + V G+ ++ +SS G++LA+G N+ QLG+
Sbjct: 282 --TADRSTPVAVSLS-------GGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDG 332
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ + TP + S + T +A G H LA+ S G A+G + +G+LG
Sbjct: 333 TTADRS-------TPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGT 385
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
++ VT + T+T+IA G S A+
Sbjct: 386 NTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAV 417
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 172/405 (42%), Gaps = 50/405 (12%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDS 130
+V G H++ + DG +Y WG N G LG + +S +P V+ P Q+SAG
Sbjct: 53 QVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSS-VPVLVSTPDGVTFTQVSAGAD 111
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES---VSGIV--KIASGADHFV 185
HS+A+ DG YAWG R++ G +G PL + + SG+ ++ +G H +
Sbjct: 112 HSLAVGSDGNAYAWG--RNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSL 169
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
+ S G++ + G GQLG T ++S + + G VP ++
Sbjct: 170 AVGSNGDIYSWGYNRSGQLGDGTTLASSVPLK-----VSAGAVPAGVTFSQVSAGDRHSL 224
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I S G A+G QLG + P L+ + + FT +++G HSLA
Sbjct: 225 AIGSNGKTYAWGEARGGQLGIGSISRTPA-------PALVSAPAGVSFTQVSAGDLHSLA 277
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ S+GK YA+G +D G+LG + + P + + +T ++ G S AI ++G
Sbjct: 278 VGSDGKAYAWGNNDSGQLGNATTTSSL-APVLVSPMGGLAVTQVSAGADHSLAIGADGNA 336
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
Y WG+ QLGN N T P + + T
Sbjct: 337 YAWGLNVNGQLGN---------------------------NTITTSTVPVMVTAPDGVTF 369
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T I G S S+ Y WG + QLGNG D L P+ I
Sbjct: 370 TRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAIS 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA-------- 122
+ +V+ GG H++ + +G +Y+WG N G L GD + +V L A
Sbjct: 158 ISQVMAGGFHSLAVGSNGDIYSWGYNRSGQL-----GDGTTLASSVPLKVSAGAVPAGVT 212
Query: 123 -VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIAS 179
Q+SAGD HS+A+ +G YAWG R G +G+ P + + +G+ ++++
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARG--GQLGIGSISRTPAPALVSAPAGVSFTQVSA 270
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDV 238
G H + + S G G + GQLG T S+ L P V P+ + V
Sbjct: 271 GDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSS----------LAPVLVSPMGGLAVTQV 320
Query: 239 FTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G ++ I + G+ A+GLN QLG T P ++ + FT +
Sbjct: 321 SAGADHSLAIGADGNAYAWGLNVNGQLGNNTI-------TTSTVPVMVTAPDGVTFTRIE 373
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+G HSL S+ Y +G + +G+LG S+ P I IT ++ G V
Sbjct: 374 AGGLHSLTAASDENTYTWGANSFGQLG-NGTSDGSLVPVAISRF--PVITEVSFGGVV 428
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 102/236 (43%), Gaps = 44/236 (18%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSI 349
FT +++G +HSLA+ S+G IYA+G + G+LG + N S PV TP T T +
Sbjct: 51 FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTP----DGVTFTQV 106
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------------- 383
+ G S A+ S+G Y WG +LGNG
Sbjct: 107 SAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGF 166
Query: 384 ---ILNSEGKIYAFGRHDYGRLG----LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
+ S G IY++G + G+LG L + +P+ T + ++ G+ S
Sbjct: 167 HSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPA--GVTFSQVSAGDRHSL 224
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
AI S G Y WG G QLG G P + ++T QV++G HS+ +
Sbjct: 225 AIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFT--QVSAGDLHSLAV 278
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +V
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P VS I ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG +V++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 473 -------------QLNNYTVLQVASGGQHSVILAKPKPN 498
+ V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P FV+ ++ + C GG G V TCG GQLG + + + +
Sbjct: 25 PQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALA 82
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-Q 124
D +++ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q
Sbjct: 83 D-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G
Sbjct: 142 VSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG ++ P V L R + + +
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISC 249
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG + QLG + EV P + L + T +A
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---------NPRRVLELMGSEVTQIA 300
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LAL S G IYAFG G+LG + V P+P+
Sbjct: 301 CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|302405721|ref|XP_003000697.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
gi|261360654|gb|EEY23082.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
Length = 554
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 25/239 (10%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
IQ TPL + + I +A+G++H + L ++GN+L GC +Q QLGR R RN M
Sbjct: 290 IQMTPLYIPELKSIKALAAGSNHILALENKGNVLAWGCGQQNQLGR---RIIERNK---M 343
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
S L P + + +K+I+ + G Y++F + +KG + A+GLNN+++ G E +
Sbjct: 344 SSLVPQGMGIPKKNIEKIACGQYHSFALDTKGRVYAWGLNNFAETGI--REGAGEDDAVI 401
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-------------- 325
P ++ SL + K +A GQHHSLA +GK+ +GR D ++G
Sbjct: 402 LRPTIVDSLEEHKIVDIAGGQHHSLACTEDGKLLTWGRFDGFQVGFAESAVSEDDLIRDE 461
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
N + + PT +PS + + +A G +FAI +G Y WG + YQ G G +D+
Sbjct: 462 SNNARILAVPTVVPSPE--GVVRVAAGTDNNFAITKDGKAYSWGFSSNYQTGQGTIEDV 518
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 30/257 (11%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ +KG++LA+G +QLG E K + P + + K +A GQ+HS AL
Sbjct: 316 LENKGNVLAWGCGQQNQLGRRIIERNKMSS---LVPQGM-GIPKKNIEKIACGQYHSFAL 371
Query: 307 NSEGKIYAFGRHDYGRLGLKNVS----EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+++G++YA+G +++ G++ + + PT + SL++ I IA G S A +
Sbjct: 372 DTKGRVYAWGLNNFAETGIREGAGEDDAVILRPTIVDSLEEHKIVDIAGGQHHSLACTED 431
Query: 363 GVLYGWGMGNGYQLGNGK----EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
G L WG +G+Q+G + EDD++ E N + + PT +P
Sbjct: 432 GKLLTWGRFDGFQVGFAESAVSEDDLIRDES----------------NNARILAVPTVVP 475
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
S + + +A G +FAI +G Y WG + YQ G G +D+ P I+ +
Sbjct: 476 SPE--GVVRVAAGTDNNFAITKDGKAYSWGFSSNYQTGQGTIEDVEAPTLIDNTAVRGQK 533
Query: 479 VLQVASGGQHSVILAKP 495
++ +GGQ S++ P
Sbjct: 534 LVSAGAGGQFSILCGVP 550
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 26/271 (9%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR---E 104
G LG D+ + T + +L ++ + G H + L G V WGC + LGR E
Sbjct: 280 GILGFNHDIKIQMTPLYIPELKSIKALAAGSNHILALENKGNVLAWGCGQQNQLGRRIIE 339
Query: 105 AEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWG--SFRDSHGSMGL-KGEG 160
S +PQ + +PKK ++ I+ G HS AL G VYAWG +F ++ G + +
Sbjct: 340 RNKMSSLVPQGMGIPKKNIEKIACGQYHSFALDTKGRVYAWGLNNFAETGIREGAGEDDA 399
Query: 161 IQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ--------R 210
+ P ++S+ IV IA G H + T G LLT G + Q+G R
Sbjct: 400 VILRPTIVDSLEEHKIVDIAGGQHHSLACTEDGKLLTWGRFDGFQVGFAESAVSEDDLIR 459
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
S NAR P VP + + V G N F I+ G ++G ++ Q G+
Sbjct: 460 DESNNAR---ILAVPTVVP-SPEGVVRVAAGTDNNFAITKDGKAYSWGFSSNYQTGQGTI 515
Query: 270 EVQKS----GNTCFFTPHLIKSLSDKKFTML 296
E ++ NT L+ + + +F++L
Sbjct: 516 EDVEAPTLIDNTAVRGQKLVSAGAGGQFSIL 546
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 37/283 (13%)
Query: 98 EGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS----------- 146
+G LG + + P + K ++AG +H +AL G V AWG
Sbjct: 279 DGILGFNHDIKIQMTPLYIPELKSIKALAAGSNHILALENKGNVLAWGCGQQNQLGRRII 338
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
R+ S+ +G GI K I KIA G H L ++G + G + G
Sbjct: 339 ERNKMSSLVPQGMGIPK--------KNIEKIACGQYHSFALDTKGRVYAWGLNNFAETG- 389
Query: 207 ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQL 264
I + + +A L P V L+ I D+ G +++ ++ G +L +G + Q+
Sbjct: 390 IREGAGEDDA----VILRPTIVDSLEEHKIVDIAGGQHHSLACTEDGKLLTWGRFDGFQV 445
Query: 265 GEADSEV-------QKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G A+S V +S N P ++ S + +A+G ++ A+ +GK Y++G
Sbjct: 446 GFAESAVSEDDLIRDESNNARILAVPTVVP--SPEGVVRVAAGTDNNFAITKDGKAYSWG 503
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+ G + E V PT I + + ++ G F+I
Sbjct: 504 FSSNYQTGQGTI-EDVEAPTLIDNTAVRGQKLVSAGAGGQFSI 545
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +V
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P VS I ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG +V++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 473 -------------QLNNYTVLQVASGGQHSVILAKPKPN 498
+ V Q+ SGG + +L N
Sbjct: 345 WAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P FV+ ++ + C GG G V TCG GQLG + + + +
Sbjct: 25 PQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALA 82
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-Q 124
D +++ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q
Sbjct: 83 D-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G
Sbjct: 142 VSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG ++ P V L R + + +
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISC 249
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG + QLG + EV P + L + T +A
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---------NPRRVLELMGSEVTQIA 300
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LAL S G IYAFG G+LG + V P+P+
Sbjct: 301 CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + V D ++ EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSD-RSIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 VNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG +V
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P VS I ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG +V++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 473 -------------QLNNYTVLQVASGGQHSVILAKPKPN 498
+ V Q+ SGG + +L N
Sbjct: 345 WAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLCSTYEN 383
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P FV+ ++ + C GG G V TCG GQLG + + + +
Sbjct: 25 PQVCRFVSDRSIKEVAC--GGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALA 82
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-Q 124
D +++ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q
Sbjct: 83 D-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G
Sbjct: 142 VSCGNWHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG ++ P V L R + + +
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISC 249
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG + QLG + EV P + L + T +A
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---------NPRRVLELMGSEVTQIA 300
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LAL S G IYAFG G+LG + V P+P+
Sbjct: 301 CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPV 341
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 175/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+G V E + V D +V EV GG H V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSD-RSVKEVACGGDHCVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNQ---PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQTSPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + +G GI P VS + ++A G DH V L G + T G
Sbjct: 3 CWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNQPEQIG---------ALADQHIIHVACGESHSLALSDQGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 161/349 (46%), Gaps = 44/349 (12%)
Query: 9 LRKQAENPSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMER 59
LR P FV+ +V + C GG G V TCG GQLG + +
Sbjct: 18 LRGIVAEPQACGFVSDRSVKEVAC--GGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP 75
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-L 118
+ + D +++ V G H++ L++ G++++WG +G LG DS +P+ + L
Sbjct: 76 EQIGALAD-QHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 119 PKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI-- 174
++ + Q+S G+ H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI
Sbjct: 135 NQQTILQVSCGNWHCLALATDGQFFTWG--KNSHGQLGLGKEFPSQTSPQRVRSLEGIPL 192
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-K 233
++A+G H L+ G + G GQLG ++ P V L R +
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQ 242
Query: 234 HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSD 290
+ + G +T + +K G + FG + QLG + EV P + L
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMG 293
Query: 291 KKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+ T +A G+ H+LA S G IYAFG G+LG + V P+P+
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SH++AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EEDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 172/399 (43%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G +N +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHNLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P +I+ L+ + ++ G HSLAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDAVA------VPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E+D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H + L++ G++++WG +G LG D+ +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
HS+AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHSLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|402471039|gb|EJW04978.1| hypothetical protein EDEG_00095 [Edhazardia aedis USNM 41457]
Length = 396
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 166/331 (50%), Gaps = 25/331 (7%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAG 128
NV +V G +HT+ L D K+YTWGCNDE ALGRE + D + V+ K+ V ISAG
Sbjct: 62 NVQSIVAGSLHTIALV-DKKIYTWGCNDEFALGREGDEDKILEVVLKVSKKKEVVGISAG 120
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVML 187
SHS LLE+G VYAWG+FRD+ G +G + QKTP ++ +V+I S + ML
Sbjct: 121 ASHSACLLENGNVYAWGTFRDTSGIIGFDYKTKYQKTPKLIQ--RNVVQIFSTDNVITML 178
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF- 246
G +++ G +I +R+ + M + + +K I ++ G ++
Sbjct: 179 LKTGGIVSYGADLWRDRFKIERRTRCFKNKPKMKTVLRAKSS--QKKIVEISGGDHHVLG 236
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
I+S G + A+G N Q G D ++ C P+ I + K + G HSL L
Sbjct: 237 ITSDGYVKAWGNNFCGQHGN-DHKI------CCDAPNDIIKI--KNIVKVKGGTTHSLFL 287
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+++G +Y G + YG+L N E +T P+L + A ++F + +GV Y
Sbjct: 288 DNKGNLYGCGENGYGQLS-HNEKELLT-----PTLVATNVLDFATAGLITFVVKKDGV-Y 340
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKI-YAFGR 396
G +LG+ ++ ++ KI Y FG+
Sbjct: 341 SCGTNYYGELGHVEDGKDISFLKKIEYNFGK 371
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 163/342 (47%), Gaps = 39/342 (11%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--V 71
++P Q V + S G V+ + G+G+ GQLG G D +R ++ D +
Sbjct: 9 DSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHG-DAEDRLVPTVLSGFDAPAI 67
Query: 72 VEVVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
V+ G HT +ED +VY+WG D G LG D F PQ V + K QI+ G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV-FTPQPVKALQGLKIKQIACG 126
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVM 186
DSH +A+ G V +WG R+ +G +GL P K+++ + IA+GA+H
Sbjct: 127 DSHCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNT 245
+T G+L G G LG RN R L P +V ++ + + V G +T
Sbjct: 185 VTEDGDLYGWGWGRYGNLGL-----GDRNDR-----LLPEKVSSVEGEKMVLVACGWRHT 234
Query: 246 F-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+S G++ +G + Y QLG D E PH +++L D + ++ G H++
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHGDFEDH-------LVPHKVEALKDSTISQISGGWRHTM 287
Query: 305 ALNSEGKIYAFGRHDYGRLGLKN---------VSEPVTEPTP 337
AL SEGK+Y +G + +G++G+ N VS P +E P
Sbjct: 288 ALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPGSENLP 329
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 46/324 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+V +++GA H V L + L + G E GQLG R + L + P
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAPA--- 66
Query: 234 HIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I V G +T S+ + ++G ++ +LG +S + FTP +K+L
Sbjct: 67 -ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS-------SDVFTPQPVKALQGL 118
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K +A G H LA+ G++ ++GR+ G+LGL + + P I + + + IA
Sbjct: 119 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFESVCVKMIAA 177
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE----------------------- 388
G + A+ +G LYGWG G LG G +D L E
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237
Query: 389 ---GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
G +Y +G YG+LG + + + P + +L+D TI+ I+ G + A+ SEG LY
Sbjct: 238 SDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSEGKLY 296
Query: 446 GWGMGNGYQLGNGKEDDILEPMKI 469
GWG Q+G G DD P ++
Sbjct: 297 GWGWNKFGQVGVGNNDDHSSPGQV 320
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ ++++G HS+AL + + ++GR + G+LG + + + PT + ITS+
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVI 71
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A ED++ ++Y++G D+GRLG N S+
Sbjct: 72 CGADHTTAY--------------------SEDEL-----QVYSWGWGDFGRLGHGNSSDV 106
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P P+ +LQ I IACG+ A+ G + WG QLG G +D L P KI+
Sbjct: 107 FT-PQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQ 165
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ V +A+G +H+ + +
Sbjct: 166 A--FESVCVKMIAAGAEHTAAVTE 187
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 49/355 (13%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ V G T+ L DG V++WG N G LG +S P V ISAG +H
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNS-PVQVKGLNGITAISAGWAH 96
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
VAL DGTV+ WG G +G ++ TP + ++GI I++G +H + L + G
Sbjct: 97 FVALKSDGTVWTWG--VGYSGELGDGTNSLRTTPAPINGLTGITAISAGWNHTLALKADG 154
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
L + G + GQLG T + + N + PG++ + G ++ I + G
Sbjct: 155 TLWSWGQNQYGQLG--TGNTTNSN----IPLQVPGQIGITSISSG----GGHSLVIKNDG 204
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ ++G NN+ QLG N+ TPH I L +++G HS AL S+G
Sbjct: 205 TVWSWGCNNFGQLGNGT-------NSNNPTPHQISGL--NGIINVSAGVIHSTALKSDGT 255
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + G L N + P+ + I +I G S AI S+G + WG+
Sbjct: 256 VWNWGCNFRGELANGN---KIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVN 312
Query: 372 NGYQLGNGKEDDI------------------------LNSEGKIYAFGRHDYGRL 402
+ QLGNG + D+ L ++G I+AFG + YG+L
Sbjct: 313 DYGQLGNGSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGNIFAFGENTYGQL 367
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 167/352 (47%), Gaps = 55/352 (15%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+ +SAG++ ++AL DGTV++WG ++ H +G +P++++ ++GI I++G
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGH--LGDGTTSNSNSPVQVKGLNGITAISAGWA 95
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-RKHIDDVFTG 241
HFV L S G + T G G+LG G + L P+ I + G
Sbjct: 96 HFVALKSDGTVWTWGVGYSGELG------------DGTNSLRTTPAPINGLTGITAISAG 143
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+T + + G++ ++G N Y QLG ++ + N P I T ++SG
Sbjct: 144 WNHTLALKADGTLWSWGQNQYGQLGTGNTT---NSNIPLQVPGQI------GITSISSGG 194
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HSL + ++G ++++G +++G+LG S PTP I +++ G S A+
Sbjct: 195 GHSLVIKNDGTVWSWGCNNFGQLGNGTNSN---NPTPHQISGLNGIINVSAGVIHSTALK 251
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGR 396
S+G ++ WG +L NG + D + S+G + +G
Sbjct: 252 SDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGV 311
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
+DYG+LG + S+ VT P + SL IT+I G + A+ ++G ++ +G
Sbjct: 312 NDYGQLGNGSKSD-VTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFG 360
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 150/330 (45%), Gaps = 63/330 (19%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
SG + +++G + L + G + + G + G LG T +++ P++
Sbjct: 35 SGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNS--------------PVQ 80
Query: 232 RKHIDDV--FTGVYNTFIS--SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
K ++ + + + F++ S G++ +G+ +LG+ + ++ TP I
Sbjct: 81 VKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRT-------TPAPING 133
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDK 344
L+ T +++G +H+LAL ++G ++++G++ YG+LG N + P+ P I
Sbjct: 134 LT--GITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG----- 186
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------- 383
ITSI+ G S I ++G ++ WG N QLGNG +
Sbjct: 187 -ITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGIINVSAGVI 245
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L S+G ++ +G + G L N + P+ + I +I G S AI S
Sbjct: 246 HSTALKSDGTVWNWGCNFRGELANGN---KIDSYIPVQANGLNGIIAITAGWEFSSAIKS 302
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+G + WG+ + QLGNG + D+ PM++
Sbjct: 303 DGTFWVWGVNDYGQLGNGSKSDVTSPMQVS 332
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G + GQLG G + T + L+ ++ V G +H+ L DG V+ WGCN
Sbjct: 204 GTVWSWGCNNFGQLGNGTN-SNNPTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCN 262
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G L + DS +IP N + I+AG S A+ DGT + WG + +G +G
Sbjct: 263 FRGELANGNKIDS-YIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWG--VNDYGQLGN 319
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ +P+++ S+SGI I +GA + V L + GN+ G GQL
Sbjct: 320 GSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGNIFAFGENTYGQL 367
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 172/356 (48%), Gaps = 52/356 (14%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLE----SVSGIVKIASGADHFVMLTSRGNLLTA 196
VY WG+ HG +GL G ++ L E S + + A G H ++LT G L +
Sbjct: 3 VYCWGN--TVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG T ++ + S L+ + V G ++ +++ G + +
Sbjct: 61 GNNDHGQLGHDTDCLPNKRPQFISS--------LENYIVTHVSCGTTHSLALTNWGQVFS 112
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N+ QLG D+++Q + TP +IK+++ K +ASGQ HSLAL + G+++++
Sbjct: 113 WGSNSIGQLGH-DTDLQT-----YTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSW 166
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G + YG+LGL E V PT + SL I IACG SFA+ G ++GW
Sbjct: 167 GANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW------- 219
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
G++ +G+LGL ++ P + +L++ + I+CG+ S
Sbjct: 220 -------------------GKNTFGQLGLNDLVSRCF-PQQLKTLRNLGVRYISCGDDFS 259
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ EG ++ G G QLG+G ++IL M E L + Q+A G +H++
Sbjct: 260 AFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVFE---LMGSKITQIACGRRHTL 312
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 46/325 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFA 63
+Q P + + S +V C T ++LT CG D GQLG D + K
Sbjct: 22 EQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQ 81
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--P 119
+ L+N V V G H++ LT G+V++WG N G LG + + + P+ +
Sbjct: 82 FISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIAT 141
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL--KGEGIQKTPLKLESVSG--IV 175
K VQI++G HS+AL G +++WG+ + +G +GL GE + TP ++S++G I
Sbjct: 142 KTVVQIASGQFHSLALTNSGELFSWGA--NGYGQLGLGTTGEKV-VTPTLVKSLAGIPIA 198
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVP 229
IA G +H ++ G + G GQLG R + G+ ++ G
Sbjct: 199 FIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCG--- 255
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
DD ++ F++ +G + G + QLG + P ++ L
Sbjct: 256 ------DD-----FSAFLTQEGGVFTCGAGTFGQLGHGTCSNE-------ILPRMVFELM 297
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIY 313
K T +A G+ H+LA S GKIY
Sbjct: 298 GSKITQIACGRRHTLAFVPSRGKIY 322
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 44/346 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTW 93
V G G+LGLG +E + L ++D +V + G HT+ LT+DGK+++
Sbjct: 3 VYCWGNTVHGELGLGG--IEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSC 60
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ND G LG + + PQ ++ + + +S G +HS+AL G V++WGS +S
Sbjct: 61 GNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGS--NSI 118
Query: 152 GSMGLKGE-GIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-- 206
G +G + TP +++++ +V+IASG H + LT+ G L + G GQLG
Sbjct: 119 GQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGT 178
Query: 207 -----ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
+T A ++F+ G G ++ +S G+I +G N +
Sbjct: 179 TGEKVVTPTLVKSLAGIPIAFIACG--------------GNHSFAVSKSGAIFGWGKNTF 224
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D + CF P +K+L + ++ G S L EG ++ G +G
Sbjct: 225 GQLGLND-----LVSRCF--PQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFG 277
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLY 366
+LG S + P + L IT IACG + A + S G +Y
Sbjct: 278 QLGHGTCSNEIL-PRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ ++ G + + G N++ QLG D++ + P I SL + T ++ G H
Sbjct: 47 HTLLLTKDGKLFSCGNNDHGQLGH-DTDCLPNKR-----PQFISSLENYIVTHVSCGTTH 100
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
SLAL + G+++++G + G+LG + T P I ++ KT+ IA G S A+ +
Sbjct: 101 SLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNS 160
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G L+ WG NG YG+LGL E V PT + SL
Sbjct: 161 GELFSWG-ANG-------------------------YGQLGLGTTGEKVVTPTLVKSLAG 194
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
I IACG SFA+ G ++GWG QLG P ++ K L N V +
Sbjct: 195 IPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQL--KTLRNLGVRYI 252
Query: 483 ASGGQHSVILAK 494
+ G S L +
Sbjct: 253 SCGDDFSAFLTQ 264
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 32/356 (8%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V TCGQ G+LG D RKT LV+ + VV+V G HTV L G+VYT G N
Sbjct: 233 VWTCGQNSYGELGHS-DTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYN 291
Query: 97 DEGALGREAEGDSEFIPQTVNLP----KKAVQISA--GDSHSVALLEDGTVYAWGSFRDS 150
D G G +G ++ + +P +KAVQ+ A G H++ +L+DG + ++G +
Sbjct: 292 DNGQCG---QGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGY--NY 346
Query: 151 HGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +G + P + ++GI + + H V+ G + T G + GQLG
Sbjct: 347 RGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLG--- 403
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS-KGSILAFGLNNYSQLGEA 267
S R+ +E L+ + I + G Y+T +S+ + + + G N+Y QLG
Sbjct: 404 --SGDVIDRKLPCLVES----LRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLE 457
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+E Q+ F + L + + G +H++ L +E ++ FGR+DYG+LGL +
Sbjct: 458 STESQRK----FVA--VKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGH 511
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
++ V PT I Q+K + I+ G + ID++G+L+ +G + QLG G ++
Sbjct: 512 TTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNE 567
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 59/385 (15%)
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQ 201
W ++S+G +G G +KT ++ G +V +A+G +H V+L S G + TAG +
Sbjct: 234 WTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYNDN 293
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLK--RKHID-DVFTGVYNTFIS-SKGSILAFG 257
GQ G+ T + R VP+ RK + + G +T + G +++FG
Sbjct: 294 GQCGQGTTQRVGVLTR----------VPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFG 343
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N QLG+ ++ + P ++ L+ + T + +HS+ G++Y FGR
Sbjct: 344 YNYRGQLGQGNTSSEP-------VPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGR 396
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+D+G+LG +V + P + SL+ + IT++ACG + E + G + QLG
Sbjct: 397 NDFGQLGSGDVIDRKL-PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLG 455
Query: 378 -------------NGKEDD--------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
GK D +L +E ++ FGR+DYG+LGL + ++
Sbjct: 456 LESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQR 515
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V PT I Q+K + I+ G + ID++G+L+ +G + QLG G ++ P +
Sbjct: 516 VFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVS 575
Query: 471 ---GKQLNNYTVLQVASGGQHSVIL 492
GK+ + +VA+G H+++L
Sbjct: 576 TFLGKR-----IAKVAAGFYHTIVL 595
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 34/334 (10%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-----VVEVVVGGMHTVCL 84
L C TG V T G D GQ G G +R +D V G HT+ +
Sbjct: 278 LLCSTGE--VYTAGYNDNGQCGQG--TTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVV 333
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVY 142
+DG++ ++G N G LG + SE +P+ V + Q S HSV ++G VY
Sbjct: 334 LDDGQMMSFGYNYRGQLG-QGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVY 392
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
+G R+ G +G +K P +ES+ G I +A G H V+ T + + G +
Sbjct: 393 TFG--RNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKND 450
Query: 201 QGQLGRITQRSASR-NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGL 258
GQLG + S + A +G L + V G Y+T + +++ + FG
Sbjct: 451 YGQLGLESTESQRKFVAVKGK---------LDGAQVRHVRCGYYHTIVLTAEEHVFGFGR 501
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N+Y QLG + + F P +I+ +K +++G +H++ ++++G ++ FGR+
Sbjct: 502 NDYGQLGLGHTTQR------VFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRN 555
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+G+LG + +E + P P+ + K I +A G
Sbjct: 556 HHGQLGTGDTNERHS-PFPVSTFLGKRIAKVAAG 588
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V +CG+ D GQLGL +RK A+ LD V V G HT+ LT + V+ +G N
Sbjct: 443 VQSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRN 502
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
D G LG F P + K +ISAG H+V + DG ++ +G R+ HG +
Sbjct: 503 DYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFG--RNHHGQL 560
Query: 155 GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
G + +P + + G I K+A+G H ++LT
Sbjct: 561 GTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 186/376 (49%), Gaps = 42/376 (11%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVV 75
VFV + T+ C G GQ G+ + V E + + D +V EV
Sbjct: 445 VFVDVSWIRTMLC---------WGYWSLGQPGISSNLQGIVAEPQVCGFIAD-RSVKEVA 494
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSV 133
GG H+V L EDG+VYT G N +G LG E EG+ P+ + + V ++ G+SHS+
Sbjct: 495 CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSL 551
Query: 134 ALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSR 190
AL + G +++WG+ D G +GL E P ++ ++ I++++ G H + L +
Sbjct: 552 ALSDRGQLFSWGAGSD--GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 609
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISS 249
G T G GQLG + + S+ + + + LE +PL + V G ++F +S
Sbjct: 610 GQFFTWGKNSHGQLG-LGKEFPSQTSPQRVRSLE--GIPLAQ-----VAAGGAHSFALSL 661
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ +G+NN QLG +D + ++S P +K L +K ++ G+ H+ L
Sbjct: 662 SGAVFGWGMNNAGQLGLSDEKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKS 714
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGW 368
G ++ FG G+LG ++++ V P + L +T IACG + A + S G++Y +
Sbjct: 715 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 773
Query: 369 GMGNGYQLGNGKEDDI 384
G G QLG G ++
Sbjct: 774 GCGARGQLGTGHTCNV 789
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 173/402 (43%), Gaps = 61/402 (15%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
T+ WG + + +GI P ++ + ++A G +H V L G + T G
Sbjct: 454 TMLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCG 513
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+GQLG +R ++ + G L +HI V G ++ +S +G + ++
Sbjct: 514 LNTKGQLGH--EREGNKPEQIGA---------LADQHIVHVACGESHSLALSDRGQLFSW 562
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G
Sbjct: 563 GAGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 616
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ +G+LGL T P + SL+ + +A G SFA+ G ++GWGM N QL
Sbjct: 617 KNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 676
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D +L G ++ FG G+LG ++++
Sbjct: 677 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 736
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G++Y +G G QLG G ++ P +
Sbjct: 737 VN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 795
Query: 470 EG-------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+G + + V Q+ SGG + +L N
Sbjct: 796 KGYWAAHSGQLSARADRCKYHIVKQIFSGGDQTFVLCSKYEN 837
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + D ++V V G H++ L++ G++++WG
Sbjct: 507 GEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHIVHVACGESHSLALSDRGQLFSWGAG 565
Query: 97 DEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG DS +P+ + L ++ + Q+S G+ H +AL DG + WG ++SHG +
Sbjct: 566 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG--KNSHGQL 623
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P ++ S+ GI ++A+G H L+ G + G GQLG ++
Sbjct: 624 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 683
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 684 RE----------SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 733
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+ EV P + L + T +A G+ H+LA S G IYAFG G+LG
Sbjct: 734 NDEV---------NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 784
Query: 327 NVSEPVTEPTPI 338
+ V P+P+
Sbjct: 785 HTCN-VKCPSPV 795
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 207/446 (46%), Gaps = 70/446 (15%)
Query: 43 GQGDTGQLGLGPDVMER-KTFALVEDLD---NVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
G+ GQLG+G E T L+E+L+ NV EV G HT L +DG VYT G N+
Sbjct: 5 GKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEF 64
Query: 99 GALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG+E + P++V+ + +++ G +H+VA+ + G V+AWG +S+G +GL
Sbjct: 65 GQLGQEKSHTN---PESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGD--NSYGQIGL 119
Query: 157 KG---EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQR 210
E +Q P L+ ++ +V+IA G +H + LT G+L G GQLG T
Sbjct: 120 GSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS 179
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
S S A L VP G ++ +SS G++ +G N Y QLG D+
Sbjct: 180 SMSEPA----PVLSLNGVPFMLISAG----GAHSFALSSSGALFGWGKNEYGQLGVHDTT 231
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ P L+KSL + ++ G+ H+ L S+G ++ FG G+LG N +
Sbjct: 232 DRP-------LPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG-HNSNH 283
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK 390
P + L +T IACG + A ++ S G+
Sbjct: 284 HEYTPRKVFELMGSVVTQIACGRAHTLA-------------------------LVPSSGR 318
Query: 391 IYAFGRHDYGRLGL---KNVSEPVTEPTP-IPSLQDKTITSIACGNCVSFA---IDSEGV 443
+Y FGR G+LGL N + P+T P + S K++ A G+ V + ID+ G
Sbjct: 319 VYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYTVRRIDAGGD 378
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKI 469
+ + M + Y G E D E M++
Sbjct: 379 -HCFAMASSY----GDETDGPEDMRL 399
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 172/400 (43%), Gaps = 63/400 (15%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRGNLLTAG 197
++ WG + +G + TP LE++ S + +++ G +H L G + T G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
E GQLG+ + + +F I V G +T +S +G + A+
Sbjct: 61 SNEFGQLGQEKSHTNPESVHAIETFT-----------ITKVTCGKAHTVAVSDQGLVFAW 109
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N+Y Q+G S+V++ T P ++K L+ +A G +HS+AL G ++ +G
Sbjct: 110 GDNSYGQIG-LGSKVKEKVQT---IPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWG 165
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ G+LG+ ++EP P+ SL I+ G SFA+ S G L+GWG QL
Sbjct: 166 DNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQL 225
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G D +L S+G ++ FG G+LG N +
Sbjct: 226 GVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG-HNSNHH 284
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
P + L +T IACG + A + S G +Y +G G QLG G ++ PM
Sbjct: 285 EYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTA 344
Query: 470 EGKQL--NN--------------YTVLQVASGGQHSVILA 493
+G L NN YTV ++ +GG H +A
Sbjct: 345 KGPWLRSNNIKSMLPEADGDSVVYTVRRIDAGGDHCFAMA 384
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 164/346 (47%), Gaps = 44/346 (12%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
CK G V TCG + GQLG ++ +E + +V G HTV +++ G V+
Sbjct: 51 CK--DGTVYTCGSNEFGQLGQEKSHTNPESVHAIETF-TITKVTCGKAHTVAVSDQGLVF 107
Query: 92 TWGCNDEGA--LGREAEGDSEFIPQTVN-LPKKA-VQISAGDSHSVALLEDGTVYAWGSF 147
WG N G LG + + + IP+ + L K + VQI+ G +HS+AL G ++ WG
Sbjct: 108 AWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGD- 166
Query: 148 RDSHGSMGL-KGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+S G +G+ K P + S++G+ + I++G H L+S G L G E GQL
Sbjct: 167 -NSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQL 225
Query: 205 G--RITQR---SASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
G T R + ++ R +G+ ++ GE KH ++S G + FG
Sbjct: 226 GVHDTTDRPLPTLLKSLRSQGVCYVSCGE-----KH---------TAVLTSDGGVFTFGC 271
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGR 317
QLG + N +TP + L T +A G+ H+LAL S G++Y FGR
Sbjct: 272 GTSGQLGH-------NSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGR 324
Query: 318 HDYGRLGL---KNVSEPVTEPTP-IPSLQDKTITSIACGNCVSFAI 359
G+LGL N + P+T P + S K++ A G+ V + +
Sbjct: 325 GGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYTV 370
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGDHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EEDRES-------PCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 171/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G DH V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADEHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEESVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E+D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D +++
Sbjct: 30 FISDRSVKEVAC--GGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-EHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG +S +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRAQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|156049653|ref|XP_001590793.1| hypothetical protein SS1G_08533 [Sclerotinia sclerotiorum 1980]
gi|154692932|gb|EDN92670.1| hypothetical protein SS1G_08533 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 611
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 152/315 (48%), Gaps = 46/315 (14%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+ G + G+LGLG D + R VV++V GGMH LT+D K+ TWG
Sbjct: 194 IYVFGCNEAGELGLGLQTKKDTINRPVKNPALTALGVVQMVAGGMHGAALTKDNKILTWG 253
Query: 95 CNDEGALGREAE-----------------------GDSEFIPQTV---NLPKKAV--QIS 126
+D ALGR+ + E P V N+P+ + QI+
Sbjct: 254 VSDGLALGRKTDDWVAPERDADADSDDESDAADARNPLESTPGEVDMTNVPEGTIFTQIT 313
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHF 184
AGD+ + AL DG VY WGS R + G MG + +++T P+ + + IVK+A+G +H+
Sbjct: 314 AGDNATYALTNDGLVYGWGSIRGADGPMGFTKD-VKETLVPMLIPGLKNIVKLAAGNNHY 372
Query: 185 VMLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L ++G++ G E QLG RI +RS ++ L P E L + + D+F G
Sbjct: 373 LALNNKGSVFAWGAGEHNQLGRRIVERSR-------LNALVPREFGLPKAMV-DIFCGSE 424
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++F + G++ ++G NN Q G+ + T + L K M+A+G
Sbjct: 425 HSFALHKNGTVYSWGANNMGQCGQFTKD-GALAEEVTSTATKVDILKGKNIKMMAAGNAS 483
Query: 303 SLALNSEGKIYAFGR 317
SLAL EG++ FG+
Sbjct: 484 SLALTHEGEVMYFGK 498
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSI 349
FT + +G + + AL ++G +Y +G R G +G K+V E + P IP L K I +
Sbjct: 309 FTQITAGDNATYALTNDGLVYGWGSIRGADGPMGFTKDVKETLV-PMLIPGL--KNIVKL 365
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
A GN A++++G ++ WG G QLG + ++ A ++G
Sbjct: 366 AAGNNHYLALNNKGSVFAWGAGEHNQLGRR-----IVERSRLNALVPREFG--------- 411
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+P K + I CG+ SFA+ G +Y WG N Q G +D L
Sbjct: 412 -------LP----KAMVDIFCGSEHSFALHKNGTVYSWGANNMGQCGQFTKDGAL 455
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 169/430 (39%), Gaps = 87/430 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLL 194
+Y +G + G +GL K + I + P+K +++ G+V++ +G H LT +L
Sbjct: 194 IYVFGC--NEAGELGLGLQTKKDTINR-PVKNPALTALGVVQMVAGGMHGAALTKDNKIL 250
Query: 195 TAGCPEQGQLGRITQ------------RSASRNARRGMSFLE--PGEVPLKRKHIDDVFT 240
T G + LGR T +A + LE PGEV + +FT
Sbjct: 251 TWGVSDGLALGRKTDDWVAPERDADADSDDESDAADARNPLESTPGEVDMTNVPEGTIFT 310
Query: 241 GVYNTFISSKGSILAFGLNN------YSQLGEADSEVQKSGNTC-FFTPHLIKSLSDKKF 293
+ + G + L N + + AD + + + P LI L K
Sbjct: 311 QI------TAGDNATYALTNDGLVYGWGSIRGADGPMGFTKDVKETLVPMLIPGL--KNI 362
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG 352
LA+G +H LALN++G ++A+G ++ +LG + V + P K + I CG
Sbjct: 363 VKLAAGNNHYLALNNKGSVFAWGAGEHNQLGRRIVERSRLNALVPREFGLPKAMVDIFCG 422
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKED--------------DILN------------ 386
+ SFA+ G +Y WG N Q G +D DIL
Sbjct: 423 SEHSFALHKNGTVYSWGANNMGQCGQFTKDGALAEEVTSTATKVDILKGKNIKMMAAGNA 482
Query: 387 ------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-----KTITS-------I 428
EG++ FG+ G G + E + E I + +D KT S I
Sbjct: 483 SSLALTHEGEVMYFGKALDGLSG--HDVEALPEDVIIRNERDQRSIIKTPLSFPFKGSYI 540
Query: 429 ACGNCVSFAIDSEG--VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
A G+ S + EG + WG Q G + D+ ++ K + ++ A GG
Sbjct: 541 AMGSDHSIVLGPEGKSPHHSWGFNTYRQTGLENDQDVYIAEELNNKNIEGKKLVWAAGGG 600
Query: 487 QHSVILAKPK 496
Q + + P+
Sbjct: 601 QFTFLAGIPE 610
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIP 339
P ++K +K T++ L IY FG ++ G LGL + + + P P
Sbjct: 170 PKIVKPKVEKPKTIINVAPTQLL------DIYVFGCNEAGELGLGLQTKKDTINRPVKNP 223
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+L + + G A+ + + WG+ +G LG K DD + E A +
Sbjct: 224 ALTALGVVQMVAGGMHGAALTKDNKILTWGVSDGLALGR-KTDDWVAPERDADADSDDES 282
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTI-TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+N E + ++ + TI T I G+ ++A+ ++G++YGWG G G
Sbjct: 283 DAADARNPLESTPGEVDMTNVPEGTIFTQITAGDNATYALTNDGLVYGWGSIRGADGPMG 342
Query: 459 KEDDILE---PMKIEGKQLNNYTVLQVASGGQHSVIL 492
D+ E PM I G L N ++++A+G H + L
Sbjct: 343 FTKDVKETLVPMLIPG--LKN--IVKLAAGNNHYLAL 375
>gi|406991558|gb|EKE11048.1| hypothetical protein ACD_15C00149G0001, partial [uncultured
bacterium]
Length = 1643
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 240/525 (45%), Gaps = 97/525 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-------VEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ GQLG + + K + + VE L +V + G + + + DG
Sbjct: 322 GTVWSWGKNTVGQLG--DNTIVEKHYPVQVLGVGGVEFLSSVASISAGASYALAVKSDGT 379
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV-------NLPKKAVQISAGDSHSVALLEDGTVY 142
V WG ND G LG + DS ++P V NL + +SA +HS++L DGTV+
Sbjct: 380 VVAWGKNDSGQLGNNSYADS-YVPVQVLGVDGMGNL-SSIISVSADGTHSLSLKSDGTVW 437
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG------IVKIASGADHFVMLTSRGNLLTA 196
+WG ++ G +G+ +KTP+++ +G IV IA+G + + + G +
Sbjct: 438 SWG--KNDKGQLGINSFIDKKTPVQVLDSTGTGFLTDIVSIATGNKFSLAVKNDGKAWSW 495
Query: 197 GCPEQGQLG--RITQRS---------ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
G GQLG +T+RS A+ N + +SF++ G D + + T
Sbjct: 496 GYDSTGQLGDNALTERSLPFQILDTGATGNLSQ-VSFIDGG----------DGYAVAFKT 544
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
S GS+ ++G N+ QLG + ++ + + + ++ D + ++SG++H++A
Sbjct: 545 --DSDGSVWSWGKNDKGQLGNNTVDPVRTPISTWGPAN--GNIPDVQ--SVSSGRYHTIA 598
Query: 306 LNSEGKIYAFGRHDYGRLGL---KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
L ++G ++ +G + G+LG +N P+ P + I +A G+ S A S+
Sbjct: 599 LKTDGTVWDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHSLARRSD 658
Query: 363 GVLYGWGMGNGYQLGNGK-----------------------------EDD--ILNSEGKI 391
G ++ WG G+ +LG+G ED L S+G +
Sbjct: 659 GTVWAWGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTV 718
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD----KTITSIACGNCVSFAIDSEGVLYGW 447
+A+G++D G+LG N + P + + ++SI+ G+ ++G ++ W
Sbjct: 719 WAWGKNDRGQLG-DNSTNYKNLPVQVLGVGGAGFLNNVSSISAGSNFVLVAKNDGTVFSW 777
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G QLG+ L P+++ LN V +++G HS+ L
Sbjct: 778 GHNANGQLGDNTVSGKLTPIQV----LNINNVSSISAGYAHSLAL 818
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 225/526 (42%), Gaps = 98/526 (18%)
Query: 37 GVVLTCGQGDTGQLG-------------LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
G V+ G+ D+GQLG LG D M +L +++ V G H++
Sbjct: 378 GTVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMG--------NLSSIISVSADGTHSLS 429
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-----LPKKAVQISAGDSHSVALLED 138
L DG V++WG ND+G LG + D + Q ++ V I+ G+ S+A+ D
Sbjct: 430 LKSDGTVWSWGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLTDIVSIATGNKFSLAVKND 489
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-----VKIASGADHFVM---LTSR 190
G ++WG DS G +G + P ++ V G D + + S
Sbjct: 490 GKAWSWG--YDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSD 547
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP--GEVPLKRKHIDDVFTGVYNTF-I 247
G++ + G ++GQLG T R +S P G +P + V +G Y+T +
Sbjct: 548 GSVWSWGKNDKGQLGNNTVDP----VRTPISTWGPANGNIP----DVQSVSSGRYHTIAL 599
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD----KKFTMLASGQHHS 303
+ G++ +G N QLG + + TP ++ + +A+G +HS
Sbjct: 600 KTDGTVWDWGGNGNGQLGTTAGQNR-------LTPIQVRGPGGFGNLENIVEVAAGDYHS 652
Query: 304 LALNSEGKIYAFGRHDYGRLG----LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
LA S+G ++A+GR G LG + PV + + +I+ G S A+
Sbjct: 653 LARRSDGTVWAWGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVAL 712
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD------------------------------ILNSEG 389
S+G ++ WG + QLG+ + + ++G
Sbjct: 713 RSDGTVWAWGKNDRGQLGDNSTNYKNLPVQVLGVGGAGFLNNVSSISAGSNFVLVAKNDG 772
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
++++G + G+LG VS + TPI L ++SI+ G S A+ ++G ++ WG
Sbjct: 773 TVFSWGHNANGQLGDNTVSGKL---TPIQVLNINNVSSISAGYAHSLALKTDGSVWSWGW 829
Query: 450 GNGYQLGNGKE-DDILEPMKIEGKQLNNY--TVLQVASGGQHSVIL 492
QLG G D+ L P++++ + + ++A+G H +++
Sbjct: 830 NGNGQLGEGTNIDNSLLPLQVKNSTGTGFLSDISKIATGSNHCLVM 875
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 229/501 (45%), Gaps = 108/501 (21%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVED------LDNVVEVVVGGMHTVCLTEDGKVYT 92
V + G+ +GQLG +++R T V L+++ V G H++ L DG V++
Sbjct: 212 VWSWGENTSGQLG-DKTLIDRYTPVQVVGAGGSGYLNDIEMVSAGTNHSLALKSDGTVWS 270
Query: 93 WGCNDEGALGREAEGDSEFIPQTV-----NLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
WG ND G LG Q V + + +SAG+ +S+AL DGTV++WG
Sbjct: 271 WGNNDNGQLGNNLVSLKNIPVQVVGPGGIGVLSNVISVSAGEGYSLALKSDGTVWSWG-- 328
Query: 148 RDSHGSMGLKGEGIQKTPLK------LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+++ G +G + P++ +E +S + I++GA + + + S G ++ G +
Sbjct: 329 KNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGASYALAVKSDGTVVAWGKNDS 388
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----------FTGVYNTFISSKG 251
GQLG N S+ VP++ +D + G ++ + S G
Sbjct: 389 GQLG---------NNSYADSY-----VPVQVLGVDGMGNLSSIISVSADGTHSLSLKSDG 434
Query: 252 SILAFGLNNYSQLG-------EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ ++G N+ QLG + +V S T F T +A+G SL
Sbjct: 435 TVWSWGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLT----------DIVSIATGNKFSL 484
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSE 362
A+ ++GK +++G G+LG ++E SL + + + A GN VSF ID
Sbjct: 485 AVKNDGKAWSWGYDSTGQLGDNALTE--------RSLPFQILDTGATGNLSQVSF-IDG- 534
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP------ 416
G+GY + + D G ++++G++D G+LG N +PV P
Sbjct: 535 --------GDGYAVAFKTDSD-----GSVWSWGKNDKGQLG-NNTVDPVRTPISTWGPAN 580
Query: 417 --IPSLQDKTITSIACGNCVSFAIDSEGVLYGW-GMGNGYQLGNGKEDDILEPMKIEGK- 472
IP +Q S++ G + A+ ++G ++ W G GNG QLG + L P+++ G
Sbjct: 581 GNIPDVQ-----SVSSGRYHTIALKTDGTVWDWGGNGNG-QLGTTAGQNRLTPIQVRGPG 634
Query: 473 ---QLNNYTVLQVASGGQHSV 490
L N +++VA+G HS+
Sbjct: 635 GFGNLEN--IVEVAAGDYHSL 653
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 191/447 (42%), Gaps = 62/447 (13%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-----QI 125
V + G + + D V++WG N G LG + D Q V +
Sbjct: 193 VAAISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLNDIEMV 252
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES------VSGIVKIAS 179
SAG +HS+AL DGTV++WG + +G +G ++ P+++ +S ++ +++
Sbjct: 253 SAGTNHSLALKSDGTVWSWG--NNDNGQLGNNLVSLKNIPVQVVGPGGIGVLSNVISVSA 310
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G + + L S G + + G GQLG T + L G V
Sbjct: 311 GEGYSLALKSDGTVWSWGKNTVGQLGDNTIVEK----HYPVQVLGVGGVEFLSSVASISA 366
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGE---ADS--EVQKSGNTCFFTPHLIKSLSDKKFT 294
Y + S G+++A+G N+ QLG ADS VQ G I S+S
Sbjct: 367 GASYALAVKSDGTVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLSSIISVS----- 421
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-------IT 347
A G H SL+L S+G ++++G++D G+LG+ + + + TP+ L D T I
Sbjct: 422 --ADGTH-SLSLKSDGTVWSWGKNDKGQLGINSF---IDKKTPVQVL-DSTGTGFLTDIV 474
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
SIA GN S A+ ++G + WG + QLG D+ L + F D G G
Sbjct: 475 SIATGNKFSLAVKNDGKAWSWGYDSTGQLG----DNALTE--RSLPFQILDTGATG---- 524
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
+L + G V+F DS+G ++ WG + QLGN D + P+
Sbjct: 525 -----------NLSQVSFIDGGDGYAVAFKTDSDGSVWSWGKNDKGQLGNNTVDPVRTPI 573
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
G N +Q S G++ I K
Sbjct: 574 STWGPANGNIPDVQSVSSGRYHTIALK 600
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 131/580 (22%), Positives = 237/580 (40%), Gaps = 134/580 (23%)
Query: 15 NPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVED------L 68
N S + V+++ +L K+ G V + G+ D GQLG+ +++KT V D L
Sbjct: 413 NLSSIISVSADGTHSLSLKSDG-TVWSWGKNDKGQLGINS-FIDKKTPVQVLDSTGTGFL 470
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQ------TVNLPKKA 122
++V + G ++ + DGK ++WG + G LG A + Q T NL + +
Sbjct: 471 TDIVSIATGNKFSLAVKNDGKAWSWGYDSTGQLGDNALTERSLPFQILDTGATGNLSQVS 530
Query: 123 VQISAGDSHSVALL--EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE-----SVSGIV 175
I GD ++VA DG+V++WG ++ G +G +TP+ ++ +
Sbjct: 531 F-IDGGDGYAVAFKTDSDGSVWSWG--KNDKGQLGNNTVDPVRTPISTWGPANGNIPDVQ 587
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
++SG H + L + G + G GQLG +A +N + PG ++I
Sbjct: 588 SVSSGRYHTIALKTDGTVWDWGGNGNGQLGT----TAGQNRLTPIQVRGPGGFG-NLENI 642
Query: 236 DDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF- 293
+V G Y++ S G++ A+G + +LG+ + + P +K + F
Sbjct: 643 VEVAAGDYHSLARRSDGTVWAWGRGSLGELGDGTWISTR------YNPVQVKDAAGTGFL 696
Query: 294 ---TMLASGQHHSLALNSEGKIYAFGRHDYGRLG---------------------LKNVS 329
+++G+ +S+AL S+G ++A+G++D G+LG L NVS
Sbjct: 697 TNVVAISAGEDYSVALRSDGTVWAWGKNDRGQLGDNSTNYKNLPVQVLGVGGAGFLNNVS 756
Query: 330 EPVT--------------------------------EPTPIPSLQDKTITSIACGNCVSF 357
+ TPI L ++SI+ G S
Sbjct: 757 SISAGSNFVLVAKNDGTVFSWGHNANGQLGDNTVSGKLTPIQVLNINNVSSISAGYAHSL 816
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDD-------------------------------ILN 386
A+ ++G ++ WG QLG G D ++
Sbjct: 817 ALKTDGSVWSWGWNGNGQLGEGTNIDNSLLPLQVKNSTGTGFLSDISKIATGSNHCLVMK 876
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT------ITSIACGNCVSFAI-D 439
S+ +A+G + G+LG ++ V + P+ L ++ + G S I
Sbjct: 877 SDNTAFAWGLNGNGQLGNNSI---VNKNLPVQVLNSNGSSGFTGVSFVEAGFANSTIIKS 933
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
S+ +++ WG+ + +LGN + D L P+ + G N V
Sbjct: 934 SDSLVWNWGINSYGELGNNRVDGTLLPVSVWGSASGNMKV 973
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 153/353 (43%), Gaps = 77/353 (21%)
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR----GMSFLEP 225
S SG+ I++G + + S ++ + G GQLG T + G +L
Sbjct: 189 SFSGVAAISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYL-- 246
Query: 226 GEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE-----ADSEVQKSGNTCF 279
I+ V G ++ + S G++ ++G N+ QLG + VQ G
Sbjct: 247 -------NDIEMVSAGTNHSLALKSDGTVWSWGNNDNGQLGNNLVSLKNIPVQVVG---- 295
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P I LS+ +++G+ +SLAL S+G ++++G++ G+LG + E + P+
Sbjct: 296 --PGGIGVLSN--VISVSAGEGYSLALKSDGTVWSWGKNTVGQLGDNTIVE---KHYPVQ 348
Query: 340 SLQD------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
L ++ SI+ G + A+ S+G + WG + QLGN D
Sbjct: 349 VLGVGGVEFLSSVASISAGASYALAVKSDGTVVAWGKNDSGQLGNNSYADSYVPVQVLGV 408
Query: 384 --------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
L S+G ++++G++D G+LG+ + + + TP+ L D
Sbjct: 409 DGMGNLSSIISVSADGTHSLSLKSDGTVWSWGKNDKGQLGINSF---IDKKTPVQVL-DS 464
Query: 424 T-------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
T I SIA GN S A+ ++G + WG + QLG+ + P +I
Sbjct: 465 TGTGFLTDIVSIATGNKFSLAVKNDGKAWSWGYDSTGQLGDNALTERSLPFQI 517
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VTAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 169/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + + G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++ +G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKNGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 175/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVM----ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+G ++ E + + + D NV EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHD-RNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG + EG P+ + + V ++ G+SHSVAL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHDCEGSK---PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSD--G 114
Query: 153 SMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G N+ QLG +D
Sbjct: 175 CPSQASPQRVKSL---DGIPLAQ-----VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 ERDRES-------PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L ++ IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 61/367 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKR 232
+ ++A G +H V L G + T G +GQLG + S +P ++ L
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS------------KPEQIGALAG 83
Query: 233 KHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+HI V G ++ +S +G + ++G + QLG E + P LIK L+ +
Sbjct: 84 QHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVT------VPRLIKKLNQQ 137
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++ G H LAL ++G+ + +G++ YG+LGL P + SL + +A
Sbjct: 138 TILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAA 197
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G SFA+ G ++GWG + QLG E D +L
Sbjct: 198 GGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVL 444
G ++ FG G+LG ++++ V P + L ++ IACG + A + S G++
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGK------QLNN-------YTVLQVASGGQHSVI 491
Y +G G QLG G ++ P ++G QL+ + V + SGG + +
Sbjct: 317 YAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFV 376
Query: 492 LAKPKPN 498
L N
Sbjct: 377 LCSKYEN 383
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + ++V V G H+V L++ G++++WG
Sbjct: 53 GEVYTCGLNTKGQLGHDCEGSKPEQIGALAG-QHIVHVACGESHSVALSDQGQLFSWGAG 111
Query: 97 DEGALGREAEGDSEFIPQTV-NLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG D+ +P+ + L ++ + Q+S G+ H +AL DG + WG ++S+G +
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWG--QNSYGQL 169
Query: 155 GLKGEG-IQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P +++S+ GI ++A+G H L+ G + G GQLG +R
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 230 RE----------SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+ EV P + L + + +A G+HH+LA S G IYAFG G+LG
Sbjct: 280 NDEV---------NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 327 NVSEPVTEPTPI 338
+ V P+P+
Sbjct: 331 HTCN-VKCPSPV 341
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 312 IYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G YG+ G+ N+ + EP + D+ + +ACG S + +G +Y G+
Sbjct: 1 MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 371 GNGYQLGN----GKEDDI--------------------LNSEGKIYAFGRHDYGRLGLKN 406
QLG+ K + I L+ +G+++++G G+LGL
Sbjct: 61 NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+ + VT P I L +TI ++CGN A+ ++G + WG + QLG GKE
Sbjct: 121 IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ K L+ + QVA+GG HS L+
Sbjct: 181 PQRV--KSLDGIPLAQVAAGGAHSFALS 206
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 157/355 (44%), Gaps = 49/355 (13%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
+ V G T+ L DG V++WG N G LG +S P V ISAG +H
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNS-PVQVKGLNGITAISAGWAH 96
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
VAL DGTV+ WG G +G ++ TP + ++GI I++G +H + L + G
Sbjct: 97 FVALKSDGTVWTWG--VGYSGELGDGTNSLRTTPAPINGLTGITAISAGWNHTLALKADG 154
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
L + G + GQLG + PG++ + G ++ I + G
Sbjct: 155 TLWSWGQNQYGQLGT------GNTTNSNIPLQVPGQIGITSISSG----GGHSLVIKNDG 204
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ ++G NN+ QLG N+ TPH I L +++G HS AL S+G
Sbjct: 205 TVWSWGCNNFGQLGNGT-------NSNNPTPHQISGL--NGIINVSAGVIHSTALKSDGT 255
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + G L N + P+ + I +I G S AI S+G + WG+
Sbjct: 256 VWNWGCNFRGELANGN---KIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVN 312
Query: 372 NGYQLGNGKEDDI------------------------LNSEGKIYAFGRHDYGRL 402
+ QLGNG + D+ L ++G I+AFG + YG+L
Sbjct: 313 DYGQLGNGSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGNIFAFGENTYGQL 367
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 167/352 (47%), Gaps = 55/352 (15%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+ +SAG++ ++AL DGTV++WG ++ H +G +P++++ ++GI I++G
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGH--LGDGTTSNSNSPVQVKGLNGITAISAGWA 95
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-RKHIDDVFTG 241
HFV L S G + T G G+LG G + L P+ I + G
Sbjct: 96 HFVALKSDGTVWTWGVGYSGELG------------DGTNSLRTTPAPINGLTGITAISAG 143
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+T + + G++ ++G N Y QLG ++ + N P I T ++SG
Sbjct: 144 WNHTLALKADGTLWSWGQNQYGQLGTGNT---TNSNIPLQVPGQI------GITSISSGG 194
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HSL + ++G ++++G +++G+LG S PTP I +++ G S A+
Sbjct: 195 GHSLVIKNDGTVWSWGCNNFGQLGNGTNSN---NPTPHQISGLNGIINVSAGVIHSTALK 251
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGR 396
S+G ++ WG +L NG + D + S+G + +G
Sbjct: 252 SDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGV 311
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
+DYG+LG + S+ VT P + SL IT+I G + A+ ++G ++ +G
Sbjct: 312 NDYGQLGNGSKSD-VTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFG 360
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 150/330 (45%), Gaps = 63/330 (19%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
SG + +++G + L + G + + G + G LG T +++ P++
Sbjct: 35 SGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNS--------------PVQ 80
Query: 232 RKHIDDV--FTGVYNTFIS--SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
K ++ + + + F++ S G++ +G+ +LG+ + ++ TP I
Sbjct: 81 VKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRT-------TPAPING 133
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDK 344
L+ T +++G +H+LAL ++G ++++G++ YG+LG N + P+ P I
Sbjct: 134 LT--GITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG----- 186
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------- 383
ITSI+ G S I ++G ++ WG N QLGNG +
Sbjct: 187 -ITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGIINVSAGVI 245
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L S+G ++ +G + G L N + P+ + I +I G S AI S
Sbjct: 246 HSTALKSDGTVWNWGCNFRGELANGN---KIDSYIPVQANGLNGIIAITAGWEFSSAIKS 302
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+G + WG+ + QLGNG + D+ PM++
Sbjct: 303 DGTFWVWGVNDYGQLGNGSKSDVTSPMQVS 332
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G + GQLG G + T + L+ ++ V G +H+ L DG V+ WGCN
Sbjct: 204 GTVWSWGCNNFGQLGNGTN-SNNPTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCN 262
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G L + DS +IP N + I+AG S A+ DGT + WG + +G +G
Sbjct: 263 FRGELANGNKIDS-YIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWG--VNDYGQLGN 319
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ +P+++ S+SGI I +GA + V L + GN+ G GQL
Sbjct: 320 GSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGNIFAFGENTYGQL 367
>gi|324506789|gb|ADY42891.1| Regulator of chromosome condensation [Ascaris suum]
Length = 564
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 181/384 (47%), Gaps = 42/384 (10%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFAL--VEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G VL+CG+G+ QLG +K A+ + +V+VV GG+H++ L EDG VY+
Sbjct: 146 GDRVLSCGEGE--QLGHPGRTTTKKPRAIDTLPTDKKIVQVVAGGVHSLILLEDGTVYSC 203
Query: 94 GCNDEGAL---GREAEGDSEFI-----PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
G N++G + G E EG ++ + + K V ++AG S S L + G+V AWG
Sbjct: 204 GINEKGTVPADGVEPEGSTDRLTPINFSDEIRRHGKLVMLTAGASFSAGLTDKGSVVAWG 263
Query: 146 SFRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ RD+ GS+ +++ P+ + IVKIA+G +H VML+ G LLT G
Sbjct: 264 NIRDTSGSIETHHILREMERHPVVIVRHQHRVIVKIAAGENHLVMLSENGELLTFGDGSM 323
Query: 202 GQLGRITQRSASR---------NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKG 251
GQLGR+ + S R N R +S L+ G+ L +D+ G Y T ++ G
Sbjct: 324 GQLGRLGRVSHIRAQQMVDDSGNYLR-VSVLQKGKGKLVL--FEDIMAGGYWTAARANDG 380
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNT-------CFFTPHLIKSLSDKKFTMLASGQHHSL 304
I GLNN+ LG +V ++ P + + +KF L G H +
Sbjct: 381 RIFVCGLNNFGHLGIEPPDVDQNAKPGEGGPELRIMRPTESPAYAGRKFVQLC-GVQHMI 439
Query: 305 ALNSEGKIYAFGRHDYGRLGLKN-VSEPVTEPTPIPSLQDKTITSIACGNCV----SFAI 359
AL+ G ++ G++ LGL T+ L+ + + A G S A
Sbjct: 440 ALDENGDVFGIGKNTDNALGLGTWTGNDDTDHWRYTHLEKIELPTKAAGIAAKLGCSLAW 499
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+ EGV + WG QLG G +DD
Sbjct: 500 NKEGVAFSWGCDTSGQLGLGIKDD 523
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 169/415 (40%), Gaps = 65/415 (15%)
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
T+ KK VQ+ AG HS+ LLEDGTVY+ G + G++ G + + +L ++
Sbjct: 174 TLPTDKKIVQVVAGGVHSLILLEDGTVYSCGI--NEKGTVPADGVEPEGSTDRLTPINFS 231
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQL---GRITQRSASRNARRGMSFLEPGEVPLK 231
+I VMLT+ G +AG ++G + G I S S + +E V +
Sbjct: 232 DEIRRHGK-LVMLTA-GASFSAGLTDKGSVVAWGNIRDTSGSIETHHILREMERHPVVIV 289
Query: 232 RKHIDDVFTGV-----YNTFISSKGSILAFGLNNYSQLGE--------ADSEVQKSGNTC 278
R H V + + +S G +L FG + QLG A V SGN
Sbjct: 290 R-HQHRVIVKIAAGENHLVMLSENGELLTFGDGSMGQLGRLGRVSHIRAQQMVDDSGN-- 346
Query: 279 FFTPHLIKSLSDKK--FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-----NVSEP 331
+ +++ K F + +G + + A ++G+I+ G +++G LG++ ++P
Sbjct: 347 YLRVSVLQKGKGKLVLFEDIMAGGYWTAARANDGRIFVCGLNNFGHLGIEPPDVDQNAKP 406
Query: 332 --------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ PT P+ + + CG A+D G ++G G LG G
Sbjct: 407 GEGGPELRIMRPTESPAYAGRKFVQL-CGVQHMIALDENGDVFGIGKNTDNALGLGTWTG 465
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+++ Y E +P+ + C S A + EGV
Sbjct: 466 NDDTDHWRYTH-----------------LEKIELPTKAAGIAAKLGC----SLAWNKEGV 504
Query: 444 LYGWGMGNGYQLGNGKEDD-----ILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ WG QLG G +DD + +P +I L Y ++ + H++ LA
Sbjct: 505 AFSWGCDTSGQLGLGIKDDDDEKVVPKPRQITSAHLEGYHIVGASIADNHALFLA 559
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDQGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLTARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 174/342 (50%), Gaps = 33/342 (9%)
Query: 48 GQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+LGLG +E + + ++D NV ++ G +TV +T++GKVY+ G ND G LG
Sbjct: 10 GELGLGG--IEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLG 67
Query: 103 RE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EG 160
E A + IP + +I+ G+ H++A+ E G +++WG + +G +GL +
Sbjct: 68 HEKARKRLQLIPGLDAFVFR--KIACGNCHTLAVNEWGQLFSWGC--NMNGQLGLNSVDC 123
Query: 161 IQKTP--LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
++ P +K+ + IV+IA G +H + LT+ G L G +GQLG + + +R
Sbjct: 124 TERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKR 183
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNT 277
+ VP I + G Y+T + SK G++ ++G N + QLG D VQ+
Sbjct: 184 ISTL---AAVP-----IAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLND--VQQRNLP 233
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
C +++L + K G+ S+ L +G ++ G YG+LG N + + P
Sbjct: 234 C-----QLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEIL-PRQ 287
Query: 338 IPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGN 378
+ L T+T I+CG + A + S G +Y WG+G QLGN
Sbjct: 288 VMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGN 329
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 158/343 (46%), Gaps = 52/343 (15%)
Query: 16 PSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL 68
P + F+ + V + C T G V +CG D GQLG RK L+ L
Sbjct: 25 PREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLG---HEKARKRLQLIPGL 81
Query: 69 DNVV--EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
D V ++ G HT+ + E G++++WGCN G LG + +E +P+ + + VQ
Sbjct: 82 DAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQ 141
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSG--IVKIASGA 181
I+ G HS+AL DG +YAWGS R+ G +GL + P ++ +++ I IA G
Sbjct: 142 IACGTEHSIALTNDGELYAWGSNRE--GQLGLGSYTTTEIKPKRISTLAAVPIAFIACGG 199
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSAS------RNARRGMSFLEPGEVPLKRK 233
H ++++ G + + G GQLG + QR+ RNA+ + + GE
Sbjct: 200 YHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAK--VCYATCGE------ 251
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
++ F++ G + G Y QLG ++ + P + L
Sbjct: 252 --------EFSVFLTMDGGVFTCGAGMYGQLGHGNTTNE-------ILPRQVMELMGSTV 296
Query: 294 TMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
T ++ G+ H+LAL S G++YA+G G+LG S+ T P
Sbjct: 297 TQISCGKRHTLALVPSRGRVYAWGLGGAGQLG-NRASQSATTP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 52/349 (14%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLE----SVSGIVKIASGADHFVMLTSRGNLLTA 196
++ WGS HG +GL G + + E S + +IA G ++ V +T G + +
Sbjct: 1 MFCWGS--TIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG AR+ + + + + RK + G +T ++ G + +
Sbjct: 59 GNNDYGQLGH-------EKARKRLQLIPGLDAFVFRK----IACGNCHTLAVNEWGQLFS 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG + + P +IK L +A G HS+AL ++G++YA+
Sbjct: 108 WGCNMNGQLGLNSVDCTER------VPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G + G+LGL + + +P I +L I IACG + I G ++ WG Q
Sbjct: 162 GSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQ 221
Query: 376 LG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSE 409
LG G+E + L +G ++ G YG+LG N +
Sbjct: 222 LGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTN 281
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGN 457
+ P + L T+T I+CG + A + S G +Y WG+G QLGN
Sbjct: 282 EIL-PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGN 329
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 32/241 (13%)
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
F P + + +A G+++++A+ EGK+Y+ G +DYG+LG + + + IP
Sbjct: 23 FMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQ---LIP 79
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG---------------------- 377
L IACGNC + A++ G L+ WG QLG
Sbjct: 80 GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVI 139
Query: 378 ----NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
G E I L ++G++YA+G + G+LGL + + +P I +L I IACG
Sbjct: 140 VQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGG 199
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ I G ++ WG QLG P ++ + L N V G + SV L
Sbjct: 200 YHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQL--RTLRNAKVCYATCGEEFSVFL 257
Query: 493 A 493
Sbjct: 258 T 258
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 312 IYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G +G LGL + E + P + ++ + IACG + AI EG +Y G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 371 GNGYQLGNGKEDDIL------------------------NSEGKIYAFGRHDYGRLGLKN 406
+ QLG+ K L N G+++++G + G+LGL +
Sbjct: 61 NDYGQLGHEKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-LE 465
V P I L I IACG S A+ ++G LY WG QLG G ++
Sbjct: 121 VDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIK 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P +I L + +A GG H+++++K
Sbjct: 181 PKRI--STLAAVPIAFIACGGYHTIVISK 207
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLT-EDGK 89
T G V TCG G GQLG G +++ R+ L+ V ++ G HT+ L G+
Sbjct: 258 TMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMG--STVTQISCGKRHTLALVPSRGR 315
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV 116
VY WG G LG A S PQ V
Sbjct: 316 VYAWGLGGAGQLGNRA-SQSATTPQVV 341
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 5 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 63
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 64 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 118
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 119 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 178
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 179 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 230
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 231 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 283
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 284 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 334
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 172/402 (42%), Gaps = 61/402 (15%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
T+ WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 4 TMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 63
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+GQLG +R ++ + G L +HI V G ++ +S +G + ++
Sbjct: 64 LNTKGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSW 112
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G
Sbjct: 113 GAGSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 166
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ +G+LGL P + SL+ + +A G SFA+ G ++GWGM N QL
Sbjct: 167 KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 226
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D +L G ++ FG G+LG ++++
Sbjct: 227 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 286
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G++Y +G G QLG G ++ P +
Sbjct: 287 VN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 345
Query: 470 EG-------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+G + + V Q+ SGG + +L N
Sbjct: 346 KGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 387
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 34 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 90
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 91 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 150
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 151 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 208
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 209 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 258
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 259 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 309
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 310 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 345
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 196/420 (46%), Gaps = 66/420 (15%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQ-ISAGDSHSVALLEDGTVYAWG 145
G V ++G D G + + P+ V L ++ V+ +SAG HS+ +DG + ++G
Sbjct: 78 GNVVSFGLADPSGHGDHVD---KLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFG 134
Query: 146 SFRDSHGSMGLKGEGIQKT---PLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
+ G G G Q+T P + S+SG IVK+A+GA H ++L+ +GN+ + G
Sbjct: 135 YGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGI 194
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGL 258
G LG Q AR+ L P + L+R+ + D+ G ++ ++ G + +FGL
Sbjct: 195 DGSLGHGDQ------ARQ----LVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGL 244
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN------SEGKI 312
+ LG D+++ P I+ + +A+G HSL L+ EG++
Sbjct: 245 GSEGALGHGDTDMS-------LVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRV 297
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+FG++ YG+LGL + S + P + + I G S
Sbjct: 298 LSFGQNSYGQLGLGHFSRMIASPAQVQV--EAAAVEIEAGAHHSL--------------- 340
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
+L ++G++Y+FG +G+LG N EPT I SL+ + I +A GN
Sbjct: 341 -----------VLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGN 389
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S + +EG ++ +G G +LG G E + +P + +TV +++G HS+++
Sbjct: 390 NFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAA---GHTVSAISAGYSHSLVV 446
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 159/337 (47%), Gaps = 48/337 (14%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGAL--GREAEGD--SEFIPQTV-NLPK-KA 122
+ V +V G H++ T+DG + ++G + GR GD ++ IP+ V +L +
Sbjct: 109 ERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRI 168
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASG 180
V+++AG HS+ L + G V+++G D GS+G + Q P + S+ +V IA+G
Sbjct: 169 VKVAAGAHHSLVLSDQGNVFSFGVGID--GSLGHGDQARQLVPKLISSLQREKVVDIAAG 226
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGR--------------ITQRSASRNARRGMSFLEPG 226
+ H +++ G++ + G +G LG QR A + A G L
Sbjct: 227 SAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSL--- 283
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
V + +Y + +G +L+FG N+Y QLG G+ +
Sbjct: 284 -----------VLSKLY--VLEQEGRVLSFGQNSYGQLG--------LGHFSRMIASPAQ 322
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+ + +G HHSL L ++G++Y+FG +G+LG N EPT I SL+ + I
Sbjct: 323 VQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERI 382
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+A GN S + +EG ++ +G G +LG G E +
Sbjct: 383 VDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESN 419
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 230 LKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYS-----QLGEADSEVQKSGNTCFFTPH 283
L R+ + DV G+Y++ +++K G +L+FG + + +LG D Q P
Sbjct: 106 LARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQ-------MIPR 158
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+ SLS + +A+G HHSL L+ +G +++FG G LG + + + P I SLQ
Sbjct: 159 PVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV-PKLISSLQR 217
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
+ + IA G+ S + G +Y +G+G+ LG+G D
Sbjct: 218 EKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAA 277
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+L EG++ +FG++ YG+LGL + S + P + + I G
Sbjct: 278 GGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQV--EAAAVEIEAG 335
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
S + ++G +Y +G+ QLG+G + D EP I+ L ++ VA+G S+
Sbjct: 336 AHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQ--SLERERIVDVAAGNNFSL 393
Query: 491 ILA 493
+L+
Sbjct: 394 VLS 396
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 34/283 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G G G LG G D + L+ L + VV++ G H++ + E G VY++G
Sbjct: 185 GNVFSFGVGIDGSLGHG-DQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFG 243
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALL------EDGTVYAWGS 146
EGALG + D +P+ + + + AV+++AG SHS+ L ++G V ++G
Sbjct: 244 LGSEGALG-HGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFG- 301
Query: 147 FRDSHGSMGL-KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
++S+G +GL + +P +++ + V+I +GA H ++LT+ G + + G + GQLG
Sbjct: 302 -QNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLG 360
Query: 206 RITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
N R EP + L+R+ I DV G ++ +S++G++ +FG +
Sbjct: 361 H-------GNDLRDNP--EPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGR 411
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
LG+ D F H + ++S +G HSL +
Sbjct: 412 LGKGDESNATQPTVVFAAGHTVSAIS--------AGYSHSLVV 446
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 44/249 (17%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++++FGL + S G+ V K P +++L+ ++ +++G +HSL +G
Sbjct: 78 GNVVSFGLADPSGHGD---HVDK------LRPKCVEALARERVRDVSAGLYHSLVATKDG 128
Query: 311 KIYAFGRHDY-----GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ +FG GRLG + + P P+ SL I +A G S + +G +
Sbjct: 129 GLLSFGYGSANVVVDGRLGHGDQRTQMI-PRPVLSLSGVRIVKVAAGAHHSLVLSDQGNV 187
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ +G+G LG+G + L P I SLQ + +
Sbjct: 188 FSFGVGIDGSLGHGDQARQL---------------------------VPKLISSLQREKV 220
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
IA G+ S + G +Y +G+G+ LG+G D L P KIE ++VA+G
Sbjct: 221 VDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIE--HFVQRPAVKVAAG 278
Query: 486 GQHSVILAK 494
G HS++L+K
Sbjct: 279 GSHSLVLSK 287
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V + G GQLG G D+ + L++ L+ +V+V G ++ L+ +G V+
Sbjct: 343 TNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVF 402
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALL 136
++GC G LG+ E ++ P V V ISAG SHS+ ++
Sbjct: 403 SFGCGKNGRLGKGDESNAT-QPTVVFAAGHTVSAISAGYSHSLVVV 447
>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
Length = 392
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 174/363 (47%), Gaps = 43/363 (11%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALV--EDLDNVVEVVVGGMHTVCLTE 86
T K G V+ G G GLG ++ KT + V +DL +V+ V G HTV L +
Sbjct: 43 TFMVKKDGSVIYGTGSDANG--GLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQK 100
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
DG V+TWG + G LG E +E P V Q+ AG++ ++AL EDGTV+A+G
Sbjct: 101 DGTVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSDVKQVRAGENFTLALKEDGTVWAFGK 160
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
R G G+G +T +K VSG IV I +G + + L+ G + G GQ
Sbjct: 161 NRS-----GQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQ 215
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG T+ A L+P +V + + + TG + ++S G + +G N
Sbjct: 216 LGNGTREKA----------LQPVQVS-ELTDVIAISTGEKQGYAVTSNGDVYGWGYNQ-G 263
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG+ +KS N +P LI + D + SG+ H+LAL +G ++A+G + +G+
Sbjct: 264 KLGDG---TKKSSN----SPVLIDGIYD--VIAVDSGKQHTLALKEDGTVWAWGTNTHGQ 314
Query: 323 LGLKNVSEPVTEP-TPIPSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
LG PV TP + T I +I G S AI +G ++ WG + +L
Sbjct: 315 LGY---GTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGEL 371
Query: 377 GNG 379
G G
Sbjct: 372 GLG 374
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 57/377 (15%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSGIVKIASGADH 183
+SA ++ + + +DG+V +G+ D++G +G +G +P+ ++ +S ++ + +G H
Sbjct: 36 LSADNNRTFMVKKDGSVI-YGTGSDANGGLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSH 94
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
V L G + T G G+LG +S + + +L +K+ + FT
Sbjct: 95 TVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHH-VKWLSD----VKQVRAGENFT--- 146
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ G++ AFG N QLG+ +E + P + L+D + +G+ S
Sbjct: 147 -LALKEDGTVWAFGKNRSGQLGDGTTETR-------VKPVQVSGLTD--IVAIDAGEEFS 196
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL+ +G ++A+G + G+LG E +P + L D + +I+ G +A+ S G
Sbjct: 197 LALSEDGTVWAWGNNSVGQLG-NGTREKALQPVQVSELTD--VIAISTGEKQGYAVTSNG 253
Query: 364 VLYGWGMGNGYQLGNGKE---------DDI---------------LNSEGKIYAFGRHDY 399
+YGWG G +LG+G + D I L +G ++A+G + +
Sbjct: 254 DVYGWGYNQG-KLGDGTKKSSNSPVLIDGIYDVIAVDSGKQHTLALKEDGTVWAWGTNTH 312
Query: 400 GRLGLKNVSEPVTEP-TPIPSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
G+LG PV TP + T I +I G S AI +G ++ WG +
Sbjct: 313 GQLGY---GTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNG 369
Query: 454 QLGNGKEDDILEPMKIE 470
+LG G + P KIE
Sbjct: 370 ELGLGHSKKQMYPAKIE 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 64 LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP---- 119
L++ + +V+ V G HT+ L EDG V+ WG N G LG + P V L
Sbjct: 278 LIDGIYDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEP 337
Query: 120 -KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
+ V I AG HS A+ +DGTV++WG +S+G +GL Q P K+E+++
Sbjct: 338 LNQIVAIDAGGFHSHAIKKDGTVWSWG--FNSNGELGLGHSKKQMYPAKIETIN 389
>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 323
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 157/331 (47%), Gaps = 54/331 (16%)
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN 117
+ TFA NV+ GG H++ L DG V+ WG N G LG + + P V
Sbjct: 23 QETTFAA----GNVISSAAGGSHSLILRSDGTVWAWGNNGNGQLG-DGTFEQRNEPVLVK 77
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG---LKGEGIQKTPLKLESVSGI 174
+I+AG SHS+AL DGTV+ WG + G +G I K P++ ++ +
Sbjct: 78 GLTGVTKIAAGSSHSLALKSDGTVWGWG--WNGKGQLGNNTTTSSNISK-PVQAVGLTDV 134
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+ IA+G H + L G + G S S N +P + +
Sbjct: 135 IDIAAGDAHGLALKKDGTVWIWG-------------SNSTN------------LPTRVES 169
Query: 235 IDDV----FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ DV G +N + G++ ++G N Y QLG + +G+ P + +LS+
Sbjct: 170 LTDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLG-----INNTGSKDV--PTKVSNLSN 222
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+A+G HHSLAL+ EGK+YA+G + YG++G ++ P +PSL D I IA
Sbjct: 223 --IVSVAAGFHHSLALDVEGKVYAWGGNTYGQVGDGTTTQR-NAPVEVPSLVD--IVEIA 277
Query: 351 CGNCV--SFAIDSEGVLYGWGMGNGYQLGNG 379
G+ + A+ +G +Y WG+G QLGNG
Sbjct: 278 SGSYSYHTLALKKDGTVYAWGLGTSGQLGNG 308
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 42/294 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG G +R LV+ L V ++ G H++ L DG V+ WG N
Sbjct: 49 GTVWAWGNNGNGQLGDGT-FEQRNEPVLVKGLTGVTKIAAGSSHSLALKSDGTVWGWGWN 107
Query: 97 DEGALGREAEGDSEFIP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG S Q V L + I+AGD+H +AL +DGTV+ WGS
Sbjct: 108 GKGQLGNNTTTSSNISKPVQAVGL-TDVIDIAAGDAHGLALKKDGTVWIWGSNS------ 160
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
P ++ES++ + IA+ H + + G + + G GQLG + S+
Sbjct: 161 -------TNLPTRVESLTDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLG--INNTGSK 211
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTF-ISSKGSILAFGLNNYSQLGEADSE 270
+VP K ++ ++ + G +++ + +G + A+G N Y Q+G+ +
Sbjct: 212 ------------DVPTKVSNLSNIVSVAAGFHHSLALDVEGKVYAWGGNTYGQVGDGTTT 259
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+ + P + SL D S +H+LAL +G +YA+G G+LG
Sbjct: 260 QRNA-------PVEVPSLVDIVEIASGSYSYHTLALKKDGTVYAWGLGTSGQLG 306
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 129/297 (43%), Gaps = 82/297 (27%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ + S G++ A+G N QLG+ E + P L+K L+ T +A+G
Sbjct: 39 GSHSLILRSDGTVWAWGNNGNGQLGDGTFEQRNE-------PVLVKGLTG--VTKIAAGS 89
Query: 301 HHSLALNSEGKIYAFGRHDYGRLG-----LKNVSEPVTE--------------------- 334
HSLAL S+G ++ +G + G+LG N+S+PV
Sbjct: 90 SHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVGLTDVIDIAAGDAHGLALKK 149
Query: 335 --------------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLG-- 377
PT + SL D + +IA + + +G ++ WG NGY QLG
Sbjct: 150 DGTVWIWGSNSTNLPTRVESLTD--VRAIAAAGAHNLTVKKDGTVWSWGW-NGYGQLGIN 206
Query: 378 NGKEDDI----------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
N D+ L+ EGK+YA+G + YG++G ++ P
Sbjct: 207 NTGSKDVPTKVSNLSNIVSVAAGFHHSLALDVEGKVYAWGGNTYGQVGDGTTTQR-NAPV 265
Query: 416 PIPSLQDKTITSIACGNCV--SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+PSL D I IA G+ + A+ +G +Y WG+G QLGNG + P+++
Sbjct: 266 EVPSLVD--IVEIASGSYSYHTLALKKDGTVYAWGLGTSGQLGNGTTTNSNIPIQVN 320
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
T+ A GN +S A G IL S+G ++A+G + G+LG
Sbjct: 25 TTFAAGNVISSA------------------AGGSHSLILRSDGTVWAWGNNGNGQLG-DG 65
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--KEDDIL 464
E EP + L +T IA G+ S A+ S+G ++GWG QLGN +I
Sbjct: 66 TFEQRNEPVLVKGLTG--VTKIAAGSSHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNIS 123
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+P++ G V+ +A+G H + L K
Sbjct: 124 KPVQAVGLT----DVIDIAAGDAHGLALKK 149
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM--HTVCLTEDGKVYTWG 94
G V G GQ+G G +R V L ++VE+ G HT+ L +DG VY WG
Sbjct: 240 GKVYAWGGNTYGQVGDGT-TTQRNAPVEVPSLVDIVEIASGSYSYHTLALKKDGTVYAWG 298
Query: 95 CNDEGALGREAEGDSEFIPQTVNL 118
G LG +S IP VN+
Sbjct: 299 LGTSGQLGNGTTTNSN-IPIQVNI 321
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVM----ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+G ++ E + + + D NV EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHD-RNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG + EG P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHDCEGSK---PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSD--G 114
Query: 153 SMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G N+ QLG +D
Sbjct: 175 CPSQASPQRVKSL---DGIPLAQ-----VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 ERDRES-------PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L ++ IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 37/254 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ F+ G + GLN QLG D E K P I +L+ + +A G+
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGH-DCEGSK--------PEQIGALAGQHIVHVACGE 93
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HSLAL+ +G+++++G G+LGL + + VT P I L +TI ++CGN A+
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA 153
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
++G + W G++ YG+LGL P + SL
Sbjct: 154 ADGQFFTW--------------------------GQNSYGQLGLGKECPSQASPQRVKSL 187
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+ +A G SFA+ G ++GWG + QLG E D P + K L + V+
Sbjct: 188 DGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV--KLLRSQKVV 245
Query: 481 QVASGGQHSVILAK 494
++ G +H+ +L K
Sbjct: 246 YISCGEEHTAVLTK 259
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 61/367 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKR 232
+ ++A G +H V L G + T G +GQLG + S +P ++ L
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS------------KPEQIGALAG 83
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+HI V G ++ +S +G + ++G + QLG E + P LIK L+ +
Sbjct: 84 QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVT------VPRLIKKLNQQ 137
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++ G H LAL ++G+ + +G++ YG+LGL P + SL + +A
Sbjct: 138 TILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAA 197
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G SFA+ G ++GWG + QLG E D +L
Sbjct: 198 GGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVL 444
G ++ FG G+LG ++++ V P + L ++ IACG + A + S G++
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGK------QLN-------NYTVLQVASGGQHSVI 491
Y +G G QLG G ++ P ++G QL+ + V + SGG + +
Sbjct: 317 YAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFV 376
Query: 492 LAKPKPN 498
L N
Sbjct: 377 LFSKYEN 383
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 150/312 (48%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + ++V V G H++ L++ G++++WG
Sbjct: 53 GEVYTCGLNTKGQLGHDCEGSKPEQIGALAG-QHIVHVACGESHSLALSDQGQLFSWGAG 111
Query: 97 DEGALGREAEGDSEFIPQTV-NLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG D+ +P+ + L ++ + Q+S G+ H +AL DG + WG ++S+G +
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWG--QNSYGQL 169
Query: 155 GLKGEG-IQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P +++S+ GI ++A+G H L+ G + G GQLG +R
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 230 RE----------SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+ EV P + L + + +A G+HH+LA S G IYAFG G+LG
Sbjct: 280 NDEV---------NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 327 NVSEPVTEPTPI 338
+ V P+P+
Sbjct: 331 HTCN-VKCPSPV 341
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 312 IYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+ G+ N+ V EP + D+ + +ACG S + +G +Y G+
Sbjct: 1 MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 371 GNGYQLGN----GKEDDI--------------------LNSEGKIYAFGRHDYGRLGLKN 406
QLG+ K + I L+ +G+++++G G+LGL
Sbjct: 61 NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTT 120
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILE 465
+ + VT P I L +TI ++CGN A+ ++G + WG + QLG GKE
Sbjct: 121 IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ K L+ + QVA+GG HS L+
Sbjct: 181 PQRV--KSLDGIPLAQVAAGGAHSFALS 206
>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
Length = 985
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 151/314 (48%), Gaps = 30/314 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAG 128
V V G HT+ LT+D K+++ G N +G LGR +EG P ++ VQI+AG
Sbjct: 12 VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAG 71
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVML 187
+HS+A+ +DG V+AWGS + HG +G++ Q+ P ++ ++ +V++ASG+DH + L
Sbjct: 72 RAHSLAVADDGRVFAWGS--NEHGQLGMENTITWQEMPKRINQLNEVVQVASGSDHCIAL 129
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF- 246
T G + G G+ + NA +P+ R V G +
Sbjct: 130 TEDGRVYVWGEQADGRCIHHPELVEHLNA-----------IPIVR-----VEAGARHCVA 173
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
IS+ G++ +G NN +LG D Q S H + + A G +H++ L
Sbjct: 174 ISASGAVFTWGQNNSGELGMDDFRPQTS-------VHHVTQMDGLGVVEAACGDNHTILL 226
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
G+ ++FG G+ G E PT + L +T IA G C + AI G Y
Sbjct: 227 THCGRTFSFGSDALGQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAI-IRGSPY 285
Query: 367 GWGMGNGYQLGNGK 380
+G+ + QLGNGK
Sbjct: 286 PFGLNSSGQLGNGK 299
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 31/296 (10%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
+V++ G H++ + +DG+V+ WG N+ G LG E + +P+ +N + VQ+++G
Sbjct: 65 IVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEVVQVASGSD 124
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
H +AL EDG VY WG D G I P +E ++ IV++ +GA H V ++
Sbjct: 125 HCIALTEDGRVYVWGEQAD--------GRCIHH-PELVEHLNAIPIVRVEAGARHCVAIS 175
Query: 189 SRGNLLTAGCPEQGQLGRITQR-SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + T G G+LG R S + M L E H +
Sbjct: 176 ASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGDNH---------TILL 226
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G +FG + Q G +++K N P + L T +A+G H++A+
Sbjct: 227 THCGRTFSFGSDALGQCGFG-KKLEKRPN-----PTAVSDLIGSHVTRIAAGACHTIAI- 279
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
G Y FG + G+LG + +T+ TP + +T++ G +F I S G
Sbjct: 280 IRGSPYPFGLNSSGQLGNGKI---MTQSTPRKTDDLDHVTAVFAGYHQTFFIRSAG 332
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G + GQLG+ + ++ + L+ VV+V G H + LTEDG+VY WG
Sbjct: 82 GRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEVVQVASGSDHCIALTEDGRVYVWG-- 139
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
E A GR E + +P V++ AG H VA+ G V+ WG +++ G +G+
Sbjct: 140 -EQADGR-CIHHPELVEHLNAIP--IVRVEAGARHCVAISASGAVFTWG--QNNSGELGM 193
Query: 157 KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
Q + + + G+V+ A G +H ++LT G + G GQ G ++ R
Sbjct: 194 DDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSDALGQCG-FGKKLEKR 252
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
+S L H+ + G +T +GS FGLN+ QLG Q
Sbjct: 253 PNPTAVS-------DLIGSHVTRIAAGACHTIAIIRGSPYPFGLNSSGQLGNGKIMTQS- 304
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
TP L T + +G H + + S G I
Sbjct: 305 ------TPRKTDDLD--HVTAVFAGYHQTFFIRSAGSI 334
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 58/318 (18%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG----E 227
+ + +A G H + LT + + G GQLGR +RS + +S L G +
Sbjct: 10 TAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGR-GKRSEGSFSIYPVS-LTSGVGIVQ 67
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
+ R H + ++ G + A+G N + QLG ++ + P I
Sbjct: 68 IAAGRAH---------SLAVADDGRVFAWGSNEHGQLGMENTITWQE------MPKRINQ 112
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
L++ +ASG H +AL +G++Y +G GR + P + L I
Sbjct: 113 LNE--VVQVASGSDHCIALTEDGRVYVWGEQADGRC--------IHHPELVEHLNAIPIV 162
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------------------GKED 382
+ G AI + G ++ WG N +LG G
Sbjct: 163 RVEAGARHCVAISASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGDNH 222
Query: 383 DILNSE-GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
IL + G+ ++FG G+ G E PT + L +T IA G C + AI
Sbjct: 223 TILLTHCGRTFSFGSDALGQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAI-IR 281
Query: 442 GVLYGWGMGNGYQLGNGK 459
G Y +G+ + QLGNGK
Sbjct: 282 GSPYPFGLNSSGQLGNGK 299
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A+G+ HSLA+ +G+++A+G +++G+LG++N P I L + + +A G+
Sbjct: 68 IAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNE--VVQVASGSDH 125
Query: 356 SFAIDSEGVLYGWG-MGNGYQLGNGKEDDILN------------------SEGKIYAFGR 396
A+ +G +Y WG +G + + + + LN + G ++ +G+
Sbjct: 126 CIALTEDGRVYVWGEQADGRCIHHPELVEHLNAIPIVRVEAGARHCVAISASGAVFTWGQ 185
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
++ G LG+ + P T + + + ACG+ + + G + +G Q G
Sbjct: 186 NNSGELGMDDF-RPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSDALGQCG 244
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
GK+ + P L V ++A+G H++ + + P
Sbjct: 245 FGKKLE-KRPNPTAVSDLIGSHVTRIAAGACHTIAIIRGSP 284
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 37/223 (16%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G+ H++ L + K+++ G + G+LG SE P+ I IA G
Sbjct: 15 VACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAGRAH 74
Query: 356 SFAIDSEGVLYGWGMGNGYQLG------------------------NGKEDDI-LNSEGK 390
S A+ +G ++ WG QLG +G + I L +G+
Sbjct: 75 SLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEVVQVASGSDHCIALTEDGR 134
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+Y +G GR + P + L I + G AI + G ++ WG
Sbjct: 135 VYVWGEQADGRC--------IHHPELVEHLNAIPIVRVEAGARHCVAISASGAVFTWGQN 186
Query: 451 NGYQLGNGKEDDILEPMKIEG-KQLNNYTVLQVASGGQHSVIL 492
N +LG DD + Q++ V++ A G H+++L
Sbjct: 187 NSGELGM---DDFRPQTSVHHVTQMDGLGVVEAACGDNHTILL 226
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 26 AVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEV 74
A+P ++ + G G V T GQ ++G+LG+ D + + V +D VVE
Sbjct: 158 AIPIVRVEAGARHCVAISASGAVFTWGQNNSGELGMD-DFRPQTSVHHVTQMDGLGVVEA 216
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHS 132
G HT+ LT G+ +++G + G G + + P V+ + +I+AG H+
Sbjct: 217 ACGDNHTILLTHCGRTFSFGSDALGQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHT 276
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
+A++ G+ Y +G +S G +G Q TP K + + + + +G + S G+
Sbjct: 277 IAIIR-GSPYPFG--LNSSGQLGNGKIMTQSTPRKTDDLDHVTAVFAGYHQTFFIRSAGS 333
Query: 193 L 193
+
Sbjct: 334 I 334
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 58/370 (15%)
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFV 185
+ G+SH++AL +GTV+AWG G +G P++++ + + IA+G H +
Sbjct: 45 AGGESHTLALNANGTVWAWGG-----GQLGNGSTTGSPAPVQVQDLHSVEAIAAGGSHNL 99
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
+ S G + G GQLG + RN P +V R + ++
Sbjct: 100 AIKSDGTVWAWGFNGYGQLGD--GSTTGRNT--------PVQVEGLRSIVGAAAHYDHSL 149
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ S G++ A+G N Y QLG+ T TP +K L ++SG +SLA
Sbjct: 150 ALKSDGTVWAWGRNEYGQLGDG-------SKTDRHTPVRVKGL--DSVVAISSGFGYSLA 200
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ S+G ++A+G+++YG+LG + ++ + P + L ++T++A G+ + AI +G +
Sbjct: 201 VKSDGTVWAWGKNEYGQLGNGSTTQS-SAPVQVQGLH--SVTAVASGDYHNLAIKRDGTV 257
Query: 366 YGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGR 401
+ WG QLG+G + D L S+G ++A+G + +
Sbjct: 258 WSWGPNLAGQLGDGSDMDRYTPVQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
G + TP+ + ++ IA G S A+ ++G ++ WG + QLG+G
Sbjct: 318 WGFGS-------STPVQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTST 370
Query: 462 DILEPMKIEG 471
L P+K++G
Sbjct: 371 ARLTPIKVQG 380
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 37/319 (11%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
V+DL +V + GG H + + DG V+ WG N G LG + P V + V
Sbjct: 82 VQDLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLG-DGSTTGRNTPVQVEGLRSIVG 140
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
+A HS+AL DGTV+AWG R+ +G +G + + TP++++ + +V I+SG +
Sbjct: 141 AAAHYDHSLALKSDGTVWAWG--RNEYGQLGDGSKTDRHTPVRVKGLDSVVAISSGFGYS 198
Query: 185 VMLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG 241
+ + S G + G E GQLG TQ SA V ++ H + V +G
Sbjct: 199 LAVKSDGTVWAWGKNEYGQLGNGSTTQSSA--------------PVQVQGLHSVTAVASG 244
Query: 242 VY-NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y N I G++ ++G N QLG+ S++ + +TP ++ S + +G
Sbjct: 245 DYHNLAIKRDGTVWSWGPNLAGQLGDG-SDMDR------YTPVQVEGFSSA--VDVDAGF 295
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HSLAL S+G ++A+G + + G + TP+ + ++ IA G S A+
Sbjct: 296 GHSLALKSDGTVWAWGNYQFNEWGFGS-------STPVQVQELDSVVDIAAGTQHSLAVR 348
Query: 361 SEGVLYGWGMGNGYQLGNG 379
++G ++ WG + QLG+G
Sbjct: 349 NDGTVWAWGKNDNGQLGDG 367
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 39/225 (17%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
M A G+ H+LALN+ G ++A+G G+LG + + P P+ ++ +IA G
Sbjct: 43 MAAGGESHTLALNANGTVWAWGG---GQLGNGSTT---GSPAPVQVQDLHSVEAIAAGGS 96
Query: 355 VSFAIDSEGVLYGWGMGNGY-QLGNGK------------------------EDDILNSEG 389
+ AI S+G ++ WG NGY QLG+G L S+G
Sbjct: 97 HNLAIKSDGTVWAWGF-NGYGQLGDGSTTGRNTPVQVEGLRSIVGAAAHYDHSLALKSDG 155
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
++A+GR++YG+LG + ++ TP+ ++ +I+ G S A+ S+G ++ WG
Sbjct: 156 TVWAWGRNEYGQLGDGSKTD---RHTPVRVKGLDSVVAISSGFGYSLAVKSDGTVWAWGK 212
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
QLGNG P++++G ++V VASG H++ + +
Sbjct: 213 NEYGQLGNGSTTQSSAPVQVQGL----HSVTAVASGDYHNLAIKR 253
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G + G G T V++LD+VV++ G H++ + DG V+ WG N
Sbjct: 305 GTVWAWGNYQFNEWGFG-----SSTPVQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKN 359
Query: 97 DEGALG 102
D G LG
Sbjct: 360 DNGQLG 365
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 20 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 78
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 79 -YGAGGRLGIGGTESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 136
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 137 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 188
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 189 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 241
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 242 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 292
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 293 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 333
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 334 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 388
Query: 497 P 497
P
Sbjct: 389 P 389
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 18 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 76
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 77 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 136
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 137 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 191
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 192 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 244
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 245 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 297
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 298 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 352
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 353 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 33/253 (13%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+G N + G+I +G N+ QLG + K P ++L+ + L G
Sbjct: 9 SGRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVK-------VPTPCEALATLRPVQLIGG 61
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+ A+ ++GK+YA G + G +E V+ PT + S+Q I +A +
Sbjct: 62 EQTLFAVTADGKLYATG-YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS------ 114
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
GK L+SEG++Y++G + G+LG N S P P I S
Sbjct: 115 ------------------GGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIES 155
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
L+ + +A G S + + G LY WG G +LG+ +D L+P +E Q +
Sbjct: 156 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 215
Query: 480 LQVASGGQHSVIL 492
+ SG ++ L
Sbjct: 216 IACGSGDAQTLCL 228
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 281 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 339
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 340 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+G+E+ G IY +G + G+LG ++ V PTP +L + G FA
Sbjct: 9 SGRENLYFQGSGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFA 67
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ ++G LY G G G +LG G + + P +E Q + V SGG+H + L+
Sbjct: 68 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS 123
>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 447
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 150/321 (46%), Gaps = 26/321 (8%)
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS 126
D+ V ++ G H + L DG V+ WG N G LG + ++ P V IS
Sbjct: 68 DISGVRQIAAGSGHVLALKGDGTVWAWGSNSYGELG-DGTNENSIEPVQVAGLTGVKAIS 126
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK--TPLKLESVSGIVKIASGADHF 184
AG S+AL DG+V+AWGS +++G +G TP+++E + G+V I+ G H
Sbjct: 127 AGKGFSLALKGDGSVWAWGS--NTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGGSHC 184
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
L G L G G LG T S +P + +K D +
Sbjct: 185 FALQENGVLWAWGENSHGILGDGTNESQ----------FKPVKPKIKDVKAFDAGELSHA 234
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF------FTPHLIKSLSDKKFTMLAS 298
+ GS+ A+G N QLG + G + P +++ +SD K +A+
Sbjct: 235 LAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRGVSDAK--AVAA 292
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNV-SEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G HS+AL S+G ++A+G + G+LGL + VT PT + ++ +T+IA G +
Sbjct: 293 GGSHSVALASDGSVWAWGSNSDGQLGLGHAGGSDVTSPTRVQGIEG--VTAIAAGMYHTL 350
Query: 358 AIDSEGVLYGWGMGNGYQLGN 378
A+ +G ++ WG + QLGN
Sbjct: 351 ALKGDGSVWAWGSNSDGQLGN 371
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
V + +V L EDG V+ WG R +G PQ V++ QI+AG
Sbjct: 30 AVAIAASNCTSVALLEDGSVWQWG--------RVCDGVEWSAPQRVDI-SGVRQIAAGSG 80
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
H +AL DGTV+AWGS +S+G +G P+++ ++G+ I++G + L
Sbjct: 81 HVLALKGDGTVWAWGS--NSYGELGDGTNENSIEPVQVAGLTGVKAISAGKGFSLALKGD 138
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
G++ G GQLG+ N M L P +V + G + +
Sbjct: 139 GSVWAWGSNTYGQLGK--------NPLSFMGSLTPIQVEGLEGVVSISCGGSHCFALQEN 190
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + A+G N++ LG+ +E Q F P K K F A H+LA+ +G
Sbjct: 191 GVLWAWGENSHGILGDGTNESQ-------FKPVKPKIKDVKAFD--AGELSHALAVKEDG 241
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++A+G + G+LG VS + D I G D++ V G
Sbjct: 242 SVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRG-----VSDAKAVAAG--- 293
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIA 429
G L S+G ++A+G + G+LGL + VT PT + ++ +T+IA
Sbjct: 294 --------GSHSVALASDGSVWAWGSNSDGQLGLGHAGGSDVTSPTRVQGIEG--VTAIA 343
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
G + A+ +G ++ WG + QLGN P+ I
Sbjct: 344 AGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPI 383
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 37/319 (11%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G G+LG G + + V L V + G ++ L DG V+ WG
Sbjct: 87 GDGTVWAWGSNSYGELGDGTNENSIEPVQ-VAGLTGVKAISAGKGFSLALKGDGSVWAWG 145
Query: 95 CNDEGALGREA-EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
N G LG+ P V + V IS G SH AL E+G ++AWG +SHG
Sbjct: 146 SNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGGSHCFALQENGVLWAWG--ENSHGI 203
Query: 154 MGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+G Q P+K + A H + + G++ G +GQLG
Sbjct: 204 LGDGTNESQFKPVKPKIKDVKAFDAGELSHALAVKEDGSVWAWGFNYKGQLG-------- 255
Query: 214 RNARRGMSFLEPGEVPLKRK---HIDDVFTGV-----------YNTFISSKGSILAFGLN 259
G+S + G + L R+ + D+ GV ++ ++S GS+ A+G N
Sbjct: 256 ---TGGVSLSDQGRISLGREADNYNPDIVRGVSDAKAVAAGGSHSVALASDGSVWAWGSN 312
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG + +G + +P ++ + + T +A+G +H+LAL +G ++A+G +
Sbjct: 313 SDGQLG-----LGHAGGSDVTSPTRVQGI--EGVTAIAAGMYHTLALKGDGSVWAWGSNS 365
Query: 320 YGRLGLKNVSEPVTEPTPI 338
G+LG + S + P PI
Sbjct: 366 DGQLGNASFSA-ASSPVPI 383
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 115/275 (41%), Gaps = 27/275 (9%)
Query: 35 GGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G G V G GQLG P M T VE L+ VV + GG H L E+G ++ W
Sbjct: 137 GDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGGSHCFALQENGVLWAW 196
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGD-SHSVALLEDGTVYAWG------- 145
G N G LG + +S+F P + K AG+ SH++A+ EDG+V+AWG
Sbjct: 197 GENSHGILG-DGTNESQFKPVKPKI-KDVKAFDAGELSHALAVKEDGSVWAWGFNYKGQL 254
Query: 146 -----SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
S D G + L E P + VS +A+G H V L S G++ G
Sbjct: 255 GTGGVSLSD-QGRISLGREADNYNPDIVRGVSDAKAVAAGGSHSVALASDGSVWAWGSNS 313
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
GQLG G P V + + + G+Y+T + GS+ A+G N
Sbjct: 314 DGQLG--------LGHAGGSDVTSPTRVQ-GIEGVTAIAAGMYHTLALKGDGSVWAWGSN 364
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
+ QLG A S P + + S T
Sbjct: 365 SDGQLGNASFSAASSPVPILIGPQIPTAASPTSIT 399
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 30/182 (16%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A+G H LAL +G ++A+G + YG LG +E EP + L + +I+ G
Sbjct: 75 IAAGSGHVLALKGDGTVWAWGSNSYGELG-DGTNENSIEPVQVAGLTG--VKAISAGKGF 131
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S A L +G ++A+G + YG+LG KN + T
Sbjct: 132 SLA--------------------------LKGDGSVWAWGSNTYGQLG-KNPLSFMGSLT 164
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
PI + + SI+CG FA+ GVL+ WG + LG+G + +P+K + K +
Sbjct: 165 PIQVEGLEGVVSISCGGSHCFALQENGVLWAWGENSHGILGDGTNESQFKPVKPKIKDVK 224
Query: 476 NY 477
+
Sbjct: 225 AF 226
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 50/253 (19%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++ A+G N+Y +LG+ +E P + L+ K +++G+ SLAL +G
Sbjct: 89 GTVWAWGSNSYGELGDGTNENS-------IEPVQVAGLTGVK--AISAGKGFSLALKGDG 139
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++A+G + YG+LG KN + TPI + + SI+CG FA
Sbjct: 140 SVWAWGSNTYGQLG-KNPLSFMGSLTPIQVEGLEGVVSISCGGSHCFA------------ 186
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L G ++A+G + +G LG +E +P P ++D + +
Sbjct: 187 --------------LQENGVLWAWGENSHGILG-DGTNESQFKPVK-PKIKD--VKAFDA 228
Query: 431 GNCV-SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT---------VL 480
G + A+ +G ++ WG QLG G + G++ +NY
Sbjct: 229 GELSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRGVSDAK 288
Query: 481 QVASGGQHSVILA 493
VA+GG HSV LA
Sbjct: 289 AVAAGGSHSVALA 301
>gi|392593511|gb|EIW82836.1| RCC1 BLIP-II [Coniophora puteana RWD-64-598 SS2]
Length = 422
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 164/360 (45%), Gaps = 55/360 (15%)
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE--------------GDSEF 111
+D ++ + GGMHT+ + E G V + G ND+ ALGR E G+ E
Sbjct: 29 QDNGSMEAIAAGGMHTLLIDERGTVRSCGVNDDAALGRATESVPNPAQEGSYLDEGELES 88
Query: 112 IPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI-QKTPL 166
P V + +AV+++AGD S A+ DG +Y WG+F+ S G++G + Q+ P
Sbjct: 89 YPHPVQTLQENNFRAVKVAAGDCISAAVSSDGELYIWGTFKASEGTLGFSEKARHQQVPQ 148
Query: 167 KLE----------SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+++ + V IA+G +H ++L++ G++ + G E G+LG + SR
Sbjct: 149 RIQLGPTTTRTQANPEKAVAIAAGNNHLLILSTHGSVYSCGAGESGELG---HKIPSRLK 205
Query: 217 RRGMSFLEPGEVPLKRK--HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
G + + L R+ V G +F + G + +GLN + Q G S K
Sbjct: 206 LHGTKVYK---IALGRRANRARCVGAGKSCSFAVDENGDVWGWGLNCFGQTGTGISS-PK 261
Query: 274 SGNTCFFTPHLIKSLSDKKF-----TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ + P + LS + +A G HH+L L S+GK+YA GR D G LGL +
Sbjct: 262 TLSDEIHIPTKVPKLSAEALNGDVVVQIAGGAHHTLFLTSQGKVYACGRCDGGELGLSDD 321
Query: 329 SEPVTE-----------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+E + IP + I I+ G S A+ +G LY WG +LG
Sbjct: 322 NEEFAQRRDPRFLDQPLQVSIPEQDEDPIVQISAGIENSMAVTRDGALYAWGQETNGELG 381
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 162/390 (41%), Gaps = 72/390 (18%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-----PLK 231
IA+G H +++ RG + + G + LGR T+ S A+ G S+L+ GE+ P++
Sbjct: 37 IAAGGMHTLLIDERGTVRSCGVNDDAALGRATE-SVPNPAQEG-SYLDEGELESYPHPVQ 94
Query: 232 RKHIDDVFTGV-------YNTFISSKGSILAFGLNNYSQ--LGEAD-SEVQKSGNTCFFT 281
++ F V + +SS G + +G S+ LG ++ + Q+
Sbjct: 95 TLQ-ENNFRAVKVAAGDCISAAVSSDGELYIWGTFKASEGTLGFSEKARHQQVPQRIQLG 153
Query: 282 PHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P ++ ++ +K +A+G +H L L++ G +Y+ G + G LG K S T +
Sbjct: 154 PTTTRTQANPEKAVAIAAGNNHLLILSTHGSVYSCGAGESGELGHKIPSRLKLHGTKVYK 213
Query: 341 L----QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------KEDDI------ 384
+ + + G SFA+D G ++GWG+ Q G G D+I
Sbjct: 214 IALGRRANRARCVGAGKSCSFAVDENGDVWGWGLNCFGQTGTGISSPKTLSDEIHIPTKV 273
Query: 385 -------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTE------ 413
L S+GK+YA GR D G LGL + +E +
Sbjct: 274 PKLSAEALNGDVVVQIAGGAHHTLFLTSQGKVYACGRCDGGELGLSDDNEEFAQRRDPRF 333
Query: 414 -----PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
IP + I I+ G S A+ +G LY WG +LG K + P
Sbjct: 334 LDQPLQVSIPEQDEDPIVQISAGIENSMAVTRDGALYAWGQETNGELGV-KGVNAKTPTV 392
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + ++ VA GG HS+ L + K +
Sbjct: 393 VVRRTGGSWQAKAVACGGHHSLGLFRRKAD 422
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
++ +IA G + ID G + G+ + LG E ++ Y D G L
Sbjct: 33 SMEAIAAGGMHTLLIDERGTVRSCGVNDDAALGRATESVPNPAQEGSYL----DEGEL-- 86
Query: 405 KNVSEPVTEPTPIPSLQDKTITSI--ACGNCVSFAIDSEGVLYGWGMGNGYQ--LG-NGK 459
+ P P+ +LQ+ ++ A G+C+S A+ S+G LY WG + LG + K
Sbjct: 87 ------ESYPHPVQTLQENNFRAVKVAAGDCISAAVSSDGELYIWGTFKASEGTLGFSEK 140
Query: 460 EDDILEPMKIE------GKQLNNYTVLQVASGGQHSVILA 493
P +I+ Q N + +A+G H +IL+
Sbjct: 141 ARHQQVPQRIQLGPTTTRTQANPEKAVAIAAGNNHLLILS 180
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD---VMERKTFALV----------EDLDNVVEVVVGGMH 80
T G V CG+ D G+LGL D +R+ + +D D +V++ G +
Sbjct: 300 TSQGKVYACGRCDGGELGLSDDNEEFAQRRDPRFLDQPLQVSIPEQDEDPIVQISAGIEN 359
Query: 81 TVCLTEDGKVYTWGCNDEGALG 102
++ +T DG +Y WG G LG
Sbjct: 360 SMAVTRDGALYAWGQETNGELG 381
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 187/444 (42%), Gaps = 89/444 (20%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLK--LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P K V ++I SR + ++ C E +
Sbjct: 115 QLGLLGSEECIRVPRKSIFMPVDKNIRIKECKK----TASRKSWVSTLCSELAPDSHLA- 169
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA-D 268
E G+V + S + +G N Y QLG D
Sbjct: 170 --------------ESGQVAV------------------SASEVFCWGQNKYGQLGLGID 197
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ Q S P LIKSL F +A+G HS L G I+ +GR+ +G+LGL +
Sbjct: 198 CKKQTS-------PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 250
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
++ P + SL+ + I I CG + A+ EG ++ +G G
Sbjct: 251 NDRYV-PYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG---------------- 293
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGW 447
YG+LG + S + P + L +T IACG S + S G +Y +
Sbjct: 294 ----------YGQLGHNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 342
Query: 448 GMGNGYQLGNGKEDDILEPMKIEG 471
G+G QLG G + P ++G
Sbjct: 343 GLGGNGQLGTGSTSNRKSPFTVKG 366
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 39/275 (14%)
Query: 233 KHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
K + DV G+ +T F+ G++ G N+ QLG S + P + +L +
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK---------PEQVVALDAQ 84
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP-TPIPSLQDKTITSIA 350
++ G+ H+LALN +G++YA+G G+LGL E + P I DK I
Sbjct: 85 NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKE 144
Query: 351 CGN-----------CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
C C A DS G + S +++ +G++ Y
Sbjct: 145 CKKTASRKSWVSTLCSELAPDSHLAESG---------------QVAVSASEVFCWGQNKY 189
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 190 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 249
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
E+D P + K L + ++ + G H+ L K
Sbjct: 250 ENDRYVPYLL--KSLRSQKIVYICCGEDHTAALTK 282
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 139/324 (42%), Gaps = 61/324 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGR-------EAEGDSEFIPQTVNLPKKAVQISAG--------------DSHSVAL 135
+G LG S F+P N+ K + +A DSH L
Sbjct: 112 SDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSH---L 168
Query: 136 LEDGT-------VYAWGSFRDSHGSMGLKGEGI----QKTPLKLESVSGI--VKIASGAD 182
E G V+ WG ++ +G +GL GI Q +P ++S+ GI +++A+G
Sbjct: 169 AESGQVAVSASEVFCWG--QNKYGQLGL---GIDCKKQTSPQLIKSLLGIPFMQVAAGGA 223
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H +LT G + G + GQLG N R L+ L+ + I + G
Sbjct: 224 HSFVLTLSGAIFGWGRNKFGQLGL-----NDENDRYVPYLLK----SLRSQKIVYICCGE 274
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+T ++ +G + FG Y QLG + + P + L T +A G+
Sbjct: 275 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHE-------INPRKVFELMGSIVTQIACGRQ 327
Query: 302 HSLAL-NSEGKIYAFGRHDYGRLG 324
H+ A S G+IY+FG G+LG
Sbjct: 328 HTSAFVPSSGRIYSFGLGGNGQLG 351
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ V E + + D V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISD-RTVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLTARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 33/312 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + D +++ V G H++ L++ G++++WG
Sbjct: 53 GEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 97 DEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG DS +P+ + L ++ + Q+S G+ H +AL DG + WG ++SHG +
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG--KNSHGQL 169
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P ++ S+ GI ++A+G H L+ G + G GQLG ++
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 230 RE----------SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLK 326
+ EV P + L + T +A G+ H+LA S G IYAFG G+LG
Sbjct: 280 NDEV---------NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 327 NVSEPVTEPTPI 338
+ V P+P+
Sbjct: 331 HTCN-VKCPSPV 341
>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 837
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 204/459 (44%), Gaps = 64/459 (13%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKAV 123
V DL + + G HTV L DG V+ WG +D G LG D++ + + KAV
Sbjct: 381 VPDLADCKALSAGDEHTVALRADGTVWVWGTDDFGQLGNGGVPSDAKPVQAQGLMAVKAV 440
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADH 183
+AG+ +VA+ EDG+V+AWGS + +G +G + TP++L ++ ++ G+ H
Sbjct: 441 --AAGNDWTVAIGEDGSVWAWGS--NYYGQLGDGSRRSRSTPVRLAGLTEGKTVSVGSWH 496
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
V+L G+L T G LG T S + V +H
Sbjct: 497 AVLLRQDGSLRTWGSGYSDVLGDGTTYSKDAAPVQAPELSGVKAVAAAYEH--------- 547
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI--KSLSDKKFTMLASGQH 301
+ + G++ ++GLN QLG+ F P + + L T +A+G
Sbjct: 548 SVAVRGDGTVWSWGLNQDDQLGDGT-----------FRPSSVPVQVLGITGATAVAAGGD 596
Query: 302 ----HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
++AL +G ++++G + +G LG +P L D +T+IA GN +
Sbjct: 597 TLLAFTVALREDGTVWSWGNNYFGMLGHPAWPSTTQGAVQVPGLMD--VTAIAAGNLHAV 654
Query: 358 AIDSEGVLYGWGMGNGYQLGNG---KEDD---------------------ILNSEGKIYA 393
A+ G ++ WG + QLG+G + D L+ +G ++A
Sbjct: 655 ALRKNGSVWSWGRNSAGQLGDGTNIQRDSPVPLRELANVKAITAGRDFAVALHDDGTVWA 714
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G +D G+LG + T P P + ++ G+ + A+ ++G ++ WG +
Sbjct: 715 WGANDSGQLGDGTFA---TRPLPQQVQGLTGVVAVDAGDDHTLALRNDGTVWAWGNNDLG 771
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G P++++G + V VA+G SV+L
Sbjct: 772 QLGDGTRTTQPTPVQMQGFR----KVSAVAAGFISSVVL 806
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 189/448 (42%), Gaps = 71/448 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G D GQLG G + K + L V V G TV + EDG V+ WG N
Sbjct: 404 GTVWVWGTDDFGQLGNGGVPSDAKPVQ-AQGLMAVKAVAAGNDWTVAIGEDGSVWAWGSN 462
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + S P + + +S G H+V L +DG++ WGS G +
Sbjct: 463 YYGQLG-DGSRRSRSTPVRLAGLTEGKTVSVGSWHAVLLRQDGSLRTWGS-----GYSDV 516
Query: 157 KGEGI----QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G+G P++ +SG+ +A+ +H V + G + + G + QLG T R
Sbjct: 517 LGDGTTYSKDAAPVQAPELSGVKAVAAAYEHSVAVRGDGTVWSWGLNQDDQLGDGTFR-- 574
Query: 213 SRNARRGMSFLEPGEVPLKRKHID---DVFTG-----VYNTFISSKGSILAFGLNNYSQL 264
P VP++ I V G + + G++ ++G N + L
Sbjct: 575 ------------PSSVPVQVLGITGATAVAAGGDTLLAFTVALREDGTVWSWGNNYFGML 622
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G G P L+ T +A+G H++AL G ++++GR+ G+LG
Sbjct: 623 GHPAWPSTTQG--AVQVPGLMD------VTAIAAGNLHAVALRKNGSVWSWGRNSAGQLG 674
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG----- 379
+ +P+P + + +I G + A+ +G ++ WG + QLG+G
Sbjct: 675 DGT---NIQRDSPVPLRELANVKAITAGRDFAVALHDDGTVWAWGANDSGQLGDGTFATR 731
Query: 380 ----------------KEDD---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
DD L ++G ++A+G +D G+LG + T+PTP+
Sbjct: 732 PLPQQVQGLTGVVAVDAGDDHTLALRNDGTVWAWGNNDLGQLGDGTRT---TQPTPVQMQ 788
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWG 448
+ ++++A G S + G ++GWG
Sbjct: 789 GFRKVSAVAAGFISSVVLLENGTVWGWG 816
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 205/525 (39%), Gaps = 96/525 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + T G QLG R T V L + VG HTV L +DG V+TWG N
Sbjct: 209 GSIWTWGSNAASQLGADISAGSRVTPMQVPGLTGATAIAVGDSHTVALLKDGSVWTWGDN 268
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR-------- 148
G LG IP V V I+AG S +VA+ +DGTV+ WG+ +
Sbjct: 269 RSGQLGDAGRESQNHIPAQVPGLASVVAIAAGGSRTVAVRQDGTVWTWGTKQSNRQDFNP 328
Query: 149 -----------------DSH-------------GSMGLKGEGIQ---KTPLKLESVSGIV 175
D+H G L G Q P+++ ++
Sbjct: 329 TPVQVPGLTDVIAADASDNHVVVLRTDGTVWGWGRANLLGGSTQDWLTMPVQVPDLADCK 388
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+++G +H V L + G + G + GQLG S ++ + G + +K
Sbjct: 389 ALSAGDEHTVALRADGTVWVWGTDDFGQLGNGGVPSDAKPVQ------AQGLMAVKAVAA 442
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ +T I GS+ A+G N Y QLG+ + TP + L++ K
Sbjct: 443 GNDWT----VAIGEDGSVWAWGSNYYGQLGDGSRRSRS-------TPVRLAGLTEGK--T 489
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++ G H++ L +G + +G LG P P L + ++A
Sbjct: 490 VSVGSWHAVLLRQDGSLRTWGSGYSDVLGDGTTYSKDAAPVQAPELSG--VKAVAAAYEH 547
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGK----------------------EDDI------LNS 387
S A+ +G ++ WG+ QLG+G D + L
Sbjct: 548 SVAVRGDGTVWSWGLNQDDQLGDGTFRPSSVPVQVLGITGATAVAAGGDTLLAFTVALRE 607
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+G ++++G + +G LG +P L D +T+IA GN + A+ G ++ W
Sbjct: 608 DGTVWSWGNNYFGMLGHPAWPSTTQGAVQVPGLMD--VTAIAAGNLHAVALRKNGSVWSW 665
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G + QLG+G P+ + ++L N V + +G +V L
Sbjct: 666 GRNSAGQLGDGTNIQRDSPVPL--RELAN--VKAITAGRDFAVAL 706
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 123/553 (22%), Positives = 215/553 (38%), Gaps = 111/553 (20%)
Query: 19 KVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQ-LGLGPDVMERKTFALV-----EDLDNVV 72
KVF +E T +T G + QG + + +GP+ + +T V +D+ N +
Sbjct: 69 KVFAATERTQTFTWETSVGTLEVSTQGTVSEAVWVGPECLPSETLPTVRVTIADDVGNSI 128
Query: 73 ----EVVVGGM---------------HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
+ ++GG+ H + +TE KV WG N+ LGR G+ ++
Sbjct: 129 FESFQPLLGGLTCGTRGLVIAAGVGRHALVVTEQQKVQAWGNNESTQLGR---GEPQY-- 183
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
+TV+ + + +H AL EDG+++ WGS S + G + TP+++ ++G
Sbjct: 184 RTVSGLTGVTAVKSRLAHVAALKEDGSIWTWGSNAASQLGADIS-AGSRVTPMQVPGLTG 242
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IA G H V L G++ T G GQLG A R ++ + P +VP
Sbjct: 243 ATAIAVGDSHTVALLKDGSVWTWGDNRSGQLG-----DAGRESQNHI----PAQVPGLAS 293
Query: 234 HIDDVFTGVYNTFISSKGSILAFGL---------------------------NNYSQLGE 266
+ G + G++ +G +N+ +
Sbjct: 294 VVAIAAGGSRTVAVRQDGTVWTWGTKQSNRQDFNPTPVQVPGLTDVIAADASDNHVVVLR 353
Query: 267 ADSEVQKSGNTCFF---------TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
D V G P + L+D K L++G H++AL ++G ++ +G
Sbjct: 354 TDGTVWGWGRANLLGGSTQDWLTMPVQVPDLADCK--ALSAGDEHTVALRADGTVWVWGT 411
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG V ++ P+ + + ++A GN + AI +G ++ WG QLG
Sbjct: 412 DDFGQLGNGGVP---SDAKPVQAQGLMAVKAVAAGNDWTVAIGEDGSVWAWGSNYYGQLG 468
Query: 378 NGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
+G +L +G + +G LG
Sbjct: 469 DGSRRSRSTPVRLAGLTEGKTVSVGSWHAVLLRQDGSLRTWGSGYSDVLGDGTTYSKDAA 528
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P P L + ++A S A+ +G ++ WG+ QLG+G P + +
Sbjct: 529 PVQAPELSG--VKAVAAAYEHSVAVRGDGTVWSWGLNQDDQLGDGT----FRPSSVPVQV 582
Query: 474 LNNYTVLQVASGG 486
L VA+GG
Sbjct: 583 LGITGATAVAAGG 595
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 163/399 (40%), Gaps = 69/399 (17%)
Query: 121 KAVQISAG-DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ + I+AG H++ + E V AWG+ + +G +GE +T + ++G+ + S
Sbjct: 144 RGLVIAAGVGRHALVVTEQQKVQAWGNNESTQ--LG-RGEPQYRT---VSGLTGVTAVKS 197
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
H L G++ T G QLG S +R + P +VP
Sbjct: 198 RLAHVAALKEDGSIWTWGSNAASQLGA----DISAGSR-----VTPMQVPGLTGATAIAV 248
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+ + GS+ +G N QLG+A E Q P + L+ +A+G
Sbjct: 249 GDSHTVALLKDGSVWTWGDNRSGQLGDAGRESQN------HIPAQVPGLA--SVVAIAAG 300
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI--PSLQDKTITSIACGNCVSF 357
++A+ +G ++ +G R PTP+ P L D I + A N V
Sbjct: 301 GSRTVAVRQDGTVWTWGTKQSNRQDFN--------PTPVQVPGLTD-VIAADASDNHV-V 350
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDI------------------------LNSEGKIYA 393
+ ++G ++GWG N LG +D + L ++G ++
Sbjct: 351 VLRTDGTVWGWGRAN--LLGGSTQDWLTMPVQVPDLADCKALSAGDEHTVALRADGTVWV 408
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G D+G+LG V ++ P+ + + ++A GN + AI +G ++ WG
Sbjct: 409 WGTDDFGQLGNGGVP---SDAKPVQAQGLMAVKAVAAGNDWTVAIGEDGSVWAWGSNYYG 465
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G P+++ G V+ G H+V+L
Sbjct: 466 QLGDGSRRSRSTPVRLAGLTEGK----TVSVGSWHAVLL 500
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G D+GQLG G R V+ L VV V G HT+ L DG V+ WG N
Sbjct: 710 GTVWAWGANDSGQLGDG-TFATRPLPQQVQGLTGVVAVDAGDDHTLALRNDGTVWAWGNN 768
Query: 97 DEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSF 147
D G LG +G P V + +K ++AG SV LLE+GTV+ WG++
Sbjct: 769 DLGQLG---DGTRTTQPTPVQMQGFRKVSAVAAGFISSVVLLENGTVWGWGAY 818
>gi|402590741|gb|EJW84671.1| hypothetical protein WUBG_04417 [Wuchereria bancrofti]
Length = 554
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 188/392 (47%), Gaps = 47/392 (11%)
Query: 27 VPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL--VEDLDNVVEVVVGGMHTVCL 84
+PT K G VL+CG+G+ QLG RK A+ + + +V+V+ GG+H++ L
Sbjct: 137 LPTEK----GDRVLSCGEGE--QLGHPGRSTTRKPRAISTLPEEKLIVQVIAGGVHSLVL 190
Query: 85 TEDGKVYTWGCNDEG---ALGREAEGDSE------FIPQTVNLPKKAVQISAGDSHSVAL 135
EDG VY G N++G A G E EG S+ F + K V ++AG S S AL
Sbjct: 191 MEDGTVYGCGINEKGTVPAEGIEPEGSSDKLTPIKFSDSLIQRHGKVVMLTAGASFSAAL 250
Query: 136 LEDGTVYAWGSFR------DSHGSMGLKGEGIQKTPLKL--ESVSGIVKIASGADHFVML 187
+ G+V AWG+ R +SH ++ ++K P+ + IVKIA+G +H VML
Sbjct: 251 TDKGSVIAWGNLRGMSGCIESHETL----LEMEKQPVVIVQHHQKVIVKIAAGENHLVML 306
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL------KRKHI--DDVF 239
T G +LT G GQLGR ++ S R+ R M P + + K+K + +++
Sbjct: 307 TENGEVLTFGDGSVGQLGRCSRVSHIRSQR--MVNDSPDSLRISVYDKGKKKLVIFNNIM 364
Query: 240 TGVYNTFISS-KGSILAFGLNNYSQLGEADSEVQKS--GNTCFFTPHLIKSLSDKKFTML 296
G + T S G I GLNN+ QLG E ++ H IK+ + + ++
Sbjct: 365 AGGFWTAARSIDGVIYVCGLNNFGQLGVPTPEALENEVDEPELKIMHPIKASAFESTAVV 424
Query: 297 A-SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD----KTITSIAC 351
SG H +ALN++G++Y G++ LGL S + LQ + I I+
Sbjct: 425 ELSGIQHIIALNTQGEVYGIGKNTDNALGLGTWSGKEDDHWKYSELQKIDVPEQIKGISS 484
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
S G Y WG + QLG G +DD
Sbjct: 485 SLGCSIVWTDGGNAYSWGYDSSGQLGLGIKDD 516
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 172/416 (41%), Gaps = 79/416 (18%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEGIQK--TPLK-----LESV 171
K VQ+ AG HS+ L+EDGTVY G + + + + G++ EG TP+K ++
Sbjct: 175 KLIVQVIAGGVHSLVLMEDGTVYGCGINEKGTVPAEGIEPEGSSDKLTPIKFSDSLIQRH 234
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+V + +GA LT +G+++ G R S + LE + P+
Sbjct: 235 GKVVMLTAGASFSAALTDKGSVIAWG----------NLRGMSGCIESHETLLEMEKQPVV 284
Query: 232 -RKHIDDVFTGV-----YNTFISSKGSILAFGLNNYSQLGEADSEVQ-KSGNTCFFTPHL 284
+H V + + ++ G +L FG + QLG +S +P
Sbjct: 285 IVQHHQKVIVKIAAGENHLVMLTENGEVLTFGDGSVGQLGRCSRVSHIRSQRMVNDSPDS 344
Query: 285 IK-SLSDKK------FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-------KNVSE 330
++ S+ DK F + +G + A + +G IY G +++G+LG+ V E
Sbjct: 345 LRISVYDKGKKKLVIFNNIMAGGFWTAARSIDGVIYVCGLNNFGQLGVPTPEALENEVDE 404
Query: 331 P---VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDD 383
P + P + + + ++ + A++++G +YG G LG +GKEDD
Sbjct: 405 PELKIMHPIKASAFESTAVVELSGIQHI-IALNTQGEVYGIGKNTDNALGLGTWSGKEDD 463
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS-IACGNCVSFAIDSEG 442
Y L +V E Q K I+S + C S G
Sbjct: 464 ------------HWKYSELQKIDVPE-----------QIKGISSSLGC----SIVWTDGG 496
Query: 443 VLYGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Y WG + QLG G +DD + P KI L+ Y ++ V+ H++ LAK
Sbjct: 497 NAYSWGYDSSGQLGLGIKDDDEKMVPRPQKITSAHLDGYRIVGVSLADNHALFLAK 552
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 166/406 (40%), Gaps = 68/406 (16%)
Query: 112 IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV 171
+P V KKAV ++ G H + DG ++ WG+ GL Q TP ++E+
Sbjct: 1024 MPPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETF 1083
Query: 172 --SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
S I+ I+ G +H V + + + G GQLG L P +P
Sbjct: 1084 KSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGH--------------GVLTPQNLP 1129
Query: 230 LKRKHIDD---------VFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCF 279
K I+D + TG +T + K G + FG N+ QLG + +
Sbjct: 1130 ---KKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGN--FKNRAVPMR 1184
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
I + ++ T +A+G HS+ G IY++G + G+LG N+ E P I
Sbjct: 1185 IETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNI-EKSLRPKQID 1243
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN------------- 386
L+ K I I+CG+ + AI +Y WG G LGNG + L+
Sbjct: 1244 ELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIE 1303
Query: 387 -------------------SEGKIYAFGRHDYGRLG----LKNVSEPVTEPTPIPSLQDK 423
G +Y G ++G+LG LK P IPSL
Sbjct: 1304 KVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSM 1363
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
I + G+ S I + G LY WG GN Q+GNGK +D+ P KI
Sbjct: 1364 NIVGFSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKI 1409
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V +A G +H +++S G L T G QGQLG ++ R + + +
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPI------ 1088
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP-HLIKSLSD--- 290
I G ++ + I ++G + Y QLG TP +L K + D
Sbjct: 1089 IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG-----------VLTPQNLPKKIEDFTG 1137
Query: 291 -KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL---KNVSEPV-TEPTPIPSLQDKT 345
+K +A+G H++ L G ++ FG +D G+LGL KN + P+ E + I + +
Sbjct: 1138 GQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGER 1197
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
IT+IA G+ S G +Y WG N K G+LG
Sbjct: 1198 ITAIAAGHSHSIMCLDNGDIYSWG-------ANSK-------------------GQLGHG 1231
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
N+ E P I L+ K I I+CG+ + AI +Y WG G LGNG + L
Sbjct: 1232 NI-EKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELS 1290
Query: 466 PMKIE 470
P IE
Sbjct: 1291 PKMIE 1295
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 36/245 (14%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPS 340
P L+K+ +KK +A G H ++S+G+++ +G + G+LG NV + + P + +
Sbjct: 1025 PPLVKN--EKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVET 1082
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---------KEDD-------- 383
+ I I+CG S A+D +Y WG QLG+G K +D
Sbjct: 1083 FKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVL 1142
Query: 384 ----------ILNSEGKIYAFGRHDYGRLGL---KNVSEPV-TEPTPIPSLQDKTITSIA 429
+L G ++ FG +D G+LGL KN + P+ E + I + + IT+IA
Sbjct: 1143 AIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIA 1202
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G+ S G +Y WG + QLG+G + L P +I+ +L +++++ G H+
Sbjct: 1203 AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQID--ELKGKPIIKISCGHFHT 1260
Query: 490 VILAK 494
V +++
Sbjct: 1261 VAISE 1265
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 54/333 (16%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-------DN 70
QKV + G + T G D+GQLGLG + R +E +
Sbjct: 1139 QKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLG-NFKNRAVPMRIETSEIVGIHGER 1197
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAG 128
+ + G H++ ++G +Y+WG N +G LG + P+ ++ K ++IS G
Sbjct: 1198 ITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH-GNIEKSLRPKQIDELKGKPIIKISCG 1256
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVM 186
H+VA+ E +VY WG + H +G + +P +E I K+ G H
Sbjct: 1257 HFHTVAISELNSVYCWG--QGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTAT 1314
Query: 187 LTS------RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE---PGEVP-LKRKHID 236
+T+ RGN+ G E G+LG F + P +P L +I
Sbjct: 1315 VTAAENGSDRGNVYICGGGEHGKLG--------TGGDLKTPFFDKPHPAVIPSLNSMNIV 1366
Query: 237 DVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+G ++ I++ G++ +G N+ Q+G +E + P I SL+D++F +
Sbjct: 1367 GFSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTE-------DMWLPTKI-SLNDQRFML 1418
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
NS+G F + Y + GL++V
Sbjct: 1419 FNQ--------NSKG----FAKARYSQEGLEDV 1439
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKV 90
G V CG G+ G+LG G D+ ++ A++ L+ N+V G + +T +G +
Sbjct: 1325 GNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGAL 1384
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVA---LLEDGTVYAWGSF 147
YTWG + G +G + + ++P ++L + + +S A ++G S+
Sbjct: 1385 YTWGYGNFGQIGN-GKTEDMWLPTKISLNDQRFMLFNQNSKGFAKARYSQEGLEDVLKSY 1443
Query: 148 RDSHGSMGLKGEGIQ 162
+S+ S + + IQ
Sbjct: 1444 SNSYRSFAIINKAIQ 1458
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 66/411 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V CGQ G+LG E+ +LV+ L +V+V G + LTE+GKVY G N
Sbjct: 42 VFACGQNRKGELG-HSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLN 100
Query: 97 DEGALGRE-----AEGDSEF---IPQTVNLPK--KAVQISA--GDSHSVALLEDGTVYAW 144
G L RE A E+ I LP K VQ+S G H + + G VY+
Sbjct: 101 STGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSC 160
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD--HFVMLTSRGNLLTAGCPEQG 202
G ++HG +GL + + L +ES+ + +++ H V+++S G+ + G + G
Sbjct: 161 GC--NNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCG 218
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV-FTGVYNT-FISSKGSILAFGLNN 260
QLG T+ + L P V L H+ + G Y+T F++ +G + + G N
Sbjct: 219 QLGIGTRPNQ----------LLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNL 268
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
QLG + S N P LI +L ++ +M+A G H+ + +GK++ FG +
Sbjct: 269 NGQLGLGS---RSSTN----VPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQ 321
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
G+LGL + ++ V+ P + +L++ + I+CG F
Sbjct: 322 GQLGLGH-TDSVSSPMQVETLRNVKVVKISCGT--HFTC--------------------- 357
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+L+ G++++FG + +G+LGL + ++ + P +PS+ K ++ IACG
Sbjct: 358 ---VLSESGELWSFGCNCHGQLGLGDSTDRLV-PVLVPSMTKKNLSEIACG 404
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 189/423 (44%), Gaps = 65/423 (15%)
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK-AVQISAGDSHSVALLEDGTVYAWG 145
D V+ G N +G LG + + +L +K V+++AG S L E+G VY G
Sbjct: 39 DCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG 98
Query: 146 S------FRDSH-GSMGLKGEGIQKTPLK--LESVSGIVKIA--SGADHFVMLTSRGNLL 194
R++H GS E L L +V+++ +GA+H +++TS G +
Sbjct: 99 LNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVY 158
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGV---YNTFISSK 250
+ GC GQLG G + + P + ++ KH+ + ++ +SS
Sbjct: 159 SCGCNNHGQLGL------------GSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSD 206
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
GS +FGLN+ QLG Q PH ++ S + A GQ+H++ L EG
Sbjct: 207 GSAFSFGLNDCGQLGIGTRPNQ-------LLPHRVELPSPHLVRLAACGQYHTIFLTEEG 259
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+++ G++ G+LGL + S PT I +LQ++ + IACG
Sbjct: 260 MVFSCGKNLNGQLGLGSRSS-TNVPTLIAALQERPASMIACGY----------------- 301
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
++ +GK++ FG + G+LGL + ++ V+ P + +L++ + I+C
Sbjct: 302 ---------SHTCVVLEDGKLFTFGYNHQGQLGLGH-TDSVSSPMQVETLRNVKVVKISC 351
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G + + G L+ +G QLG G D L P+ + N + ++A G H V
Sbjct: 352 GTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLS--EIACGFHHLV 409
Query: 491 ILA 493
++
Sbjct: 410 AIS 412
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 162/363 (44%), Gaps = 46/363 (12%)
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
D V+A G R E ++ + ++ IVK+A+G++ LT G + G
Sbjct: 39 DCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG 98
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGE-VPLKRKHID-DVFTGVYNTFI-SSKGSIL 254
GQL R T + ++ ++ S +E E +P K + F G + + +S G +
Sbjct: 99 LNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVY 158
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+ G NN+ QLG +++ S L++SL + + HHS+ ++S+G ++
Sbjct: 159 SCGCNNHGQLGLGSTKMSPS-------LLLVESLKHVRVLSASCSYHHSVVVSSDGSAFS 211
Query: 315 FGRHDYGRLGL---KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
FG +D G+LG+ N P P P L + ACG
Sbjct: 212 FGLNDCGQLGIGTRPNQLLPHRVELPSPHL----VRLAACGQ------------------ 249
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
L EG +++ G++ G+LGL + S PT I +LQ++ + IACG
Sbjct: 250 --------YHTIFLTEEGMVFSCGKNLNGQLGLGSRSS-TNVPTLIAALQERPASMIACG 300
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ + +G L+ +G + QLG G D + PM++E L N V++++ G + +
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVE--TLRNVKVVKISCGTHFTCV 358
Query: 492 LAK 494
L++
Sbjct: 359 LSE 361
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 39/309 (12%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
KV++ N ++ V V + A G V +CG + GQLGLG M + LVE
Sbjct: 135 KVVQVSCFNGAEHVLVVTSA----------GQVYSCGCNNHGQLGLGSTKMS-PSLLLVE 183
Query: 67 DLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAV 123
L + V+ H+V ++ DG +++G ND G LG + + +P V LP V
Sbjct: 184 SLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPN-QLLPHRVELPSPHLV 242
Query: 124 QISA-GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG 180
+++A G H++ L E+G V++ G ++ +G +GL P + ++ IA G
Sbjct: 243 RLAACGQYHTIFLTEEGMVFSCG--KNLNGQLGLGSRSSTNVPTLIAALQERPASMIACG 300
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVF 239
H ++ G L T G QGQLG S S P +V L+ + +
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVS----------SPMQVETLRNVKVVKIS 350
Query: 240 TGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G + T + S G + +FG N + QLG DS + P L+ S++ K + +A
Sbjct: 351 CGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDR-------LVPVLVPSMTKKNLSEIAC 403
Query: 299 GQHHSLALN 307
G HH +A++
Sbjct: 404 GFHHLVAIS 412
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 29/336 (8%)
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT 115
V E + + + D ++ EV GG H++ L EDG+VYT G N +G LG E EG+ P+
Sbjct: 23 VTEPQAYGFISD-RSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK---PEQ 78
Query: 116 VN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVS 172
+ + V ++ G+SHS+AL + G +++WG+ D G +G E P ++ ++
Sbjct: 79 IGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD--GQLGHTTTEDSVAIPRLIKKLN 136
Query: 173 G--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
I++++ G H + L + G T G GQLG + + + +R S +PL
Sbjct: 137 QQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL---EGIPL 193
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ V G ++F +S G++ +G NN QLG +D ++S P +K L
Sbjct: 194 AQ-----VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQS-------PCHVKLLR 241
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K ++ G+ H+ L G ++ FG +G+LG ++++ V P + L +T I
Sbjct: 242 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVN-PRRVLELMGSEVTQI 300
Query: 350 ACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
ACG + A + S G++Y +G G QLG G ++
Sbjct: 301 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 336
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 175/402 (43%), Gaps = 62/402 (15%)
Query: 141 VYAWGSFRDSH-GSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
+ WG + H G + +GI P +S I ++A G +H + L G + T G
Sbjct: 1 MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+GQLG +R ++ + G L +HI V G ++ +S +G + ++
Sbjct: 61 SNTKGQLGH--EREGNKPEQIG---------ALADQHIVHVACGESHSLALSDQGQLFSW 109
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + QLG +E + P LIK L+ + ++ G H +AL ++G+ + +G
Sbjct: 110 GAGSDGQLGHTTTEDSVA------IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWG 163
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
++ +G+LGL P + SL+ + +A G SFA+ G ++GWG N QL
Sbjct: 164 QNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQL 223
Query: 377 GNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G E D +L G ++ FG +G+LG ++++
Sbjct: 224 GLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDE 283
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P + L +T IACG + A + S G++Y +G G QLG G ++ P +
Sbjct: 284 VN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 342
Query: 470 EGK------QLNN-------YTVLQVASGGQHSVILAKPKPN 498
+G QL++ + V + SGG + +L N
Sbjct: 343 KGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVLCSKYEN 384
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P F++ ++ + C GG G V TCG GQLG + + + +
Sbjct: 26 PQAYGFISDRSIKEVAC--GGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQIGALA 83
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
D ++V V G H++ L++ G++++WG +G LG DS IP+ + + +Q
Sbjct: 84 D-QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQ 142
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG R HG +GL E Q +P +++S+ GI ++A+G
Sbjct: 143 VSCGNWHCMALAADGQFFTWGQNR--HGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGG 200
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG + R+ P V L R + + +
Sbjct: 201 AHSFALSLSGAVFGWGRNNAGQLGL-----SDETDRQ-----SPCHVKLLRTQKVVYISC 250
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG ++ QLG + EV P + L + T +A
Sbjct: 251 GEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---------NPRRVLELMGSEVTQIA 301
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LA S G IYAFG G+LG + V P+P+
Sbjct: 302 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 342
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 217/483 (44%), Gaps = 65/483 (13%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
VL+ GQ GQLG + E ++E L +++ V G H++ ++ G VY+WG +
Sbjct: 3 VLSVGQSKNGQLG-HDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRS 61
Query: 97 DEGALGR-EAEGDSE---FIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFR 148
EG LG + G S+ F+ + + ++ ++++ G+ HS+AL + G VY WG
Sbjct: 62 KEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLH 121
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA----------GC 198
S ++ L ++S +G++++ + ++ S L+
Sbjct: 122 RLDES---------QSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTK 172
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGE-VPLKRKHIDDVFTGV-----YNTFISSKGS 252
P+ + SA ++ ++ + +P++ + I + V ++ ++ G
Sbjct: 173 PKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGR 232
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ +G N QLG GN F TP L+K+L D + G+ H A+ +G+
Sbjct: 233 LYTWGFNEKGQLG--------LGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGE 284
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITSIACGNCVSFAIDSEGVLYGWG 369
+Y++G +G+LG NV + P I + + I +ACG+ + +G+LY +G
Sbjct: 285 VYSWGLGVFGQLGHGNV-KSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFG 343
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G QLG+ +E L+ G+ F + P + SL+ K I ++A
Sbjct: 344 HGEYGQLGSTEETQHLDFGGRDNHF---------------KYSIPIVVKSLETKKIKNVA 388
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ + + E +Y WG G+ LG G + L P I L+ + + +G +H+
Sbjct: 389 CGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITS--LSGEEIASITAGEKHT 446
Query: 490 VIL 492
+++
Sbjct: 447 IVV 449
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 121/298 (40%), Gaps = 40/298 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G + T G + GQLGLG T LV+ L N+V VV G H +T+ G+VY
Sbjct: 228 TKSGRLYTWGFNEKGQLGLGNRWF-HSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVY 286
Query: 92 TWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+WG G LG ++ + I Q V L ++ Q++ G + ++ G +YA+G
Sbjct: 287 SWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFG--- 343
Query: 149 DSHGSMGLKG--EGIQ-------------KTPLKLESVS--GIVKIASGADHFVMLTSRG 191
HG G G E Q P+ ++S+ I +A G H +++T
Sbjct: 344 --HGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDEN 401
Query: 192 NLLTAGCPEQGQLGRITQR-SASRNARRGMSFLEPGEVPLKRKHI-----DDV--FTGVY 243
+ G G LG +R +S E + KH DV F Y
Sbjct: 402 EVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHTIVVRCSDVTSFAYDY 461
Query: 244 NTFISSKG-SILAFGLNN---YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+ I+ K + L F + + YS S QK + F+ I S+ K ++A
Sbjct: 462 KSLINEKKYADLIFKVQDKKIYSHSLFIKSRCQKLYSIILFSSRFINQYSNNKQVVVA 519
>gi|146332865|gb|ABQ22938.1| regulator of chromosome condensation-like protein [Callithrix
jacchus]
Length = 195
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 30/174 (17%)
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGN---------------------------GKEDD 383
CG +FAI EG +YG+G+ N +QLG G+
Sbjct: 21 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVRFSGGQHHT 80
Query: 384 I-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ ++SEGK Y+ GR +YGRLGL +E + PT I L ++S+ACG V +A+ +G
Sbjct: 81 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDG 138
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
++ WGMG YQLG G+++D P+++ GKQL N VL V+SGGQH+V+L K K
Sbjct: 139 RVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 192
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 14/157 (8%)
Query: 232 RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
R H+ D F G Y TF IS +G + FGL+NY QLG +E +CF P + S
Sbjct: 11 RGHVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTE------SCFI-PQNLTSF 63
Query: 289 --SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
S K + + GQHH++ ++SEGK Y+ GR +YGRLGL +E + PT I L +
Sbjct: 64 KNSTKSWVRFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAV 121
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 122 SSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 158
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G HTVC+ +GK Y+ G + G LG + + IP ++ ++ G S A+
Sbjct: 76 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVT 135
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEG---IQKTPLKLESVSGIVKIASGADHFVML 187
+DG V+AWG + G + ++ T +LE+ ++ ++SG H V+L
Sbjct: 136 KDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV-VLSVSSGGQHTVLL 188
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 82 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 141
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 142 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 191
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 156/363 (42%), Gaps = 52/363 (14%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTA 196
+ WG+ S G +GL G E + P + E G + + G H V L G + T
Sbjct: 1 MLCWGN--ASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
GC + GQLG R V L ++I V G +T ++ KG + A
Sbjct: 59 GCNDLGQLGHEKARKKPEQV-----------VSLDAQNIVAVSCGEAHTLALNDKGQVFA 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GL + QLG + E C P +KSLS+ T +A G HSLAL G+I+++
Sbjct: 108 WGLGSDGQLGLSIVE------DCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G++ YG+LGL V P I SLQ I+ G SF + G ++GWG Q
Sbjct: 162 GQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQ 221
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG G DD L EG ++ FG YG+LG + +
Sbjct: 222 LGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
V P + L ++ IACG + A I S G + +G+G QLG + + P
Sbjct: 282 EVN-PRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTP 340
Query: 469 IEG 471
++G
Sbjct: 341 VKG 343
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 176/350 (50%), Gaps = 33/350 (9%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG ++E + E V +V G HTV L EDG VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEG-KRVRDVGCGRRHTVFLLEDGTVYTCG 59
Query: 95 CNDEGALGRE-AEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CND G LG E A E Q V+L + V +S G++H++AL + G V+AWG S G
Sbjct: 60 CNDLGQLGHEKARKKPE---QVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWG--LGSDG 114
Query: 153 SMGLK-GEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E + P ++S+S I ++A G H + L G + + G + GQLG + Q
Sbjct: 115 QLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLG-LGQ 173
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ A + + + L+ +P + + G ++F ++ G+I +G N + QLG D
Sbjct: 174 QGACVCSPQVIQSLQG--IPFGQ-----ISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
++ ++ P L+K+L ++ + G+ H+ AL EG ++ FG YG+LG +
Sbjct: 227 NDDRR-------FPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLG 377
+ V P + L ++ IACG + A I S G + +G+G QLG
Sbjct: 280 NHEVN-PRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG 328
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 148/311 (47%), Gaps = 31/311 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD N+V V G HT+ L + G+V+ WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG D +P+TV + Q++ G HS+AL G +++WG ++ +G
Sbjct: 110 LGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWG--QNKYG 167
Query: 153 SMGLKGEG-IQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL +G +P ++S+ GI +I++G H LT G + G + GQLG
Sbjct: 168 QLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGL--- 224
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
+ RR L+ L+ + + + G +T ++ +G + FG Y QLG
Sbjct: 225 --GDNDDRRFPVLLK----TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA-LNSEGKIYAFGRHDYGRLGLKN 327
+ + P + L + +A G+ H+LA + S GKI +FG G+LG ++
Sbjct: 279 TNHE-------VNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRS 331
Query: 328 VSEPVTEPTPI 338
++ PTP+
Sbjct: 332 TCNRIS-PTPV 341
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G +G+LGL + E V EP + K + + CG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGR----------------- 43
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ L +G +Y G +D G+LG + + +P + SL + I +++C
Sbjct: 44 ---------RHTVFLLEDGTVYTCGCNDLGQLGHEKARK---KPEQVVSLDAQNIVAVSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE-PMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG+G+ QLG +D L P + K L+ + QVA G HS
Sbjct: 92 GEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTV--KSLSEVHITQVACGYWHS 149
Query: 490 VILAK 494
+ LA+
Sbjct: 150 LALAR 154
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTW 93
GG + + GQ GQLGLG + +++ L + ++ GG H+ LT G ++ W
Sbjct: 155 GGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G N G LG D F L ++ V I G+ H+ AL ++G V+ +G+ +G
Sbjct: 215 GRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGA--GGYG 272
Query: 153 SMGLKGEGIQKTPLKLESVSGIV--KIASGADH-FVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G + P K+ + G V +IA G H + S G + + G GQLG T+
Sbjct: 273 QLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG--TR 330
Query: 210 RSASR 214
+ +R
Sbjct: 331 STCNR 335
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG EG+ P+ + + V ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHGREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
E ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EEDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 172/400 (43%), Gaps = 63/400 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
+GQLG + R G +P ++ L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLG---------HGREGN---KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA 110
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 111 GSDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKN 164
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 165 SHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 379 GKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
E+D +L G ++ FG G+LG ++++ V
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 413 EPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 -PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Query: 472 -------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 344 YWAAHRGQLSATADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG G + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
V V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL K Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG + P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|443918756|gb|ELU39128.1| poly(a)+ RNA transport protein [Rhizoctonia solani AG-1 IA]
Length = 634
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 194/454 (42%), Gaps = 90/454 (19%)
Query: 4 LLKKVLRKQAENPSQKVFVTS-EAVPTLKCKTGGGV-VLTCGQGDTGQLGLGPDVM---- 57
LL R++ + P K T+ +VP + +L G GD+ Q G+GP+
Sbjct: 154 LLSNSSRRRGQPPKPKPAGTALNSVPAIPEHPRPAYQILVFGNGDSSQFGMGPNATGEYP 213
Query: 58 ---ERKTFALVEDLDN-------VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
+K F D V + GG+HT+ + E GKV+TWG ND+GALGR EG
Sbjct: 214 RPRMQKFFKTASDEGKLGGEGAGVESLAAGGLHTLAIDEAGKVWTWGTNDDGALGRLVEG 273
Query: 108 D-------------SEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+E P +N +AV ++AG++ S+AL GT G R +
Sbjct: 274 PDPEDPSKTIDSDVAESTPTVLNTLAEEQFRAVSVAAGNNVSLAL---GTN---GQLRGA 327
Query: 151 HGSMGLKGEG-IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G G G IQ P LE+++ V+IA G DH + LT G++ G EQ QLGR
Sbjct: 328 FGFDGRPGSARIQYLPTTLEALTKDVFVQIACGGDHCLALTESGHVYVWGTGEQFQLGR- 386
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ R+ +RG+ F E L ++I + G Y++F I KG + A+GLN Q G
Sbjct: 387 --KVLERHKKRGL-FPE----KLHLRNIVSIGCGAYHSFAIDKKGVVYAWGLNVKRQCGI 439
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
E Q T H D + + G HHS+ + S+G++YA G +LG+
Sbjct: 440 PGEEDQILQPTPIPALHPDVLGHDARVIQASGGNHHSVFVTSDGRVYACGTLTDSQLGIG 499
Query: 327 N-----------------VSE--------------------PVTEPTPIPSLQDKTITSI 349
+ +SE P E + P I +
Sbjct: 500 DDHPAIVNPDDEEEAKFAMSEPVLVPFPPPPTADKLDPDVGPYAEASVYPPRT--PIVRV 557
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ G + A+ G +Y WG G +LG KE+D
Sbjct: 558 SVGTDYTLAVSKSGHVYSWGDGQSCELGLTKEED 591
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 155/401 (38%), Gaps = 83/401 (20%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+G+ +A+G H + + G + T G + G LGR+ + + + + P
Sbjct: 235 AGVESLAAGGLHTLAIDEAGKVWTWGTNDDGALGRLVEGPDPEDPSKTIDSDVAESTPTV 294
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF-FTPHLIKSLSD 290
++ + + + G+ ++ L QL A + G+ + P +++L+
Sbjct: 295 ---LNTLAEEQFRAVSVAAGNNVSLALGTNGQLRGAFGFDGRPGSARIQYLPTTLEALTK 351
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
F +A G H LAL G +Y +G + +LG K + L + I SI
Sbjct: 352 DVFVQIACGGDHCLALTESGHVYVWGTGEQFQLGRKVLERHKKRGLFPEKLHLRNIVSIG 411
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILN----------------------- 386
CG SFAID +GV+Y WG+ Q G G+ED IL
Sbjct: 412 CGAYHSFAIDKKGVVYAWGLNVKRQCGIPGEEDQILQPTPIPALHPDVLGHDARVIQASG 471
Query: 387 ---------SEGKIYAFGRHDYGRLGLKN-----------------VSE----------- 409
S+G++YA G +LG+ + +SE
Sbjct: 472 GNHHSVFVTSDGRVYACGTLTDSQLGIGDDHPAIVNPDDEEEAKFAMSEPVLVPFPPPPT 531
Query: 410 ---------PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
P E + P I ++ G + A+ G +Y WG G +LG KE
Sbjct: 532 ADKLDPDVGPYAEASVYPPRT--PIVRVSVGTDYTLAVSKSGHVYSWGDGQSCELGLTKE 589
Query: 461 DDILE-------PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+D E P +I K ++N+ V ++GGQH ++L K
Sbjct: 590 EDDEESVVQQKTPKRIVWKNVDNWFVQDASAGGQHCMLLVK 630
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 108/271 (39%), Gaps = 68/271 (25%)
Query: 253 ILAFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSLSDKK--------FTMLASGQH 301
IL FG + SQ G A E + FF K+ SD+ LA+G
Sbjct: 191 ILVFGNGDSSQFGMGPNATGEYPRPRMQKFF-----KTASDEGKLGGEGAGVESLAAGGL 245
Query: 302 HSLALNSEGKIYAFGRHDYGRLGL-----------KNVSEPVTEPTP--IPSLQDKTI-- 346
H+LA++ GK++ +G +D G LG K + V E TP + +L ++
Sbjct: 246 HTLAIDEAGKVWTWGTNDDGALGRLVEGPDPEDPSKTIDSDVAESTPTVLNTLAEEQFRA 305
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
S+A GN VS A+ + G L G AFG GR G
Sbjct: 306 VSVAAGNNVSLALGTNGQLRG-------------------------AFGFD--GRPGSAR 338
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+ PT + +L IACG A+ G +Y WG G +QLG +LE
Sbjct: 339 IQ---YLPTTLEALTKDVFVQIACGGDHCLALTESGHVYVWGTGEQFQLGR----KVLER 391
Query: 467 MKIEG---KQLNNYTVLQVASGGQHSVILAK 494
K G ++L+ ++ + G HS + K
Sbjct: 392 HKKRGLFPEKLHLRNIVSIGCGAYHSFAIDK 422
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4016 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4074 GKLGHGNRSPCDRP--RVIESLRGIEV------VDIAAGGAHSACITAAGDLFTWGKGRY 4125
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4126 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL D + + CG+ S A+ G +Y WG G
Sbjct: 4179 YGKLG-RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4229
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4230 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4270
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4271 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4325
Query: 497 P 497
P
Sbjct: 4326 P 4326
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3021
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 3022 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3081 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3132 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3185 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3236
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3237 -------------------DYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3277 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++SL+ + +A S HH LAL++ G+++++G D GRLG + + P+
Sbjct: 479 NSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I +L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG--LKGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGK+++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 3129
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3190 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3234
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3235 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3287 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 63/353 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG 180
VQI+ + + L +G VY D+ G P ++S++ IVKIA+
Sbjct: 455 VQIACAEKRFLILSRNGRVYTQAYNSDTLG------------PQLVQSLASRNIVKIAAH 502
Query: 181 AD--HFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+D H++ L++ G + + GC + G+LG T +S + G KH+
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG------KHVVH 556
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G Y+ I+++G + +G NY +LG SE Q P L+ L K +
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDV 609
Query: 297 A--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ SG +LA+ G+++++G DYG+LG + S+ P I LQD I + CG+
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQ 668
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSE 388
S A+ +G +Y WG G+ +LG+G E+ + L +
Sbjct: 669 FSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTED 728
Query: 389 GKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+++++G +D + +++P EP +P L K I IACG SFA S
Sbjct: 729 SEVHSWGSNDQCQHFDTLRITKP--EPAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 175/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V IA+G H +T+ G+L T G +G+ GR+
Sbjct: 4074 --GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG---KGRYGRL 4128
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 4129 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+D + G S+AL G +Y +G+ DY RL
Sbjct: 4182 LGRGGSDGCK-------VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4235 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4289
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4290 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 51/313 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 4040 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 4097
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G ++TWG +G GR GDSE P+ V + +
Sbjct: 4098 ----VVDIAAGGAHSACITAAGDLFTWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRV 4150
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4151 IDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVE 4208
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4209 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4258
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4259 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINR 4310
Query: 296 LASGQHHSLALNS 308
+A G H+LA ++
Sbjct: 4311 VACGSAHTLAWST 4323
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L+ +G+V++WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG---HGDTVPLEEPKLISALSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + +G + +LG E + P L++ L KK
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR-------YPKLLEGLKGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + +++P EP +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKP--EPAALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3075 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3107
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 3165
Query: 488 HSVILA 493
+ LA
Sbjct: 3166 DAQTLA 3171
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTED 87
+ G V + G GD G+LG G D + + L+ L +VV + G ++ +T +
Sbjct: 512 SANGEVFSWGCGDGGRLGHG-DTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
G++YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++
Sbjct: 571 GELYTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G KTP +E + IVK+ G+ + LT G + T G +
Sbjct: 630 WGD--GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+LG T+ R LE LK K + DV G + ++ + ++G N+
Sbjct: 688 QRLGHGTEEHV-----RYPKLLE----GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 261 YSQ 263
Q
Sbjct: 739 QCQ 741
>gi|197121464|ref|YP_002133415.1| chromosome condensation regulator RCC1 [Anaeromyxobacter sp. K]
gi|196171313|gb|ACG72286.1| regulator of chromosome condensation RCC1 [Anaeromyxobacter sp. K]
Length = 714
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 192/433 (44%), Gaps = 53/433 (12%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
V VG H + DG +TWG N G LG + LP + ++I+AG +H+
Sbjct: 194 RVAVGDWHAAAVKADGSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAEVMEIAAGGAHT 253
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
VAL DG++ WG+ RD G +G +++P+ L G V+IA+ A+H L + G
Sbjct: 254 VALRSDGSIMVWGTNRD--GQLGDGTTTGRRSPVLLGG-GGFVQIAAAANHTAALKADGT 310
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS 252
L T G E GQLG T S S R G F +V + +H+ I++ GS
Sbjct: 311 LWTCGANESGQLGDGTFASRSWLTRVGSGFA---QVAVGSRHM---------AAIAADGS 358
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
A+G +++ Q G+ ++ + + F +A+G HSL + ++G +
Sbjct: 359 RWAWGNDDFGQAGDGS-----------WSRSAVPAQVGSGFARVAAGLGHSLGVKADGTL 407
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+A+G +D G++G + P I + +A G S A+ ++G L+ WG +
Sbjct: 408 WAWGLNDMGQVGDGTDAPQRGAPVRI----GEAFAQVAAGYQHSLAVAADGTLWSWGSNS 463
Query: 373 GYQLGNGKEDD-----------ILNSEGKIYAFGRHDYGRLGLK--NVSEPVTEPTPIPS 419
QLG+ + + G+ ++ G G L + +V PT + S
Sbjct: 464 SGQLGDPSVASRHTPAQIGSGFVRVAAGRWHSAGVKADGTLWIWGGDVGGTYDTPTQVGS 523
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
+A G+ + A+ +G L+ WG QL +G D + P+++
Sbjct: 524 ----GFLEVAAGHEHTVALAEDGTLWTWGNNGLGQLCDGTFDQRIAPVQV------GTGF 573
Query: 480 LQVASGGQHSVIL 492
+ VA+G H+V L
Sbjct: 574 VHVAAGAYHTVAL 586
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 209/540 (38%), Gaps = 142/540 (26%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G D GQ+G G V +R T V +T+ + DG ++ WG N
Sbjct: 61 GTLWAWGINDAGQIGDGTRV-DRATPVRVGAGFARAAAGT--GYTLAVKADGTLWAWGDN 117
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH-----------SVALLEDGTVYAWG 145
G L GD P+ VQI AG + S+A+ DGT++AWG
Sbjct: 118 ASGQL-----GDGTTTPR-----AAPVQIGAGFAEVAASRNWLEPVSLAVKTDGTLWAWG 167
Query: 146 SFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
S R GL G+G Q P+++ +G ++A G H + + G+ T G G
Sbjct: 168 SNR-----QGLVGDGSGLDQHAPVQIG--TGFTRVAVGDWHAAAVKADGSAWTWGSNASG 220
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG T S R P +V L + ++ G + + S GSI+ +G N
Sbjct: 221 QLGDGTIASTPRP--------TPAQV-LPAEVMEIAAGGAHTVALRSDGSIMVWGTNRDG 271
Query: 263 QLGEADSEVQKS---------------------------------------GNTCFFTPH 283
QLG+ + ++S G+ F +
Sbjct: 272 QLGDGTTTGRRSPVLLGGGGFVQIAAAANHTAALKADGTLWTCGANESGQLGDGTFASRS 331
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+ + F +A G H A+ ++G +A+G D+G+ G + S + +P+
Sbjct: 332 WLTRVG-SGFAQVAVGSRHMAAIAADGSRWAWGNDDFGQAGDGSWSR-----SAVPAQVG 385
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
+A G S + ++G L+ WG+ + Q+G+G +
Sbjct: 386 SGFARVAAGLGHSLGVKADGTLWAWGLNDMGQVGDGTDAPQRGAPVRIGEAFAQVAAGYQ 445
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ ++G ++++G + G+LG +P P+ +A G S + +
Sbjct: 446 HSLAVAADGTLWSWGSNSSGQLG-----DPSVASRHTPAQIGSGFVRVAAGRWHSAGVKA 500
Query: 441 EGVLYGWG--MGNGY----QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+G L+ WG +G Y Q+G+G L+VA+G +H+V LA+
Sbjct: 501 DGTLWIWGGDVGGTYDTPTQVGSG--------------------FLEVAAGHEHTVALAE 540
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 193/440 (43%), Gaps = 60/440 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDV-MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G T G +GQLG G R T A V + V+E+ GG HTV L DG + WG
Sbjct: 209 GSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAE-VMEIAAGGAHTVALRSDGSIMVWGT 267
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKA-VQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N +G LG +G + V L VQI+A +H+ AL DGT++ G+
Sbjct: 268 NRDGQLG---DGTTTGRRSPVLLGGGGFVQIAAAANHTAALKADGTLWTCGANES----- 319
Query: 155 GLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
G G+G + L V SG ++A G+ H + + G+ G + GQ G + ++
Sbjct: 320 GQLGDGTFASRSWLTRVGSGFAQVAVGSRHMAAIAADGSRWAWGNDDFGQAGDGSWSRSA 379
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
A+ G F V G+ ++ + + G++ A+GLN+ Q+G+ Q
Sbjct: 380 VPAQVGSGFAR-------------VAAGLGHSLGVKADGTLWAWGLNDMGQVGDGTDAPQ 426
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
+ P I + F +A+G HSLA+ ++G ++++G + G+LG +P
Sbjct: 427 RG------APVRIG----EAFAQVAAGYQHSLAVAADGTLWSWGSNSSGQLG-----DPS 471
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG------------MGNGY-QLGNG 379
P+ +A G S + ++G L+ WG +G+G+ ++ G
Sbjct: 472 VASRHTPAQIGSGFVRVAAGRWHSAGVKADGTLWIWGGDVGGTYDTPTQVGSGFLEVAAG 531
Query: 380 KEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
E + L +G ++ +G + G+L + + P +A G + A+
Sbjct: 532 HEHTVALAEDGTLWTWGNNGLGQLCDGTFDQRIA-----PVQVGTGFVHVAAGAYHTVAL 586
Query: 439 DSEGVLYGWGMGNGYQLGNG 458
+++G L+ G QLG+G
Sbjct: 587 EADGTLWACGENGAGQLGDG 606
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 173/426 (40%), Gaps = 77/426 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCLTEDGKVYT 92
G + TCG ++GQLG G TFA L V +V VG H + DG +
Sbjct: 309 GTLWTCGANESGQLGDG-------TFASRSWLTRVGSGFAQVAVGSRHMAAIAADGSRWA 361
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG +D G G + +P V +++AG HS+ + DGT++AWG D
Sbjct: 362 WGNDDFGQAG-DGSWSRSAVPAQVG--SGFARVAAGLGHSLGVKADGTLWAWG-LND--- 414
Query: 153 SMGLKGEGI----QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
MG G+G + P+++ ++A+G H + + + G L + G GQLG +
Sbjct: 415 -MGQVGDGTDAPQRGAPVRIGEA--FAQVAAGYQHSLAVAADGTLWSWGSNSSGQLGDPS 471
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDV------------FTGVYNTFISSKGSIL-- 254
S A+ G F+ V R H V G Y+T L
Sbjct: 472 VASRHTPAQIGSGFVR---VAAGRWHSAGVKADGTLWIWGGDVGGTYDTPTQVGSGFLEV 528
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCF-------FTPHLIKSLSDKKFTMLASGQHHSLALN 307
A G + L E D + GN F + F +A+G +H++AL
Sbjct: 529 AAGHEHTVALAE-DGTLWTWGNNGLGQLCDGTFDQRIAPVQVGTGFVHVAAGAYHTVALE 587
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
++G ++A G + G+LG + T + +++ G + A+ ++G L+
Sbjct: 588 ADGTLWACGENGAGQLG-----DGTTTSSAALLGVGTGFAAVSAGELHTVAVKADGTLWS 642
Query: 368 WGMGNGYQLGNGKEDD----------------------ILNSEGKIYAFGRHDYGRLGLK 405
WG G+ +LG G D ++ ++G ++A G+ +G+LG
Sbjct: 643 WGSGSLGELGGGAFDWRPEPTQIGSGAAQVAAGGAHTLVVKADGTLWAVGQSAFGQLGDG 702
Query: 406 NVSEPV 411
VS V
Sbjct: 703 TVSTLV 708
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 174/439 (39%), Gaps = 98/439 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
++S SH+VA+ +DGT++AWG D+ G +G + TP+++ + + A+G
Sbjct: 45 ARVSTRGSHTVAIAKDGTLWAWG-INDA-GQIGDGTRVDRATPVRVGAGF--ARAAAGTG 100
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
+ + + + G L G GQLG T + + G F EV R ++ V
Sbjct: 101 YTLAVKADGTLWAWGDNASGQLGDGTTTPRAAPVQIGAGFA---EVAASRNWLEPV---- 153
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + + G++ A+G N +G+ Q + P I + FT +A G H
Sbjct: 154 -SLAVKTDGTLWAWGSNRQGLVGDGSGLDQHA-------PVQIGT----GFTRVAVGDWH 201
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+ A+ ++G + +G + G+LG ++ PTP L + + IA G + A+ S+
Sbjct: 202 AAAVKADGSAWTWGSNASGQLGDGTIAS-TPRPTPAQVLPAE-VMEIAAGGAHTVALRSD 259
Query: 363 GVLYGWGMGNGYQLGNGKED-----------------------DILNSEGKIYAFGRHDY 399
G + WG QLG+G L ++G ++ G ++
Sbjct: 260 GSIMVWGTNRDGQLGDGTTTGRRSPVLLGGGGFVQIAAAANHTAALKADGTLWTCGANES 319
Query: 400 GRLG---------LKNVSEPVTE----------------------------------PTP 416
G+LG L V + +
Sbjct: 320 GQLGDGTFASRSWLTRVGSGFAQVAVGSRHMAAIAADGSRWAWGNDDFGQAGDGSWSRSA 379
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-EPMKIEGKQLN 475
+P+ +A G S + ++G L+ WG+ + Q+G+G + P++I
Sbjct: 380 VPAQVGSGFARVAAGLGHSLGVKADGTLWAWGLNDMGQVGDGTDAPQRGAPVRI------ 433
Query: 476 NYTVLQVASGGQHSVILAK 494
QVA+G QHS+ +A
Sbjct: 434 GEAFAQVAAGYQHSLAVAA 452
>gi|393905325|gb|EJD73936.1| CBR-RAN-3 protein [Loa loa]
Length = 554
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 179/384 (46%), Gaps = 45/384 (11%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFAL--VEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G VL+CG+G+ QLG RK A+ + + +V+V+ GG+H++ L EDG VY
Sbjct: 142 GDRVLSCGEGE--QLGHPGRSTTRKPRAISTLPEEKLIVQVIAGGVHSLVLMEDGTVYGC 199
Query: 94 GCNDEGAL---GREAEGDSE------FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
G N++G + G E E S+ F + K V ++AG S S AL E G+V AW
Sbjct: 200 GINEKGTVPGEGIEPEESSDKLTPIKFSDSLIQRHGKVVMLAAGASFSAALTEKGSVIAW 259
Query: 145 GSFR------DSHGSMGLKGEGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTA 196
G+ R +SH ++ ++K P+ + IVKIA+G +H VMLT G +LT
Sbjct: 260 GNLRGMSGCIESHETL----LEMEKQPVVIVQHQQKVIVKIAAGENHLVMLTENGEVLTF 315
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL------KRKHI--DDVFTGVYNTFIS 248
G GQLGR ++ S R+ R M P + + K+K + D++ G + T
Sbjct: 316 GDGSVGQLGRCSRVSHIRSQR--MVNDSPDSLRISVYDKGKKKLVLFDNIMAGGFWTAAR 373
Query: 249 S-KGSILAFGLNNYSQLG----EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
S G++ GLNN+ QLG EA + P + L SG H
Sbjct: 374 SIDGTVYVCGLNNFGQLGVPTPEAPEDEGSQPELKIMHPVKASAFGSTAVVEL-SGIQHI 432
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD----KTITSIACGNCVSFAI 359
+ALN++G++Y G++ LGL + + LQ + + I+ S
Sbjct: 433 VALNAQGEVYGIGKNTDNALGLGTWNGKEDDHWKYSELQKIDIPEQVKGISASLGCSIVW 492
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
G Y WG + QLG G +DD
Sbjct: 493 TDNGNAYSWGYDSSGQLGLGIKDD 516
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 167/419 (39%), Gaps = 85/419 (20%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-------TPLK----- 167
K VQ+ AG HS+ L+EDGTVY G + G+ + GEGI+ TP+K
Sbjct: 175 KLIVQVIAGGVHSLVLMEDGTVYGCGI--NEKGT--VPGEGIEPEESSDKLTPIKFSDSL 230
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
++ +V +A+GA LT +G+++ G R S + LE +
Sbjct: 231 IQRHGKVVMLAAGASFSAALTEKGSVIAWG----------NLRGMSGCIESHETLLEMEK 280
Query: 228 VPL-----KRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQ-KSGNTCFF 280
P+ ++K I + G + ++ G +L FG + QLG +S
Sbjct: 281 QPVVIVQHQQKVIVKIAAGENHLVMLTENGEVLTFGDGSVGQLGRCSRVSHIRSQRMVND 340
Query: 281 TPHLIK-SLSDKK------FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-- 331
+P ++ S+ DK F + +G + A + +G +Y G +++G+LG+ P
Sbjct: 341 SPDSLRISVYDKGKKKLVLFDNIMAGGFWTAARSIDGTVYVCGLNNFGQLGVPTPEAPED 400
Query: 332 --------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NG 379
+ P + + ++ + A++++G +YG G LG NG
Sbjct: 401 EGSQPELKIMHPVKASAFGSTAVVELSGIQHI-VALNAQGEVYGIGKNTDNALGLGTWNG 459
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
KEDD Y L + IP S+ C S
Sbjct: 460 KEDD------------HWKYSEL----------QKIDIPEQVKGISASLGC----SIVWT 493
Query: 440 SEGVLYGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G Y WG + QLG G +DD + P KI L+ Y ++ + H++ LAK
Sbjct: 494 DNGNAYSWGYDSSGQLGLGIKDDEEKMVSRPRKITSAHLDGYRIVGASLADNHALFLAK 552
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 83/209 (39%), Gaps = 42/209 (20%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV----------------G 77
T G VLT G G GQLG V ++ +V D + + + V G
Sbjct: 307 TENGEVLTFGDGSVGQLGRCSRVSHIRSQRMVNDSPDSLRISVYDKGKKKLVLFDNIMAG 366
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQ-TVNLPKKA--------VQI 125
G T + DG VY G N+ G LG EA D P+ + P KA V++
Sbjct: 367 GFWTAARSIDGTVYVCGLNNFGQLGVPTPEAPEDEGSQPELKIMHPVKASAFGSTAVVEL 426
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMG---------LKGEGIQKTPLKLESVSGIVK 176
S G H VAL G VY G D+ +G K +QK + E V G
Sbjct: 427 S-GIQHIVALNAQGEVYGIGKNTDNALGLGTWNGKEDDHWKYSELQKIDIP-EQVKG--- 481
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLG 205
I++ ++ T GN + G GQLG
Sbjct: 482 ISASLGCSIVWTDNGNAYSWGYDSSGQLG 510
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 161/355 (45%), Gaps = 49/355 (13%)
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
E G+ ++ G+ H V + S G + + G E GQLG + L P +
Sbjct: 10 EEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGH----------GQADECLAPKAI 59
Query: 229 P-LKRKHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
L I+ V G T S+G + ++G ++ +LG D F P I
Sbjct: 60 STLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCND-------VFVPRPI 112
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
+ S + +A G H+L + EG+++ FGR+ G+LGL + ++ ++ P + +LQ +
Sbjct: 113 EFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLS-PQLVVALQGER 171
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ S+ACG+ S A G ++ WG G LG+G+ D
Sbjct: 172 VRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGW 231
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+++ +G+++ FG YG+LG + ++ T P + +L+ I+S+A G + A D
Sbjct: 232 RHSAVVSEDGRVFTFGWSKYGQLGHGDHTDR-TVPCQVAALRHTRISSVAGGWRHTMAAD 290
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
S G LYGWG QLG G D P+ + G L V V G +H+V + +
Sbjct: 291 SSGNLYGWGWNKFGQLGLGDSSDRPSPVLV-GGALAGQRVSLVTCGWRHTVAVTE 344
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 180/373 (48%), Gaps = 38/373 (10%)
Query: 23 TSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGP--DVMERKTFALVEDLDNVVEVVVGGMH 80
+S +V L C G+V + G+G+ GQLG G + + K + + D + VV G +
Sbjct: 22 SSHSVAILSC----GIVTSWGRGEDGQLGHGQADECLAPKAISTLTDA-GIESVVCGAEY 76
Query: 81 TVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLE 137
T+ + G+VY+WG D G LG + + F+P+ + + +++ GD+H++ +
Sbjct: 77 TIAVAPSRGQVYSWGWGDFGRLG-HGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAG 135
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLT 195
+G ++ +G R+ +G +GL +P + ++ G + +A G++H + T G + +
Sbjct: 136 EGELFTFG--RNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFS 193
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSIL 254
G G LG + +L V L+ + G ++ +S G +
Sbjct: 194 WGWGRYGNLG---------DGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVF 244
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG + Y QLG D +T P + +L + + +A G H++A +S G +Y
Sbjct: 245 TFGWSKYGQLGHGD-------HTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYG 297
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPI---PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+G + +G+LGL + S+ P+P+ +L + ++ + CG + A+ G +Y WG G
Sbjct: 298 WGWNKFGQLGLGDSSD---RPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRG 354
Query: 372 NGYQLGNGKEDDI 384
QLG+G E D+
Sbjct: 355 VNGQLGHGAEQDL 367
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 181/420 (43%), Gaps = 66/420 (15%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
ME E+ V V G H+V + G V +WG ++G LG + D P+ +
Sbjct: 1 METAEARSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLG-HGQADECLAPKAI 59
Query: 117 NLPKKA--VQISAGDSHSVALL-EDGTVYAWGSFRDSHGSMGLKGEG-----IQKTPLKL 168
+ A + G +++A+ G VY+WG G G G G P++
Sbjct: 60 STLTDAGIESVVCGAEYTIAVAPSRGQVYSWG-----WGDFGRLGHGDCNDVFVPRPIEF 114
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG-E 227
S + ++A G H +++ G L T G + GQLG L P
Sbjct: 115 FSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDC----------LSPQLV 164
Query: 228 VPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
V L+ + + V G ++ +++ G++ ++G Y LG+ +S+ + + P +
Sbjct: 165 VALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDR-------YLPTRVV 217
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
L + G HS ++ +G+++ FG YG+LG + ++ T P + +L+ I
Sbjct: 218 GLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDR-TVPCQVAALRHTRI 276
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKN 406
+S+A G + A DS G LYGWG + +G+LGL +
Sbjct: 277 SSVAGGWRHTMAADSSGNLYGWGW--------------------------NKFGQLGLGD 310
Query: 407 VSEPVTEPTPI---PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
S+ P+P+ +L + ++ + CG + A+ G +Y WG G QLG+G E D+
Sbjct: 311 SSD---RPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
S ++ +T+++CG+ S AI S G++ WG G QLG+G+ D+ L P I L +
Sbjct: 9 SEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAI--STLTDAG 66
Query: 479 VLQVASGGQHSVILAKPK 496
+ V G ++++ +A +
Sbjct: 67 IESVVCGAEYTIAVAPSR 84
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 53/357 (14%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESV----SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS HG +GL G + +E S + ++ G +H VMLT G + +
Sbjct: 1 MYCWGS--TVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G + QLG QR+ G+ F ++ H T +N + G + +
Sbjct: 59 GNNDLDQLGHKKQRTKPEKVE-GLDFYRITKISCGGNH-----TLAFNEW----GQLFGW 108
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G +++ QLG T P +IKSL+ ++ G++HSLAL + G++Y++G
Sbjct: 109 GSDSHGQLG--------FNGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWG 160
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ G+LGL SE +PT I SL I IACG+ SFA+ G +YGW
Sbjct: 161 GNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGW-------- 212
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G++ YG+LGL N E PT + +L+ + IACG S
Sbjct: 213 ------------------GKNTYGQLGL-NDEENKLHPTQLKTLRSIRVKYIACGEDFSA 253
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ ++G ++ G G QLG+G + + P KI +L TV QV+ G +H++ L
Sbjct: 254 FLSADGGVFTCGAGMYGQLGHGSTSNEILPRKI--MELMGSTVTQVSCGKRHTLALV 308
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 153/339 (45%), Gaps = 53/339 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG D QLG +R VE LD + ++ GG HT+ E G+++
Sbjct: 50 TKSGEVFSCGNNDLDQLG---HKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLF 106
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG + G LG G ++ +P+ + VQIS G +HS+AL +G +Y+WG D
Sbjct: 107 GWGSDSHGQLG--FNGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYD 164
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-- 205
+G++ E +K P ++S+ G I IA G++H L+ G + G GQLG
Sbjct: 165 GQLGLGMRSE-YEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLN 223
Query: 206 ------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
TQ R+ R + ++ GE ++ F+S+ G + G
Sbjct: 224 DEENKLHPTQLKTLRSIR--VKYIACGE--------------DFSAFLSADGGVFTCGAG 267
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRH 318
Y QLG + + P I L T ++ G+ H+LAL S G++Y+FG
Sbjct: 268 MYGQLGHGSTSNE-------ILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLG 320
Query: 319 DYGRLGLK---NVSE------PVTEPTPIPSLQDKTITS 348
G+LG + N S P P+ +P + DK TS
Sbjct: 321 GGGQLGTRVKTNCSTPQVVLGPWVSPSGVPVITDKKKTS 359
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 168/376 (44%), Gaps = 59/376 (15%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE--AEGDSEFIPQTVNLPKKAVQISA 127
+V + G HT+ L +DGKV++ G N+ G LGR EG P ++ VQI+A
Sbjct: 69 SVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAA 128
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFV 185
G +H++A+ +DG ++AWGS +SHG + L I T P ++ S++ V++A G DH +
Sbjct: 129 GRAHNMAVADDGRLFAWGS--NSHGQLALPS-NITSTDIPKRVVSLTETVQVACGTDHTI 185
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
+ G + G G++ A + + F V D Y
Sbjct: 186 AIVESGRIFVWGLQPDGRV---------LYAPKEIEFFMALPVVQVNAGSD------YYV 230
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G++ +G N Y QLG +D++ + TP + +L +A G H++A
Sbjct: 231 ALTVSGAMFVWGSNEYGQLGTSDNKERT-------TPAEVTTLHSLNVVHVACGHSHTVA 283
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L EG+++ G G+LG + + +T +ACG C + A+
Sbjct: 284 LTHEGRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLAL------ 337
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ GK+YAFG + G+LG NV VT P PI +L D +
Sbjct: 338 ---------------------AGGKMYAFGLNSSGQLGSGNVRSQVT-PRPIDALTD--V 373
Query: 426 TSIACGNCVSFAIDSE 441
S+ G SF I S+
Sbjct: 374 VSVFAGWDQSFCIQSK 389
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 41/335 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL----DNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG + G+LG G + +F + L N+V++ G H + + +DG+++
Sbjct: 87 GKVWSCGSNENGELGRGG--CQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFA 144
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N G L + S IP+ V + VQ++ G H++A++E G ++ W
Sbjct: 145 WGSNSHGQLALPSNITSTDIPKRVVSLTETVQVACGTDHTIAIVESGRIFVW-------- 196
Query: 153 SMGLKGEG-IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
GL+ +G + P ++E +V++ +G+D++V LT G + G E GQLG
Sbjct: 197 --GLQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLG---- 250
Query: 210 RSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
S N R P EV L ++ V G +T ++ +G + G ++ QLG
Sbjct: 251 --TSDNKERTT----PAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLGSG 304
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
S NT ++ + T +A G+ H+LAL + GK+YAFG + G+LG N
Sbjct: 305 RK--VPSQNTMLAVTEMLGT----HVTRVACGRCHTLAL-AGGKMYAFGLNSSGQLGSGN 357
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
V VT P PI +L D + S+ G SF I S+
Sbjct: 358 VRSQVT-PRPIDALTD--VVSVFAGWDQSFCIQSK 389
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A+G+ H++A+ +G+++A+G + +G+L L + P + SL + +ACG
Sbjct: 126 IAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETV--QVACGTDH 183
Query: 356 SFAIDSEGVLYGWGMG-NGYQLGNGKEDDI------------------LNSEGKIYAFGR 396
+ AI G ++ WG+ +G L KE + L G ++ +G
Sbjct: 184 TIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGS 243
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
++YG+LG + E T P + +L + +ACG+ + A+ EG L+ G + QLG
Sbjct: 244 NEYGQLGTSDNKERTT-PAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLG 302
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+G++ M + L + V +VA G H++ LA
Sbjct: 303 SGRKVPSQNTMLAVTEMLGTH-VTRVACGRCHTLALA 338
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 86/222 (38%), Gaps = 35/222 (15%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A+G+ H+L L +GK+++ G ++ G LG E P+ I IA G
Sbjct: 73 IATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAH 132
Query: 356 SFAIDSEGVLYGWGMGNGYQLG---NGKEDDI----------------------LNSEGK 390
+ A+ +G L+ WG + QL N DI + G+
Sbjct: 133 NMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETVQVACGTDHTIAIVESGR 192
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
I+ +G GR+ + P I + + G+ A+ G ++ WG
Sbjct: 193 IFVWGLQPDGRV--------LYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSN 244
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG + P ++ L++ V+ VA G H+V L
Sbjct: 245 EYGQLGTSDNKERTTPAEV--TTLHSLNVVHVACGHSHTVAL 284
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFA 63
K+ P++ + S V + C V LT CG GQLG G V + T
Sbjct: 255 KERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLGSGRKVPSQNTML 314
Query: 64 LVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
V ++ +V V G HT+ L GK+Y +G N G LG S+ P+ ++
Sbjct: 315 AVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNSSGQLG-SGNVRSQVTPRPIDALTD 372
Query: 122 AVQISAGDSHSVAL-------LEDGTVYA 143
V + AG S + L T YA
Sbjct: 373 VVSVFAGWDQSFCIQSKNEEELSSATSYA 401
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 170/361 (47%), Gaps = 33/361 (9%)
Query: 43 GQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGAL 101
G GD G+LGLG + R D ++V + GG HT+ LTE G VY G ND G L
Sbjct: 39 GNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQL 98
Query: 102 GREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL--KG 158
G + + P V+ LPKK + I+AG HS A+ DG +Y WG ++S+G +GL K
Sbjct: 99 GVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWG--KNSNGQLGLGKKA 156
Query: 159 EGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P K+E ++GI +A G++H V T +G L+ G G+LG + S
Sbjct: 157 ANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFF 216
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R + L+ + +V G +++ I GS+ FG + G +++ +
Sbjct: 217 RTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATA- 275
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P +I L K +A G +H+ ++S G+++ +G ++ G LG+ E + P
Sbjct: 276 ------PSMISELPYSK--QVACGGYHTCVISSSGELFTWGSNENGCLGM-GFMETIHFP 326
Query: 336 TPIPS-LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY------------QLGNGKED 382
I ++ ++CG + AI SEG ++ WG G Y QLG G +
Sbjct: 327 ERIEGPFSKNPVSQVSCGWKHTAAI-SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDV 385
Query: 383 D 383
D
Sbjct: 386 D 386
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 47/290 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + F++ G + A GLN++ QLG + V K+ + T L S KK +A+G
Sbjct: 75 GAHTLFLTESGCVYAAGLNDFGQLGVS---VDKN----YTTEPLEVSALPKKIIHIAAGY 127
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+HS A+ ++G++Y +G++ G+LGL K + V+ P+ + L +I +A G+ S A
Sbjct: 128 YHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAA 187
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDIL---------------------------------- 385
+G WG G +LG+G E +L
Sbjct: 188 TDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSAC 247
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ G ++ FG + G + ++ T P+ I L +ACG + I S G L
Sbjct: 248 IDENGSVFIFGERAMDKFGFRE-AKNATAPSMISELPYS--KQVACGGYHTCVISSSGEL 304
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ WG LG G + I P +IEG N V QV+ G +H+ +++
Sbjct: 305 FTWGSNENGCLGMGFMETIHFPERIEGPFSKN-PVSQVSCGWKHTAAISE 353
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 175/421 (41%), Gaps = 71/421 (16%)
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D G LG + +S++ P + V I+ G +H++ L E G VYA G +
Sbjct: 38 WGNGDFGRLGLGSL-ESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAG--LND 94
Query: 151 HGSMGLKGEGIQKT-PLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +G+ + T PL++ ++ I+ IA+G H +T+ G L G GQLG
Sbjct: 95 FGQLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLG--- 151
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV------YNTFISSKGSILAFGLNNYS 262
+ A +S VP K + ++ + + ++ + +G L++G
Sbjct: 152 ---LGKKAANAVS------VPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSG 202
Query: 263 QLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+LG S + + + P LI+ L K +A+G HS ++ G ++ FG
Sbjct: 203 RLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAM 262
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+ G + ++ T P+ I L +ACG + I S G L+ WG LG G
Sbjct: 263 DKFGFRE-AKNATAPSMISELPYSK--QVACGGYHTCVISSSGELFTWGSNENGCLGMGF 319
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ I + E + P ++ ++CG + AI S
Sbjct: 320 METI---------------------HFPERIEGP-----FSKNPVSQVSCGWKHTAAI-S 352
Query: 441 EGVLYGWGMGNGY------------QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
EG ++ WG G Y QLG G + D ++P +E ++ + LQV+ G H
Sbjct: 353 EGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEE--SVRALQVSCGFNH 410
Query: 489 S 489
+
Sbjct: 411 T 411
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 23/237 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLD--NVVEVVVGGMHTVCLTEDGKV 90
T G + G+ GQLGLG + + VE L+ ++ V +G H+V T+ G+
Sbjct: 134 TADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEA 193
Query: 91 YTWGCNDEGALGREAEG--------DSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGT 140
+WG G LG E SE+ P+ + + K ++AG HS + E+G+
Sbjct: 194 LSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGS 253
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
V+ +G + G + P + + ++A G H +++S G L T G E
Sbjct: 254 VFIFG--ERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFTWGSNE 311
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
G LG + + F E E P + + V G +T S+G++ +G
Sbjct: 312 NGCLGMGFMET--------IHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFTWG 360
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G D+GRLGL ++ E P + ++ +IACG + + G +Y G+ +
Sbjct: 38 WGNGDFGRLGLGSL-ESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFG 96
Query: 454 QLGNGKEDD-ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG + + EP+++ ++ +A+G HS +
Sbjct: 97 QLGVSVDKNYTTEPLEVSALPKK---IIHIAAGYYHSAAI 133
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 169/353 (47%), Gaps = 39/353 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + V +V G HT L EDG VYT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHG-KRVRDVGCGRRHTAFLLEDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKK-AVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CND G LG E Q V L + V +S G+SH++AL + G V++WG S G
Sbjct: 60 CNDLGQLGHEKSRKKP--EQVVALDAQIIVALSCGESHTLALNDKGQVFSWG--LGSDGQ 115
Query: 154 MGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQ 209
+GL E + P ++S+S + ++A G H + L+ G++ + G GQLG +T
Sbjct: 116 LGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTG 175
Query: 210 RSAS----RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
+S S + +G+ F + G ++ ++ G++ +G N + QLG
Sbjct: 176 QSISVPQHLQSLQGIPFAQIAA------------GGAHSFALTLSGAVFGWGRNKFGQLG 223
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D + + CF P L+K+L ++ ++ G+ H+ AL EG ++ FG YG+LG
Sbjct: 224 LND-----TNDRCF--PALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID-SEGVLYGWGMGNGYQLG 377
+ + V P + L +T IACG + A S G + +G+G QLG
Sbjct: 277 NSTNHEVN-PRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 161/355 (45%), Gaps = 53/355 (14%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTA 196
+ WG+ S+G +GL G E I P K E G + + G H L G + T
Sbjct: 1 MLCWGN--ASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
GC + GQLG R V L + I + G +T ++ KG + +
Sbjct: 59 GCNDLGQLGHEKSRKKPEQV-----------VALDAQIIVALSCGESHTLALNDKGQVFS 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GL + QLG + E C P IKSLSD + +A G HSLAL+ G I+++
Sbjct: 108 WGLGSDGQLGLNNFE------ECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G++ YG+LGL + ++ P + SLQ IA G SFA+ G ++GW
Sbjct: 162 GQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGW------- 214
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
GR+ +G+LGL + ++ P + +L+ + + I+CG +
Sbjct: 215 -------------------GRNKFGQLGLNDTNDRCF-PALLKALRSQRVIYISCGEDHT 254
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ EG ++ +G G QLG+ + + P K+ +L V Q+A G QH++
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGNVVTQIACGRQHTL 307
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 29/310 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD +V + G HT+ L + G+V++WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG + +P+ + + Q++ G HS+AL + G +++WG R
Sbjct: 110 LGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQL 169
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G+ G+ I P L+S+ GI +IA+G H LT G + G + GQLG
Sbjct: 170 GLGMTGQSI-SVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + + + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDTNDRCFPALLK----ALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-SEGKIYAFGRHDYGRLGLKNV 328
+ P + L T +A G+ H+LA S GK+ +FG G+LG ++
Sbjct: 280 NHE-------VNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRST 332
Query: 329 SEPVTEPTPI 338
P P+
Sbjct: 333 CNR-KSPAPV 341
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV-----VEVVVGGMHTVCLTEDGKV 90
GG + + GQ GQLGLG M ++ ++ + L ++ ++ GG H+ LT G V
Sbjct: 155 GGHIFSWGQNRYGQLGLG---MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAV 211
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+ WG N G LG D F L ++ + IS G+ H+ AL ++G V+ +G+
Sbjct: 212 FGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGA--G 269
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT-SRGNLLTAGCPEQGQLGR 206
+G +G + P K+ + G + +IA G H + T S G + + G GQLG
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG- 328
Query: 207 ITQRSASRNA 216
T+ + +R +
Sbjct: 329 -TRSTCNRKS 337
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G YG+LGL + E V EP K + + CG
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGR----------------- 43
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ L +G +Y G +D G+LG + + +P + +L + I +++C
Sbjct: 44 ---------RHTAFLLEDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQIIVALSC 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG+G+ QLG N E+ I P I K L++ V QVA G HS
Sbjct: 92 GESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNI--KSLSDVQVAQVACGYWHS 149
Query: 490 VILAK 494
+ L+K
Sbjct: 150 LALSK 154
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 182/412 (44%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G +YA G
Sbjct: 2922 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKIYACG 2979
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL IQ P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 2980 EATNGRLGLGLSSGTIQ-IPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + ++GL
Sbjct: 3039 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3089
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P L+K L + +A G +LAL EG ++++G
Sbjct: 3090 YGRLGHGD-------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3142
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3143 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3194
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3195 -------------------DYFRLG-HGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAV 3234
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3235 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3284
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 178/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3895 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3953
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3954 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4011
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4012 GKLGHGNRSPCDRP--RVIESLRGVEV------VDIAAGGAHSACITASGELFTWGKGRY 4063
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+ +L + +A SG +L L + ++++G D
Sbjct: 4064 GRLGHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4116
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4117 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4167
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4168 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4208
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4209 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4263
Query: 497 PN 498
P
Sbjct: 4264 PT 4265
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 40/248 (16%)
Query: 280 FTPHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P LI LS +K LA+ GQH LAL++ G++Y++G D GRLG + + + EP
Sbjct: 433 LAPMLIHGLSSRKIVKLAAHPDGQHF-LALSTSGEVYSWGCGDGGRLGHGDATY-LEEPA 490
Query: 337 PIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------- 384
I + K + IACG+ S A+ ++G LY WG GN +LG+G +D+
Sbjct: 491 LITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTA 550
Query: 385 --------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ G+++++G DYG+LG + S+ P + LQD
Sbjct: 551 LKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLD 609
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I + CG+ S A+ +G +Y WG G+ +LG+G ++ + P ++ L V+ +A
Sbjct: 610 IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDS--LQGKKVVDIAV 667
Query: 485 GGQHSVIL 492
G H + L
Sbjct: 668 GSTHCLAL 675
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G + CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3032
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y+WG
Sbjct: 3033 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL----- 3087
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T L+ + V ++++A G+ + LT G + + G + G+L
Sbjct: 3088 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3147
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3148 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3192
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3193 KGDYFRLGHGTDVHVRK--------PQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3244
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3245 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 172/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3893 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA 3951
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3952 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4011
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V IA+G H +T+ G L T G +G+ GR+
Sbjct: 4012 --GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG---KGRYGRL 4066
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ + ++G +Y +
Sbjct: 4067 GHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4119
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4120 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4172
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4173 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4227
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4228 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 169/413 (40%), Gaps = 64/413 (15%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V G D QLG L ++ +F+ NVV+V G +T +GK+Y G
Sbjct: 2923 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2982
Query: 98 EGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G LG + IP+ + N K V + +G H++AL DG V++WG D G
Sbjct: 2983 NGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD--GK 3040
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR---IT 208
+G P +E++ I IA G+ H +TS G L + G E G+LG T
Sbjct: 3041 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT 3100
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYSQL 264
Q L P V + H + V G + ++ +G + ++G ++ +L
Sbjct: 3101 Q-------------LRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3147
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G SE C P I+ L+ + + G SLAL G ++ +G+ DY RLG
Sbjct: 3148 GRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3200
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
V +P + L+ K I +A G A+ G +Y WG + Q GNG
Sbjct: 3201 -HGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG----- 3254
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ +PT + L+ + IT +ACG+ S A
Sbjct: 3255 ----------------------TTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 59/305 (19%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE-PGEVPL 230
IVK+A+ D HF+ L++ G + + GC + G+LG ++LE P +
Sbjct: 446 IVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGH-----------GDATYLEEPALITT 494
Query: 231 KR-----KHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
K + + G Y+ +++ G + +G NY +LG SE TP L
Sbjct: 495 FSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSED-------VTTPML 547
Query: 285 IKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+ +L +K +A SG +LA+ G+++++G DYG+LG + S+ P + LQ
Sbjct: 548 VTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQ 606
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------ 384
D I + CG+ S A+ +G +Y WG G+ +LG+G ++ +
Sbjct: 607 DLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIA 666
Query: 385 --------LNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVS 435
L EG+++++G +D +L + P +P +P L K I I+CG S
Sbjct: 667 VGSTHCLALTDEGEVHSWGSND--KLQHFDTLFPNKKQPKALPGLNSKHIVGISCGPGQS 724
Query: 436 FAIDS 440
FA S
Sbjct: 725 FAWSS 729
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 140/298 (46%), Gaps = 37/298 (12%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--------KKAVQISAGD 129
G H + L+ G+VY+WGC D G LG GD+ ++ + + K+ VQI+ G
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLG---HGDATYLEEPALITTFSGKQTGKQVVQIACGS 511
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFV 185
++S A+ DG +Y WG R ++G +G TP+ + ++ G +V +A SG +
Sbjct: 512 TYSAAVTADGELYTWG--RGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTL 569
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YN 244
+T G + + G + G+LGR + + +E L+ I V G ++
Sbjct: 570 AVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLVE----KLQDLDIVKVCCGSQFS 620
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ G + +G + +LG E + P L+ SL KK +A G H L
Sbjct: 621 VALTKDGQVYTWGKGDNQRLGHGTDEHVR-------YPKLLDSLQGKKVVDIAVGSTHCL 673
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
AL EG+++++G +D +L + P +P +P L K I I+CG SFA S
Sbjct: 674 ALTDEGEVHSWGSND--KLQHFDTLFPNKKQPKALPGLNSKHIVGISCGPGQSFAWSS 729
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 46/260 (17%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK----FTMLASGQHH 302
+S+ G + ++G + +LG D+ T P LI + S K+ +A G +
Sbjct: 461 LSTSGEVYSWGCGDGGRLGHGDA-------TYLEEPALITTFSGKQTGKQVVQIACGSTY 513
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAID 360
S A+ ++G++Y +GR +YGRLG SE VT P + +L+ + + +ACG + + A+
Sbjct: 514 SAAVTADGELYTWGRGNYGRLG-HGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVT 572
Query: 361 SEGVLYGWGMGNGYQLGNGKED--------------DI------------LNSEGKIYAF 394
G ++ WG G+ +LG G D DI L +G++Y +
Sbjct: 573 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTW 632
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
G+ D RLG E V P + SLQ K + IA G+ A+ EG ++ WG + Q
Sbjct: 633 GKGDNQRLG-HGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691
Query: 455 LGNGKEDDILEPMKIEGKQL 474
D L P K + K L
Sbjct: 692 -----HFDTLFPNKKQPKAL 706
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + VE
Sbjct: 3978 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGVE 4035
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G+++TWG +G GR GDSE P+ V+ + +
Sbjct: 4036 ----VVDIAAGGAHSACITASGELFTWG---KGRYGRLGHGDSEDQLKPKLVDALQGHRV 4088
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ ++ +GD+ ++ L +D V++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4089 IDVACGSGDAQTLCLTDDDMVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4146
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4147 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4196
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4197 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINR 4248
Query: 296 LASGQHHSLALNSE-----GKIYAFGRHDYGRL 323
+A G H+LA ++ GK+ A +Y L
Sbjct: 4249 VACGSAHTLAWSTSKPTNAGKMPAQVPMEYNHL 4281
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 108/248 (43%), Gaps = 38/248 (15%)
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S + + +GLN+ QLG K P ++LS +A G A+
Sbjct: 2918 SIRTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVT 2970
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVL 365
EGKIYA G GRLGL S + P I +L + + +A G + A+ +G +
Sbjct: 2971 VEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3030
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3031 FSWGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRI 3063
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
IACG+ S AI S G LY WG+G +LG+G L P + K L + V+QVA G
Sbjct: 3064 RDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLV--KVLLGHRVIQVACG 3121
Query: 486 GQHSVILA 493
+ + LA
Sbjct: 3122 SRDAQTLA 3129
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G+GD G+LG M L+E L + ++ G H+ +T G++Y
Sbjct: 3025 TVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3083
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAG--DSHSVALLEDGTVYAWGSF 147
+WG + G LG + ++ P+ V L + +Q++ G D+ ++AL ++G V++WG
Sbjct: 3084 SWGLGEYGRLG-HGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD- 3141
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +G G P +E ++ G+ +I GA + LT G + T G + +LG
Sbjct: 3142 -GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3200
Query: 206 RITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
T + +P V L+ K I V G + ++ G + A+G N++ Q
Sbjct: 3201 HGTD----------VHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3250
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + V + P L++ L +K T +A G HS+A +
Sbjct: 3251 QGNGTTTVNRK-------PTLVQGLEGQKITRVACGSSHSVAWTT 3288
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 30/242 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTEDGKV 90
G V + G GD G+LG G D + AL+ VV++ G ++ +T DG++
Sbjct: 465 GEVYSWGCGDGGRLGHG-DATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGEL 523
Query: 91 YTWGCNDEGALGREAEGDSEFI--PQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAW 144
YTWG G GR G SE + P V K K V ++ +GD+ ++A+ E+G V++W
Sbjct: 524 YTWG---RGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSW 580
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G +G +G G KTP +E + IVK+ G+ V LT G + T G +
Sbjct: 581 GD--GDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 638
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
+LG T R L+ L+ K + D+ G + ++ +G + ++G N+
Sbjct: 639 RLGHGTDEHV-----RYPKLLD----SLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDK 689
Query: 262 SQ 263
Q
Sbjct: 690 LQ 691
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G +V LT+
Sbjct: 572 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-----LQDLD-IVKVCCGSQFSVALTK 625
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VYTWG D LG + + +L KK V I+ G +H +AL ++G V++WG
Sbjct: 626 DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685
Query: 146 S 146
S
Sbjct: 686 S 686
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G + T LV L VV+V G T+ +TE+G+
Sbjct: 518 TADGELYTWGRGNYGRLGHGSS-EDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQ 576
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
V++WG D G LGR D P+ V + V++ G SVAL +DG VY WG
Sbjct: 577 VWSWGDGDYGKLGR-GGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG-- 633
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G + + P L+S+ G +V IA G+ H + LT G + + G ++ Q
Sbjct: 634 KGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 85/221 (38%), Gaps = 40/221 (18%)
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
N C P K+LS T + + L L+ G +Y +N
Sbjct: 388 ANVC--GPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYT-----------QNYKSTTLA 434
Query: 335 PTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
P I L + I +A A+ + G +Y WG G+G +LG+G + L I
Sbjct: 435 PMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHG-DATYLEEPALIT 493
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
F G K + IACG+ S A+ ++G LY WG GN
Sbjct: 494 TFSGKQTG----------------------KQVVQIACGSTYSAAVTADGELYTWGRGNY 531
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+LG+G +D+ PM + L V+ VA G + LA
Sbjct: 532 GRLGHGSSEDVTTPMLVTA--LKGQKVVDVACGSGDAQTLA 570
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T GVV T G+GD +LG G DV RK +VE L +V V VG +H + +T+ G+VY
Sbjct: 3183 TKSGVVWTWGKGDYFRLGHGTDVHVRKP-QIVEGLRGKKIVHVAVGALHCLAVTDSGQVY 3241
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVAL----LEDGTVYAWGS 146
WG ND G G + L +K +++ G SHSVA + +V+
Sbjct: 3242 AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPSVHEPVL 3301
Query: 147 FRDSHGSMGLKGEGIQ 162
F+ + S+G G+Q
Sbjct: 3302 FQTARDSLGASYLGVQ 3317
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 185/417 (44%), Gaps = 58/417 (13%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV WG ND+ LG +G +P +V K + I+ G + +DG +YA G
Sbjct: 3242 KVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG- 3299
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQG 202
++G +GL TP ++ +S V K+A SG H + LT G + + G E G
Sbjct: 3300 -EGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3358
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG +R +E L+ K I D+ G ++ I+S G + +GL Y
Sbjct: 3359 KLGH-----GNRLTLEKPKLIE----TLRTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3409
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHD 319
+LG D+ Q P L+ +L+D + +A G +L L EG ++++G D
Sbjct: 3410 GRLGHGDNCTQ-------LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3462
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG + SE + P + L + I CG S A+ G ++ WG G+ Y+LG+G
Sbjct: 3463 FGKLG-RGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3521
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+ + V +PTPI L+ K + +A G A+
Sbjct: 3522 TD---------------------------QHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3554
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G +Y WG + Q G+G +P + G L+ V +VA G HSV + P+
Sbjct: 3555 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLG--LDGIFVNRVACGSSHSVAWSLPQ 3609
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 182/417 (43%), Gaps = 66/417 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
++ WG N G LG +G +P + ++L + +QI+ G+ A+ DG +YA G
Sbjct: 4379 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSL-LRPIQIAGGEQTLYAVTPDGKLYATG- 4435
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQG 202
+ + + TP +ES+ + V + SG H + L+S G + + G E G
Sbjct: 4436 YGAGGRLGIGGTDSV-TTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4494
Query: 203 QLGRITQRSASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
+LG + S R A G+ ID ++ I+S+G +L +G
Sbjct: 4495 KLGHGNRDSYDRPKLIEALSGIGV------------IDIACGSAHSACITSQGHVLTWGK 4542
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFG 316
Y +LG DSE Q P L+++L + +A SG +L + + ++++G
Sbjct: 4543 GRYGRLGHGDSEDQ-------LQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG 4595
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
DYG+LG + S+ P I SL +T + CG+ S A+ G +Y WG G
Sbjct: 4596 DGDYGKLG-RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG----- 4649
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
DY RLG N ++ V P + +LQ K I SIA G+
Sbjct: 4650 ---------------------DYHRLGHGN-TDHVRRPKKVAALQGKKIISIATGSLHCV 4687
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
A G ++ WG + QLG+G I P ++ L +++V G H++ L+
Sbjct: 4688 ACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS--LQGKHIVKVICGSAHTLALS 4742
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 189/429 (44%), Gaps = 44/429 (10%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G + G GQLG G D K E L + + + GG T+ +T DGK+Y
Sbjct: 4375 GASTIFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA 4433
Query: 93 WGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
G G LG DS P V ++ K V +++G H +AL DG V++WG
Sbjct: 4434 TGYGAGGRLGIGGT-DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGE 4492
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G P +E++SGI + IA G+ H +TS+G++LT G +G+ GR
Sbjct: 4493 D--GKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG---KGRYGR 4547
Query: 207 ITQRSASRNARRGMSFLEPG--EVPLKRKHIDDVF-TGVYNTF-ISSKGSILAFGLNNYS 262
+ + L+P E L + ID +G T I+ ++ ++G +Y
Sbjct: 4548 LGHGDSEDQ-------LQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4600
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S+ K P I+SL+ T + G S+AL G +Y +G+ DY R
Sbjct: 4601 KLGRGGSDGCK-------VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHR 4653
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG N ++ V P + +LQ K I SIA G+ A G ++ WG + QLG+G
Sbjct: 4654 LGHGN-TDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVS 4712
Query: 383 DILNSEGKIYAFGRHDYG---------RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
I G+H L +SE V P P P L+ + IA +
Sbjct: 4713 AIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV-RPPPSPPLEYDLVRDIAPEDV 4771
Query: 434 VSFAIDSEG 442
+ ++I G
Sbjct: 4772 LVYSIKETG 4780
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 158/357 (44%), Gaps = 42/357 (11%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
VL G D QLG L ++ T++ V + + G +++DGK+Y G
Sbjct: 3243 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG--- 3299
Query: 98 EGALGREAEGDSEFIPQTVNLP------KKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
EG GR G + +P +P K V + +G H++AL DG V++WG D
Sbjct: 3300 EGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED-- 3357
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--- 206
G +G + P +E++ I IA G+ H +TS G L T G E G+LG
Sbjct: 3358 GKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3417
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYS 262
TQ L+P V H + V G + ++ +G + ++G ++
Sbjct: 3418 CTQ-------------LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFG 3464
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG SE C PH ++ L+ + G SLAL G+++ +G+ DY R
Sbjct: 3465 KLGRGGSE------GCSI-PHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3517
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LG + V +PTPI L+ K + +A G A+ G +Y WG + Q G+G
Sbjct: 3518 LG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3573
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 38/336 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG + ++ L + + V V GG H + LT DGKV++W
Sbjct: 3293 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3352
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G ++G LG E L K ++ I+ G SHS A+ G +Y WG G
Sbjct: 3353 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGL-----G 3407
Query: 153 SMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLG 205
G G G T LK + V+ +V++A G+ + LT G + + G + G+LG
Sbjct: 3408 EYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3467
Query: 206 RITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
R G S P +V L + + G ++ ++ G + +G +Y +
Sbjct: 3468 --------RGGSEGCSI--PHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3517
Query: 264 LGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
LG D V+K P I+ L KK +A G H LA+ G++YA+G +D+G+
Sbjct: 3518 LGHGTDQHVRK--------PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3569
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G N +P+ + L + +ACG+ S A
Sbjct: 3570 QGSGNTIVN-KKPSLVLGLDGIFVNRVACGSSHSVA 3604
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+++ G + ++G +LG D+ + P I +L++++ T + G +S A+
Sbjct: 645 LTATGDVFSWGNGEGGRLGHGDTSSKD-------IPTRIVALAERQVTGVFCGSSYSAAI 697
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA--CGNCVSFAIDSEGV 364
+ G++Y +GR YGRLG N SE PT + L+ + + +A CG+ S + G+
Sbjct: 698 TAAGELYTWGRGTYGRLGHGN-SEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756
Query: 365 LYGWGMGNGYQLGNGKEDDI---------LNSEGKIYAF-GRHDYGRLG----------- 403
+Y WG G+ +LGNG + S+G + F G H LG
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816
Query: 404 -----LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN- 457
SE P I +L+ K I +A G A+ + G LYGWG + QL
Sbjct: 817 HGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP 876
Query: 458 --GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
++ +L P+ L + +A+GG S++
Sbjct: 877 CVTRDPIVLLPILTTPPTLR---IAGMAAGGAQSIV 909
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 41/248 (16%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+SSK +L +GLN+ QLG K P LS K +A G +
Sbjct: 3239 LSSK--VLVWGLNDKEQLGGLKGSKVK-------LPTYSSVLSQLKPIHIAGGSKSLFIV 3289
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGV 364
+ +GK+YA G GRLGL + + V P +P L + +A G + A+ +G
Sbjct: 3290 SQDGKLYACGEGTNGRLGLGH-NNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGK 3348
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
++ WG G +LG+G RL L+ +P I +L+ K
Sbjct: 3349 VFSWGEGEDGKLGHGN--------------------RLTLE-------KPKLIETLRTKR 3381
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I IACG+ S AI S G LY WG+G +LG+G L+P + L ++ V+QVA
Sbjct: 3382 IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LADHRVVQVAC 3439
Query: 485 GGQHSVIL 492
G + + L
Sbjct: 3440 GSRDAQTL 3447
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGG--MHTVCLTED 87
C T G VLT G+G G+LG G D ++ LVE L +++ G T+C+T+D
Sbjct: 4530 CITSQGHVLTWGKGRYGRLGHG-DSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDD 4588
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + +L V ++ G SVAL G+VY WG
Sbjct: 4589 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWG- 4647
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ + +G + P K+ ++ G I+ IA+G+ H V + G + T G ++GQL
Sbjct: 4648 -KGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQL 4706
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
G T SA + R S L+ KHI V G +T
Sbjct: 4707 GDGTV-SAIQRPRLVQS--------LQGKHIVKVICGSAHTL 4739
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 282 PHLIKSLSDKKFTMLASGQ--HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P I+ L LA+ H LAL + G ++++G + GRLG + S PT I
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI-PTRIV 677
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------- 383
+L ++ +T + CG+ S AI + G LY WG G +LG+G +D
Sbjct: 678 ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI 737
Query: 384 ------------ILNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSI 428
+ G +YA+G D+G+LG S PV +P D + +
Sbjct: 738 HVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVA--IELPQCSDGAV-KV 794
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
G+ S A+ +G +Y WG G+G +LG+G + P I+ L ++ +A G H
Sbjct: 795 FSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQA--LEGKNIVDLAVGLAH 852
Query: 489 SVIL 492
+ L
Sbjct: 853 CLAL 856
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVG--GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF 111
PD K +E + N+V++ G H + LT G V++WG + G LG +
Sbjct: 614 PDTTAPKPIEGLESV-NIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI 672
Query: 112 IPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP----- 165
+ V L ++ V + G S+S A+ G +Y WG R ++G +G + P
Sbjct: 673 PTRIVALAERQVTGVFCGSSYSAAITAAGELYTWG--RGTYGRLGHGNSEDKHLPTIVQV 730
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
LK + V V + G H + +T G + G + G+LG T G S
Sbjct: 731 LKQQRVIH-VALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCN--------GSSVPVA 781
Query: 226 GEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
E+P VF+G ++ + G++ ++G + +LG SE S P
Sbjct: 782 IELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTAS-------PKA 834
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
I++L K LA G H LAL + G++Y +GR+D+ +L
Sbjct: 835 IQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 2 THLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG-------P 54
T L K++ A++ +V S TL C T G+V + G GD G+LG G P
Sbjct: 3419 TQLKPKLVTALADHRVVQVACGSRDAQTL-CLTEEGLVFSWGDGDFGKLGRGGSEGCSIP 3477
Query: 55 DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQ 114
+ER V+++ G ++ LT+ G+V+TWG D LG G + + +
Sbjct: 3478 HQVERLNGV------GVMQIECGAQFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRK 3528
Query: 115 TVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
+ KK + ++ G H +A+ + G VYAWG + HG G + K P +
Sbjct: 3529 PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGD--NDHGQQGSGNTIVNKKPSLVLG 3586
Query: 171 VSGIV--KIASGADHFV 185
+ GI ++A G+ H V
Sbjct: 3587 LDGIFVNRVACGSSHSV 3603
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVV--GGMHTVCLTEDGKV 90
T G + T G+G G+LG G + T V V+ V + G H++C+T+ G V
Sbjct: 698 TAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIV 757
Query: 91 YTWGCNDEGALGR-EAEGDSEFIPQTVNLPK---KAVQISAGDSHSVALLEDGTVYAWGS 146
Y WG D G LG G S +P + LP+ AV++ +G SVAL DGTVY+WG
Sbjct: 758 YAWGDGDFGKLGNGTCNGSS--VPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGK 815
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G +P ++++ G IV +A G H + LT+ G L G + QL
Sbjct: 816 GHGGRLGHGHSEH--TASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF---RDSHGSMGLKGEGIQKTPLKLES 170
++VN+ + A H +AL G V++WG+ R HG K + L
Sbjct: 626 ESVNIVQLAAHCEG--RHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQ 683
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP- 229
V+G+ G+ + +T+ G L T G +G GR+ G E +P
Sbjct: 684 VTGVF---CGSSYSAAITAAGELYTWG---RGTYGRL-----------GHGNSEDKHLPT 726
Query: 230 ----LKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
LK++ + V G ++ ++ G + A+G ++ +LG +G++
Sbjct: 727 IVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTC----NGSSVPVAI 782
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
L + SD + SG H S+AL +G +Y++G+ +G SE P I +L+
Sbjct: 783 ELPQC-SDGAVKVF-SGSHFSVALGRDGTVYSWGK-GHGGRLGHGHSEHTASPKAIQALE 839
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
K I +A G A+ + G LYGWG + QL
Sbjct: 840 GKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V T G+GD +LG G D + R ++ + G +H V ++ G+V+T
Sbjct: 4638 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFT 4697
Query: 93 WGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSVAL 135
WG NDEG LG +G I P+ V K V++ G +H++AL
Sbjct: 4698 WGDNDEGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4741
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
C T G+V G GD G+LG G P +E L + D V+V G +V L
Sbjct: 750 CVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIE-----LPQCSDGAVKVFSGSHFSVAL 804
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVY 142
DG VY+WG G + P+ + K V ++ G +H +AL G +Y
Sbjct: 805 GRDGTVYSWG-KGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELY 863
Query: 143 AWG 145
WG
Sbjct: 864 GWG 866
>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
Length = 392
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 169/361 (46%), Gaps = 39/361 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
T K G V+ G G LG + + V+DL +V+ V G HTV L +DG
Sbjct: 43 TFMVKKDGSVIYGTGSDANGVLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDG 102
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V+TWG + G LG E +E P V Q+ AG++ ++AL EDGTV+A+G R
Sbjct: 103 TVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNR 162
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G G+G +T +K VSG IV I +G + + L+ G + G GQLG
Sbjct: 163 S-----GQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLG 217
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
T+ A L+P +V + + + TG + ++S G + +G N +L
Sbjct: 218 NGTREKA----------LQPVQVS-ELTDVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKL 265
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ ++ + S P LI + D + SG+ H+LAL +G ++A+G + +G+LG
Sbjct: 266 GDGTNKSRNS-------PVLIDGIYD--VIAVDSGKQHTLALKEDGTVWAWGTNTHGQLG 316
Query: 325 LKNVSEPVTEP-TPIPSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
PV TP + T I +I G S AI +G ++ WG + +LG
Sbjct: 317 Y---GTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGL 373
Query: 379 G 379
G
Sbjct: 374 G 374
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 171/377 (45%), Gaps = 57/377 (15%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSGIVKIASGADH 183
+SA ++ + + +DG+V +G+ D++G +G +G +P+ ++ +S ++ + +G H
Sbjct: 36 LSADNNRTFMVKKDGSVI-YGTGSDANGVLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSH 94
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
V L G + T G G+LG +S + + +L +K+ + FT
Sbjct: 95 TVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHH-VKWLSD----VKQVRAGENFT--- 146
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ G++ AFG N QLG+ +E + P + L+D + +G+ S
Sbjct: 147 -LALKEDGTVWAFGKNRSGQLGDGTTETR-------VKPVQVSGLTD--IVAIDAGEEFS 196
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL+ +G ++A+G + G+LG E +P + L D + +I+ G +A+ S G
Sbjct: 197 LALSEDGTVWAWGNNSVGQLG-NGTREKALQPVQVSELTD--VIAISTGEKQGYAVTSNG 253
Query: 364 VLYGWGMGNGYQLGNGKE---------DDI---------------LNSEGKIYAFGRHDY 399
+YGWG G +LG+G D I L +G ++A+G + +
Sbjct: 254 DVYGWGYNQG-KLGDGTNKSRNSPVLIDGIYDVIAVDSGKQHTLALKEDGTVWAWGTNTH 312
Query: 400 GRLGLKNVSEPVTEP-TPIPSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
G+LG PV TP + T I +I G S AI +G ++ WG +
Sbjct: 313 GQLGY---GTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNG 369
Query: 454 QLGNGKEDDILEPMKIE 470
+LG G + P KIE
Sbjct: 370 ELGLGHSKKQMYPAKIE 386
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
G+LG G + R + L++ + +V+ V G HT+ L EDG V+ WG N G LG
Sbjct: 263 GKLGDGTN-KSRNSPVLIDGIYDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPV 321
Query: 108 DSEFIPQTVNLP-----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
+ P V L + V I AG HS A+ +DGTV++WG +S+G +GL Q
Sbjct: 322 NYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSWG--FNSNGELGLGHSKKQ 379
Query: 163 KTPLKLESVS 172
P K+E+++
Sbjct: 380 MYPAKIETIN 389
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 40/226 (17%)
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
S V F HL+ + +++ F + G IY G G LG +V
Sbjct: 20 SPVASHAQDSFNYDHLLSADNNRTFMVKKDGS----------VIYGTGSDANGVLGSSSV 69
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---- 384
T P P+ L D + + G + A+ +G ++ WG +LGN K
Sbjct: 70 KGKTTSPVPVDDLSD--VLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTP 127
Query: 385 ---------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
L +G ++AFG++ G+LG +E +P + L D
Sbjct: 128 HHVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLG-DGTTETRVKPVQVSGLTD- 185
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
I +I G S A+ +G ++ WG + QLGNG + L+P+++
Sbjct: 186 -IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQPVQV 230
>gi|162450118|ref|YP_001612485.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161160700|emb|CAN92005.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1462
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 181/407 (44%), Gaps = 61/407 (14%)
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
ALV LD + +V G H++ L +DG V+ WG N G LG S+ +P +
Sbjct: 904 ALVPMLDRITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGTAKASQ-VPVKIPTLNGV 962
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
I+AG +HS+A+ DGTV+AWG+ ++HG +G + P+++ + ++++A G
Sbjct: 963 TAIAAGANHSLAVRGDGTVWAWGN--NAHGQLGDGTTSQRSEPVQVSELGQVLRVAGGTG 1020
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H + L + G + G GQLG ++ ++ R+ +S + H V G
Sbjct: 1021 HSLALKADGTVWAFGSNSHGQLG-VSTSTSQRSIAAPVSGI---------SHASAVACGG 1070
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ + G I +G N+ QLG+ + F P ++ D + ++
Sbjct: 1071 NSSAVLLPTGDIRTWGENSKGQLGDGVLGQAR------FLPTGVRGAFDSQTVAMS---L 1121
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H+L +G I A+GR YG G S TEP IP + + S+A G+ S A+
Sbjct: 1122 HTLVARKDGTIDAWGRDHYGEAGDFLGSGARTEPKRIPGI--SRVRSVAVGDRWSMALRK 1179
Query: 362 EGVLYGWGMGNGYQLGNGKEDD-----------------------------ILNSEGKIY 392
+G ++ WG+ + LG+GK D L +G ++
Sbjct: 1180 DGSVWTWGISSWGVLGDGKGCDSDFAYPGPLNQVAALSDIIQISASLYNGYALKKDGTVW 1239
Query: 393 AFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
+G + Y + LG P EP PIP L D I +I G+ A+
Sbjct: 1240 GWGFNSYYQELG----DRPGCEPAPIPGLSD--IVAIDAGDRFGLAL 1280
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 167/408 (40%), Gaps = 64/408 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG+ +R A V + + V GG + L G + TWG N
Sbjct: 1029 GTVWAFGSNSHGQLGVSTSTSQRSIAAPVSGISHASAVACGGNSSAVLLPTGDIRTWGEN 1088
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG- 155
+G LG G + F+P V + Q A H++ +DGT+ AWG RD +G G
Sbjct: 1089 SKGQLGDGVLGQARFLPTGVRGAFDS-QTVAMSLHTLVARKDGTIDAWG--RDHYGEAGD 1145
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G G + P ++ +S + +A G + L G++ T G G LG +
Sbjct: 1146 FLGSGARTEPKRIPGISRVRSVAVGDRWSMALRKDGSVWTWGISSWGVLGD------GKG 1199
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQ-LGE------- 266
++ P I + +YN + K G++ +G N+Y Q LG+
Sbjct: 1200 CDSDFAYPGPLNQVAALSDIIQISASLYNGYALKKDGTVWGWGFNSYYQELGDRPGCEPA 1259
Query: 267 -----ADSEVQKSGNTC-------------------------FFTPHLIKSLSDKKFTML 296
+D +G+ F +P ++L K
Sbjct: 1260 PIPGLSDIVAIDAGDRFGLALKKDGTLWGWGLGGRGYVDPLYFRSPAQFENL--KNVVRF 1317
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCV 355
+G S A+ ++GKI+ +G + YG+LG+ S TEP I D++ ++ G+
Sbjct: 1318 GAGTDSSAAVTADGKIWTWGANYYGQLGIAGASY-YTEPVDI---HDQSGFIDVSVGDWH 1373
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDD------ILNS--EGKIYAFG 395
I ++G ++GWG G QLG+G +L+S K+YA G
Sbjct: 1374 VLGIKADGTVWGWGHNGGGQLGDGTTQTRSTPVLLLSSIAAAKVYAMG 1421
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 181/450 (40%), Gaps = 106/450 (23%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS- 146
G V++WG N G LG D PQ + L + V I+AG HS+AL DG V AWG
Sbjct: 777 GVVWSWGDNSYGQLGDGTTADRATHPQALGL-QGIVAIAAGKRHSLALRGDGRVLAWGDD 835
Query: 147 ----------------------------------FRDSHGSMGL-----KGEGIQKTPLK 167
R S G++ G+ + P++
Sbjct: 836 SAAQLSNGAARTPNGFKPRKNTVFEWPTAPPWPPARRSTGTLPCTPARKSGDLLSLQPVR 895
Query: 168 LES----------VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+ + I I +G +H + L G + G GQLG T +++
Sbjct: 896 CSNSTLSPALVPMLDRITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGTAKAS----- 950
Query: 218 RGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
+VP+K ++ V ++ + G++ A+G N + QLG+ + Q+
Sbjct: 951 ---------QVPVKIPTLNGVTAIAAGANHSLAVRGDGTVWAWGNNAHGQLGDGTTS-QR 1000
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
S P + L + +A G HSLAL ++G ++AFG + +G+LG+ + +
Sbjct: 1001 S------EPVQVSELG--QVLRVAGGTGHSLALKADGTVWAFGSNSHGQLGVSTSTSQRS 1052
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK------------- 380
P+ + +++ACG S + G + WG + QLG+G
Sbjct: 1053 IAAPVSGISHA--SAVACGGNSSAVLLPTGDIRTWGENSKGQLGDGVLGQARFLPTGVRG 1110
Query: 381 -----------EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ +G I A+GR YG G S TEP IP + + S+A
Sbjct: 1111 AFDSQTVAMSLHTLVARKDGTIDAWGRDHYGEAGDFLGSGARTEPKRIPGI--SRVRSVA 1168
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G+ S A+ +G ++ WG+ + LG+GK
Sbjct: 1169 VGDRWSMALRKDGSVWTWGISSWGVLGDGK 1198
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 194/464 (41%), Gaps = 61/464 (13%)
Query: 20 VFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM 79
F T E PTL G V GD G D M L + + V GM
Sbjct: 669 AFGTFEGTPTLD-----GTVAPGTDGDKGT-----DSMRLIVGPLPLNEQQTLAVAPWGM 718
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSE-FIPQTVNLPKKAVQISAGDSHSVALLED 138
V DG ++ WG N +G LG EA + +P + + + +AG +H++AL
Sbjct: 719 --VATQTDGTLWAWGDNSQGTLGPEASTTAPGSLPVEIPITRAVFGTAAGGAHALALDGA 776
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
G V++WG +S+G +G + T + + GIV IA+G H + L G +L G
Sbjct: 777 GVVWSWGD--NSYGQLGDGTTADRATHPQALGLQGIVAIAAGKRHSLALRGDGRVLAWGD 834
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
QL R+ + R + E P T + T G +L+
Sbjct: 835 DSAAQLSNGAARTPNGFKPRKNTVFEWPTAPPWPPARRSTGT-LPCTPARKSGDLLSL-- 891
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
V+ S +T +P L+ L + T + +G+ HSLAL +G ++A+G +
Sbjct: 892 ----------QPVRCSNST--LSPALVPML--DRITAIVTGEEHSLALRQDGTVWAWGNN 937
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
G+LG+ ++ P IP+L +T+IA G S A+ +G ++ WG QLG+
Sbjct: 938 GNGQLGV-GTAKASQVPVKIPTLNG--VTAIAAGANHSLAVRGDGTVWAWGNNAHGQLGD 994
Query: 379 GKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
G L ++G ++AFG + +G+LG+ + +
Sbjct: 995 GTTSQRSEPVQVSELGQVLRVAGGTGHSLALKADGTVWAFGSNSHGQLGVSTSTSQRSIA 1054
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
P+ + +++ACG S + G + WG + QLG+G
Sbjct: 1055 APVSGISHA--SAVACGGNSSAVLLPTGDIRTWGENSKGQLGDG 1096
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 221/488 (45%), Gaps = 77/488 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
TG +V GQ G+LGLG DV ER + V D NV ++ G H LT +G V
Sbjct: 36 TGAPLVFVFGQNSYGELGLG-DVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVL 94
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQI---------SAGDSHSVALL-EDGTV 141
T G N G LG G++ ++++ PKK + SA ++A++ +DG +
Sbjct: 95 TVGFNGSGQLGH---GNN----KSISTPKKIESLKNIRITHISSANGCENLAIISQDGKL 147
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTS--------RG 191
Y G +++G +G + TP ++++ + + ++ H +++T +
Sbjct: 148 YTCG--YNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQT 205
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT-FISS 249
+ + G + GQLG+ + P + L + + G++++ F++
Sbjct: 206 TVYSVGRNDNGQLGQ----------EHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTV 255
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + + G N+ QLG D+ KS N P LI+SL +K A G +H+L
Sbjct: 256 HGEVFSCGFNDNGQLGHNDT---KSRNQ----PVLIESLKNKFIVQAACGYYHTLVRRDT 308
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G+IYAFGR+D G+LG++ + + +P I T+++I
Sbjct: 309 GEIYAFGRNDKGQLGIETNGQALIQPKQIQEF--LTVSNIQ-----------------HS 349
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK-TITSI 428
GN QL +G+E + +S+ + G GL + + + L K I+ I
Sbjct: 350 GGNQNQLHSGQEHNQPSSQ----SLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKI 405
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
ACG S A+ G L+ +G GN QLG G +D P ++ L++ V+ +A G H
Sbjct: 406 ACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVAS--LHDKKVIGIAGGFYH 463
Query: 489 SVILAKPK 496
+++L K K
Sbjct: 464 TIVLVKQK 471
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 139/340 (40%), Gaps = 75/340 (22%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGK----- 89
G + TCG + GQLG G T LV+ L + V V H++ +T+D +
Sbjct: 145 GKLYTCGYNNYGQLGHGTQ-SNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQ 203
Query: 90 ---VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAW 144
VY+ G ND G LG+E E P+ + ++ +Q + G HSV + G V++
Sbjct: 204 QTTVYSVGRNDNGQLGQEHTCH-EITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSC 262
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G F D+ G +G + P+ +ES+ IV+ A G H ++ G + G ++G
Sbjct: 263 G-FNDN-GQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKG 320
Query: 203 QLGRITQRSASRNARRGMSFL----------------------EPGEVPL---------- 230
QLG T A ++ FL +P L
Sbjct: 321 QLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGL 380
Query: 231 -----------------KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
K+ +I + G Y++ + G + FG N+ QLG+ ++E Q
Sbjct: 381 AESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQ 440
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
K P + SL DKK +A G +H++ L + K+
Sbjct: 441 K-------LPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473
>gi|171694087|ref|XP_001911968.1| hypothetical protein [Podospora anserina S mat+]
gi|170946992|emb|CAP73796.1| unnamed protein product [Podospora anserina S mat+]
Length = 518
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 151/345 (43%), Gaps = 73/345 (21%)
Query: 39 VLTCGQGDTGQLGLGPD-----------------------VMERKTFALVEDLDNVVEVV 75
+ G D +LGLGP+ +++ +F +++ VV++
Sbjct: 55 IYCLGSNDNAELGLGPNHRVGDVRVPTLNPFLSCPSPSEKSLKKGSFPTIKN--KVVQLA 112
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-------------------------- 109
VGGMH LT ++ TWG ND GALGR+
Sbjct: 113 VGGMHCAALTSTNEILTWGVNDNGALGRDTSSARLEEHLKNLTLHDDNSSTTSSEPDINP 172
Query: 110 -EFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG-SMGLKGEGIQK 163
E P V P K QI+A DS + L G +Y WG R S G S+ IQ+
Sbjct: 173 LESTPHPVPFPNINPPKWTQITACDSATFLLSTTGQIYGWGCTRSSQGVSLFTPQTAIQR 232
Query: 164 TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC-PEQGQLGRITQRSASRNARRGMSF 222
TPL + I KI++ +H + LT G + T G EQGQLGR R +RG S
Sbjct: 233 TPLPIPLPEPITKISARGNHILALTKTGQVYTWGLGSEQGQLGR-------RLPQRGNSL 285
Query: 223 LEPGEVP--LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
L P +K K+I D+ G ++F + G + A+GL+NY+Q G S + G F
Sbjct: 286 LSCAVTPRKIKLKNIIDIAAGPDHSFAVGENGEVWAWGLDNYAQTGALVSNRGEDGGGLF 345
Query: 280 F-TPHLIKS----LSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
TP + + L+ ++ L G HSL L +G +Y++GR D
Sbjct: 346 ISTPTRVTNLEGILNGRRIKYLTGGNSHSLCLLDDGSVYSWGRLD 390
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 39/177 (22%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG-----REAEGDSEFIP---QTVNLP 119
L N++++ G H+ + E+G+V+ WG ++ G R +G FI + NL
Sbjct: 297 LKNIIDIAAGPDHSFAVGENGEVWAWGLDNYAQTGALVSNRGEDGGGLFISTPTRVTNLE 356
Query: 120 -----KKAVQISAGDSHSVALLEDGTVYAWGSF--------------------------R 148
++ ++ G+SHS+ LL+DG+VY+WG R
Sbjct: 357 GILNGRRIKYLTGGNSHSLCLLDDGSVYSWGRLDSFATGVDIDTLTAQKGQKWEEEFVVR 416
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
D G + ++ PL I + +GA+H V +T G ++T G Q G
Sbjct: 417 DGRGRARIVTCPVRLLPLGEGENDKIRWVEAGAEHGVAVTVDGRVVTWGFNASCQTG 473
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 58/299 (19%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV--------NLPKKAVQISAGDSHS 132
T L+ G++Y WGC R ++G S F PQT LP+ +ISA +H
Sbjct: 200 TFLLSTTGQIYGWGCT------RSSQGVSLFTPQTAIQRTPLPIPLPEPITKISARGNHI 253
Query: 133 VALLEDGTVYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFV 185
+AL + G VY WG G +G +G + TP K++ + I+ IA+G DH
Sbjct: 254 LALTKTGQVYTWG-LGSEQGQLGRRLPQRGNSLLSCAVTPRKIK-LKNIIDIAAGPDHSF 311
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
+ G + G Q G + ++R G F+ P + +++ + G
Sbjct: 312 AVGENGEVWAWGLDNYAQTGALV---SNRGEDGGGLFI---STPTRVTNLEGILNGRRIK 365
Query: 246 FIS----------SKGSILAFG-LNNYSQLGEADSEVQKSGN------------------ 276
+++ GS+ ++G L++++ + D+ + G
Sbjct: 366 YLTGGNSHSLCLLDDGSVYSWGRLDSFATGVDIDTLTAQKGQKWEEEFVVRDGRGRARIV 425
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
TC + + K + +G H +A+ +G++ +G + + G + E + P
Sbjct: 426 TCPVRLLPLGEGENDKIRWVEAGAEHGVAVTVDGRVVTWGFNASCQTGHRGEEEEIKTP 484
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 96/271 (35%), Gaps = 70/271 (25%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-----------LKNV-----------S 329
K LA G H AL S +I +G +D G LG LKN+ S
Sbjct: 107 KVVQLAVGGMHCAALTSTNEILTWGVNDNGALGRDTSSARLEEHLKNLTLHDDNSSTTSS 166
Query: 330 EP-------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ------- 375
EP P P P++ T I + +F + + G +YGWG Q
Sbjct: 167 EPDINPLESTPHPVPFPNINPPKWTQITACDSATFLLSTTGQIYGWGCTRSSQGVSLFTP 226
Query: 376 --------------------LGNGKEDDILNSEGKIYAFGR-HDYGRLG--LKNVSEPVT 412
G L G++Y +G + G+LG L +
Sbjct: 227 QTAIQRTPLPIPLPEPITKISARGNHILALTKTGQVYTWGLGSEQGQLGRRLPQRGNSLL 286
Query: 413 EPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDD----I 463
P ++ K I IA G SFA+ G ++ WG+ N Q G N ED I
Sbjct: 287 SCAVTPRKIKLKNIIDIAAGPDHSFAVGENGEVWAWGLDNYAQTGALVSNRGEDGGGLFI 346
Query: 464 LEPMKIEGKQ--LNNYTVLQVASGGQHSVIL 492
P ++ + LN + + G HS+ L
Sbjct: 347 STPTRVTNLEGILNGRRIKYLTGGNSHSLCL 377
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 28/169 (16%)
Query: 311 KIYAFGRHDYGRLGLK------NVSEP-----VTEPTP---------IPSLQDKTITSIA 350
+IY G +D LGL +V P ++ P+P P++++K + +A
Sbjct: 54 RIYCLGSNDNAELGLGPNHRVGDVRVPTLNPFLSCPSPSEKSLKKGSFPTIKNKVV-QLA 112
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK----- 405
G A+ S + WG+ + LG L E + HD
Sbjct: 113 VGGMHCAALTSTNEILTWGVNDNGALGRDTSSARL--EEHLKNLTLHDDNSSTTSSEPDI 170
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
N E P P P++ T I + +F + + G +YGWG Q
Sbjct: 171 NPLESTPHPVPFPNINPPKWTQITACDSATFLLSTTGQIYGWGCTRSSQ 219
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 188/395 (47%), Gaps = 52/395 (13%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL-LEDG 139
+V +D ++++ G N+ G L + + KA++ AG + +A+ ++DG
Sbjct: 462 SVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDG 521
Query: 140 TVYAWGSFRDSH-GSMGLKGEGIQKTPLKLES--VSGIVKIASGADHFVMLTSRGNLLTA 196
V+ G + G+ + I TP++ S V +V A+G +H + + S G + +
Sbjct: 522 AVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSW 581
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILA 255
G ++GQLG + S S R S E + HI +++ +SS G +L
Sbjct: 582 GYNDRGQLGLGSTISKSHTPRMIDSLRE-------KYHITTAAVSYHHSAVVSSNGELLM 634
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
FG+N+ QLG ++ Q TP L+ SLS + T +A G +H++A+ S G++Y+F
Sbjct: 635 FGMNDCGQLGLDHTQHQH-------TPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSF 687
Query: 316 GRHDYGRLGL---KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
G++DYG+LGL +N+ P T + D+ I +++CG + I +G L WG +
Sbjct: 688 GKNDYGQLGLGHARNMKVPTLVKTSLGE-SDEKIVAVSCGYYHTVTISEKGKLITWGRND 746
Query: 373 GYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKN 406
QLG G +D IL S G++ FGR++ G+LG +
Sbjct: 747 YGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806
Query: 407 VSEPVTE-PTPIP--SLQDKTITSIACGNCVSFAI 438
+ P + P P+P SL + + IA G S+ +
Sbjct: 807 RTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 841
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 28/336 (8%)
Query: 37 GVVLTCGQGDTGQLGLGP----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V TCG +GQ G G ++ AL + N+V G H + + DG VY+
Sbjct: 521 GAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYS 580
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGD---SHSVALLEDGTVYAWGSFRD 149
WG ND G LG + P+ ++ ++ I+ HS + +G + +G +
Sbjct: 581 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG--MN 638
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +GL Q TP ++S+S I ++A G H + +TS G + + G + GQLG
Sbjct: 639 DCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLG 698
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
R+ S E E I V G Y+T IS KG ++ +G N+Y QLG
Sbjct: 699 HARNMKVPTLVKTSLGESDE------KIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGI 752
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ + S + P + S K + G +H+L L S G++ FGR++ G+LG
Sbjct: 753 GSKDHKNSAQ---YVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAG 805
Query: 327 NVSEPVTE-PTPIP--SLQDKTITSIACGNCVSFAI 359
+ + P + P P+P SL + + IA G S+ +
Sbjct: 806 SRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 841
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 61/343 (17%)
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE-----SVSGIVKIASGADHFVM 186
SVA +D +++ G ++++G + L G + KLE S I IA G + +
Sbjct: 462 SVASFDDCELFSCG--QNNYGELCL---GHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAV 516
Query: 187 LTSRGNLLTAGCPEQGQLGRIT--QRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGV 242
+ G + T G + GQ G T +R R +S + V +H+
Sbjct: 517 VMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHM------- 569
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQH 301
++S G++ ++G N+ QLG S + KS TP +I SL +K T A H
Sbjct: 570 --LAVASDGAVYSWGYNDRGQLGLG-STISKS-----HTPRMIDSLREKYHITTAAVSYH 621
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
HS ++S G++ FG +D G+LGL + T P + SL + IT +ACG + AI
Sbjct: 622 HSAVVSSNGELLMFGMNDCGQLGLDHTQHQHT-PQLVDSLSSQVITEVACGLYHTIAI-- 678
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL---KNVSEPVTEPTPIP 418
S G++Y+FG++DYG+LGL +N+ P T +
Sbjct: 679 ------------------------TSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLG 714
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
D+ I +++CG + I +G L WG + QLG G +D
Sbjct: 715 E-SDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKD 756
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 35/251 (13%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS--GQHHSL 304
+ G++ GLN Q G E + TP +++LS M+A+ G H L
Sbjct: 517 VMKDGAVFTCGLNKSGQCGNGTFEER----VIIATP--VRALSGIVINMVAAANGCEHML 570
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
A+ S+G +Y++G +D G+LGL + P I SL++K + I + V
Sbjct: 571 AVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREK------------YHITTAAV 618
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
Y +++S G++ FG +D G+LGL + T P + SL +
Sbjct: 619 SY-------------HHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHT-PQLVDSLSSQV 664
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ-LNNYTVLQVA 483
IT +ACG + AI S G +Y +G + QLG G ++ P ++ ++ ++ V+
Sbjct: 665 ITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVS 724
Query: 484 SGGQHSVILAK 494
G H+V +++
Sbjct: 725 CGYYHTVTISE 735
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
+ G +L G D GQLGL + T LV+ L + + EV G HT+ +T G+VY
Sbjct: 627 SSNGELLMFGMNDCGQLGLD-HTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVY 685
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP-----KKAVQISAGDSHSVALLEDGTVYAWGS 146
++G ND G LG + +P V +K V +S G H+V + E G + WG
Sbjct: 686 SFGKNDYGQLGL-GHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWG- 743
Query: 147 FRDSHGSMGLKGE----GIQKTPLKLESVSGIVKIAS-GADHFVMLTSRGNLLTAGCPEQ 201
R+ +G +G+ + Q PL L S +K AS G H ++L S G ++ G +
Sbjct: 744 -RNDYGQLGIGSKDHKNSAQYVPLPLSSK---IKTASCGCYHTLILMSNGRVMVFGRNNK 799
Query: 202 GQLG 205
GQLG
Sbjct: 800 GQLG 803
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTF---ALVEDLDNVVEVVVGGMHTVCLTEDGK 89
T GG V + G+ D GQLGLG M+ T +L E + +V V G HTV ++E GK
Sbjct: 679 TSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGK 738
Query: 90 VYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
+ TWG ND G LG ++ + ++++P + L K S G H++ L+ +G V +G
Sbjct: 739 LITWGRNDYGQLGIGSKDHKNSAQYVP--LPLSSKIKTASCGCYHTLILMSNGRVMVFG- 795
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG------IVKIASGADHFVMLTSR 190
R++ G +G + L L S +V+IA+G +LT R
Sbjct: 796 -RNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGR 844
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 55/356 (15%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRGNLLTA 196
++ WGS HG +GL G E TP L+ ++K A GA+H + LT G + +
Sbjct: 1 MFGWGS--TIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILA 255
G + GQLG R + L G L I +V G +++ +S G + +
Sbjct: 59 GSNDYGQLGHDQPRKRPQ--------LVSG---LDAYSIINVACGEMHSLALSRWGEVFS 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G +NY QLG + G T P LIKSL+ + +A+GQ HS+AL + G+I+ +
Sbjct: 108 WGSDNYGQLG------HQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVW 161
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G +D+G+LGL ++ + PT + SL IACG +FA+ G ++GWG
Sbjct: 162 GANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWG------ 215
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKN-VSEPVTEPTPIPSLQDKTITSIACGNCV 434
++ G+LGL + VS+ PT + +L++ + I+CG+
Sbjct: 216 --------------------KNINGQLGLNDTVSKKF--PTQLRTLRNSRVRFISCGDEF 253
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
S + +G ++ G G QLG+G + + P ++ +L T+ Q++ G QHS+
Sbjct: 254 STFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQV--LELMGSTITQISCGRQHSL 307
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 44/298 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG D GQLG RK LV LD +++ V G MH++ L+ G+V+
Sbjct: 50 TKDGKVYSCGSNDYGQLGHD---QPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVF 106
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV-NLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG ++ G LG + G + +P+ + +L K + VQI+AG HSVAL G ++ WG+ +
Sbjct: 107 SWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGA--N 164
Query: 150 SHGSMGL-KGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +GL + TP + S+SGI IA GA+H ++ G + G GQLG
Sbjct: 165 DFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGL 224
Query: 207 --------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
TQ RN+R + F+ G+ ++TF++ G + + G
Sbjct: 225 NDTVSKKFPTQLRTLRNSR--VRFISCGD--------------EFSTFLTLDGGVFSCGA 268
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAF 315
Y QLG G + P + L T ++ G+ HSLA S G++Y++
Sbjct: 269 GMYGQLGHG-------GTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 39/341 (11%)
Query: 43 GQGDT--GQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G T G+LGLG V K E +V++ +G HT+ LT+DGKVY+ G N
Sbjct: 3 GWGSTIHGELGLGGIEEEHVFTPKALDWFEA-KSVMKAALGANHTLFLTKDGKVYSCGSN 61
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
D G LG + PQ V+ + ++ G+ HS+AL G V++WGS D++G +
Sbjct: 62 DYGQLGHDQPRKR---PQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGS--DNYGQL 116
Query: 155 GLK-GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ--LGRITQ 209
G + G +Q P ++S++ +V+IA+G H V LT+ G + G + GQ LG IT
Sbjct: 117 GHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITP 176
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
++ +S +P + G +TF +S G++ +G N QLG D
Sbjct: 177 YESTPTTVCSLS-----GIPFAL-----IACGANHTFAVSKSGAVFGWGKNINGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ +K P +++L + + ++ G S L +G +++ G YG+LG
Sbjct: 227 TVSKK-------FPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGT 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGW 368
S + P + L TIT I+CG S A + S G +Y +
Sbjct: 280 SNEIL-PRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
FTP + K A G +H+L L +GK+Y+ G +DYG+LG +P P +
Sbjct: 23 FTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGH---DQPRKRPQLVS 79
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN----GYQLG------------------ 377
L +I ++ACG S A+ G ++ WG N G+QLG
Sbjct: 80 GLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQV 139
Query: 378 ----NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
G+ + L + G+I+ +G +D+G+LGL ++ + PT + SL IACG
Sbjct: 140 VQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGA 199
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+FA+ G ++GWG QL G D + + + + L N V ++ G + S L
Sbjct: 200 NHTFAVSKSGAVFGWGKNINGQL--GLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFL 257
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 167/331 (50%), Gaps = 29/331 (8%)
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT 115
V E + + + D ++ EV GG H++ L EDG+VYT G N +G LG E EG+ P+
Sbjct: 23 VTEPQAYGFISD-RSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQ 78
Query: 116 VN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVS 172
+ + + ++ G+SHS+AL + G +++WG+ D G +G E P ++ ++
Sbjct: 79 IGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD--GQLGHTTTEDSVAIPRLIKKLN 136
Query: 173 G--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
I++++ G H + L + G T G GQLG + + + +R S +PL
Sbjct: 137 QQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL---EGIPL 193
Query: 231 KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ V G ++F +S G++ +G NN QLG +D ++S P +K L
Sbjct: 194 AQ-----VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQS-------PCHVKLLR 241
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K ++ G+ H+ L G ++ FG +G+LG ++++ V P + L +T I
Sbjct: 242 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVN-PRRVLELMGSEVTQI 300
Query: 350 ACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
ACG + A + S G++Y +G G QLG G
Sbjct: 301 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 331
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 174/400 (43%), Gaps = 62/400 (15%)
Query: 143 AWGSFRDSH-GSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCP 199
WG + H G + +GI P +S I ++A G +H + L G + T G
Sbjct: 3 CWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLN 62
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 TKGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDQGQLFSWGA 111
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ QLG +E + P LIK L+ + ++ G H +AL ++G+ + +G++
Sbjct: 112 GSDGQLGHTTTEDSVA------IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQN 165
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G+LGL P + SL+ + +A G SFA+ G ++GWG N QLG
Sbjct: 166 RHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGL 225
Query: 379 GKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
E D +L G ++ FG +G+LG ++++ V
Sbjct: 226 SDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVN 285
Query: 413 EPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 286 -PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
Query: 472 K------QLNN-------YTVLQVASGGQHSVILAKPKPN 498
QL++ + V + SGG + +L N
Sbjct: 345 HWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVLCSKYEN 384
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 44/342 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P F++ ++ + C GG G V TCG GQLG + + + +
Sbjct: 26 PQAYGFISDRSIKEVAC--GGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALA 83
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
D +++ V G H++ L++ G++++WG +G LG DS IP+ + + +Q
Sbjct: 84 D-QHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQ 142
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGA 181
+S G+ H +AL DG + WG R HG +GL E Q +P +++S+ GI ++A+G
Sbjct: 143 VSCGNWHCMALAADGQFFTWGQNR--HGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGG 200
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFT 240
H L+ G + G GQLG + R+ P V L R + + +
Sbjct: 201 AHSFALSLSGAVFGWGRNNAGQLGL-----SDETDRQS-----PCHVKLLRTQKVVYISC 250
Query: 241 GVYNTFISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + +K G + FG ++ QLG + EV P + L + T +A
Sbjct: 251 GEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---------NPRRVLELMGSEVTQIA 301
Query: 298 SGQHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G+ H+LA S G IYAFG G+LG + V P+P+
Sbjct: 302 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 342
>gi|290986924|ref|XP_002676173.1| predicted protein [Naegleria gruberi]
gi|284089774|gb|EFC43429.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 184/435 (42%), Gaps = 58/435 (13%)
Query: 39 VLTCGQGDTGQLGLGPDV---MERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
V + G+ D G G V RK F+ ++ + ++ G + + E+GK+Y+WG
Sbjct: 33 VYSWGKNDYGVDADGTTVNHYQPRKVFSWDLQGPKGIAQIASGPYNFYAIDENGKLYSWG 92
Query: 95 CNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
ND G LG D + + L + ++ G +H++ L +G +Y++G
Sbjct: 93 KNDFGQLGDRTPIDKWRPVDVFMKGALLNQTVTRVCGGLTHTLVLANNGMLYSFGDNSKG 152
Query: 151 HGSMGLKGEGIQKTPLKLESV-------SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G+ I K K E V I I G +H ++L + G + G + GQ
Sbjct: 153 QLGIGVSSSVIAK---KWEPVLINFPFNDTIADIQCGDNHNLVLLTGGAMYAWGLNDYGQ 209
Query: 204 LG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
LG T +S + P K I+ + G Y + I G A+G NN
Sbjct: 210 LGDNTTTTRTKPTKVNTLSAIGP-------KRIEQIGAGGYTFYVIDENGKAYAWGRNNR 262
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG+ + + K + + L ++ + G+ H+L L S ++ A G + YG
Sbjct: 263 GQLGDK-TTIDKPRPVDVYMKGI---LLNQTVIRVCGGESHTLLLTSNNELAAMGDNTYG 318
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+LG+ EPT + + TI I CG + + S+G++YGWG + QLG+G +
Sbjct: 319 QLGVGTSGGYKMEPTRVNIKFNGTIMDIQCGENYNLVLTSKGLVYGWGRNDVGQLGSGDK 378
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
D L EPT I L++ T+ I SFA+ +E
Sbjct: 379 LDKL---------------------------EPTLISYLKNSTVVKIYARFSTSFALTNE 411
Query: 442 GVLYGWGMGNGYQLG 456
LY WG N YQLG
Sbjct: 412 SFLYAWGNNNQYQLG 426
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 167/391 (42%), Gaps = 58/391 (14%)
Query: 135 LLEDGTVYAWGSFR---DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
LL D VY+WG D+ G+ + + L+ GI +IASG +F + G
Sbjct: 27 LLADDAVYSWGKNDYGVDADGTTVNHYQPRKVFSWDLQGPKGIAQIASGPYNFYAIDENG 86
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTF 246
L + G + GQLG T R P +V +K ++ T V +
Sbjct: 87 KLYSWGKNDFGQLGDRTPIDKWR----------PVDVFMKGALLNQTVTRVCGGLTHTLV 136
Query: 247 ISSKGSILAFGLNNYSQLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+++ G + +FG N+ QLG + S + K + P LI + + G +H+L
Sbjct: 137 LANNGMLYSFGDNSKGQLGIGVSSSVIAKK-----WEPVLINFPFNDTIADIQCGDNHNL 191
Query: 305 ALNSEGKIYAFGRHDYGRLG--LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
L + G +YA+G +DYG+LG T+ + ++ K I I G + ID
Sbjct: 192 VLLTGGAMYAWGLNDYGQLGDNTTTTRTKPTKVNTLSAIGPKRIEQIGAGGYTFYVIDEN 251
Query: 363 GVLYGWGMGNGYQLGNGKEDD-----------------------------ILNSEGKIYA 393
G Y WG N QLG+ D +L S ++ A
Sbjct: 252 GKAYAWGRNNRGQLGDKTTIDKPRPVDVYMKGILLNQTVIRVCGGESHTLLLTSNNELAA 311
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
G + YG+LG+ EPT + + TI I CG + + S+G++YGWG +
Sbjct: 312 MGDNTYGQLGVGTSGGYKMEPTRVNIKFNGTIMDIQCGENYNLVLTSKGLVYGWGRNDVG 371
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
QLG+G + D LEP I L N TV+++ +
Sbjct: 372 QLGSGDKLDKLEPTLIS--YLKNSTVVKIYA 400
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
K I + +G YN + I G + ++G N++ QLG+ + + K F + +L ++
Sbjct: 67 KGIAQIASGPYNFYAIDENGKLYSWGKNDFGQLGDR-TPIDKWRPVDVF---MKGALLNQ 122
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT---EPTPIPSLQDKTITS 348
T + G H+L L + G +Y+FG + G+LG+ S + EP I + TI
Sbjct: 123 TVTRVCGGLTHTLVLANNGMLYSFGDNSKGQLGIGVSSSVIAKKWEPVLINFPFNDTIAD 182
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG--LKN 406
I CG+ + + + G +Y WG+ +DYG+LG
Sbjct: 183 IQCGDNHNLVLLTGGAMYAWGL--------------------------NDYGQLGDNTTT 216
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
T+ + ++ K I I G + ID G Y WG N QLG+ D P
Sbjct: 217 TRTKPTKVNTLSAIGPKRIEQIGAGGYTFYVIDENGKAYAWGRNNRGQLGDKTTIDKPRP 276
Query: 467 MKIEGKQ-LNNYTVLQVASGGQHSVILA 493
+ + K L N TV++V G H+++L
Sbjct: 277 VDVYMKGILLNQTVIRVCGGESHTLLLT 304
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ---DKTITSIACG 431
Q N ++L ++ +Y++G++DYG + + +P + S K I IA G
Sbjct: 17 QFTNSYYGNLLLADDAVYSWGKNDYG-VDADGTTVNHYQPRKVFSWDLQGPKGIAQIASG 75
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK-QLNNYTVLQVASGGQHSV 490
+AID G LY WG + QLG+ D P+ + K L N TV +V G H++
Sbjct: 76 PYNFYAIDENGKLYSWGKNDFGQLGDRTPIDKWRPVDVFMKGALLNQTVTRVCGGLTHTL 135
Query: 491 ILAK 494
+LA
Sbjct: 136 VLAN 139
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L E G+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEGGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLTTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARPDRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 40/335 (11%)
Query: 21 FVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVE 73
F++ +V + C GG V TCG GQLG + + + + D +++
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHIIH 88
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGDSH 131
V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+ H
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLT 188
+AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H L+
Sbjct: 149 CLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFI 247
G + G GQLG ++ P V L R + + + G +T +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHTAV 256
Query: 248 SSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+K G + FG + QLG + EV P + L + T +A G+ H+L
Sbjct: 257 LTKNGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQHTL 307
Query: 305 AL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
A S G IYAFG G+LG + V P+P+
Sbjct: 308 AFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 62/365 (16%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQ----KTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
+V++WG +D G +G+ G G +P ++ +++G I +I+ G H +L G +
Sbjct: 2 SVFSWGCTQD--GQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTV 59
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNTF-ISSKG 251
+ G ++GQLG+ R S E VP I V G +T ++ +G
Sbjct: 60 MMCGANDRGQLGQ--DRPGS----------ELAHVPATETLVITQVSCGNDHTLAVTDRG 107
Query: 252 SILAFGLNNYSQLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+L +G N+ Q G DSE ++ P +KSLS + +A G HS+AL +
Sbjct: 108 QVLGWGRNDRGQCGLSTGDSEDKRK-------PRFLKSLSSCQVAQVACGSMHSMALTRD 160
Query: 310 GKIYAFGRHDYGRLGLKNVSEPV--TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G+I+A+G + +G+LG+ + P + SL I +ACG SFA+ G ++G
Sbjct: 161 GRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFG 220
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG +++ G+LGL + V+ PTP+ +L+ K +
Sbjct: 221 WG--------------------------KNNCGQLGLGTTEDRVS-PTPLKNLKTKQVKY 253
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG + + + G L+ +G G+ QLG+G + + P ++G + QVA G Q
Sbjct: 254 IACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQG--FLGSEITQVACGRQ 311
Query: 488 HSVIL 492
H+++L
Sbjct: 312 HTLVL 316
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 201/484 (41%), Gaps = 66/484 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V+ CG D GQLG E E L + +V G HT+ +T+ G+V WG N
Sbjct: 57 GTVMMCGANDRGQLGQDRPGSELAHVPATETL-VITQVSCGNDHTLAVTDRGQVLGWGRN 115
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
D G G + GDSE + L + Q++ G HS+AL DG ++AWG +S G
Sbjct: 116 DRGQCGL-STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGD--NSFG 172
Query: 153 SMGLKGEG---IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR- 206
+G+ G + P +L S+ G I ++A G H L+ G + G GQLG
Sbjct: 173 QLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLG 232
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLG 265
T+ S + LK K + + G Y +++ G + FG + QLG
Sbjct: 233 TTEDRVSPTPLKN----------LKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLG 282
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE-GKIYAFGRHDYGRLG 324
+ P ++ + T +A G+ H+L L G+ ++ G+ G+LG
Sbjct: 283 HGSHSNE-------VNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLG 335
Query: 325 L-----KNVSEPVTEPTPIPSLQD---------KTITSIACGNCVSFAIDSEGVLYGWGM 370
L K+ + PV P PS + I SI G SF I S G
Sbjct: 336 LDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRG------- 388
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSI 428
D L+ I + + L+ VSE P+ EP+ + ++S
Sbjct: 389 --------NDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSP 440
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
AC N G L+ +G G+ QLG+G + + P + K + QVA G QH
Sbjct: 441 ACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSV--KDFLGNEITQVACGRQH 498
Query: 489 SVIL 492
+++L
Sbjct: 499 TLVL 502
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 178/401 (44%), Gaps = 63/401 (15%)
Query: 90 VYTWGCNDEGALGREAEGD---SEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAW 144
V++WGC +G LG GD S P+ V K+ +IS G H+ LL DGTV
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G+ + G +G G + + I +++ G DH + +T RG +L G ++GQ
Sbjct: 63 GA--NDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQC 120
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQ 263
G T S + R FL+ L + V G +++ ++ G I A+G N++ Q
Sbjct: 121 GLSTGDSEDKRKPR---FLK----SLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQ 173
Query: 264 LGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
LG + G T + P + SL LA G HS AL+ G ++ +G+++ G+
Sbjct: 174 LG-----IGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQ 228
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LGL + V+ PTP+ +L+ K + IACG + + + G L+ +G G+ QLG+G
Sbjct: 229 LGLGTTEDRVS-PTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHS 287
Query: 383 DILNSE---------------------------GKIYAFGRHDYGRLGL-----KNVSEP 410
+ +N G+ ++ G+ G+LGL K+ + P
Sbjct: 288 NEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASP 347
Query: 411 VTEPTPIPSLQD---------KTITSIACGNCVSFAIDSEG 442
V P PS + I SI G SF I S G
Sbjct: 348 VPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRG 388
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 186/447 (41%), Gaps = 53/447 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKV 90
T G VL G+ D GQ GL D +++ ++ L + V +V G MH++ LT DG++
Sbjct: 104 TDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRI 163
Query: 91 YTWGCNDEGALGREAEGDSEFI--PQTVN-LPKKAVQ-ISAGDSHSVALLEDGTVYAWGS 146
+ WG N G LG A G + + PQ ++ LP ++ ++ G HS AL G V+ WG
Sbjct: 164 FAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGK 223
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G + + TPLK + IA G ++ +LT+ G L G +GQLG
Sbjct: 224 NNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGH 283
Query: 207 ITQRSASRNARRGMSFL--EPGEVPLKRKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQ 263
+ S N R FL E +V R+H V G F S +GS GL+N S
Sbjct: 284 GSH-SNEVNPRSVQGFLGSEITQVACGRQHT-LVLEGRTGRFFSLGQGSKGQLGLDNDSS 341
Query: 264 LGEADS-----EVQKSGNTCFF---TPHLIKSL---SDKKFTMLASGQHHSLALNSEGKI 312
A E S C + +I S+ D+ F +++ G L+ I
Sbjct: 342 KSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRGNDPDHPLDFREAI 401
Query: 313 YAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ + L+ VSE P+ EP+ + ++S AC N G L+ +G
Sbjct: 402 PSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVGAGSGGLFLFGQ 461
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
G+ QLG+G + +N P + IT +AC
Sbjct: 462 GSEGQLGHGSHSNEVN---------------------------PRSVKDFLGNEITQVAC 494
Query: 431 GNCVSFAIDSE-GVLYGWGMGNGYQLG 456
G + ++ G Y G G+ QLG
Sbjct: 495 GRQHTLVLEGRTGGFYSLGQGSKGQLG 521
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 312 IYAFGRHDYGRLGLKNVSEPV---TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
++++G G+LG+ + + V + P +P+L K I I+CG
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGL--------------- 47
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
+ +L +G + G +D G+LG P +E +P+ + IT +
Sbjct: 48 -----------RHTCVLLRDGTVMMCGANDRGQLG---QDRPGSELAHVPATETLVITQV 93
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLG--NGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
+CGN + A+ G + GWG + Q G G +D +P + K L++ V QVA G
Sbjct: 94 SCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFL--KSLSSCQVAQVACGS 151
Query: 487 QHSVILAK 494
HS+ L +
Sbjct: 152 MHSMALTR 159
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 172/380 (45%), Gaps = 65/380 (17%)
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-------EGIQKTPLKLES----VSGIVK 176
G V L T+++WGS HG G G E IQK P K+E I K
Sbjct: 51 GREQKVTLAGARTLWSWGS--ADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKK 108
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A G H +++T G LLT G + GQLG +AS E EV + I
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENAS----------EFEEVK-GTESIA 157
Query: 237 DVFTGVYNTFISS-KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
DV G ++T +S KG + A+G N + QLG D+ V+ + P I L D
Sbjct: 158 DVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLA-----VEPQEILLLRDAPIKQ 212
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G +HS+AL +G++Y +G +GRLG +E P + +L + I+SI G
Sbjct: 213 VACGSYHSMALTKDGEVYTWGFGAHGRLG-HGSTEDEFMPKRVEALVGENISSIHAGFEY 271
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S A+ + G ++ WG G+ Y LG G + D L PV
Sbjct: 272 SSAVSTSGKVFVWGYGHFYVLGQGDKKDQL-----------------------APVVLDF 308
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE--DDILEPMKIEG-K 472
P +I +A G+ + A+ G+L+ WG LG+G + + ILEP ++
Sbjct: 309 PT------SIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPA 362
Query: 473 QLNNYTVLQVASGGQHSVIL 492
QL N QVA G QH++++
Sbjct: 363 QLQNSK--QVACGSQHTLVV 380
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 25/331 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G +LTCG D GQLGLG ++ F V+ +++ +V G HT+ ++ GK+Y W
Sbjct: 120 TESGRLLTCGLNDNGQLGLG-NLENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAW 178
Query: 94 GCNDEGALGREAEGDSEFI-PQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDS 150
G N G LG + PQ + L + A Q++ G HS+AL +DG VY WG +
Sbjct: 179 GSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGF--GA 236
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
HG +G + P ++E++ G I I +G ++ +++ G + G LG+
Sbjct: 237 HGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGD 296
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
++ L P + F + +S G + +G + LG
Sbjct: 297 KKDQ----------LAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG- 345
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
KS N L + +A G H+L + G +++FG G+LGL +
Sbjct: 346 ---LKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSD 402
Query: 329 SEPVTEPTPIPSLQDKTITSIACG--NCVSF 357
+ EP IP K++ +ACG +C+ F
Sbjct: 403 LDHY-EPKQIPRFVGKSLRQVACGLFHCIGF 432
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 51/259 (19%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLG----EADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
G ++ ++ G +L GLN+ QLG E SE ++ T +S++D +
Sbjct: 113 GAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGT--------ESIAD-----V 159
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCV 355
A+G H+LA + +GK+YA+G + +G+LG + + + EP I L+D I +ACG+
Sbjct: 160 AAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYH 219
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGK-EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
S A+ +G +Y WG G +LG+G ED+ + P
Sbjct: 220 SMALTKDGEVYTWGFGAHGRLGHGSTEDEFM----------------------------P 251
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
+ +L + I+SI G S A+ + G ++ WG G+ Y LG G + D L P+ ++
Sbjct: 252 KRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPT- 310
Query: 475 NNYTVLQVASGGQHSVILA 493
++ Q+A G H+ ++
Sbjct: 311 ---SIRQLAFGSFHAAAVS 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 166/377 (44%), Gaps = 61/377 (16%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNLPKKAVQISAGD 129
+ +V GG H++ +TE G++ T G ND G LG E SEF + V + ++AG
Sbjct: 106 IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEF--EEVKGTESIADVAAGF 163
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE----GIQKTPLKLESVSGIVKIASGADHFV 185
H++A + G +YAWGS + HG +G ++ + L + I ++A G+ H +
Sbjct: 164 WHTLAASKKGKLYAWGS--NKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSM 221
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YN 244
LT G + T G G+LG + F+ L ++I + G Y+
Sbjct: 222 ALTKDGEVYTWGFGAHGRLGHGSTED---------EFMPKRVEALVGENISSIHAGFEYS 272
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ +S+ G + +G ++ LG+ D + Q + F P I+ LA G H+
Sbjct: 273 SAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDF-PTSIR--------QLAFGSFHAA 323
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEP--VTEPTPIPS-LQDKTITSIACGNCVSFAIDS 361
A++ G ++ +G +G LG + P + EPT + + Q + +ACG+ + +
Sbjct: 324 AVSHSGMLFTWGHATHGPLG-HGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTG 382
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G ++ +G+G QLG G + D EP IP
Sbjct: 383 TGDVFSFGLGGQGQLGLGSDLDHY---------------------------EPKQIPRFV 415
Query: 422 DKTITSIACG--NCVSF 436
K++ +ACG +C+ F
Sbjct: 416 GKSLRQVACGLFHCIGF 432
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVTEPTPIPSLQDKTIT 347
L G+ + L ++++G D+GR G + V + E P L K I
Sbjct: 48 LIHGREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIK 107
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE------------------- 388
+ACG S + G L G+ + QLG G ++ E
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTL 167
Query: 389 -----GKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
GK+YA+G + +G+LG + + + EP I L+D I +ACG+ S A+ +G
Sbjct: 168 AASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDG 227
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+Y WG G +LG+G +D P ++E
Sbjct: 228 EVYTWGFGAHGRLGHGSTEDEFMPKRVE 255
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 373 GYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLG--------LKNVSEPVTEPTPIPSLQDK 423
G L +G+E + L ++++G D+GR G + V + E P L K
Sbjct: 45 GSNLIHGREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAK 104
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
I +ACG S + G L G+ + QLG G ++ E +++G + ++ VA
Sbjct: 105 LIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTE----SIADVA 160
Query: 484 SGGQHSVILAK 494
+G H++ +K
Sbjct: 161 AGFWHTLAASK 171
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 183/418 (43%), Gaps = 72/418 (17%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV+ WG ND+ LG +G +P K + I+ G + DG +YA G
Sbjct: 2986 KVFVWGLNDKDQLG-GLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACG- 3043
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQG 202
++G +GL TP +L S++ V K+A SG H + LT G + + G E G
Sbjct: 3044 -EGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3102
Query: 203 QLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNN 260
+LG + S R P + LK K I D+ G ++ ISS G + +GL
Sbjct: 3103 KLGHDNRLSLDR----------PKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGE 3152
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D+ Q P L+K+L +A G +LAL++EG ++++G
Sbjct: 3153 YGRLGHGDNLTQ-------LRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDG 3205
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + I CG S A+ G +Y WG G+ ++LG+
Sbjct: 3206 DFGKLG-RGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGH 3264
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
G + + V +PT + SL +K I +A G
Sbjct: 3265 GSD---------------------------QHVRKPTLVESLSEKKIVHVAVGALHCLCA 3297
Query: 439 DSEGVLYGWG------MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+G +Y WG GNG L N K +L +EG ++N +VA G HS+
Sbjct: 3298 TDQGQVYAWGDNDHGQQGNGTILVNRKPSLVL---NLEGVRVN-----RVACGSSHSI 3347
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 159/373 (42%), Gaps = 45/373 (12%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK------KAVQI 125
+ + G ++ DGK+Y G EG GR G S + L K V +
Sbjct: 3021 IHIAGGSKSLFIVSYDGKLYACG---EGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAV 3077
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADH 183
+G H++AL DG V++WG D G +G P +E++ I IA G+ H
Sbjct: 3078 HSGGKHAMALTLDGKVFSWGEGED--GKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSH 3135
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV 242
++S G L T G E G+LG ++ L P V L HI V G
Sbjct: 3136 SAAISSTGELFTWGLGEYGRLGH----------GDNLTQLRPKLVKALLGHHIVQVACGS 3185
Query: 243 YNT---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+ +S++G + ++G ++ +LG SE C PH I+ L+ M+ G
Sbjct: 3186 RDAQTLALSAEGLVFSWGDGDFGKLGRGGSE------GCDI-PHNIERLNGLGVCMIECG 3238
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
SLAL G++Y +G+ DY RLG + V +PT + SL +K I +A G
Sbjct: 3239 AQFSLALTKFGQVYTWGKGDYFRLG-HGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCA 3297
Query: 360 DSEGVLYGWG------MGNGYQLGNGKEDDILNSEG----KIYAFGRHDYGRLGLKNVSE 409
+G +Y WG GNG L N K +LN EG ++ H +
Sbjct: 3298 TDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTSDTHAP 3357
Query: 410 PVTEPTPIPSLQD 422
+TEP +L+D
Sbjct: 3358 NMTEPVLFTALKD 3370
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 34/242 (14%)
Query: 279 FFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
TP L++S+ +A SG H LAL+++GK+Y++G D G+LG N P
Sbjct: 4041 ILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGN-KNGCDHPQ 4099
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------- 383
I +LQ K I IACG S A+ + G +Y WG G +LG+G +D
Sbjct: 4100 LIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGF 4159
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
+ + ++++G DYG+LG + S+ P I SL + +
Sbjct: 4160 KVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVVKV 4218
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG+ S A+ G +Y WG G+ ++LG+G ++ + P KI L ++ +A+G H
Sbjct: 4219 ECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAA--LQGKKIICIATGSLH 4276
Query: 489 SV 490
V
Sbjct: 4277 CV 4278
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 45/316 (14%)
Query: 61 TFALVEDLDNV----VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
T L+E + ++ V V GG H + L+ DGKVY+WG D+G LG + + PQ +
Sbjct: 4043 TPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDH-PQLI 4101
Query: 117 NLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG- 173
+ K+ V I+ G +HS A+ G +Y WG R +G +G Q P +E++ G
Sbjct: 4102 DALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGR--YGRLGHGDSEDQMKPKLVETLIGF 4159
Query: 174 -IVKIA--SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
++ IA SG + +T N+ + G + G+LG RG S + ++P+
Sbjct: 4160 KVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG------------RGGS--DGCKIPM 4205
Query: 231 KRKHIDDVFTGV--------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
K + + + GV ++ ++ GS+ +G +Y +LG E + P
Sbjct: 4206 KIESLAGL--GVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRH-------P 4256
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
I +L KK +A+G H +A + G+++ +G +D G+LG + P + +LQ
Sbjct: 4257 KKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG-DGTMNAIHRPRLVVTLQ 4315
Query: 343 DKTITSIACGNCVSFA 358
K I +ACG+ S A
Sbjct: 4316 GKNINRVACGSAHSLA 4331
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 157/340 (46%), Gaps = 46/340 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG + +L + + V V GG H + LT DGKV++W
Sbjct: 3037 GKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSW 3096
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G ++G LG + + L K ++ I+ G SHS A+ G ++ WG G
Sbjct: 3097 GEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGL-----G 3151
Query: 153 SMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLG 205
G G G T L+ + V IV++A G+ + L++ G + + G + G+LG
Sbjct: 3152 EYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLG 3211
Query: 206 RITQRSAS--RNARR----GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R N R G+ +E G ++ ++ G + +G
Sbjct: 3212 RGGSEGCDIPHNIERLNGLGVCMIECG--------------AQFSLALTKFGQVYTWGKG 3257
Query: 260 NYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+Y +LG +D V+K P L++SLS+KK +A G H L +G++YA+G +
Sbjct: 3258 DYFRLGHGSDQHVRK--------PTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDN 3309
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
D+G+ G + +P+ + +L+ + +ACG+ S A
Sbjct: 3310 DHGQQGNGTILVN-RKPSLVLNLEGVRVNRVACGSSHSIA 3348
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 112/240 (46%), Gaps = 32/240 (13%)
Query: 282 PHLIKSLSDKKFTMLASGQ--HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P I+ K+ + LA+ HSLAL+ +G +Y++G D GRLG + + +PT I
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGD-NNSRDQPTKIT 568
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----ILNSEGKIY--- 392
L K + I+CG S A+ S G +Y WG GN +LG+G +D L K Y
Sbjct: 569 ELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIV 628
Query: 393 --AFGRHDYGRLGLKNV------------------SEPVTEPTPIPSLQDKTITSIACGN 432
A G D L + N S+ P I LQD + + CG+
Sbjct: 629 DIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGS 688
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S A+ G +Y WG G+ ++LG+G E+ + P +EG LN + +VA G H + L
Sbjct: 689 QFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG--LNGKCIKKVAVGSGHVLAL 746
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 169/400 (42%), Gaps = 73/400 (18%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
GT+Y WG + G +G ++G + K P E++S + V++ G + +TS G
Sbjct: 3968 GTIYGWG--HNHRGQLGGVEGPKV-KIPTSCEALSALRPVQLVGGEQTLLAVTSDG---- 4020
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
++ R G+ + P + I +F G + +
Sbjct: 4021 ----------KVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLAL 4070
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
S+ G + ++G + +LG + N C P LI +L K+ +A G HS A+
Sbjct: 4071 STDGKVYSWGEGDDGKLGHGNK------NGCDH-PQLIDALQGKEIVDIACGGAHSAAVT 4123
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
+ G+IY +G+ YGRLG + SE +P + +L + IACG + + I + +
Sbjct: 4124 AGGEIYTWGKGRYGRLGHGD-SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNV 4182
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G +Y +G+ DY
Sbjct: 4183 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDY 4242
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG E V P I +LQ K I IA G+ A G ++ WG + QLG+G
Sbjct: 4243 HRLG-HGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGT 4301
Query: 460 EDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ I P + ++GK +N +VA G HS+ + K
Sbjct: 4302 MNAIHRPRLVVTLQGKNIN-----RVACGSAHSLAWSTNK 4336
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 173/415 (41%), Gaps = 61/415 (14%)
Query: 35 GGGVVLTCGQGDTGQLG--LGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKV 90
G G + G GQLG GP V K E L + V +VGG T+ +T DGKV
Sbjct: 3966 GSGTIYGWGHNHRGQLGGVEGPKV---KIPTSCEALSALRPVQLVGGEQTLLAVTSDGKV 4022
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
Y G D+ P + ++ K V +++G H +AL DG VY+WG
Sbjct: 4023 YA-TGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGE 4081
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G + P ++++ G IV IA G H +T+ G + T G +G+
Sbjct: 4082 GDD--GKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWG---KGRY 4136
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF-TGVYNTF-ISSKGSILAFGLNNYS 262
GR+ + + + E + K ID +G T I+ ++ ++G +Y
Sbjct: 4137 GRLGHGDSEDQMKPKLV-----ETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4191
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S+ K P I+SL+ + G S+AL G +Y +G+ DY R
Sbjct: 4192 KLGRGGSDGCK-------IPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHR 4244
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG E V P I +LQ K I IA G+ A G ++ WG + QLG+G +
Sbjct: 4245 LG-HGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMN 4303
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
I P + +LQ K I +ACG+ S A
Sbjct: 4304 AI---------------------------HRPRLVVTLQGKNINRVACGSAHSLA 4331
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVAL 135
G H++ L+ DG VY+WG D G LG + +S P + + K + IS G ++S A+
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGH-GDNNSRDQPTKITELVGKNVIHISCGATYSAAV 588
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRG 191
G VY WG R ++G +G P + + IV IA SG + +T+ G
Sbjct: 589 TSSGEVYTWG--RGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTG 646
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSK 250
+ + G G + + + +E L+ + V+ G ++ ++
Sbjct: 647 LVFS-----WGDGGYGKLGTGGSDGSKTPKLIEK----LQDIEVARVYCGSQFSLALTKS 697
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
GS+ +G + +LG S N F P L++ L+ K +A G H LAL +G
Sbjct: 698 GSVYTWGKGDNHRLGHG------SENHVRF-PKLVEGLNGKCIKKVAVGSGHVLALTDDG 750
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++Y +GR+D G++G + V+EPT + LQ K I I CG S A W
Sbjct: 751 EVYGWGRNDNGQVG-ETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA---------WSS 800
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
N Y + + E + L VSE V P QDK ++AC
Sbjct: 801 SNTYSINLRVAFVVDICEETFCCLNQL------LMVVSEGVCRSHDWPPPQDKECMTVAC 854
Query: 431 GNCVSFAI 438
N + +
Sbjct: 855 LNLLRLQL 862
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 155/391 (39%), Gaps = 69/391 (17%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEFIPQTVNLPKKAVQISAGD 129
V ++V + LT GKVY + E + EG D + I + + A
Sbjct: 479 VKQIVCAERWLLILTLTGKVYIMYYSSETQCPEQIEGFDGKEISK--------LAAHADG 530
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVML 187
HS+AL DG VY+WG+ G +G + P K+ + G ++ I+ GA + +
Sbjct: 531 KHSLALSCDGDVYSWGN--GDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAV 588
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG---VYN 244
TS G + T G G+LG T + + V LK I D+ G
Sbjct: 589 TSSGEVYTWGRGNYGRLGHGTSEDHT---------VPTLVVGLKDYFIVDIACGSGDAQT 639
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+++ G + ++G Y +LG S+ K TP LI+ L D + + G SL
Sbjct: 640 LAVTNTGLVFSWGDGGYGKLGTGGSDGSK-------TPKLIEKLQDIEVARVYCGSQFSL 692
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL G +Y +G+ D RLG V P + L K I +A G+ A+ +G
Sbjct: 693 ALTKSGSVYTWGKGDNHRLG-HGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGE 751
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+YGWG + Q+G E + V+EPT + LQ K
Sbjct: 752 VYGWGRNDNGQVGETSETN---------------------------VSEPTLLTLLQGKN 784
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
I I CG S A W N Y +
Sbjct: 785 IVDIDCGPNQSIA---------WSSSNTYSI 806
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 37/254 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ +S G + ++G + +LG D+ + P I L K ++ G
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQ-------PTKITELVGKNVIHISCGA 582
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 358
+S A+ S G++Y +GR +YGRLG SE T PT + L+D I IACG + + A
Sbjct: 583 TYSAAVTSSGEVYTWGRGNYGRLG-HGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLA 641
Query: 359 IDSEGVLYGWGMGNGYQLGNGKED------------DI--------------LNSEGKIY 392
+ + G+++ WG G +LG G D DI L G +Y
Sbjct: 642 VTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVY 701
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+G+ D RLG V P + L K I +A G+ A+ +G +YGWG +
Sbjct: 702 TWGKGDNHRLG-HGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDN 760
Query: 453 YQLGNGKEDDILEP 466
Q+G E ++ EP
Sbjct: 761 GQVGETSETNVSEP 774
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S + +GLN+ QLG K P +SL+ K +A G ++
Sbjct: 2983 SPTKVFVWGLNDKDQLGGLKGSKVK-------VPVYSESLTALKPIHIAGGSKSLFIVSY 3035
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+GK+YA G GRLGL + S V P + SL I +A +
Sbjct: 3036 DGKLYACGEGTNGRLGLGH-SNNVATPCQLTSLNQYVIKKVAVHS--------------- 3079
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
GK L +GK++++G + G+LG N + P I +L+ K I I
Sbjct: 3080 ---------GGKHAMALTLDGKVFSWGEGEDGKLGHDN-RLSLDRPKMIEALKSKRIRDI 3129
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
ACG+ S AI S G L+ WG+G +LG+G L P + K L + ++QVA G +
Sbjct: 3130 ACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLV--KALLGHHIVQVACGSRD 3187
Query: 489 SVILA 493
+ LA
Sbjct: 3188 AQTLA 3192
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 148/380 (38%), Gaps = 48/380 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V + G GD G+LG G + + + E + NV+ + G ++ +T G+VYTWG
Sbjct: 540 GDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGR 599
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKK---AVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ G LG D V L + +GD+ ++A+ G V++WG
Sbjct: 600 GNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGD-GGYGK 658
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G KTP +E + I ++ G+ + LT G++ T G + +LG
Sbjct: 659 LGTGGSDG-SKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGH---- 713
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
S N R +E L K I V G + ++ G + +G N+ Q+GE
Sbjct: 714 -GSENHVRFPKLVE----GLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGE--- 765
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK---------IYAFGRHDY 320
+ T P L+ L K + G + S+A +S + +
Sbjct: 766 ----TSETNVSEPTLLTLLQGKNIVDIDCGPNQSIAWSSSNTYSINLRVAFVVDICEETF 821
Query: 321 GRLG--LKNVSEPVTEPTPIPSLQDKTITSIACGN--------CVSFAIDSEGVLYGWGM 370
L L VSE V P QDK ++AC N +S ID + V G+
Sbjct: 822 CCLNQLLMVVSEGVCRSHDWPPPQDKECMTVACLNLLRLQLYALISHNIDPKCV----GL 877
Query: 371 GNGYQLGNGKEDDILNSEGK 390
G L I+N K
Sbjct: 878 NPGSSLLTSLRQQIMNLASK 897
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGG--MHTVCLTEDGK 89
T G V T G+G+ G+LG G + LV L + +V++ G T+ +T G
Sbjct: 589 TSSGEVYTWGRGNYGRLGHGTS-EDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGL 647
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
V++WG + D P+ + + + ++ G S+AL + G+VY WG
Sbjct: 648 VFSWG-DGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGK- 705
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
D+H +G E + P +E ++G I K+A G+ H + LT G + G + GQ+G
Sbjct: 706 GDNH-RLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVG 764
Query: 206 RITQRSAS 213
++ + S
Sbjct: 765 ETSETNVS 772
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
K++ K + +V+ S+ L T G V T G+GD +LG G + R LVE
Sbjct: 671 KLIEKLQDIEVARVYCGSQFSLAL---TKSGSVYTWGKGDNHRLGHGSENHVRFP-KLVE 726
Query: 67 DLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAV 123
L+ + +V VG H + LT+DG+VY WG ND G +G +E + SE T+ K V
Sbjct: 727 GLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIV 786
Query: 124 QISAGDSHSVA 134
I G + S+A
Sbjct: 787 DIDCGPNQSIA 797
>gi|380805979|gb|AFE74865.1| regulator of chromosome condensation isoform b, partial [Macaca
mulatta]
Length = 114
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 14 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 73
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVAL 135
DEGALGR+ + SE IP V L +K VQ+SAGDSH+ AL
Sbjct: 74 DEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAAL 113
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
TE G V T G D G LG P V++P+ VQ AG H+V L + G VY++
Sbjct: 11 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSF 70
Query: 145 GSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLT 188
G + G++G EG + P K+E +V++++G H LT
Sbjct: 71 GC--NDEGALGRDTSVEGSEMIPGKVELQEKVVQVSAGDSHTAALT 114
>gi|111220973|ref|YP_711767.1| BNR repeat-containing protein [Frankia alni ACN14a]
gi|111148505|emb|CAJ60176.1| BNR repeat domain protein (partial) [Frankia alni ACN14a]
Length = 385
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 162/356 (45%), Gaps = 48/356 (13%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
G LG G +V D V +V GG H+V L DG V+T G N G LG
Sbjct: 21 GALGDGSTTTRLTPVQVVGLTDGVTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGDGTTT 80
Query: 108 DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
D P V+ QI+A ++AL DGTV+AWG+ +S+G +G + TP++
Sbjct: 81 DRR-TPGPVSGLTGITQIAANSHFTLALRSDGTVWAWGA--NSYGQLGDGSTRGRNTPVQ 137
Query: 168 LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
+ ++GI ++ +GA H + L + G + G E GQ+G + S S P +
Sbjct: 138 VSGLAGITQVDAGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRS----------TPTQ 187
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
V G ++ + G++ +GLN QLG+ T + +++
Sbjct: 188 VSGLTGVTQIAAGGGHSLVVRGDGAVWGWGLNRNGQLGD---------GTTRDSTTAVRA 238
Query: 288 LSDKKFTMLASGQHHSLAL-----NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+A+G+ HSLAL S G+++A+G + G+LG + ++ VT P IP L
Sbjct: 239 AGLTGVARIAAGETHSLALLGGAGLSSGQVFAWGDNSSGQLGDRTRTDRVT-PVRIPGLP 297
Query: 343 -----------------DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+++T IA GN S A+ S+G ++ WG Y LG+G E
Sbjct: 298 PAGATTSAAQGSGAAQGPRSVTQIATGNLHSLALLSDGTVWAWGR---YPLGDGTE 350
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 177/397 (44%), Gaps = 79/397 (19%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
AWG D G++G + TP+++ ++ G+ ++A+G H V+L S G + T+G
Sbjct: 14 AWGFNPD--GALGDGSTTTRLTPVQVVGLTDGVTQVAAGGYHSVVLRSDGTVWTSGLNLN 71
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG T RR PG V + + S G++ A+G N+Y
Sbjct: 72 GELGDGTTTD-----RR-----TPGPVSGLTGITQIAANSHFTLALRSDGTVWAWGANSY 121
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG+ + + TP + L+ T + +G H LAL ++G ++A+G +++G
Sbjct: 122 GQLGDGSTRGRN-------TPVQVSGLA--GITQVDAGAAHGLALRNDGTVWAWGDNEFG 172
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
++G + + T PT + L +T IA G S + +G ++GWG+ QLG+G
Sbjct: 173 QVGDGSTTSRST-PTQVSGLTG--VTQIAAGGGHSLVVRGDGAVWGWGLNRNGQLGDGTT 229
Query: 382 DDILN-----------------------------SEGKIYAFGRHDYGRLGLKNVSEPVT 412
D S G+++A+G + G+LG + ++ VT
Sbjct: 230 RDSTTAVRAAGLTGVARIAAGETHSLALLGGAGLSSGQVFAWGDNSSGQLGDRTRTDRVT 289
Query: 413 EPTPIPSLQD-----------------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
P IP L +++T IA GN S A+ S+G ++ WG Y L
Sbjct: 290 -PVRIPGLPPAGATTSAAQGSGAAQGPRSVTQIATGNLHSLALLSDGTVWAWGR---YPL 345
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G+G E P+K+ L V QV+ GG S+ +
Sbjct: 346 GDGTETTRESPVKV----LALSGVRQVSGGGFFSMAV 378
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLT-----EDGK 89
G G V G GQLG G + T L V + G H++ L G+
Sbjct: 209 GDGAVWGWGLNRNGQLGDG-TTRDSTTAVRAAGLTGVARIAAGETHSLALLGGAGLSSGQ 267
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLP------------------KKAVQISAGDSH 131
V+ WG N G LG D + LP + QI+ G+ H
Sbjct: 268 VFAWGDNSSGQLGDRTRTDRVTPVRIPGLPPAGATTSAAQGSGAAQGPRSVTQIATGNLH 327
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVM 186
S+ALL DGTV+AWG + +G E +++P+K+ ++SG+ ++ SG F M
Sbjct: 328 SLALLSDGTVWAWGRY-----PLGDGTETTRESPVKVLALSGVRQV-SGGGFFSM 376
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 815
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 816 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 873
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 874 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 925
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 926 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 978
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 979 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 1029
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 1030 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 1070
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 1071 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 1125
Query: 497 P 497
P
Sbjct: 1126 P 1126
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 755 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 813
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 814 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 873
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 874 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 928
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 929 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 981
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 982 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 1034
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 1035 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 1089
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 1090 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 863 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 916
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 917 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 973
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 974 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1031
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 1032 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 1081
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 1082 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 1133
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 1134 AQVPMEYNHL 1143
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P LI++L K+ +A G HS AL S G++Y +G +YGRLG + + + +P + L
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL-KPKMVKVL 64
Query: 342 QDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
+ +ACG + + A+ EG+++ WG G D+
Sbjct: 65 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDG--------------------------DF 98
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV-----LYGWGMGNGYQ 454
G+LG + SE P I L + + I CG S A+ GV +Y WG + Q
Sbjct: 99 GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQ 157
Query: 455 LGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
GNG +P ++G L + +VA G HSV
Sbjct: 158 QGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 191
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 1018 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 1076
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 1077 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 64 LVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LP 119
L+E L + ++ G H+ LT G++YTWG + G LG + ++ P+ V L
Sbjct: 8 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLG 66
Query: 120 KKAVQISAG--DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIV 175
+ +Q++ G D+ ++AL ++G V++WG G +G G P +E ++ G+
Sbjct: 67 HRVIQVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGRGGSEGCNIPQNIERLNGQGVC 124
Query: 176 KIASGADHFVMLTSRGNLLT 195
+I GA + LT G + T
Sbjct: 125 QIECGAQFSLALTKSGVVWT 144
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
+P I +L+ K I IACG+ S A+ S G LY WG+G +LG+G L+P + K
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--K 62
Query: 473 QLNNYTVLQVASGGQHSVILA 493
L + V+QVA G + + LA
Sbjct: 63 VLLGHRVIQVACGSRDAQTLA 83
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-----GI 174
K+ I+ G SHS AL G +Y WG G G G G T LK + V +
Sbjct: 15 KRIRDIACGSSHSAALTSSGELYTWGL-----GEYGRLGHGDNTTQLKPKMVKVLLGHRV 69
Query: 175 VKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGR-------ITQRSASRNARRGMSFLEP 225
+++A G+ + LT G + + G + G+LGR I Q N +G+ +E
Sbjct: 70 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-QGVCQIEC 128
Query: 226 GEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
G + + +GV T+ + A+G N++ Q G + V + P L+
Sbjct: 129 G----AQFSLALTKSGVVWTW-----QVYAWGDNDHGQQGNGTTTVNRK-------PTLV 172
Query: 286 KSLSDKKFTMLASGQHHSLALNS 308
+ L +K T +A G HS+A +
Sbjct: 173 QGLEGQKITRVACGSSHSVAWTT 195
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 281
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 282 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 339
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 340 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 391
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 392 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 444
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 445 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 495
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 496 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 536
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 537 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 591
Query: 497 P 497
P
Sbjct: 592 P 592
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 221 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 279
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 280 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 339
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 340 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 394
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 395 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 447
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 448 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 500
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 501 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 555
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 556 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 586
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 306 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 363
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 364 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 416
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 417 IDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 474
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 475 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 524
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 525 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 576
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 577 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 609
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 183/432 (42%), Gaps = 73/432 (16%)
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF---- 111
V + +T L+ D+ N+V++V G H+ + + +VY WGCN LG E ++
Sbjct: 15 VNKVQTPHLISDISNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQAD 74
Query: 112 IPQTVNLP--------KKAVQISAGDSHSVAL-LEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
IP+ + +P KK IS G +HS A E VY WG +G +G K
Sbjct: 75 IPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGI--GEYGKLGNKESKDL 132
Query: 163 KTPLKLESVSG-------IVKIASGADHFVML---------TSRGNLLTAGCPEQGQLGR 206
+ P + I +I+ G +H V + S+ L G QLG
Sbjct: 133 QYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGI 192
Query: 207 ITQRSASRNARRGMS--FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
T ++ N MS + E G V + D + I +G I ++G +++L
Sbjct: 193 DTGKTDYVNQPLEMSPDYWE-GNVESVKACSD------FTIAIDKQGRIFSWGKGGFNRL 245
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G V + P I+SLS ++ + G HS A+ + G++Y +GR G+LG
Sbjct: 246 GYKAEIVNQKH------PLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLG 299
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ P + +LQ+ I S+ACG + A+ L+ WG+ + QLG E+
Sbjct: 300 HGQAKADIF-PKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASEN-- 356
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
LK+ ++P I +DK+I IACG+ S + +G +
Sbjct: 357 -------------------LKS-----SDPKKISFFEDKSIKQIACGSKHSLVLLQDGTV 392
Query: 445 YGWGMGNGYQLG 456
Y WG QLG
Sbjct: 393 YSWGSNQYGQLG 404
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 163/384 (42%), Gaps = 66/384 (17%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMS 221
+TP + +S IVKI GA+H + + + GC LGR + N
Sbjct: 19 QTPHLISDISNIVKIVCGANHSYAIDTNFEVYAWGC----NLGRKLGLSDEYYNQIFQAD 74
Query: 222 FLEPGEVPLK-----RKHIDDVFTGVYNTFISSK--GSILAFGLNNYSQLGEADSEVQKS 274
E ++P+K K I+++ TG ++F S + +G+ Y +LG +S+
Sbjct: 75 IPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESK---- 130
Query: 275 GNTCFFTPHLIKSLSDK-----KFTMLASGQHHSLAL---------NSEGKIYAFGRHDY 320
P + L + + ++ G++H++A+ S+ K+Y +G
Sbjct: 131 ---DLQYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSD 187
Query: 321 GRLGLKN-VSEPVTEPTPI-PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+LG+ ++ V +P + P + + S+ + + AID +G ++ WG G +LG
Sbjct: 188 WQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKACSDFTIAIDKQGRIFSWGKGGFNRLGY 247
Query: 379 GKE---------------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E + + G++Y +GR G+LG +
Sbjct: 248 KAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADI 307
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMKIE 470
P + +LQ+ I S+ACG + A+ L+ WG+ + QLG E+ +P KI
Sbjct: 308 F-PKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKIS 366
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ ++ Q+A G +HS++L +
Sbjct: 367 F--FEDKSIKQIACGSKHSLVLLQ 388
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 156/347 (44%), Gaps = 41/347 (11%)
Query: 65 VEDLDN--VVEVVVGGMHTVCL-TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN---- 117
V +L N + + G H+ TE +VY WG + G LG + D ++ P+ N
Sbjct: 85 VTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQY-PEIFNGLKQ 143
Query: 118 ---LPKKAVQISAGDSHSVALLEDGTV---------YAWGSFRDSH-----GSMGLKGEG 160
+ + +IS G++H+VA+++ V Y WGS D G +
Sbjct: 144 PEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQP 203
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
++ +P E + + + +D + + +G + + G +G R+ ++ N + +
Sbjct: 204 LEMSPDYWEG--NVESVKACSDFTIAIDKQGRIFSWG---KGGFNRLGYKAEIVNQKHPL 258
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
E K++ I ++ I++ G + +G ++ QLG ++
Sbjct: 259 QI----ESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKAD-------I 307
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P +++L + +A G+ H+LAL+ +++++G + G+LG + + ++P I
Sbjct: 308 FPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISF 367
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
+DK+I IACG+ S + +G +Y WG QLG ++ + N+
Sbjct: 368 FEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNT 414
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 39 VLTCGQGDTGQLGLGPDVMER---KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
+ + G +GQLG + ++ K + ED ++ ++ G H++ L +DG VY+WG
Sbjct: 339 LFSWGLNSSGQLGRASENLKSSDPKKISFFED-KSIKQIACGSKHSLVLLQDGTVYSWGS 397
Query: 96 NDEGALGREAEGDSE 110
N G LG + + +++
Sbjct: 398 NQYGQLGFDQDSNAQ 412
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 174/361 (48%), Gaps = 27/361 (7%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKTF 62
K A+N + K ++ ++ V + C T G + G D GQLGLG + + +F
Sbjct: 24 KFADNIANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSF 83
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKK 121
+ V +V G HT+ +E GK++++GCN++G LG + ++E +P+ + ++P+
Sbjct: 84 VKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGH-VDKENELLPKEIESIPQM 142
Query: 122 AV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
+ QI+ G HS+ L EDG VY WG+ ++ G +GL E P KL+ +V ++ G
Sbjct: 143 EIKQIACGTYHSIILSEDGDVYVWGN--NNEGQLGLGEEVENSLPKKLKFKKEVVSVSCG 200
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H ++T G L T G E G+LG + + ++ + ++ +P V
Sbjct: 201 YYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVA------MPADNDEYISVSC 254
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +T I+ +G A+G + QLG ++ P IK LS +K ++ G
Sbjct: 255 GARHTVAITKQGHCYAWGDGSQGQLGHGTKLLE------VNEPKQIKKLSGQKCISVSCG 308
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
+ H+ + GK++ FG +G+LG S + +P + + ++CG C +
Sbjct: 309 ESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLV 368
Query: 359 I 359
+
Sbjct: 369 L 369
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 160/353 (45%), Gaps = 53/353 (15%)
Query: 173 GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
G+V++A G +H ++T G L G + GQLG +S ++ SF++P LK
Sbjct: 39 GVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNK-----PSFVKP----LKP 89
Query: 233 KHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ + V G +T + S G + +FG N QLG D E + P I+S+
Sbjct: 90 EKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENE-------LLPKEIESIPQM 142
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ +A G +HS+ L+ +G +Y +G ++ G+LGL E V P K + S++C
Sbjct: 143 EIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGL---GEEVENSLPKKLKFKKEVVSVSC 199
Query: 352 GNCVSFAIDSEGVLYGWGMG-------NGYQLGN----------GKEDDILN-------- 386
G + + +G LY +G + QL N D+ ++
Sbjct: 200 GYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHT 259
Query: 387 ----SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+G YA+G G+LG V EP I L + S++CG + + G
Sbjct: 260 VAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESG 319
Query: 443 VLYGWGMGNGYQLGNGKE--DDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
++ +G G +LG G++ + +P+ + + N + V+ V+ GG H+++LA
Sbjct: 320 KVFTFGDGRHGKLGQGEDSFSNSFDPVYLS--RFNYFNVVYVSCGGCHTLVLA 370
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 159/337 (47%), Gaps = 27/337 (8%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQIS 126
D VVE+ G H+ +TE G++Y +G ND G LG S P V P+K +++
Sbjct: 38 DGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGL-GHTKSLNKPSFVKPLKPEKVRKVA 96
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF 184
G +H++ E G ++++G D G +G + + P ++ES+ I +IA G H
Sbjct: 97 CGRNHTIVYSESGKLFSFGCNED--GQLGHVDKENELLPKEIESIPQMEIKQIACGTYHS 154
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
++L+ G++ G +GQLG + S P ++ K K + V G Y+
Sbjct: 155 IILSEDGDVYVWGNNNEGQLGLGEEVENSL----------PKKLKFK-KEVVSVSCGYYH 203
Query: 245 T-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHH 302
T ++ G + FG N +LG + S++ NT P + +D ++ ++ G H
Sbjct: 204 TALVTRDGFLYTFGENELGKLGLSSSQL---SNTT--VPQSVAMPADNDEYISVSCGARH 258
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++A+ +G YA+G G+LG V EP I L + S++CG + +
Sbjct: 259 TVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTES 318
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
G ++ +G G +LG G ED NS +Y R +Y
Sbjct: 319 GKVFTFGDGRHGKLGQG-EDSFSNSFDPVY-LSRFNY 353
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 161/355 (45%), Gaps = 65/355 (18%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQK----TPLKLESVSGIVKI 177
V+++ GD HS + E G +Y +GS + G +GL + + K PLK E V K+
Sbjct: 41 VEMACGDEHSAVVTESGRLYVFGS--NDWGQLGLGHTKSLNKPSFVKPLKPEKVR---KV 95
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHID 236
A G +H ++ + G L + GC E GQLG + + + L P E+ + + I
Sbjct: 96 ACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENE----------LLPKEIESIPQMEIK 145
Query: 237 DVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ G Y++ I S G + +G NN QLG + EV+ S L K L KK +
Sbjct: 146 QIACGTYHSIILSEDGDVYVWGNNNEGQLGLGE-EVENS---------LPKKLKFKKEVV 195
Query: 296 LAS-GQHHSLALNSEGKIYAFGRHDYGRLGLKNV---SEPVTEPTPIPSLQDKTITSIAC 351
S G +H+ + +G +Y FG ++ G+LGL + + V + +P+ D+ I S++C
Sbjct: 196 SVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYI-SVSC 254
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE---------------------------DDI 384
G + AI +G Y WG G+ QLG+G + +
Sbjct: 255 GARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAV 314
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAI 438
+ GK++ FG +G+LG S + +P + + ++CG C + +
Sbjct: 315 VTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVL 369
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 138/280 (49%), Gaps = 39/280 (13%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ ++ G + FG N++ QLG + KS N P +K L +K +A G++H
Sbjct: 49 HSAVVTESGRLYVFGSNDWGQLGLGHT---KSLNK----PSFVKPLKPEKVRKVACGRNH 101
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++ + GK+++FG ++ G+LG + + P I S+ I IACG S + +
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENELL-PKEIESIPQMEIKQIACGTYHSIILSED 160
Query: 363 GVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHD 398
G +Y WG N QLG G+E + ++ +G +Y FG ++
Sbjct: 161 GDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENE 220
Query: 399 YGRLGLKNV---SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
G+LGL + + V + +P+ D+ I S++CG + AI +G Y WG G+ QL
Sbjct: 221 LGKLGLSSSQLSNTTVPQSVAMPADNDEYI-SVSCGARHTVAITKQGHCYAWGDGSQGQL 279
Query: 456 GNG-KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G+G K ++ EP +I K+L+ + V+ G H+ ++ +
Sbjct: 280 GHGTKLLEVNEPKQI--KKLSGQKCISVSCGESHTAVVTE 317
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 34/200 (17%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G HS + G++Y FG +D+G+LGL + ++ + +P+ + L+ + + +ACG
Sbjct: 43 MACGDEHSAVVTESGRLYVFGSNDWGQLGLGH-TKSLNKPSFVKPLKPEKVRKVACGRNH 101
Query: 356 SFAIDSEGVLYGWGMGNGYQLGN-GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
+ G L+ +G QLG+ KE+++L P
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENELL----------------------------P 133
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
I S+ I IACG S + +G +Y WG N QLG G+E + P K++ K+
Sbjct: 134 KEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK- 192
Query: 475 NNYTVLQVASGGQHSVILAK 494
V+ V+ G H+ ++ +
Sbjct: 193 ---EVVSVSCGYYHTALVTR 209
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTF----ALVEDLDNVVEVVVGGMHTVCLTEDGK 89
T G + T G+ + G+LGL + T A+ D D + V G HTV +T+ G
Sbjct: 208 TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGH 267
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--------KAVQISAGDSHSVALLEDGTV 141
Y WG +G LG + VN PK K + +S G+SH+ + E G V
Sbjct: 268 CYAWGDGSQGQLGHGTK------LLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKV 321
Query: 142 YAWGSFRDSHGSMGLKGEGIQKT--PLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
+ +G R HG +G + + P+ L + +V ++ G H ++L N
Sbjct: 322 FTFGDGR--HGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFV 379
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPL-------KRKHIDDVFTGVYNTFISSK 250
E +T + + + A L P + P+ KR+H D +T T S+K
Sbjct: 380 DGENSLRASMTSQKSLKEANMT---LRPEDSPILSSSPRNKRRHKD--WTMNNETDKSNK 434
Query: 251 GSIL 254
G L
Sbjct: 435 GGSL 438
>gi|219120581|ref|XP_002181026.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407742|gb|EEC47678.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 520
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 181/413 (43%), Gaps = 81/413 (19%)
Query: 37 GVVLTCGQGDTGQLG--LGPDVMERKTFA--LVEDL--DNVVEVVVGGMHTVCLTEDGKV 90
G VL GQ D GQ+G L D + T+ +++ L +V ++ GG+H++ +T DG
Sbjct: 62 GDVLGFGQDDCGQIGYVLSKDEDKPTTYLPFVIKSLVRKDVRQISAGGVHSLAVTADGDA 121
Query: 91 YTWGCNDEGALGREAEGDSEFIPQT------------VNLPKKAVQISAGDSHSVALLED 138
Y+WG +D+G LGR+ E D+ T +N ++ VQ+ AG SHS+ L
Sbjct: 122 YSWGTDDDGTLGRKNEADTAIDATTPSPVVGFRTVDGINEDRQIVQVCAGASHSLFLSYS 181
Query: 139 GTVYA--------WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF-VMLTS 189
G VY+ G FRD ++ G + P+ + + V S F +
Sbjct: 182 GNVYSSGMMKDMDSGKFRDIQ-TVEDDPAGYNEKPVHVALMPKKVTFISTTTAFSAAILE 240
Query: 190 RGNLLTAGCPE----QGQLGRITQRSASRNAR----RGMSFL-----EPGE-------VP 229
G ++T C + G+L R A +N G F E G+ P
Sbjct: 241 DGTMVTWDCSKGFGNHGELARTATMGAKKNKEGRPDLGQGFFYTTKQEDGDGNVRFVATP 300
Query: 230 -LKRKH-----------------IDDVFTGVYNTFI------SSKGSILAFGLNNYSQLG 265
L R+H + +V G Y+ +K + + G+NNY QLG
Sbjct: 301 SLVREHFLTPKPPIWSFGSPQKKVINVACGSYHLLAVAREPDDAKLRVYSSGINNYGQLG 360
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG-KIYAFGRHDYGRLG 324
+ D V+ + +IK+L D+ +A G+ HSLALN G K++AFGR DYG+LG
Sbjct: 361 QGDFGVETERHEL----TMIKALEDENIVKVACGEFHSLALNLIGTKVFAFGRADYGQLG 416
Query: 325 LKNVSEPVTEPTP----IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
K TP PS + I I G+ S AI + +Y WG G+G
Sbjct: 417 TKLFDFGECGATPEQVAFPSEERVIIADIDAGSSHSMAITIDDEVYSWGFGDG 469
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4023
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4024 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4082 GKLGHGNRSPCDRP--RVIESLRGTEV------VDIAAGGAHSACITAAGELYTWGKGRY 4133
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4134 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4186
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL +T + CG+ S A+ G +Y WG G
Sbjct: 4187 YGKLG-RGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKG-------- 4237
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4238 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4278
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4279 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4333
Query: 497 P 497
P
Sbjct: 4334 P 4334
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 40/248 (16%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P L++ L+ + +A+ GQH+ LAL++ +++++G D GRLG + + EP +
Sbjct: 484 PQLVQGLASRNIVKIAAHPDGQHY-LALSATSELFSWGCGDGGRLGHGDTVS-LEEPKLV 541
Query: 339 PSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------- 383
+L K + IACG+ S AI ++G LY WG GN +LG+G +D
Sbjct: 542 SALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLK 601
Query: 384 -----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
+ G+++++G DYG+LG + S+ P I LQD I
Sbjct: 602 GLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIV 660
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
+ CG+ S AI +G +Y WG G+ +LG+G E+ + P + G L V+ VA G
Sbjct: 661 KVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNG--LQGKKVVDVAVGS 718
Query: 487 QHSVILAK 494
H + L +
Sbjct: 719 THCLALTE 726
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 45/298 (15%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
IVKIA+ D H++ L++ L + GC + G+LG + S + +S L + +
Sbjct: 495 IVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGH--GDTVSLEEPKLVSALSGKQTGKQ 552
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
HI Y+ I++ G + +G NY +LG SE Q P L+ L
Sbjct: 553 VIHI--ACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQT-------VPMLVTGLKGL 603
Query: 292 KFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K ++ SG +L++ G+++++G DYG+LG + S+ P I LQD I +
Sbjct: 604 KVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKV 662
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------------- 384
CG+ S AI +G +Y WG G+ +LG+G E+ +
Sbjct: 663 RCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCL 722
Query: 385 -LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L G++Y++G +D + +++PV P+ +P L K I I+CG SFA S
Sbjct: 723 ALTESGEVYSWGSNDQCQHFDTLRIAKPV--PSVLPGLDSKHIVGISCGPAQSFAWSS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3963 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4021
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4022 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V IA+G H +T+ G L T G +G+ GR+
Sbjct: 4082 --GKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWG---KGRYGRL 4136
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 4137 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4189
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ T + G S+AL G +Y +G+ DY RL
Sbjct: 4190 LGRGGSDGCK-------VPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRL 4242
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4243 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4297
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4298 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4328
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 168/392 (42%), Gaps = 64/392 (16%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTAEGKVYACG 3021
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3022 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3081 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3132 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN------ 372
D+G+LG + SE P I L + + I CG S A+ GV++ W
Sbjct: 3185 DFGKLG-RGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVX 3243
Query: 373 ----------------------GYQLGNGKEDDILN-----SEGKIYAFGRHDYGRLGLK 405
G L LN K+YA+G +D+G+ G
Sbjct: 3244 FYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQG-N 3302
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ +PT + L+ + IT +ACG+ S A
Sbjct: 3303 GTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 55/315 (17%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVME--RKTFAL 64
Q VF+ AV + + G V + G+ + G+LG G P V+E R T
Sbjct: 4048 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT--- 4104
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK-- 120
VV++ GG H+ C+T G++YTWG +G GR GDSE P+ V +
Sbjct: 4105 -----EVVDIAAGGAHSACITAAGELYTWG---KGRYGRLGHGDSEDQLKPKLVEALQGY 4156
Query: 121 KAVQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVK 176
+ + I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+ K
Sbjct: 4157 RVIDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGVGVTK 4214
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHI 235
+ G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4215 VECGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKV 4264
Query: 236 DDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKF 293
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4265 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKI 4316
Query: 294 TMLASGQHHSLALNS 308
+A G H+LA ++
Sbjct: 4317 NRVACGSAHTLAWST 4331
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 142/308 (46%), Gaps = 39/308 (12%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L+ ++++WGC D G LG GD+ + P+ V+
Sbjct: 494 NIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLG---HGDTVSLEEPKLVSALSGKQTG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K+ + I+ G ++S A+ DG +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 551 KQVIHIACGSTYSAAITADGELYTWG--RGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E L+ I
Sbjct: 609 SCGSGDAQTLSVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIEK----LQDLDI 659
Query: 236 DDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V G ++ I+ G + ++G + +LG E + P ++ L KK
Sbjct: 660 VKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKIMNGLQGKKVV 712
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A G H LAL G++Y++G +D + +++PV P+ +P L K I I+CG
Sbjct: 713 DVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAKPV--PSVLPGLDSKHIVGISCGP 770
Query: 354 CVSFAIDS 361
SFA S
Sbjct: 771 AQSFAWSS 778
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ +E
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTAE 3014
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V P I +L + + +A +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHS---------------- 3058
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3059 --------GGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3109
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3110 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3167
Query: 490 VILA 493
LA
Sbjct: 3168 QTLA 3171
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 153/353 (43%), Gaps = 58/353 (16%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
T G V CG+ G+LGLG + R+ AL + V V GG H LT DGK
Sbjct: 3012 TAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGK 3071
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V++WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG--- 3128
Query: 149 DSHGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQ 201
G G G G T LK + V ++++A G+ + LT G + + G +
Sbjct: 3129 --LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 202 GQLGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI- 253
G+LGR I Q N + + +E G + + +GV T+ +K +
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNG-QAVCQIECG----AQFSLALTKSGVVWTWXXTKHCLA 3241
Query: 254 LAFGLNNY-SQLGEADSEVQ-----KSGNTC--FFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ F NY +L V+ + TC +F ++IK + K
Sbjct: 3242 VXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISK-------------- 3287
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
K+YA+G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3288 -----KVYAWGDNDHGQQG-NGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 16/122 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G ++ +T+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-IVKVRCGSQFSIAITK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAW 144
DG+VY+WG D LG E + P+ +N KK V ++ G +H +AL E G VY+W
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRY-PKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSW 733
Query: 145 GS 146
GS
Sbjct: 734 GS 735
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 128/305 (41%), Gaps = 41/305 (13%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2956 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3010
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + N K V + +G H+ AL DG
Sbjct: 3011 VTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDG 3070
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H +TS G L T G
Sbjct: 3071 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3129 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQAVCQIECGAQFSLALTKSG 3228
Query: 311 KIYAF 315
++ +
Sbjct: 3229 VVWTW 3233
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G ++ LV L VV+V G T+ +TE+G+
Sbjct: 567 TADGELYTWGRGNYGRLGHGSS-EDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+A+ +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DIVKVRCGSQFSIAITKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ + +G E + P + + G +V +A G+ H + LT G + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ- 740
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R A+ S L PG L KHI + G +F S S + GL
Sbjct: 741 ----HFDTLRIAKPVPSVL-PG---LDSKHIVGISCGPAQSFAWSSCSEWSIGLR 787
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 182/422 (43%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3590 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3648
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + +P LES+ + V + SG H + L+S G + + G E
Sbjct: 3649 -YGAGGRLGIGGTESV-SSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3706
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG ++ R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3707 GKLGHGSRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 3758
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 3759 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3811
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ PT I SL + + CG+ S A+ G +Y WG G
Sbjct: 3812 YGKLG-RGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3862
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3863 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 3903
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 3904 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 3958
Query: 497 PN 498
P
Sbjct: 3959 PT 3960
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 177/412 (42%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2598 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2655
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V + SG H LT G + + G +
Sbjct: 2656 EATNGRLGLGLSS-GTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2714
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 2715 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2765
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 2766 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2818
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2819 DFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2870
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2871 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2910
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 2911 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 2960
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 167 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 225
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 226 EPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 285
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 286 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 344
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 345 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 402
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 403 VAAGSTHCLALTE 415
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2649 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 2708
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 2709 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 2763
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2764 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2823
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR + Q N +G+ +E G ++ ++ G + +G
Sbjct: 2824 GRGGSEGCNVPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2868
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2869 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2920
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2921 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 154/350 (44%), Gaps = 59/350 (16%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L G VY D+ ++G + IVKIA+ +D
Sbjct: 144 QIACAEKRFLILSRSGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 193
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG T A S + G KH+ +
Sbjct: 194 HHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAG------KHVVHIAC 247
Query: 241 G-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA-- 297
G Y+ I+++G + +G NY +LG SE + P L+ L K +A
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAGLKGLKVIDVACG 300
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
SG +LA+ G+++++G DYG+LG + S+ P I LQD + + CG+ S
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEGKI 391
A+ +G +Y WG G+ +LG+G E+ + L + ++
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 419
Query: 392 YAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+++G +D + V++P EP +P L K I IACG SFA S
Sbjct: 420 HSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAWSS 467
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3588 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3646
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3647 TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3706
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3707 --GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 3761
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 3762 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3814
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3815 LGRGGSDGCK-------VPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3867
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3868 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 3922
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 3923 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 173/424 (40%), Gaps = 63/424 (14%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2590 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2644
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2645 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDG 2704
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 2705 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2762
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSI 253
E G+LG + L+P V + H + V G + ++ +G +
Sbjct: 2763 LGEYGRLGHGDNTTQ----------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 2812
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G ++ +LG SE C P I+ L+ + + G SLAL G ++
Sbjct: 2813 FSWGDGDFGKLGRGGSE------GC-NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2865
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G+ DY RLG V +P + L+ K I +A G A+ G +Y WG +
Sbjct: 2866 TWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2924
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
Q GNG + +PT + L+ + IT +ACG+
Sbjct: 2925 GQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVACGSS 2957
Query: 434 VSFA 437
S A
Sbjct: 2958 HSVA 2961
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 41/309 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALG-------REAEGDSEFIPQTVNLPK 120
N+V++ G H + L G+VY+WGC D G LG E + S F + K
Sbjct: 183 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAG--K 240
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VK 176
V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 241 HVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 298
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
SG + +T G + + G + G+LGR + + +E K + +D
Sbjct: 299 CGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDLD 347
Query: 237 DVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 348 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKKV 400
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G H LAL + +++++G +D + V++P EP +P L K I IACG
Sbjct: 401 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACG 458
Query: 353 NCVSFAIDS 361
SFA S
Sbjct: 459 PAQSFAWSS 467
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 177/391 (45%), Gaps = 77/391 (19%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 3696 GEVYSWGEAEDGKLGHGSRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 3749
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 3750 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 3806
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 3807 WGD--GDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3864
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 3865 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3914
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++ A
Sbjct: 3915 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPTSA---- 3962
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITS-------------IACGNCVSFAIDSEGVL 365
G+L P P LQ+ IT+ + C C+ D EG L
Sbjct: 3963 --GKL-------PAQVPMECNHLQEIPITALRNRLLLLHHISELFC-PCIPM-FDLEGWL 4011
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
G+G +G IL S+GK AF +
Sbjct: 4012 DETGLGPS--VGFDALRGILISQGKEAAFRK 4040
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2596 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2648
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2649 GKVYACGEATNGRLGLGLSSGTV----PIP----RQITALS-----SYMVKKVAVHSG-- 2693
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 2694 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 2743
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 2744 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 2801
Query: 490 VILA 493
LA
Sbjct: 2802 QTLA 2805
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 310 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 363
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 364 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423
Query: 146 S 146
S
Sbjct: 424 S 424
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 256 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 314
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 315 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 371
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 372 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 430
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 431 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 476
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 14/184 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDV-MER----KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
G V + G GD G+LG G V +E F+ + +VV + G ++ +T +G++Y
Sbjct: 203 GEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELY 262
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
TWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 263 TWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD- 320
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G KTP +E + +VK+ G+ + LT G + + G + +LG
Sbjct: 321 -GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 379
Query: 206 RITQ 209
T+
Sbjct: 380 HGTE 383
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 3851 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 3909
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 3910 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
C T V + G GD G+LG G P ++ T VV+V G +V L
Sbjct: 3797 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGL------GVVKVECGSQFSVAL 3850
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYA 143
T+ G VYTWG D LG ++ Q L KK + I+ G H V EDG VY
Sbjct: 3851 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 3910
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
WG + G +G + P + ++ G + ++A G+ H + ++
Sbjct: 3911 WGD--NDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 3956
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 181/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 1769 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTAEGKVYACG 1826
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 1827 EATNGRLGLGLSS-GTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1885
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + ++GL
Sbjct: 1886 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 1936
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P L+K L + +A G +LAL EG ++++G
Sbjct: 1937 YGRLGHGD-------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 1989
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 1990 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2041
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2042 -------------------DYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 2081
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G ++ WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 2082 TETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 2131
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 179/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 2763 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 2821
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G L + G E
Sbjct: 2822 -YGAGGRLGIGGTESV-STPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 2879
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 2880 GKLGHGNRSPCDRP--RVIESLRGVEV------VDIAAGGAHSACITASGELYTWGKGRY 2931
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 2932 GRLGHGDSEDQ-------LKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 2984
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 2985 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3035
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3036 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 3076
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 3077 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 3131
Query: 497 PN 498
P
Sbjct: 3132 PT 3133
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 49/345 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
T G V CG+ G+LGLG + R+ AL + V V GG H + LT DGK
Sbjct: 1817 TAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGK 1876
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
V++WG D+G LG + + + L K ++ I+ G SHS A+ G +Y+WG
Sbjct: 1877 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL-- 1934
Query: 149 DSHGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQ 201
G G G G T L+ + V +V++A G+ + LT G + + G +
Sbjct: 1935 ---GEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 1991
Query: 202 GQLGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
G+LGR I Q N +G+ +E G ++ ++ G +
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVW 2036
Query: 255 AFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G +Y +LG D V+K P +++ L KK +A G H LA+ G+++
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRK--------PQMVEGLRGKKIVHVAVGALHCLAVTETGQVF 2088
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
A+G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2089 AWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 34/243 (13%)
Query: 282 PHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P I +LS+ +A SG H++AL +GK++++G D G+LG + +P I
Sbjct: 1845 PRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIE 1903
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-------------------- 379
+L+ K I IACG+ S AI S G LY WG+G +LG+G
Sbjct: 1904 ALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVV 1963
Query: 380 --------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ L EG ++++G D+G+LG + SE P I L + + I CG
Sbjct: 1964 QVACGSRDAQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECG 2022
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S A+ GV++ WG G+ ++LG+G + + +P +EG L ++ VA G H +
Sbjct: 2023 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRGKKIVHVAVGALHCLA 2080
Query: 492 LAK 494
+ +
Sbjct: 2081 VTE 2083
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 178/435 (40%), Gaps = 69/435 (15%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVV 75
S+K E+ T++ K V G D QLG L ++ +F+ NVV+V
Sbjct: 1753 SRKRLSGLESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 1807
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSH 131
G +T +GKVY G G LG + IP+ + N K V + +G H
Sbjct: 1808 GGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRH 1867
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
++AL DG V++WG D G +G P +E++ I IA G+ H +TS
Sbjct: 1868 AMALTVDGKVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS 1925
Query: 190 RGNLLTAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT 245
G L + G E G+LG TQ L P V + H + V G +
Sbjct: 1926 SGELYSWGLGEYGRLGHGDNTTQ-------------LRPKLVKVLLGHRVVQVACGSRDA 1972
Query: 246 ---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ +G + ++G ++ +LG SE C P I+ L+ + + G
Sbjct: 1973 QTLALTDEGMVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQF 2025
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
SLAL G ++ +G+ DY RLG V +P + L+ K I +A G A+
Sbjct: 2026 SLALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTET 2084
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G ++ WG + Q GNG + +PT + L+
Sbjct: 2085 GQVFAWGDNDHGQQGNG---------------------------TTTVNRKPTLVQGLEG 2117
Query: 423 KTITSIACGNCVSFA 437
+ IT +ACG+ S A
Sbjct: 2118 QKITRVACGSSHSVA 2132
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 172/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 2761 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA 2819
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ + V +++G H +AL +G +Y+WG D
Sbjct: 2820 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 2879
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V IA+G H +T+ G L T G +G+ GR+
Sbjct: 2880 --GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWG---KGRYGRL 2934
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ + ++G +Y +
Sbjct: 2935 GHGDSEDQ-------LKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 2987
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 2988 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3040
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3041 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 3095
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 3096 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 152/310 (49%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G + + G+ + G+LG G P V+E + VE VV++ GG H+ C+T G+
Sbjct: 2869 GELYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGVE----VVDIAAGGAHSACITASGE 2922
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR GDSE P+ V + + + ++ +GD+ ++ L +D V++
Sbjct: 2923 LYTWG---KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWS 2979
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 2980 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3037
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 3038 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3087
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE-----GKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++ GK+
Sbjct: 3088 DEGQLGDGTTNAIQR--------PRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLP 3139
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 3140 AQVPMEYNHL 3149
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ +E
Sbjct: 1767 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTAE 1819
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S + P I +L + + +A G + A+ +G ++
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1879
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 1880 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 1912
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L P + K L + V+QVA G +
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLV--KVLLGHRVVQVACGSR 1970
Query: 488 HSVILA 493
+ LA
Sbjct: 1971 DAQTLA 1976
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 3024 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 3082
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 3083 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 35/275 (12%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
++S G + A G Y++ G N TP L++ L++ + SG H LAL
Sbjct: 3592 VTSYGKVYASG---YTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLAL 3648
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++ G++YA+G D G+LGL N ++P + SL DK I IACG S AI G LY
Sbjct: 3649 STTGEVYAWGDGDDGKLGLGNRVTH-SKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLY 3707
Query: 367 GWGMGNGYQLGNGKEDDIL----------------------------NSEGKIYAFGRHD 398
WG G +LG+G +D L S+ ++++G D
Sbjct: 3708 TWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGD 3767
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
YG+LG N+SE P I SL K I I CG+ S A+ + G LY WG G+ ++LG+G
Sbjct: 3768 YGKLG-HNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHG 3826
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ + +P + G L ++Q ++G H + L
Sbjct: 3827 SSEHVRKPKPVSG--LQGKKIVQFSTGSLHVLALT 3859
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 181/392 (46%), Gaps = 64/392 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWG 145
VY WG N G L A DS + + + K Q+ G+ A+ G VYA G
Sbjct: 3546 VYVWGHNHRGQL---ACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASG 3602
Query: 146 SFRDSHGSMGLKGEGIQK----TPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCP 199
+ +S G +G+ + TP ++ ++ I+K+A SG H + L++ G + G
Sbjct: 3603 -YTES-GRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDG 3660
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFG 257
+ G+LG + + S+ P V L K I D+ G ++ IS G + +G
Sbjct: 3661 DDGKLGLGNRVTHSK----------PQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWG 3710
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAF 315
Y +LG D E + P L++ L + +A SG ++ + S+ ++++
Sbjct: 3711 KGRYGRLGHGDYED-------YLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSW 3763
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G DYG+LG N+SE P I SL K I I CG+ S A+ + G LY WG G+ ++
Sbjct: 3764 GDGDYGKLG-HNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFR 3822
Query: 376 LGNGKEDDI--------------------------LNSEGKIYAFGRHDYGRLGLKNVSE 409
LG+G + + L +G++YA+G +D G+LG +
Sbjct: 3823 LGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG-DGTAH 3881
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
P+ P PI +L+ K I ++CG+ SFA SE
Sbjct: 3882 PIARPRPIAALKGKRIQQVSCGSAHSFAWASE 3913
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 168/352 (47%), Gaps = 44/352 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK---TFALVEDLDNVVEVVV--GGMHTVC 83
T+ T G V G ++G+LG+GP + T LV+ L+N+++V V GG H +
Sbjct: 3588 TMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLA 3647
Query: 84 LTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGT 140
L+ G+VY WG D+G LG R + + + K + I+ G HS A+ G
Sbjct: 3648 LSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSD--KCIIDIACGGFHSAAISRYGH 3705
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIA--SGADHFVMLTSRGNL 193
+Y WG G G G G + L + V G +VK+A SG + +TS N+
Sbjct: 3706 LYTWGK-----GRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNV 3760
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKG 251
+ G + G+LG S P ++ L K I + G ++ +S+ G
Sbjct: 3761 WSWGDGDYGKLGHNISESCKL----------PCKIESLSGKGIIQIDCGSQFSVALSANG 3810
Query: 252 SILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
++ +G +Y +LG SE V+K P + L KK ++G H LAL +G
Sbjct: 3811 TLYTWGKGDYFRLGHGSSEHVRK--------PKPVSGLQGKKIVQFSTGSLHVLALTDDG 3862
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++YA+G +D G+LG + P+ P PI +L+ K I ++CG+ SFA SE
Sbjct: 3863 EVYAWGDNDEGQLG-DGTAHPIARPRPIAALKGKRIQQVSCGSAHSFAWASE 3913
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 207/497 (41%), Gaps = 89/497 (17%)
Query: 51 GLGPDVMERKTFALVEDLDNVV-------------EVVVGGMHTVCLTEDGKVYTWGCND 97
G+ ++ME ++ LD V E+++ C+ K+ N
Sbjct: 2501 GVCFNMMEEVNRVIINSLDRTVQLLNSVNKCHKCIEIIMRTNEKTCIITGLKIDVMIINQ 2560
Query: 98 E---GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
E + + + EF PQ P+ +I ++V Y WG D
Sbjct: 2561 EFVSNSSTPQFDAVQEFPPQ----PEVESKIRVDSEYAV--------YVWG-LNDKGQLG 2607
Query: 155 GLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
GL G +++ P E+++ + ++I G+ ++++ G + G G+LG
Sbjct: 2608 GLNGSKVKR-PTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKV 2666
Query: 213 SRNARRGMSFLEPGEVP-LKRKHIDDVFT---GVYNTFISSKGSILAFGLNNYSQLGEAD 268
S P ++P L + I V G + +S G +L++G +LG D
Sbjct: 2667 S----------SPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGD 2716
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
TP LI SL K+ +A G HS A+ S+G++Y +G+ YGRLG
Sbjct: 2717 I-------LTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGH--- 2766
Query: 329 SEPVTEPTP--IPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
S+ V++ TP + K IT +ACG + + A+DSEG +Y WG G+ +LG G D
Sbjct: 2767 SDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGC 2826
Query: 385 --------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
L + G+++ +G+ +Y RLGL E V PT +
Sbjct: 2827 CTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGR-GEHVRRPTLVN 2885
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
L+ TI IA G A+ ++G +Y WG + Q GNG + EP + NN
Sbjct: 2886 QLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTN--FNNIK 2943
Query: 479 VLQVASGGQHSVILAKP 495
+ +V G S+ P
Sbjct: 2944 INRVGCGSSQSIAWKCP 2960
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 163/359 (45%), Gaps = 46/359 (12%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V G D GQLG L ++R TF +E+V G ++ +GKV+ G +
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSS 2654
Query: 98 EGALG----------REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G LG R+ G S+F+ +T V + +G H++AL DG V +WG
Sbjct: 2655 GGRLGIPFCGKVSSPRQIPGLSQFVIKT-------VAVHSGGKHAMALSLDGKVLSWGDG 2707
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
D G +G TP ++S+ + IA G+ H +TS G L T G QGQ G
Sbjct: 2708 ED--GKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWG---QGQYG 2762
Query: 206 RI--TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT---FISSKGSILAFGLNN 260
R+ + + + F+ K+I V G + + S+G++ ++G +
Sbjct: 2763 RLGHSDEVSQHTPKLVKEFV--------GKNITQVACGSRDAQTLALDSEGNVYSWGDGD 2814
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+ +LG S+ C TP ++ L + + G S+AL + G+++ +G+ +Y
Sbjct: 2815 FGKLGRGGSD-----GCC--TPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEY 2867
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
RLGL E V PT + L+ TI IA G A+ ++G +Y WG + Q GNG
Sbjct: 2868 YRLGLGR-GEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNG 2925
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 31/279 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+ G G+ G+LG G D++ T L++ L V + G H+ +T DG++YTWG
Sbjct: 2699 GKVLSWGDGEDGKLGHG-DILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWG 2757
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAG--DSHSVALLEDGTVYAWGSFRDS 150
G LG E S+ P+ V + K Q++ G D+ ++AL +G VY+WG
Sbjct: 2758 QGQYGRLGHSDEV-SQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGD--GD 2814
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +G G TP K+E + G +V+I GA V LT+ G + T G E +LG
Sbjct: 2815 FGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLG--- 2871
Query: 209 QRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
RG P V LK ID + G + +S++G + +G N++ Q G
Sbjct: 2872 -------LGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGN 2924
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+ + P L+ + ++ K + G S+A
Sbjct: 2925 GTTNANQE-------PRLVTNFNNIKINRVGCGSSQSIA 2956
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 39/282 (13%)
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDG 139
+ +T+ G+VY+WG N+ GALG + S P+ + K V +S G A+ EDG
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAG 197
+Y WG L TP ++S+S + K++ G+ S N T
Sbjct: 565 KLYMWGKI--------LHSSNCCYTPELVKSISEWHVSKVSCGS-------SINN--TLA 607
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
+G + R++ R + P + + + N I ++ +G
Sbjct: 608 LSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWG 667
Query: 258 LNNYSQLGEADS-EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
N + LG +S V + P +K LS K+ T L+ + LAL G++Y +G
Sbjct: 668 RGNNNMLGHNNSFRVNR--------PKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ D +E T+ P+ L ++ + IAC FA
Sbjct: 720 QLD---------NENTTQCRPVKCLMNRQVKKIACSPNQCFA 752
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 52/257 (20%)
Query: 228 VPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
VP+K DV+ Y ++ KG + ++G+N + LG QK + F TP I +
Sbjct: 492 VPMKSV---DVYDETY-LAVTQKGEVYSWGVNEFGALGHG----QKYSS--FPTPEPIVA 541
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
S M++ G+ A+ +GK+Y +G+ + + S P + S+ + ++
Sbjct: 542 FSKLIVVMVSCGKDFCAAVTEDGKLYMWGK-------ILHSSNCCYTPELVKSISEWHVS 594
Query: 348 SIACGNCV--SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
++CG+ + + A+ EG ++ + N G +D LN + F
Sbjct: 595 KVSCGSSINNTLALSREGYVFSFEYRNS---DRGCDDKSLNVIPSMIVF----------- 640
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
D I SI C N V+ ID ++ WG GN LG+ +
Sbjct: 641 ----------------DYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNR 684
Query: 466 PMKIE---GKQLNNYTV 479
P +++ GKQ+ + ++
Sbjct: 685 PKEVKFLSGKQVTSLSL 701
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ--HHSLALNSEGKIYAFGRHDYGRLGLKN 327
++ S N C+ TP L+KS+S+ + ++ G +++LAL+ EG +++F + R G +
Sbjct: 571 KILHSSNCCY-TPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSFEYRNSDR-GCDD 628
Query: 328 VSEPVTEPTPIPSLQ--DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
S V IPS+ D I SI C N V+ ID ++ WG GN LG+
Sbjct: 629 KSLNV-----IPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGH------- 676
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
N S V P + L K +TS++ + A+ G +Y
Sbjct: 677 --------------------NNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVY 716
Query: 446 GWG 448
WG
Sbjct: 717 CWG 719
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
+ G + T G+GD +LG G RK V L +V+ G +H + LT+DG+VY
Sbjct: 3807 SANGTLYTWGKGDYFRLGHGSSEHVRKP-KPVSGLQGKKIVQFSTGSLHVLALTDDGEVY 3865
Query: 92 TWGCNDEGALGR-EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG NDEG LG A + P K+ Q+S G +HS +AW S
Sbjct: 3866 AWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHS---------FAWASEEAC 3916
Query: 151 H 151
H
Sbjct: 3917 H 3917
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 124/327 (37%), Gaps = 65/327 (19%)
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
Q +N+P K+V + D +A+ + G VY+WG + G++G G+ P E +
Sbjct: 488 QMMNVPMKSVDVY--DETYLAVTQKGEVYSWGV--NEFGALG-HGQKYSSFPTP-EPIVA 541
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
K+ V++ S G A E G+L + S N ++ +
Sbjct: 542 FSKL------IVVMVSCGKDFCAAVTEDGKLYMWGKILHSSNCCYTPELVKS----ISEW 591
Query: 234 HIDDVFTG--VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
H+ V G + NT +S +G + +F N S G D KS N P +I + D
Sbjct: 592 HVSKVSCGSSINNTLALSREGYVFSFEYRN-SDRGCDD----KSLNV---IPSMI--VFD 641
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ + + ++ ++ +GR + LG N S V P + L K +TS++
Sbjct: 642 YEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNN-SFRVNRPKEVKFLSGKQVTSLS 700
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
+ A+ G +Y WG QL N E
Sbjct: 701 LADDYILALTDTGQVYCWG-----QLDN------------------------------EN 725
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFA 437
T+ P+ L ++ + IAC FA
Sbjct: 726 TTQCRPVKCLMNRQVKKIACSPNQCFA 752
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 375 QLGNGKEDDILNSEG----KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
Q N K DD + G +Y +G + G+L + S+ V +P SL T +
Sbjct: 3526 QWLNSKPDDWNMTWGGNGQVVYVWGHNHRGQLACMDSSQ-VKKPLACDSLSVLKPTQVIG 3584
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG----NGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
G FA+ S G +Y G +LG N K ++ P ++G LNN + V SGG
Sbjct: 3585 GEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQG--LNNIIKVAVNSGG 3642
Query: 487 QHSVILA 493
+H + L+
Sbjct: 3643 RHCLALS 3649
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 1604 -YGAGGRLGIGGTESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 1661
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 1662 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 1713
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 1714 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 1766
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 1767 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 1817
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 1818 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 1858
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 1859 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 1913
Query: 497 P 497
P
Sbjct: 1914 P 1914
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 553 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 610
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 611 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 670 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 720
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 721 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 773
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 774 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 825
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 826 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 865
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 866 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 915
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 663
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 664 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 718
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 719 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 778
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 779 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 823
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 824 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 875
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 876 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 916
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 1543 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 1601
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 1602 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 1661
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 1662 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 1716
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 1717 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 1769
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 1770 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 1822
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 1823 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 1877
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 1878 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1908
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 173/424 (40%), Gaps = 63/424 (14%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 545 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 599
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 600 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 659
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 660 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 717
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSI 253
E G+LG + L+P V + H + V G + ++ +G +
Sbjct: 718 LGEYGRLGHGDNTTQ----------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 767
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G ++ +LG SE C P I+ L+ + + G SLAL G ++
Sbjct: 768 FSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSGVVW 820
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G+ DY RLG V +P + L+ K I +A G A+ G +Y WG +
Sbjct: 821 TWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 879
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
Q GNG + +PT + L+ + IT +ACG+
Sbjct: 880 GQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVACGSS 912
Query: 434 VSFA 437
S A
Sbjct: 913 HSVA 916
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 1651 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 1704
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 1705 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 1761
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 1762 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1819
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 1820 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 1869
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 1870 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 1921
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 1922 AQVPMEYNHL 1931
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 551 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 603
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 604 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 648
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 649 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 698
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 699 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 756
Query: 490 VILA 493
LA
Sbjct: 757 QTLA 760
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 1806 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 1864
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 1865 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1908
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 40/337 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G+V + G+G+ GQLGLG D ++ LV+ L + VV+V G HTV L+EDG VYTWG
Sbjct: 7 GLVYSWGRGEDGQLGLG-DTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
D+G LG G +++P+ V ++ VQ + G H+ A+ + G +Y WG +G
Sbjct: 66 RGDDGRLGHGDNG-WKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGG--GMYG 122
Query: 153 SMGLKGEGIQKTPLKLESV----SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G E TP ++ + + + +IA G+ H V+LT G + T G E G +G
Sbjct: 123 KLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHT- 181
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGSILAFGLNNYSQLGEA 267
NA G +L L+ K + V G + +++ G I +G + +LG
Sbjct: 182 ------NA-DGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHG 234
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-----------NSEGKIYAFG 316
Q P ++++L K+ +A G HS A+ G++Y FG
Sbjct: 235 MERNQ-------MVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFG 287
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
D+G+LG +V + V+ PT + L + +A N
Sbjct: 288 NGDHGKLGHGDVRK-VSVPTLVAGLVKMHVVKVASYN 323
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAWG 145
G VY+WG ++G LG D + P V+ K VQ++ G H+V L EDG VY WG
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDR-PVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
R G +G G + P +E++ G IV+ G+ H +T +G L T G G+
Sbjct: 66 --RGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
LG G P P KH+ D V S+ +++ L
Sbjct: 124 LGH------------GNESGHP--TPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYT 169
Query: 264 LGEADSEV--QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
G+ ++ V + + + P +++SL K T +A+ H+ AL + G+I+ +G +G
Sbjct: 170 WGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFG 229
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
RLG + P + +L K + +ACG S AI G LY WG G
Sbjct: 230 RLG-HGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGE--------- 279
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
G++Y FG D+G+LG +V + V+ PT + L + +A N
Sbjct: 280 ------HGQVYTFGNGDHGKLGHGDVRK-VSVPTLVAGLVKMHVVKVASYN 323
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 167/371 (45%), Gaps = 63/371 (16%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTA 196
G VY+WG R G +GL Q P+ ++++ G+V++A G+ H V+L+ G + T
Sbjct: 7 GLVYSWG--RGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + G+LG + G ++ L+ + I G Y+T ++ KG +
Sbjct: 65 GRGDDGRLG---------HGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYT 115
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK--KFTMLASGQHHSLALNSEGKIY 313
+G Y +LG + +SG+ TP ++K L D+ + T +A G H++ L GK+Y
Sbjct: 116 WGGGMYGKLGHGN----ESGHP---TPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVY 168
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G + G +G N P + SLQ KT+T +A + A+ + G ++ WG
Sbjct: 169 TWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWG---- 224
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
EGK +GRLG + P + +L K + +ACG
Sbjct: 225 --------------EGK--------FGRLG-HGMERNQMVPRMVEALMGKRVGHVACGGF 261
Query: 434 VSFAIDSEGVLYGWG---------MGNGY--QLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
S AI G LY WG GNG +LG+G + P + G L V++V
Sbjct: 262 HSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAG--LVKMHVVKV 319
Query: 483 ASGGQHSVILA 493
AS +H+ LA
Sbjct: 320 ASYNEHTAALA 330
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFA--LVEDL--DNVVEVVVGGMHTVCLTEDGK 89
T G + T G+G G+LG G MER +VE L V V GG H+ + + G+
Sbjct: 215 TAAGEIFTWGEGKFGRLGHG---MERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGE 271
Query: 90 VYTWGCNDEGAL--------GREAEGDSE--FIPQTVN--LPKKAVQISAGDSHSVAL 135
+YTWG + G + G+ GD +P V + V++++ + H+ AL
Sbjct: 272 LYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 172/357 (48%), Gaps = 33/357 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERK------TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+L G GQLG G + TF+L V EV GG HT+ L EDG+VY+
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLA---TCVKEVACGGKHTLFLMEDGQVYS 57
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G N EG LG EG + P + I+ G SHS+AL G +Y+WG+ D G
Sbjct: 58 CGWNGEGQLGHSHEG-THPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGND--G 114
Query: 153 SMGLKG-EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G E + P ++ +S I +++ G DH + L G L T G GQLG +
Sbjct: 115 QLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLG-LGN 173
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
S+++ + + LE +PL + V G ++F +S G++ +G N+ QLG D
Sbjct: 174 GFISQSSPQKVKSLEG--IPLAQ-----VTAGGSHSFALSLSGAVFGWGKNSAGQLGLND 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+V++ TP +K L K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EQVKE-------TPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSL 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ P + L ++ IACG + A + S G LY +G G+ QLG G E+++
Sbjct: 280 HNEIN-PRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNV 335
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 146/328 (44%), Gaps = 48/328 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
+ ++A G H + L G + + G +GQLG + + P V L
Sbjct: 36 VKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGT------------HPAPVATLAE 83
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+HI + G ++ +S +G++ ++G N QLG A E P +IK LS +
Sbjct: 84 EHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSR------IPRIIKKLSQQ 137
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K ++ G H LAL +G+++ +G++ +G+LGL N + P + SL+ + +
Sbjct: 138 KIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTA 197
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKED--------------------------DIL 385
G SFA+ G ++GWG + QLG E IL
Sbjct: 198 GGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAIL 257
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVL 444
G ++ FG G+LG ++ + P + L ++ IACG + A + S G L
Sbjct: 258 TKAGGLFTFGAGGSGQLGHDSLHNEIN-PRRVLELMGSEVSQIACGRKHTLAFVPSSGTL 316
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGK 472
Y +G G+ QLG G E+++ P ++GK
Sbjct: 317 YAFGCGDLGQLGTGHENNVKCPTVVKGK 344
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 37/242 (15%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+L +G + + QLG S C T L + + +A G H+L L +G++
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKE-----VACGGKHTLFLMEDGQV 55
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
Y+ G + G+LG S T P P+ +L ++ I IACG S A+ +G LY WG GN
Sbjct: 56 YSCGWNGEGQLGH---SHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGN 112
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
QLG+ + Y R+ P I L + I ++CG+
Sbjct: 113 DGQLGHATVEH---------------YSRI-----------PRIIKKLSQQKIQQMSCGD 146
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
A+ +G L+ WG QLG G P K+ K L + QV +GG HS
Sbjct: 147 DHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKV--KSLEGIPLAQVTAGGSHSFA 204
Query: 492 LA 493
L+
Sbjct: 205 LS 206
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWG 94
G + T GQ GQLGLG + + + V+ L+ + +V GG H+ L+ G V+ WG
Sbjct: 156 GQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWG 215
Query: 95 CNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
N G LG E E L K V IS G+ H+ L + G ++ +G+ G
Sbjct: 216 KNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGA--GGSGQ 273
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADH-FVMLTSRGNLLTAGCPEQGQLG 205
+G + P ++ + G + +IA G H + S G L GC + GQLG
Sbjct: 274 LGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 179/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3940 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3998
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3999 -YGAGGRLGIGGTESV-STPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4056
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4057 GKLGHGNRSPCDRP--RVIESLRGVEV------VDIAAGGAHSACITASGELFTWGKGRY 4108
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+ +L + +A SG +L L + ++++G D
Sbjct: 4109 GRLGHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4161
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL +T + CG+ S A+ G +Y WG G
Sbjct: 4162 YGKLG-RGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKG-------- 4212
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4213 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4253
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4254 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4308
Query: 497 PN 498
P
Sbjct: 4309 PT 4310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 181/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G +YA G
Sbjct: 2946 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKIYACG 3003
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 3004 EATNGRLGLGLSS-GTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3062
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + ++GL
Sbjct: 3063 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3113
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D+ Q P L+K L + +A G +LAL EG ++++G
Sbjct: 3114 YGRLGHGDNATQ-------LRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3166
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3167 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3218
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3219 -------------------DYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3258
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3259 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3308
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 40/248 (16%)
Query: 280 FTPHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P LI SLS +K LA+ GQH+ LAL+S G+++++G D GRLG + + + EPT
Sbjct: 468 LAPMLIHSLSSRKIVKLAAHPDGQHY-LALSSNGEVFSWGCGDGGRLGHGDATY-LEEPT 525
Query: 337 PIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
I + K + IACG+ S I +G LY WG GN +LG+G +D
Sbjct: 526 MIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTA 585
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ G+++++G DYG+LG + S+ P + LQD
Sbjct: 586 LKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLD 644
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I + CG+ S A+ +G +Y WG G+ +LG+G ++ + P ++ L V+ VA
Sbjct: 645 IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLD--TLQGKKVVDVAV 702
Query: 485 GGQHSVIL 492
G H + L
Sbjct: 703 GSTHCLAL 710
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 159/339 (46%), Gaps = 43/339 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G + CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3056
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y+WG +
Sbjct: 3057 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG--LGEY 3114
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGR- 206
G +G Q P ++ + G ++++A G+ + LT G + + G + G+LGR
Sbjct: 3115 GRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3174
Query: 207 ------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
I Q N +G+ +E G ++ ++ G + +G +
Sbjct: 3175 GSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWGKGD 3219
Query: 261 YSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G +D
Sbjct: 3220 YFRLGHGTDVHVRK--------PQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3271
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3272 HGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3309
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 173/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3938 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA 3996
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ + V +++G H +AL +G VY+WG D
Sbjct: 3997 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4056
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V IA+G H +T+ G L T G +G+ GR+
Sbjct: 4057 --GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG---KGRYGRL 4111
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ + ++G +Y +
Sbjct: 4112 GHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4164
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ T + G S+AL G +Y +G+ DY RL
Sbjct: 4165 LGRGGSDGCK-------IPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRL 4217
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4218 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4272
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4273 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 160/333 (48%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + VE
Sbjct: 4023 QHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGVE 4080
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G+++TWG +G GR GDSE P+ V+ + +
Sbjct: 4081 ----VVDIAAGGAHSACITASGELFTWG---KGRYGRLGHGDSEDQLKPKLVDALQGHRV 4133
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ ++ +GD+ ++ L +D V++WG +G +G G K P+K++S++ G+ K+
Sbjct: 4134 IDVACGSGDAQTLCLTDDDMVWSWGD--GDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVE 4191
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4192 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4241
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4242 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINR 4293
Query: 296 LASGQHHSLALNSE-----GKIYAFGRHDYGRL 323
+A G H+LA ++ GK+ A +Y L
Sbjct: 4294 VACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL 4326
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 38/297 (12%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--------KKAVQISAGD 129
G H + L+ +G+V++WGC D G LG GD+ ++ + + K V I+ G
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLG---HGDATYLEEPTMIAAFNGKQAGKHVVHIACGS 546
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFV 185
++S + DG +Y WG R ++G +G Q TP+ + ++ G+ V SG +
Sbjct: 547 TYSAVITIDGELYTWG--RGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 604
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YN 244
+T G + + G + G+LGR + + +E L+ I V G ++
Sbjct: 605 AVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLVE----KLQDLDIVKVCCGSQFS 655
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ G + +G + +LG E + P L+ +L KK +A G H L
Sbjct: 656 VALTKDGQVYTWGKGDNQRLGHGTDEHVR-------FPKLLDTLQGKKVVDVAVGSTHCL 708
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
AL +G+++++G +D +L + +P +P L K I I+CG SFA S
Sbjct: 709 ALTDDGEVHSWGSND--KLQHFDTLSNKKQPKALPGL--KHIVGISCGPGQSFAWSS 761
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2944 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2996
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GKIYA G GRLGL S + P I +L + + +A G + A+ +G ++
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3056
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3057 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3089
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L P + K L + V+QVA G +
Sbjct: 3090 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLV--KVLLGHRVIQVACGSR 3147
Query: 488 HSVILA 493
+ LA
Sbjct: 3148 DAQTLA 3153
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 34/281 (12%)
Query: 120 KKAVQISAGD--SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---- 173
+K V+++A H +AL +G V++WG G +G + P + + +G
Sbjct: 479 RKIVKLAAHPDGQHYLALSSNGEVFSWGC--GDGGRLGHGDATYLEEPTMIAAFNGKQAG 536
Query: 174 --IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+V IA G+ + ++T G L T G +G GR+ S+ + LK
Sbjct: 537 KHVVHIACGSTYSAVITIDGELYTWG---RGNYGRLGHGSSEDQTTPMLV------TALK 587
Query: 232 RKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ DV G ++ G + ++G +Y +LG S+ K TP L++ L
Sbjct: 588 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK-------TPKLVEKL 640
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
D + G S+AL +G++Y +G+ D RLG E V P + +LQ K +
Sbjct: 641 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGTDEHVRFPKLLDTLQGKKVVD 699
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQ----LGNGKEDDIL 385
+A G+ A+ +G ++ WG + Q L N K+ L
Sbjct: 700 VAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKAL 740
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 16/122 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G +V LT+
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-----LQDLD-IVKVCCGSQFSVALTK 660
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAW 144
DG+VYTWG D LG + F P+ ++ KK V ++ G +H +AL +DG V++W
Sbjct: 661 DGQVYTWGKGDNQRLGHGTDEHVRF-PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 719
Query: 145 GS 146
GS
Sbjct: 720 GS 721
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTED 87
+ G V + G GD G+LG G D + ++ + +VV + G ++ +T D
Sbjct: 497 SSNGEVFSWGCGDGGRLGHG-DATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITID 555
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
G++YTWG + G LG + D + P V K K V ++ +GD+ ++A+ E+G V++
Sbjct: 556 GELYTWGRGNYGRLGHGSSED-QTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWS 614
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G KTP +E + IVK+ G+ V LT G + T G +
Sbjct: 615 WGD--GDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDN 672
Query: 202 GQLG 205
+LG
Sbjct: 673 QRLG 676
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T GVV T G+GD +LG G DV RK +VE L +V V VG +H + +T+ G+VY
Sbjct: 3207 TKSGVVWTWGKGDYFRLGHGTDVHVRKP-QMVEGLRGKKIVHVAVGALHCLAVTDTGQVY 3265
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVAL----LEDGTVYAWGS 146
WG ND G G + L +K +++ G SHSVA + +V+
Sbjct: 3266 AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPSVHEPVL 3325
Query: 147 FRDSHGSMGLKGEGIQ 162
F+ + S+G G+Q
Sbjct: 3326 FQTARDSLGASYLGVQ 3341
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V T G+GD +LG G D E F + D VV+V VG H + LT+DG+V
Sbjct: 659 TKDGQVYTWGKGDNQRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEV 716
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
++WG ND+ L ++ P+ + K V IS G S +AW S S
Sbjct: 717 HSWGSNDK--LQHFDTLSNKKQPKALPGLKHIVGISCGPGQS---------FAWSSC--S 763
Query: 151 HGSMGLKGEGIQKT-PLKLESVSGIVK-IASGAD 182
S+GL+ + P+ E + +++ ++ G D
Sbjct: 764 EWSVGLRVPFVVDVCPMTFEQLDLLLRQVSEGMD 797
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 93/412 (22%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
VY WG + G LG E ++++ PQ V + +++ A S S+AL +DG VY WG
Sbjct: 45 VYAWGYGNFGQLGLANE-NNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG-- 101
Query: 148 RDSHGSMG---LKGEGIQKTPL--KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
++ G +G + + + L KLE++ I +I+ G H ++ G L T G + G
Sbjct: 102 KNKGGILGHYDITSFNMIQPELVEKLENIQ-IKQISCGPFHMAAISQDGELYTWGNKDHG 160
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
+LG Q+ +++ V +KR + + ++GS+L
Sbjct: 161 KLGHEIQQKSNK-------------VEIKRGN---------QNYDYAEGSML-------- 190
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
P ++SL+ K ++ G ++ L G++Y+FG G+
Sbjct: 191 -------------------PTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQ 231
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG ++ +P IP LQ+ I +I CG S A+ S G
Sbjct: 232 LGYQSEETGNFQPKKIPDLQN--IINIDCGQQFSAAVSSSG------------------- 270
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
K+Y +G +D+G+LG N S P + I +I+CG+ A+ +EG
Sbjct: 271 -------KVYTWGNNDHGQLG-NNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEG 322
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
L+ WG GN QLG+ +D+ P +IE K+ +++V GG H+ L +
Sbjct: 323 KLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE----KIIKVDCGGTHTAFLTQ 370
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 188/434 (43%), Gaps = 85/434 (19%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGC 95
V G G+ GQLGL + + + VE L N+++V ++ L++DGKVYTWG
Sbjct: 44 TVYAWGYGNFGQLGLANE-NNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGK 102
Query: 96 NDEGALGREAEG-----DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
N G LG E + + N+ K QIS G H A+ +DG +Y WG+
Sbjct: 103 NKGGILGHYDITSFNMIQPELVEKLENIQIK--QISCGPFHMAAISQDGELYTWGN--KD 158
Query: 151 HGSMGLKGEGIQKT--------------------PLKLESVSGI--VKIASGADHFVMLT 188
HG +G E QK+ P K++S++GI +++ G V+LT
Sbjct: 159 HGKLG--HEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT 216
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
G + + G +GQLG ++ + + +P ++P + I+ ++ +S
Sbjct: 217 ENGEVYSFGNSMKGQLGYQSEETGN---------FQPKKIPDLQNIINIDCGQQFSAAVS 267
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G + +G N++ QLG S Q P+ + K ++ G + AL++
Sbjct: 268 SSGKVYTWGNNDHGQLGNNQSIYQAR-------PNQVTGFGGNKIINISCGDNFIAALSN 320
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
EGK++ +G + G+LG N ++ + P I ++K I + CG
Sbjct: 321 EGKLFTWGYGNDGQLGHSNRND-LYAPKQI-EFKEK-IIKVDCG---------------- 361
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNV-SEPVTEPTP--IPSLQDKT 424
G L ++Y FGR + G+LG+ +N+ SE TP + +
Sbjct: 362 ----------GTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMK 411
Query: 425 ITSIACGNCVSFAI 438
+ + CG + AI
Sbjct: 412 VVDVTCGGEYTLAI 425
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 6/199 (3%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G V + G GQLG + + DL N++ + G + ++ GKVYTW
Sbjct: 216 TENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINIDCGQQFSAAVSSSGKVYTW 275
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G ND G LG Q K + IS GD+ AL +G ++ WG D G
Sbjct: 276 GNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGND--G 333
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG---RITQ 209
+G P ++E I+K+ G H LT L G +GQLG I
Sbjct: 334 QLGHSNRNDLYAPKQIEFKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIES 393
Query: 210 RSASRNARRGMSFLEPGEV 228
+A R + + F + +V
Sbjct: 394 EAAIRTTPKIVEFFKKMKV 412
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 56/350 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ IA G +H V++T G L T G E GQLG + ++ RN + L+P +
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKT--RNKPTTVKALKP-------E 87
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I V G ++T ++ + +FG + LG D T P I+SL DK
Sbjct: 88 KITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDE-------TDLNMPTSIESLEDKD 140
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITSIA 350
++A G +HS A+ G++Y +G + G+LGLKN + P++ D K++ S+A
Sbjct: 141 VNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKN------DTISYPTMLDLGKSVISVA 194
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLG---------------------------NGKEDD 383
CG + + ++G LY +G G +LG G
Sbjct: 195 CGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTV 254
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L + G++Y FG G+LGL + P + +L + I IACG + + +G
Sbjct: 255 ALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGE 314
Query: 444 LYGWGMGNGYQLGNGKE--DDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
L+ +G G +LG G E ++ +P+K++ +L + VL +A GG H+++
Sbjct: 315 LFTFGDGRHGKLGQGDESFSNLFKPVKVQ--RLKEFIVLHIACGGCHTIV 362
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 198/428 (46%), Gaps = 57/428 (13%)
Query: 14 ENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLGPDVMERK-TFALV 65
+N + K ++ S+ V + C T G + T G + GQLG+G + K T
Sbjct: 24 DNRTNKFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKA 83
Query: 66 EDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQI 125
+ + V G HT+ +T+ K+Y++G EGALG E D +L K V I
Sbjct: 84 LKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNI 143
Query: 126 SA-GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
A G HS A+ ++G +Y WGS +S G +GLK + I P L+ ++ +A G H
Sbjct: 144 IACGGYHSAAITKNGELYIWGS--NSEGQLGLKNDTIS-YPTMLDLGKSVISVACGYYHT 200
Query: 185 VMLTSRGNLLTAGCPEQGQ--LGRITQRSASR-NARRGMSFLEPGEVPLKRKHIDDVFTG 241
++T+ G L T G E G+ LG I ++ +G+S G+V + G
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGIS----GKV------VKVACGG 250
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ +++ G + FG QLG S++ S P L+++LS +K +A G+
Sbjct: 251 NHTVALTASGQVYTFGSGQNGQLGLG-SKIMDSN-----IPKLVEALSKRKIKHIACGES 304
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFA-- 358
H+ ++ +G+++ FG +G+LG + S + +P + L++ + IACG C +
Sbjct: 305 HTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVAC 364
Query: 359 --IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
ID +L NG +D+ +S ++ D+G+ L S+ +
Sbjct: 365 NKID--------------KLANGDDDNESSSNDEV------DFGKTKLMLSSDELNRTDD 404
Query: 417 IP-SLQDK 423
IP S +D+
Sbjct: 405 IPLSARDR 412
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 51/370 (13%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQIS 126
D V ++ G HTV +TE+G+++T+G N+ G LG + P TV P+K ++
Sbjct: 35 DKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGI-GSNKTRNKPTTVKALKPEKITHVA 93
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHF 184
AG H++A+ + +Y++G + S G++G E P +ES+ + IA G H
Sbjct: 94 AGRFHTLAVTDSNKLYSFG--QGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHS 151
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+T G L G +GQLG + + P + L K + V G Y+
Sbjct: 152 AAITKNGELYIWGSNSEGQLGL-----------KNDTISYPTMLDLG-KSVISVACGYYH 199
Query: 245 T-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
T +++ G + FG +LG D E K P ++K +S K +A G +H+
Sbjct: 200 TAVVTADGKLYTFGETEGGKLGLGDIEAHK-----VTKPKVVKGISGK-VVKVACGGNHT 253
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
+AL + G++Y FG G+LGL + P + +L + I IACG + + +G
Sbjct: 254 VALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKG 313
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
L+ +G G +LG G E N+ +PV + L++
Sbjct: 314 ELFTFGDGRHGKLGQGDE---------------------SFSNLFKPV----KVQRLKEF 348
Query: 424 TITSIACGNC 433
+ IACG C
Sbjct: 349 IVLHIACGGC 358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 45/210 (21%)
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++ FG+ +G T ++ +T IACG+ + + G L+ +G
Sbjct: 12 GAVFTFGKSRFG-----------DNRTNKFWIRSDKVTDIACGDEHTVVVTENGRLFTFG 60
Query: 370 MGNGYQLGNG--------------KEDDI------------LNSEGKIYAFGRHDYGRLG 403
QLG G K + I + K+Y+FG+ G LG
Sbjct: 61 NNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALG 120
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ ++ + PT I SL+DK + IACG S AI G LY WG + QLG K D I
Sbjct: 121 HGDETD-LNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLG-LKNDTI 178
Query: 464 LEPMKIE-GKQLNNYTVLQVASGGQHSVIL 492
P ++ GK +V+ VA G H+ ++
Sbjct: 179 SYPTMLDLGK-----SVISVACGYYHTAVV 203
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 181/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G +YA G
Sbjct: 2731 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKIYACG 2788
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 2789 EATNGRLGLGLSS-GTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2847
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + ++GL
Sbjct: 2848 GKLGHFSRMNCDKP-----RLIEA----LKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P L+K L + +A G +LAL EG ++++G
Sbjct: 2899 YGRLGHGD-------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2951
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2952 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3003
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3004 -------------------DYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3043
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3044 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3093
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 180/439 (41%), Gaps = 79/439 (17%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3815
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3816 -YGAGGRLGIGGTESV-STPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3873
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 3874 GKLGHGNRSPCDRP--RVIESLRGVEV------VDIAAGGAHSACITASGELFTWGKGRY 3925
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+ +L + +A SG +L L + ++++G D
Sbjct: 3926 GRLGHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 3978
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3979 YGKLG-RGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKG-------- 4029
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 437
DY RLG + V P + LQ K + +IA G +CV
Sbjct: 4030 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4070
Query: 438 IDSE---------------GVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTV 479
D G +Y WG + QLG+G + I P ++GK++N
Sbjct: 4071 EDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN---- 4126
Query: 480 LQVASGGQHSVILAKPKPN 498
+VA G H++ + KP
Sbjct: 4127 -RVACGSAHTLSWSTSKPT 4144
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 40/248 (16%)
Query: 280 FTPHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P LI SLS +K LA+ GQH+ LAL+S G+++++G D GRLG + + + EPT
Sbjct: 445 LAPMLIHSLSSRKMVKLAAHPDGQHY-LALSSNGEVFSWGCGDGGRLGHGDTTY-LEEPT 502
Query: 337 PIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
I + K + IACG+ S AI +G LY WG GN +LG+G +D
Sbjct: 503 MIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTA 562
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ G+++++G DYG+LG + S+ P + LQD
Sbjct: 563 LKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLD 621
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I + CG+ S A+ +G +Y WG G+ +LG+G ++ + P ++ L V+ VA
Sbjct: 622 IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLD--TLQGKKVVDVAV 679
Query: 485 GGQHSVIL 492
G H + L
Sbjct: 680 GSTHCLAL 687
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 182/411 (44%), Gaps = 46/411 (11%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3755 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA 3813
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ + V +++G H +AL +G VY+WG D
Sbjct: 3814 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3873
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V IA+G H +T+ G L T G +G+ GR+
Sbjct: 3874 --GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG---KGRYGRL 3928
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ + ++G +Y +
Sbjct: 3929 GHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 3981
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K TP I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3982 LGRGGSDGCK-------TPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRL 4034
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
G + V P + LQ K + +IA G +CV D ++ WG+ + LG
Sbjct: 4035 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPR-WSLG---- 4088
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
G++Y +G +D G+LG + + P + +LQ K I +ACG+
Sbjct: 4089 ------LGEVYTWGDNDEGQLG-DGTTNAIQRPRLVAALQGKKINRVACGS 4132
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 159/343 (46%), Gaps = 51/343 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G + CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 2841
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D+G LG + + + P+ + K+ I+ G SHS A+ G +Y+WG
Sbjct: 2842 WGEGDDGKLGHFSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGL---- 2896
Query: 151 HGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQ 203
G G G G T L+ + V ++++A G+ + LT G + + G + G+
Sbjct: 2897 -GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 2955
Query: 204 LGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
LGR I Q N +G+ +E G ++ ++ G + +
Sbjct: 2956 LGRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTW 3000
Query: 257 GLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G +Y +LG D V+K P +++ L KK +A G H LA+ G++YA+
Sbjct: 3001 GKGDYFRLGHGTDVHVRK--------PQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3052
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3053 GDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--------KKAVQISAGD 129
G H + L+ +G+V++WGC D G LG GD+ ++ + + K V I+ G
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLG---HGDTTYLEEPTMIAAFNGKQAGKHVVHIACGS 523
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFV 185
++S A+ DG +Y WG R ++G +G Q TP+ + ++ G+ V SG +
Sbjct: 524 TYSAAITVDGELYTWG--RGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YN 244
+T G + + G + G+LGR + + +E L+ I V G ++
Sbjct: 582 AVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLVE----KLQDLDIVKVCCGSQFS 632
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ G + +G + +LG E + P L+ +L KK +A G H L
Sbjct: 633 VALTKDGQVYTWGKGDNQRLGHGTDEHVR-------FPKLLDTLQGKKVVDVAVGSTHCL 685
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
AL +G+++++G +D + + +P +P L K I I+CG SFA S
Sbjct: 686 ALTDDGEVHSWGSNDKLQ-HFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWSS 741
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2729 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2781
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GKIYA G GRLGL S + P I +L + + +A G + A+ +G ++
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 2841
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 2842 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKAKRIRD 2874
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L P + K L + V+QVA G +
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLV--KVLLGHRVIQVACGSR 2932
Query: 488 HSVILA 493
+ LA
Sbjct: 2933 DAQTLA 2938
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 73/350 (20%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + VE
Sbjct: 3840 QHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGVE 3897
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G+++TWG +G GR GDSE P+ V+ + +
Sbjct: 3898 ----VVDIAAGGAHSACITASGELFTWG---KGRYGRLGHGDSEDQLKPKLVDALQGHRV 3950
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ ++ +GD+ ++ L +D V++WG +G +G G KTP+K++S++ G++K+
Sbjct: 3951 IDVACGSGDAQTLCLTDDDMVWSWGD--GDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVE 4008
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4009 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4058
Query: 238 VFTGVYNTFISSK------------------GSILAFGLNNYSQLGEADSE-VQKSGNTC 278
+ TG + ++ G + +G N+ QLG+ + +Q+
Sbjct: 4059 IATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQR----- 4113
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSE-----GKIYAFGRHDYGRL 323
P L+ +L KK +A G H+L+ ++ GK+ A +Y L
Sbjct: 4114 ---PRLVAALQGKKINRVACGSAHTLSWSTSKPTNAGKLPAQVPMEYNHL 4160
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 136/332 (40%), Gaps = 57/332 (17%)
Query: 120 KKAVQISAGD--SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---- 173
+K V+++A H +AL +G V++WG G +G + P + + +G
Sbjct: 456 RKMVKLAAHPDGQHYLALSSNGEVFSWGC--GDGGRLGHGDTTYLEEPTMIAAFNGKQAG 513
Query: 174 --IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+V IA G+ + +T G L T G +G GR+ S+ + LK
Sbjct: 514 KHVVHIACGSTYSAAITVDGELYTWG---RGNYGRLGHGSSEDQTTPMLV------TALK 564
Query: 232 RKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ DV G ++ G + ++G +Y +LG S+ K TP L++ L
Sbjct: 565 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK-------TPKLVEKL 617
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
D + G S+AL +G++Y +G+ D RLG E V P + +LQ K +
Sbjct: 618 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGTDEHVRFPKLLDTLQGKKVVD 676
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G+ A+ +G ++ WG + Q D L S K
Sbjct: 677 VAVGSTHCLALTDDGEVHSWGSNDKLQ-----HFDTLFSNKK------------------ 713
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+P +P L K I I+CG SFA S
Sbjct: 714 ----QPKALPGLNSKHIVGISCGPGQSFAWSS 741
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 16/122 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G +V LT+
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-----LQDLD-IVKVCCGSQFSVALTK 637
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAW 144
DG+VYTWG D LG + F P+ ++ KK V ++ G +H +AL +DG V++W
Sbjct: 638 DGQVYTWGKGDNQRLGHGTDEHVRF-PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 696
Query: 145 GS 146
GS
Sbjct: 697 GS 698
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDV-MERKT----FALVEDLDNVVEVVVGGMHTVCLTEDG 88
+ G V + G GD G+LG G +E T F + +VV + G ++ +T DG
Sbjct: 474 SSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDG 533
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAW 144
++YTWG + G LG + D + P V K K V ++ +GD+ ++A+ E+G V++W
Sbjct: 534 ELYTWGRGNYGRLGHGSSED-QTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSW 592
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G +G +G G KTP +E + IVK+ G+ V LT G + T G +
Sbjct: 593 GD--GDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 650
Query: 203 QLG 205
+LG
Sbjct: 651 RLG 653
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T GVV T G+GD +LG G DV RK +VE L +V V VG +H + +T+ G+VY
Sbjct: 2992 TKSGVVWTWGKGDYFRLGHGTDVHVRKP-QMVEGLRGKKIVHVAVGALHCLAVTDTGQVY 3050
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVAL----LEDGTVYAWGS 146
WG ND G G + L +K +++ G SHSVA + +V+
Sbjct: 3051 AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPSVHEPVL 3110
Query: 147 FRDSHGSMGLKGEGIQ 162
F+ + S+G G+Q
Sbjct: 3111 FQTARDSLGASYLGVQ 3126
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G V T G+GD +LG G D E F + D VV+V VG H + LT+DG+V
Sbjct: 636 TKDGQVYTWGKGDNQRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEV 693
Query: 91 YTWGCNDE 98
++WG ND+
Sbjct: 694 HSWGSNDK 701
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H ++L +
Sbjct: 715 VAAGSTHCLVLTE 727
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4013 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4071 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4123 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4226
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4227 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4267
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4322
Query: 497 P 497
P
Sbjct: 4323 P 4323
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 182/414 (43%), Gaps = 63/414 (15%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAFGL 258
G+LG ++ M+ +P + LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 DGKLGHFSR----------MNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGL 3126
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFG 316
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3127 GEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3180 DGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG----- 3233
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
DY RLG V +P + L+ K I +A G
Sbjct: 3234 ---------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3271
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 51/343 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D+G LG D + Q + K+ I+ G SHS L G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKT-KRIRDIAYGSSHSAPLTSSGELYTWGL---- 3126
Query: 151 HGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQ 203
G G G G T LK + V ++++A G+ + LT G + + G + G+
Sbjct: 3127 -GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 204 LGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
LGR I Q N +G+ +E G ++ ++ G + +
Sbjct: 3186 LGRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTW 3230
Query: 257 GLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G +Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+
Sbjct: 3231 GKGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 GDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 89/366 (24%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 455 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 504
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 546
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 599
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 658
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 385 ------LNSEGKIYAFGRHD----YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
L + +++++G +D + LG V++P EPT P L K I IACG
Sbjct: 719 STHCLVLTEDSEVHSWGSNDQCQHFDTLG---VTKP--EPTAFPGLDSKHIVGIACGPAQ 773
Query: 435 SFAIDS 440
SFA S
Sbjct: 774 SFAWSS 779
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4071 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4125
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4126 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4179 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4231
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4232 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4286
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4287 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P ++++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4113
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4114 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4171 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4229 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4279 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4330
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4331 AQVPMEYNHL 4340
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 49/313 (15%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHD----YGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+A+G H L L + +++++G +D + LG V++P EPT P L K I
Sbjct: 712 VIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLG---VTKP--EPTAFPGLDSKHIVG 766
Query: 349 IACGNCVSFAIDS 361
IACG SFA S
Sbjct: 767 IACGPAQSFAWSS 779
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 40/275 (14%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+Y+ G GRLGL S V P I +L + +A G + A+ +G ++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 368 WGMGNGYQLGN-----------------GKEDDI---------LNSEGKIYAFGRHDYGR 401
WG G+ +LG+ + DI L S G++Y +G +YGR
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
LG + + + +P + L + +ACG + + A+ EG+++ WG G+ +LG G
Sbjct: 3132 LGHGDNTTQL-KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ P IE +LN V Q+ G Q S+ L K
Sbjct: 3191 SEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTK 3223
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ + +G E + P LE + G ++ +A+G+ H ++LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ- 741
Query: 205 GRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
G++ EP P L KHI + G +F S S + GL
Sbjct: 742 ---------HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNYS 262
LG T+ R LE L+ K + DV G + + ++ S + ++G N+
Sbjct: 690 LGHGTEEHV-----RYPKLLE----GLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQC 740
Query: 263 Q 263
Q
Sbjct: 741 Q 741
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4273
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4274 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
>gi|402466655|gb|EJW02104.1| hypothetical protein EDEG_03447, partial [Edhazardia aedis USNM
41457]
Length = 332
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 163/334 (48%), Gaps = 33/334 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV---NLPKKAVQISA 127
V VV G +HT+ L + K+YTWGCNDE ALGRE GD + I + V + V ISA
Sbjct: 1 VESVVAGSLHTIALVNN-KIYTWGCNDEFALGRE--GDEDKIREVVLKTRTKSEVVGISA 57
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVM 186
G SHS LLE+G VYAWG+FRD+ G +G + QKTP + + KI S + M
Sbjct: 58 GASHSACLLENGNVYAWGTFRDTSGIIGFDYKTKYQKTPKLIH--RNVKKIFSTDNVITM 115
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
L G +++ G +I +R+ + M ++ + P ++K I ++ G ++
Sbjct: 116 LLKTGGIVSYGADLWRDRFKIERRTRCFKNKPKMKTVQRAK-PSQKK-IVEISGGDHHML 173
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I+ G++ A+G N Q G C +P I + K + G HSL
Sbjct: 174 GITYDGNVKAWGNNFCGQHGNGHK-------VCCDSPTDIIKI--KNIVKVKGGTTHSLF 224
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L+++G +Y G + YG+L K E +T P+L ++ A ++F + +GV
Sbjct: 225 LDNDGFLYGCGENGYGQLSHKE-KELLT-----PTLVANNVSDFATAGLITFVVKEDGV- 277
Query: 366 YGWGMGNGYQLG---NGKEDDILNSEGKIYAFGR 396
Y G +LG NG+ D LN + FG+
Sbjct: 278 YSCGTNYYGELGHKENGENVDFLNKIN--FKFGK 309
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + CG+ GQL E++ +NV + G+ T + EDG VY+ G N
Sbjct: 229 GFLYGCGENGYGQLSH----KEKELLTPTLVANNVSDFATAGLITFVVKEDG-VYSCGTN 283
Query: 97 DEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDG 139
G LG + G++ +N K V I+ G SH+V +++DG
Sbjct: 284 YYGELGHKENGENVDFLNKINFKFGKVVGITCGGSHTVIVVDDG 327
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 212/477 (44%), Gaps = 82/477 (17%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFA-LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
+VL G G+ GQLG+G + E K +A VE L + V VV G +++ + EDG+++TWG
Sbjct: 45 LVLYRGSGEDGQLGMGGN--EEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWG 102
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G LG + +E P V+ K VQ + G H +A+ ++G YAWG
Sbjct: 103 WNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWG------- 155
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS- 211
+ T SV+G GN E GQ G +R
Sbjct: 156 ---------RGTRFPAFSVTG-----------------GN-------EYGQCGEEPERKE 182
Query: 212 -ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+R RR + + LK + + G ++ ++ +G + +G Q
Sbjct: 183 DGTRALRRDIPTPQRCAPKLKVRQV--AAGGTHSVVLTQEGHVWTWG-----QPWPPGDI 235
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
Q S TP ++ L +K ++A G H+LAL +G ++A+G ++YG+LG + ++
Sbjct: 236 KQIS------TPVRVQGL--EKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGD-TQ 286
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG- 389
P + P + L D ++ IA G S A+ +G + + K+ I+ +
Sbjct: 287 PRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEINS--LPCYLFRACFKDVQIIKYQKY 344
Query: 390 -----KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
K+YA+GR ++GRLG + P + L + I ++CG S A+ +G +
Sbjct: 345 TYYTMKVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRM 404
Query: 445 YGWGMGNGYQLGNGKE---------DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ +G G+ +LG G++ D L P K + + VA GG+H++ +
Sbjct: 405 FSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAI 461
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 56/293 (19%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
F G ++A L Y GE D ++ GN H +++L T + +G +SLA
Sbjct: 33 FSRRGGPLIALVLVLYRGSGE-DGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLA 91
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
+ +G+++ +G + G LG ++ + P P+ +L I A G A+D G
Sbjct: 92 ICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHA 151
Query: 366 YGWGMGNGY------------QLGN----------------------------------G 379
Y WG G + Q G G
Sbjct: 152 YAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGG 211
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+L EG ++ +G+ + +K +S PV + L+ + IA G + A+
Sbjct: 212 THSVVLTQEGHVWTWGQ-PWPPGDIKQISTPVR----VQGLEK--VRVIAVGAFHNLALT 264
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+G+L+ WG QLG G P+++EG L++ +++ +A+GG HS L
Sbjct: 265 EDGILWAWGNNEYGQLGTGDTQPRSHPIRVEG--LSDLSLVDIAAGGWHSTAL 315
>gi|284032915|ref|YP_003382846.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
17836]
gi|283812208|gb|ADB34047.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
17836]
Length = 666
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 163/370 (44%), Gaps = 41/370 (11%)
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
A V L NV EV G H++ L DG V+TWG N+ G LG + + P V
Sbjct: 53 APVTSLTNVTEVEAGREHSIALRSDGTVWTWGFNEMGQLG-DGTATNRPAPVQVGGLSGV 111
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG----IQKTPLKLESVSGIVKIA 178
V I+ G HS+ALL DGTV AWG + S G G G Q+TP+ + +SG++ IA
Sbjct: 112 VDIAGGHYHSLALLADGTVRAWG-----YNSFGQLGNGATTSAQRTPVAVTPLSGVLAIA 166
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G D + S G + G GQLG T +R R G S + R H
Sbjct: 167 GGRDMSYAVRSDGTVWGWGLNTTGQLGDGTTTMRTRPVRVG-SLAGITAISGGRDH---- 221
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ S G++ A+G N Q+G+ T P + ++ +A+
Sbjct: 222 -----GLAVRSDGTVWAWGDNTQGQVGDGSL-------TNRLAPVQVPGVTGA--VEVAA 267
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +HS+A + G + ++G++ G+LG + T+ +P + T+IA G S A
Sbjct: 268 GAYHSIARLTGGTLRSWGQNSNGQLG-DGTTTRRTQSVAVPGVSGA--TAIATGRQHSVA 324
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNS--------EGKIYAFGRHDYGRLGLKNVSEP 410
+ S G L WG QLG+G D N+ ++ A GR L VSEP
Sbjct: 325 VVSGGALRAWGSNAAGQLGDGTSTDRPNAVTVAGIAGAAEVSA-GRDHTLALVPAEVSEP 383
Query: 411 VTEPTPIPSL 420
T P P +
Sbjct: 384 DTTPPSAPGV 393
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 177/424 (41%), Gaps = 73/424 (17%)
Query: 78 GMHT--VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
G+H E G + WG N G LG +L ++ AG HS+AL
Sbjct: 16 GLHQSEAAAVEPGSAWAWGGNGTGQLGNGTTTGRGTAAPVTSL-TNVTEVEAGREHSIAL 74
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
DGTV+ WG F + MG G+G + P+++ +SG+V IA G H + L + G
Sbjct: 75 RSDGTVWTWG-FNE----MGQLGDGTATNRPAPVQVGGLSGVVDIAGGHYHSLALLADGT 129
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS 252
+ G GQLG A+ +A+R + P L D+ + + S G+
Sbjct: 130 VRAWGYNSFGQLGN----GATTSAQRTPVAVTPLSGVLAIAGGRDM-----SYAVRSDGT 180
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ +GLN QLG+ G T T P + SL+ T ++ G+ H LA+ S+G
Sbjct: 181 VWGWGLNTTGQLGD--------GTTTMRTRPVRVGSLA--GITAISGGRDHGLAVRSDGT 230
Query: 312 IYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
++A+G + G++G L N PV P +++ +A G S A + G L W
Sbjct: 231 VWAWGDNTQGQVGDGSLTNRLAPVQVPGVTGAVE------VAAGAYHSIARLTGGTLRSW 284
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G + QLG+G + T+ +P + T +I
Sbjct: 285 GQNSNGQLGDG---------------------------TTTRRTQSVAVPGVSGAT--AI 315
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
A G S A+ S G L WG QLG+G D + + G +V++G H
Sbjct: 316 ATGRQHSVAVVSGGALRAWGSNAAGQLGDGTSTDRPNAVTVAGIA----GAAEVSAGRDH 371
Query: 489 SVIL 492
++ L
Sbjct: 372 TLAL 375
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 30/292 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G + GQLG G R V L VV++ G H++ L DG V WG N
Sbjct: 78 GTVWTWGFNEMGQLGDG-TATNRPAPVQVGGLSGVVDIAGGHYHSLALLADGTVRAWGYN 136
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG A ++ P V + I+ G S A+ DGTV+ WG ++ G +G
Sbjct: 137 SFGQLGNGATTSAQRTPVAVTPLSGVLAIAGGRDMSYAVRSDGTVWGWG--LNTTGQLGD 194
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASR 214
++ P+++ S++GI I+ G DH + + S G + G QGQ+ G +T R
Sbjct: 195 GTTTMRTRPVRVGSLAGITAISGGRDHGLAVRSDGTVWAWGDNTQGQVGDGSLTNR---- 250
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQK 273
L P +VP + +V G Y++ + G++ ++G N+ QLG+
Sbjct: 251 --------LAPVQVPGVTGAV-EVAAGAYHSIARLTGGTLRSWGQNSNGQLGD------- 294
Query: 274 SGNTCFFTPHL-IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G T T + + +S T +A+G+ HS+A+ S G + A+G + G+LG
Sbjct: 295 -GTTTRRTQSVAVPGVSGA--TAIATGRQHSVAVVSGGALRAWGSNAAGQLG 343
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 295 MLASGQHHSLALNSE-GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+LA+G H S A E G +A+G + G+LG + P+ SL + +T + G
Sbjct: 12 LLATGLHQSEAAAVEPGSAWAWGGNGTGQLGNGTTTG-RGTAAPVTSLTN--VTEVEAGR 68
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEG 389
S A+ S+G ++ WG QLG+G + L ++G
Sbjct: 69 EHSIALRSDGTVWTWGFNEMGQLGDGTATNRPAPVQVGGLSGVVDIAGGHYHSLALLADG 128
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
+ A+G + +G+LG N + + TP+ + +IA G +S+A+ S+G ++GWG+
Sbjct: 129 TVRAWGYNSFGQLG--NGATTSAQRTPVAVTPLSGVLAIAGGRDMSYAVRSDGTVWGWGL 186
Query: 450 GNGYQLGNGKEDDILEPMKI 469
QLG+G P+++
Sbjct: 187 NTTGQLGDGTTTMRTRPVRV 206
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GG + + GQ GQLG G ++ A V + + G H+V + G + WG
Sbjct: 278 GGTLRSWGQNSNGQLGDGTTTRRTQSVA-VPGVSGATAIATGRQHSVAVVSGGALRAWGS 336
Query: 96 NDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALL 136
N G LG +G S P V + A ++SAG H++AL+
Sbjct: 337 NAAGQLG---DGTSTDRPNAVTVAGIAGAAEVSAGRDHTLALV 376
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 389 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 447
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 448 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 507
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 508 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 566
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 567 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 624
Query: 482 VASGGQHSVILAK 494
VA+G H ++L +
Sbjct: 625 VAAGSTHCLVLTE 637
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3923 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3980
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3981 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4032
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4033 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4085
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4086 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4136
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4137 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4177
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4178 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4232
Query: 497 P 497
P
Sbjct: 4233 P 4233
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 182/414 (43%), Gaps = 63/414 (15%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2871 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 2928
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2929 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 2986
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAFGL 258
G+LG ++ M+ +P + LK K I D+ G ++ ++S G + +GL
Sbjct: 2987 DGKLGHFSR----------MNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGL 3036
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFG 316
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3037 GEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3089
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3090 DGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG----- 3143
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
DY RLG V +P + L+ K I +A G
Sbjct: 3144 ---------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3181
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3182 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3233
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 51/343 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2981
Query: 93 WGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D+G LG D + Q + K+ I+ G SHS L G +Y WG
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKT-KRIRDIAYGSSHSAPLTSSGELYTWGL---- 3036
Query: 151 HGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQ 203
G G G G T LK + V ++++A G+ + LT G + + G + G+
Sbjct: 3037 -GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3095
Query: 204 LGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
LGR I Q N +G+ +E G ++ ++ G + +
Sbjct: 3096 LGRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTW 3140
Query: 257 GLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G +Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+
Sbjct: 3141 GKGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3192
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3193 GDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 89/366 (24%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 365 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 414
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 456
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 457 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 509
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 510 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 568
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 569 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 628
Query: 385 ------LNSEGKIYAFGRHD----YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
L + +++++G +D + LG V++P EPT P L K I IACG
Sbjct: 629 STHCLVLTEDSEVHSWGSNDQCQHFDTLG---VTKP--EPTAFPGLDSKHIVGIACGPAQ 683
Query: 435 SFAIDS 440
SFA S
Sbjct: 684 SFAWSS 689
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3862 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3920
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3921 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3980
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3981 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4035
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4036 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4088
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4089 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4141
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4142 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4196
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4197 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2863 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2917
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2918 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 2977
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P ++++ I IA G+ H LTS G L T G
Sbjct: 2978 KVFSWGEGDD--GKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3035
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3036 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3082
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3083 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3135
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3136 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3194
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3195 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3227
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3228 GSSHSVA 3234
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 3970 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4023
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4024 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4080
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4081 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4138
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4139 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4188
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4189 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4240
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4241 AQVPMEYNHL 4250
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 49/313 (15%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 461
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 462 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 519
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 520 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 568
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 569 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 621
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHD----YGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+A+G H L L + +++++G +D + LG V++P EPT P L K I
Sbjct: 622 VIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLG---VTKP--EPTAFPGLDSKHIVG 676
Query: 349 IACGNCVSFAIDS 361
IACG SFA S
Sbjct: 677 IACGPAQSFAWSS 689
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 40/275 (14%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2869 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2921
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+Y+ G GRLGL S V P I +L + +A G + A+ +G ++
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2981
Query: 368 WGMGNGYQLGN-----------------GKEDDI---------LNSEGKIYAFGRHDYGR 401
WG G+ +LG+ + DI L S G++Y +G +YGR
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
LG + + + +P + L + +ACG + + A+ EG+++ WG G+ +LG G
Sbjct: 3042 LGHGDNTTQL-KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3100
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ P IE +LN V Q+ G Q S+ L K
Sbjct: 3101 SEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTK 3133
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 478 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 536
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 537 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 593
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ + +G E + P LE + G ++ +A+G+ H ++LT + + G +Q Q
Sbjct: 594 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ- 651
Query: 205 GRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
G++ EP P L KHI + G +F S S + GL
Sbjct: 652 ---------HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 698
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 425 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 482
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 483 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 541
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 542 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 599
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNYS 262
LG T+ R LE L+ K + DV G + + ++ S + ++G N+
Sbjct: 600 LGHGTEEHV-----RYPKLLE----GLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQC 650
Query: 263 Q 263
Q
Sbjct: 651 Q 651
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4125 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4183
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4184 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4227
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 181/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G +YA G
Sbjct: 2957 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKIYACG 3014
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 3015 EATNGRLGLGLSS-GTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3073
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + ++GL
Sbjct: 3074 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3124
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P L+K L + +A G +LAL EG ++++G
Sbjct: 3125 YGRLGHGD-------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDG 3177
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3178 DFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3229
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3230 -------------------DYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3269
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3270 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3319
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 179/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + + VQ+ G+ A+ DG +YA G
Sbjct: 3951 GTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATG 4009
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4010 -YGAGGRLGIGGTESV-STPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4067
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4068 GKLGHGNRSPCDRP--RVIESLRGVEV------VDIAAGGAHSACITASGELFTWGKGRY 4119
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+ +L + +A SG +L L + ++++G D
Sbjct: 4120 GRLGHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4172
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4173 YGKLG-RGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4223
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4224 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4264
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4265 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4319
Query: 497 PN 498
P
Sbjct: 4320 PT 4321
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 40/248 (16%)
Query: 280 FTPHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P LI LS +K LA+ GQH+ LAL+S G+++++G D GRLG + + + EP
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHY-LALSSNGEVFSWGCGDGGRLGHGDTTY-LEEPK 530
Query: 337 PIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------- 383
I + K + +ACG+ S AI ++G LY WG GN +LG+G +D
Sbjct: 531 MIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTA 590
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ G+++++G DYG+LG + S+ P + LQD
Sbjct: 591 FKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLD 649
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I + CG+ S A+ +G +Y WG G+ +LG+G ++ + P ++ L V+ VA
Sbjct: 650 IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDS--LQGKKVVDVAV 707
Query: 485 GGQHSVIL 492
G H + L
Sbjct: 708 GSTHCLAL 715
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G + CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFS 3067
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y+WG
Sbjct: 3068 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL----- 3122
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T L+ + V ++++A G+ + LT G + + G + G+L
Sbjct: 3123 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKL 3182
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR + Q N +G+ +E G ++ ++ G + +G
Sbjct: 3183 GRGGSEGCNVPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3227
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3228 KGDYFRLGHGTDVHVRK--------PQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3279
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3280 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3320
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 172/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3949 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYA 4007
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ + V +++G H +AL +G VY+WG D
Sbjct: 4008 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4067
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V IA+G H +T+ G L T G +G+ GR+
Sbjct: 4068 --GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG---KGRYGRL 4122
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ + ++G +Y +
Sbjct: 4123 GHGDSEDQ-------LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4175
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4176 LGRGGSDGCK-------IPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4228
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4229 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4283
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4284 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4314
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 193/411 (46%), Gaps = 75/411 (18%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + VE
Sbjct: 4034 QHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGVE 4091
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G+++TWG +G GR GDSE P+ V+ + +
Sbjct: 4092 ----VVDIAAGGAHSACITASGELFTWG---KGRYGRLGHGDSEDQLKPKLVDALQGHRV 4144
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ ++ +GD+ ++ L +D V++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4145 IDVACGSGDAQTLCLTDDDMVWSWGD--GDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVE 4202
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4203 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4252
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4253 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINR 4304
Query: 296 LASGQHHSLALNSE-----GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT----- 345
+A G H+LA ++ GK+ A +Y L + PI +L+++
Sbjct: 4305 VACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL----------QEIPIMALRNRLVLLHH 4354
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
I+ + C C+ D EG L G+G +G IL S+GK AF +
Sbjct: 4355 ISELFC-PCIPM-FDLEGRLG--QTGHGPSVGFDTLRGILISQGKEAAFRK 4401
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTV------NLPKKAVQISAGD 129
G H + L+ +G+V++WGC D G LG GD+ ++ P+ + K V ++ G
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLG---HGDTTYLEEPKMIGTFNGKQAGKHVVHVACGS 551
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFV 185
++S A+ DG +Y WG R ++G +G Q TP+ + + G+ V SG +
Sbjct: 552 TYSAAITADGELYTWG--RGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YN 244
+T G + + G + G+LGR + + +E L+ I V G ++
Sbjct: 610 AVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLVE----KLQDLDIVKVCCGSQFS 660
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ G + +G + +LG E + P L+ SL KK +A G H L
Sbjct: 661 VALTKDGQVYTWGKGDNQRLGHGTDEHVR-------YPKLLDSLQGKKVVDVAVGSTHCL 713
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +G++ ++G +D + + +P +P L K I I+CG SFA S
Sbjct: 714 ALTDDGEVLSWGSNDKLQ-HFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWSSSS- 771
Query: 365 LYGWGMGN 372
W +G
Sbjct: 772 --EWSVGK 777
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 59/323 (18%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--- 228
IVK+A+ D H++ L+S G + + GC + G+LG ++LE ++
Sbjct: 486 IVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGH-----------GDTTYLEEPKMIGT 534
Query: 229 ---PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
KH+ V G Y+ I++ G + +G NY +LG SE Q TP +
Sbjct: 535 FNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQT-------TPMV 587
Query: 285 IKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+ + K +A SG +LA+ G+++++G DYG+LG + S+ P + LQ
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQ 646
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
D I + CG+ S A L +G++Y +G+ D RL
Sbjct: 647 DLDIVKVCCGSQFSVA--------------------------LTKDGQVYTWGKGDNQRL 680
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G E V P + SLQ K + +A G+ A+ +G + WG + Q + +
Sbjct: 681 G-HGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSN 739
Query: 463 ILEPMKIEGKQLNNYTVLQVASG 485
+P + G LN+ ++ ++ G
Sbjct: 740 KKQPKALPG--LNSKHIVGISCG 760
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2955 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3007
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GKIYA G GRLGL S + P I +L + I +A G + A+ +G ++
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFS 3067
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3068 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3100
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L P + K L + V+QVA G +
Sbjct: 3101 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLV--KVLLGHRVIQVACGSR 3158
Query: 488 HSVILA 493
+ LA
Sbjct: 3159 DAQTLA 3164
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 138/343 (40%), Gaps = 60/343 (17%)
Query: 120 KKAVQISAGD--SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---- 173
+K V+++A H +AL +G V++WG G +G + P + + +G
Sbjct: 484 RKIVKLAAHPDGQHYLALSSNGEVFSWGC--GDGGRLGHGDTTYLEEPKMIGTFNGKQAG 541
Query: 174 --IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+V +A G+ + +T+ G L T G G+LG +S + M K
Sbjct: 542 KHVVHVACGSTYSAAITADGELYTWGRGNYGRLGH----GSSEDQTTPMVV-----TAFK 592
Query: 232 RKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ DV G ++ G + ++G +Y +LG S+ K TP L++ L
Sbjct: 593 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK-------TPKLVEKL 645
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
D + G S+AL +G++Y +G+ D RLG E V P + SLQ K +
Sbjct: 646 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGTDEHVRYPKLLDSLQGKKVVD 704
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G+ A+ +G + WG + Q D L S K
Sbjct: 705 VAVGSTHCLALTDDGEVLSWGSNDKLQ-----HFDTLFSNKK------------------ 741
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+P +P L K I I+CG SFA S W +G
Sbjct: 742 ----QPKALPGLNSKHIVGISCGPGQSFAWSSSS---EWSVGK 777
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERK-----TFALVEDLDNVVEVVVGGMHTVCLTEDG 88
+ G V + G GD G+LG G + TF + +VV V G ++ +T DG
Sbjct: 502 SSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADG 561
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAW 144
++YTWG + G LG + D + P V K K V ++ +GD+ ++A+ E+G V++W
Sbjct: 562 ELYTWGRGNYGRLGHGSSED-QTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSW 620
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G +G +G G KTP +E + IVK+ G+ V LT G + T G +
Sbjct: 621 GD--GDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 678
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
+LG T R L+ L+ K + DV G + ++ G +L++G N+
Sbjct: 679 RLGHGTDEHV-----RYPKLLD----SLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDK 729
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH--- 318
Q + +K P + L+ K ++ G S A +S + ++ G+
Sbjct: 730 LQHFDTLFSNKKQ-------PKALPGLNSKHIVGISCGPGQSFAWSSSSE-WSVGKRVPF 781
Query: 319 ---------DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+ L L+ VSE + + P Q+K +A N + +
Sbjct: 782 VVDVCPMTFEQLDLLLRQVSEGMDGSSDWPPPQEKECMVVATLNLLRLQL 831
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T GVV T G+GD +LG G DV RK +VE L +V V VG +H + +T+ G+VY
Sbjct: 3218 TKSGVVWTWGKGDYFRLGHGTDVHVRKP-QMVEGLRGKKIVHVAVGALHCLAVTDTGQVY 3276
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVAL----LEDGTVYAWGS 146
WG ND G G + L +K +++ G SHSVA + +V+
Sbjct: 3277 AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPSVHEPVL 3336
Query: 147 FRDSHGSMGLKGEGIQ 162
F+ + S+G G+Q
Sbjct: 3337 FQTARDSLGASYLGVQ 3352
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4013 -YGAGGRLGVGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4071 GKLGHGNRSPCDRP--RVIESLRGTEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4123 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4226
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4227 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCS 4267
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4322
Query: 497 P 497
P
Sbjct: 4323 P 4323
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3233
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3234 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3274 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 154/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP+ +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4011 TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4071 --GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4125
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4126 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4179 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4231
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4232 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG---- 4286
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4287 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 185/416 (44%), Gaps = 85/416 (20%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVME--RKTFAL 64
Q VF+ AV + + G V + G+ + G+LG G P V+E R T
Sbjct: 4037 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT--- 4093
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK-- 120
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V +
Sbjct: 4094 -----EVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGH 4145
Query: 121 KAVQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVK 176
+ V ++ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK
Sbjct: 4146 RVVDVACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4203
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHI 235
+ G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKV 4253
Query: 236 DDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKF 293
+ TG ++ S G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4254 IAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKV 4305
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD---------- 343
+A G H+LA ++ A G+L PV P LQ+
Sbjct: 4306 NRVACGSAHTLAWSTSKPASA------GKL-------PVQVPMEYNHLQEIPIIALRNRL 4352
Query: 344 ---KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
I+ + C C+ D EG L G+G +G IL S+GK AF +
Sbjct: 4353 LLLHHISELFC-PCIPM-FDLEGSLDETGLGPS--VGFDTLRGILISQGKEAAFRK 4404
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP+ +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPSALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1086
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 185/438 (42%), Gaps = 77/438 (17%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA-----------VQIS 126
G ++ + DG Y WG N G LG +S + P V P + VQ+S
Sbjct: 567 GSFSLAVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQVS 626
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---------IVKI 177
AG HS+A+ DG YAWG+ + K P+++ +++
Sbjct: 627 AGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSY--VPVRIRDPGSPTDESRGLKAIQV 684
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS--------RNARRGMSFLEPGEVP 229
++G H + L++ G G GQLG T S+ RN P +
Sbjct: 685 SAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPD------SPTDES 738
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ K I +++ + S G + A+G N+Y QLG+ +++ + ++ F P ++ +
Sbjct: 739 MGLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAF--PVRVRDPA 796
Query: 290 DK-------KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPI--- 338
+ K +++G HS+A+ S+G YA+G + G+LG +S+ + P P+
Sbjct: 797 NPSETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVR 856
Query: 339 ----PSLQDKTI--TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
P+ K + T ++ G S A+ S+G YGWG QLGN + D
Sbjct: 857 DPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSY------- 909
Query: 393 AFGRHDYGRLGLKNVSEPVTEPT-PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
V PV +P P + + T I+ G S A+ SEG +Y WG
Sbjct: 910 --------------VPVPVRDPANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNG 955
Query: 452 GYQLGNGKEDDILEPMKI 469
+LG+G + L P+ +
Sbjct: 956 NGRLGDGTTNGKLAPVSV 973
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 161/357 (45%), Gaps = 38/357 (10%)
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN 117
+RKT+ + V+V GG H++ + DG Y WG N+ G LG + +S ++P +
Sbjct: 609 DRKTYPDLPADFTYVQVSAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNS-YVPVRIR 667
Query: 118 LPK---------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLK 167
P KA+Q+SAG HS+AL DG YAWG D +G +G G + +P
Sbjct: 668 DPGSPTDESRGLKAIQVSAGYWHSLALSNDGYAYAWG--YDWYGQLGNNTSGSSEYSPFP 725
Query: 168 L----------ESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG----RITQRSA 212
+ ES+ +++++G H + L S G + G GQLG I++ S
Sbjct: 726 ILVRNPDSPTDESMGLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSH 785
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
S R P E + K I ++ + S G A+G N QLG
Sbjct: 786 SAFPVRVRDPANPSETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDS 845
Query: 273 KSGNTCFFTPHLIKSLSDK----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN- 327
SGN + +D K T +++G HSLA+ S+G Y +G + YG+LG
Sbjct: 846 YSGNPVPVHVRDPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTK 905
Query: 328 ----VSEPVTEPT-PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
V PV +P P + + T I+ G S A+ SEG +Y WG +LG+G
Sbjct: 906 TDSYVPVPVRDPANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDG 962
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 66/297 (22%)
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-- 287
+K I TG ++ + S G+ A+G N Y QLG+ + N +TP +K+
Sbjct: 556 IKFNQISSSNTGSFSLAVGSDGNAYAWGDNTYGQLGDG------TANNSRYTPIRVKTPD 609
Query: 288 -------LSDKKFTMLASGQHHSLALNSEGKIYAFGR------------HDYGRLGLKNV 328
+D + +++G HSLA+ S+G YA+G + Y + +++
Sbjct: 610 RKTYPDLPADFTYVQVSAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDP 669
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
P E + ++Q ++ G S A+ ++G Y WG QLGN
Sbjct: 670 GSPTDESRGLKAIQ------VSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTS------- 716
Query: 389 GKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
G +Y + +N P E S+ KTI ++ GN S A+DS G +Y
Sbjct: 717 ------GSSEYSPFPILVRNPDSPTDE-----SMGLKTI-QVSAGNLHSLALDSNGYVYA 764
Query: 447 WGMGNGYQLGNGKEDDILE------PMKIEGKQLNNYT-----VLQVASGGQHSVIL 492
WG + QLG+ +DI E P+++ + T +Q+++G HS+ +
Sbjct: 765 WGWNSYGQLGD-NTNDISEDSHSAFPVRVRDPANPSETNMGLKAIQISAGYDHSMAV 820
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3953 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4011
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4012 -YGAGGRLGVGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4069
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4070 GKLGHGNRSPCDRP--RVIESLRGTEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4121
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4122 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4174
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4175 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4225
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4226 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCS 4266
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4267 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4321
Query: 497 P 497
P
Sbjct: 4322 P 4322
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2959 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3016
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3017 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3076 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3126
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3127 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3179
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3180 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3231
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3232 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3271
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3272 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3321
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3069
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3070 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3124
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3125 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3184
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3185 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3229
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3230 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3281
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3282 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 154/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP+ +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3951 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 4009
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4010 TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4069
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4070 --GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4124
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4125 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4177
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4178 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4230
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4231 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG---- 4285
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4286 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2951 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3005
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3006 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3065
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3066 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3123
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3124 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3170
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3171 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3223
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3224 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3282
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3283 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3315
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3316 GSSHSVA 3322
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 185/416 (44%), Gaps = 85/416 (20%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVME--RKTFAL 64
Q VF+ AV + + G V + G+ + G+LG G P V+E R T
Sbjct: 4036 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT--- 4092
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK-- 120
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V +
Sbjct: 4093 -----EVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGH 4144
Query: 121 KAVQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVK 176
+ V ++ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK
Sbjct: 4145 RVVDVACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4202
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHI 235
+ G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4203 VECGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKV 4252
Query: 236 DDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKF 293
+ TG ++ S G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4253 IAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKV 4304
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD---------- 343
+A G H+LA ++ A G+L PV P LQ+
Sbjct: 4305 NRVACGSAHTLAWSTSKPASA------GKL-------PVQVPMEYNHLQEIPIIALRNRL 4351
Query: 344 ---KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
I+ + C C+ D EG L G+G +G IL S+GK AF +
Sbjct: 4352 LLLHHISELFC-PCIPM-FDLEGSLDETGLGPS--VGFDTLRGILISQGKEAAFRK 4403
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP+ +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2957 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3009
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3054
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3055 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3104
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3105 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3162
Query: 490 VILA 493
LA
Sbjct: 3163 QTLA 3166
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G +V LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSVALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G SVAL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSVALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPSALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ V LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4014 -YGAGGRLGVGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4072 GKLGHGNRSPCDRP--RVIESLRGTEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4124 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4177 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4227
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4228 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCS 4268
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4269 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4323
Query: 497 P 497
P
Sbjct: 4324 P 4324
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3233
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3234 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3274 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 154/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP+ +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3953 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 4011
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4012 TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4072 --GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4126
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4127 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4180 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4232
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4233 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG---- 4287
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4288 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 177/393 (45%), Gaps = 81/393 (20%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVME--RKTFALVEDLDNVVEVVVGGMHTVCLTED 87
G V + G+ + G+LG G P V+E R T VV+V GG H+ C+T
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT--------EVVDVAAGGAHSACVTAA 4112
Query: 88 GKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTV 141
G +YTWG +G GR DSE P+ V + + V ++ +GD+ ++ L +D TV
Sbjct: 4113 GDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTV 4169
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCP 199
++WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G
Sbjct: 4170 WSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFG 257
+ +LG + + RR P +V L+ K + + TG ++ S G + +G
Sbjct: 4228 DYHRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277
Query: 258 LNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
N+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++ A
Sbjct: 4278 DNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASA-- 4327
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQD-------------KTITSIACGNCVSFAIDSEG 363
G+L PV P LQ+ I+ + C C+ D EG
Sbjct: 4328 ----GKL-------PVQVPMEYNHLQEIPIIALRNRLLLLHHISELFC-PCIPM-FDLEG 4374
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
L G+G +G IL S+GK AF +
Sbjct: 4375 SLDETGLGPS--VGFDTLRGILISQGKEAAFRK 4405
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP+ +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G +V LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSVALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G SVAL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSVALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPSALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ V LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC +EDG+VY
Sbjct: 4216 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCSEDGEVY 4274
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4275 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
Length = 2434
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 189/423 (44%), Gaps = 54/423 (12%)
Query: 86 EDGKVYTWGC--NDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVY 142
E+G W C N G LG + + +L +K + QI AG+ H++AL DG V
Sbjct: 429 EEGDREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVL 488
Query: 143 AWGSFRDSHGSMGLKGEG----IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
G + +G G G + + P ++ V +G +H +++T G T G
Sbjct: 489 TCGY--NDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGY 546
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI------SSKGS 252
+GQLG +AS + + + LE V L V Y+T + S +
Sbjct: 547 NYRGQLGH--GNTASESVPKIVRSLENRIVRL-------VSCSYYHTVMACEEDGSGQQY 597
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ FG N+Y QLG DS +K P ++++ D+ +A GQ+H++ + + GK
Sbjct: 598 LYTFGRNDYGQLGHNDSIDRK-------VPQHVEAMGDQHVVSVACGQYHTMVVTATGKA 650
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+AFG++DYG+LG+ ++ + L+ I CG + + S L+ +G +
Sbjct: 651 FAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRND 710
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
QLG G+ + + ++ R Y RL I L+ K I ACG
Sbjct: 711 YGQLGLGRANASSTANLQLQQ-QRFSYARL--------------IEELEGKDIVRFACGC 755
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE---GKQLNNYTVLQVASGGQHS 489
+ A+ GV+Y +G N QLG G ++ + P I+ GK+ V VA+G H+
Sbjct: 756 YHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKR-----VALVAAGFYHT 810
Query: 490 VIL 492
V+L
Sbjct: 811 VVL 813
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 171/394 (43%), Gaps = 58/394 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYT 92
G V +CGQ G+LG G D RK+F +E L ++++ G HT+ LT DGKV T
Sbjct: 431 GDREVWSCGQNSYGELGHG-DTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLT 489
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK------KAVQISAGDSHSVALLEDGTVYAWG- 145
G ND G G +G + + +PK V G H++ + DG G
Sbjct: 490 CGYNDNGQCG---QGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGY 546
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN------LLTAGCP 199
++R G E + K LE + IV++ S + + ++ + L T G
Sbjct: 547 NYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRN 604
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG S R P V + +H+ V G Y+T +++ G AFG
Sbjct: 605 DYGQLGH--NDSIDRKV--------PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFG 654
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLASGQHHSLALNSEGKIYAFG 316
N+Y QLG E Q P +++ L + + G +H++ L S ++AFG
Sbjct: 655 KNDYGQLGIDSMENQ-------LVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFG 707
Query: 317 RHDYGRLGLKNVSEPVTE-----------PTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
R+DYG+LGL + T I L+ K I ACG + A+ GV+
Sbjct: 708 RNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVM 767
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
Y +G N QLG G ++ ++Y F D+
Sbjct: 768 YVFGRNNHGQLGTGDTNE------RVYPFPIDDF 795
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 160/339 (47%), Gaps = 34/339 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV---GGMHTVCLTEDGKV 90
T G VLTCG D GQ G G + + DN + V G HT+ +T DG+
Sbjct: 482 TVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRA 541
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQ-ISAGDSHSV-ALLEDGT----VYA 143
T G N G LG SE +P+ V +L + V+ +S H+V A EDG+ +Y
Sbjct: 542 ATCGYNYRGQLG-HGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYT 600
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+G R+ +G +G +K P +E++ +V +A G H +++T+ G G +
Sbjct: 601 FG--RNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDY 658
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTFISSKGS-ILAFGL 258
GQLG + + L P +V L++ ++ G Y+T + G+ + AFG
Sbjct: 659 GQLGIDSMENQ----------LVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGR 708
Query: 259 NNYSQLGEADSEVQKSGN-----TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
N+Y QLG + + N F LI+ L K A G +H++A++ G +Y
Sbjct: 709 NDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMY 768
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
FGR+++G+LG + +E V P PI K + +A G
Sbjct: 769 VFGRNNHGQLGTGDTNERVY-PFPIDDFVGKRVALVAAG 806
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 35/383 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTW 93
G V G GD G+LG D + +LV L N + V GG HT + DG V+TW
Sbjct: 7 GKVACWGNGDYGRLG--HDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGSVFTW 64
Query: 94 GCNDEGALGREAEGDSEFI---PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G ND G LG EF PQ V LP+ AVQ++ G SH++ L E +V+A GS +
Sbjct: 65 GLNDHGQLGHYTH--QEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTESSSVWAVGS--NM 120
Query: 151 HGSMGLKGEGIQK-TPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
HG +GL+ G Q+ P +++ + G I+ IA+GA H + +++ G L T G +G LG
Sbjct: 121 HGQLGLRRRGGQEWVPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGHG 180
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFG-LNNYSQLG 265
A+ ++ LK + G+ N+ + + G+ +G S L
Sbjct: 181 RSSFAATQDESAPRLVK----KLKGIMVQSAAGGLMNSGCVDANGAAYFWGPYLRQSPLT 236
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+A +E + P ++ + + K LA G H +AL G++ +G +YG LGL
Sbjct: 237 KAATEANE--------PEVLSGVQNVK--QLALGGRHLVALTHGGRVATYGTSEYGLLGL 286
Query: 326 KNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ P +PT IP D ++ +A G S + S+G L WG G +G D
Sbjct: 287 GSSDPPSPFQPTLIP---DVSLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGSESGLFPDQ 343
Query: 385 LNSEGKIYAFGRHDYGRLGLKNV 407
++ G++ DY + NV
Sbjct: 344 TSAGGQLGHDNEFDYWKPTPGNV 366
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 134/337 (39%), Gaps = 61/337 (18%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+ +A G H + G++ T G + GQLG T + S EP EV L
Sbjct: 42 FLSVACGGAHTAAVAVDGSVFTWGLNDHGQLGHYTHQE--------FSMQEPQEVFLPEA 93
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ + F++ S+ A G N + QLG Q+ + P ++ L K
Sbjct: 94 AVQVAMGHSHTLFLTESSSVWAVGSNMHGQLGLRRRGGQE------WVPRRVQDLVGTKI 147
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK----TITSI 349
+A+G HSLA++++G+++ +G G LG S T+ P L K + S
Sbjct: 148 IGIAAGAQHSLAVSADGELFTWGGDTRGCLGHGRSSFAATQDESAPRLVKKLKGIMVQSA 207
Query: 350 ACGNCVSFAIDSEGVLYGWG-----------------------MGNGYQLG-NGKEDDIL 385
A G S +D+ G Y WG + N QL G+ L
Sbjct: 208 AGGLMNSGCVDANGAAYFWGPYLRQSPLTKAATEANEPEVLSGVQNVKQLALGGRHLVAL 267
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
G++ +G +YG LGL + P +PT IP D ++ +A G S + S+G L
Sbjct: 268 THGGRVATYGTSEYGLLGLGSSDPPSPFQPTLIP---DVSLEQVAAGWQHSAGVTSDGQL 324
Query: 445 YGWGMGN---------------GYQLGNGKEDDILEP 466
WG G G QLG+ E D +P
Sbjct: 325 LTWGWGGSVGSESGLFPDQTSAGGQLGHDNEFDYWKP 361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 112/298 (37%), Gaps = 44/298 (14%)
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTFISSKGSILA 255
C G GR+ A S P VP + +K + G + ++ GS+
Sbjct: 11 CWGNGDYGRLGHDCAK-------SLAVPSLVPALINQKFLSVACGGAHTAAVAVDGSVFT 63
Query: 256 FGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+GLN++ QLG E F P + +A G H+L L ++A
Sbjct: 64 WGLNDHGQLGHYTHQEFSMQEPQEVFLP--------EAAVQVAMGHSHTLFLTESSSVWA 115
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
G + +G+LGL+ P + L I IA G S A+ ++G L+ WG
Sbjct: 116 VGSNMHGQLGLRRRGGQEWVPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRG 175
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
LG+G+ +A ++ + P + L+ + S A G
Sbjct: 176 CLGHGRSS---------FA-------------ATQDESAPRLVKKLKGIMVQSAAGGLMN 213
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S +D+ G Y WG + EP + G Q V Q+A GG+H V L
Sbjct: 214 SGCVDANGAAYFWGPYLRQSPLTKAATEANEPEVLSGVQ----NVKQLALGGRHLVAL 267
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
GK+ +G DYGRLG + ++ + P+ +P+L ++ S+ACG + A+ +G ++ WG
Sbjct: 7 GKVACWGNGDYGRLG-HDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGSVFTWG 65
Query: 449 MGNGYQLGN--GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ + QLG+ +E + EP ++ +QVA G H++ L +
Sbjct: 66 LNDHGQLGHYTHQEFSMQEPQEV----FLPEAAVQVAMGHSHTLFLTE 109
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 189/431 (43%), Gaps = 60/431 (13%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQIS 126
++V G+ +V T KV+ WG ND+ LG +G +P +T++ VQ++
Sbjct: 2946 SLVRKKTSGLESVA-TIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVA 3002
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGAD 182
G A+ +G VYA G + +GL G P ++ ++S V K+A SG
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSS-GTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H + LT G + + G + G+LG ++ + + +E LK K I D+ G
Sbjct: 3062 HAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGS 3112
Query: 243 -YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ I+S G + ++GL Y +LG D NT P ++K L + +A G
Sbjct: 3113 SHSAAITSSGELYSWGLGEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSR 3165
Query: 302 --HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+LAL EG ++++G D+G+LG + SE P I L + + I CG S A+
Sbjct: 3166 DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
GV++ WG G DY RLG V +P +
Sbjct: 3225 TKSGVVWTWGKG--------------------------DYFRLG-HGTDVHVRKPQVVEG 3257
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
L+ K I +A G A+ G +Y WG + Q GNG +P ++G L +
Sbjct: 3258 LRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKI 3315
Query: 480 LQVASGGQHSV 490
+VA G HSV
Sbjct: 3316 TRVACGSSHSV 3326
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 127/253 (50%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++SL+ + +A S HH LAL + G+++++G D GRLG + + P+
Sbjct: 479 NSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I +L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I ++CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGEKVID 714
Query: 482 VASGGQHSVILAK 494
V +G H + L +
Sbjct: 715 VVAGSTHCLALTE 727
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4016 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4074 GKLGHGNRSPCDRP--RVIESLRGIEV------VDIAAGGAHSACITAAGDLYTWGKGRY 4125
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4126 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4179 YGKLG-RGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4229
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4230 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4270
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4271 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4325
Query: 497 P 497
P
Sbjct: 4326 P 4326
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 61/351 (17%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGA 181
QI+ + + L +G VY D G P ++S++ IVKIA+ +
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDILG------------PQLVQSLASRNIVKIAAHS 503
Query: 182 D--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
D H++ L + G + + GC + G+LG + + +S L + KH+ +
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQA---GKHVVHIA 558
Query: 240 TG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA- 297
G Y+ I+++G + +G NY +LG SE Q P L+ L K ++
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDVSC 611
Query: 298 -SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
SG +LA+ G+++++G DYG+LG + S+ P I LQD I ++CG+ S
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVSCGSQFS 670
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEGK 390
A+ +G +Y WG G+ +LG+G E+ + L + +
Sbjct: 671 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730
Query: 391 IYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+Y++G +D + +++P +PT +P L K I IACG SFA S
Sbjct: 731 VYSWGSNDQCQHFDTLRITKP--DPTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 3015 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y+WG
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL----- 3129
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3190 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3234
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3235 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWG 3286
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S +
Sbjct: 3287 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVS 3327
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 159/366 (43%), Gaps = 36/366 (9%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+V T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2956 ESVATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3010
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + N K V + +G H++AL DG
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDG 3070
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H +TS G L + G
Sbjct: 3071 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3128
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSI 253
E G+LG + L+P V + H + V G + ++ +G +
Sbjct: 3129 LGEYGRLGHGDNTTQ----------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3178
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G ++ +LG SE C P I+ L+ + + G SLAL G ++
Sbjct: 3179 FSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G+ DY RLG V +P + L+ K I +A G A+ G +Y WG +
Sbjct: 3232 TWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3290
Query: 374 YQLGNG 379
Q GNG
Sbjct: 3291 GQQGNG 3296
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V IA+G H +T+ G+L T G +G+ GR+
Sbjct: 4074 --GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWG---KGRYGRL 4128
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 4129 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4182 LGRGGSDGCK-------VPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4235 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4289
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4290 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 47/290 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV++ GG H+ C+T G
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDIAAGGAHSACITAAGD 4116
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR GDSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4117 LYTWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4174 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4232 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4281
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++
Sbjct: 4282 DEGQLGDGTTNAIQR--------PRLVAALQGKKINRVACGSAHTLAWST 4323
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L G+V++WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLG---HGDTVPLEEPKMISALSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L +K
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGEK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ +G H LAL + ++Y++G +D + +++P +PT +P L K I IAC
Sbjct: 712 VIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRITKP--DPTALPGLDSKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 3015 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3075 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3107
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 3108 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 3165
Query: 488 HSVILA 493
+ LA
Sbjct: 3166 DAQTLA 3171
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G +V LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-IVKVSCGSQFSVALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L +K + + AG +H +AL ED VY+WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTEDGKV 90
G V + G GD G+LG G D + + ++ L +VV + G ++ +T +G++
Sbjct: 515 GEVFSWGCGDGGRLGHG-DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWGS 146
YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++WG
Sbjct: 574 YTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+G +G G KTP +E + IVK++ G+ V LT G + + G + +L
Sbjct: 633 --GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRL 690
Query: 205 GRITQ 209
G T+
Sbjct: 691 GHGTE 695
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLD--NVVEVVVGG--MHTVCLTEDG 88
T G + T G+G+ G+LG G E +T LV L V++V G T+ +TE+G
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENG 625
Query: 89 KVYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+V++WG D G LGR + + I + +L V++S G SVAL +DG VY+WG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DIVKVSCGSQFSVALTKDGQVYSWG 683
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G E + P LE + G ++ + +G+ H + LT + + G +Q Q
Sbjct: 684 --KGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ 741
Query: 204 ---LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
RIT+ +P +P L KHI + G +F S S + GL
Sbjct: 742 HFDTLRITKP-------------DPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4218 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4276
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4277 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 181/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ +A+ DG +YA G
Sbjct: 3704 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATG 3762
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3763 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3820
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3821 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 3872
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 3873 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3925
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3926 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3976
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3977 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4017
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4018 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4072
Query: 497 P 497
P
Sbjct: 4073 P 4073
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2712 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2769
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2770 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 2829 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2879
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 2880 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2933 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2984
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2985 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3025 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3074
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D RLG + + P+
Sbjct: 455 NSDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGD-TVPLE 513
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 514 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 573
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 574 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 632
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 633 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 690
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 691 VAAGSTHCLALTE 703
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2822
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 2877
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2878 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2937
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 2938 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2982
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2983 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3034
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3035 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3702 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYA 3760
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3761 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3820
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3821 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 3875
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 3876 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3928
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3929 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3981
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3982 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4036
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4037 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2704 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2758
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2759 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 2818
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 2819 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2876
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 2877 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2923
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 2976
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 2977 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3035
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3036 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3068
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3069 GSSHSVA 3075
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 3810 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 3863
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 3864 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 3920
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 3921 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3978
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 3979 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4028
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4029 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4080
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4081 AQVPMEYNHL 4090
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 46/320 (14%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL------P 119
NVV++ G H + L G+VY+WGC D LG GD+ + P+ ++
Sbjct: 471 NVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLG---HGDTVPLEEPKVISAFSGKQAG 527
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 528 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 585
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 586 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 634
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 635 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 687
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 688 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 745
Query: 352 GNCVSFAIDSEGVLYGWGMG 371
G S A S Y W MG
Sbjct: 746 GPAQSSAGSSX---YEWSMG 762
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2710 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 2807
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 2808 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 2857
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 2858 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 2915
Query: 490 VILA 493
LA
Sbjct: 2916 QTLA 2919
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 598 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 651
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 652 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 711
Query: 146 S 146
S
Sbjct: 712 S 712
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 544 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 602
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 603 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 659
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 660 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 717
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 3965 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4023
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4024 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD +LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 491 GEVYSWGCGDGRRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 548
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 549 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 607
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 608 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 665
Query: 204 LGRITQ 209
LG T+
Sbjct: 666 LGHGTE 671
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 170/362 (46%), Gaps = 52/362 (14%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS HG +GL G E TP +++ + + + A G H ++LT G L T
Sbjct: 3 LYCWGS--TVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG T ++ + F+ L+ + V G+ ++ +++ G + +
Sbjct: 61 GNNDHGQLGHDTNNLPNKRPQ----FISA----LENYIVTQVSCGLSHSLALTNWGQLFS 112
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG V + P +IKS++ K ++ G H LAL + G+++A+
Sbjct: 113 WGSNATGQLGHDLDMVS------YPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAW 166
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G ++YG+LGL + V T + SL I IACG SFA+ G ++GW
Sbjct: 167 GANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW------- 219
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
G++ +G+LGL ++ + PT + +L+ + I+CG+ S
Sbjct: 220 -------------------GKNTFGQLGLNDL-DSRCYPTQLKTLRSLGVRYISCGDDFS 259
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ EG ++ G+G QLG+G ++IL M E L + Q+A G +H++
Sbjct: 260 VFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFE---LMGSKITQIACGRKHTLAFVP 316
Query: 495 PK 496
+
Sbjct: 317 SR 318
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 32/331 (9%)
Query: 48 GQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+LGLG +E + ++D NV + GG HT+ LT+DGK+YT G ND G LG
Sbjct: 12 GELGLGG--IEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLG 69
Query: 103 REAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG 160
+ PQ ++ + + Q+S G SHS+AL G +++WGS ++ G +G +
Sbjct: 70 HDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGS--NATGQLGHDLDM 127
Query: 161 IQ-KTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+ P ++S++ +V+I+ G H + LT+ G L G E GQLG T A
Sbjct: 128 VSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTAT 187
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
S +P I + G ++F +S G+I +G N + QLG D + +
Sbjct: 188 LVKSL---AGIP-----IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD-----S 234
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
C+ P +K+L ++ G S+ L EG ++ G +G+LG + P
Sbjct: 235 RCY--PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL-PR 291
Query: 337 PIPSLQDKTITSIACGNCVSFA-IDSEGVLY 366
+ L IT IACG + A + S G +Y
Sbjct: 292 MVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G + TCG D GQLG + + K + L+N V +V G H++ LT G+++
Sbjct: 52 TKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLF 111
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG N G LG + + S P+ + K VQIS G SH +AL G ++AWG+ +
Sbjct: 112 SWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGA--N 169
Query: 150 SHGSMGLKGEGIQKTPLK--LESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +GL G +K P ++S++G I IA G +H ++ G + G GQLG
Sbjct: 170 EYGQLGLGTTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228
Query: 206 --------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
TQ R+ G+ ++ G DD ++ F++ +G + G
Sbjct: 229 LNDLDSRCYPTQLKTLRSL--GVRYISCG---------DD-----FSVFLTQEGGVFTCG 272
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIY 313
L + QLG GN P ++ L K T +A G+ H+LA S GK+Y
Sbjct: 273 LGTFGQLGHG-----THGNEIL--PRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 183/413 (44%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ AVQ++ G A+ +G VYA G
Sbjct: 1795 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNAVQVAGGSKSLFAVTVEGKVYACG 1852
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT+ G + + G +
Sbjct: 1853 EA--TNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGD 1910
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK + I D+ G ++ ++S G + +GL
Sbjct: 1911 DGKLGHFSRXNCDKP-----RLIEA----LKSRRIRDIACGSSHSAALTSSGELYTWGLG 1961
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 1962 EYGRLGHGD-------NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGD 2014
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2015 GDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 2067
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 2068 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2106
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 2107 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 2157
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFS 1905
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L + ++ I+ G SHS AL G +Y WG
Sbjct: 1906 WGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGL----- 1960
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V +V++A G+ + LT G + + G + G+L
Sbjct: 1961 GEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2020
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR + Q N +G+ +E G ++ ++ G + +G
Sbjct: 2021 GRGGSEGCNVPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2065
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2066 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 2117
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2118 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 34/240 (14%)
Query: 281 TPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
TP L++S+ +A SG H LAL+SEG++Y++G + G+LG N S P P I
Sbjct: 2863 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVI 2921
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
SL+ + +A G S + + G LY WG G +LG+ +D
Sbjct: 2922 ESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRV 2981
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L + ++++G DYG+LG + S+ P + +L + C
Sbjct: 2982 VDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG-RGGSDGCKVPMKVDALTGLGAVKVEC 3040
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ G +Y WG G+ ++LG+G +D + P +++G L V+ +A+G H V
Sbjct: 3041 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 3098
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 182/434 (41%), Gaps = 82/434 (18%)
Query: 106 EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGIQKT 164
E D + + Q +N +SAG S GTVY WG + G +G ++G + K
Sbjct: 2764 EQDEQLV-QWMNRRPDDWTLSAGGS--------GTVYGWG--HNHRGQLGGVEGAKV-KV 2811
Query: 165 PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF 222
P E+++ + ++ G +T+ G L G G+LG S S
Sbjct: 2812 PTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVS--------- 2862
Query: 223 LEPGEVPLKRKHIDDVFT--------GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
P + I VF G + +SS+G + ++G +LG +
Sbjct: 2863 -----TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR----- 2912
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
+ C P +I+SL + +A+G HS + + G +Y +G+ YGRLG + SE +
Sbjct: 2913 -SPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD-SEDQLK 2969
Query: 335 PTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------- 384
P + +LQ + +ACG + + + + ++ WG G+ +LG G D
Sbjct: 2970 PKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDA 3029
Query: 385 ------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
L G +Y +G+ DY RLG + V P + LQ K +
Sbjct: 3030 LTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVI 3088
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVA 483
+IA G+ +G +Y WG + QLG+G + I P ++GK++N +VA
Sbjct: 3089 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVA 3143
Query: 484 SGGQHSVILAKPKP 497
G H++ + KP
Sbjct: 3144 CGSAHTLAWSTSKP 3157
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 173/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ N V+V G
Sbjct: 1787 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFA 1841
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + +P+ V K V + +G H+ AL DG
Sbjct: 1842 VTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADG 1901
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 1902 KVFSWGEGDD--GKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG 1959
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 1960 LGEYGRLGHGDNTTQ-------------LKPKMVKVLVGHRVVQVACGSRDAQTLALTDE 2006
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 2007 GLVFSWGDGDFGKLGRGGSE------GC-NVPQNIERLNGQGVCQIECGAQFSLALTKSG 2059
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 2060 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 2118
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 2119 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 2151
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 2152 GSSHSVA 2158
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 172/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G V G GQLG G + + K E L + ++GG T+ +T DGK+Y
Sbjct: 2786 GSGTVYGWGHNHRGQLG-GVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYA 2844
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 2845 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2904
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G L T G +G+ GR+
Sbjct: 2905 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWG---KGRYGRL 2959
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 2960 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGK 3012
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P + +L+ + G S+AL G +Y +G+ DY RL
Sbjct: 3013 LGRGGSDGCK-------VPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3065
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3066 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 3120
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 3121 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3151
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 177/391 (45%), Gaps = 77/391 (19%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 2894 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGG 2947
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V ++ +GD+ ++ L ED TV++
Sbjct: 2948 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWS 3004
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K+++++G+ VK+ G+ V LT G + T G +
Sbjct: 3005 WGD--GDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDY 3062
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 3063 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3112
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++ A
Sbjct: 3113 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASA---- 3160
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQD-------------KTITSIACGNCVSFAIDSEGVL 365
G+L P P LQD ++ + C C+ D EG L
Sbjct: 3161 --GKL-------PAQVPMEYSHLQDLPVVALRNRLLLLHHVSELFC-PCIPM-FDLEGAL 3209
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
G+G +G IL S+GK AF +
Sbjct: 3210 DEAGLGPS--VGFDTLRGILISQGKEVAFRK 3238
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 1793 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNAVQVAGGSKSLFAVTVE 1845
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V P + +L + +A +
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHS---------------- 1889
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L ++GK++++G D G+LG + +P I +L+ + I IA
Sbjct: 1890 --------GGRHATALTADGKVFSWGEGDDGKLGHFSRXN-CDKPRLIEALKSRRIRDIA 1940
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 1941 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLVGHRVVQVACGSRDA 1998
Query: 490 VILA 493
LA
Sbjct: 1999 QTLA 2002
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 3049 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 3107
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 3108 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3151
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 125/241 (51%), Gaps = 35/241 (14%)
Query: 281 TPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTP 337
TP LI++L T +A SG H LAL S G ++++G D G+LG + S+ + E P
Sbjct: 3694 TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLG--HGSKALCERPKL 3751
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------ 385
I SL+DK + S+ACG S I + G LY WG G +LG+G +D L
Sbjct: 3752 IESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHN 3811
Query: 386 ----------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ +G ++++G DYG+LG + S+ P I SLQ+ + +
Sbjct: 3812 VLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLG-RGGSDGCKFPQKIDSLQNAGVIKVE 3870
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ + GV+Y WG G+ ++LG+G ED + P ++G L V+QVA G H
Sbjct: 3871 CGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGA-LQGKRVIQVAVGSLHC 3929
Query: 490 V 490
V
Sbjct: 3930 V 3930
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 173/413 (41%), Gaps = 60/413 (14%)
Query: 87 DGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
+ KV+ WG ND+ LG + +F NL K + I+ G + DG V+A
Sbjct: 2651 ECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNL--KPMNIAGGSKSLFIVSHDGKVFA 2708
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPEQ 201
G + +G Q PL S I K+A SG H + LT G + + G E
Sbjct: 2709 CGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGED 2768
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
G+LG + +S+ P V LK K I DV G ++ ++S G + +G
Sbjct: 2769 GKLGHGNK----------ISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSG 2818
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D+ Q P +++LS ++ +A G +LAL +Y++G
Sbjct: 2819 EYGRLGHGDNVPQ-------LKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGD 2871
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG K S+ + P + +L + + + CG S A+ G ++ WG G+ ++LG
Sbjct: 2872 GDFGKLG-KGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLG 2930
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+G + V P + L DK + ++ G A
Sbjct: 2931 HGSDSH---------------------------VRWPQVVEELADKNVIQVSVGALHCIA 2963
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P + G + + VA G HSV
Sbjct: 2964 VTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRGLE----AITNVACGSSHSV 3012
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 165/338 (48%), Gaps = 34/338 (10%)
Query: 37 GVVLTCGQGDTGQLGLGP--DVMERKTFA-LVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V CG+G G+LGLG +V + K L V V GG H + LT DG+V++W
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSW 2763
Query: 94 GCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ++G LG + D + +++ K+ ++ G SHS A+ G +Y WGS +
Sbjct: 2764 GEGEDGKLGHGNKISYDRPKLVESLKC-KRIRDVACGSSHSAAVTSSGELYTWGS--GEY 2820
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G Q P ++ ++S +V++A G+ + LT R + + G + G+LG
Sbjct: 2821 GRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLG-- 2878
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGE 266
+ G S + E L + + V G ++ +S G + +G +Y +LG
Sbjct: 2879 ------KGGSDGSSLPQNVET-LNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGH 2931
Query: 267 -ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+DS V+ P +++ L+DK ++ G H +A+ G++YA+G +D+G+ G
Sbjct: 2932 GSDSHVR--------WPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGN 2983
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
N + +P + L+ IT++ACG+ S A S G
Sbjct: 2984 GNTTVN-RKPAIVRGLE--AITNVACGSSHSVAWSSTG 3018
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 69/369 (18%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--V 71
Q V VT AV + T G V + G+GD G+LG G + + L+E L + V
Sbjct: 3702 QHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERP-KLIESLRDKHV 3760
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS----- 126
V V GG H+ C+T G++YTWG +G GR GDSE + PKK +++
Sbjct: 3761 VSVACGGAHSACITASGELYTWG---KGRYGRLGHGDSEDQLK----PKKVEELAGHNVL 3813
Query: 127 -----AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIAS 179
+GD+ ++ + DG V++WG +G +G G K P K++S+ +G++K+
Sbjct: 3814 DVACGSGDAQTLCVSRDGLVWSWGD--GDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVEC 3871
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR-NARRGMSFLEPGEVPLKRKHIDDV 238
G+ V LT+ G + T G + +LG ++ R A +G L+ K + V
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQG---------ALQGKRVIQV 3922
Query: 239 FTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTML 296
G ++ + G + +G N+ QLG+ + +Q+ P L+ SL KK +
Sbjct: 3923 AVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQR--------PKLVASLKGKKMNRV 3974
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIP----SLQDKTITSIAC 351
A G H+++ ++ K+ + VT+ PT IP L+D ++ +
Sbjct: 3975 ACGSAHTVSWSTS----------------KSAHKTVTQLPTQIPLEYDHLKDISMQQLRN 4018
Query: 352 GNCVSFAID 360
C+ F +
Sbjct: 4019 RYCLLFLFN 4027
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 176/410 (42%), Gaps = 60/410 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G GV+ G GQLG G + + KT + + L + V +VGG T+ LT DGKVY
Sbjct: 3617 GSGVIHGWGHNHRGQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYA 3675
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ I ++ V +++G H +AL G V++WG D
Sbjct: 3676 TGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDD 3735
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G + + + P +ES+ +V +A G H +T+ G L T G +G+ GR+
Sbjct: 3736 --GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWG---KGRYGRL 3790
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P +V L ++ DV G +S G + ++G +Y +
Sbjct: 3791 GHGDSEDQ-------LKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGK 3843
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S + C F P I SL + + G S+AL + G +Y +G+ DY RL
Sbjct: 3844 LGRGGS------DGCKF-PQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRL 3896
Query: 324 GLKNVSEPVTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
G + V P + +LQ K + +A G+ A G ++ WG + QLG+G +
Sbjct: 3897 G-HGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTN 3955
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
I P + SL+ K + +ACG+
Sbjct: 3956 AI---------------------------QRPKLVASLKGKKMNRVACGS 3978
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 43/364 (11%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLG--LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
++CK V G D QLG G + E K ++ +L + + G ++ D
Sbjct: 2650 IECK-----VFVWGLNDKDQLGGLKGSKIKEPKFSEVISNL-KPMNIAGGSKSLFIVSHD 2703
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK------KAVQISAGDSHSVALLEDGTV 141
GKV+ G EG GR G S + Q L K V + +G H++AL DG V
Sbjct: 2704 GKVFACG---EGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRV 2760
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCP 199
++WG D G +G + P +ES+ I +A G+ H +TS G L T G
Sbjct: 2761 FSWGEGED--GKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSG 2818
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FISSKGSILA 255
E G+LG + L+P +V L + + V G + ++ + + +
Sbjct: 2819 EYGRLGH----------GDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYS 2868
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G ++ +LG K G+ P +++L+ ++ + G SLAL+ GK++ +
Sbjct: 2869 WGDGDFGKLG-------KGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTW 2921
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G+ DY RLG + S V P + L DK + ++ G A+ G +Y WG + Q
Sbjct: 2922 GKGDYFRLGHGSDSH-VRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQ 2980
Query: 376 LGNG 379
GNG
Sbjct: 2981 QGNG 2984
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 46/282 (16%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
++S G + ++G + +LG + + P LI+SL DK +A G HS +
Sbjct: 3721 LTSSGDVFSWGEGDDGKLGHGSKALCER-------PKLIESLRDKHVVSVACGGAHSACI 3773
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGV 364
+ G++Y +G+ YGRLG + SE +P + L + +ACG + + + +G+
Sbjct: 3774 TASGELYTWGKGRYGRLGHGD-SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGL 3832
Query: 365 LYGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHD 398
++ WG G+ +LG G D L + G +Y +G+ D
Sbjct: 3833 VWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGD 3892
Query: 399 YGRLGLKNVSEPVTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
Y RLG + V P + +LQ K + +A G+ A G ++ WG + QLG+
Sbjct: 3893 YHRLG-HGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGD 3951
Query: 458 GKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G + I P ++GK++N +VA G H+V + K
Sbjct: 3952 GSTNAIQRPKLVASLKGKKMN-----RVACGSAHTVSWSTSK 3988
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+S G + A G +LG S V + +P+ IK ++ + SG H+L
Sbjct: 2699 IVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVA------VHSGGRHAL 2752
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +G+++++G + G+LG N P + SL+ K I +ACG+ S A+ S G
Sbjct: 2753 ALTIDGRVFSWGEGEDGKLGHGN-KISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGE 2811
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDK 423
LY WG G +YGRLG NV P +P + +L +
Sbjct: 2812 LYTWGSG--------------------------EYGRLGHGDNV--PQLKPKQVRALSHE 2843
Query: 424 TITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
+ +ACG + + A+ +Y WG G+ +LG G D P +E LN+ V+Q
Sbjct: 2844 RVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVE--TLNSQQVIQ 2901
Query: 482 VASGGQHSVILAK 494
V G Q S+ L+K
Sbjct: 2902 VECGAQFSLALSK 2914
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 39/237 (16%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G I +G N+ QLG + K+ C +L+ + + G+ AL S+G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATIC-------DALTALRPVQIVGGEQTLFALTSDG 3671
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 368
K+YA G + G +E V+ PT I +LQ +T +A G A+ S G ++ W
Sbjct: 3672 KVYATG-YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSW 3730
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G G+ +LG+G K + E P I SL+DK + S+
Sbjct: 3731 GEGDDGKLGHGS------------------------KALCE---RPKLIESLRDKHVVSV 3763
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
ACG S I + G LY WG G +LG+G +D L+P K+E +L + VL VA G
Sbjct: 3764 ACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVE--ELAGHNVLDVACG 3818
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 160/339 (47%), Gaps = 37/339 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCL 84
TL T G V G G G+LG+G T L+E L +V V V GG H + L
Sbjct: 3663 TLFALTSDGKVYATGYGAGGRLGIG-GTESVSTPTLIETLQHVIVTQVAVNSGGKHCLAL 3721
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVY 142
T G V++WG D+G LG ++ E P+ + K V ++ G +HS + G +Y
Sbjct: 3722 TSSGDVFSWGEGDDGKLGHGSKALCER-PKLIESLRDKHVVSVACGGAHSACITASGELY 3780
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGA-DHFVMLTSRGNLL-TAGC 198
WG R +G +G Q P K+E ++G ++ +A G+ D + SR L+ + G
Sbjct: 3781 TWGKGR--YGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGD 3838
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAF 256
+ G+LG R G F P ++ L+ + V G ++ +++ G + +
Sbjct: 3839 GDYGKLG--------RGGSDGCKF--PQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTW 3888
Query: 257 GLNNYSQLGE-ADSEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHSLALNSEGKIYA 314
G +Y +LG ++ V++ P ++ +L K+ +A G H +A G+++
Sbjct: 3889 GKGDYHRLGHGSEDHVRR--------PQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFT 3940
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+G +D G+LG + + P + SL+ K + +ACG+
Sbjct: 3941 WGDNDEGQLG-DGSTNAIQRPKLVASLKGKKMNRVACGS 3978
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 35/206 (16%)
Query: 27 VPTLKCK---------------TGGGVVLTCGQGDTGQLGLG---PDVMERKTFALVEDL 68
V +LKCK T G + T G G+ G+LG G P + ++ AL
Sbjct: 2785 VESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSH-- 2842
Query: 69 DNVVEVVVGG--MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
+ VV+V G T+ LTE VY+WG D G LG+ D +PQ V ++ +Q
Sbjct: 2843 ERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGK-GGSDGSSLPQNVETLNSQQVIQ 2901
Query: 125 ISAGDSHSVALLEDGTVYAWGS---FRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIAS 179
+ G S+AL ++G V+ WG FR HGS + + P +E ++ +++++
Sbjct: 2902 VECGAQFSLALSKNGKVWTWGKGDYFRLGHGS-----DSHVRWPQVVEELADKNVIQVSV 2956
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLG 205
GA H + +T RG + G + GQ G
Sbjct: 2957 GALHCIAVTDRGEVYAWGDNDHGQQG 2982
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V T G+GD +LG G D R +VE+L NV++V VG +H + +T+ G+VY WG
Sbjct: 2916 GKVWTWGKGDYFRLGHGSDSHVRWP-QVVEELADKNVIQVSVGALHCIAVTDRGEVYAWG 2974
Query: 95 CNDEGALGREAEGDSEF--IPQTVNLPKKAVQISAGDSHSVALLEDGT 140
ND G G G++ P V + ++ G SHSVA GT
Sbjct: 2975 DNDHGQQG---NGNTTVNRKPAIVRGLEAITNVACGSSHSVAWSSTGT 3019
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 177/393 (45%), Gaps = 55/393 (13%)
Query: 140 TVYAWGSFRDS---HGSM---GLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRG 191
TV+ WG+ HGS G++ + +P LE+ G I K+ GA H + G
Sbjct: 6 TVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEG 65
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSK 250
L T G E QLG + ++ R + L+ I D+ G Y+T + +
Sbjct: 66 KLYTWGSNEYHQLGHGSSNQDIQSIPRVVD-------ALRGIKIVDISCGEYHTGAVDEE 118
Query: 251 GSILAFG-----LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM--LASGQHHS 303
G + +G + LG A E + P L+++L D+ + + G+ H+
Sbjct: 119 GKLFTWGWGGSTMKGSGALGHAGGEDES-------IPRLVRTLVDQGVPVKSVECGELHT 171
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
+AL +G+I+A+G +YGRLG S+ P P+ D+ I SI+ G +FAI G
Sbjct: 172 VALTKDGEIWAWGNGEYGRLG-NGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHG 230
Query: 364 VLYGWGMGNGYQLG--NGKEDDILNSE-------------------GKIYAFGRHDYGRL 402
+Y WG+ + QLG G D N E G +A + G++
Sbjct: 231 EVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKM 290
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
+ ++ EP + L+D+TI S+ CG + A+ + G L+ +G G+ LG+G+
Sbjct: 291 FMWG-AKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKT 349
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
L+P+ +E LN Y V+ + G H L KP
Sbjct: 350 QLQPLLVE--SLNRYNVVSMTCGYSHMGALTKP 380
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 42/363 (11%)
Query: 38 VVLTCGQGDTGQLGLGP-------DVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDG 88
V T G G GQLG G E + ++E + N+ ++ G H+ + ++G
Sbjct: 6 TVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEG 65
Query: 89 KVYTWGCNDEGALGR-EAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAW- 144
K+YTWG N+ LG + D + IP+ V+ + K V IS G+ H+ A+ E+G ++ W
Sbjct: 66 KLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWG 125
Query: 145 --GSFRDSHGSMGLKGEGIQKTPLKLESVSG----IVKIASGADHFVMLTSRGNLLTAGC 198
GS G++G G + P + ++ + + G H V LT G + G
Sbjct: 126 WGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGN 185
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
E G+LG AS N EP E ++I + G TF I+ G + ++G
Sbjct: 186 GEYGRLG----NGASDN----FEVPEPVEY-FADENIASISAGRDFTFAITEHGEVYSWG 236
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+N++SQLG N P ++++LS+ +++G H+ A+ ++GK++ +G
Sbjct: 237 INSHSQLGLGGGLTVDYYNMETI-PVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG- 294
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+L L EP + L+D+TI S+ CG + A+ + G L+ +G G+ LG
Sbjct: 295 ---AKLWL--------EPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLG 343
Query: 378 NGK 380
+G+
Sbjct: 344 HGE 346
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 43/276 (15%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G G G G + + R LV+ V V G +HTV LT+DG+++ WG + G LG
Sbjct: 133 GSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLG 192
Query: 103 REAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-- 158
A + E +P+ V + ISAG + A+ E G VY+WG +SH +GL G
Sbjct: 193 NGASDNFE-VPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGI--NSHSQLGLGGGL 249
Query: 159 ----EGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
++ P+ +E++S + ++++G DH +T+ G + G
Sbjct: 250 TVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAK------------- 296
Query: 213 SRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
+LEP E+ LK + I V G Y T +S+ G++ FG + + LG + +
Sbjct: 297 --------LWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERK 348
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
Q P L++SL+ + G H AL
Sbjct: 349 TQ-------LQPLLVESLNRYNVVSMTCGYSHMGAL 377
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 64/414 (15%)
Query: 89 KVYTWGCNDEGALG------REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
+V+ WG ND+ LG + S+F+ Q + I+ G + +G +Y
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLW-----PIHIAGGSKSLFIVSHEGKLY 2949
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPE 200
A G + +G P+ S I K+A SG H + LT G + + G E
Sbjct: 2950 ACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3009
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGL 258
G+LG + ++ +P + L+ K I D+ G ++ I+S G + +GL
Sbjct: 3010 DGKLGHGNR----------LNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGL 3059
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFG 316
Y +LG D+ Q P LIKSL + +A G +LAL EG ++++G
Sbjct: 3060 GEYGRLGHGDNITQ-------LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWG 3112
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
D+G+LG + SE P I L + I CG S A+ G ++ WG G+ ++L
Sbjct: 3113 DGDFGKLG-RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 3171
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G + + V +PT I SL+DK + +A G
Sbjct: 3172 GHGSD---------------------------QHVRKPTVIESLKDKKVIHVAVGALHCL 3204
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ G +Y WG + Q GNG +P + G L + + +VA G HS+
Sbjct: 3205 AVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHG--LEDVHINRVACGSSHSI 3256
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 53/317 (16%)
Query: 163 KTPLKLESVSGI--VKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
+ P ++ +SGI +KIA+ + H++ LT + + G + G+LG +
Sbjct: 502 QCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKE----- 556
Query: 219 GMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
EP + LK K I DV G Y+ IS+ G++ +G NY +LG +E
Sbjct: 557 -----EPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAE------ 605
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
C TP +I +LSD+ +A G H+L + S+GK+Y++G DYG+LG + S+
Sbjct: 606 DCL-TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLG-RGGSDGSKL 663
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P I LQ+ I + CG S A+ +G +Y WG G G++LG+ E++
Sbjct: 664 PRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEEN----------- 712
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
V P + L+D+ + ++ G A+ +G +YGWG Q
Sbjct: 713 ----------------VRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQ 756
Query: 455 LGNGKEDDILEPMKIEG 471
+ + E + +P IE
Sbjct: 757 ICDSSELFVQQPRLIEA 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 109/219 (49%), Gaps = 32/219 (14%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H LAL + ++Y++G D GRLG + S EPT I +L+ K I + CG S AI +
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAISA 584
Query: 362 EGVLYGWGMGNGYQLGNGKEDDIL----------------------------NSEGKIYA 393
G LY WG GN +LG+G +D L S+GK+Y+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYS 644
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G DYG+LG + S+ P I LQ+ I + CG S A+ +G +Y WG G G+
Sbjct: 645 WGDGDYGKLG-RGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGW 703
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+LG+ E+++ P +E L + V+ V+ G H + L
Sbjct: 704 KLGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVLAL 740
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 179/415 (43%), Gaps = 61/415 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V +VGG T+ +T DGKVY
Sbjct: 3868 GSGTIYGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA 3926
Query: 93 WGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
G G DS +P + ++ K + +++G H +AL D VY+WG
Sbjct: 3927 TG-YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G +TP +E++ G I+ IA G H +TS G L T G +G+ GR
Sbjct: 3986 D--GKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG---KGRYGR 4040
Query: 207 ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYS 262
+ + L+P + L + DV G I+ ++ ++G +Y
Sbjct: 4041 LGHGDSEDQ-------LKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYG 4093
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S+ K P I+SL+ + G S+AL G +Y +G+ DY R
Sbjct: 4094 KLGRGGSDGCK-------VPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHR 4146
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG E V P + +LQ K I SIA G+ A EG ++ WG + QLG D
Sbjct: 4147 LG-HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG----D 4201
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
D N+ + P + +LQ K IT++ACG+ + A
Sbjct: 4202 DTTNA-----------------------IQRPRLVSALQGKKITNVACGSAHTLA 4233
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG R L + + V V GG H + LT DGKV++W
Sbjct: 2946 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ++G LG + + P+ + KK I+ G SHS A+ G +Y WG +
Sbjct: 3006 GEGEDGKLGHGNRLNLD-KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWG--LGEY 3062
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G Q P ++S+ G IV++A G+ + LT G + + G + G+LGR
Sbjct: 3063 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR- 3121
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE- 266
S N + L EV + ++ ++ G + +G +Y +LG
Sbjct: 3122 -GGSEGCNIPHNIERLNALEV------VQIECGAQFSLALTKTGEVWTWGKGDYFRLGHG 3174
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+D V+K P +I+SL DKK +A G H LA+ G++YA+G +D+G+ G
Sbjct: 3175 SDQHVRK--------PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG-- 3224
Query: 327 NVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
N + V +P + L+D I +ACG+ S A
Sbjct: 3225 NGTTIVNRKPALVHGLEDVHINRVACGSSHSIA 3257
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 37/292 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G+GD G+LG G + + +T L+E L ++++ GG H+ +T G++YTWG
Sbjct: 3978 VYSWGEGDDGKLGHG-NRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG-- 4034
Query: 97 DEGALGREAEGDSE------FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+G GR GDSE I + V V +GD+ ++ + +D V++WG
Sbjct: 4035 -KGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGD--GD 4091
Query: 151 HGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +G G K P K+ES++ G++K+ G+ V LT G++ T G + +LG T
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGT 4151
Query: 209 QRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG- 265
R P +V L+ K I + TG ++ S +G + +G N+ QLG
Sbjct: 4152 GEHVRR----------PKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGD 4201
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ + +Q+ P L+ +L KK T +A G H+LA ++ A R
Sbjct: 4202 DTTNAIQR--------PRLVSALQGKKITNVACGSAHTLAWSTNNASSACAR 4245
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 160/387 (41%), Gaps = 59/387 (15%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
GT+Y WG + G +G ++G + K P E++S + V++ G +T+ G +
Sbjct: 3870 GTIYGWG--HNHRGQLGGIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA 3926
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G G+LG S VP + I VF K +
Sbjct: 3927 TGYGAGGRLGIGGTDSVL--------------VPTLLESIQHVFIKKIAVNSGGKHCLAL 3972
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
N+ GE D GN TP LI++L + +A G HS A+ S G++Y
Sbjct: 3973 SADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYT 4032
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGN 372
+G+ YGRLG + SE +P I L + +ACG + + I + ++ WG G+
Sbjct: 4033 WGKGRYGRLGHGD-SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 4091
Query: 373 GYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDYGRLGLKN 406
+LG G D L G +Y +G+ DY RLG
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HG 4150
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
E V P + +LQ K I SIA G+ A EG ++ WG + QLG+ + I P
Sbjct: 4151 TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRP 4210
Query: 467 M---KIEGKQLNNYTVLQVASGGQHSV 490
++GK++ N VA G H++
Sbjct: 4211 RLVSALQGKKITN-----VACGSAHTL 4232
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+S +G + A G +LG S V F + ++IK ++ + SG H++
Sbjct: 2941 IVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVA------VHSGGKHAM 2994
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +GK++++G + G+LG N + +P I +L+ K I IACG+ S AI S G
Sbjct: 2995 ALTLDGKVFSWGEGEDGKLGHGNRLN-LDKPKMIEALRSKKIRDIACGSSHSAAITSSGE 3053
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDK 423
LY WG+G +YGRLG N+++ +P I SL
Sbjct: 3054 LYTWGLG--------------------------EYGRLGHGDNITQ--LKPKLIKSLVGH 3085
Query: 424 TITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
I +ACG + + A+ EG ++ WG G+ +LG G + P IE +LN V+Q
Sbjct: 3086 RIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE--RLNALEVVQ 3143
Query: 482 VASGGQHSVILAK 494
+ G Q S+ L K
Sbjct: 3144 IECGAQFSLALTK 3156
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 33/291 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSV 133
G H + LT+D +VY+WG D G LG GD+ + + K + + G ++S
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLG---HGDTSTKEEPTLIQALKGKDIIDVECGGTYSA 580
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGA--DHFVMLTS 189
A+ +G +Y WG R ++G +G TP + ++S I+K+A G+ H + +TS
Sbjct: 581 AISANGALYTWG--RGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITS 638
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFIS 248
+G + + G + G+LGR + + +E L+ I V+ G ++ +S
Sbjct: 639 QGKVYSWGDGDYGKLGR-----GGSDGSKLPRLIE----KLQNVKIVQVYCGAQFSVALS 689
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + +G +LG E N F P +++ L D+K ++ G H LAL
Sbjct: 690 EDGHVYTWGKGEGWKLGHPTEE-----NVRF--PEMVEVLRDRKVVGVSLGVSHVLALTD 742
Query: 309 EGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFA 358
+G++Y +G+++ ++ + SE V +P I +L+ + + + CG SFA
Sbjct: 743 QGEVYGWGKNENKQIC--DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFA 791
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP--DVMERKTFALVEDLDNVVEVVVGGM--HTVCLTEDGK 89
+ G + T G+G+ G+LG G D + + + D +++++V G HT+C+T GK
Sbjct: 583 SANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSD-EHIIKVACGSFYAHTLCITSQGK 641
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
VY+WG D G LGR D +P+ + + K VQ+ G SVAL EDG VY WG
Sbjct: 642 VYSWGDGDYGKLGR-GGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWG-- 698
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ +G E + P +E + +V ++ G H + LT +G + G E Q+
Sbjct: 699 KGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGK 89
C T G V + G GD G+LG G K L+E L NV V+V G +V L+EDG
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGS-DGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGH 693
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
VYTWG + LG E + F P+ V + +K V +S G SH +AL + G VY WG
Sbjct: 694 VYTWGKGEGWKLGHPTEENVRF-PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWG-- 750
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG 173
++ + + E + P +E++ G
Sbjct: 751 KNENKQICDSSELFVQQPRLIEALKG 776
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G D ++ L++ L ++++V GG ++ ++ +G +YTWG
Sbjct: 536 VYSWGNGDGGRLGHG-DTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRG 594
Query: 97 DEGALGREAEGDSEFIPQTVNL--PKKAVQISAGD--SHSVALLEDGTVYAWGSFRDSHG 152
+ G LG D P ++ + ++++ G +H++ + G VY+WG +G
Sbjct: 595 NYGRLGHGTAEDC-LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGD--GDYG 651
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G G K P +E + IV++ GA V L+ G++ T G E +LG T+
Sbjct: 652 KLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTE- 710
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
N R F E EV L+ + + V GV + ++ +G + +G N Q+ +
Sbjct: 711 ---ENVR----FPEMVEV-LRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICD--- 759
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
S P LI++L +K + G S A + +
Sbjct: 760 ----SSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
GK L + ++Y++G D GRLG + S EPT I +L+ K I + CG S AI
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ G LY WG GN +LG+G +D L P I L++ +++VA G ++ L
Sbjct: 583 SANGALYTWGRGNYGRLGHGTAEDCLTPTMISA--LSDEHIIKVACGSFYAHTLC 635
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 1 MTHLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG------- 53
+T L K+++ + +V S TL T G V + G GD G+LG G
Sbjct: 3071 ITQLKPKLIKSLVGHRIVQVACGSRDAQTLAL-TDEGWVFSWGDGDFGKLGRGGSEGCNI 3129
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
P +ER AL VV++ G ++ LT+ G+V+TWG D LG ++
Sbjct: 3130 PHNIERLN-AL-----EVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSD------- 3176
Query: 114 QTVNLP--------KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP 165
Q V P KK + ++ G H +A+ + G VYAWG + HG G + + P
Sbjct: 3177 QHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGD--NDHGQQGNGTTIVNRKP 3234
Query: 166 LK---LESVSGIVKIASGADHFVMLT 188
LE V I ++A G+ H + T
Sbjct: 3235 ALVHGLEDVH-INRVACGSSHSIAWT 3259
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGL-GPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDG 88
C T V + G GD G+LG G D K +E L V++V G +V LT G
Sbjct: 4077 CITDDDNVWSWGDGDYGKLGRGGSDGC--KVPKKIESLAGLGVIKVECGSQFSVALTRSG 4134
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGS 146
VYTWG D LG G+ P+ V KK + I+ G H VA ++G V+ WG
Sbjct: 4135 SVYTWGKGDYHRLG-HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGD 4193
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADH 183
+ G +G + P + ++ G I +A G+ H
Sbjct: 4194 --NDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAH 4230
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 34 TGGGVVLTCGQGDTGQLG--LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G V K A ++ ++ + G +H V +++G+V+
Sbjct: 4131 TRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQG-KKIISIATGSLHCVACSDEGEVF 4189
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG + + P+ V+ KK ++ G +H++A
Sbjct: 4190 TWGDNDEGQLGDDTTNAIQR-PRLVSALQGKKITNVACGSAHTLA 4233
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 36/194 (18%)
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+L+ G IY +G + G+LG ++ V PTP +L + G FA+ ++
Sbjct: 3863 TLSWGGSGTIYGWGHNHRGQLGGIEGAK-VKIPTPCEALSTLRPVQLVGGEQTLFAVTAD 3921
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G +Y G G G +LG G D +L PT + S+Q
Sbjct: 3922 GKVYATGYGAGGRLGIGGTDSVL---------------------------VPTLLESIQH 3954
Query: 423 KTITSIACG----NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
I IA +C++ + D++ +Y WG G+ +LG+G P IE L Y
Sbjct: 3955 VFIKKIAVNSGGKHCLALSADND--VYSWGEGDDGKLGHGNRLACETPKLIEA--LQGYE 4010
Query: 479 VLQVASGGQHSVIL 492
++ +A GG HS +
Sbjct: 4011 IIDIACGGAHSAAI 4024
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 259
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 260 -YGAGGRLGIGGTESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 317
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 318 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 369
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 370 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 422
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 423 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 473
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 474 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 514
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 515 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 569
Query: 497 P 497
P
Sbjct: 570 P 570
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 199 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 257
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 258 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 317
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 318 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 372
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 373 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 425
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 426 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 478
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 479 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 533
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 534 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 284 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 341
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 342 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 394
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V ++ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 395 VDVACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 452
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 453 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 502
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 503 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 554
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 555 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 587
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 182/395 (46%), Gaps = 50/395 (12%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK-----TFALVEDL 68
E P + V + S GGVV + G+G+ GQLG G D +R T A +
Sbjct: 16 EAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHG-DAEDRPVPTVLTAAFDDAP 74
Query: 69 DNVVEVVV-GGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQ 124
V VV+ G HT + E+ ++Y+WG D G LG D F PQ + + + Q
Sbjct: 75 GGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV-FNPQPIQALQGVRITQ 133
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGAD 182
I+ GDSH +A+ G V++WG R+ +G +GL P K+++ G+ VK IA+GA+
Sbjct: 134 IACGDSHCLAVTVAGHVHSWG--RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 191
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG 241
H +T G+L G G LG R+ R L P +V + + + V G
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGL-----GDRDDR-----LIPEKVSSVNGQKMVLVACG 241
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM----- 295
+T +SS GSI +G + Y QLG D E PH +++L D +
Sbjct: 242 WRHTITVSSSGSIYTYGWSKYGQLGHGDFEDH-------LVPHKLEALKDTTISQEEAVE 294
Query: 296 ----------LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
G AL ++GK+Y +G + +G++G+ + +E P + ++
Sbjct: 295 LIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQK 353
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+ +ACG + A+ ++ WG G QLG+G+
Sbjct: 354 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 388
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 161/367 (43%), Gaps = 61/367 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE-PGEVPLKR 232
+V I++GA H V L S G + + G E GQLG +F + PG V
Sbjct: 22 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA--- 78
Query: 233 KHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
V G +T + + + ++G ++ +LG +S + F P I++L
Sbjct: 79 ---SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS-------SDVFNPQPIQALQG 128
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ T +A G H LA+ G ++++GR+ G+LGL N + + P I + + + IA
Sbjct: 129 VRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIA 187
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------- 385
G + A+ +G LYGWG G LG G DD L
Sbjct: 188 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTIT 247
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS---------------IA 429
+S G IY +G YG+LG + + + P + +L+D TI+
Sbjct: 248 VSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQEEAVELIFFFLGDEGFR 306
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + +A+ ++G LYGWG Q+G G +D P+++ N V+QVA G +H+
Sbjct: 307 VGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP--NEQKVVQVACGWRHT 364
Query: 490 VILAKPK 496
+ L + K
Sbjct: 365 LALTEAK 371
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 186/435 (42%), Gaps = 62/435 (14%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK-------- 121
+VV + G H+V L G V +WG ++G LG GD+E P L
Sbjct: 21 SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGH---GDAEDRPVPTVLTAAFDDAPGGV 77
Query: 122 -AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IV 175
+V I D + E+ +Y+WG G G G G P ++++ G I
Sbjct: 78 ASVVICGADHTTAYSDEELQLYSWG-----WGDFGRLGHGNSSDVFNPQPIQALQGVRIT 132
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+IA G H + +T G++ + G + GQLG + E +P K +
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLG--------------LGNTEDSLLPQKIQAF 178
Query: 236 DDVFTGV------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ V + + ++ G + +G Y LG D + + P + S++
Sbjct: 179 EGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDR-------LIPEKVSSVN 231
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+K ++A G H++ ++S G IY +G YG+LG + + + P + +L+D TI+
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQE 290
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+ F + EG +G G Q L ++GK+Y +G + +G++G+ + +E
Sbjct: 291 EAVELIFFFLGDEGFR----VGGGIQWA-------LAADGKLYGWGWNKFGQVGVGD-NE 338
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
P + ++ + +ACG + A+ ++ WG G QLG+G+ D P I
Sbjct: 339 DHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 398
Query: 470 EGKQLNNYTVLQVAS 484
+ + Q+ S
Sbjct: 399 DALSSDGSACKQLES 413
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
++ ++++G HS+AL S G + ++GR + G+LG + E P+P++
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-----AEDRPVPTVLTAAFDD- 72
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
A G S I G + E ++Y++G D+GRLG N S+
Sbjct: 73 APGGVASVVI----------------CGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD 116
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V P PI +LQ IT IACG+ A+ G ++ WG QLG G +D L P KI
Sbjct: 117 -VFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKI 175
Query: 470 EGKQLNNYTVLQVASGGQHSVILAK 494
+ V +A+G +H+ + +
Sbjct: 176 QA--FEGVRVKMIAAGAEHTAAVTE 198
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 184/417 (44%), Gaps = 58/417 (13%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV WG ND+ LG +G +P +V K + I+ G + +DG +YA G
Sbjct: 3029 KVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG- 3086
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQG 202
++G +GL TP ++ +S V K+A SG H + LT G + + G E G
Sbjct: 3087 -EGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3145
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG +R +E L+ K I D+ G ++ I+S G + +GL Y
Sbjct: 3146 KLGH-----GNRLTLEKPKLIE----TLRTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3196
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHD 319
+LG D+ Q P L+ +L D + +A G +L L +G ++++G D
Sbjct: 3197 GRLGHGDNCTQ-------LKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGD 3249
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG + SE + P + L + I CG S A+ G ++ WG G+ Y+LG+G
Sbjct: 3250 FGKLG-RGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHG 3308
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+ + V +PTPI L+ K + +A G A+
Sbjct: 3309 TD---------------------------QHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3341
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G +Y WG + Q G+G +P + G L+ V +VA G HSV + P+
Sbjct: 3342 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLG--LDGIFVNRVACGSSHSVAWSLPQ 3396
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 178/412 (43%), Gaps = 56/412 (13%)
Query: 90 VYTWGCNDEGALG-REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
++ WG N G LG + P + +QI+ G+ A+ DG +YA G +
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG-YG 4149
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ + TP +ES+ + V + SG H + L+S G + + G E G+L
Sbjct: 4150 AGGRLGVGGTDSV-TTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4208
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQ 263
G +R++ +E L + D+ G ++ I+ +G +L +G Y +
Sbjct: 4209 GH-----GNRDSYDRPKLIES----LSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGR 4259
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYG 321
LG DSE Q P L+++L + +A SG +L + + ++++G DYG
Sbjct: 4260 LGHGDSEDQ-------LQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4312
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+LG + S+ P I SL +T + CG+ S A+ G +Y WG G
Sbjct: 4313 KLG-RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG---------- 4361
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
DY RLG N ++ V P + +LQ K I SIA G+ A
Sbjct: 4362 ----------------DYHRLGHGN-TDHVRRPKKVAALQGKKIISIATGSLHCVACSDA 4404
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G ++ WG + QLG+G I P ++ L +++V G H++ L+
Sbjct: 4405 GEVFTWGDNDEGQLGDGTVSAIQRPRLVQS--LQGKHIVKVICGSAHTLALS 4454
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 42/357 (11%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
VL G D QLG L ++ T++ V + + G +++DGK+Y G
Sbjct: 3030 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG--- 3086
Query: 98 EGALGREAEGDSEFIPQTVNLP------KKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
EG GR G + +P +P K V + +G H++AL DG V++WG D
Sbjct: 3087 EGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED-- 3144
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--- 206
G +G + P +E++ I IA G+ H +TS G L T G E G+LG
Sbjct: 3145 GKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3204
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYS 262
TQ L+P V + H + V G + ++ G + ++G ++
Sbjct: 3205 CTQ-------------LKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFG 3251
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG SE C PH + L+ + G SLAL G+++ +G+ DY R
Sbjct: 3252 KLGRGGSE------GCSI-PHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYR 3304
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LG + V +PTPI L+ K + +A G A+ G +Y WG + Q G+G
Sbjct: 3305 LG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3360
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 181/418 (43%), Gaps = 61/418 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G + G GQLG G D K E L + + + GG T+ +T DGK+Y
Sbjct: 4087 GASTIFGWGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA 4145
Query: 93 WGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
G G LG DS P V ++ K V +++G H +AL DG V++WG
Sbjct: 4146 TGYGAGGRLGVGGT-DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGE 4204
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G P +ES+SGI V IA G+ H +T +G++LT G +G+ GR
Sbjct: 4205 D--GKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWG---KGRYGR 4259
Query: 207 ITQRSASRNARRGMSFLEPG--EVPLKRKHIDDVF-TGVYNTF-ISSKGSILAFGLNNYS 262
+ + L+P E L + ID +G T I+ ++ ++G +Y
Sbjct: 4260 LGHGDSEDQ-------LQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4312
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S+ K P I+SL+ T + G S+AL G +Y +G+ DY R
Sbjct: 4313 KLGRGGSDGCK-------VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHR 4365
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG N ++ V P + +LQ K I SIA G+ A G ++ WG + QLG+G
Sbjct: 4366 LGHGN-TDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDG--- 4421
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ P + SLQ K I + CG+ + A+ +
Sbjct: 4422 ------------------------TVSAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4455
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 171/405 (42%), Gaps = 66/405 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG + ++ L + + V V GG H + LT DGKV++W
Sbjct: 3080 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G ++G LG E L K ++ I+ G SHS A+ G +Y WG G
Sbjct: 3140 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGL-----G 3194
Query: 153 SMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLG 205
G G G T LK + V+ +V++A G+ + LT G + + G + G+LG
Sbjct: 3195 EYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG 3254
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----------YNTFISSKGSILA 255
R S +P H D GV ++ ++ G +
Sbjct: 3255 RGGSEGCS--------------IP----HQVDRLNGVGVMQIECGAQFSLALTKAGEVWT 3296
Query: 256 FGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G +Y +LG D V+K P I+ L KK +A G H LA+ G++YA
Sbjct: 3297 WGKGDYYRLGHGTDQHVRK--------PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYA 3348
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G +D+G+ G N +P+ + L + +ACG+ S A W +
Sbjct: 3349 WGDNDHGQQGSGNTIVN-KKPSLVLGLDGIFVNRVACGSSHSVA---------WSLPQN- 3397
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
Q K++ + + K G H G + + + P P+PS
Sbjct: 3398 QTEKDKKEPVPFAVAK-DPLGSHSLG-IYASDTEATTSSPLPVPS 3440
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 37/237 (15%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
++S G + ++G + +LG D+ ++ P I +L+D++ T + G +S A+
Sbjct: 624 LASSGDVYSWGSGDGGRLGHGDTSAKE-------LPTRIAALADRQVTGVFCGSSYSAAI 676
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA--CGNCVSFAIDSEGV 364
+ G++Y +GR YGRLG N SE PT + +L+ + +A CG+ S + G+
Sbjct: 677 TASGELYTWGRGTYGRLGHGN-SEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735
Query: 365 LYGWGMGNGYQLGN-------------------------GKEDDI-LNSEGKIYAFGRHD 398
+ WG G+ +LGN G + + L EG +Y +G+
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGH 795
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
GRLG N SE P + +L+ K I +A G A+ + G LYGWG + Q+
Sbjct: 796 GGRLGHGN-SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 175/390 (44%), Gaps = 52/390 (13%)
Query: 61 TFALVEDLDNV----VEVVVGGMHTVCLTEDGKVYTWGCNDEGALG---REAEGDSEFIP 113
T LVE L +V V V GG H + L+ DG+V++WG ++G LG R++ + I
Sbjct: 4164 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE 4223
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
+ V I+ G +HS + G V WG R +G +G Q P +E++ G
Sbjct: 4224 SLSGI--GVVDIACGSAHSACITIQGHVLTWGKGR--YGRLGHGDSEDQLQPKLVEALLG 4279
Query: 174 IVKI----ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
I SG + +T N+ + G + G+LG RG S + +VP
Sbjct: 4280 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG------------RGGS--DGCKVP 4325
Query: 230 LKRKHIDDV-FTGV-----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
+K + + + T V ++ ++ GS+ +G +Y +LG +++ + P
Sbjct: 4326 MKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRR-------PK 4378
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+ +L KK +A+G H +A + G+++ +G +D G+LG VS + P + SLQ
Sbjct: 4379 KVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSA-IQRPRLVQSLQG 4437
Query: 344 KTITSIACGNCVSFAID----SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
K I + CG+ + A+ SE V Y L ++L++ + H +
Sbjct: 4438 KHIVKVICGSAHTLALSTYQLSEAVRPPPSPPLEYDLVRDIAPEVLHARLVLL----HHF 4493
Query: 400 GRLGLKNVSE-PVTEPTPIPSLQDKTITSI 428
L ++ P+ P + SL+D + SI
Sbjct: 4494 SELLCPCLAMLPIAGPLSLASLKDVLVYSI 4523
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H LAL S G +Y++G D GRLG + S PT I +L D+ +T + CG+ S AI +
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKEL-PTRIAALADRQVTGVFCGSSYSAAITA 678
Query: 362 EGVLYGWGMGNGYQLGNGKEDD----------------------------ILNSEGKIYA 393
G LY WG G +LG+G +D + G +A
Sbjct: 679 SGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFA 738
Query: 394 FGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+G D+G+LG ++ S PV P Q + + G+ S A+ EG +Y WG G
Sbjct: 739 WGDGDFGKLGNESCVGTSVPVQVDLP----QASCVVKVFSGSQFSVALTREGTVYTWGKG 794
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+G +LG+G + P ++ L ++ +A G H + L
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQA--LEGKKIVDLAVGLAHCLAL 834
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 112/251 (44%), Gaps = 41/251 (16%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
N +SSK +L +GLN+ QLG K P LS K +A G
Sbjct: 3023 NDEVSSK--VLVWGLNDKEQLGGLKGSKVK-------LPTYSSVLSQLKPIHIAGGSKSL 3073
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDS 361
++ +GK+YA G GRLGL + + V P +P L + +A G + A+
Sbjct: 3074 FIVSQDGKLYACGEGTNGRLGLGH-NNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTL 3132
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+G ++ WG G +LG+G RL L+ +P I +L+
Sbjct: 3133 DGKVFSWGEGEDGKLGHGN--------------------RLTLE-------KPKLIETLR 3165
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
K I IACG+ S AI S G LY WG+G +LG+G L+P + L ++ V+Q
Sbjct: 3166 TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LQDHRVVQ 3223
Query: 482 VASGGQHSVIL 492
VA G + + L
Sbjct: 3224 VACGSRDAQTL 3234
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALL 136
G H + L G VY+WG D G LG E + L + V + G S+S A+
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAIT 677
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGA--DHFVMLTSRGN 192
G +Y WG R ++G +G + P + ++ +V +A G H + +T G
Sbjct: 678 ASGELYTWG--RGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGV-YNTFISSK 250
G G G++ S G S P +V L + + VF+G ++ ++ +
Sbjct: 736 AFAWG---DGDFGKLGNESCV-----GTSV--PVQVDLPQASCVVKVFSGSQFSVALTRE 785
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++ +G + +LG +SE P ++++L KK LA G H LAL + G
Sbjct: 786 GTVYTWGKGHGGRLGHGNSEHSP-------VPKMVQALEGKKIVDLAVGLAHCLALTASG 838
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
++Y +GR+D+ ++ + V+ PI
Sbjct: 839 ELYGWGRNDFQQICPECVTRDPIITAPI 866
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVG--GMHTVCLTEDGK 89
T G + T G+G G+LG G + ++ LV L VV V +G H++C+TE G
Sbjct: 677 TASGELYTWGRGTYGRLGHG-NSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735
Query: 90 VYTWGCNDEGALGREA-EGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGS 146
+ WG D G LG E+ G S +P V+LP+ + V++ +G SVAL +GTVY WG
Sbjct: 736 AFAWGDGDFGKLGNESCVGTS--VPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWG- 792
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG------- 197
+ G +G P ++++ G IV +A G H + LT+ G L G
Sbjct: 793 -KGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851
Query: 198 CPE 200
CPE
Sbjct: 852 CPE 854
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 54/278 (19%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
IV++A+ + H + L S G++ + G + G+LG + R L
Sbjct: 609 IVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAA---------LA 659
Query: 232 RKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ + VF G Y+ I++ G + +G Y +LG +SE + + P L+ +L
Sbjct: 660 DRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDK-------YVPTLVTALKA 712
Query: 291 KKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKT 345
+ +A G HSL + G +A+G D+G+LG ++ S PV P Q
Sbjct: 713 HRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLP----QASC 768
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ + G+ S A+ EG +Y WG G+G +LG+G +
Sbjct: 769 VVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGL 828
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
L + G++Y +GR+D+ ++ + V+ PI
Sbjct: 829 AHCLALTASGELYGWGRNDFQQICPECVTRDPIITAPI 866
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 36/244 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G GD G+LG G D ++ + L + V V G ++ +T G++YTWG
Sbjct: 628 GDVYSWGSGDGGRLGHG-DTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWG 686
Query: 95 CNDEGALGREAEGDSE--FIPQTVNLPKK----AVQISAGDSHSVALLEDGTVYAWGSFR 148
G GR G+SE ++P V K V + GD+HS+ + E G +AWG
Sbjct: 687 ---RGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGD-- 741
Query: 149 DSHGSMGLKGEGIQKTPLK--LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +G + P++ L S +VK+ SG+ V LT G + T G G+LG
Sbjct: 742 GDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLG- 800
Query: 207 ITQRSASRNARRGMSFLEPGEVP-----LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
G S E VP L+ K I D+ G+ + +++ G + +G N+
Sbjct: 801 -----------HGNS--EHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRND 847
Query: 261 YSQL 264
+ Q+
Sbjct: 848 FQQI 851
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 21/203 (10%)
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY---G 367
++Y F + R G+ + P I L D+ + NCV DS VLY
Sbjct: 532 ELYGFTATEAIRTGIDG-AMPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVLYLSHA 590
Query: 368 WGMGNG-------------YQLG---NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
M QL G+ L S G +Y++G D GRLG + S
Sbjct: 591 ISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKE 650
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
PT I +L D+ +T + CG+ S AI + G LY WG G +LG+G +D P +
Sbjct: 651 L-PTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTA 709
Query: 472 KQLNNYTVLQVASGGQHSVILAK 494
+ + + + G HS+ + +
Sbjct: 710 LKAHRVVHVALGCGDAHSLCVTE 732
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 135/330 (40%), Gaps = 38/330 (11%)
Query: 57 MERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT 115
M R + A ++ L D V ++V LT+ G V L + P
Sbjct: 550 MPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVLY--------LSHAISMTEDNYPAQ 601
Query: 116 VN-LPKKAVQISAG--DSHSVALLEDGTVYAWGSF---RDSHGSMGLKGEGIQKTPLKLE 169
V L VQ++A H +AL G VY+WGS R HG K + L
Sbjct: 602 VKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADR 661
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
V+G+ G+ + +T+ G L T G +G GR+ ++ ++
Sbjct: 662 QVTGVF---CGSSYSAAITASGELYTWG---RGTYGRLGHGNSEDK------YVPTLVTA 709
Query: 230 LKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
LK + V G ++ ++ G A+G ++ +LG +S V S P
Sbjct: 710 LKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGN-ESCVGTSVPVQVDLPQ--A 766
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
S K F SG S+AL EG +Y +G+ GRLG N SE P + +L+ K I
Sbjct: 767 SCVVKVF----SGSQFSVALTREGTVYTWGKGHGGRLGHGN-SEHSPVPKMVQALEGKKI 821
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+A G A+ + G LYGWG + Q+
Sbjct: 822 VDLAVGLAHCLALTASGELYGWGRNDFQQI 851
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 2 THLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG-------P 54
T L K++ ++ +V S TL C T G+V + G GD G+LG G P
Sbjct: 3206 TQLKPKLVTALQDHRVVQVACGSRDAQTL-CLTEDGLVFSWGDGDFGKLGRGGSEGCSIP 3264
Query: 55 DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQ 114
++R V+++ G ++ LT+ G+V+TWG D LG G + + +
Sbjct: 3265 HQVDRLNGV------GVMQIECGAQFSLALTKAGEVWTWGKGDYYRLG---HGTDQHVRK 3315
Query: 115 TVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
+ KK + ++ G H +A+ + G VYAWG + HG G + K P +
Sbjct: 3316 PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGD--NDHGQQGSGNTIVNKKPSLVLG 3373
Query: 171 VSGIV--KIASGADHFV 185
+ GI ++A G+ H V
Sbjct: 3374 LDGIFVNRVACGSSHSV 3390
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN---VVEVVVGGMHTVCLTEDG 88
C T G+ G GD G+LG V + + DL VV+V G +V LT +G
Sbjct: 729 CVTEAGLAFAWGDGDFGKLGNESCV--GTSVPVQVDLPQASCVVKVFSGSQFSVALTREG 786
Query: 89 KVYTWGCNDEGALGREAEGDSEF--IPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAW 144
VYTWG +G GR G+SE +P+ V KK V ++ G +H +AL G +Y W
Sbjct: 787 TVYTWG---KGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGW 843
Query: 145 G 145
G
Sbjct: 844 G 844
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V T G+GD +LG G D + R ++ + G +H V ++ G+V+T
Sbjct: 4350 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFT 4409
Query: 93 WGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSVAL 135
WG NDEG LG +G I P+ V K V++ G +H++AL
Sbjct: 4410 WGDNDEGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4453
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 64/414 (15%)
Query: 89 KVYTWGCNDEGALG------REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
+V+ WG ND+ LG + S+F+ Q + I+ G + +G +Y
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLW-----PIHIAGGSKSLFIVSHEGKLY 2110
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPE 200
A G + +G P+ S I K+A SG H + LT G + + G E
Sbjct: 2111 ACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 2170
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGL 258
G+LG + ++ +P + L+ K I D+ G ++ I+S G + +GL
Sbjct: 2171 DGKLGHGNR----------LNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGL 2220
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFG 316
Y +LG D+ Q P LIKSL + +A G +LAL EG ++++G
Sbjct: 2221 GEYGRLGHGDNITQ-------LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWG 2273
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
D+G+LG + SE P I L + I CG S A+ G ++ WG G+ ++L
Sbjct: 2274 DGDFGKLG-RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 2332
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G + + V +PT I SL+DK + +A G
Sbjct: 2333 GHGSD---------------------------QHVRKPTVIESLKDKKVIHVAVGALHCL 2365
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ G +Y WG + Q GNG +P + G L + + +VA G HS+
Sbjct: 2366 AVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHG--LEDVHINRVACGSSHSI 2417
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 179/415 (43%), Gaps = 61/415 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V +VGG T+ +T DGKVY
Sbjct: 3029 GSGTIYGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA 3087
Query: 93 WGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
G G DS +P + ++ K + +++G H +AL D VY+WG
Sbjct: 3088 TGYGAGGR-LGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G +TP +E++ G I+ IA G H +TS G L T G +G+ GR
Sbjct: 3147 D--GKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG---KGRYGR 3201
Query: 207 ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYS 262
+ + L+P + L + DV G I+ ++ ++G +Y
Sbjct: 3202 LGHGDSEDQ-------LKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYG 3254
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S+ K P I+SL+ + G S+AL G +Y +G+ DY R
Sbjct: 3255 KLGRGGSDGCK-------VPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHR 3307
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG E V P + +LQ K I SIA G+ A EG ++ WG + QLG D
Sbjct: 3308 LG-HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG----D 3362
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
D N+ + P + +LQ K IT++ACG+ + A
Sbjct: 3363 DTTNA-----------------------IQRPRLVSALQGKKITNVACGSAHTLA 3394
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG R L + + V V GG H + LT DGKV++W
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ++G LG + + P+ + KK I+ G SHS A+ G +Y WG +
Sbjct: 2167 GEGEDGKLGHGNRLNLD-KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWG--LGEY 2223
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G Q P ++S+ G IV++A G+ + LT G + + G + G+LGR
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR- 2282
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE- 266
S N + L EV + ++ ++ G + +G +Y +LG
Sbjct: 2283 -GGSEGCNIPHNIERLNALEV------VQIECGAQFSLALTKTGEVWTWGKGDYFRLGHG 2335
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+D V+K P +I+SL DKK +A G H LA+ G++YA+G +D+G+ G
Sbjct: 2336 SDQHVRK--------PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG-- 2385
Query: 327 NVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
N + V +P + L+D I +ACG+ S A
Sbjct: 2386 NGTTIVNRKPALVHGLEDVHINRVACGSSHSIA 2418
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 37/292 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G+GD G+LG G + + +T L+E L ++++ GG H+ +T G++YTWG
Sbjct: 3139 VYSWGEGDDGKLGHG-NRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG-- 3195
Query: 97 DEGALGREAEGDSE------FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+G GR GDSE I + V V +GD+ ++ + +D V++WG
Sbjct: 3196 -KGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGD--GD 3252
Query: 151 HGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +G G K P K+ES++ G++K+ G+ V LT G++ T G + +LG T
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGT 3312
Query: 209 QRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG- 265
R P +V L+ K I + TG ++ S +G + +G N+ QLG
Sbjct: 3313 GEHVRR----------PKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGD 3362
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ + +Q+ P L+ +L KK T +A G H+LA ++ A R
Sbjct: 3363 DTTNAIQR--------PRLVSALQGKKITNVACGSAHTLAWSTNNASSACAR 3406
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 160/387 (41%), Gaps = 59/387 (15%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
GT+Y WG + G +G ++G + K P E++S + V++ G +T+ G +
Sbjct: 3031 GTIYGWG--HNHRGQLGGIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA 3087
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G G+LG S VP + I VF K +
Sbjct: 3088 TGYGAGGRLGIGGTDSVL--------------VPTLLESIQHVFIKKIAVNSGGKHCLAL 3133
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
N+ GE D GN TP LI++L + +A G HS A+ S G++Y
Sbjct: 3134 SADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYT 3193
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGN 372
+G+ YGRLG + SE +P I L + +ACG + + I + ++ WG G+
Sbjct: 3194 WGKGRYGRLGHGD-SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 3252
Query: 373 GYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDYGRLGLKN 406
+LG G D L G +Y +G+ DY RLG
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HG 3311
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
E V P + +LQ K I SIA G+ A EG ++ WG + QLG+ + I P
Sbjct: 3312 TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRP 3371
Query: 467 M---KIEGKQLNNYTVLQVASGGQHSV 490
++GK++ N VA G H++
Sbjct: 3372 RLVSALQGKKITN-----VACGSAHTL 3393
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+S +G + A G +LG S V F + ++IK ++ + SG H++
Sbjct: 2102 IVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVA------VHSGGKHAM 2155
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +GK++++G + G+LG N + +P I +L+ K I IACG+ S AI S G
Sbjct: 2156 ALTLDGKVFSWGEGEDGKLGHGNRLN-LDKPKMIEALRSKKIRDIACGSSHSAAITSSGE 2214
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDK 423
LY WG+G +YGRLG N+++ +P I SL
Sbjct: 2215 LYTWGLG--------------------------EYGRLGHGDNITQ--LKPKLIKSLVGH 2246
Query: 424 TITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
I +ACG + + A+ EG ++ WG G+ +LG G + P IE +LN V+Q
Sbjct: 2247 RIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE--RLNALEVVQ 2304
Query: 482 VASGGQHSVILAK 494
+ G Q S+ L K
Sbjct: 2305 IECGAQFSLALTK 2317
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGL-GPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDG 88
C T V + G GD G+LG G D K +E L V++V G +V LT G
Sbjct: 3238 CITDDDNVWSWGDGDYGKLGRGGSDGC--KVPKKIESLAGLGVIKVECGSQFSVALTRSG 3295
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGS 146
VYTWG D LG G+ P+ V KK + I+ G H VA ++G V+ WG
Sbjct: 3296 SVYTWGKGDYHRLG-HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGD 3354
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADH 183
+ G +G + P + ++ G I +A G+ H
Sbjct: 3355 --NDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAH 3391
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 34 TGGGVVLTCGQGDTGQLG--LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G V K A ++ ++ + G +H V +++G+V+
Sbjct: 3292 TRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQG-KKIISIATGSLHCVACSDEGEVF 3350
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG + + P+ V+ KK ++ G +H++A
Sbjct: 3351 TWGDNDEGQLGDDTTNAIQR-PRLVSALQGKKITNVACGSAHTLA 3394
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D RK ++E L + V+ V VG +H + +T+ G+VY
Sbjct: 2316 TKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCLAVTDTGQVY 2374
Query: 92 TWGCNDEGALG 102
WG ND G G
Sbjct: 2375 AWGDNDHGQQG 2385
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 36/194 (18%)
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+L+ G IY +G + G+LG ++ V PTP +L + G FA+ ++
Sbjct: 3024 TLSWGGSGTIYGWGHNHRGQLGGIEGAK-VKIPTPCEALSTLRPVQLVGGEQTLFAVTAD 3082
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G +Y G G G +LG G D +L PT + S+Q
Sbjct: 3083 GKVYATGYGAGGRLGIGGTDSVL---------------------------VPTLLESIQH 3115
Query: 423 KTITSIACG----NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
I IA +C++ + D++ +Y WG G+ +LG+G P IE L Y
Sbjct: 3116 VFIKKIAVNSGGKHCLALSADND--VYSWGEGDDGKLGHGNRLACETPKLIEA--LQGYE 3171
Query: 479 VLQVASGGQHSVIL 492
++ +A GG HS +
Sbjct: 3172 IIDIACGGAHSAAI 3185
>gi|429962661|gb|ELA42205.1| hypothetical protein VICG_00848 [Vittaforma corneae ATCC 50505]
Length = 362
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 162/359 (45%), Gaps = 56/359 (15%)
Query: 39 VLTCGQGDTGQLGLGPDV------MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G GQLGL D+ +E+ F N+V++ G +H L E+ ++Y+
Sbjct: 3 LFVLGSNLMGQLGLDQDLSSTNRPIEQPFFRN----KNIVKIAAGKLHAFILCENNELYS 58
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG ND+ ALGRE + E P V + +K + I G S+S L E G V+A G+F+ + G
Sbjct: 59 WGVNDDRALGREGD---ERAPTPVAITQKIMDICCGASYSAILTERGQVFACGTFKSTSG 115
Query: 153 SMGLKG-EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
G Q T +++++ I KI G +H +M NL T G EQGQLGRI +
Sbjct: 116 VFGFDSTTKFQPTFKRIKNLRNIKKIFGGQNHIIMTDGHNNLWTVGANEQGQLGRIHR-- 173
Query: 212 ASRNARRGMSFLEPGEVPLK-RKHIDDVFT-----GVYNTFISSKGSILAFGLNNYSQLG 265
+RN +R LEP +V K +++ + FT G ++ I++ +G N QLG
Sbjct: 174 -ARNVKRC---LEPFQVSSKMKRNANFSFTKAAGGGSHSMAINTDFECFGWGSNFNGQLG 229
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTML------ASGQHHSLALNSEGKIYAFGRHD 319
D+ S +K+ +L A G H++ L + +++ G +
Sbjct: 230 VGDT----------------TSSEEKRIVLLDNVKSVACGSTHTIFLTNSNEVFGCGDNT 273
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV-LYGWGMGNGYQLG 377
+LG++ VT P I IA G F I G L WG +LG
Sbjct: 274 LSQLGIEGTKMEVT-----PRFIIGNIDKIAAG--CDFCIAQRGSRLLSWGSNLNGELG 325
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 126/330 (38%), Gaps = 58/330 (17%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IVKIA+G H +L L + G + LGR A P V + +K
Sbjct: 37 IVKIAAGKLHAFILCENNELYSWGVNDDRALGREGDERA------------PTPVAITQK 84
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+D Y+ ++ +G + A G ++ S V +T F P + + +
Sbjct: 85 IMDICCGASYSAILTERGQVFACGT------FKSTSGVFGFDSTTKFQPTFKRIKNLRNI 138
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLG-------LKNVSEPVTEPTPIPSLQDKTI 346
+ GQ+H + + ++ G ++ G+LG +K EP + + + +
Sbjct: 139 KKIFGGQNHIIMTDGHNNLWTVGANEQGQLGRIHRARNVKRCLEPFQVSSKMKRNANFSF 198
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-----------DDI----------- 384
T A G S AI+++ +GWG QLG G D++
Sbjct: 199 TKAAGGGSHSMAINTDFECFGWGSNFNGQLGVGDTTSSEEKRIVLLDNVKSVACGSTHTI 258
Query: 385 -LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L + +++ G + +LG++ VT P I IA G F I G
Sbjct: 259 FLTNSNEVFGCGDNTLSQLGIEGTKMEVT-----PRFIIGNIDKIAAG--CDFCIAQRGS 311
Query: 444 -LYGWGMGNGYQLGNG--KEDDILEPMKIE 470
L WG +LG + D+I +P +I+
Sbjct: 312 RLLSWGSNLNGELGFDEIEYDEIKKPTEID 341
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
++ G + G+LGL P P ++K I IA G +F + LY WG+
Sbjct: 3 LFVLGSNLMGQLGLDQDLSSTNRPIEQPFFRNKNIVKIAAGKLHAFILCENNELYSWGVN 62
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ LG ++ P+ I K ++ + G +S IL +
Sbjct: 63 DDRALGREGDERAPTPVAITQK------IMDICCGASYSAILTE 100
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 36/213 (16%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ G + G+LGL P P ++K I IA G +F + LY WG+
Sbjct: 3 LFVLGSNLMGQLGLDQDLSSTNRPIEQPFFRNKNIVKIAAGKLHAFILCENNELYSWGVN 62
Query: 372 NGYQLGNGKEDD------------------------ILNSEGKIYAFG--RHDYGRLGLK 405
+ L G+E D IL G+++A G + G G
Sbjct: 63 DDRAL--GREGDERAPTPVAITQKIMDICCGASYSAILTERGQVFACGTFKSTSGVFGFD 120
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE----D 461
+ ++ +PT + I I G D L+ G QLG
Sbjct: 121 STTK--FQPTFKRIKNLRNIKKIFGGQNHIIMTDGHNNLWTVGANEQGQLGRIHRARNVK 178
Query: 462 DILEPMKIEGKQLN--NYTVLQVASGGQHSVIL 492
LEP ++ K N++ + A GG HS+ +
Sbjct: 179 RCLEPFQVSSKMKRNANFSFTKAAGGGSHSMAI 211
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3992 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4049
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4050 GKLGHGNRSPCDRP--RVIESLRGIEV------VDIAAGGAHSACITAAGDLFTWGKGRY 4101
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4102 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4154
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4155 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4205
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4206 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4246
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4247 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4301
Query: 497 P 497
P
Sbjct: 4302 P 4302
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2940 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2997
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 2998 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3056
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3057 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3107
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3108 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3160
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3161 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3212
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3213 -------------------DYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3252
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3253 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3302
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++SL+ + +A S HH LAL++ G+++++G D GRLG + + P+
Sbjct: 455 NSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD-TVPLE 513
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I +L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 514 EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 573
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 574 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 632
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 633 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG--LKGKKVID 690
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 691 VAAGSTHCLALTE 703
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 63/353 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG 180
VQI+ + + L +G VY D+ G P ++S++ IVKIA+
Sbjct: 431 VQIACAEKRFLILSRNGRVYTQAYNSDTLG------------PQLVQSLASRNIVKIAAH 478
Query: 181 AD--HFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+D H++ L++ G + + GC + G+LG T +S + G KH+
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG------KHVVH 532
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G Y+ I+++G + +G NY +LG SE Q P L+ L K +
Sbjct: 533 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDV 585
Query: 297 A--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ SG +LA+ G+++++G DYG+LG + S+ P I LQD I + CG+
Sbjct: 586 SCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQ 644
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSE 388
S A+ +G +Y WG G+ +LG+G E+ + L +
Sbjct: 645 FSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTED 704
Query: 389 GKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+++++G +D + +++P EP +P L K I IACG SFA S
Sbjct: 705 SEVHSWGSNDQCQHFDTLRITKP--EPAALPGLDTKHIVGIACGPAQSFAWSS 755
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGK+++
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3051 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 3105
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3106 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3165
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3166 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3210
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3211 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3262
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3263 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3931 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3989
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3990 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4049
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V IA+G H +T+ G+L T G +G+ GR+
Sbjct: 4050 --GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG---KGRYGRL 4104
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 4105 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4157
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4158 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4210
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4211 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4265
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4266 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4296
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 51/313 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 4016 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 4073
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G ++TWG +G GR GDSE P+ V + +
Sbjct: 4074 ----VVDIAAGGAHSACITAAGDLFTWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRV 4126
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4127 IDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4184
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4185 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4234
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4235 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINR 4286
Query: 296 LASGQHHSLALNS 308
+A G H+LA ++
Sbjct: 4287 VACGSAHTLAWST 4299
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 39/308 (12%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L+ +G+V++WGC D G LG GD+ + P+ ++
Sbjct: 471 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG---HGDTVPLEEPKLISALSGKQAG 527
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 528 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 585
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E L+ I
Sbjct: 586 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIEK----LQDLDI 636
Query: 236 DDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V G ++ ++ G + +G + +LG E + P L++ L KK
Sbjct: 637 VKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR-------YPKLLEGLKGKKVI 689
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A+G H LAL + +++++G +D + +++P EP +P L K I IACG
Sbjct: 690 DVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKP--EPAALPGLDTKHIVGIACGP 747
Query: 354 CVSFAIDS 361
SFA S
Sbjct: 748 AQSFAWSS 755
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2938 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2990
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3051 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3083
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 3141
Query: 488 HSVILA 493
+ LA
Sbjct: 3142 DAQTLA 3147
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTED 87
+ G V + G GD G+LG G D + + L+ L +VV + G ++ +T +
Sbjct: 488 SANGEVFSWGCGDGGRLGHG-DTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 546
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
G++YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++
Sbjct: 547 GELYTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 605
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G KTP +E + IVK+ G+ + LT G + T G +
Sbjct: 606 WGD--GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 663
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+LG T+ R LE LK K + DV G + ++ + ++G N+
Sbjct: 664 QRLGHGTEEHV-----RYPKLLE----GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 714
Query: 261 YSQ 263
Q
Sbjct: 715 QCQ 717
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 193/419 (46%), Gaps = 45/419 (10%)
Query: 39 VLTCGQGDTGQLGL--GPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V G GD G+LG G E ++ L + + GG HT+ LTE+G+VY G N
Sbjct: 11 VALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIA-LACGGAHTLVLTEEGRVYASGLN 69
Query: 97 DEGALGRE-AEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
D G LG + G S + LP +A I+AGD HS A+ EDG VY WG R++ G
Sbjct: 70 DWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWG--RNTQGQ 127
Query: 154 MGL--KGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT- 208
+GL +G+G +ES+ I +A GA+H + L+ G +L+ G G+LG
Sbjct: 128 LGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEG 187
Query: 209 QRSASR-NARRGMSFLEPGEVP-LKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLG 265
RS+S + R S P V + + V G+ ++ + +GS+ FG QLG
Sbjct: 188 HRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLG 247
Query: 266 -EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
D ++ + P +A G +H+ A++ G++Y +G ++YG LG
Sbjct: 248 LGGDRDISEPKRVPVIPP----------VEEIACGGYHTGAISRNGQLYMWGSNEYGCLG 297
Query: 325 LKNVSEPVTE-PTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ T P + +L+ +T + CG + A+ +G ++ WG G
Sbjct: 298 FGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWG----------- 346
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
S+G G G+LGL N ++ EPT + S K I I+CG S AI E
Sbjct: 347 ---GSQGTHGVDGLSSGGQLGLGNEND-FLEPTQVKSKNMKAI-QISCGFNHSGAILEE 400
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 63/364 (17%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+ +A G H ++LT G + +G + GQLG S M FLE +P + K
Sbjct: 45 IALACGGAHTLVLTEEGRVYASGLNDWGQLGLPLSTGHS------MEFLEVEGLPDEAKF 98
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
++ IS G + +G N QLG + K G ++SL D +
Sbjct: 99 THIAAGDFHSAAISEDGRVYMWGRNTQGQLG-----LGKRGKGKVCAAQWVESLKDFRIQ 153
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLG---------LKNVSEPVTEPTP--IPSLQD 343
LA G HSLAL+ EG++ ++G GRLG + ++ +E TP + +D
Sbjct: 154 ALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRD 213
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------- 384
++ +A G S +D +G L+ +G G QLG G + DI
Sbjct: 214 VKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIPPVEEIACGG 273
Query: 385 -----LNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIP-SLQDKTITSIACGNCVSFA 437
++ G++Y +G ++YG LG + T P + +L+ +T + CG + A
Sbjct: 274 YHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMA 333
Query: 438 IDSEGVLYGWGMG------------NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+ +G ++ WG G +G QLG G E+D LEP +++ K N +Q++ G
Sbjct: 334 LTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNENDFLEPTQVKSK---NMKAIQISCG 390
Query: 486 GQHS 489
HS
Sbjct: 391 FNHS 394
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 38/298 (12%)
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTFISSKGSILAFGL 258
G GR+ Q S G SF EP V +H+ + G + ++ +G + A GL
Sbjct: 17 GDYGRLGQAS-------GESFWEP-TVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGL 68
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFGR 317
N++ QLG S +G++ F ++ L D+ KFT +A+G HS A++ +G++Y +GR
Sbjct: 69 NDWGQLGLPLS----TGHSMEFLE--VEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGR 122
Query: 318 HDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ G+LGL K V + SL+D I ++A G S A+ EG + WG +L
Sbjct: 123 NTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRL 182
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G+ G + S T P + +D ++ +A G S
Sbjct: 183 GHGE--------------GHRSSSMFSIFRKSSEYT-PRLVKGFRDVKVSKVAAGLTHSA 227
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+D +G L+ +G G QLG G + DI EP ++ V ++A GG H+ +++
Sbjct: 228 CLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIP----PVEEIACGGYHTGAISR 281
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 19 KVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVV 76
KV + + C G + T G+G QLGLG D+ E K ++ ++ E+
Sbjct: 215 KVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIPPVE---EIAC 271
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVN---LPKKAVQISAGDSHS 132
GG HT ++ +G++Y WG N+ G LG ++ +P V + Q+ G H+
Sbjct: 272 GGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHT 331
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKG 158
+AL DG V+AWG + S G+ G+ G
Sbjct: 332 MALTVDGDVFAWG-WGGSQGTHGVDG 356
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 184/415 (44%), Gaps = 55/415 (13%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
V WG N G LG + +P V LPK + + GD+HS+A+ GTV AWG
Sbjct: 63 AVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWG- 121
Query: 147 FRDSHGSMGLKGEGIQK-TPL--KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
R++ G +G G I + TP+ +L + + +A+G +H + LTS G + G GQ
Sbjct: 122 -RNAVGQLG-DGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
LG T+ +R+ +SF P G+++ ++S G++ A+G N+ Q
Sbjct: 180 LGDGTR--TNRSTPVAVSF------PSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQ 231
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG+ + +S TP ++ T +A G HSLA+ S G A+G + G+L
Sbjct: 232 LGDG-TRTNRS------TPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQL 284
Query: 324 GL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
G N++ + +P T+T++A G S A+ S G + WG N QLG+G
Sbjct: 285 GDGSNINRDASVHVRLP--PGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTAR 342
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
D +N V+ P + TIT++A G+ A+ S G
Sbjct: 343 D---------------------RNTPGSVSLPPGV------TITAVAAGDLFGLALTSAG 375
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
+ WG QLG+G P+ T + SG HS+ L P+P
Sbjct: 376 TVLAWGGNIVGQLGDGTTTVRRTPVAASLPTATTITAIATGSG--HSLALVAPRP 428
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 154/350 (44%), Gaps = 27/350 (7%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV---GGMHTVCLTEDGKVYTWGC 95
VL G GQLG G +T + L EV G H++ +T G V WG
Sbjct: 64 VLAWGDNYYGQLGDG-TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGR 122
Query: 96 NDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
N G LG + + P V LP ++AG +HS+AL GTV+AWG +S G
Sbjct: 123 NAVGQLG-DGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGD--NSTGQ 179
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + TP+ + SG I +A+G H + LTS G + G GQLG T+ +
Sbjct: 180 LGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTN 239
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
S G+ P+ G ++ ++S G+ A+G N QLG+ S +
Sbjct: 240 RSTPVVVGL--------PVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDG-SNI 290
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+ + P T +A G HSLAL S G + ++G +++G+LG +
Sbjct: 291 NRDASVHVRLP------PGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLG-DGTARD 343
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
P + TIT++A G+ A+ S G + WG QLG+G
Sbjct: 344 RNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTT 393
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 128/279 (45%), Gaps = 25/279 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV-EVVVGGMHTVCLTEDGKVYT 92
T G V G TGQLG G A+ V+ V GGMH++ LT G V+
Sbjct: 164 TSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFA 223
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N G LG + + P V LP + I+ G SHS+A+ G AWG+ +
Sbjct: 224 WGDNSTGQLG-DGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGN--NF 280
Query: 151 HGSMGLKGEGIQKTP---LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G G I + ++L + + +A G H + LTS G +L+ G GQLG
Sbjct: 281 VGQLG-DGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDG 339
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
T R RN +S L PG V + D+F ++S G++LA+G N QLG+
Sbjct: 340 TAR--DRNTPGSVS-LPPG-VTITAVAAGDLF----GLALTSAGTVLAWGGNIVGQLGDG 391
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ V++ TP + T +A+G HSLAL
Sbjct: 392 TTTVRR-------TPVAASLPTATTITAIATGSGHSLAL 423
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 359
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 360 -YGAGGRLGIGGTESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 417
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 418 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 469
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 470 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 522
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 523 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 573
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 574 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 614
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 615 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 669
Query: 497 P 497
P
Sbjct: 670 P 670
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 299 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 357
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 358 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 417
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 418 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 472
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 473 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 525
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 526 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 578
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 579 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 633
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 634 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 384 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 441
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 442 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 494
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 495 IDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 552
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 553 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 602
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 603 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 654
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 655 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 687
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++SL+ + +A S HH LAL++ G+++++G D GRLG + + P+
Sbjct: 479 NSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I +L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG--LKGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3021
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 3022 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3081 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3132 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3185 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3236
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3237 -------------------DYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3277 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 180/422 (42%), Gaps = 63/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4016 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4074 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACITAAGDLFTWGKGRY 4125
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4126 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGN 378
YG+LG + S+ P I SL + + CG+ S A+ G +Y W + Y +LG+
Sbjct: 4179 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGH 4237
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
G +D V P + LQ K + +IA G+
Sbjct: 4238 GSDDH---------------------------VRRPRQVQGLQGKKVIAIATGSLHCVCC 4270
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ +
Sbjct: 4271 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTS 4325
Query: 496 KP 497
KP
Sbjct: 4326 KP 4327
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 3129
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3190 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3234
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3235 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3287 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 161/352 (45%), Gaps = 61/352 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG 180
VQ++ + + L +G VY D+ G P ++S++ IVKIA+
Sbjct: 455 VQVACAEKRFLILSRNGRVYTQAYNSDTLG------------PQLVQSLASRNIVKIAAH 502
Query: 181 AD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+D H++ L++ G + + GC + G+LG + + +S L + KH+ +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQA---GKHVVHI 557
Query: 239 FTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y+ I+++G + +G NY +LG SE Q P L+ L K ++
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDVS 610
Query: 298 --SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
SG +LA+ G+++++G DYG+LG + S+ P I LQD I + CG+
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQF 669
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEG 389
S A+ +G +Y WG G+ +LG+G E+ + L +
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDS 729
Query: 390 KIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+++++G +D + V++P EP +P L K I IACG SFA S
Sbjct: 730 EVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 172/415 (41%), Gaps = 60/415 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4074 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWG---KGRYGRL 4128
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 4129 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR-HDYGR 322
LG S+ K P I SL+ + G S+AL G +Y + DY R
Sbjct: 4182 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHR 4234
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4235 LG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG--- 4290
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4291 ------------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4321
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L+ +G+V++WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG---HGDTVPLEEPKMISALSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + +G + +LG E + P L++ L KK
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR-------YPKLLEGLKGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 52/293 (17%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACITAAGD 4116
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
++TWG +G GR GDSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4117 LFTWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T
Sbjct: 4174 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT------ 4225
Query: 202 GQLGRITQR---SASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAF 256
Q+ R R + + RR P +V L+ K + + TG ++ + G + +
Sbjct: 4226 WQVFRDYHRLGHGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4279
Query: 257 GLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G N+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++
Sbjct: 4280 GDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINRVACGSAHTLAWST 4324
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3075 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3107
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 3165
Query: 488 HSVILA 493
+ LA
Sbjct: 3166 DAQTLA 3171
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-IVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VYTWG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTED 87
+ G V + G GD G+LG G D + + ++ L +VV + G ++ +T +
Sbjct: 512 SANGEVFSWGCGDGGRLGHG-DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
G++YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++
Sbjct: 571 GELYTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G KTP +E + IVK+ G+ + LT G + T G +
Sbjct: 630 WGD--GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+LG T+ R LE LK K + DV G + ++ + ++G N+
Sbjct: 688 QRLGHGTEEHV-----RYPKLLE----GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 261 YSQ 263
Q
Sbjct: 739 QCQ 741
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 180/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LESV + V + SG H + L+S G + + G E
Sbjct: 4015 -YGAGGRLGIGGTESV-STPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4072
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4073 GKLGHGNRSPCDRP--RVVESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4124
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4125 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4178 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4228
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4229 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4269
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4270 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4324
Query: 497 PN 498
P
Sbjct: 4325 PT 4326
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2962 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3019
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3020 EATNGRLGLGLSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3078
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3079 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3129
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3130 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3182
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3183 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3234
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3235 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3274
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3275 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3324
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVL 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3072
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3073 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 3127
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3128 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3187
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3188 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3232
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3233 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3284
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3285 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L G VY D+ ++G + I+KIA+ +D
Sbjct: 456 QIACAEKRFLILSRSGRVYTQAYNSDALAPQLVQGLASR----------NIIKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE-------VIPVLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP+ +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3954 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 4012
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4013 TGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4072
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4073 --GKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4127
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4128 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4180
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4181 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4233
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4234 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4288
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4289 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2954 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3008
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3009 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3068
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H +TS G L T G
Sbjct: 3069 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3126
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3127 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3173
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3174 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3226
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3227 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3285
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3286 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3318
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3319 GSSHSVA 3325
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 177/381 (46%), Gaps = 57/381 (14%)
Query: 37 GVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
G V + G+ + G+LG G P R +VE L VV+V GG H+ C+T G +Y
Sbjct: 4062 GEVYSWGEAEDGKLGHGNRSPCDRPR----VVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117
Query: 92 TWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWG 145
TWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++WG
Sbjct: 4118 TWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWG 4174
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G K P+K++S++ G+VK+ G+ V LT G + T G + +
Sbjct: 4175 D--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4232
Query: 204 LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
LG + + RR P +V L+ K + + TG ++ + G + +G N+
Sbjct: 4233 LG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282
Query: 262 SQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIYAF 315
QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+ A
Sbjct: 4283 GQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPTSTGKLPAQ 4334
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
+Y L E L I+ + C C+ D +G L+ G+G
Sbjct: 4335 VPMEYNHL-----QEIPMIALRNRLLLLHHISELFC-PCIPM-FDLDGCLHETGLGPS-- 4385
Query: 376 LGNGKEDDILNSEGKIYAFGR 396
+G IL S+GK AF +
Sbjct: 4386 VGFDTLRGILISQGKEAAFRK 4406
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N++++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP+ +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2960 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3012
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3057
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3058 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3107
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3108 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3165
Query: 490 VILA 493
LA
Sbjct: 3166 QTLA 3169
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDE-VIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPSALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4217 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4275
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4276 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4016 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4074 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4125
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4126 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4179 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4229
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4230 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4270
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4271 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4325
Query: 497 P 497
P
Sbjct: 4326 P 4326
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 424 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 482
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 483 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 542
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 543 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 601
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 602 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 659
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 660 VAAGSTHCLALTE 672
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2965 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3022
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3023 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3082 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3132
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3133 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3185
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3186 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3237
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3238 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3277
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3278 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3327
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3075
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3076 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3130
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3131 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3190
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3191 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3235
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3236 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3287
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3288 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 401 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 450
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 451 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 492
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 493 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 545
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 546 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 604
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 605 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 664
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 665 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 722
Query: 439 DS 440
S
Sbjct: 723 SS 724
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4074 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4128
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4129 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4182 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4235 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4289
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4290 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2957 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3011
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3012 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3071
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3072 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3129
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3130 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3176
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3177 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3229
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3230 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3288
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3289 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3321
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3322 GSSHSVA 3328
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 4040 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 4097
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 4098 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 4150
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4151 VDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4208
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4209 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4258
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4259 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 4310
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 4311 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4343
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 496
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 554
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 555 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 603
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 604 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 656
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 657 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 714
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 715 GPAQSFAWSS 724
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2963 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3015
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3060
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3061 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3110
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3111 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3168
Query: 490 VILA 493
LA
Sbjct: 3169 QTLA 3172
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 567 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 620
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Query: 146 S 146
S
Sbjct: 681 S 681
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 513 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 571
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 572 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 628
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 629 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 687
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 688 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 733
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 460 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 517
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 518 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 576
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 577 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 204 LGRITQ 209
LG T+
Sbjct: 635 LGHGTE 640
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 192/456 (42%), Gaps = 95/456 (20%)
Query: 50 LGLGPDVMERKTFALVEDLDNVVEVVVGGM--HTVCLTE--DGKVYTWGCNDEGALGREA 105
LGLG ++ F L V + GG ++ E + VY+WG G LG +
Sbjct: 7 LGLGKNIFRSGEFKKKAILGAGVCLTAGGFIYQSILANEYPETIVYSWGYGGFGQLGLQN 66
Query: 106 EGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQ 162
E ++ + P + + KK ++ AG S S+AL +G VY+WG ++ G +G +
Sbjct: 67 E-NNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWG--KNKGGILGHEDRLSFN 123
Query: 163 KT-PLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
T P ++E + G I +I+ G H +T G + T G E G+LG + +
Sbjct: 124 MTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQ----- 178
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
++ +KR ++ ++Y Q DS +
Sbjct: 179 -------KIKIKRGNLS----------------------HDYLQ----DSML-------- 197
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P I+SL + K +A G ++ L+ +GK+Y FG + YG LG + VT P I
Sbjct: 198 --PQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIK 255
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
L D I I+ G AI +G LY WG QLGN +
Sbjct: 256 DLND--IVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQ------------------- 294
Query: 400 GRLGLKNVSEPVTEPTPIPSL-QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
S T+P+ + +I ++CG+ A+ +G LY WG G QLG+G
Sbjct: 295 --------SLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHG 346
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ D+ P +E KQ ++++A GG H+ + +
Sbjct: 347 NKSDLYAPRHVEFKQ----KIIKIACGGSHAAFITE 378
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 65 VEDLDNVV--EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
+E L N+ +V G TV L+EDGKVYT+G N G+LG ++ +S PQ +
Sbjct: 201 IESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI 260
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP---LKLESVSGIVKIAS 179
V+ISAG S A+ + G +Y WG+ R+ G +G Q P S + IV ++
Sbjct: 261 VKISAGYSFCAAITKQGKLYTWGNNRN--GQLGNSQSLYQTKPSIVTGFGSQNSIVDVSC 318
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G + LT +G L T G GQLG + P V K+K I
Sbjct: 319 GDNFIAALTQQGQLYTWGFGGDGQLGHGNKS----------DLYAPRHVEFKQKIIKIAC 368
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G + FI+ + FG + QLG + ++ + TP+L++ K+ + G
Sbjct: 369 GGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEA--SIRSTPNLVQYFKGKQVVDVTCG 426
Query: 300 QHHSLALNSE 309
H++A+ E
Sbjct: 427 GEHTIAITQE 436
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 179/439 (40%), Gaps = 87/439 (19%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGC 95
+V + G G GQLGL + T +E L + + +V G ++ LT +G+VY+WG
Sbjct: 50 IVYSWGYGGFGQLGL-QNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGK 108
Query: 96 NDEGALGREAEGDSEFI-PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G LG E P+ + L KK QIS G H A+ EDG VY WG+ G
Sbjct: 109 NKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGN--KEFG 166
Query: 153 SMGLKGEGIQKT-------------------PLKLESVSGI--VKIASGADHFVMLTSRG 191
+G + E Q+ P K+ES+ I ++A G V+L+ G
Sbjct: 167 KLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDG 226
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFI 247
+ T G + G LG ++ +++ P K ++D+ + I
Sbjct: 227 KVYTFGYNQYGSLGYVSDQNSVT-------------TPQLIKDLNDIVKISAGYSFCAAI 273
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL-SDKKFTMLASGQHHSLAL 306
+ +G + +G N QLG + S Q P ++ S ++ G + AL
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTK-------PSIVTGFGSQNSIVDVSCGDNFIAAL 326
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+G++Y +G G+LG N S+ + P + Q I IACG
Sbjct: 327 TQQGQLYTWGFGGDGQLGHGNKSD-LYAPRHVEFKQK--IIKIACG-------------- 369
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNV-SEPVTEPTP--IPSLQD 422
G + + ++Y FGR G+LG+ +NV SE TP + +
Sbjct: 370 ------------GSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKG 417
Query: 423 KTITSIACGNCVSFAIDSE 441
K + + CG + AI E
Sbjct: 418 KQVVDVTCGGEHTIAITQE 436
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2712 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2769
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 2770 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 2828
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 2829 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 2879
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 2880 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2933 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2984
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2985 -------------------DYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3025 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3074
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + +Q+ G+ A+ DG +YA G
Sbjct: 3706 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATG 3764
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3765 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3822
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 3823 GKLGHGNRSPCDRP--RVIESLRGIEV------VDIAAGGAHSACITAAGDLYTWGKGRY 3874
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 3875 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 3927
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3928 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3978
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3979 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4019
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4020 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4074
Query: 497 P 497
P
Sbjct: 4075 P 4075
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGK+++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 2822
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 2877
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2878 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2937
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 2938 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2982
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2983 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3034
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3035 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + + ++GG T+ +T DGK+Y
Sbjct: 3704 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYA 3762
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3763 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3822
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V IA+G H +T+ G+L T G +G+ GR+
Sbjct: 3823 --GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWG---KGRYGRL 3877
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 3878 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3930
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3931 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3983
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3984 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4038
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4039 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4069
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 201/457 (43%), Gaps = 67/457 (14%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 3789 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 3846
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV++ GG H+ C+T G +YTWG +G GR GDSE P+ V + +
Sbjct: 3847 ----VVDIAAGGAHSACITAAGDLYTWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRV 3899
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+ I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 3900 IDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 3957
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 3958 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4007
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4008 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINR 4059
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G H+LA ++ A + ++ E + P L I+ + C C+
Sbjct: 4060 VACGSAHTLAWSTSKPANAGKLPTQVPMEYNHLQEFLIIPLRNRLLLLHHISELFCP-CI 4118
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
D EG L G G +G IL S+GK AF + + PV E
Sbjct: 4119 PM-FDLEGRLD--ETGQGPSVGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVVELN 4175
Query: 416 PIPSLQDKTITSIA------------CGNCVSFAIDS 440
I + ++ +A C +SF+ DS
Sbjct: 4176 RIQVKRSRSKGGLAGPDGTKSVFGQMCAKMISFSPDS 4212
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2710 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 2822
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 2823 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 2855
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 2913
Query: 488 HSVILA 493
+ LA
Sbjct: 2914 DAQTLA 2919
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G +G K + V P L + IT IAC + G +Y + +G
Sbjct: 343 WGLIGWKYYAN-VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVV 401
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
++ G+++++G DYG+LG + S+ P I LQD + + CG+ S A+
Sbjct: 402 AVFSLIF--GQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 458
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
+G +Y WG G+ +LG+G E+ + P +EG Q
Sbjct: 459 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 34/171 (19%)
Query: 289 SDKKFTMLA-SGQHHSLALNSE-------------GKIYAFGRHDYGRLGLKNVSEPVTE 334
++K+F +L+ +G+ + A NS+ G+++++G DYG+LG + S+
Sbjct: 374 AEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKLG-RGGSDGCKT 432
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P I LQD + + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 433 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV---------- 482
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPS-----LQDKTITSIACGNCVSFAIDS 440
Y +L L+ + + + + L K I IACG SFA S
Sbjct: 483 ---RYPKL-LEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFAWSS 529
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
D GV F G + ++G +Y +LG S+ K TP LI+ L D +
Sbjct: 395 DTLVGVVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCK-------TPKLIEKLQDLDVVKV 447
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ-------------- 342
G S+AL +G++Y++G+ D RLG E V P + LQ
Sbjct: 448 RCGSQFSVALTKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQATLPQANCLSKKXX 506
Query: 343 ----DKTITSIACGNCVSFAIDS 361
K I IACG SFA S
Sbjct: 507 XXLDTKHIVGIACGPAQSFAWSS 529
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 45/174 (25%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P ++E+ ++DLD VV+V G +V LT+DG+
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSVALTKDGQ 462
Query: 90 VYTWGCNDEGALG----------REAEGDSEFIPQTVNLPKKA---------VQISAGDS 130
VY+WG D LG + EG +PQ L KK V I+ G +
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPA 522
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVK-IASGAD 182
S +AW S S S+GL+ + P+ E + +++ ++ G D
Sbjct: 523 QS---------FAWSSC--SEWSIGLRVPFVVDVCPMTFEQLDLLLRQVSEGMD 565
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3707 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3764
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3765 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 3816
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 3817 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3869
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3870 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3920
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3921 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 3961
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 3962 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4016
Query: 497 P 497
P
Sbjct: 4017 P 4017
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2656 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2713
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2714 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 2773 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2823
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 2824 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2876
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2877 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2928
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2929 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2968
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 2969 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3018
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2766
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 2767 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 2821
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2822 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2881
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 2882 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2926
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2927 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2978
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2979 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3646 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3704
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3705 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3764
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3765 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 3819
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 3820 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3872
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3873 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3925
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3926 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 3980
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 3981 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2648 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2702
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2703 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 2762
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 2763 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2820
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 2821 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2867
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 2868 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 2920
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 2921 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 2979
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 2980 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3012
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3013 GSSHSVA 3019
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 3754 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 3807
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 3808 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 3864
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 3865 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3922
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 3923 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3972
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 3973 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4024
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4025 AQVPMEYNHL 4034
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2654 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2706
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 2751
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 2752 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 2801
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 2802 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 2859
Query: 490 VILA 493
LA
Sbjct: 2860 QTLA 2863
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 42/216 (19%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P + L++ T +A + L L+ G++Y T+ +L
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVY-------------------TQAYNSDTL 437
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR 401
+ + +A N V A S+G Y L + G++Y++G D GR
Sbjct: 438 APQLVQGLASRNIVKIAAHSDGHHYL----------------ALAATGEVYSWGCGDGGR 481
Query: 402 LGLKNVSEPVTEPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
LG + + P+ EP I + K + IACG+ S AI +EG LY WG GN +LG+
Sbjct: 482 LGHGD-TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 540
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G +D PM + G L V+ VA G + LA
Sbjct: 541 GSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLA 574
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 3909 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 3967
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 3968 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 163/402 (40%), Gaps = 72/402 (17%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 449 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 505
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKI 177
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G ++ +
Sbjct: 506 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 563
Query: 178 ASGADHFVML------TSR---------GNLLTAGCPEQ---GQLGRITQRSASRNARRG 219
A G+ L T+R G L +G E QLG R +RG
Sbjct: 564 ACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESFRYNQLG-----VGCRCRQRG 618
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL-GEADSEVQKSGNTC 278
EP + LK F GV + + + F + S+ Q G
Sbjct: 619 W---EPPQEDLK------FFYGVLTRDVMLREGQIVFEAGRPGCVPTPVSSQKQALG--- 666
Query: 279 FFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPT 336
+ SL KK +A+G H LAL + +++++G +D + V++P EP
Sbjct: 667 YIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPA 724
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
+P L K I I CG S A S W +G G DI + F +
Sbjct: 725 ALPGLDAKHIMGITCGPAQSCAWSS---CSEWSIGLRVPFGA----DICS-----MTFEQ 772
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
D L L+ VSE + P Q+K ++A N + +
Sbjct: 773 LD---LLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRLQL 811
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 135/387 (34%), Gaps = 117/387 (30%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 410 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 459
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 460 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 501
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 502 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 554
Query: 288 LSDKKFTMLA--SGQHHSLAL--NSEGKIYAFGRHDYGRLGLKNVSE------------- 330
L K +A SG +LA+ N ++ R G L + V E
Sbjct: 555 LKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESFRYNQLGVGCRC 614
Query: 331 ------------------------------------PVTEPTPIPSLQDKTITSIACGNC 354
P PTP+ S Q + + I CG C
Sbjct: 615 RQRGWEPPQEDLKFFYGVLTRDVMLREGQIVFEAGRPGCVPTPVSS-QKQALGYIVCGGC 673
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR-LGLKNVSEPVTE 413
S + + G+ + L L + +++++G +D + V++P E
Sbjct: 674 SSLGPGKK--VIDVAAGSTHCLA-------LTEDSEVHSWGSNDQCQHFDTLRVTKP--E 722
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDS 440
P +P L K I I CG S A S
Sbjct: 723 PAALPGLDAKHIMGITCGPAQSCAWSS 749
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 185/422 (43%), Gaps = 57/422 (13%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K +E L ++ + +VGG T+ +T DGK+Y
Sbjct: 3179 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYA 3237
Query: 93 WGCNDEGAL---GREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G L G ++ + ++ K V +++G H++AL +G VY+WG D
Sbjct: 3238 TGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGED 3297
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G ++ IA G H +TS G L T G +G+ GR+
Sbjct: 3298 --GKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWG---KGRYGRL 3352
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT---FISSKGSILAFGLNNYSQL 264
+ R M+ LK + DV G ++ IS ++ ++G +Y +L
Sbjct: 3353 GHGDSEDQLRPKMAD------ALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKL 3406
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G S+ K P + +LS + G S+AL G +Y +G+ DY RLG
Sbjct: 3407 GRGGSDGCK-------VPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLG 3459
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ V P + +LQ K I SIA G+ A +G +Y WG + QLG+G
Sbjct: 3460 -HGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDG----- 3513
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ + P + +LQDK IT++ACG+ + A + L
Sbjct: 3514 ----------------------TTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPL 3551
Query: 445 YG 446
+
Sbjct: 3552 HA 3553
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 182/414 (43%), Gaps = 58/414 (14%)
Query: 89 KVYTWGCNDEGALG--REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV+ WG ND+ LG R ++ + + + ++ K V + G + +G VYA G
Sbjct: 2207 KVFVWGLNDKDQLGGPRGSKIKTPVLNEFLS-SLKVVCCAGGSKSLFVVTAEGKVYACG- 2264
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQG 202
++G +GL P ++ +S V K+A SG H + LT G + + G + G
Sbjct: 2265 -EGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 2323
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG +++ + + LE LK K I D+ G ++ ++S G + +GL Y
Sbjct: 2324 KLGHLSRMNCEKP-----RLLE----ALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEY 2374
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHD 319
+LG DS Q P L+K+L K+ +A G +L L EG +Y++G D
Sbjct: 2375 GRLGHGDSTTQ-------LRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG + SE + P + L + + I CG S A+ G ++ WG G+ ++LG+G
Sbjct: 2428 FGKLG-RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHG 2486
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+ V +P L+ K I +A G A+
Sbjct: 2487 TDSH---------------------------VRKPQVAEGLKGKKIIHVAVGALHCLAVT 2519
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G ++ WG + Q G+G +P ++G L + +VA G HS A
Sbjct: 2520 DTGQVFAWGDNDHGQQGDGSTTVNKKPALVQG--LEGVRITRVACGSSHSTAWA 2571
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 173/393 (44%), Gaps = 57/393 (14%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
GT+Y WG + G +G ++G + K P +ES++ + ++I G +T+ G L
Sbjct: 3181 GTIYGWG--HNHRGQLGGIEGAKV-KVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYA 3237
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTFISSKGS 252
G G+LG S S + LE ++ HI V G + +S +G
Sbjct: 3238 TGYGASGRLGIGGTDSVSTP-----TLLES----IQHVHIKKVAVNSGGKHALALSVEGE 3288
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ ++G +LG + T P +I+SL K+ +A G HS + S G++
Sbjct: 3289 VYSWGEGEDGKLGHGN-------RTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGEL 3341
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGM 370
Y +G+ YGRLG + SE P +L+ + +ACG + + I + ++ WG
Sbjct: 3342 YTWGKGRYGRLGHGD-SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGD 3400
Query: 371 GNGYQLGNGKED--------DILNS------------------EGKIYAFGRHDYGRLGL 404
G+ +LG G D D L+S G +Y +G+ DY RLG
Sbjct: 3401 GDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLG- 3459
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ V P + +LQ K I SIA G+ A +G +Y WG + QLG+G + I
Sbjct: 3460 HGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQ 3519
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
P + L + + VA G H+V + KP
Sbjct: 3520 RPRIVTA--LQDKKITNVACGSAHTVAWSTSKP 3550
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 164/354 (46%), Gaps = 34/354 (9%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDV---MERKTFALVEDLDNVVE 73
S KV + +L T G V CG+G G+LGLG + ++ L + + V
Sbjct: 2238 SLKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVA 2297
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHS 132
V GG H + LT DGKV++WG D+G LG + + E L K ++ I+ G SHS
Sbjct: 2298 VHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHS 2357
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLT 188
A+ G +Y WG +G +G Q P ++++ G ++++A G+ + LT
Sbjct: 2358 AAVTSSGELYTWG--LGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLT 2415
Query: 189 SRGNLLTAGCPEQGQLGRITQR--SASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNT 245
G + + G + G+LGR S N R L + + + G ++
Sbjct: 2416 DEGMVYSWGDGDFGKLGRGGSEGCSVPHNVER-----------LNGQGVIQIECGAQFSL 2464
Query: 246 FISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ G + +G +Y +LG DS V+K P + + L KK +A G H L
Sbjct: 2465 ALTKAGQVWTWGKGDYFRLGHGTDSHVRK--------PQVAEGLKGKKIIHVAVGALHCL 2516
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
A+ G+++A+G +D+G+ G + +P + L+ IT +ACG+ S A
Sbjct: 2517 AVTDTGQVFAWGDNDHGQQG-DGSTTVNKKPALVQGLEGVRITRVACGSSHSTA 2569
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 173/358 (48%), Gaps = 48/358 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNV----VEVVVGGMHTVC 83
TL T G + G G +G+LG+G D + T L+E + +V V V GG H +
Sbjct: 3225 TLFAVTADGKLYATGYGASGRLGIGGTDSVSTPT--LLESIQHVHIKKVAVNSGGKHALA 3282
Query: 84 LTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
L+ +G+VY+WG ++G LG + D + +++ K+ + I+ G +HS + G +
Sbjct: 3283 LSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLR-GKEVIDIACGGAHSACVTSSGEL 3341
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLLTAG 197
Y WG R +G +G Q P +++ G ++ +A SG + ++ N+ + G
Sbjct: 3342 YTWGKGR--YGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWG 3399
Query: 198 CPEQGQLGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
+ G+LGR + Q+ + ++ G+ +E G ++ ++
Sbjct: 3400 DGDYGKLGRGGSDGCKVPQKVDALSS-IGVCKVECG--------------SQFSIALTKS 3444
Query: 251 GSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + +G +Y +LG +D V++ P + +L KK +A+G H +A + +
Sbjct: 3445 GCVYTWGKGDYHRLGHGSDDHVRR--------PRKVAALQGKKIISIATGSLHCVACSDQ 3496
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G++Y +G +D G+LG + + P + +LQDK IT++ACG+ + A + L+
Sbjct: 3497 GEVYTWGDNDEGQLG-DGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLHA 3553
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 378 NGKEDDILNS---EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
N + DD S G IY +G + G+LG ++ V PT I SL I G
Sbjct: 3167 NRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAK-VKVPTAIESLTSLRPIQIVGGEQT 3225
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
FA+ ++G LY G G +LG G D + P +E Q + + V SGG+H++ L+
Sbjct: 3226 LFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALS 3284
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 280 FTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
TP L+ L ++KF +A G + +LA+ G +++FG DYG+LG + S+ P
Sbjct: 6 LTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLG-RGGSDGCKLPKL 64
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ LQ + CGN S + G +Y
Sbjct: 65 VDKLQGQHAVIACCGNQFSVILTKTGTVY 93
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3956 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4014 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4065
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4066 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4118
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4119 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4169
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4170 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4210
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4211 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4265
Query: 497 P 497
P
Sbjct: 4266 P 4266
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 424 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 482
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 483 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 542
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 543 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 601
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 602 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 659
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 660 VAAGSTHCLALTE 672
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2904 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 2961
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2962 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3019
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3020 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3070
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3071 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3123
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3124 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3176
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3177 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3215
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3216 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3266
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3014
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3015 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3069
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3070 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3129
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3130 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3174
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3175 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3226
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3227 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 400 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRN----------IVKIAAHSD 449
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 491
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 492 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 544
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 545 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 603
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 663
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 664 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIACGPAQSFA 721
Query: 438 IDS 440
S
Sbjct: 722 WSS 724
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3895 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3953
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3954 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4014 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4068
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4069 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4121
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4122 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4174
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4175 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4229
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4230 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2896 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2950
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2951 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3010
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3011 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3068
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3069 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3115
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3116 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3168
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3169 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3227
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3228 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3260
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3261 GSSHSVA 3267
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4003 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4056
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4057 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4113
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4114 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4171
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4172 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4221
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4222 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4273
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4274 AQVPMEYNHL 4283
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 496
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 554
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 555 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 603
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 656
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 657 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIAC 714
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 715 GPAQSFAWSS 724
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2902 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 2999
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3000 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3049
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3050 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3107
Query: 490 VILA 493
LA
Sbjct: 3108 QTLA 3111
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 567 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 620
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
S L+ + T L IV IA G
Sbjct: 681 SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 513 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 571
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 572 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 628
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 629 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 687
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 688 FDTLRVTKP-------------EPTALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 733
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 460 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 517
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 518 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 576
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 577 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 204 LGRITQ 209
LG T+
Sbjct: 635 LGHGTE 640
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4158 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4216
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4217 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 4035 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 4092
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 4093 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 4145
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4203
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4253
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4254 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 4305
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4338
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4042 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4099
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4100 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4151
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4152 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4204
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4205 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4255
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4256 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4296
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4297 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4351
Query: 497 P 497
P
Sbjct: 4352 P 4352
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3981 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4039
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4040 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4099
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4100 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4154
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4155 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4207
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4208 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4260
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4261 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4315
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4316 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4089 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4142
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4143 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4199
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4200 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4257
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4258 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4307
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4308 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4359
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4360 AQVPMEYNHL 4369
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4244 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4302
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4303 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4346
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4079 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4136
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4137 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4188
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4189 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4241
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4242 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4292
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4293 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4333
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4334 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4388
Query: 497 P 497
P
Sbjct: 4389 P 4389
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 547 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 605
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 606 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 665
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 666 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 724
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 725 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 782
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 783 VAAGSTHCLALTE 795
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 3027 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3084
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3085 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3142
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3143 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3193
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3194 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3246
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3247 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3299
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3300 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3338
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3339 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3389
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3137
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3138 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3192
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3193 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3252
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3253 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3297
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3298 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3349
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3350 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 523 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 572
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 573 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 614
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 615 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 667
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 668 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 726
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 786
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 787 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIACGPAQSFA 844
Query: 438 IDS 440
S
Sbjct: 845 WSS 847
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 4018 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4076
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4077 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4136
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4137 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4191
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4192 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4244
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4245 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4297
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4298 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4352
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4353 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 3019 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3073
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3074 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3133
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3134 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3191
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3192 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3238
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3239 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3291
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3292 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3350
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3351 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3383
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3384 GSSHSVA 3390
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4179
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4180 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4236
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4237 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4294
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4295 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4344
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4345 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4396
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4397 AQVPMEYNHL 4406
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 563 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 619
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 620 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 677
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 678 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 726
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 779
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 780 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIAC 837
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 838 GPAQSFAWSS 847
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 3025 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3077
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3122
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3123 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3172
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3173 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3230
Query: 490 VILA 493
LA
Sbjct: 3231 QTLA 3234
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 690 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 743
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 744 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803
Query: 146 S 146
S
Sbjct: 804 S 804
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 636 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 694
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 695 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 751
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 752 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 810
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 811 FDTLRVTKP-------------EPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 856
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 583 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 640
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 641 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 699
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 700 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757
Query: 204 LGRITQ 209
LG T+
Sbjct: 758 LGHGTE 763
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4281 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4339
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4340 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4383
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 521 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 579
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 580 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 639
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 640 VAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 698
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 699 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 756
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 757 VAAGSTHCLALTE 769
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 498 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 547
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 548 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 589
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 590 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 642
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 643 LKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 701
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 702 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 761
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 762 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 819
Query: 439 DS 440
S
Sbjct: 820 SS 821
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 537 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 593
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 594 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 651
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 652 ACGSGDAQTLAVTDNGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 700
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 701 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 753
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 754 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 811
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 812 GPAQSFAWSS 821
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 664 TDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 717
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 718 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 777
Query: 146 S 146
S
Sbjct: 778 S 778
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +T++G+
Sbjct: 610 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTDNGQ 668
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 669 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 725
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 726 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 784
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 785 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 830
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 557 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 614
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ ++G V++WG
Sbjct: 615 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWG 673
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 674 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 731
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG T+ R LE L+ K + DV G + ++ + ++G N+
Sbjct: 732 LGHGTEEHV-----RYPKLLE----GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 782
Query: 263 Q 263
Q
Sbjct: 783 Q 783
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 675 NSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 733
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 734 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 793
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 794 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 852
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 853 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 910
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 911 VAAGSTHCLALTE 923
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 150/354 (42%), Gaps = 83/354 (23%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
QI+ + + L +G VY D+ ++G + I+KIA+ +D
Sbjct: 651 TQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IIKIAAHSD 700
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 701 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 742
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 743 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 795
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 796 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 854
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 914
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
L + +++++G +D + V++P EP+ +P L K I IACG
Sbjct: 915 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIACG 966
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 43/301 (14%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N++++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 691 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 747
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 748 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 805
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 806 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 854
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 907
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP+ +P L K I IAC
Sbjct: 908 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIAC 965
Query: 352 G 352
G
Sbjct: 966 G 966
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 818 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 871
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 872 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 931
Query: 146 S 146
S
Sbjct: 932 S 932
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 711 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 768
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 769 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 827
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 828 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 885
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG T+ R LE L+ K + DV G + ++ + ++G N+
Sbjct: 886 LGHGTEEHV-----RYPKLLE----GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 936
Query: 263 Q 263
Q
Sbjct: 937 Q 937
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 764 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 822
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 823 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 879
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 880 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 937
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4013 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4071 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4123 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4226
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4227 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4267
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4322
Query: 497 P 497
P
Sbjct: 4323 P 4323
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3180
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3233
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3234 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 455 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 504
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 546
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 599
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 658
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIACGPAQSFA 776
Query: 438 IDS 440
S
Sbjct: 777 WSS 779
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4071 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4125
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4126 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4179 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4231
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4232 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4286
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4287 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4113
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4114 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4171 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4229 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4279 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4330
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4331 AQVPMEYNHL 4340
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4273
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4274 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3758 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3815
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3816 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 3867
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 3868 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3920
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3921 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3971
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3972 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4012
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4013 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4067
Query: 497 P 497
P
Sbjct: 4068 P 4068
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3697 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3755
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3756 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3815
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3816 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 3870
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 3871 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3923
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3924 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3976
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3977 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4031
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4032 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 3805 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 3858
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 3859 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 3915
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 3916 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3973
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 3974 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4023
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4024 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4075
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4076 AQVPMEYNHL 4085
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 163/388 (42%), Gaps = 63/388 (16%)
Query: 89 KVYTWGCNDEGALG--REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV++WG ND+ LG + + +T++ VQ++ G A+ +G VYA G
Sbjct: 2711 KVFSWGLNDKDQLGGLKNKKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACGE 2769
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI-------VKIASGADHFVMLTSRGNLLTAGCP 199
+ GL G P+ ++ + V + SG G + + G
Sbjct: 2770 -ATKWPAWGL-GISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEG 2827
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGL 258
+ G+LG SR R +E LK K I D+ G ++ ++S G + +GL
Sbjct: 2828 DDGKLGHF-----SRMPR----LIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGL 2874
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFG 316
Y +LG D NT P ++K L + +A G +LAL EG +++ G
Sbjct: 2875 GEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLG 2927
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
D ++G + P I L + + I CG S A+ GV++ WG G+ ++L
Sbjct: 2928 DGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2987
Query: 377 GNGKEDDI---------------------------LNSEGKIYAFGRHDYGRLGLKNVSE 409
G+G + + + G++YA+G +D+G+ G +
Sbjct: 2988 GHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQG-NGTTT 3046
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA 437
+PT + L+ + IT +ACG+ S A
Sbjct: 3047 VNRKPTLVQGLEGQKITRVACGSSHSVA 3074
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 162/393 (41%), Gaps = 74/393 (18%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
V++WG D GLK + I K P E++S +V++A G+ +T G + G
Sbjct: 2712 VFSWG-LNDKDQLGGLKNKKI-KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG- 2768
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD----------VFTGVYNT-FI 247
A++ G+ + G VP+ I V +G T F
Sbjct: 2769 ------------EATKWPAWGLG-ISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFX 2815
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
G + ++G + +LG P LI++L K+ +A G HS AL
Sbjct: 2816 PVDGKVFSWGEGDDGKLGHFSR-----------MPRLIEALKTKRIRDIACGSSHSAALT 2864
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G++Y +G +YGRLG + + + +P + L + +ACG + + A+ EG++
Sbjct: 2865 SSGELYTWGLGEYGRLGHGDNTTQL-KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 2923
Query: 366 YGWGMGNGYQLGNGKEDD---------------------------ILNSEGKIYAFGRHD 398
+ G G+ +++G G E L G ++ +G+ D
Sbjct: 2924 FSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2983
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC-GNCVSFAIDSEGVLYGWGMGNGYQLGN 457
Y RLG V +P + L+ K I + +C G A+ G +Y WG + Q GN
Sbjct: 2984 YFRLG-HGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGN 3042
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +P ++G L + +VA G HSV
Sbjct: 3043 GTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3073
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 57/293 (19%)
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAW 144
DGKV++WG D+G LG + +P+ + K+ I+ G SHS AL G +Y W
Sbjct: 2818 DGKVFSWGEGDDGKLGHFSR-----MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2872
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAG 197
G G G G G T LK + V ++++A G+ + LT G + + G
Sbjct: 2873 GL-----GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLG 2927
Query: 198 CPEQGQLGRI----------TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
G L +I ++ R +G+ +E G ++ +
Sbjct: 2928 ---DGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECG--------------AQFSLAL 2970
Query: 248 SSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA-SGQHHSLA 305
+ G + +G +Y +LG +D V+K P +++ L KK + SG H LA
Sbjct: 2971 TKSGVVWTWGKGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVACSCSGALHCLA 3022
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ G++YA+G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3023 VTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 38/245 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + ++GLN+ QLG ++ K P ++LS +A G A+ E
Sbjct: 2709 RTKVFSWGLNDKDQLGGLKNKKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2761
Query: 310 GKIYAFGRH-DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
GK+YA G + GL S V PIP IT+++ S+ + V G
Sbjct: 2762 GKVYACGEATKWPAWGLGISSGTV----PIPH---GXITALS-----SYVVKKVAVHSG- 2808
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
Q G D GK++++G D G+LG + P I +L+ K I I
Sbjct: 2809 ----TSQTGFXPVD------GKVFSWGEGDDGKLGHFS-----RMPRLIEALKTKRIRDI 2853
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
ACG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRD 2911
Query: 489 SVILA 493
+ LA
Sbjct: 2912 AQTLA 2916
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 43/287 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G+GD G+LG M R AL + ++ G H+ LT G++YTWG
Sbjct: 2819 GKVFSWGEGDDGKLGHF-SRMPRLIEAL--KTKRIRDIACGSSHSAALTSSGELYTWGLG 2875
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAG--DSHSVALLEDGTVYAWGSFRDSHG 152
+ G LG + ++ P+ V L + +Q++ G D+ ++AL ++G V++ G G
Sbjct: 2876 EYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGD-----G 2929
Query: 153 SMGLKGEGIQ----KTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ G G + P +E ++ G+ +I GA + LT G + T G + +LG
Sbjct: 2930 DLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2989
Query: 207 ----ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
++ RG +K + +G + ++ G + A+G N++
Sbjct: 2990 GSDVHVRKPQVVEGLRG------------KKIVACSCSGALHCLAVTDSGQVYAWGDNDH 3037
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
Q G + V + P L++ L +K T +A G HS+A +
Sbjct: 3038 GQQGNGTTTVNRK-------PTLVQGLEGQKITRVACGSSHSVAWTT 3077
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 3960 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4018
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4019 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G+V + G GD ++G GP+V +E L+ V ++ G ++ LT+ G V+
Sbjct: 2918 TDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2977
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQIS-AGDSHSVALLEDGTVYAWGSFR 148
TWG D LG ++ PQ V KK V S +G H +A+ + G VYAWG
Sbjct: 2978 TWGKGDYFRLGHGSDVHVR-KPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGD-- 3034
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
+ HG G + + P ++ + G I ++A G+ H V T+
Sbjct: 3035 NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3077
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++SL+ + +A S HH LAL++ G+++++G D GRLG + + P+
Sbjct: 479 NSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I +L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG--LKGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3021
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 3022 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3081 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3132 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3185 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3236
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3237 -------------------DYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3277 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 178/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+ G + + G E
Sbjct: 4016 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAED 4073
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I++ G + +G Y
Sbjct: 4074 GKLGHGNRSPCDRP--RVIESLRGIEV------VDIAAGGAHSACITAAGDLFTWGKGRY 4125
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4126 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4179 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4229
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4230 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4270
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4271 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 4325
Query: 497 P 497
P
Sbjct: 4326 P 4326
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 3129
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3190 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3234
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3235 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3287 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 161/352 (45%), Gaps = 61/352 (17%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG 180
+Q++ + + L +G VY D+ G P ++S++ IVKIA+
Sbjct: 455 MQVACAEKRFLILSRNGRVYTQAYNSDTLG------------PQLVQSLASRNIVKIAAH 502
Query: 181 AD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+D H++ L++ G + + GC + G+LG + + +S L + KH+ +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQA---GKHVVHI 557
Query: 239 FTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y+ I+++G + +G NY +LG SE Q P L+ L K ++
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDVS 610
Query: 298 --SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
SG +LA+ G+++++G DYG+LG + S+ P I LQD I + CG+
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQF 669
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEG 389
S A+ +G +Y WG G+ +LG+G E+ + L +
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDS 729
Query: 390 KIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+++++G +D + +++P EP +P L K I IACG SFA S
Sbjct: 730 EVHSWGSNDQCQHFDTLRITKP--EPAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAED 4073
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V IA+G H +T+ G+L T G +G+ GR+
Sbjct: 4074 --GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG---KGRYGRL 4128
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 4129 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4182 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4235 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4289
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 4290 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 47/290 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV++ GG H+ C+T G
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDIAAGGAHSACITAAGD 4116
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
++TWG +G GR GDSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4117 LFTWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4174 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4232 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4281
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++
Sbjct: 4282 DEGQLGDGTTNAIQR--------PRLVAALQGKKINRVACGSAHTLAWST 4323
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 39/308 (12%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L+ +G+V++WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG---HGDTVPLEEPKMISALSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E L+ I
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIEK----LQDLDI 660
Query: 236 DDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V G ++ ++ G + +G + +LG E + P L++ L KK
Sbjct: 661 VKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR-------YPKLLEGLKGKKVI 713
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A+G H LAL + +++++G +D + +++P EP +P L K I IACG
Sbjct: 714 DVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKP--EPAALPGLDTKHIVGIACGP 771
Query: 354 CVSFAIDS 361
SFA S
Sbjct: 772 AQSFAWSS 779
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3075 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3107
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 3165
Query: 488 HSVILA 493
+ LA
Sbjct: 3166 DAQTLA 3171
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-IVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VYTWG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTED 87
+ G V + G GD G+LG G D + + ++ L +VV + G ++ +T +
Sbjct: 512 SANGEVFSWGCGDGGRLGHG-DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
G++YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++
Sbjct: 571 GELYTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G KTP +E + IVK+ G+ + LT G + T G +
Sbjct: 630 WGD--GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
+LG T+ R LE LK K + DV G + ++ + ++G N+
Sbjct: 688 QRLGHGTEEHV-----RYPKLLE----GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 261 YSQ 263
Q
Sbjct: 739 QCQ 741
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4218 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4276
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4277 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4006 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4063
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4064 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4115
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4116 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4168
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4169 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4219
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4220 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4260
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4261 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4315
Query: 497 P 497
P
Sbjct: 4316 P 4316
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2955 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3013 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3072 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3122
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3123 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3175
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3176 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3227
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3228 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3267
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3268 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3317
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3065
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3066 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3120
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3121 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3180
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3181 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3225
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3226 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3277
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3278 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3945 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4003
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4004 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4063
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4064 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4118
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4119 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4171
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4172 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4224
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4225 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4279
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4280 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2947 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3001
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3002 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3061
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3062 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3119
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3120 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3166
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3167 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3219
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3220 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3278
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3279 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3311
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3312 GSSHSVA 3318
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4053 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4106
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4107 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4163
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4164 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4221
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4222 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4271
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4272 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4323
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4324 AQVPMEYNHL 4333
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2953 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3005
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3050
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3051 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3100
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3101 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3158
Query: 490 VILA 493
LA
Sbjct: 3159 QTLA 3162
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4208 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4266
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4267 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4310
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 177/407 (43%), Gaps = 52/407 (12%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY WG ND+ LG + + +L K K V I+ G + ++G +YA G
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2970
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ +G G + P+ S I K+A SG H + LT G + + G E G+LG
Sbjct: 2971 NGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGH 3030
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLG 265
S + +E LK K I DV G ++ I+S G + +GL Y +LG
Sbjct: 3031 GNCSSLDKP-----RLIE----SLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLG 3081
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRL 323
D+ Q P L++SL ++ +A G ++AL ++G +Y++G D+G+L
Sbjct: 3082 HGDTNTQ-------LKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKL 3134
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + S+ P + L + I CG S A+ G ++ WG G+ ++LG+G +
Sbjct: 3135 G-RGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHH 3193
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
V +PT + L+ K + +A G A+ G
Sbjct: 3194 ---------------------------VRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQ 3226
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+Y WG + Q GNG +P + +L++ V +V+ G HS+
Sbjct: 3227 VYAWGDNDHGQQGNGSTIVNKKPSLVH--ELDDARVNRVSCGSSHSI 3271
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 36/244 (14%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P + SDK M+AS G+H+ LAL + +Y++G D GRLG + + EP I
Sbjct: 495 PQRVYGFSDKFVAMIASHPDGKHY-LALTEDSSVYSWGNGDGGRLGHGDRTW-YEEPKLI 552
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------- 385
SL DK IT IACG+ S A+ S G LY WG GN +LG+G DD++
Sbjct: 553 ESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMI 612
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ G ++++G DYG+LG + T P + L D + + C
Sbjct: 613 VYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKT-PKIVDKLLDINVAKVYC 671
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ + G +Y WG G Y+LG+G E+ + P IE L V ++ G H +
Sbjct: 672 GGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEA--LKTKKVKELCVGSLHVL 729
Query: 491 ILAK 494
L +
Sbjct: 730 ALTE 733
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 169/391 (43%), Gaps = 67/391 (17%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P+ ES+S + V++ G +T+ G +
Sbjct: 3896 GAIYGWG--HNHRGQLGGLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3952
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G +GR+ G+ + +P + I VF G + +
Sbjct: 3953 TG---YGAVGRL-----------GIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLAL 3998
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P LI+ L + +A G HHS A+
Sbjct: 3999 SSEGHVYSWGEGDDGKLGHGN-------RLSYDRPKLIEELLGTEIVDVACGGHHSAAIT 4051
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + + +T P + +LQD + +ACG + + + + +
Sbjct: 4052 SAGWLYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4110
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G IY +G+ DY
Sbjct: 4111 WSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDY 4170
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4171 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGT 4229
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ P + L + +VA G H++
Sbjct: 4230 TCALQRPRLVHA--LQGKKITRVACGSAHTL 4258
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 180/417 (43%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K L E L + V + GG T+ +T DGKVY
Sbjct: 3894 GSGAIYGWGHNHRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3952
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GA+GR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 3953 TG---YGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4009
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G P +E + G IV +A G H +TS G L T G +G+
Sbjct: 4010 GDD--GKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWG---KGRY 4064
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + L P V L+ + DV G ++ ++ ++G +
Sbjct: 4065 GRLGHGDSEDQ-------LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4117
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I+SL+ + G S+AL G IY +G+ DY
Sbjct: 4118 YGKLGRGGSDGCK-------VPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDY 4170
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4171 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG- 4228
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K IT +ACG+ + A
Sbjct: 4229 --------------------------TTCALQRPRLVHALQGKKITRVACGSAHTLA 4259
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 165/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V G G G+LG+G P ++E V+ V V GG H
Sbjct: 3940 TLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKK----VAVNSGGKHC 3995
Query: 82 VCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ L+ +G VY+WG D+G LG R + + I + L + V ++ G HS A+
Sbjct: 3996 LALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDVACGGHHSAAITSA 4053
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLL 194
G +Y WG R +G +G Q TP +E++ ++ +A SG + +T N+
Sbjct: 4054 GWLYTWGKGR--YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4111
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTF 246
+ G + G+LG RG S + +VP+K + + + GV ++
Sbjct: 4112 SWGDGDYGKLG------------RGGS--DGCKVPMKIESLAGL--GVIKVECGSQFSVA 4155
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ GSI +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4156 LTRSGSIYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4207
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ +G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4208 CSDKGEVFTWGDNDEGQLG-DGTTCALQRPRLVHALQGKKITRVACGSAHTLA 4259
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 44/347 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D E K L + + V V GG H + LT
Sbjct: 2953 TLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALT 3012
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQ-ISAGDSHSVALLEDGTVYA 143
+DG+V++WG ++G LG S P+ + +L K ++ ++ G HS A+ G +Y
Sbjct: 3013 QDGRVFSWGEGEDGKLG-HGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYT 3071
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCP 199
WG +G +G Q P ++S+ G ++++A G+ + LT+ G++ + G
Sbjct: 3072 WG--LGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3129
Query: 200 EQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
+ G+LGR T R G+ +E G ++ ++ G +
Sbjct: 3130 DFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECG--------------AQFSLALTKYGEV 3175
Query: 254 LAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+G +Y +LG D V+K P L++ L KK +A G H LA+ G++
Sbjct: 3176 WTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKVIHVAVGALHCLAVTDTGQV 3227
Query: 313 YAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
YA+G +D+G+ G N S V +P+ + L D + ++CG+ S A
Sbjct: 3228 YAWGDNDHGQQG--NGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3272
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 49/256 (19%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC------FFTPHLIKSLSDKKFTMLASGQ 300
+S +G + A G +LG D GN C F + ++IK ++ + SG
Sbjct: 2957 VSQEGKLYACGEGTNGRLGLGDD-----GNACEPKPIPFLSQYVIKKVA------VHSGG 3005
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H+LAL +G+++++G + G+LG N S + +P I SL+ K I +ACG+ S AI
Sbjct: 3006 KHALALTQDGRVFSWGEGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACGSGHSAAIT 3064
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
S G LY WG+G +YGRLG + + + +P + SL
Sbjct: 3065 SSGELYTWGLG--------------------------EYGRLGHGDTNTQL-KPKLVQSL 3097
Query: 421 QDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
+ + +ACG + + A+ ++G +Y WG G+ +LG G D P+ ++ +LN
Sbjct: 3098 VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVD--RLNGLG 3155
Query: 479 VLQVASGGQHSVILAK 494
V+Q+ G Q S+ L K
Sbjct: 3156 VVQIECGAQFSLALTK 3171
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
G H + LTED VY+WG D G LG R + + I V+ K I+ G ++S A
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVD--KNITFIACGSTYSAA 572
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSR 190
L +G +Y WG R ++G +G P + +++G IV +A SG + +T+
Sbjct: 573 LSSNGELYTWG--RGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTAS 630
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISS 249
G + + G + G+LGR N + ++ L ++ V+ G ++ +++
Sbjct: 631 GIVFSWGDGDYGKLGR-----GGCNGSKTPKIVD----KLLDINVAKVYCGGQFSAALTA 681
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + +G +LG + E + P I++L KK L G H LAL +
Sbjct: 682 YGEVYTWGKGEAYRLGHGNEEHVR-------YPKAIEALKTKKVKELCVGSLHVLALTED 734
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+Y +GR+DYG++ + V+EPT P+L K + + CG SFA
Sbjct: 735 QLVYGWGRNDYGQID-PALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFA 782
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 49/295 (16%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
+ IAS D H++ LT ++ + G + G+LG R +E L
Sbjct: 506 VAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGH-----GDRTWYEEPKLIES----LV 556
Query: 232 RKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
K+I + G Y+ +SS G + +G NY +LG +S+ P L+ +L+
Sbjct: 557 DKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDD-------VMVPTLVSALNG 609
Query: 291 KKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+A SG +L + + G ++++G DYG+LG + T P + L D +
Sbjct: 610 HMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKT-PKIVDKLLDINVAK 668
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------------ 384
+ CG S A+ + G +Y WG G Y+LG+G E+ +
Sbjct: 669 VYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHV 728
Query: 385 --LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +Y +GR+DYG++ + V+EPT P+L K + + CG SFA
Sbjct: 729 LALTEDQLVYGWGRNDYGQID-PALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFA 782
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 146/312 (46%), Gaps = 41/312 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V + G+G+ G+LG G + L+E L + + +V G H+ +T G++Y
Sbjct: 3012 TQDGRVFSWGEGEDGKLGHG-NCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELY 3070
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAG--DSHSVALLEDGTVYAWGSF 147
TWG + G LG + +++ P+ V + ++ +Q++ G D+ ++AL DG+VY+WG
Sbjct: 3071 TWGLGEYGRLG-HGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGD- 3128
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +G G TPL ++ ++ G+V+I GA + LT G + T G + +LG
Sbjct: 3129 -GDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3187
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
+ + R + +E L+ K + V G + ++ G + A+G N++ Q
Sbjct: 3188 H-----GNDHHVRKPTLVE----GLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3238
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + V K P L+ L D + ++ G HS+A + A
Sbjct: 3239 GNGSTIVNKK-------PSLVHELDDARVNRVSCGSSHSIAWVLTDQPAA---------- 3281
Query: 325 LKNVSEPVTEPT 336
N EPVT PT
Sbjct: 3282 --NNQEPVTFPT 3291
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ +GLN+ QLG K P +SLS K +A G ++ EGK
Sbjct: 2910 AVYVWGLNDKDQLGGLKGSKIK-------LPVYSESLSKLKPVHIAGGSKTLFVVSQEGK 2962
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+YA G GRLGL + EP PIP L I +A +
Sbjct: 2963 LYACGEGTNGRLGLGDDGN-ACEPKPIPFLSQYVIKKVAVHS------------------ 3003
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
GK L +G+++++G + G+LG N S + +P I SL+ K I +ACG
Sbjct: 3004 ------GGKHALALTQDGRVFSWGEGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACG 3056
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S AI S G LY WG+G +LG+G + L+P ++ L V+QVA G + +
Sbjct: 3057 SGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQS--LVGQRVIQVACGSRDAQT 3114
Query: 492 LA 493
+A
Sbjct: 3115 MA 3116
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 303 SLALNSEGKIYAFGRHDYGRL-GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+L+ + G IY +G + G+L GL+ V P SL + G FA+ +
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGEQTLFAVTA 3946
Query: 362 EGVLYGWGMGNGYQLGNGKEDDI----------------------------LNSEGKIYA 393
+G +Y G G +LG G D + L+SEG +Y+
Sbjct: 3947 DGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4006
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G D G+LG N P I L I +ACG S AI S G LY WG G
Sbjct: 4007 WGEGDDGKLGHGN-RLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYG 4065
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+LG+G +D L P +E L +Y V+ VA G
Sbjct: 4066 RLGHGDSEDQLTPKLVEA--LQDYKVIDVACG 4095
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G GD G+LG G KT +V+ L NV +V GG + LT G+
Sbjct: 626 CVTASGIVFSWGDGDYGKLGRG-GCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGE 684
Query: 90 VYTWGCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
VYTWG +G R G+ E + P+ + KK ++ G H +AL ED VY WG
Sbjct: 685 VYTWG---KGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWG 741
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG 173
R+ +G + I P ++SG
Sbjct: 742 --RNDYGQIDPALGTIVSEPTLCPTLSG 767
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G D + L+E L N+ + G ++ L+ +G++YTWG
Sbjct: 527 VYSWGNGDGGRLGHG-DRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRG 585
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ G LG D +P V+ V +GDS ++ + G V++WG +G
Sbjct: 586 NYGRLG-HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGD--GDYG 642
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G G KTP ++ + I K+ G LT+ G + T G E +LG +
Sbjct: 643 KLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEE 702
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
R +E LK K + ++ G + ++ + +G N+Y Q+ A
Sbjct: 703 HV-----RYPKAIE----ALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPA-- 751
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
T P L +LS K L G S A
Sbjct: 752 -----LGTIVSEPTLCPTLSGKNVIGLVCGPTQSFA 782
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLG------------------------NGKEDDI--LNSEG 389
+ + D G +YGWG + QLG G E + + ++G
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADG 3948
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 447
K+YA G GRLG+ ++ V PT + S+Q + +A G A+ SEG +Y W
Sbjct: 3949 KVYATGYGAVGRLGIGG-TDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSW 4007
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G G+ +LG+G P IE +L ++ VA GG HS +
Sbjct: 4008 GEGDDGKLGHGNRLSYDRPKLIE--ELLGTEIVDVACGGHHSAAI 4050
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVV----GGMHTVCLTED 87
+ G + T G+G+ G+LG G DVM LV L+ + V V G T+C+T
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDDVM---VPTLVSALNGHMIVYVACGSGDSQTLCVTAS 630
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWG 145
G V++WG D G LGR S+ P+ V+ L ++ G S AL G VY WG
Sbjct: 631 GIVFSWGDGDYGKLGRGGCNGSK-TPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWG 689
Query: 146 ---SFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPE 200
++R HG+ E + P +E++ + ++ G+ H + LT + G +
Sbjct: 690 KGEAYRLGHGN-----EEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRND 744
Query: 201 QGQL 204
GQ+
Sbjct: 745 YGQI 748
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 389 GKIYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
G IY +G + G+LG L+ V P SL + G FA+ ++G +Y
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 3953
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G G +LG G D ++ P +E Q + V SGG+H + L+
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALS 3999
>gi|323356879|ref|YP_004223275.1| alpha-tubulin suppressor [Microbacterium testaceum StLB037]
gi|323273250|dbj|BAJ73395.1| alpha-tubulin suppressor [Microbacterium testaceum StLB037]
Length = 1866
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 153/339 (45%), Gaps = 26/339 (7%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV 75
PS V V+S AV + G V T G D G+LG + + V L V ++
Sbjct: 1084 PSPVVQVSSGAVHAMALLRDGSV-WTAGLYDYGRLGRSTSTVPGTQWGQVPGLSGVTQIA 1142
Query: 76 VGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
G ++ L DG V WG N G G D + LPKK + + AG + + +
Sbjct: 1143 AGWNNSYALLSDGTVMAWGWNIWGQCGDGTNTDRYSPVAVIGLPKKVISLVAGRVNGLVV 1202
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
LED T AWG+ ++ G +G TP+ + ++SG+VK+A G D L S G++
Sbjct: 1203 LEDNTAMAWGA-SNASGQLGNGSTSNSSTPVVISNISGVVKLAGGNDTHSALLSDGSVWA 1261
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFIS-SKGSI 253
G GQ+G T ++ L P V L + D+ G + S GSI
Sbjct: 1262 WGANANGQVGDGTT----------VTRLTP--VKLSGVTGVKDIARGGDAGYAQLSDGSI 1309
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G N Y Q+G+ + T ++P + LS+ LA G ++ AL S+G
Sbjct: 1310 SGWGSNAYGQVGDGST-------TDRWSPVPVSGLSN--VVQLAGGYYNGYALQSDGSAK 1360
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
A+GR+D G+LG N S P + L K +TS+A G
Sbjct: 1361 AWGRNDAGQLG-NNSSTQSASPVTVQGLNGKPVTSLATG 1398
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 164/375 (43%), Gaps = 59/375 (15%)
Query: 149 DSHGSMGLKGEGIQKTPLKLESV-----SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
D G +G+ G TPL V S +V+++SGA H + L G++ TAG + G+
Sbjct: 1059 DGQGHLGIDNSG--STPLMPVQVNRAFPSPVVQVSSGAVHAMALLRDGSVWTAGLYDYGR 1116
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LGR T + + G+VP + + G N++ + S G+++A+G N +
Sbjct: 1117 LGRSTST---------VPGTQWGQVP-GLSGVTQIAAGWNNSYALLSDGTVMAWGWNIWG 1166
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY-G 321
Q G+ NT ++P + L KK L +G+ + L + + A+G + G
Sbjct: 1167 QCGDGT-------NTDRYSPVAVIGL-PKKVISLVAGRVNGLVVLEDNTAMAWGASNASG 1218
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+LG + S TP+ + +A GN A+ S+G ++ WG Q+G+G
Sbjct: 1219 QLGNGSTSN---SSTPVVISNISGVVKLAGGNDTHSALLSDGSVWAWGANANGQVGDGTT 1275
Query: 382 ---------------DDILN---------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
DI S+G I +G + YG++G + ++ + P P+
Sbjct: 1276 VTRLTPVKLSGVTGVKDIARGGDAGYAQLSDGSISGWGSNAYGQVGDGSTTDRWS-PVPV 1334
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
L + + +A G +A+ S+G WG + QLGN P+ ++G LN
Sbjct: 1335 SGLSN--VVQLAGGYYNGYALQSDGSAKAWGRNDAGQLGNNSSTQSASPVTVQG--LNGK 1390
Query: 478 TVLQVASGGQHSVIL 492
V +A+G + L
Sbjct: 1391 PVTSLATGARMEAPL 1405
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 151/374 (40%), Gaps = 75/374 (20%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP--QTVNLP--KKAVQIS 126
VV+V G +H + L DG V+T G D G LGR + +P Q +P QI+
Sbjct: 1087 VVQVSSGAVHAMALLRDGSVWTAGLYDYGRLGRS----TSTVPGTQWGQVPGLSGVTQIA 1142
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK-----IASGA 181
AG ++S ALL DGTV AWG G G+G +V G+ K +A
Sbjct: 1143 AGWNNSYALLSDGTVMAWG-----WNIWGQCGDGTNTDRYSPVAVIGLPKKVISLVAGRV 1197
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV--F 239
+ V+L + GQLG + ++S P+ +I V
Sbjct: 1198 NGLVVLEDNTAMAWGASNASGQLGNGSTSNSS--------------TPVVISNISGVVKL 1243
Query: 240 TGVYNTFIS--SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +T + S GS+ A+G N Q+G+ + + TP + ++ K +A
Sbjct: 1244 AGGNDTHSALLSDGSVWAWGANANGQVGDGTTVTR-------LTPVKLSGVTGVK--DIA 1294
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G A S+G I +G + YG++G + ++ + P P+ L + + +A G +
Sbjct: 1295 RGGDAGYAQLSDGSISGWGSNAYGQVGDGSTTDRWS-PVPVSGLSN--VVQLAGGYYNGY 1351
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
A+ S+G WG + QLGN N S P +
Sbjct: 1352 ALQSDGSAKAWGRNDAGQLGN---------------------------NSSTQSASPVTV 1384
Query: 418 PSLQDKTITSIACG 431
L K +TS+A G
Sbjct: 1385 QGLNGKPVTSLATG 1398
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 37/254 (14%)
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+TF+ ++LA G + LG + SG+T P + ++SG H+
Sbjct: 1044 DTFLVLGANMLASGFDGQGHLG-----IDNSGSTPLM-PVQVNRAFPSPVVQVSSGAVHA 1097
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
+AL +G ++ G +DYGRLG + P T+ +P L +T IA G S+A+ S+G
Sbjct: 1098 MALLRDGSVWTAGLYDYGRLGRSTSTVPGTQWGQVPGLSG--VTQIAAGWNNSYALLSDG 1155
Query: 364 VLYGWGMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHD 398
+ WG Q G+G D ++ + A+G +
Sbjct: 1156 TVMAWGWNIWGQCGDGTNTDRYSPVAVIGLPKKVISLVAGRVNGLVVLEDNTAMAWGASN 1215
Query: 399 Y-GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
G+LG + S TP+ + +A GN A+ S+G ++ WG Q+G+
Sbjct: 1216 ASGQLGNGSTSN---SSTPVVISNISGVVKLAGGNDTHSALLSDGSVWAWGANANGQVGD 1272
Query: 458 GKEDDILEPMKIEG 471
G L P+K+ G
Sbjct: 1273 GTTVTRLTPVKLSG 1286
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 29/310 (9%)
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGT 140
L DG V+ G N G +G +G + + +P + QI+AG+ +ALL DGT
Sbjct: 633 VLLRDGSVWAIGGNSHGQIG---DGVANYHTSWTQIPGVENVKQITAGNQTVLALLSDGT 689
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA-DHFVMLTSRGNLLTAGCP 199
V WG +G TP+ + +S + +I+S + + F +L +
Sbjct: 690 VIGWGDNYFGQIGTNTAAQGRAYTPVAIPGLSNVAQISSSSQNSFFLLKDK--------- 740
Query: 200 EQGQLGRITQRSASRNARRGMSFLEP-GEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
+ + EP P++ + DV + S G++ ++G
Sbjct: 741 ------TVWALGRGGAGLGTGNANEPDASTPVQVSGLTDVIQVAGTYALKSDGTVWSWGG 794
Query: 259 NNYSQLGEADSEV-----QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
N LG+ + V Q + TP + LS K T ++S +LAL S+G +Y
Sbjct: 795 NYSGALGQGTNPVPPRWSQGVPDYSSATPAKVVGLSGKTVTSISSYGGGALALTSDGAVY 854
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
A+G G +G S + T + L +T I+ +A+ S+G L WG +
Sbjct: 855 AWGDGQSGTIG-DGGSVSRSSATAVSGLTSG-VTLISSSGLSGYALKSDGTLVAWGDNSC 912
Query: 374 YQLGNGKEDD 383
QLG+G +
Sbjct: 913 GQLGDGTTTN 922
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 134/327 (40%), Gaps = 44/327 (13%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG----------REAEGDSEF--IPQTVNL 118
VV+ G + V L DG V++ G ND G LG + G + + +P NL
Sbjct: 1539 VVQAYSGFIFGVALLADGSVWSVGRNDYGQLGDPSVPVYDGSNGSAGRATWGRVP---NL 1595
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA 178
P VQI+ G + AL DGTVYAWG +++G +G Q +PLK+ +SG+ ++
Sbjct: 1596 PANVVQITGGRATVYALTADGTVYAWG--WNANGQIGNGTTTDQSSPLKVPGLSGVKRLG 1653
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+ G++ G + G L G TQR L P V D
Sbjct: 1654 GAYRSCFAIMGDGSVKAWGKNDGGSLGDGTTTQR------------LSPVSVSAWGTVSD 1701
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ + G++ A + LG D S P + L++ + +
Sbjct: 1702 IGGDHQQTAALRTDGTVWACSAVS-GTLGNGDGATSAS-------PVQVAGLANVQALAV 1753
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
G H L ++G + +G +D G++G S V PT + L + IA
Sbjct: 1754 GFGFFH--VLQADGTVAGWGANDVGQIG-NGGSSTVLSPTAVSGLGG--VARIAARWGGG 1808
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+A G ++GWG + QLG+G +
Sbjct: 1809 YATLGNGQVWGWGKNDSGQLGDGTTTN 1835
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 48/339 (14%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
+ P SV+ ++ AD + ++ S NL+ AG G G T +A+ +
Sbjct: 1476 VWTRPGASLSVTAANGSSTAADVYTVIGS--NLMHAGYGLWGAGGDGTNNNATTATQTSR 1533
Query: 221 SFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN--- 276
+F P + ++G ++ + + GS+ + G N+Y QLG+ V N
Sbjct: 1534 AFSSP---------VVQAYSGFIFGVALLADGSVWSVGRNDYGQLGDPSVPVYDGSNGSA 1584
Query: 277 ---TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
T P+L + G+ AL ++G +YA+G + G++G ++ +
Sbjct: 1585 GRATWGRVPNL-----PANVVQITGGRATVYALTADGTVYAWGWNANGQIGNGTTTDQ-S 1638
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P +P L A +C FAI +G + WG +G LG+G L S + A
Sbjct: 1639 SPLKVPGLSGVKRLGGAYRSC--FAIMGDGSVKAWGKNDGGSLGDGTTTQRL-SPVSVSA 1695
Query: 394 FG---------------RHDYGRLGLKNVS------EPVTEPTPIPSLQDKTITSIACGN 432
+G R D VS + T +P+ + ++A G
Sbjct: 1696 WGTVSDIGGDHQQTAALRTDGTVWACSAVSGTLGNGDGATSASPVQVAGLANVQALAVGF 1755
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ ++G + GWG + Q+GNG +L P + G
Sbjct: 1756 GFFHVLQADGTVAGWGANDVGQIGNGGSSTVLSPTAVSG 1794
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 39/320 (12%)
Query: 71 VVEVVVGGMH-TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGD 129
VV+V GG + T+ +G V+ G N +G L D + PQ + V I+AG
Sbjct: 148 VVQVAQGGYNFTLFRLSNGDVWGVGRNGDGQLADGTTTDRYWPPQQIAGLSNVVDIAAGY 207
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK----TPLKLESVSGIVKIASGADHFV 185
S A++ DGTV +WGS +S ++G QK + + + VS ++A G+ +
Sbjct: 208 STGYAVMPDGTVRSWGSNYES--ALGDGTTYAQKSFSTSVVTVSGVSNAARVAGGSWFGL 265
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF----TG 241
L ++ G GQLG T ++ P V + + DV T
Sbjct: 266 ALLKDATVMGWGRNGAGQLGDTTNQN------------RPTAVSV--SGVSDVIQVAATS 311
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
V + + GSI+A+G N Q G+ ++ SGN +TP + +S+ AS
Sbjct: 312 VAGYALRTDGSIMAWGGNWKGQQGDGSTQ---SGN--HYTPTPVVGVSNAASIAAAS--Q 364
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
AL ++ + A+G + G LG S + L D + +I G +A+ +
Sbjct: 365 TGYALLADKTVVAWGDGENGELG-NGASAASPSVVAVQGLSD--VANIGSG----YALKT 417
Query: 362 EGVLYGWGMGNGYQLGNGKE 381
+G ++ WG + QLGNG
Sbjct: 418 DGTVWAWGPNDKGQLGNGSS 437
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 45/316 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV---------MERKTFALVEDLDNVVEVVVGGMHTV-CLTE 86
G V + G+ D GQLG P V R T+ V +L V + GG TV LT
Sbjct: 1556 GSVWSVGRNDYGQLG-DPSVPVYDGSNGSAGRATWGRVPNLPANVVQITGGRATVYALTA 1614
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
DG VY WG N G +G D + P V ++ A++ DG+V AWG
Sbjct: 1615 DGTVYAWGWNANGQIGNGTTTD-QSSPLKVPGLSGVKRLGGAYRSCFAIMGDGSVKAWG- 1672
Query: 147 FRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE-QGQL 204
++ GS+G G Q+ +P+ + + + I G DH R + C G L
Sbjct: 1673 -KNDGGSLG-DGTTTQRLSPVSVSAWGTVSDI--GGDHQQTAALRTDGTVWACSAVSGTL 1728
Query: 205 GR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
G SAS G++ ++ V H+ + + G++ +G N+ Q
Sbjct: 1729 GNGDGATSASPVQVAGLANVQALAVGFGFFHV-----------LQADGTVAGWGANDVGQ 1777
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+G G++ +P + L + G + +L G+++ +G++D G+
Sbjct: 1778 IGNG-------GSSTVLSPTAVSGLGGVARIAARWGGGYATLG---NGQVWGWGKNDSGQ 1827
Query: 323 LGLKNVSEPVTEPTPI 338
LG + PTP+
Sbjct: 1828 LGDGTTTN---RPTPV 1840
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 133/352 (37%), Gaps = 53/352 (15%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V+ G G+ G+LG G A V+ L +V + G L DG V+ WG ND+
Sbjct: 375 VVAWGDGENGELGNGASAASPSVVA-VQGLSDVANIGSG----YALKTDGTVWAWGPNDK 429
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
G LG + + +P V+LP V A G D + G
Sbjct: 430 GQLGNGSSASNSNVPVQVSLPAGI-----------------PVTAIGGSADGGARFAISG 472
Query: 159 E-GIQKTPLKLESVSGIVKIASGADHF---------VMLTSRGNLLTAGCPEQGQLGRIT 208
E + ++ E +G + V LTS GN + Q +
Sbjct: 473 ELTLNVDVVETEVAAGTAGTVTATVSSGSSGVGGAEVSLTSSGNAVLGASLGQTNAAGVF 532
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
Q S + + + PG R D + + + + L FG + S+LG+
Sbjct: 533 QTSVTPD-----RWTVPGAQLQVRASTDAASS--VDGYTVLGANALGFGRDTGSELGDNG 585
Query: 269 SEVQKSGN-----------TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ +SG TC F +++ +S + S L +G ++A G
Sbjct: 586 AAGPQSGTSSISRVTPSQLTCIFPSPIVQMVSTGYSADSYYSYNASFVLLRDGSVWAIGG 645
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
+ +G++G V+ T T IP +++ + I GN A+ S+G + GWG
Sbjct: 646 NSHGQIG-DGVANYHTSWTQIPGVEN--VKQITAGNQTVLALLSDGTVIGWG 694
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 135/325 (41%), Gaps = 46/325 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLK 231
+V+ SG V L + G++ + G + GQLG + S + ++ G VP
Sbjct: 1539 VVQAYSGFIFGVALLADGSVWSVGRNDYGQLGDPSVPVYDGSNGSAGRATW---GRVPNL 1595
Query: 232 RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
++ + G + +++ G++ A+G N Q+G + Q S P + LS
Sbjct: 1596 PANVVQITGGRATVYALTADGTVYAWGWNANGQIGNGTTTDQSS-------PLKVPGLSG 1648
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K L A+ +G + A+G++D G LG ++ ++ P+ T++ I
Sbjct: 1649 VK--RLGGAYRSCFAIMGDGSVKAWGKNDGGSLGDGTTTQRLS---PVSVSAWGTVSDIG 1703
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILN 386
+ + A+ ++G ++ +G LGNG +L
Sbjct: 1704 GDHQQTAALRTDGTVWACSAVSG-TLGNGDGATSASPVQVAGLANVQALAVGFGFFHVLQ 1762
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
++G + +G +D G++G S V PT + L + IA +A G ++G
Sbjct: 1763 ADGTVAGWGANDVGQIG-NGGSSTVLSPTAVSGLGG--VARIAARWGGGYATLGNGQVWG 1819
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEG 471
WG + QLG+G + P+++ G
Sbjct: 1820 WGKNDSGQLGDGTTTNRPTPVQMGG 1844
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 142/360 (39%), Gaps = 62/360 (17%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESV--SGIV 175
AV S+ S S +L V WGS G G+ G G TP ++ V S +V
Sbjct: 96 AAVSGSSNASQSFGVL-GANVLGWGS-----GLFGMAGLGTTDNAPTPRQVMQVFPSPVV 149
Query: 176 KIASGADHFVMLT-SRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKR 232
++A G +F + S G++ G GQL G T R + P ++
Sbjct: 150 QVAQGGYNFTLFRLSNGDVWGVGRNGDGQLADGTTTDR-----------YWPPQQI-AGL 197
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
++ D+ G + + G++ ++G N S LG+ + QKS +T T + +S+
Sbjct: 198 SNVVDIAAGYSTGYAVMPDGTVRSWGSNYESALGDGTTYAQKSFSTSVVT---VSGVSNA 254
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A G LAL + + +GR+ G+LG PT + + +A
Sbjct: 255 A--RVAGGSWFGLALLKDATVMGWGRNGAGQLGDTTNQN---RPTAVSVSGVSDVIQVAA 309
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
+ +A+ ++G + WG GN G++ D G Y
Sbjct: 310 TSVAGYALRTDGSIMAWG-GNW----KGQQGDGSTQSGNHY------------------- 345
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
TP P + SIA + +A+ ++ + WG G +LGNG + ++G
Sbjct: 346 ---TPTPVVGVSNAASIAAASQTGYALLADKTVVAWGDGENGELGNGASAASPSVVAVQG 402
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 139/351 (39%), Gaps = 61/351 (17%)
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
S LL DG+V+A G +SHG +G + ++ V + +I +G + L S G
Sbjct: 631 SFVLLRDGSVWAIGG--NSHGQIGDGVANYHTSWTQIPGVENVKQITAGNQTVLALLSDG 688
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
++ G GQ+G + A +G ++ P +P ++ + + N+F K
Sbjct: 689 TVIGWGDNYFGQIG-------TNTAAQGRAY-TPVAIP-GLSNVAQISSSSQNSFFLLKD 739
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ + LG ++ + TP + L+D + +G + AL S+G
Sbjct: 740 KTVWALGRGGAGLGTGNANEPDA-----STPVQVSGLTD---VIQVAGTY---ALKSDGT 788
Query: 312 IYAFGRHDYGRLGLKNVSEP-----------VTEPTPIPSLQDKTITSIACGNCVSFAID 360
++++G + G LG P P + L KT+TSI+
Sbjct: 789 VWSWGGNYSGALGQGTNPVPPRWSQGVPDYSSATPAKVVGLSGKTVTSISS--------- 839
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
YG G L S+G +YA+G G +G S + T + L
Sbjct: 840 -----YGGGA------------LALTSDGAVYAWGDGQSGTIG-DGGSVSRSSATAVSGL 881
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+T I+ +A+ S+G L WG + QLG+G + P+ + G
Sbjct: 882 TSG-VTLISSSGLSGYALKSDGTLVAWGDNSCGQLGDGTTTNRATPVSVTG 931
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 15/151 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMH-------------TVC 83
G V + G +G LG G + + + V D + V G+ +
Sbjct: 787 GTVWSWGGNYSGALGQGTNPVPPRWSQGVPDYSSATPAKVVGLSGKTVTSISSYGGGALA 846
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
LT DG VY WG G +G L IS+ AL DGT+ A
Sbjct: 847 LTSDGAVYAWGDGQSGTIGDGGSVSRSSATAVSGLTSGVTLISSSGLSGYALKSDGTLVA 906
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
WG +S G +G + TP+ + + G+
Sbjct: 907 WG--DNSCGQLGDGTTTNRATPVSVTGLDGL 935
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4018 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4075
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4076 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4127
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4128 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4180
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4181 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4231
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4232 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4272
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4273 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4327
Query: 497 P 497
P
Sbjct: 4328 P 4328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 484 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 542
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 543 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 602
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 603 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 661
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 662 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 719
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 720 VAAGSTHCLALTE 732
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2966 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3023
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3024 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3081
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3082 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3132
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3133 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3185
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3186 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3238
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3239 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3277
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3278 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3328
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3076
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3077 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3131
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3132 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3191
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3192 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3236
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3237 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3288
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3289 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 460 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 509
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 510 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 551
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 552 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 604
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 605 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 663
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 723
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 724 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIACGPAQSFA 781
Query: 438 IDS 440
S
Sbjct: 782 WSS 784
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3957 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4015
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4016 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4075
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4076 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4130
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4131 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4183
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4184 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4236
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4237 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4291
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4292 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2958 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3012
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3013 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3072
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3073 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3130
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3131 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3177
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3178 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3230
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3231 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3289
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3290 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3322
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3323 GSSHSVA 3329
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4065 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4118
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4119 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4175
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4176 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4233
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4234 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4283
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4284 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4335
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4336 AQVPMEYNHL 4345
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 500 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 556
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 557 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 614
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 615 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 663
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 716
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 717 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIAC 774
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 775 GPAQSFAWSS 784
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2964 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3016
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3061
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3062 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3111
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3112 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3169
Query: 490 VILA 493
LA
Sbjct: 3170 QTLA 3173
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 627 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 680
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 681 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740
Query: 146 S 146
S
Sbjct: 741 S 741
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 573 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 631
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 632 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 688
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 689 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 747
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 748 FDTLRVTKP-------------EPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 793
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 520 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 577
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 578 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 636
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 637 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694
Query: 204 LGRITQ 209
LG T+
Sbjct: 695 LGHGTE 700
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4220 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4278
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4279 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4322
>gi|402571800|ref|YP_006621143.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus meridiei DSM 13257]
gi|402252997|gb|AFQ43272.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus meridiei DSM 13257]
Length = 740
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 178/406 (43%), Gaps = 69/406 (16%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALG-REAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
+ G +H++ L DG V+ WG N EG LG ++ + P VN + ++AG +HS
Sbjct: 52 ISAGFVHSLALDSDGSVWAWGDNSEGQLGNNRSDLHNSATPVKVNDLTNVIAVAAGGAHS 111
Query: 133 VALLEDGTVYAWGSFRDSHGSMG------------LKGEGIQK-TPLKLESVSGIVKIAS 179
+AL +DGTV+ WG+ G G + E ++ TPL+++ ++ I+ IA+
Sbjct: 112 LALKKDGTVWGWGNNEYGQGGYGKIELIAGGPSYYMPDEFLRSYTPLQVQGLTDIIAIAA 171
Query: 180 GADHFVMLTSRGNLLTAGC-PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G D+ + L S G + G P QL N G S + P ++ ID
Sbjct: 172 GMDYSLALKSDGTVWAWGSEPYGNQL---------TNTSGGFSNI-PAQI-----QIDSY 216
Query: 239 FTGVYNTFISSKGSILAFGLN------NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ + S GS A L + L D V S H + LS
Sbjct: 217 GNKLTDITKISAGSAFALALKKDGTVWTWGGLLVDDQGVHNS------VAHAQQVLSLSD 270
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+++G HSLAL S+G ++ +G +D +LG +N +E + P I L + I G
Sbjct: 271 VVSISAGYSHSLALKSDGTVWGWGSNDLFQLGDRNSAENWSTPLQISGLNH--VHGIVAG 328
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+S A+ ++G ++ WG QLGN + + +EP+
Sbjct: 329 TYLSMALKTDGTVWSWGANIWGQLGNAADFE------------------------TEPLV 364
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ P+ + K +T+IA G + A + G ++ WG+ + Q GNG
Sbjct: 365 K-NPVQVKELKNVTAIASGFGFNIARQNGGSIWAWGVNSDGQHGNG 409
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 190/435 (43%), Gaps = 68/435 (15%)
Query: 37 GVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G GQLG D+ T V DL NV+ V GG H++ L +DG V+ WG
Sbjct: 66 GSVWAWGDNSEGQLGNNRSDLHNSATPVKVNDLTNVIAVAAGGAHSLALKKDGTVWGWGN 125
Query: 96 ND--EGALGR---EAEGDSEFIPQ---------TVNLPKKAVQISAGDSHSVALLEDGTV 141
N+ +G G+ A G S ++P V + I+AG +S+AL DGTV
Sbjct: 126 NEYGQGGYGKIELIAGGPSYYMPDEFLRSYTPLQVQGLTDIIAIAAGMDYSLALKSDGTV 185
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLE------SVSGIVKIASGADHFVMLTSRGNLLT 195
+AWGS + G G P +++ ++ I KI++G+ + L G + T
Sbjct: 186 WAWGSEPYGNQLTNTSG-GFSNIPAQIQIDSYGNKLTDITKISAGSAFALALKKDGTVWT 244
Query: 196 AG---CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS 252
G +QG + A++ +S + + H + + S G+
Sbjct: 245 WGGLLVDDQGVHNSVAH------AQQVLSLSDVVSISAGYSH---------SLALKSDGT 289
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G N+ QLG+ +S S TP I L+ + +G + S+AL ++G +
Sbjct: 290 VWGWGSNDLFQLGDRNSAENWS------TPLQISGLN--HVHGIVAGTYLSMALKTDGTV 341
Query: 313 YAFGRHDYGRLGLKNVSEPVTEP---TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
+++G + +G+LG N ++ TEP P+ + K +T+IA G + A + G ++ WG
Sbjct: 342 WSWGANIWGQLG--NAADFETEPLVKNPVQVKELKNVTAIASGFGFNIARQNGGSIWAWG 399
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ + Q GNG S G Y G G S PV + S + T +A
Sbjct: 400 VNSDGQHGNG-------SYGGSYEIGDFTGGS------SSPVKSSAQVGSFDNTAFTRLA 446
Query: 430 CGNCV--SFAIDSEG 442
+ + S I EG
Sbjct: 447 GNDAMDTSVKISQEG 461
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 64/352 (18%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
I++G H + L S G++ G +GQLG N R S L P+K +
Sbjct: 52 ISAGFVHSLALDSDGSVWAWGDNSEGQLG---------NNR---SDLHNSATPVKVNDLT 99
Query: 237 DVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF--------FTPHL 284
+V G ++ + G++ +G N Y Q G E+ G + + +TP
Sbjct: 100 NVIAVAAGGAHSLALKKDGTVWGWGNNEYGQGGYGKIELIAGGPSYYMPDEFLRSYTPLQ 159
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL------GLKNVSEPVTEPTPI 338
++ L+D +A+G +SLAL S+G ++A+G YG G N+ + +
Sbjct: 160 VQGLTD--IIAIAAGMDYSLALKSDGTVWAWGSEPYGNQLTNTSGGFSNIPAQIQIDSYG 217
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWG---------------------MGNGYQLG 377
L D IT I+ G+ + A+ +G ++ WG + + +
Sbjct: 218 NKLTD--ITKISAGSAFALALKKDGTVWTWGGLLVDDQGVHNSVAHAQQVLSLSDVVSIS 275
Query: 378 NGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G + L S+G ++ +G +D +LG +N +E + P I L + I G +S
Sbjct: 276 AGYSHSLALKSDGTVWGWGSNDLFQLGDRNSAENWSTPLQISGLNH--VHGIVAGTYLSM 333
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPM---KIEGKQLNNYTVLQVASG 485
A+ ++G ++ WG QLGN + + EP+ ++ K+L N T +ASG
Sbjct: 334 ALKTDGTVWSWGANIWGQLGNAADFET-EPLVKNPVQVKELKNVTA--IASG 382
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 45/193 (23%)
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-----------DILN------- 386
++++I+ G S A+DS+G ++ WG + QLGN + D D+ N
Sbjct: 48 SLSTISAGFVHSLALDSDGSVWAWGDNSEGQLGNNRSDLHNSATPVKVNDLTNVIAVAAG 107
Query: 387 --------SEGKIYAFGRHDYGRLGLKNV------------SEPVTEPTPIPSLQDKTIT 426
+G ++ +G ++YG+ G + E + TP+ I
Sbjct: 108 GAHSLALKKDGTVWGWGNNEYGQGGYGKIELIAGGPSYYMPDEFLRSYTPLQVQGLTDII 167
Query: 427 SIACGNCVSFAIDSEGVLYGWG---MGNGYQLGNGKEDDILEPMKIE--GKQLNNYTVLQ 481
+IA G S A+ S+G ++ WG GN +G +I ++I+ G +L + T +
Sbjct: 168 AIAAGMDYSLALKSDGTVWAWGSEPYGNQLTNTSGGFSNIPAQIQIDSYGNKLTDIT--K 225
Query: 482 VASGGQHSVILAK 494
+++G ++ L K
Sbjct: 226 ISAGSAFALALKK 238
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 2171 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2229
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 2230 -YGAGGRLGIGGTESV-STPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAED 2287
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ I+ G + ++G Y
Sbjct: 2288 GKLGHGNRSPCDRP--RVVESLRGIEV------VDIAAGGAHSACITVAGDLYSWGKGRY 2339
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 2340 GRLGHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2392
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 2393 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 2443
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 2444 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 2484
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 2485 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHTLAWSTSK 2539
Query: 497 P 497
P
Sbjct: 2540 P 2540
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G+++++G D GRLG + + P+
Sbjct: 183 NSDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD-TVPLE 241
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I +L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 242 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 301
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 302 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 360
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D I + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 361 DLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVVD 418
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 419 VAAGSTHCLALTE 431
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 57/349 (16%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ G ++G + IVK+A+ +D
Sbjct: 160 QIACAEKRFLILSRNGRVYVQAYNSDTLGPQLVQGLASRN----------IVKVAAHSDG 209
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG + + +S L + KH+ + G
Sbjct: 210 HHYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQA---GKHVVHIACG 264
Query: 242 -VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--S 298
Y+ I+++G + +G NY +LG SE Q P L+ L K ++ S
Sbjct: 265 STYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDVSCGS 317
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +LA+ G+++++G DYG+LG + S+ P I LQD I + CG+ S A
Sbjct: 318 GDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIY 392
+ +G +Y WG G+ +LG+G E+ + L + +++
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 436
Query: 393 AFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
++G +D + +++P +P+ +P L K I IACG SFA S
Sbjct: 437 SWGSNDQCQHFDTLRITKP--QPSALPGLDTKHIVGIACGPAQSFAWSS 483
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 55/424 (12%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 1150 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 1207
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 1208 EATNGRLGLGIS-SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 1267 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 1317
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 1318 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1370
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G+ G
Sbjct: 1371 DFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGD---FGE 1426
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-----PSLQDKTITSIACGNC 433
+ D + G + R+ ++N + P P P I I +
Sbjct: 1427 LRPDSHIVQSGNV-------SDRMRVRNKGACLI-PLPFFGLVSPREMGWEIVGIERNSG 1478
Query: 434 VSFAIDSEG-------VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
+S +G +Y WG + Q GNG +P ++G L + +VA G
Sbjct: 1479 ISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 1536
Query: 487 QHSV 490
HSV
Sbjct: 1537 SHSV 1540
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 173/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 2169 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 2227
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 2228 TGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAED 2287
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V IA+G H +T G+L + G +G+ GR+
Sbjct: 2288 --GKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWG---KGRYGRL 2342
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ + D+ G ++ ++ ++G +Y +
Sbjct: 2343 GHGDSEDQ-------LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2395
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 2396 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 2448
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 2449 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 2503
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I +ACG+ + A
Sbjct: 2504 -----------------------TTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 47/311 (15%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLD- 69
Q VFV AV + + G V + G+ + G+LG G P R +VE L
Sbjct: 2254 QHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR----VVESLRG 2309
Query: 70 -NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQ 124
VV++ GG H+ C+T G +Y+WG +G GR GDSE P+ V + + +
Sbjct: 2310 IEVVDIAAGGAHSACITVAGDLYSWG---KGRYGRLGHGDSEDQLKPKLVEALQGYRVID 2366
Query: 125 IS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASG 180
I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+ G
Sbjct: 2367 IACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 2424
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVF 239
+ V LT G + T G + +LG + + RR P +V L+ K + +
Sbjct: 2425 SQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIAIA 2474
Query: 240 TG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLA 297
TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK +A
Sbjct: 2475 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKINRVA 2526
Query: 298 SGQHHSLALNS 308
G H+LA ++
Sbjct: 2527 CGSAHTLAWST 2537
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 39/308 (12%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V+V G H + L G+V++WGC D G LG GD+ + P+ ++
Sbjct: 199 NIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLG---HGDTVPLEEPKMISALSGKQAG 255
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 256 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 313
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E L+ I
Sbjct: 314 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIEK----LQDLDI 364
Query: 236 DDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V G ++ ++ G + ++G + +LG E + P L++ L KK
Sbjct: 365 VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKKVV 417
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A+G H LAL + +++++G +D + +++P +P+ +P L K I IACG
Sbjct: 418 DVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKP--QPSALPGLDTKHIVGIACGP 475
Query: 354 CVSFAIDS 361
SFA S
Sbjct: 476 AQSFAWSS 483
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 52/351 (14%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCL 84
TL T G + G G G+LG+G T L+E + +V V V GG H + L
Sbjct: 2215 TLFAVTADGKLYATGYGAGGRLGIG-GTESVSTPTLLESIQHVFVKKVAVNSGGKHCLAL 2273
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVY 142
+ +G+VY+WG ++G LG + P+ V + + V I+AG +HS + G +Y
Sbjct: 2274 SSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVVESLRGIEVVDIAAGGAHSACITVAGDLY 2332
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLLTAGC 198
+WG R +G +G Q P +E++ G ++ IA SG + LT + + G
Sbjct: 2333 SWGKGR--YGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 2390
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----------YNTFIS 248
+ G+LG RG S + +VP+K D TG+ ++ ++
Sbjct: 2391 GDYGKLG------------RGGS--DGCKVPMKI----DSLTGLGVVKVECGSQFSVALT 2432
Query: 249 SKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
G++ +G +Y +LG +D V++ P ++ L KK +A+G H +
Sbjct: 2433 KSGAVYTWGKGDYHRLGHGSDDHVRR--------PRQVQGLQGKKVIAIATGSLHCVCCT 2484
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G++Y +G +D G+LG + + P + +LQ K I +ACG+ + A
Sbjct: 2485 EDGEVYTWGDNDEGQLG-DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 1148 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 1200
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1260
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + +P I +L+ K I
Sbjct: 1261 WGEGD---------------DGKLGHFSRMN------------CDKPRLIEALKTKRIRD 1293
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 1294 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 1351
Query: 488 HSVILA 493
+ LA
Sbjct: 1352 DAQTLA 1357
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 183/431 (42%), Gaps = 49/431 (11%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 1142 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 1196
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + +P+ + N K V + +G H++AL DG
Sbjct: 1197 VTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDG 1256
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H +TS G L T G
Sbjct: 1257 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 1314
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSI 253
E G+LG + L+P V + H + V G + ++ +G +
Sbjct: 1315 LGEYGRLGHGDNTTQ----------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 1364
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G ++ +LG SE C P I+ L+ + + G SLAL G ++
Sbjct: 1365 FSWGDGDFGKLGRGGSE------GCN-VPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1417
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI--ACGNCVSFAIDSEGVLYGWGM- 370
+GR D+G L P + ++ D+ AC + F GW +
Sbjct: 1418 TWGRGDFGEL------RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIV 1471
Query: 371 ----GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
+G G++ + + ++YA+G +D+G+ G + +PT + L+ + IT
Sbjct: 1472 GIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKIT 1530
Query: 427 SIACGNCVSFA 437
+ACG+ S A
Sbjct: 1531 RVACGSSHSVA 1541
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD +V+V G ++ LT+
Sbjct: 326 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-IVKVRCGSQFSIALTK 379
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK V ++AG +H +AL ED V++WG
Sbjct: 380 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
S L+ Q + L IV IA G
Sbjct: 440 SNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACG 474
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTEDGKV 90
G V + G GD G+LG G D + + ++ L +VV + G ++ +T +G++
Sbjct: 219 GEVFSWGCGDGGRLGHG-DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGEL 277
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWGS 146
YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++WG
Sbjct: 278 YTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 336
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+G +G G KTP +E + IVK+ G+ + LT G + + G + +L
Sbjct: 337 --GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 394
Query: 205 GRITQ 209
G T+
Sbjct: 395 GHGTE 399
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFA-LVEDLD--NVVEVVVGG--MHTVCLTEDG 88
T G + T G+G+ G+LG G E +T LV L V++V G T+ +TE+G
Sbjct: 272 TAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENG 329
Query: 89 KVYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 330 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DIVKVRCGSQFSIALTKDGQVYSWG 387
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G E + P LE + G +V +A+G+ H + LT + + G +Q Q
Sbjct: 388 --KGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445
Query: 204 ---LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
RIT+ +P +P L KHI + G +F S S + GL
Sbjct: 446 HFDTLRITKP-------------QPSALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 492
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3300 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3357
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3358 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 3409
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 3410 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3462
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3463 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3513
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 3514 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 3554
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 3555 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 3609
Query: 497 P 497
P
Sbjct: 3610 P 3610
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2249 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2306
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2307 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 2366 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2416
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 2417 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2469
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2470 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2521
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2522 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2561
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 2562 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 2611
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2359
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 2360 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 2414
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2415 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2474
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 2475 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2519
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2520 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2571
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2572 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3239 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3297
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3298 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3357
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3358 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 3412
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 3413 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 3465
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3466 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3518
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 3519 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 3573
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 3574 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3604
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2241 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2295
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2296 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 2355
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 2356 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2413
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 2414 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2460
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 2461 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 2513
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 2514 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 2572
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 2573 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 2605
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 2606 GSSHSVA 2612
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 3324 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 3381
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 3382 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 3434
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 3435 VDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 3492
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 3493 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 3542
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 3543 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 3594
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 3595 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 3627
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2247 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2299
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 2344
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 2345 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 2394
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 2395 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 2452
Query: 490 VILA 493
LA
Sbjct: 2453 QTLA 2456
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 191/422 (45%), Gaps = 62/422 (14%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP---KKAVQISAGD 129
+ G +H++ L ++++WG N +G LG D T P V IS G
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTGS 1491
Query: 130 --SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP---LKLESV--SGIVKIASGAD 182
S S A+ + G ++AWG + G++G G GI + + L S+ S + +A+G
Sbjct: 1492 GASRSQAIDDQGRLWAWG--YNFAGALG-DGTGIDRNRPVLVDLASLGSSKVTAVAAGRY 1548
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV---PLKRKHIDDVF 239
H ++L + L G GQLG T R +++ P +V PL + V+
Sbjct: 1549 HNLVLDDQSRLWAWGHNGDGQLGDGT--------RTNVAYPLPIQVDLEPLAGSTVTGVW 1600
Query: 240 TGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +++ I G + +G N Y +LG+ + Q P L+ +K +++
Sbjct: 1601 AGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLP-----LNGRKVMAVSA 1655
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKTITSIACGNCV 355
G+HH++AL+ +G ++A+G +D GRLG + ++ PV + SL + +I+ G
Sbjct: 1656 GEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQ--VDLTSLDGHKVVAISAGGWN 1713
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV-TEP 414
+ A+D G L+ WG LG+G N PV +
Sbjct: 1714 TVALDELGRLWAWGPNESGLLGDGTT-----------------------INQHRPVQVDL 1750
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
TP L + + +++ G+ F +D G L+ WG + QLG+G + L+P++++ +
Sbjct: 1751 TP---LNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTRRLKPVRVDMSAM 1807
Query: 475 NN 476
NN
Sbjct: 1808 NN 1809
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 153/327 (46%), Gaps = 51/327 (15%)
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
++A+G+ H ++L ++ + + G G LG T R +R ++ PL +
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLT-------PLGGSTV 1484
Query: 236 DDVFTGV---YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI--KSLSD 290
+ TG + I +G + A+G N LG+ + + ++ P L+ SL
Sbjct: 1485 VSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDG-TGIDRN------RPVLVDLASLGS 1537
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTIT 347
K T +A+G++H+L L+ + +++A+G + G+LG NV+ P+ + L T+T
Sbjct: 1538 SKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVT 1597
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+ G+ S IL+ G+++ +G++ YG LG
Sbjct: 1598 GVWAGDFHSI--------------------------ILDDLGRLWVWGKNKYGELG-DGT 1630
Query: 408 SEPVTEPTPIP--SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ T P + L + + +++ G + A+D +G L+ WG+ + +LG+G D
Sbjct: 1631 TTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHR 1690
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVIL 492
P++++ L+ + V+ +++GG ++V L
Sbjct: 1691 PVQVDLTSLDGHKVVAISAGGWNTVAL 1717
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 24/242 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTW 93
+ G GQLG G + DL+ V V G H++ L + G+++ W
Sbjct: 1559 LWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVW 1618
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G N G LG + + P V+L +K + +SAG+ H+VAL E G ++AWG D
Sbjct: 1619 GKNKYGELG-DGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWG-LND 1676
Query: 150 SHGSMGLKGEGIQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
S G +G + P++++ S +V I++G + V L G L G E G LG
Sbjct: 1677 S-GRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGPNESGLLG 1735
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
T + R + ++ PL + + V G + F + +G + A+G N+Y QL
Sbjct: 1736 DGTTINQHRPVQVDLT-------PLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQL 1788
Query: 265 GE 266
G+
Sbjct: 1789 GD 1790
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL----DNVVEVVVGGMHTVCLTEDGKVYT 92
G + G+ G+LG G + + LV+ L V+ V G HTV L E G ++
Sbjct: 1613 GRLWVWGKNKYGELGDGTTTYQTRP-VLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWA 1671
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG ND G LG + D P V+L K V ISAG ++VAL E G ++AWG
Sbjct: 1672 WGLNDSGRLGDGSTTDRHR-PVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGP-- 1728
Query: 149 DSHGSMGLKGEGI---QKTPLK--LESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQ 201
GL G+G Q P++ L ++G +V +++G+ +F ++ RG L G
Sbjct: 1729 ---NESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSY 1785
Query: 202 GQLGRITQRSASRNARRGMSFL 223
GQLG T+ + R MS +
Sbjct: 1786 GQLGDGTKTRRLKPVRVDMSAM 1807
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3991 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4048
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4049 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4100
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4101 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4153
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4154 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4204
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4205 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4245
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4246 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4300
Query: 497 P 497
P
Sbjct: 4301 P 4301
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 456 NSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 514
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 515 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 574
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 575 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 633
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 634 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 691
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 692 VAAGSTHCLALTE 704
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2938 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2995
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2996 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3055 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3105
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3106 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3158
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3159 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3210
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3211 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3250
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3251 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3300
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3048
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3049 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3103
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3104 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3163
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3164 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3208
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3209 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3260
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3261 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + I+KIA+ +D
Sbjct: 433 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIIKIAAHSDG 482
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 483 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 524
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 525 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 577
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 578 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 636
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 637 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 696
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 697 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 754
Query: 439 DS 440
S
Sbjct: 755 SS 756
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3930 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3988
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3989 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4048
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4049 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4103
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4104 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4156
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4157 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4209
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4210 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4264
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4265 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2930 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2984
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2985 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3044
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3045 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3102
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3103 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3149
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3150 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3202
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3203 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3261
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3262 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3294
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3295 GSSHSVA 3301
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4038 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4091
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V ++ +GD+ ++ L +D TV++
Sbjct: 4092 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4148
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4149 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4206
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4207 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4256
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4257 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4308
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4309 AQVPMEYNHL 4318
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N++++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 472 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 528
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 529 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 586
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 587 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 635
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 636 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 688
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 689 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 746
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 747 GPAQSFAWSS 756
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2936 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2988
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3033
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3034 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3083
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3084 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3141
Query: 490 VILA 493
LA
Sbjct: 3142 QTLA 3145
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 599 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 652
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 653 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712
Query: 146 S 146
S
Sbjct: 713 S 713
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 545 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 603
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 604 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 660
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 661 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 719
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 720 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 765
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 492 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 549
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 550 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 608
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 609 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666
Query: 204 LGRITQ 209
LG T+
Sbjct: 667 LGHGTE 672
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4193 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4251
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4252 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4295
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 70/405 (17%)
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTS 189
+LL+ G ++ WG+ R HG +GL G + I P +++ S I +IA G ++ V++T
Sbjct: 26 SLLKKGDMFCWGNTR--HGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITH 83
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-IS 248
G + + G + GQLG R +R L K+ V G Y+T ++
Sbjct: 84 DGKIYSCGNNDYGQLGH------ERGRKRLQLILGLDAFVFKK-----VACGAYHTIAVN 132
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + ++G N+ QLG S N +P ++K+L +A G H+LAL +
Sbjct: 133 EWGQLFSWGSNSEGQLG------LNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTN 186
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G++Y++G + G+LGL +P I +L I IACG S AI G ++GW
Sbjct: 187 NGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 246
Query: 369 GMGNGYQLG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRL 402
G QLG G+E + L +G ++ G YG+L
Sbjct: 247 GKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 306
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKED 461
G + + + P + L T+T I+CG + A + S+G +Y WG+G QLGN
Sbjct: 307 GHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTR 365
Query: 462 DILEPMKIEG--------------KQLNN----YTVLQVASGGQH 488
I P + G KQ ++ Y V + +GG H
Sbjct: 366 SIPTPQVVHGPWVAPNGSSMMDLDKQFSSCTVGYVVKHIFTGGDH 410
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 171/370 (46%), Gaps = 55/370 (14%)
Query: 37 GVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + G G+LGLG +++ + + ++ G +TV +T DGK+Y+
Sbjct: 31 GDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSC 90
Query: 94 GCNDEGALGRE--------AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
G ND G LG E G F+ + +++ G H++A+ E G +++WG
Sbjct: 91 GNNDYGQLGHERGRKRLQLILGLDAFVFK---------KVACGAYHTIAVNEWGQLFSWG 141
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
S +S G +GL + + ++ G IV++A G H + LT+ G L + G +G
Sbjct: 142 S--NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEG 199
Query: 203 QLGR-ITQRSASR----NARRG--MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
QLG + RS + N G ++F+ G G ++ IS G+I
Sbjct: 200 QLGLGVDIRSEVKPKLINTLAGVPIAFIACG--------------GYHSIAISKSGAIFG 245
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N + QLG D++ + PH +++L + K A G+ S+ L +G ++
Sbjct: 246 WGKNTFGQLGLNDTQNRN-------LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTC 298
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGY 374
G YG+LG + + + P + L T+T I+CG + A + S+G +Y WG+G
Sbjct: 299 GAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAG 357
Query: 375 QLGNGKEDDI 384
QLGN I
Sbjct: 358 QLGNNSTRSI 367
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 153/338 (45%), Gaps = 40/338 (11%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFALVEDL 68
P Q F + + + C VV+T CG D GQLG RK L+ L
Sbjct: 57 PCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLG---HERGRKRLQLILGL 113
Query: 69 DNVV--EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
D V +V G HT+ + E G++++WG N EG LG ++ E P+ V VQ
Sbjct: 114 DAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQ 173
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK--TPLKLESVSG--IVKIASG 180
++ G H++AL +G +Y+WGS +S G +GL G I+ P + +++G I IA G
Sbjct: 174 VACGMKHALALTNNGELYSWGS--NSEGQLGL-GVDIRSEVKPKLINTLAGVPIAFIACG 230
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H + ++ G + G GQLG + +RN + L ++ +
Sbjct: 231 GYHSIAISKSGAIFGWGKNTFGQLG--LNDTQNRNLPHQLQTLRNAKICYAACGEE---- 284
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
++ F++ G + G Y QLG N P + L T ++ G+
Sbjct: 285 --FSVFLTVDGGVFTCGAGMYGQLGHG-------SNNNEILPRQVMELMGSTVTQISCGK 335
Query: 301 HHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
H+LAL S+G++YA+G G+LG N + + PTP
Sbjct: 336 RHTLALVPSQGRVYAWGLGGAGQLG-NNSTRSI--PTP 370
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 223 LEPGEVPLKR-KHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P +V K+ I + G Y I+ G I + G N+Y QLG +
Sbjct: 55 LVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRL------- 107
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
LI L F +A G +H++A+N G+++++G + G+LGL + + P + +
Sbjct: 108 --QLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKT 165
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----------------------- 377
L I +ACG + A+ + G LY WG + QLG
Sbjct: 166 LGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIA 225
Query: 378 ----NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
G ++ G I+ +G++ +G+LGL N ++ P + +L++ I ACG
Sbjct: 226 FIACGGYHSIAISKSGAIFGWGKNTFGQLGL-NDTQNRNLPHQLQTLRNAKICYAACGEE 284
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
S + +G ++ G G QLG+G ++ + P ++ +L TV Q++ G +H++ L
Sbjct: 285 FSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVTQISCGKRHTLALV 342
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4014 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4072 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4124 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4177 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4227
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4228 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4268
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4269 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4323
Query: 497 P 497
P
Sbjct: 4324 P 4324
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3233
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3234 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3274 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + I+KIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIIKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3953 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4011
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4012 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4072 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4126
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4127 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4180 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4232
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4233 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4287
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4288 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4114
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V ++ +GD+ ++ L +D TV++
Sbjct: 4115 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4171
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4172 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4230 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4279
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4280 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4331
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4332 AQVPMEYNHL 4341
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N++++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4216 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4274
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4275 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 181/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3892 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3950
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + +P LES+ + V + SG H + L+S G + + G E
Sbjct: 3951 -YGAGGRLGIGGTESV-SSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4008
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG ++ R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4009 GKLGHGSRSPCDRP--RVIESLRGVEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4060
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4061 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4113
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4114 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4164
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4165 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4205
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4206 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4260
Query: 497 PN 498
P
Sbjct: 4261 PT 4262
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 177/412 (42%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2900 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2957
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V + SG H LT G + + G +
Sbjct: 2958 EATNGRLGLGISS-GTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3017 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3067
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3068 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3120
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3121 DFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3172
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3173 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3212
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3213 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3262
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 47/264 (17%)
Query: 274 SGNTCFFT---------PHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGR 322
S N C +T P L++ L+ + +A S HH LAL + G++Y++G D GR
Sbjct: 398 SRNGCVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 457
Query: 323 LGLKNVSEPVTEPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
LG + + P+ EP I + K + IACG+ S AI +EG LY WG GN +L +
Sbjct: 458 LGHGD-TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDH 516
Query: 379 GKE--DDIL--------------------------NSEGKIYAFGRHDYGRLGLKNVSEP 410
G+ ++IL G+++++G DYG+LG + S+
Sbjct: 517 GRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLG-RGGSDG 575
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P I LQD + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +E
Sbjct: 576 CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 635
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
G L V+ VA+G H + L +
Sbjct: 636 G--LQGKKVIDVAAGSTHCLALTE 657
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 3010
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3011 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3065
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3066 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3125
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR + Q N +G+ +E G ++ ++ G + +G
Sbjct: 3126 GRGGSEGCNVPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3170
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3171 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3222
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3223 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3890 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3948
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3949 TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4008
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G +V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4009 --GKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4063
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4064 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4116
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4117 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4169
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4170 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4224
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4225 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2892 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2946
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 2947 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDG 3006
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3007 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3064
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3065 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3111
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3112 GLVFSWGDGDFGKLGRGGSE------GC-NVPQNIERLNGQGVCQIECGAQFSLALTKSG 3164
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3165 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3223
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3224 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3256
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3257 GSSHSVA 3263
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 150/362 (41%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 386 QIACAEKRFLILSRNGCVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 435
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 436 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 477
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +L S + N +I
Sbjct: 478 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAM----NEILI---MISG 530
Query: 288 LSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L +KF + G +LA G+++++G DYG+LG + S+ P I LQD
Sbjct: 531 LDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 589
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 590 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 649
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 650 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 707
Query: 439 DS 440
S
Sbjct: 708 SS 709
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 186/414 (44%), Gaps = 81/414 (19%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + VE
Sbjct: 3975 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE--SLRGVE 4032
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 4033 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 4085
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4086 VDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4143
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4144 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4193
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4194 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 4245
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS------- 348
+A G H+LA ++ A G+L P P LQ+ IT+
Sbjct: 4246 VACGSAHTLAWSTSKPTSA------GKL-------PAQVPMECNHLQEIPITALRNRLLL 4292
Query: 349 ------IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
+ C C+ D EG L G+G +G IL S+GK AF +
Sbjct: 4293 LHHISELFC-PCIPM-FDLEGWLDETGLGPS--VGFDALRGILISQGKEAAFRK 4342
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2898 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2950
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYMVKKVAVHSG-- 2995
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 2996 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3045
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3046 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3103
Query: 490 VILA 493
LA
Sbjct: 3104 QTLA 3107
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+DG+
Sbjct: 555 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTKDGQ 608
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWGS 146
VY+WG D LG E + L KK + ++AG +H +AL ED V++WGS
Sbjct: 609 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 666
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY------------- 366
+G +G K + V P L + +T IAC + G +Y
Sbjct: 359 WGLIGWKYYAN-VIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDTLAPQL 417
Query: 367 --GWGMGNGYQLG---NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G N ++ +G L + G++Y++G D GRLG + + P+ EP I +
Sbjct: 418 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISAFS 476
Query: 422 DKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
K + IACG+ S AI +EG LY WG GN +L +G+
Sbjct: 477 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGR 518
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V + G+GD +LG G + R L+E L V++V G H + LTED +V+
Sbjct: 604 TKDGQVYSWGKGDNQRLGHGTEEHVRYP-KLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 662
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWGSF 147
+WG ND+ + + P+ LP K V I+ G + S +AW S
Sbjct: 663 SWGSNDQ---CQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSC 710
Query: 148 RDSHGSMGLK 157
S S+GL+
Sbjct: 711 --SEWSIGLR 718
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 989 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G +
Sbjct: 1048 -YGAGGRLGIGGTESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKD 1105
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 1106 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 1157
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 1158 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 1210
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 1211 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 1261
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 1262 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 1302
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 1303 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 1357
Query: 497 P 497
P
Sbjct: 1358 P 1358
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 163/376 (43%), Gaps = 56/376 (14%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA- 178
VQ++ G A+ +G VY+ G ++G +GL G P ++ ++S V K+A
Sbjct: 31 VQVAGGSKSLFAVTVEGKVYSCG--EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 88
Query: 179 -SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
SG H LT G + + G + G+LG ++ + + +E LK K I D
Sbjct: 89 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEA----LKTKRIRD 139
Query: 238 VFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G ++ ++S G + +GL Y +LG D NT P ++K L + +
Sbjct: 140 IACGSSHSAALTSSGELYTWGLGEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQV 192
Query: 297 ASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
A G +LAL EG ++++G D+G+LG + SE P I L + + I CG
Sbjct: 193 ACGSRDAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 251
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
S A+ GV++ WG G DY RLG V +P
Sbjct: 252 FSLALTKSGVVWTWGKG--------------------------DYFRLG-HGSDVHVRKP 284
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
+ L+ K I +A G A+ G +Y WG + Q GNG +P ++G L
Sbjct: 285 QVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--L 342
Query: 475 NNYTVLQVASGGQHSV 490
+ +VA G HSV
Sbjct: 343 EGQKITRVACGSSHSV 358
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 47 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 106
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 107 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG-----L 161
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 162 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 221
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 222 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 266
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 267 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 318
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 319 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 175/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 987 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 1045
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG +D
Sbjct: 1046 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKD 1105
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 1106 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 1160
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 1161 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 1213
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 1214 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 1266
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 1267 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 1321
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 1322 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1352
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 167/406 (41%), Gaps = 58/406 (14%)
Query: 43 GQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGAL 101
G D QLG L ++ +F+ NVV+V G +T +GKVY+ G G L
Sbjct: 1 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60
Query: 102 GREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G + IP+ + K V + +G H+ AL DG V++WG D G +G
Sbjct: 61 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 118
Query: 158 GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
P +E++ I IA G+ H LTS G L T G E G+LG +
Sbjct: 119 SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--- 175
Query: 216 ARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYSQLGEADSEV 271
L+P V + H + V G + ++ +G + ++G ++ +LG SE
Sbjct: 176 -------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSE- 227
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
C P I+ L+ + + G SLAL G ++ +G+ DY RLG
Sbjct: 228 -----GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVH 280
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
V +P + L+ K I +A G A+ G +Y WG + Q GNG
Sbjct: 281 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG------------ 328
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ +PT + L+ + IT +ACG+ S A
Sbjct: 329 ---------------TTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 1095 GEVYSWGEAKDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 1148
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 1149 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 1205
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 1206 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1263
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 1264 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 1313
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 1314 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 1365
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 1366 AQVPMEYNHL 1375
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P Q ++S V + +GG G V + G+GD G+LG M L+E
Sbjct: 72 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR-MNCDKPRLIE 130
Query: 67 DL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKA 122
L + ++ G H+ LT G++YTWG + G LG + ++ P+ V L +
Sbjct: 131 ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRV 189
Query: 123 VQISAG--DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+Q++ G D+ ++AL ++G V++WG G +G G P +E ++ G+ +I
Sbjct: 190 IQVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIE 247
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
GA + LT G + T G + +LG + + +P V L+ K I
Sbjct: 248 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSD----------VHVRKPQVVEGLRGKKIVH 297
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G + ++ G + A+G N++ Q G + V + P L++ L +K T +
Sbjct: 298 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-------PTLVQGLEGQKITRV 350
Query: 297 ASGQHHSLALNS 308
A G HS+A +
Sbjct: 351 ACGSSHSVAWTT 362
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
GLN+ QLG K P ++LS +A G A+ EGK+Y+ G
Sbjct: 1 GLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 53
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 54 EATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG--------- 91
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+ L +GK++++G D G+LG + +P I +L+ K I IACG+ S
Sbjct: 92 --GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSA 148
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + + LA
Sbjct: 149 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDAQTLA 203
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 1250 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 1308
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 1309 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1352
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4013 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4071 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4123 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4226
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4227 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4267
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4322
Query: 497 P 497
P
Sbjct: 4323 P 4323
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3180
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3233
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3234 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 455 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 504
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 546
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 599
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 658
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIACGPAQSFA 776
Query: 438 IDS 440
S
Sbjct: 777 WSS 779
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4071 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4125
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4126 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4179 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4231
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4232 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4286
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4287 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4113
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4114 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4171 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4229 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4279 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4330
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4331 AQVPMEYNHL 4340
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
S L+ + T L IV IA G
Sbjct: 736 SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S + GL
Sbjct: 743 FDTLRVTKP-------------EPTALPGLDTKHIVGIACGPAQSFAWSSCXEWSIGLR 788
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4273
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4274 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4014 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4072 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4124 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4177 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4227
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4228 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4268
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4269 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4323
Query: 497 P 497
P
Sbjct: 4324 P 4324
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 EATNGRLGLGLSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3233
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3234 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3274 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3953 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4011
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4012 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4072 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4126
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4127 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4180 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4232
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4233 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4287
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4288 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4114
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V ++ +GD+ ++ L +D TV++
Sbjct: 4115 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4171
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4172 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4230 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4279
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4280 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4331
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4332 AQVPMEYNHL 4341
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4216 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4274
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4275 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 214/467 (45%), Gaps = 64/467 (13%)
Query: 39 VLTCGQGDTGQLG----LGPDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
VL+ G G G LG G D E R+ L ED VV V G H++ + + G+++ W
Sbjct: 48 VLSFGDGSHGALGHTDCFGGDAYEPREINGLPED---VVSVGAGHYHSMAVAQTGELWAW 104
Query: 94 GCNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSH--SVALLEDGTVYAWGSFR 148
G N EG LG E +G++ PQ V + +SA S S+A+ DG+++ WG +
Sbjct: 105 GRNLEGQLG-ERDGNTREKWHQPQRVRGLESVEVVSARGSGVVSMAIARDGSLWTWG--K 161
Query: 149 DSHGSMGLKGEGI-QKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +GL + + +TP ++E++ G +V++A G H + T+ G++ + G G+LG
Sbjct: 162 SKRGQLGLGTKIMYAQTPKRVEALVGQQVVQVALGWGHALARTAEGHVYSWGYAANGRLG 221
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
Q S S +A + P + R + + Y +
Sbjct: 222 --FQLSDSESAETSVKKTSP--TAIARVDNESIEEAAYRQVLE----------------- 260
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D E +KS + P I SL + T ++ G HSL LN +G++ +FG + G+LG
Sbjct: 261 --DMEKEKS-PVLAWEPVRINSLCSQHVTEISCGMDHSLTLNEKGELCSFGDNSLGQLG- 316
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
T I ++Q + V I E VL+ G G G+ L +
Sbjct: 317 --------RSTAISAVQSSIFAVENSEDHVQGLIRGEKVLHV-GAGLGHSLA-------V 360
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
++G IY++G + +LG ++ + + P + ++ + + G S A+ S+G L+
Sbjct: 361 TAQGSIYSWGWNAGHQLG-RDERQDSSLPACVEDVEGDVVALVG-GRAHSLALTSQGQLW 418
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG G +LG G D P+ +E L N+ + +VA G HS+IL
Sbjct: 419 VWGSGKNGRLGLGSPADEPSPLLLE--SLENHCIAEVACGFDHSLIL 463
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 51/335 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G + T G+ GQLGLG +M +T VE L VV+V +G H + T +G VY+WG
Sbjct: 154 GSLWTWGKSKRGQLGLGTKIMYAQTPKRVEALVGQQVVQVALGWGHALARTAEGHVYSWG 213
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV------ALLED-----GTVYA 143
G LG + DSE +V I+ D+ S+ +LED V A
Sbjct: 214 YAANGRLGFQLS-DSESAETSVK-KTSPTAIARVDNESIEEAAYRQVLEDMEKEKSPVLA 271
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQ 201
W P+++ S+ + +I+ G DH + L +G L + G
Sbjct: 272 W-------------------EPVRINSLCSQHVTEISCGMDHSLTLNEKGELCSFGDNSL 312
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGV-YNTFISSKGSILAFGLN 259
GQLGR T SA +++ + E L R + + V G+ ++ ++++GSI ++G N
Sbjct: 313 GQLGRSTAISAVQSSIFAVENSEDHVQGLIRGEKVLHVGAGLGHSLAVTAQGSIYSWGWN 372
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
QLG E Q S P ++ + + L G+ HSLAL S+G+++ +G
Sbjct: 373 AGHQLGR--DERQDSS-----LPACVEDV-EGDVVALVGGRAHSLALTSQGQLWVWGSGK 424
Query: 320 YGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACG 352
GRLGL + P EP+P + SL++ I +ACG
Sbjct: 425 NGRLGLGS---PADEPSPLLLESLENHCIAEVACG 456
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 83/418 (19%)
Query: 89 KVYTWGCNDEGALGR-EAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGS 146
+V ++G GALG + G + P+ +N LP+ V + AG HS+A+ + G ++AWG
Sbjct: 47 RVLSFGDGSHGALGHTDCFGGDAYEPREINGLPEDVVSVGAGHYHSMAVAQTGELWAWG- 105
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKI----ASGADHFVMLTSR-GNLLTAGCPEQ 201
R+ G +G + ++ + + V G+ + A G+ M +R G+L T G ++
Sbjct: 106 -RNLEGQLGERDGNTREKWHQPQRVRGLESVEVVSARGSGVVSMAIARDGSLWTWGKSKR 164
Query: 202 GQLGRITQRSASRNARRGMSFL--EPGEVPLKRKH-IDDVFTG-VYNTFISSKGSILAFG 257
GQLG T+ ++ +R + + + +V L H + G VY+ ++ G L F
Sbjct: 165 GQLGLGTKIMYAQTPKRVEALVGQQVVQVALGWGHALARTAEGHVYSWGYAANGR-LGFQ 223
Query: 258 LNN----------------------------YSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
L++ Y Q+ E D E +KS + P I SL
Sbjct: 224 LSDSESAETSVKKTSPTAIARVDNESIEEAAYRQVLE-DMEKEKS-PVLAWEPVRINSLC 281
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV---------TEPTPIPS 340
+ T ++ G HSL LN +G++ +FG + G+LG V +E
Sbjct: 282 SQHVTEISCGMDHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFAVENSEDHVQGL 341
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
++ + + + G S A+ ++G +Y WG G+QLG + D
Sbjct: 342 IRGEKVLHVGAGLGHSLAVTAQGSIYSWGWNAGHQLGRDERQDSSLPACVEDVEGDVVAL 401
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACG 431
L S+G+++ +G GRLGL + P EP+P + SL++ I +ACG
Sbjct: 402 VGGRAHSLALTSQGQLWVWGSGKNGRLGLGS---PADEPSPLLLESLENHCIAEVACG 456
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 13 AENPSQKVFVTSEAVPTLKCKTGGGVVLT-----CGQGDT--GQLGLGPDV--MERKTFA 63
A P + + S+ V + C + L C GD GQLG + ++ FA
Sbjct: 271 AWEPVRINSLCSQHVTEISCGMDHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFA 330
Query: 64 LVEDLDNV---------VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQ 114
+ D+V + V G H++ +T G +Y+WG N LGR+ DS
Sbjct: 331 VENSEDHVQGLIRGEKVLHVGAGLGHSLAVTAQGSIYSWGWNAGHQLGRDERQDSSLPAC 390
Query: 115 TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG- 173
++ V + G +HS+AL G ++ WGS ++ G +GL + +PL LES+
Sbjct: 391 VEDVEGDVVALVGGRAHSLALTSQGQLWVWGSGKN--GRLGLGSPADEPSPLLLESLENH 448
Query: 174 -IVKIASGADHFVML 187
I ++A G DH ++L
Sbjct: 449 CIAEVACGFDHSLIL 463
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 180/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H + LT G + + G +
Sbjct: 3019 EATNGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ I+S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3233
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3234 -------------------DYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3274 TDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 124/247 (50%), Gaps = 38/247 (15%)
Query: 282 PHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P L++ L+ + +A S HH LAL + G+++++G D GRLG + + P+ EP I
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD-TVPLEEPKMIS 543
Query: 340 SLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------ 383
+L K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 544 ALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG 603
Query: 384 ----------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+ G+++++G DYG+LG + S+ P I LQD +
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVK 662
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+ CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+ VA+G
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVVDVAAGST 720
Query: 488 HSVILAK 494
H + L +
Sbjct: 721 HCLALTE 727
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H + LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS A+ G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGTDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 57/349 (16%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ G ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYMQAYNSDTLGPQLVQGLASR----------NIVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG + + +S L + KH+ + G
Sbjct: 506 HHYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQA---GKHVVHIACG 560
Query: 242 -VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--S 298
Y+ I+++G + +G NY +LG SE Q P L+ L K ++ S
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-------IPMLVTGLKGLKVIDVSCGS 613
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +LA+ G+++++G DYG+LG + S+ P I LQD + + CG+ S A
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIY 392
+ +G +Y WG G+ +LG+G E+ + L + +++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 732
Query: 393 AFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
++G +D + +++P EPT +P L K I IACG SFA S
Sbjct: 733 SWGSNDQCQHFDTLRITKP--EPTALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP------ 119
N+V++ G H + L G+V++WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLG---HGDTVPLEEPKMISALSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G Q P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + +++P EPT +P L K I IAC
Sbjct: 712 VVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKP--EPTALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYG 367
GK+YA G GRLGL S V P I +L + + +A G + A+ +G ++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3071
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG G+ +GK+ F R + + P I +L+ K I
Sbjct: 3072 WGEGD---------------DGKLGHFSRMNCDK------------PRLIEALKTKRIRD 3104
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IACG+ S AI S G LY WG+G +LG+G L+P + K L + V+QVA G +
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSR 3162
Query: 488 HSVILA 493
+ LA
Sbjct: 3163 DAQTLA 3168
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
SG +L L + ++++G DYG+LG + S+ P I SL + + CG+ S
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4082
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
A+ G +Y WG G DY RLG + V P +
Sbjct: 4083 ALTKSGAVYTWGKG--------------------------DYHRLG-HGSDDHVRRPRQV 4115
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQL 474
LQ K + +IA G+ +G +Y WG + QLG+G + I P ++GK++
Sbjct: 4116 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4175
Query: 475 NNYTVLQVASGGQHSVILAKPKP 497
N +VA G H++ + KP
Sbjct: 4176 N-----RVACGSAHTLAWSTSKP 4193
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+L+ G IY +G + G+LG ++ V PTP +L + G FA+ ++
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALAALRPIQLIGGEQTLFAVTAD 4006
Query: 363 GVLYGWGMGNGYQL-----GNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
G + GY++ G+G + L + ++++G DYG+LG + S+ P
Sbjct: 4007 GKVEAL---QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMK 4062
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
I SL + + CG+ S A+ G +Y WG G+ ++LG+G +D + P +++G L
Sbjct: 4063 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQG 4120
Query: 477 YTVLQVASGGQHSV 490
V+ +A+G H V
Sbjct: 4121 KKVIAIATGSLHCV 4134
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G +V LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSVALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK V ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
S L+ + T L IV IA G
Sbjct: 736 SNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFA-LVEDLD--NVVEVVVGG--MHTVCLTEDG 88
T G + T G+G+ G+LG G E +T LV L V++V G T+ +TE+G
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENG 625
Query: 89 KVYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+V++WG D G LGR + + I + +L V++ G SVAL +DG VY+WG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G E + P LE + G +V +A+G+ H + LT + + G +Q Q
Sbjct: 684 --KGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 204 ---LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
RIT+ EP +P L KHI + G +F S S + GL
Sbjct: 742 HFDTLRITKP-------------EPTALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD------NVVEVVVGGMHTVCLTEDGKV 90
G V + G GD G+LG G D + + ++ L +VV + G ++ +T +G++
Sbjct: 515 GEVFSWGCGDGGRLGHG-DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWGS 146
YTWG + G LG + D + IP V K K + +S +GD+ ++A+ E+G V++WG
Sbjct: 574 YTWGRGNYGRLGHGSSED-QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+G +G G KTP +E + +VK+ G+ V LT G + + G + +L
Sbjct: 633 --GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRL 690
Query: 205 GRITQ 209
G T+
Sbjct: 691 GHGTE 695
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVA 134
G T+CLT+D V++WG D G LGR D +P ++ V++ G SVA
Sbjct: 4025 GDAQTLCLTDDDTVWSWGDGDYGKLGR-GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVA 4083
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGN 192
L + G VY WG + + +G + + P +++ + G ++ IA+G+ H V T G
Sbjct: 4084 LTKSGAVYTWG--KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141
Query: 193 LLTAGCPEQGQLGRITQRSASR 214
+ T G ++GQLG T + R
Sbjct: 4142 VYTWGDNDEGQLGDGTTNAIQR 4163
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4085 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4143
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4144 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 68/286 (23%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + +Q+ G+ A+ DG V A
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPEQGQ 203
+R ++ IA SG + LT + + G + G+
Sbjct: 4014 GYR-------------------------VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4048
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----------YNTFISSKGSI 253
LGR G S + +VP+K D TG+ ++ ++ G++
Sbjct: 4049 LGR------------GGS--DGCKVPMKI----DSLTGLGVVKVECGSQFSVALTKSGAV 4090
Query: 254 LAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+G +Y +LG +D V++ P ++ L KK +A+G H + +G++
Sbjct: 4091 YTWGKGDYHRLGHGSDDHVRR--------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4142
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
Y +G +D G+LG + + P + +LQ K I +ACG+ + A
Sbjct: 4143 YTWGDNDEGQLG-DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
C T V + G GD G+LG G P ++ T VV+V G +V L
Sbjct: 4031 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL------GVVKVECGSQFSVAL 4084
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYA 143
T+ G VYTWG D LG ++ Q L KK + I+ G H V EDG VY
Sbjct: 4085 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4144
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADH 183
WG + G +G + P + ++ G I ++A G+ H
Sbjct: 4145 WGD--NDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4184
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 173/410 (42%), Gaps = 57/410 (13%)
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG N +G LG S P V LP ++AG HS+AL G V AWG R
Sbjct: 59 FAWGDNSDGQLGNGTTTGSS-TPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWG--R 115
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ G +G + TP+ ++ +G I IA+GA H + LTS G +L G GQLG
Sbjct: 116 NFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGN 175
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
+ N + P V I V G +++ ++S G++LA+G N+ QLG
Sbjct: 176 ----GGTTNMSTPVGVSLPAGV-----TITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLG 226
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG- 324
+ +G++ L + +G HSLAL S G A+G + G+LG
Sbjct: 227 NGTT----TGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGN 282
Query: 325 --LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
N S PV P TIT++A G S A+ + G + WG QLGNG
Sbjct: 283 GDTTNRSTPVDVDLP----AGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTT- 337
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
S PV P TI +IA G A+ + G
Sbjct: 338 ----------------------TGSSTPVDVDLP----TGATINAIAAGFDFGLALTTAG 371
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ WG QLGNG + P+ ++ T+ VA+GGQHS+ L
Sbjct: 372 AVVAWGRNVSGQLGNGDTINRSTPVDVDLPA--GVTITAVAAGGQHSMAL 419
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 145/318 (45%), Gaps = 30/318 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
+ V GG+H++ LT G V WG N G LG + + P V+LP I+AG
Sbjct: 91 ITAVTAGGLHSLALTSTGAVLAWGRNFSGQLG-NGDTTNRSTPVDVDLPAGTTITAIAAG 149
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVM 186
HS+AL GTV AWG + HG +G G TP+ + +G I +A+GA H +
Sbjct: 150 AFHSLALTSAGTVLAWG--ENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLA 207
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-----RKHIDDVFTG 241
+TS G +L G GQLG T +S P +V L V
Sbjct: 208 VTSTGAVLAWGDNSNGQLGNGTTTGSS----------TPVDVDLPAGTTITAVAAGVAGA 257
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ ++S G+ LA+G N QLG D+ + TP + + T +A+G
Sbjct: 258 AHSLALTSTGAALAWGNNADGQLGNGDTTNRS-------TPVDVDLPAGVTITAVAAGGL 310
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
HSLAL + G + A+GR+ G+LG + + P + TI +IA G A+ +
Sbjct: 311 HSLALTAAGAVVAWGRNVSGQLG-NGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTT 369
Query: 362 EGVLYGWGMGNGYQLGNG 379
G + WG QLGNG
Sbjct: 370 AGAVVAWGRNVSGQLGNG 387
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 95/227 (41%), Gaps = 41/227 (18%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
I + + A+G N+ QLG + T TP + + T + +G HSLAL
Sbjct: 52 IRASDTYFAWGDNSDGQLGNGTT-------TGSSTPVDVYLPAGTTITAVTAGGLHSLAL 104
Query: 307 NSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
S G + A+GR+ G+LG N S PV P TIT+IA G S A+ S G
Sbjct: 105 TSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLP----AGTTITAIAAGAFHSLALTSAG 160
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
+ WG QLGNG G N+S PV P
Sbjct: 161 TVLAWGENLHGQLGNG-----------------------GTTNMSTPVGVSLP----AGV 193
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
TIT++A G S A+ S G + WG + QLGNG P+ ++
Sbjct: 194 TITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVD 240
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 174/378 (46%), Gaps = 58/378 (15%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP--LKLESVSGIVKIASGA 181
QIS G SHS+AL +G ++AWG D G +G Q TP +++ +++ I + G
Sbjct: 159 QISGGWSHSLALDSEGKLWAWGLNED--GQLGDGTNDSQTTPVAVQINALTTITAVDCGG 216
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT- 240
DH + L S G + G G+LG T + S + ++ D+
Sbjct: 217 DHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVP-----------VPVPNLTDIIAI 265
Query: 241 ---GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G Y+ +SS GS+L +G N+ QLG +++ Q S T + L+K +S
Sbjct: 266 SAGGEYSIALSSDGSVLTWGANSDGQLGNGNTD-QNSVPTKISSLPLMKGIS-------- 316
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRL--GLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+G+ HSLA+ +G +YA+G +D G++ G K+ PV P + L D I ++ G
Sbjct: 317 AGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTD--IDAVCAGATF 374
Query: 356 SFAIDSEGVLYGWGMGNGYQLGN-----------------------GKEDDILNSEGKIY 392
S A+ +G ++ WG+ + QLG+ G + + GK+
Sbjct: 375 SLALGIDGRVWAWGLNDEGQLGDGTNTNSTTPVEVTNLAKISAVACGSDHSLAIRNGKVK 434
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
++G +D G+LG + + P + L D I +A G S AI S+G +Y WG+
Sbjct: 435 SWGLNDEGQLG-DGSTRSSSAPLDVTGLSD--IVYVAAGESHSLAITSKGNIYVWGLNGD 491
Query: 453 YQLGNGKEDDILEPMKIE 470
QLG+G P I+
Sbjct: 492 GQLGDGTNRSSRTPKTID 509
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 167/348 (47%), Gaps = 29/348 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + G + GQLG G + + A+ + L + V GG H++ L G+V+ WG
Sbjct: 174 GKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGY 233
Query: 96 NDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E + NL + ISAG +S+AL DG+V WG+ +S G
Sbjct: 234 NGDGELGGGTTENNSNVPVPVPVPNL-TDIIAISAGGEYSIALSSDGSVLTWGA--NSDG 290
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G P K+ S+ + I++G H + +T G + G ++GQ+G ++SA
Sbjct: 291 QLGNGNTDQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGN-GEKSA 349
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEV 271
L P +V ID V G ++ + G + A+GLN+ QLG+
Sbjct: 350 DN------PVLNPVQV-QGLTDIDAVCAGATFSLALGIDGRVWAWGLNDEGQLGDGT--- 399
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
NT TP + +L+ K + +A G HSLA+ + GK+ ++G +D G+LG +
Sbjct: 400 ----NTNSTTPVEVTNLA--KISAVACGSDHSLAIRN-GKVKSWGLNDEGQLG-DGSTRS 451
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L D I +A G S AI S+G +Y WG+ QLG+G
Sbjct: 452 SSAPLDVTGLSD--IVYVAAGESHSLAITSKGNIYVWGLNGDGQLGDG 497
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ S+G + A+GLN QLG+ ++ Q TP ++ + T + G HS+AL
Sbjct: 170 LDSEGKLWAWGLNEDGQLGDGTNDSQT-------TPVAVQINALTTITAVDCGGDHSMAL 222
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+S G+++A+G + G LG P P+P I +I+ G S A+ S+G +
Sbjct: 223 DSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAGGEYSIALSSDGSVL 282
Query: 367 GWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRL 402
WG + QLGNG D + +G +YA+G +D G++
Sbjct: 283 TWGANSDGQLGNGNTDQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQI 342
Query: 403 --GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
G K+ PV P + L D I ++ G S A+ +G ++ WG+ + QLG+G
Sbjct: 343 GNGEKSADNPVLNPVQVQGLTD--IDAVCAGATFSLALGIDGRVWAWGLNDEGQLGDGTN 400
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ P+++ N + VA G HS+ +
Sbjct: 401 TNSTTPVEV----TNLAKISAVACGSDHSLAI 428
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 65/366 (17%)
Query: 160 GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR----- 214
G Q P V +I+ G H + L S G L G E GQLG T S +
Sbjct: 144 GTQPQPAPTPGVV-TPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQ 202
Query: 215 -NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
NA ++ ++ G G ++ + S G + A+G N +LG +E
Sbjct: 203 INALTTITAVDCG--------------GDHSMALDSLGRVWAWGYNGDGELGGGTTENNS 248
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
+ P+L ++ +++G +S+AL+S+G + +G + G+LG N + +
Sbjct: 249 NVPVPVPVPNLTDIIA------ISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQ-NS 301
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK---EDDILNS--- 387
PT I SL + I+ G S A+ +G +Y WG+ + Q+GNG+ ++ +LN
Sbjct: 302 VPTKISSL--PLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQV 359
Query: 388 ---------------------EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
+G+++A+G +D G+LG + T P+ I+
Sbjct: 360 QGLTDIDAVCAGATFSLALGIDGRVWAWGLNDEGQLGDGTNTNSTT---PVEVTNLAKIS 416
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
++ACG+ S AI G + WG+ + QLG+G P+ + G ++ VA+G
Sbjct: 417 AVACGSDHSLAI-RNGKVKSWGLNDEGQLGDGSTRSSSAPLDVTGLS----DIVYVAAGE 471
Query: 487 QHSVIL 492
HS+ +
Sbjct: 472 SHSLAI 477
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 28/258 (10%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
V + G HTV L DG V+ WG ND G LG + + IP V V I+AG
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLG-DGTTTNRTIPVQVKGISDVVAIAAGMY 286
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMG--LKGEGIQKTPLKLESVSGIVKIASGADHFVMLT 188
H+VAL DGTV+AWG + H +G E TP++++ +S + IA+GA + V+L
Sbjct: 287 HTVALKNDGTVWAWGD--NEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLK 344
Query: 189 SRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
+ G + G E G+LG T S + G+S ++ + G Y+T +
Sbjct: 345 NDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGIS------------NVKAIAAGAYHTVV 392
Query: 248 -SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ G++ +G N+Y +LG + V S TP +K +SD K +A+G H++AL
Sbjct: 393 LKNDGTVWTWGYNHYGELGNG-TTVDSS------TPVQVKGISDVK--AIAAGACHTVAL 443
Query: 307 NSEGKIYAFGRHDYGRLG 324
++G ++A+G + YG LG
Sbjct: 444 KNDGTVWAWGCNYYGELG 461
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 28 PTLKCKTGG----------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVG 77
PT+K G G V G D GQLG G R V+ + +VV + G
Sbjct: 226 PTVKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGT-TTNRTIPVQVKGISDVVAIAAG 284
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-EFIPQTVNLPKKAVQISAGDSHSVALL 136
HTV L DG V+ WG N+ LG E + P V I+AG S++V L
Sbjct: 285 MYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLK 344
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
DGTV+AWG + +G +G TP+++ +S + IA+GA H V+L + G + T
Sbjct: 345 NDGTVWAWGV--NEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYHTVVLKNDGTVWTW 402
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGS 252
G G+LG T +S P++ K I DV + + + G+
Sbjct: 403 GYNHYGELGNGTTVDSS--------------TPVQVKGISDVKAIAAGACHTVALKNDGT 448
Query: 253 ILAFGLNNYSQLGE 266
+ A+G N Y +LG
Sbjct: 449 VWAWGCNYYGELGN 462
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 128/262 (48%), Gaps = 40/262 (15%)
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G Y+T + + G++ A+G N+ QLG+ + T P +K +SD +
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTT-------TNRTIPVQVKGISD--VVAI 281
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV-TEPTPIPSLQDKTITSIACGNCV 355
A+G +H++AL ++G ++A+G +++ +LG + E + P + + D + +IA G
Sbjct: 282 AAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISD--VKAIAAGASY 339
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKI 391
+ + ++G ++ WG+ +LG+G ++ +L ++G +
Sbjct: 340 TVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYHTVVLKNDGTV 399
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+ +G + YG LG + T P + + D + +IA G C + A+ ++G ++ WG
Sbjct: 400 WTWGYNHYGELGNGTTVDSST-PVQVKGISD--VKAIAAGACHTVALKNDGTVWAWGCNY 456
Query: 452 GYQLGNGKEDDILEPMKIEGKQ 473
+LGNG D P++++ +
Sbjct: 457 YGELGNGTAVDSSTPVQVKWQN 478
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V G + QLG E T V+ + +V + G +TV L DG V+ WG
Sbjct: 295 GTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDGTVWAWGV 354
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N+ G LG + ++ F P VN I+AG H+V L DGTV+ WG + +G +G
Sbjct: 355 NEYGKLG-DGTTNNSFTPVQVNGISNVKAIAAGAYHTVVLKNDGTVWTWG--YNHYGELG 411
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
TP++++ +S + IA+GA H V L + G + GC G+LG T +S
Sbjct: 412 NGTTVDSSTPVQVKGISDVKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSS 469
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G + G+LG G T V + NV + G HTV L DG V+TWG N
Sbjct: 347 GTVWAWGVNEYGKLGDGT-TNNSFTPVQVNGISNVKAIAAGAYHTVVLKNDGTVWTWGYN 405
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG DS P V I+AG H+VAL DGTV+AWG + +G +G
Sbjct: 406 HYGELGNGTTVDSS-TPVQVKGISDVKAIAAGACHTVALKNDGTVWAWGC--NYYGELGN 462
Query: 157 KGEGIQKTPLKLE 169
TP++++
Sbjct: 463 GTAVDSSTPVQVK 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 99/198 (50%), Gaps = 36/198 (18%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A+G +H++AL ++G ++A+G +D G+LG + T P + + D + +IA G
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLG-DGTTTNRTIPVQVKGISD--VVAIAAGMYH 287
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV-TEP 414
+ A L ++G ++A+G +++ +LG + E + P
Sbjct: 288 TVA--------------------------LKNDGTVWAWGDNEHDQLGNETTKEEYHSTP 321
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
+ + D + +IA G + + ++G ++ WG+ +LG+G ++ P+++ G +
Sbjct: 322 VQVKGISD--VKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNG--I 377
Query: 475 NNYTVLQVASGGQHSVIL 492
+N V +A+G H+V+L
Sbjct: 378 SN--VKAIAAGAYHTVVL 393
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 35/305 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G + +CG D GQLG + + K L+ L+N + + G H++ LT G+VY
Sbjct: 363 TNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVY 422
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG N G LG+E + + IP+ + K+ VQI+AG H +AL G +YAWGS
Sbjct: 423 SWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAY 482
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-- 205
+G+ E + TP ++S++G I IA G +H ++ G + G GQLG
Sbjct: 483 GQLGLGMTNEKV-STPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLN 541
Query: 206 RITQRSASRNARR----GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
+ R R G+ ++ G DD ++ F+++ G + G +
Sbjct: 542 DLNSRQFPTQLRTLRSLGVRYVSCG---------DD-----FSVFLTAGGGVFTCGAGTF 587
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDY 320
QLG + P ++ L K T +A G+ H+LA S GKIY FG
Sbjct: 588 GQLGHGSCNNE-------ILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGV 640
Query: 321 GRLGL 325
G+LG+
Sbjct: 641 GQLGI 645
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 177/396 (44%), Gaps = 66/396 (16%)
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKI-------------------ASGADHFVMLTSR 190
++G M + GE ++ P++ E + K+ A GA H ++LT+
Sbjct: 306 TNGHMTVDGENVECGPIQGEVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTND 365
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISS 249
G + + G + GQLG + ++ + + L+ I G ++ +++
Sbjct: 366 GKMYSCGNNDHGQLGHDVESLPNKRPQLLTA--------LENYIITQACCGTAHSLALTN 417
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + ++G N QLG Q++ T P LI+S++ K+ +A+G +H LAL +
Sbjct: 418 WGQVYSWGSNAVGQLG------QETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNS 471
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G++YA+G + YG+LGL +E V+ PT + SL I IACG SFA+ G ++GWG
Sbjct: 472 GELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWG 531
Query: 370 MGNGYQLG----NGKE-------------------DD---ILNSEGKIYAFGRHDYGRLG 403
QLG N ++ DD L + G ++ G +G+LG
Sbjct: 532 KNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLG 591
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDD 462
+ + + P + L IT IACG + A + S G +YG+G+ QLG G +
Sbjct: 592 HGSCNNEIL-PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
P + G + V Q S LA KP+
Sbjct: 651 YNTPQIVRGPWQSQILTFSV----QMSEELAAIKPD 682
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 148/322 (45%), Gaps = 37/322 (11%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAG 128
+ G HT+ LT DGK+Y+ G ND G LG + E PQ + + + Q G
Sbjct: 349 IARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCG 408
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI-QKTPLKLESVSG--IVKIASGADHFV 185
+HS+AL G VY+WGS ++ G +G + + Q P + S++ +V+IA+G H +
Sbjct: 409 TAHSLALTNWGQVYSWGS--NAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCL 466
Query: 186 MLTSRGNLLTAGCPEQGQLGR-ITQRSASRN------ARRGMSFLEPGEVPLKRKHIDDV 238
LT+ G L G GQLG +T S A ++F+ G
Sbjct: 467 ALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACG------------ 514
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G ++ +S G+I +G N + QLG D ++ P +++L ++
Sbjct: 515 --GNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ-------FPTQLRTLRSLGVRYVSC 565
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G S+ L + G ++ G +G+LG + + + P + L IT IACG + A
Sbjct: 566 GDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL-PRMVFELMGSKITQIACGRRHTLA 624
Query: 359 -IDSEGVLYGWGMGNGYQLGNG 379
+ S G +YG+G+ QLG G
Sbjct: 625 FVPSRGKIYGFGLSGVGQLGIG 646
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 168/348 (48%), Gaps = 29/348 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQLGLG V+E + V +V G HTV L +DG VYT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHG-KKVCDVGCGLKHTVFLLDDGTVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKK-AVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
CND G LG E V L + V +S G+SH++AL + G +++WG S G
Sbjct: 60 CNDLGQLGHEKPRKKP--EHVVALDAQIIVAVSGGESHTLALNDKGQIFSWG--LGSDGQ 115
Query: 154 MGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+GL E + P ++ +S I ++A G H L+ G + + G + GQLG +
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLG-LGMH 174
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+S + + + L+ +P + G ++ I+ G++ +G N + QLG D+
Sbjct: 175 GSSISTPQIIQSLQ--GIPFAQLSAG----GAHSFAITLSGAVFGWGRNKFGQLGLNDT- 227
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
N +F P L+KSL ++ ++ G+ H+ AL EG ++ FG YG+LG + +
Sbjct: 228 -----NDRWF-PALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAID-SEGVLYGWGMGNGYQLG 377
+ P + L +T I+CG + A S G +Y +G+G QLG
Sbjct: 282 EIN-PRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K E G + + G H V L G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R + V L + I V G +T ++ KG I ++G
Sbjct: 61 NDLGQLGHEKPRKKPEHV-----------VALDAQIIVAVSGGESHTLALNDKGQIFSWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L + QLG + E C P IK LSD + +A G HS AL+ G+++++G+
Sbjct: 110 LGSDGQLGLNNFE------ECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LGL ++ P I SLQ ++ G SFAI G ++GWG QLG
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
+D L EG ++ FG YG+LG + + +
Sbjct: 224 LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEI 283
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAID-SEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T I+CG + A S G +Y +G+G QLG + P ++
Sbjct: 284 N-PRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 29/310 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGG--MHTVCLTEDGKVYTWG 94
G V TCG D GQLG RK V LD + V V G HT+ L + G++++WG
Sbjct: 53 GTVYTCGCNDLGQLG---HEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWG 109
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+G LG + +P+ + + Q++ G HS AL + G V++WG +
Sbjct: 110 LGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQL 169
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G+ G I TP ++S+ GI ++++G H +T G + G + GQLG
Sbjct: 170 GLGMHGSSI-STPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + + V G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDTNDRWFPALLK----SLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-SEGKIYAFGRHDYGRLGLKNV 328
+ P + L T ++ G+ H+LA S GK+Y+FG G+LG ++
Sbjct: 280 NHE-------INPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRST 332
Query: 329 SEPVTEPTPI 338
P P+
Sbjct: 333 CNR-KSPAPV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTW 93
GG V + GQ GQLGLG T +++ L + ++ GG H+ +T G V+ W
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGW 214
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G N G LG D F +L ++ + +S G+ H+ AL ++G V+ +G+ +G
Sbjct: 215 GRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGA--GGYG 272
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT-SRGNLLTAGCPEQGQLGRITQ 209
+G + P K+ + G + +I+ G H + T S G + + G GQLG T+
Sbjct: 273 QLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG--TR 330
Query: 210 RSASRNA 216
+ +R +
Sbjct: 331 STCNRKS 337
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G YG+LGL + E V EP K + + CG
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCG------------------ 42
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
K L +G +Y G +D G+LG + +P +P + +L + I +++
Sbjct: 43 --------LKHTVFLLDDGTVYTCGCNDLGQLGHE---KPRKKPEHVVALDAQIIVAVSG 91
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G + A++ +G ++ WG+G+ QLG N E+ + P I K L++ + QVA G +HS
Sbjct: 92 GESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNI--KCLSDVQIAQVACGYRHS 149
Query: 490 VILAK 494
L+K
Sbjct: 150 HALSK 154
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 180/400 (45%), Gaps = 65/400 (16%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + ++A G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + QLG ++ R L P L+ I + G ++ +S G +L+
Sbjct: 65 GSNDYSQLG---HDLPTKRPRMSPFLLIP---ELQDYVIIQICCGSRHSLALSDWGQVLS 118
Query: 256 FGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G N+ QLG A D E+ + P +++ L K +A G +HSLAL S G++Y+
Sbjct: 119 WGDNDCGQLGHATDKEIVQ-------LPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 171
Query: 315 FGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+G + YG+LG+ + ++ P + +L + +IACG SF I G ++GWG N
Sbjct: 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 231
Query: 373 GYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKN 406
QLG E + L +EG ++ G YG+LG
Sbjct: 232 CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG-HG 290
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILE 465
S P + L TIT +ACGN + A + S G +Y +G+G+ QLG ++
Sbjct: 291 FSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 350
Query: 466 PMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
P + G ++ + + Q+ SGG S++
Sbjct: 351 PQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIV 390
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 159/342 (46%), Gaps = 48/342 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKT- 61
+Q PSQ + AV + C T G V CG D QLG P R +
Sbjct: 26 EQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSP 85
Query: 62 FALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-- 117
F L+ +L + ++++ G H++ L++ G+V +WG ND G LG + + +P+ V
Sbjct: 86 FLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQL 145
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGI 174
+ K VQI+ G++HS+AL G +Y+WGS + +G +G+ PL+L ++ GI
Sbjct: 146 VTKTVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPNDLTHCNYPLRLTTLLGI 203
Query: 175 --VKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPG 226
IA G +H +++ G + G GQLG T RS + G+ F+ G
Sbjct: 204 PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 263
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
+ ++ F++++G + G Y QLG S + P ++
Sbjct: 264 D--------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVM 302
Query: 287 SLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
L T +A G H+LAL S G++YAFG G+LG ++
Sbjct: 303 ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRS 344
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 38/305 (12%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P + V G +T F+++ G + A G N+YSQLG D ++ + F
Sbjct: 29 LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH-DLPTKRPRMSPFL 87
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
LI L D + G HSLAL+ G++ ++G +D G+LG E V P +
Sbjct: 88 ---LIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ 144
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG +D
Sbjct: 145 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP 204
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + + PT + +L+ + +ACG
Sbjct: 205 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNR-SYPTQLKTLRTLGVRFVACG 263
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 264 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 321
Query: 492 LAKPK 496
L +
Sbjct: 322 LVPSR 326
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 157/387 (40%), Gaps = 59/387 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ D V +V G HT+ LT GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGK 60
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWG 145
VY G ND LG + + + +P+ +QI G HS+AL + G V +WG
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCP 199
G G K ++L V +V+IA G +H + LTS G L + G
Sbjct: 121 D-----NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSN 175
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
GQLG + + + + +PL G ++ IS G++ +G N
Sbjct: 176 IYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRN 230
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
N QLG D E +S P +K+L +A G S+ L +EG ++ G
Sbjct: 231 NCGQLGLND-ETNRS------YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 283
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG S P + L TIT +ACGN + A+
Sbjct: 284 YGQLG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL-------------------- 322
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKN 406
+ S G++YAFG G+LG ++
Sbjct: 323 -----VPSRGRVYAFGLGSSGQLGTRS 344
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 390 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
++Y +G +G+LGL + E + P+ IP D + +ACG+ + + + G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 449 MGNGYQLGNG--KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ QLG+ + + P + +L +Y ++Q+ G +HS+ L+
Sbjct: 66 SNDYSQLGHDLPTKRPRMSPFLL-IPELQDYVIIQICCGSRHSLALS 111
>gi|341904654|gb|EGT60487.1| hypothetical protein CAEBREN_11623 [Caenorhabditis brenneri]
Length = 539
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 188/414 (45%), Gaps = 42/414 (10%)
Query: 28 PTLKC-----KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHT 81
PTL K G VL+CG+G LG + + + E N ++VV G H+
Sbjct: 115 PTLSIDMFIPKQMGDRVLSCGEGAALGHPLGTTTKKPRKIDIFEKEGLNPIQVVAGKNHS 174
Query: 82 VCLTEDGKVYTWGCNDEGAL---GREAEG-DSEF--IP--QTVNLPKKAVQISAGDSHSV 133
LT DG+V+ G N++G++ G + EG + EF IP + + K V ++AG S ++
Sbjct: 175 AVLTSDGQVFMCGINEKGSVPVGGVKHEGSNDEFTKIPFSEEIKSEGKIVMLAAGASFTI 234
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTS 189
AL G+V+ WG + S L +Q+ P + ++ +VKIA+G H +L
Sbjct: 235 ALTNKGSVFGWGDISSVNPSADLDILIARMQENPTIIIHQAKRRVVKIAAGEKHLALLDE 294
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
G +LT G + GQLGR ++ L P+ R +VF Y T + +
Sbjct: 295 NGAILTLGDGQLGQLGRKNVYRSNTLGEESGEHLIVRRCPVAR----NVFVDGYWTIVHA 350
Query: 250 K-GSILAFGLNNYSQLG----EADSEV--QKSGNTCFFTPH-LIKSLSDKKFT----MLA 297
+ G FG+N+Y+QLG E+D+ Q G F P L+ + F +
Sbjct: 351 ENGQYYGFGMNDYAQLGTEINESDARRVEQNIGELHSFKPRALLHPTRAEAFEGDHFVNV 410
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ----DKTITSIACG 352
+G H +ALNS G+++A G++ LGL N E + LQ D + ++
Sbjct: 411 TGIQHVVALNSVGEVFAMGKNINNALGLNNWDRKTGESHWLYDKLQAVEFDSKVVGVSAK 470
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNG---KEDDILNSEGKIYAFGRHDYGRLG 403
S A +G Y WG+ QLG G ++D ++ KI + Y +G
Sbjct: 471 LATSIAWTEDGTAYAWGLDTTGQLGLGLTDEDDKMVGKPAKISSAHHEGYSIIG 524
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 177/440 (40%), Gaps = 76/440 (17%)
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDS 150
C + ALG G + P+ +++ +K +Q+ AG +HS L DG V+ G +
Sbjct: 134 CGEGAALGHPL-GTTTKKPRKIDIFEKEGLNPIQVVAGKNHSAVLTSDGQVFMCGI--NE 190
Query: 151 HGSM---GLKGEG----IQKTPL--KLESVSGIVKIASGADHFVMLTSRGNLLTAG---- 197
GS+ G+K EG K P +++S IV +A+GA + LT++G++ G
Sbjct: 191 KGSVPVGGVKHEGSNDEFTKIPFSEEIKSEGKIVMLAAGASFTIALTNKGSVFGWGDISS 250
Query: 198 CPEQGQLGRITQRSAS------RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
L + R A+R + + GE KH+ + G
Sbjct: 251 VNPSADLDILIARMQENPTIIIHQAKRRVVKIAAGE-----KHL---------ALLDENG 296
Query: 252 SILAFGLNNYSQLGE-----ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+IL G QLG +++ ++SG HLI + G + ++
Sbjct: 297 AILTLGDGQLGQLGRKNVYRSNTLGEESGE------HLIVRRCPVARNVFVDG-YWTIVH 349
Query: 307 NSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQD-KTITSIACGNCVSFAIDSEGV 364
G+ Y FG +DY +LG + N S+ I L K + +F
Sbjct: 350 AENGQYYGFGMNDYAQLGTEINESDARRVEQNIGELHSFKPRALLHPTRAEAFE------ 403
Query: 365 LYGWGMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-PSLQ- 421
G+ + G + + LNS G+++A G++ LGL N E + LQ
Sbjct: 404 ------GDHFVNVTGIQHVVALNSVGEVFAMGKNINNALGLNNWDRKTGESHWLYDKLQA 457
Query: 422 ---DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--KEDDIL--EPMKIEGKQL 474
D + ++ S A +G Y WG+ QLG G EDD + +P KI
Sbjct: 458 VEFDSKVVGVSAKLATSIAWTEDGTAYAWGLDTTGQLGLGLTDEDDKMVGKPAKISSAHH 517
Query: 475 NNYTVLQVASGGQHSVILAK 494
Y+++ + H++ LAK
Sbjct: 518 EGYSIIGASISDCHTLFLAK 537
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4013 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4071 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4123 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 YGKLG-RGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4226
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4227 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4267
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4322
Query: 497 P 497
P
Sbjct: 4323 P 4323
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 124/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG G E+ + P +EG L V+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGD 3180
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3233
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3234 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 153/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 455 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 504
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 546
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 599
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 658
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG G E+ +
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIACGPAQSFA 776
Query: 438 IDS 440
S
Sbjct: 777 WSS 779
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4071 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4125
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4126 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4179 LGRGGSDGSK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4231
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4232 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4286
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4287 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGTRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4113
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4114 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4171 WGD--GDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4229 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4279 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4330
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4331 AQVPMEYNHL 4340
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGTRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +GL E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LG 205
LG
Sbjct: 690 LG 691
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4273
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4274 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 168/356 (47%), Gaps = 52/356 (14%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS HG +GL G E TP +++ + + + A G H ++LT G L T
Sbjct: 3 LYCWGS--TVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG T ++ + F+ L+ + V G+ ++ +++ G + +
Sbjct: 61 GNNDHGQLGHDTNNLPNKRPQ----FISA----LENYIVTQVSCGLSHSLALTNWGQLFS 112
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG V P +IKS++ K ++ G H LAL + G+++A+
Sbjct: 113 WGSNATGQLGHDLDMVSYPA------PRMIKSIATKTVVQISCGHSHCLALTNSGELFAW 166
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G ++YG+LGL + V T + SL I IACG SFA+ G ++GW
Sbjct: 167 GANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW------- 219
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
G++ +G+LGL ++ + PT + +L+ + I+CG+ S
Sbjct: 220 -------------------GKNTFGQLGLNDL-DSRCYPTQLKTLRSLGVRYISCGDDFS 259
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ EG ++ G+G QLG+G ++IL M E L + Q+A G +H++
Sbjct: 260 VFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFE---LMGSKITQIACGRKHTL 312
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 161/342 (47%), Gaps = 33/342 (9%)
Query: 38 VVLTC-GQGDTGQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVCLTEDGKVY 91
+ L C G G+LGLG +E + ++D NV + GG HT+ LT+DGK+Y
Sbjct: 1 MALYCWGSTVHGELGLGG--IEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRD 149
T G ND G LG + PQ ++ + + Q+S G SHS+AL G +++WGS +
Sbjct: 59 TCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGS--N 116
Query: 150 SHGSMGLKGEGIQK-TPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ G +G + + P ++S++ +V+I+ G H + LT+ G L G E GQLG
Sbjct: 117 ATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGL 176
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
T A S +P I + G ++F +S G+I +G N + QLG
Sbjct: 177 GTTGKKVPTATLVKSL---AGIP-----IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D + + C+ P +K+L ++ G S+ L EG ++ G +G+LG
Sbjct: 229 LNDLD-----SRCY--PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGH 281
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLY 366
+ P + L IT IACG + A + S G +Y
Sbjct: 282 GTHGNEIL-PRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G + TCG D GQLG + + K + L+N V +V G H++ LT G+++
Sbjct: 52 TKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLF 111
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG N G LG + + S P+ + K VQIS G SH +AL G ++AWG+ +
Sbjct: 112 SWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGA--N 169
Query: 150 SHGSMGLKGEGIQKTPLK--LESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +GL G +K P ++S++G I IA G +H ++ G + G GQLG
Sbjct: 170 EYGQLGLGTTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228
Query: 206 --------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
TQ R+ G+ ++ G DD ++ F++ +G + G
Sbjct: 229 LNDLDSRCYPTQLKTLRSL--GVRYISCG---------DD-----FSVFLTQEGGVFTCG 272
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIY 313
L + QLG GN P ++ L K T +A G+ H+LA S GK+Y
Sbjct: 273 LGTFGQLGHG-----THGNEIL--PRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 391 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
+Y +G +G LGL + E V P + Q + ACG + + +G LY G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 450 GNGYQLGNGKED-DILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ QLG+ + P I L NY V QV+ G HS+ L
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISA--LENYIVTQVSCGLSHSLAL 104
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 46/382 (12%)
Query: 15 NPSQKVFVTSEAVPTLKCKTGGGVVLTC-GQGDTGQLGLGPDVMERKTFALVEDLD---- 69
N ++K + E + ++ T + C G G+LGLG +E + + +LD
Sbjct: 53 NRNKKRRLACEPIIAVEYSTVTDKNMFCWGSTIHGELGLGG--IEDENILVPRELDFQKA 110
Query: 70 -NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA-EGDSEFIPQTVNLPKKAVQISA 127
+ ++ G +TV +T DG+VY+ G ND G LG E + IP K +++
Sbjct: 111 TEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFK--KVAC 168
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESV--SGIVKIASGADHF 184
G H++A+ E G +++WGS ++ G +GL + I+ P + ++ S +V++A G +H
Sbjct: 169 GAHHTLAVNEWGQLFSWGS--NAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHV 226
Query: 185 VMLTSRGNLLTAGCPEQGQLG-------RITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+ LT+ G L + G GQLG I + S A ++F+ G
Sbjct: 227 LALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCG----------- 275
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G ++ IS G++ +G N + QLG D+ + P +++L + K A
Sbjct: 276 ---GYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRN-------LPRQLQTLQNAKVCYAA 325
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
G+ S+ L +G ++ G YG+LG N S + P + L T+T I+CG +
Sbjct: 326 CGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEIL-PRQVMELMGSTVTQISCGKRHTL 384
Query: 358 A-IDSEGVLYGWGMGNGYQLGN 378
+ S G +Y WG+G QLGN
Sbjct: 385 GLVPSRGRVYAWGLGGAGQLGN 406
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 170/408 (41%), Gaps = 69/408 (16%)
Query: 138 DGTVYAWGSFRDSHGSMGLKG---EGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
D ++ WGS HG +GL G E I L + + I +IA G ++ V++T G +
Sbjct: 75 DKNMFCWGS--TIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGS 252
+ G + GQLG R+ + + PG L V G ++T ++ G
Sbjct: 133 YSCGNNDYGQLGH-------EKGRKRLQLI-PG---LDAFVFKKVACGAHHTLAVNEWGQ 181
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ ++G N QLG S N PH++++L +A G +H LAL + GK+
Sbjct: 182 LFSWGSNAEGQLG------LNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKL 235
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
Y++G + G+LGL + +P I SL I I CG S AI G ++GWG
Sbjct: 236 YSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNT 295
Query: 373 GYQLG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRLGLKN 406
QLG G+E + L +G ++ G YG+LG N
Sbjct: 296 FGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGN 355
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILE 465
S + P + L T+T I+CG + + S G +Y WG+G QLGN +
Sbjct: 356 TSNEIL-PRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVAT 414
Query: 466 PMKIEGKQL-----------------NNYTVLQVASGGQHSVILAKPK 496
P + G + NY V + +GG H P+
Sbjct: 415 PQVVHGPWVAPNGSSVIDFNEFTSCKTNYIVKHIFTGGDHCFATVIPR 462
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 31/311 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVY 91
T G V +CG D GQLG RK L+ LD V +V G HT+ + E G+++
Sbjct: 127 TRDGQVYSCGNNDYGQLGHEKG---RKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLF 183
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG N EG LG ++ E +P V VQ++ G +H +AL +G +Y+WGS +
Sbjct: 184 SWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGS--N 241
Query: 150 SHGSMGLKGEGIQK--TPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
S G +GL G ++ P + S++G I I G H + ++ G + G GQLG
Sbjct: 242 SDGQLGL-GTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLG 300
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
R +RN R + L+ +V + ++ F++ G + G Y QLG
Sbjct: 301 LNDTR--NRNLPRQLQTLQNAKVCYAACGEE------FSVFLTVDGGVFTCGAGMYGQLG 352
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
++ + P + L T ++ G+ H+L L S G++YA+G G+LG
Sbjct: 353 HGNTSNE-------ILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
Query: 325 LKNVSEPVTEP 335
N++ V P
Sbjct: 406 -NNITRSVATP 415
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 166/367 (45%), Gaps = 41/367 (11%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLG-PDVMERKTF 62
K AEN K + ++ L C TG + G+ D GQLGLG + + T
Sbjct: 15 KFAENTPSKFWFKNDIPTFLACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTC 74
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE-----FIPQTVN 117
+ V V G HT+ TE GKVY G N+EG LG GD+E + +
Sbjct: 75 VKALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGL---GDTEDRNTFHLIEFFT 131
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI 177
+ Q+SAG + S AL EDG ++ WG +S G +GL P ++ I I
Sbjct: 132 SQHQFKQLSAGSNTSAALTEDGKLFMWG--ENSEGQIGLNNVCNVYFPHEVTVGKPIAWI 189
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+ G H +T G L T G PE G+LG Q M+ P VP + +
Sbjct: 190 SCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLL--------MNHKVPQLVPGIPEKVIQ 241
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTM 295
V G +T + ++ ++ FGL + QLG G F T P +++S+ D K T
Sbjct: 242 VACGGGHTVVLTEKAVYNFGLGQFGQLG--------LGTFVFETTEPKIMESVKDHKITY 293
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGN 353
++ G++H+ + G++Y FG YG+LGL +N + PT P+ + +ACG
Sbjct: 294 ISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFV-PTLCPNFLRFKVHLVACGG 352
Query: 354 C--VSFA 358
C V FA
Sbjct: 353 CHMVVFA 359
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 156/349 (44%), Gaps = 47/349 (13%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A G +H ++T L G + GQLG ++ + + + L+P +V KH
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPT--CVKALKPEKV----KH-- 85
Query: 237 DVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL-SDKKFT 294
V G +T +S++G + A G NN QLG D+E + T HLI+ S +F
Sbjct: 86 -VACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRN-------TFHLIEFFTSQHQFK 137
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
L++G + S AL +GK++ +G + G++GL NV P K I I+CG
Sbjct: 138 QLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYF---PHEVTVGKPIAWISCGYY 194
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKE--------------------------DDILNSE 388
S + EG LY +G +LG K+ ++ +E
Sbjct: 195 HSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLTE 254
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
+Y FG +G+LGL TEP + S++D IT I+CG + I G +Y +G
Sbjct: 255 KAVYNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFG 314
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
G +LG G E+ + + + V VA GG H V+ A P+P
Sbjct: 315 DGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCHMVVFATPRP 363
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 58/374 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSH 131
+ G HT +T + K+Y +G ND G LG ++ + P V P+K ++ G +H
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKS-AVCKPTCVKALKPEKVKHVACGRNH 92
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE---SVSGIVKIASGADHFVMLT 188
++ E G VYA G ++ G +GL + T +E S ++++G++ LT
Sbjct: 93 TLVSTEGGKVYAVGG--NNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALT 150
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FI 247
G L G +GQ+G N + F P EV + K I + G Y++ F+
Sbjct: 151 EDGKLFMWGENSEGQIGL--------NNVCNVYF--PHEVTVG-KPIAWISCGYYHSAFV 199
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ +G + FG + +LG + K P L+ + +K +A G H++ L
Sbjct: 200 TMEGELYTFGEPEFGKLG-----LPKQLLMNHKVPQLVPGIPEK-VIQVACGGGHTVVL- 252
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+E +Y FG +G+LGL TEP + S++D IT I+CG + I
Sbjct: 253 TEKAVYNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALI-------- 304
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTI 425
DI G++Y FG YG+LGL +N + PT P+ +
Sbjct: 305 --------------TDI----GRMYTFGDGRYGKLGLGMENFTNQFV-PTLCPNFLRFKV 345
Query: 426 TSIACGNC--VSFA 437
+ACG C V FA
Sbjct: 346 HLVACGGCHMVVFA 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
T LA G H+ + K+Y FGR+D+G+LGL + S V +PT + +L+ + + +ACG
Sbjct: 32 TFLACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKS-AVCKPTCVKALKPEKVKHVACGR 90
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------ILN 386
+ G +Y G N QLG G +D L
Sbjct: 91 NHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALT 150
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+GK++ +G + G++GL NV P K I I+CG S + EG LY
Sbjct: 151 EDGKLFMWGENSEGQIGLNNVCNVYF---PHEVTVGKPIAWISCGYYHSAFVTMEGELYT 207
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNN---YTVLQVASGGQHSVILAK 494
+G +LG K+ +L K+ QL V+QVA GG H+V+L +
Sbjct: 208 FGEPEFGKLGLPKQ--LLMNHKV--PQLVPGIPEKVIQVACGGGHTVVLTE 254
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 181/417 (43%), Gaps = 58/417 (13%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV WG ND+ LG +G +P +V K + I+ G + +DG +YA G
Sbjct: 2893 KVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG- 2950
Query: 147 FRDSHGSMGLKGEGIQKTPLKL----ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
++G +GL TP ++ + V V + SG H + LT G + + G E G
Sbjct: 2951 -EGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3009
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG +R +E L+ K + D+ G ++ I+S G + +GL Y
Sbjct: 3010 KLGH-----GNRLTLEKPKLIE----SLRTKRVRDIACGSSHSAAITSSGELYTWGLGEY 3060
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHD 319
+LG D+ Q P L+ +L + +A G +L L EG ++++G D
Sbjct: 3061 GRLGHGDNCTQ-------LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3113
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG + SE + P + L + I CG S A+ G ++ WG G+ Y+LG+G
Sbjct: 3114 FGKLG-RGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3172
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+ + V +PTPI L+ K + +A G A+
Sbjct: 3173 TD---------------------------QHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3205
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G +Y WG + Q G+G +P + G L+ V +VA G HSV + P+
Sbjct: 3206 DSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLG--LDGVFVNRVACGSSHSVAWSLPQ 3260
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 180/417 (43%), Gaps = 66/417 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
++ WG N G LG +G +P + ++L + +QI+ G+ A+ DG +YA G
Sbjct: 3939 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSL-LRPIQIAGGEQTLYAVTPDGKLYATG- 3995
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQG 202
+ + + P +ES+ + V + SG H + L+S G + + G E G
Sbjct: 3996 YGAGGRLGIGGTDSV-SAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4054
Query: 203 QLGRITQRSASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
+LG + S R A G+ ID ++ I+S+G +L +G
Sbjct: 4055 KLGHGNRDSYDRPKLIEALSGIGV------------IDIACGSAHSACITSQGHVLTWGK 4102
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFG 316
Y +LG DSE Q P L+++L + +A SG +L + + ++++G
Sbjct: 4103 GRYGRLGHGDSEDQ-------LQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG 4155
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
DYG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4156 DGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKG----- 4209
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
DY RLG N ++ V P + +LQ K I SIA G+
Sbjct: 4210 ---------------------DYHRLGHGN-TDHVRRPKKVAALQGKKIISIATGSLHCV 4247
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
A G ++ WG + QLG+G I P ++ L +++V G H++ L+
Sbjct: 4248 ACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQS--LQGKHIVKVICGSAHTLALS 4302
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 159/357 (44%), Gaps = 42/357 (11%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
VL G D QLG L ++ T++ V + + G +++DGK+Y G
Sbjct: 2894 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG--- 2950
Query: 98 EGALGREAEGDSEFIPQTVNLP------KKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
EG GR G + +P +P K V + +G H++AL DG V++WG D
Sbjct: 2951 EGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED-- 3008
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--- 206
G +G + P +ES+ + IA G+ H +TS G L T G E G+LG
Sbjct: 3009 GKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3068
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYS 262
TQ L+P V + H + V G + ++ +G + ++G ++
Sbjct: 3069 CTQ-------------LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFG 3115
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG SE C PH ++ L+ + G SLAL G+++ +G+ DY R
Sbjct: 3116 KLGRGGSE------GCS-VPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3168
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LG + V +PTPI L+ K + +A G A+ G +Y WG + Q G+G
Sbjct: 3169 LG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3224
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 181/418 (43%), Gaps = 61/418 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G + G GQLG G D K E L + + + GG T+ +T DGK+Y
Sbjct: 3935 GASTIFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA 3993
Query: 93 WGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
G G DS P V ++ K V +++G H +AL DG V++WG
Sbjct: 3994 TGYGAGGR-LGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGE 4052
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G P +E++SGI + IA G+ H +TS+G++LT G +G+ GR
Sbjct: 4053 D--GKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG---KGRYGR 4107
Query: 207 ITQRSASRNARRGMSFLEPG--EVPLKRKHIDDVF-TGVYNTF-ISSKGSILAFGLNNYS 262
+ + L+P E L + ID +G T I+ ++ ++G +Y
Sbjct: 4108 LGHGDSEDQ-------LQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4160
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S+ K P I+SL+ + G S+AL G +Y +G+ DY R
Sbjct: 4161 KLGRGGSDGCK-------IPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHR 4213
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG N ++ V P + +LQ K I SIA G+ A G ++ WG + QLG
Sbjct: 4214 LGHGN-TDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG----- 4267
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+G + A R P + SLQ K I + CG+ + A+ +
Sbjct: 4268 -----DGTVTAIQR-----------------PRLVQSLQGKHIVKVICGSAHTLALST 4303
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 154/342 (45%), Gaps = 50/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG + R+ L + + V V GG H + LT DGKV++W
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3003
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G ++G LG E +L K V+ I+ G SHS A+ G +Y WG G
Sbjct: 3004 GEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGL-----G 3058
Query: 153 SMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLG 205
G G G T LK + V+ +V++A G+ + LT G + + G + G+LG
Sbjct: 3059 EYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3118
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTFISSKGSILAFG 257
R S VP + + ++ V GV ++ ++ G + +G
Sbjct: 3119 RGGSEGCS--------------VPHQVERLNSV--GVMQIECGAQFSLALTKSGEVWTWG 3162
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P I+ L KK +A G H LA+ G++YA+G
Sbjct: 3163 KGDYYRLGHGTDQHVRK--------PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWG 3214
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G N +P + L + +ACG+ S A
Sbjct: 3215 DNDHGQQGSGNTVVN-KKPNLVLGLDGVFVNRVACGSSHSVA 3255
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 44/288 (15%)
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS 252
+LT G GQ+ + S+ A + LE V H + G + +SS
Sbjct: 537 ILTTG----GQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHCE----GKHVMVLSSANE 588
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ ++G + +LG D+ ++ P +I L +K+ + G +S A+ G++
Sbjct: 589 VWSWGAGDGGRLGHGDTVSKEH-------PTMIVGLHEKQVCGIYCGASYSAAITIAGEL 641
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGM 370
+ +GR YGRLG N + + PT + +L+ + +A G + S + G+L+ WG
Sbjct: 642 FTWGRGTYGRLGHGNSDDKLV-PTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGD 700
Query: 371 GNGYQLGNG---------KEDDILN---------------SEGKIYAFGRHDYGRLGLKN 406
G+ +LGNG + D ++N +G +Y +G+ GRLG N
Sbjct: 701 GDFGKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGN 760
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
SE P + +L+ K I +A G+ A+ S G LYGWG N YQ
Sbjct: 761 -SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGR-NDYQ 806
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALL 136
G H + L+ +V++WG D G LG E V L +K V I G S+S A+
Sbjct: 577 GKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAIT 636
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGN 192
G ++ WG R ++G +G + P +++++ V + SG H + +T G
Sbjct: 637 IAGELFTWG--RGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGL 694
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK---HIDDVFTGV-YNTFIS 248
L G + G+LG + S N +P++ ++ +++G ++ +S
Sbjct: 695 LFAWGDGDFGKLG-----NGSCNG---------SPIPVQIDTLVNVSRIYSGSQFSVALS 740
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G++ +G + +LG +SE P L+++L KK +A G H LAL S
Sbjct: 741 CDGTLYTWGKGHGGRLGHGNSEHSN-------VPKLVRALEGKKIADVAVGSAHCLALTS 793
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPI----PSLQDKTITSIACG 352
G++Y +GR+DY ++ VS +PI P+L+ I+ + CG
Sbjct: 794 SGELYGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLR---ISGMTCG 838
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 110/248 (44%), Gaps = 41/248 (16%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
ISSK +L +GLN+ QLG K P LS K +A G +
Sbjct: 2890 ISSK--VLVWGLNDKEQLGGLKGSKVK-------LPTYSSVLSQLKPIHIAGGSKSLFIV 2940
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGV 364
+ +GK+YA G GRLGL + + V P +P L + +A G + A+ +G
Sbjct: 2941 SQDGKLYACGEGTNGRLGLGH-NNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGK 2999
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
++ WG G +LG+G RL L+ +P I SL+ K
Sbjct: 3000 VFSWGEGEDGKLGHG--------------------NRLTLE-------KPKLIESLRTKR 3032
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
+ IACG+ S AI S G LY WG+G +LG+G L+P + L + V+QVA
Sbjct: 3033 VRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLV--TTLQGHRVVQVAC 3090
Query: 485 GGQHSVIL 492
G + + L
Sbjct: 3091 GSRDAQTL 3098
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 38/221 (17%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H + L+S +++++G D GRLG + PT I L +K + I CG S AI
Sbjct: 579 HVMVLSSANEVWSWGAGDGGRLGHGDTVSK-EHPTMIVGLHEKQVCGIYCGASYSAAITI 637
Query: 362 EGVLYGWGMGNGYQLGNGKEDDIL----------------------------NSEGKIYA 393
G L+ WG G +LG+G DD L G ++A
Sbjct: 638 AGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFA 697
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDK--TITSIACGNCVSFAIDSEGVLYGWGMGN 451
+G D+G+LG + + +PIP D ++ I G+ S A+ +G LY WG G+
Sbjct: 698 WGDGDFGKLGNGSCNG-----SPIPVQIDTLVNVSRIYSGSQFSVALSCDGTLYTWGKGH 752
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G +LG+G + P + + L + VA G H + L
Sbjct: 753 GGRLGHGNSEHSNVPKLV--RALEGKKIADVAVGSAHCLAL 791
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGG--MHTVCLTED 87
C T G VLT G+G G+LG G D ++ LVE L +++ G T+C+T+D
Sbjct: 4090 CITSQGHVLTWGKGRYGRLGHG-DSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDD 4148
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
V++WG D G LGR D IP + +++ G SVAL G+VY WG
Sbjct: 4149 DNVWSWGDGDYGKLGR-GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWG 4207
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ + +G + P K+ ++ G I+ IA+G+ H V + G + T G ++GQ
Sbjct: 4208 --KGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQ 4265
Query: 204 LGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF 246
LG T + R P V L+ KHI V G +T
Sbjct: 4266 LGDGTVTAIQR----------PRLVQSLQGKHIVKVICGSAHTL 4299
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
C T G+V + G GD G+LG G P +ER V+++ G ++ L
Sbjct: 3099 CLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSV------GVMQIECGAQFSLAL 3152
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGT 140
T+ G+V+TWG D LG G + + + + KK + ++ G H +A+ + G
Sbjct: 3153 TKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQ 3209
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFV 185
VYAWG + HG G + K P + + G+ ++A G+ H V
Sbjct: 3210 VYAWGD--NDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSV 3254
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
GK +L+S +++++G D GRLG + PT I L +K + I CG S AI
Sbjct: 577 GKHVMVLSSANEVWSWGAGDGGRLGHGDTVSK-EHPTMIVGLHEKQVCGIYCGASYSAAI 635
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA--SGGQHSV 490
G L+ WG G +LG+G DD L P +++ L +Y V+ VA SG HS+
Sbjct: 636 TIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQA--LKSYKVVDVALGSGDAHSM 687
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGG--MHTVCLTEDGK 89
T G + T G+G G+LG G + ++ V+ L + VV+V +G H++C+T++G
Sbjct: 636 TIAGELFTWGRGTYGRLGHG-NSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGL 694
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
++ WG D G LG + S IP ++ +I +G SVAL DGT+Y WG +
Sbjct: 695 LFAWGDGDFGKLGNGSCNGSP-IPVQIDTLVNVSRIYSGSQFSVALSCDGTLYTWG--KG 751
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
G +G P + ++ G I +A G+ H + LTS G L
Sbjct: 752 HGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGEL 797
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C T G++ G GD G+LG G ++ L NV + G +V L+ DG +Y
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNG-SCNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGTLY 746
Query: 92 TWGCNDEGALGREAEGDSEF--IPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWG 145
TWG +G GR G+SE +P+ V KK ++ G +H +AL G +Y WG
Sbjct: 747 TWG---KGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V T G+GD +LG G D + R ++ + G +H V ++ G+V+T
Sbjct: 4198 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4257
Query: 93 WGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVAL 135
WG NDEG LG +G I P+ V K V++ G +H++AL
Sbjct: 4258 WGDNDEGQLG---DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 208/506 (41%), Gaps = 121/506 (23%)
Query: 17 SQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT------FALVEDLDN 70
S+ ++++EAV V G GD G+LGLG +E + F L D
Sbjct: 14 SRPRWLSTEAVAGSGEPAWRRVAALWGNGDYGRLGLG--ALESRWNPTACPFFLARAGDP 71
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP-QTVNLPKKAVQISAGD 129
+ GG HT+ LT+ G+V+ G ND G LG + P + +K VQISAG+
Sbjct: 72 PASLACGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISAGN 131
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK---TPLKLESVSG--IVKIASGADHF 184
HS A+ DG ++ WG ++S G +GL G+G+ K TP K++ ++ + +A G++H
Sbjct: 132 HHSCAVTADGELFVWG--KNSSGQLGL-GKGVGKVVSTPRKVDYLADVRVRMVALGSEHS 188
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ +T G L+ G G+LG
Sbjct: 189 IAVTEGGEALSWGAAGAGRLGH-------------------------------------- 210
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
K SIL FG+ SE +TP LIK+L K +A+G HS
Sbjct: 211 ---GHKSSILGFGM--------VSSE---------YTPRLIKNLDGVKIKRIAAGMLHSA 250
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
++ +G ++ FG+ G N PT + +Q +ACG + A+ G
Sbjct: 251 CIDEKGTLFIFGQKTEKVFGRSN---DAPRPTVVEEIQFS--EEVACGGYHTCALTDGGD 305
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS-LQDK 423
LY W G ++ G LGL V+ V P + S L
Sbjct: 306 LYSW--------------------------GSNENGCLGL-GVTGMVRSPEVLRSTLFKL 338
Query: 424 TITSIACGNCVSFAIDSEGVL-YGWGMGNGY----------QLGNGKEDDILEPMKIEGK 472
++ ++CG + I E + +GWG NG QLG+G + D EPM +E
Sbjct: 339 PVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELG 398
Query: 473 QLNNYTVLQVASGGQHSVILAKPKPN 498
+ N + V+ G H+ + + K N
Sbjct: 399 R--NARAVHVSCGFNHTGAIFEYKEN 422
>gi|218295499|ref|ZP_03496312.1| regulator of chromosome condensation RCC1 [Thermus aquaticus
Y51MC23]
gi|218244131|gb|EED10657.1| regulator of chromosome condensation RCC1 [Thermus aquaticus
Y51MC23]
Length = 534
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 174/405 (42%), Gaps = 63/405 (15%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
H + + +DG V+ WG N +G LG ++E P V V+++AG HS+AL DG
Sbjct: 174 HVLYVGKDGTVWAWGLNQDGQLGIGKTSEAEPKPVKVQGLTDVVEVAAGWRHSLALRRDG 233
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
TV+AWG+ + HG +G+ + P + ++ +V I +G D L G L G
Sbjct: 234 TVWAWGN--NDHGQLGITPNPL--VPYPVRGLTDVVAIRAGRDTSYALRRDGTLWAWGSG 289
Query: 200 EQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
G L G R +G+S ++ +P +F + G++ +G
Sbjct: 290 RWGILGVGDFADRPLPTQV-QGLSGIK--ALP------QGIFGDGVAAVLKEDGTVWVWG 340
Query: 258 LNNYSQLGEADSEVQKSGNTCFF------------TPHLIKSLSDKKFTMLASGQHHSLA 305
N + LG +G C + TP ++ L D LA G HH +A
Sbjct: 341 NNTHGLLG--------TGQRCSYWESGWDWGQGQPTPVQVEGLKD--VAQLAVGGHHFVA 390
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L G++ A+G G+ G+ N E T +P L+D + I G +S A+ +G L
Sbjct: 391 LLKTGEVVAWGLSHRGQAGVFN--EYCAAITKVPDLRD--VVRIQAGGIISSALTRDGTL 446
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ WG + +G+++ +G LG+ V P P P D I
Sbjct: 447 WAWGTHTSW-------------DGRVF------FGMLGIGPVRRDWERPVP-PIGMDGVI 486
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
G +FA+ +G ++ WG + Q+GNG + P++++
Sbjct: 487 --FWEGWDTTFAVKGDGTVWAWGRNDYGQIGNGSRESQHTPIQVK 529
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 153/360 (42%), Gaps = 35/360 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G GQLG+G V+ L +VVEV G H++ L DG V+ WG N
Sbjct: 182 GTVWAWGLNQDGQLGIGKTSEAEPKPVKVQGLTDVVEVAAGWRHSLALRRDGTVWAWGNN 241
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG + +P V V I AG S AL DGT++AWGS R G +G+
Sbjct: 242 DHGQLGITP---NPLVPYPVRGLTDVVAIRAGRDTSYALRRDGTLWAWGSGR--WGILGV 296
Query: 157 KGEGIQKTPLKLESVSGIVKIASGA---DHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+ P +++ +SGI + G +L G + G G LG QR +
Sbjct: 297 GDFADRPLPTQVQGLSGIKALPQGIFGDGVAAVLKEDGTVWVWGNNTHGLLG-TGQRCSY 355
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ G + + P++ + + DV G + + G ++A+GL++ Q G +
Sbjct: 356 WES--GWDWGQGQPTPVQVEGLKDVAQLAVGGHHFVALLKTGEVVAWGLSHRGQAGVFNE 413
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD-------YGR 322
+ + K + + +G S AL +G ++A+G H +G
Sbjct: 414 ----------YCAAITKVPDLRDVVRIQAGGIISSALTRDGTLWAWGTHTSWDGRVFFGM 463
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG+ V P P P D I G +FA+ +G ++ WG + Q+GNG +
Sbjct: 464 LGIGPVRRDWERPVP-PIGMDGVI--FWEGWDTTFAVKGDGTVWAWGRNDYGQIGNGSRE 520
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 43/234 (18%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
L+ HH L + +G ++A+G + G+LG+ SE +P + L D + +A G
Sbjct: 168 LSVSLHHVLYVGKDGTVWAWGLNQDGQLGIGKTSEAEPKPVKVQGLTD--VVEVAAGWRH 225
Query: 356 SFAIDSEGVLYGWGMGNGYQLG-----------NGKEDDI-----------LNSEGKIYA 393
S A+ +G ++ WG + QLG G D + L +G ++A
Sbjct: 226 SLALRRDGTVWAWGNNDHGQLGITPNPLVPYPVRGLTDVVAIRAGRDTSYALRRDGTLWA 285
Query: 394 FGRHDYGRLGLKNVSE-PVTEPTPIPSLQD-KTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+G +G LG+ + ++ P+ PT + L K + G+ V+ + +G ++ WG
Sbjct: 286 WGSGRWGILGVGDFADRPL--PTQVQGLSGIKALPQGIFGDGVAAVLKEDGTVWVWGNNT 343
Query: 452 GYQLGNGKEDDILE-----------PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
LG G+ E P+++EG + V Q+A GG H V L K
Sbjct: 344 HGLLGTGQRCSYWESGWDWGQGQPTPVQVEGLK----DVAQLAVGGHHFVALLK 393
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 739 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 797
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 798 EPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 857
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 858 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 916
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 917 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 974
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 975 VAAGSTHCLALTE 987
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4270 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4327
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV D G ++ +++ G + +G Y
Sbjct: 4328 GKLGHGNRSPCDRP--RVIESLRGIEV------ADVAAGGAHSACVTAAGDLYTWGKGRY 4379
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4380 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4432
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4433 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4483
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4484 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4524
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4525 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4579
Query: 497 P 497
P
Sbjct: 4580 P 4580
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 178/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 3221 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3278
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3279 EATNGRLGLGLSS-GTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3337
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3338 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3388
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3389 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3441
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3442 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3493
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3494 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3533
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P + G L + +VA G HSV
Sbjct: 3534 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHG--LEGQKITRVACGSSHSV 3583
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3331
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3332 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3386
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3387 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3446
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3447 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3491
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3492 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3543
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3544 DNDHGQQG-NGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 154/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 716 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 765
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 766 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISTFSG 807
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 808 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 860
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 861 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 919
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 920 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 979
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 980 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIACGPAQSFAW 1037
Query: 439 DS 440
S
Sbjct: 1038 SS 1039
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 3213 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3267
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ V K V + +G H+ AL DG
Sbjct: 3268 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDG 3327
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3328 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3385
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3386 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3432
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3433 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3485
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3486 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3544
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3545 NDHGQQGNG---------------------------TTTVNRKPTLVHGLEGQKITRVAC 3577
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3578 GSSHSVA 3584
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 173/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 4209 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4267
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4268 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4327
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4328 --GKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4382
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4383 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4435
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4436 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4488
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4489 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4543
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4544 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL------P 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 755 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISTFSGKQAG 811
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 812 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 869
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 870 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 918
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 919 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 971
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 972 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIAC 1029
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 1030 GPAQSFAWSS 1039
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E V +V GG H+ C+T G
Sbjct: 4317 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VADVAAGGAHSACVTAAGD 4370
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4371 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4427
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4428 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4485
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4486 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4535
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4536 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4587
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4588 AQVPMEYNHL 4597
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 3219 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3271
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + +T+++ S+ + V G
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTV----PIP----RQVTALS-----SYVVKKVAVHSG-- 3316
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3317 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3366
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3367 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3424
Query: 490 VILA 493
LA
Sbjct: 3425 QTLA 3428
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 882 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 935
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 936 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
S L+ + T L IV IA G
Sbjct: 996 SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 1030
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 828 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 886
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 887 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 943
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 944 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 1002
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 1003 FDTLRVTKP-------------EPTALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 1048
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ TF+ + +VV + G ++ +T +G+
Sbjct: 775 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--STFSGKQAGKHVVHIACGSTYSAAITAEGE 832
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 833 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 891
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 892 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949
Query: 204 LGRITQ 209
LG T+
Sbjct: 950 LGHGTE 955
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4472 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4530
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4531 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 169/355 (47%), Gaps = 43/355 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVME---------RKTFALVEDLDNVV--EVVVGGMHTVCLTED 87
V C GD GQLG PD +E R + + V+ + G HT+ L++D
Sbjct: 8 VFGCA-GD-GQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDD 65
Query: 88 GKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
GKV++ G N G LGR EG P ++ +QISAG SHS+A+ +DG ++AWG
Sbjct: 66 GKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWG 125
Query: 146 SFRDSHGSMGLKGEGI-QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
S +SHG + + G+ + TP ++ S+ V++A GA H V L G + G Q
Sbjct: 126 S--NSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGRVFIWG---QQSD 180
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
GRI A F+ +P+ + ++FT +++ G++ A+G N QL
Sbjct: 181 GRIRHSPAEVEI-----FI---SIPIVQISAGNLFTMA----LTASGTLFAWGKNEEGQL 228
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + N C P++ + G HS+AL EG++++ G +G+LG
Sbjct: 229 G--DFTNKDVVNPC-AVPNI------NSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLG 279
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ I + +T IACG C + + + G ++ +G+ + QLG+G
Sbjct: 280 CGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHG 333
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 179/416 (43%), Gaps = 69/416 (16%)
Query: 89 KVYTWGCNDEGALGR-----EAEGDSEFIPQTV-NLPKK-----AVQISAGDSHSVALLE 137
++Y +GC +G LG E++ +P+ V P + I++G+ H++ L +
Sbjct: 5 QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64
Query: 138 DGTVYAWGS-FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
DG V++ GS + G G++ P+ + S I++I++G H + ++ G L
Sbjct: 65 DGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAW 124
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G GQL AS +R S E +V H + G G + +
Sbjct: 125 GSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGG---------GRVFIW 175
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + ++ + +EV+ F + +++ +++G ++AL + G ++A+G
Sbjct: 176 GQQSDGRIRHSPAEVE-----IFISIPIVQ---------ISAGNLFTMALTASGTLFAWG 221
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+++ G+LG ++ V P +P++ ++ ++ CG+ S A
Sbjct: 222 KNEEGQLG-DFTNKDVVNPCAVPNI--NSVVAVECGDSHSIA------------------ 260
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
L EG++++ G +G+LG + I + +T IACG C +
Sbjct: 261 --------LTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTI 312
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ + G ++ +G+ + QLG+G + + P I+ + V V +G S L
Sbjct: 313 VV-ANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVE----NVASVFAGWDQSFCL 363
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 153/329 (46%), Gaps = 37/329 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL----VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG G+LG G + ++ + + +++++ G H++ +++DG+++
Sbjct: 66 GKVWSCGSNYNGELGRGG--VREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFA 123
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N G L + + P+ V + VQ++ G SH+V+L G V+ WG D
Sbjct: 124 WGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGRVFIWGQQSDGR- 182
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
I+ +P ++E IV+I++G + LT+ G L G E+GQLG T +
Sbjct: 183 --------IRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNK 234
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ P VP + ++ ++ +G + + G +++ QLG +
Sbjct: 235 DV----------VNPCAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG--Q 282
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+S N ++ S T +A G+ H++ + + GK++ FG + G+LG N
Sbjct: 283 PNRSQNCMRGITEMLGS----HVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRN 337
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+T P I S+++ + S+ G SF +
Sbjct: 338 QIT-PRVIDSVEN--VASVFAGWDQSFCL 363
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 54/324 (16%)
Query: 174 IVK-IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
IVK IASG H + L+ G + + G G+LGR R G + P +
Sbjct: 48 IVKSIASGERHTLFLSDDGKVWSCGSNYNGELGR-------GGVREGSYTIYPVHISSTV 100
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
I ++ +S G + A+G N++ QL + + TP + SL +
Sbjct: 101 SIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASD------TPKRVPSLPET- 153
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A G H+++LN G+++ +G+ GR+ P + I I+ G
Sbjct: 154 -VQVACGASHTVSLNGGGRVFIWGQQSDGRIR--------HSPAEVEIFISIPIVQISAG 204
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
N + A+ + G L+ WG N EG++ F D V
Sbjct: 205 NLFTMALTASGTLFAWGK---------------NEEGQLGDFTNKD------------VV 237
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P +P++ ++ ++ CG+ S A+ EG ++ G + QLG G+ + M+ +
Sbjct: 238 NPCAVPNI--NSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITE 295
Query: 473 QLNNYTVLQVASGGQHSVILAKPK 496
L ++ V ++A G H++++A K
Sbjct: 296 MLGSH-VTRIACGRCHTIVVANGK 318
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG GQLG G P+ + + E L +V + G HT+ + +GK++
Sbjct: 262 THEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMH 320
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
T+G N G LG ++ P+ ++ + + AG S L
Sbjct: 321 TFGLNSNGQLG-HGNTRNQITPRVIDSVENVASVFAGWDQSFCL 363
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 2260 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 2318
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 2319 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2376
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG ++ R R + L EV +D G ++ +++ G + +G Y
Sbjct: 2377 GKLGHGSRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 2428
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 2429 GRLGHSDSEDQ-------LKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGD 2481
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 2482 YGKLG-RGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKG-------- 2532
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K +IA G+
Sbjct: 2533 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCT 2573
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 2574 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 2628
Query: 497 P 497
P
Sbjct: 2629 P 2629
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 161/375 (42%), Gaps = 54/375 (14%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA-- 178
VQ++ G A+ +G VYA G + +GL G P ++ ++S V K+A
Sbjct: 1300 VQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSS-GTVPLPRQVTALSSYVVKKVAVH 1358
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
SG H LT G + + G + G+LG ++ + + +E LK K I D+
Sbjct: 1359 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDI 1409
Query: 239 FTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G ++ ++S G + +GL Y +LG D+ T P ++K L + +A
Sbjct: 1410 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDT-------TTQLKPKMVKVLLGHRVVQVA 1462
Query: 298 SGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
G +LAL EG ++++G D+G+LG + SE P I L + + I CG
Sbjct: 1463 CGSRDAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQF 1521
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S A+ GV++ WG G DY RLG V +P
Sbjct: 1522 SLALTKSGVVWTWGKG--------------------------DYFRLG-HGSDVHVRKPQ 1554
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
+ L+ K I +A G A+ G +Y WG + Q GNG +P ++G L
Sbjct: 1555 VVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LE 1612
Query: 476 NYTVLQVASGGQHSV 490
+ +VA G HSV
Sbjct: 1613 GQKITRVACGSSHSV 1627
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 1316 GKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 1375
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 1376 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG-----L 1430
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V +V++A G+ + LT G + + G + G+L
Sbjct: 1431 GEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 1490
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 1491 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 1535
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 1536 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 1587
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 1588 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LGRI A + SF E L ++ V G + F ++ +G + A G
Sbjct: 1272 LGRIRAEEEDLAAIKVPSFSET----LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNG 1327
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDY 320
+LG S SG P + +LS +A SG H+ AL +GK++++G D
Sbjct: 1328 RLGLGLS----SGTVPL--PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 1381
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG- 379
G+LG + +P I +L+ K I IACG+ S A+ S G LY WG+G +LG+G
Sbjct: 1382 GKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1440
Query: 380 ---------------------------KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
+ L EG ++++G D+G+LG + SE
Sbjct: 1441 TTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCN 1499
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P I L + + I CG S A+ GV++ WG G+ ++LG+G + + +P +EG
Sbjct: 1500 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG- 1558
Query: 473 QLNNYTVLQVASGGQHSV 490
L ++ VA G H +
Sbjct: 1559 -LRGKKIVHVAVGALHCL 1575
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 172/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 2258 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 2316
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 2317 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2376
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 2377 --GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 2431
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + + G ++ ++ ++G +Y +
Sbjct: 2432 GHSDSEDQ-------LKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2484
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 2485 LGRGGSDGCK-------VPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRL 2537
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K +IA G+ +G +Y WG + QLG+G +
Sbjct: 2538 G-HGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNA 2596
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
I P + +LQ K + +ACG+ + A
Sbjct: 2597 I---------------------------QRPRLVAALQGKKVNRVACGSAHTLA 2623
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 2366 GEVYSWGEAEDGKLGHGSRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 2419
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 2420 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWS 2476
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+V++ G+ V LT G + T G +
Sbjct: 2477 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDY 2534
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + TG ++ + G + +G N
Sbjct: 2535 HRLG----HGSDDHVRR------PRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDN 2584
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 2585 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 2636
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 2637 AQVPMEYNHL 2646
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P Q ++S V + +GG G V + G+GD G+LG M L+E
Sbjct: 1341 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIE 1399
Query: 67 DL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKA 122
L + ++ G H+ LT G++YTWG + G LG + ++ P+ V L +
Sbjct: 1400 ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDTTTQLKPKMVKVLLGHRV 1458
Query: 123 VQISAG--DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
VQ++ G D+ ++AL ++G V++WG G +G G P +E ++ G+ +I
Sbjct: 1459 VQVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIE 1516
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
GA + LT G + T G + +LG + + +P V L+ K I
Sbjct: 1517 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSD----------VHVRKPQVVEGLRGKKIVH 1566
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G + ++ G + A+G N++ Q G + V + P L++ L +K T +
Sbjct: 1567 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-------PTLVQGLEGQKITRV 1619
Query: 297 ASGQHHSLALNS 308
A G HS+A +
Sbjct: 1620 ACGSSHSVAWTT 1631
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P ++LS +A G A+ EGK+YA G GRLGL S V P + +
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTA 1346
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
L + +A + G+ L +GK++++G D G
Sbjct: 1347 LSSYVVKKVAVHS------------------------GGRHATALTVDGKVFSWGEGDDG 1382
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+LG + +P I +L+ K I IACG+ S A+ S G LY WG+G +LG+G
Sbjct: 1383 KLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDT 1441
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
L+P + K L + V+QVA G + + LA
Sbjct: 1442 TTQLKPKMV--KVLLGHRVVQVACGSRDAQTLA 1472
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L + + G +H VC TEDG+VY
Sbjct: 2521 TKAGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKAIAIATGSLHCVCCTEDGEVY 2579
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 2580 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 2623
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 187/397 (47%), Gaps = 50/397 (12%)
Query: 3 HLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTC-GQGDTGQLGLGPDVMERKT 61
H+ K L ++ N ++K + E V ++ + C G G+LGLG +E +
Sbjct: 12 HIRKYTLFRRNANWNKKRRLACEPVIEVQKSLLKKEDMFCWGNTRHGELGLGG--IEDEI 69
Query: 62 FALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF---IP 113
+ ++D + ++ G +TV +T DGK+Y+ G ND G LG E +G +
Sbjct: 70 ILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHE-QGRKRLQLILG 128
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
+ KKA + G H++A+ E G +++WGS +S G +GL + + ++ G
Sbjct: 129 LDAFVFKKA---ACGAYHTIAVNEWGQLFSWGS--NSEGQLGLNSKNFMECSPRMVKTLG 183
Query: 174 ---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-----RITQRSASRNARRG--MSFL 223
IV+IA G H + LT+ G L + G +GQLG R + N G ++F+
Sbjct: 184 TSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFI 243
Query: 224 EPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
G G ++ IS G+I +G N + QLG D++ + P+
Sbjct: 244 ACG--------------GYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRN-------LPY 282
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+++L + K A G+ S+ L +G ++ G YG+LG + + + P + L
Sbjct: 283 QLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMG 341
Query: 344 KTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
T+T I+CG + A + S+G +Y WG+G QLGN
Sbjct: 342 STVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNN 378
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 178/405 (43%), Gaps = 70/405 (17%)
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKG--EGIQKTPLKLE--SVSGIVKIASGADHFVMLTS 189
+LL+ ++ WG+ R HG +GL G + I P +++ S I +IA G ++ V++T
Sbjct: 42 SLLKKEDMFCWGNTR--HGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITH 99
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-IS 248
G + + G + GQLG R+ + + + + +K G Y+T ++
Sbjct: 100 DGKIYSCGNNDYGQLGH-------EQGRKRLQLILGLDAFVFKK----AACGAYHTIAVN 148
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + ++G N+ QLG S N +P ++K+L +A G H+LAL +
Sbjct: 149 EWGQLFSWGSNSEGQLG------LNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTN 202
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G++Y++G + G+LGL +P I +L I IACG S AI G ++GW
Sbjct: 203 NGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 262
Query: 369 GMGNGYQLG-------------------------NGKEDDI-LNSEGKIYAFGRHDYGRL 402
G QLG G+E + L +G ++ G YG+L
Sbjct: 263 GKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 322
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKED 461
G + + + P + L T+T I+CG + A + S+G +Y WG+G QLGN
Sbjct: 323 GHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTR 381
Query: 462 DILEPMKIEG--------------KQLNN----YTVLQVASGGQH 488
P + G KQ ++ Y V + +GG H
Sbjct: 382 STTTPQVVRGPWVAPNGSSMMDFDKQFSSCTVGYVVKHIFTGGDH 426
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 142/310 (45%), Gaps = 29/310 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVY 91
T G + +CG D GQLG RK L+ LD V + G HT+ + E G+++
Sbjct: 98 THDGKIYSCGNNDYGQLG---HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLF 154
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG N EG LG ++ E P+ V VQI+ G H++AL +G +Y+WGS +
Sbjct: 155 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGS--N 212
Query: 150 SHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
S G +GL + + P + +++G I IA G H + ++ G + G GQLG
Sbjct: 213 SEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLG- 271
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ +RN + L +V + ++ F++ G + G Y QLG
Sbjct: 272 -LNDTQNRNLPYQLQTLRNAKVCYAACGEE------FSVFLTVDGGVFTCGAGMYGQLGH 324
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGL 325
N P + L T ++ G+ H+LAL S+G++YA+G G+LG
Sbjct: 325 G-------SNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG- 376
Query: 326 KNVSEPVTEP 335
N + T P
Sbjct: 377 NNSTRSTTTP 386
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 113/273 (41%), Gaps = 39/273 (14%)
Query: 223 LEPGEVPLKR-KHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P EV K+ I + G Y I+ G I + G N+Y QLG +
Sbjct: 71 LVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRL------- 123
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
LI L F A G +H++A+N G+++++G + G+LGL + + P + +
Sbjct: 124 --QLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKT 181
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
L I IACG + A+ + G LY WG NSEG+
Sbjct: 182 LGTSIIVQIACGMKHALALTNNGELYSWGS---------------NSEGQ---------- 216
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
LGL +P I +L I IACG S AI G ++GWG QLG
Sbjct: 217 -LGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDT 275
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ P +++ L N V A G + SV L
Sbjct: 276 QNRNLPYQLQ--TLRNAKVCYAACGEEFSVFLT 306
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 36/202 (17%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G+++++ + +GKIY+ G +DYG+LG + + + I L ACG
Sbjct: 87 IACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQ---LILGLDAFVFKKAACGAYH 143
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
+ A++ G L+ WG + QLG LNS KN E P
Sbjct: 144 TIAVNEWGQLFSWGSNSEGQLG-------LNS-----------------KNFME--CSPR 177
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
+ +L I IACG + A+ + G LY WG + QLG G DI MK K +N
Sbjct: 178 MVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGV--DIRCEMK--PKLIN 233
Query: 476 NYT---VLQVASGGQHSVILAK 494
+ +A GG HS+ ++K
Sbjct: 234 TLAGVPIAFIACGGYHSIAISK 255
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 179/425 (42%), Gaps = 70/425 (16%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4017 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4074
Query: 202 GQLGRITQRSASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
G+LG + R + RG+ +D G ++ +++ G + +G
Sbjct: 4075 GKLGHGNRSPCDRPRVIESLRGIEL------------VDVAAGGAHSACVTAAGDLYTWG 4122
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAF 315
Y +LG +DSE Q P L+++L + +A SG +L L + ++++
Sbjct: 4123 KGRYGRLGHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSW 4175
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G DYG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 GDGDYGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---- 4230
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
DY RLG + V P + LQ K + +IA G+
Sbjct: 4231 ----------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4267
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM---KIEGKQLNNYTVLQVASGGQHSVIL 492
+G +Y WG + QLG+G + I P ++GK++N +VA G H++
Sbjct: 4268 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVN-----RVACGSAHTLAW 4322
Query: 493 AKPKP 497
+ KP
Sbjct: 4323 STSKP 4327
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 161/375 (42%), Gaps = 54/375 (14%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA-- 178
VQ++ G A+ +G VYA G + +G+ G P ++ ++S V K+A
Sbjct: 2999 VQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISS-GTVPIPRQVTALSSYVVKKVAVH 3057
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
SG H LT G + + G + G+LG ++ + + +E LK K I D+
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDI 3108
Query: 239 FTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G ++ ++S G + +GL Y +LG D NT P ++K L + +A
Sbjct: 3109 ACGSSHSAALTSSGELYTWGLGEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVA 3161
Query: 298 SGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
G +LAL EG ++++G D+G+LG + SE P I L + + I CG
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQF 3220
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S A+ GV++ WG G DY RLG V +P
Sbjct: 3221 SLALTKSGVVWTWGKG--------------------------DYFRLG-HGSDVHVRKPQ 3253
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
+ L+ K I +A G A+ G +Y WG + Q GNG +P ++G L
Sbjct: 3254 VVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LE 3311
Query: 476 NYTVLQVASGGQHSV 490
+ +VA G HSV
Sbjct: 3312 GQKITRVACGSSHSV 3326
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3074
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3129
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3190 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3234
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3235 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3286
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3287 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 154/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------VPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP+ +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 175/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3956 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4014
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4015 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4074
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4075 --GKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4129
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 4130 GHSDSEDQ-------LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4182
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4183 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4235
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4236 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4290
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P +P+LQ K + +ACG+ + A
Sbjct: 4291 -----------------------TTNAIQRPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP+ +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPSALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 47/290 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E +V+V GG H+ C+T G
Sbjct: 4064 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----LVDVAAGGAHSACVTAAGD 4117
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V ++ +GD+ ++ L +D TV++
Sbjct: 4118 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4174
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4175 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4232
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4233 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4282
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ QLG+ + +Q+ P L+ +L KK +A G H+LA ++
Sbjct: 4283 DEGQLGDGTTNAIQR--------PRLVPALQGKKVNRVACGSAHTLAWST 4324
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 40/312 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P Q ++S V + +GG G V + G+GD G+LG M L+E
Sbjct: 3040 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIE 3098
Query: 67 DL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKA 122
L + ++ G H+ LT G++YTWG + G LG + ++ P+ V L +
Sbjct: 3099 ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRV 3157
Query: 123 VQISAG--DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+Q++ G D+ ++AL ++G V++WG G +G G P +E ++ G+ +I
Sbjct: 3158 IQVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIE 3215
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
GA + LT G + T G + +LG + + R+ P V L+ K I
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLG----HGSDVHVRK------PQVVEGLRGKKIVH 3265
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G + ++ G + A+G N++ Q G + V + P L++ L +K T +
Sbjct: 3266 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK-------PTLVQGLEGQKITRV 3318
Query: 297 ASGQHHSLALNS 308
A G HS+A +
Sbjct: 3319 ACGSSHSVAWTT 3330
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P ++LS +A G A+ EGK+YA G GRLGL S V PIP
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV----PIP- 3040
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
+ +T+++ S+ + V G G+ L +GK++++G D G
Sbjct: 3041 ---RQVTALS-----SYVVKKVAVHSG-----------GRHATALTVDGKVFSWGEGDDG 3081
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+LG + +P I +L+ K I IACG+ S A+ S G LY WG+G +LG+G
Sbjct: 3082 KLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3140
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
L+P + K L + V+QVA G + + LA
Sbjct: 3141 TTQLKPKMV--KVLLGHRVIQVACGSRDAQTLA 3171
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAVPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPSALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4219 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4277
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I + +P KK +++ G +H++A
Sbjct: 4278 TWGDNDEGQLG---DGTTNAIQRPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E +P V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 30/312 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAG 128
V V G HT+ L DGKV++ G N G LGR EG P ++ + +QISAG
Sbjct: 49 VKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAG 108
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVML 187
SHS+A+ +DG ++AWGS +SHG + + G+ I TP ++ S+ V++A GA H V L
Sbjct: 109 RSHSMAVSDDGRLFAWGS--NSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSL 166
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
G + G Q GRI A F+ VP+ + ++FT +
Sbjct: 167 NGGGRVFIWG---QQSDGRIRHSPAEVEL-----FV---SVPIIQISAGNLFTMA----L 211
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
++ G++ A+G N QLG N P + +++ ++ G HS+AL
Sbjct: 212 TASGTLFAWGRNEEGQLGNFT-------NRDVINPREVPNIN--SVVVVECGDSHSIALT 262
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
EG++++ G +G+LG S I + +T IACG C + + + G ++
Sbjct: 263 HEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHT 321
Query: 368 WGMGNGYQLGNG 379
+G+ + QLG+G
Sbjct: 322 FGLNSNGQLGHG 333
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 157/336 (46%), Gaps = 51/336 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL----VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG G+LG G ++ ++ + + + ++++ G H++ +++DG+++
Sbjct: 66 GKVWSCGSNYNGELGRGG--VKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFA 123
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N G L + P+ V + VQ++ G SH+V+L G V+ WG D
Sbjct: 124 WGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGRVFIWGQQSDGR- 182
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
I+ +P ++E I++I++G + LT+ G L G E+GQLG T R
Sbjct: 183 --------IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNR 234
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLG- 265
+ P EVP +I+ V ++ ++ +G + + G +++ QLG
Sbjct: 235 DV----------INPREVP----NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGC 280
Query: 266 --EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ S+ G T H+ T +A G+ H++ + + GK++ FG + G+L
Sbjct: 281 GQPSRSQNCMRGITEMLGSHV---------TRIACGRCHTIVV-ANGKMHTFGLNSNGQL 330
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
G N +T P I S+++ + S+ G SF +
Sbjct: 331 GHGNTRNQIT-PRMIDSVEN--VASVFAGWDQSFCL 363
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 54/341 (15%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+ASG H + L + G + + G G+LGR + G + P + + I
Sbjct: 52 VASGEKHTLFLANDGKVWSCGSNYNGELGR-------GGVKEGSYTIYPVHISNAVRIIQ 104
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTM 295
++ +S G + A+G N++ QL SG+ TP + SL +
Sbjct: 105 ISAGRSHSMAVSDDGRLFAWGSNSHGQLA-------MSGDILISDTPKRVPSLPET--VQ 155
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G H+++LN G+++ +G+ GR+ P + I I+ GN
Sbjct: 156 VACGASHTVSLNGGGRVFIWGQQSDGRIR--------HSPAEVELFVSVPIIQISAGNLF 207
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILN------------------------SEGKI 391
+ A+ + G L+ WG QLGN D++N EG++
Sbjct: 208 TMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGRV 267
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
++ G +G+LG S I + +T IACG C + + + G ++ +G+ +
Sbjct: 268 FSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNS 326
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G + + P I+ + V V +G S L
Sbjct: 327 NGQLGHGNTRNQITPRMIDSVE----NVASVFAGWDQSFCL 363
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG GQLG G P + + E L +V + G HT+ + +GK++
Sbjct: 262 THEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMH 320
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
T+G N G LG ++ P+ ++ + + AG S L
Sbjct: 321 TFGLNSNGQLG-HGNTRNQITPRMIDSVENVASVFAGWDQSFCL 363
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 30/312 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAG 128
V V G HT+ L DGKV++ G N G LGR EG P ++ + +QISAG
Sbjct: 49 VKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAG 108
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGIVKIASGADHFVML 187
SHS+A+ +DG ++AWGS +SHG + + G+ I TP ++ S+ V++A GA H V L
Sbjct: 109 RSHSMAVSDDGRLFAWGS--NSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSL 166
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
G + G Q GRI A F+ VP+ + ++FT +
Sbjct: 167 NGGGRVFIWG---QQSDGRIRHSPAEVEL-----FV---SVPIIQISAGNLFTMA----L 211
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
++ G++ A+G N QLG N P + +++ ++ G HS+AL
Sbjct: 212 TASGTLFAWGRNEEGQLGNFT-------NRDVINPREVPNIN--SVVVVECGDSHSIALT 262
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
EG++++ G +G+LG S I + +T IACG C + + + G ++
Sbjct: 263 HEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHT 321
Query: 368 WGMGNGYQLGNG 379
+G+ + QLG+G
Sbjct: 322 FGLNSNGQLGHG 333
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 157/336 (46%), Gaps = 51/336 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL----VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG G+LG G ++ ++ + + + ++++ G H++ +++DG+++
Sbjct: 66 GKVWSCGSNYNGELGRGG--VKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFA 123
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N G L + P+ V + VQ++ G SH+V+L G V+ WG D
Sbjct: 124 WGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGRVFIWGQQSDGR- 182
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
I+ +P ++E I++I++G + LT+ G L G E+GQLG T R
Sbjct: 183 --------IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNR 234
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLG- 265
+ P EVP +I+ V ++ ++ +G + + G +++ QLG
Sbjct: 235 DV----------INPREVP----NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGC 280
Query: 266 --EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ S+ G T H+ T +A G+ H++ + + GK++ FG + G+L
Sbjct: 281 GQPSRSQNCMRGITEMLGSHV---------TRIACGRCHTIVV-ANGKMHTFGLNSNGQL 330
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
G N +T P I S+++ + S+ G SF +
Sbjct: 331 GHGNTRNQIT-PRMIDSVEN--VASVFAGWDQSFCL 363
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 54/341 (15%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+ASG H + L + G + + G G+LGR + G + P + + I
Sbjct: 52 VASGEKHTLFLANDGKVWSCGSNYNGELGR-------GGVKEGSYTIYPVHISNAVRIIQ 104
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTM 295
++ +S G + A+G N++ QL SG+ TP + SL +
Sbjct: 105 ISAGRSHSMAVSDDGRLFAWGSNSHGQLA-------MSGDILISDTPKRVPSLPET--VQ 155
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G H+++LN G+++ +G+ GR+ P + I I+ GN
Sbjct: 156 VACGASHTVSLNGGGRVFIWGQQSDGRIR--------HSPAEVELFVSVPIIQISAGNLF 207
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILN------------------------SEGKI 391
+ A+ + G L+ WG QLGN D++N EG++
Sbjct: 208 TMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGRV 267
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
++ G +G+LG S I + +T IACG C + + + G ++ +G+ +
Sbjct: 268 FSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNS 326
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G + + P I+ + V V +G S L
Sbjct: 327 NGQLGHGNTRNQITPRMIDSVE----NVASVFAGWDQSFCL 363
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG GQLG G P + + E L +V + G HT+ + +GK++
Sbjct: 262 THEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMH 320
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
T+G N G LG ++ P+ ++ + + AG S L
Sbjct: 321 TFGLNSNGQLG-HGNTRNQITPRMIDSVENVASVFAGWDQSFCL 363
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 26/324 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVME---RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V TCG D+GQ G+G R ALV + + G H ++ G +YT+
Sbjct: 63 GDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTF 122
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G N G LG + + +L V+++ H++ + +GT+YA+G R+ G
Sbjct: 123 GFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFG--RNDLG 180
Query: 153 SMGLKGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G+ +G+ + PL + ++ +A G H V+ + G ++ G + GQLG T
Sbjct: 181 QLGID-DGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLG--TG 237
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ +A + PL + + G Y+T ++ GS+ +FG N+Y QLG
Sbjct: 238 YTLDYHASPSLL-----AAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGH 292
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
P LIK+L+ + G +H+L L+ +GK+Y FGR+++G+LGL N+
Sbjct: 293 RHHLSE-------PTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNL 345
Query: 329 SEPVTEPTPIPSLQDKTITSIACG 352
+ T P I SL+DK + +A G
Sbjct: 346 ID-CTSPQIIASLRDKFVVKVASG 368
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 152/361 (42%), Gaps = 45/361 (12%)
Query: 164 TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
TP+ I+ +A G + L G++ T G + GQ G I S ++ R L
Sbjct: 36 TPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCG-IGSTSRVQSLR-----L 89
Query: 224 EPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
P V HI + T IS G++ FG N+ QLG + TP
Sbjct: 90 VPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGSTNP-------ITTPT 142
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
IK L+ +A H++ + EG +YAFGR+D G+LG+ + + P P+
Sbjct: 143 KIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHV-PVPLTYFNS 201
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------- 384
+ + ++ACG + + G + +G + QLG G D
Sbjct: 202 RPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSL 261
Query: 385 ---------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
L G +Y+FGR+DYG+LG + ++EPT I +L + CG +
Sbjct: 262 ACGYYHTIALAEHGSVYSFGRNDYGQLGHGH-RHHLSEPTLIKALAKTHAVQVTCGCYHT 320
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+ +G +Y +G N QLG G D P I L + V++VASG HS+ L
Sbjct: 321 LVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQII--ASLRDKFVVKVASGFYHSICLTAT 378
Query: 496 K 496
K
Sbjct: 379 K 379
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 203/470 (43%), Gaps = 71/470 (15%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGCNDEGA 100
GQ G+L D ++R + NV ++V G T L E G V+T G ND G
Sbjct: 17 GQNSYGEL-CHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQ 75
Query: 101 LGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G + + +P V ++ + G H A+ G +Y +G +S G +G
Sbjct: 76 CGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGF--NSRGQLGHG 133
Query: 158 GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
TP K++ ++ +V++A H +++T G L G + GQLG
Sbjct: 134 STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLG---------- 183
Query: 216 ARRGMSFLEPGEVPL---KRKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEV 271
GM P VPL + + V G ++T +S + G ++AFG N++ QLG +
Sbjct: 184 IDDGMDRHVP--VPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLD 241
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
+ + P L LA G +H++AL G +Y+FGR+DYG+LG +
Sbjct: 242 YHASPSLLAAP-----LDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGH-RHH 295
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
++EPT I +L + CG + + +G K+
Sbjct: 296 LSEPTLIKALAKTHAVQVTCGCYHTLVLSEDG--------------------------KV 329
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
Y FGR+++G+LGL N+ + T P I SL+DK + +A G S + + G M
Sbjct: 330 YPFGRNNHGQLGLGNLID-CTSPQIIASLRDKFVVKVASGFYHSICLTATKNSVGSRMDT 388
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ---HS-VILAKPKP 497
+ L + PM+ + ++ V SG Q HS V++A+ +P
Sbjct: 389 SHTLCQDLGKLVNNPMRSD--------LVFVLSGVQIHAHSCVVMARCEP 430
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVED-LDNVV--EVVVGGMHTVCLTEDGKV 90
T GGVV G+ D GQLG G + + +L+ LD++V + G HT+ L E G V
Sbjct: 219 TNGGVV-AFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSV 277
Query: 91 YTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
Y++G ND G LG R + I AVQ++ G H++ L EDG VY +G
Sbjct: 278 YSFGRNDYGQLGHGHRHHLSEPTLIKALAK--THAVQVTCGCYHTLVLSEDGKVYPFG-- 333
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGN 192
R++HG +GL +P + S+ +VK+ASG H + LT+ N
Sbjct: 334 RNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICLTATKN 380
>gi|39996353|ref|NP_952304.1| lipoprotein [Geobacter sulfurreducens PCA]
gi|39983233|gb|AAR34627.1| ATS1 domain repeat protein [Geobacter sulfurreducens PCA]
Length = 2082
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 204/490 (41%), Gaps = 64/490 (13%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVED-LDN--VVEVVVGGMHTVCLTEDGKVY 91
G G + + G G+LG G V + +V D L N V V GG H + L DG ++
Sbjct: 152 GDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLW 211
Query: 92 TWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS--FR 148
WG N G LG G P + + ISAG+ HSVAL DG++++WG F
Sbjct: 212 AWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFG 271
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+ + L G + TP ++ + S V IA+GA H V L G + G QG +G T
Sbjct: 272 ELGNGVALPGANV-TTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
A R L V L TGV + ++ G++ +G N QLG
Sbjct: 331 V------ANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLA-NGTVFGWGGNGAGQLGN-- 381
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
G T + S + + G SL L S G ++A+G + G+LG
Sbjct: 382 ------GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLG-DGT 434
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE------- 381
+ P P P+ T+ A G S A+ ++G L+ WG + QLG G
Sbjct: 435 TTPSAIPVPVVGGAGNWRTT-ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQ 493
Query: 382 -----------DDI------------LNSEGKIYAFGRHDYGRLG----LKNVSEPVTEP 414
+D L ++G ++++G + +G+LG N + PV
Sbjct: 494 QITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIV 553
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
T P D+ ++A G S A+ ++G ++ WG + QL G + +L P Q
Sbjct: 554 TGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQL--GTDPAMLTPA----TQR 607
Query: 475 NNYTVLQVAS 484
N L VAS
Sbjct: 608 NVPAQLAVAS 617
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 199/486 (40%), Gaps = 90/486 (18%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ---ISAG 128
V + G +HTV L +G V WG N +GA+G + P + P V I+AG
Sbjct: 297 VAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRS-TPTLIVAPVTLVNNVAIAAG 355
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES-VSGIVKIASGADHFVML 187
S ++L +GTV+ WG + G +G G P L + S + + G + L
Sbjct: 356 TGVSFSVLANGTVFGWGG--NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGL 413
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK----RKHIDDVFTG-V 242
S G L G GQLG T P +P+ + TG
Sbjct: 414 RSNGTLWAWGGNASGQLGDGTT--------------TPSAIPVPVVGGAGNWRTTATGTA 459
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK----SLSDKKFTMLAS 298
++ + + G++ A+G N+ QLG S V S TP I + + +T +A
Sbjct: 460 HSVAVRADGTLWAWGDNSSGQLGIG-STVAAS------TPQQITVTNPASAGNDWTAVAG 512
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLG----LKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
G HSL L ++G ++++G + +G+LG N + PV T P D+ ++A G
Sbjct: 513 GGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGV 572
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGN------------------------------------ 378
S A+ ++G ++ WG + QLG
Sbjct: 573 FSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAA 632
Query: 379 GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G++ + L ++G ++A+G + G+LG V+ P + + + S+A G S A
Sbjct: 633 GQDHGLSLQADGTLWAWGANSVGQLG-NGVTTATFTPVQVINAEGVPYVSLAAGTSHSLA 691
Query: 438 IDSEGVLYGWGMGNGYQLGNGK---EDDIL--EPMKIEGKQLNNYTV------LQVASGG 486
S+G L+ WG QLG G + D L +P + + L + V L +GG
Sbjct: 692 GRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGG 751
Query: 487 QHSVIL 492
HS L
Sbjct: 752 SHSAAL 757
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 212/503 (42%), Gaps = 80/503 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G + V+ V G H++ + DG ++ WG N
Sbjct: 51 GTLWAAGSNQFGQLGDGTGINRTSP---VQVPGTWKTVAAGTTHSLGIKADGSLWAWGSN 107
Query: 97 DEGALGREAE----GDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG+ ++F P + V +SAG+ S L DGT+++WG + G
Sbjct: 108 LFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWG--NNLFG 165
Query: 153 SMGLKGEGIQKTPLKLESVSG------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G G + + P ++ V+ V +A+G +H + L + G L G
Sbjct: 166 ELG-DGTTVSR-PQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGA-------- 215
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKGSILAFGLNNY 261
+ + G + + P PLK D +T + ++ + + GS+ ++G N +
Sbjct: 216 ----NLTGQLGTGGTGILPNPTPLKIGTDRD-WTAISAGEMHSVALKADGSLWSWGQNLF 270
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
+LG V G TP + + SD + +A+G H++AL+ G + A+G + G
Sbjct: 271 GELGNG---VALPGANVT-TPTRVGTGSD--WVAIAAGALHTVALHRNGTVSAWGNNAQG 324
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G + N S P P+ + + +IA G VSF++ + G ++GWG QLGN
Sbjct: 325 AVGDGTVANRSTPTLIVAPVTLVNN---VAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN 381
Query: 379 GKEDDI-------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
G + L S G ++A+G + G+LG + P
Sbjct: 382 GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLG-DGTTTPSAI 440
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE--- 470
P P+ T+ A G S A+ ++G L+ WG + QLG G P +I
Sbjct: 441 PVPVVGGAGNWRTT-ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTN 499
Query: 471 -GKQLNNYTVLQVASGGQHSVIL 492
N++T VA GG HS+ L
Sbjct: 500 PASAGNDWTA--VAGGGAHSLGL 520
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 161/380 (42%), Gaps = 44/380 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G +GQLG G +V N G H+V + DG ++ WG N
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDN 476
Query: 97 DEGALGREAEGDSEFIPQ--TVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDS 150
G LG + + PQ TV P A ++ G +HS+ L DGT+++WG ++
Sbjct: 477 SSGQLGIGSTVAAS-TPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGD--NT 533
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--------IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G +G G G ++ V+G V +A+G + L + G + T G
Sbjct: 534 FGQLG-DGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 203 QLGR---ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
QLG + + RN ++ P + + + + G++ A+G N
Sbjct: 593 QLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGAN 652
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG + T FTP + + + LA+G HSLA S+G ++A+G +
Sbjct: 653 SVGQLGNGVT-------TATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 320 YGRLGL---KNVSEPVT-EPTPIP---------SLQDKTITSIACGNCVSFAIDSEGVLY 366
G+LG ++P+ +P +P S D + + A G+ S A+ S G L+
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH-SAALKSNGTLW 764
Query: 367 GWGMGNGYQLGNG--KEDDI 384
WG QLGNG E DI
Sbjct: 765 TWGQNTSGQLGNGTTTEADI 784
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 96/379 (25%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S + +A+G +H + L S G L AG + GQLG T G++ P +VP
Sbjct: 32 SAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGT----------GINRTSPVQVPGT 81
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE------------------------- 266
K + T ++ I + GS+ A+G N + QLG+
Sbjct: 82 WKTVAAGTT--HSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVA 139
Query: 267 ------------ADSEVQKSGNTCF---------FTPHLIK----SLSDKKFTMLASGQH 301
D + GN F P ++ LS+ ++ +A+G
Sbjct: 140 VSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H+LAL ++G ++A+G + + + PTP+ D+ T+I+ G S A+ +
Sbjct: 200 HALALQADGTLWAWGANLT-GQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKA 258
Query: 362 EGVLYGWG------MGNGYQL-----------GNGKE----------DDILNSEGKIYAF 394
+G L+ WG +GNG L G G + L+ G + A+
Sbjct: 259 DGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAW 318
Query: 395 GRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
G + G +G + N S P P+ + + +IA G VSF++ + G ++GWG
Sbjct: 319 GNNAQGAVGDGTVANRSTPTLIVAPVTLVNN---VAIAAGTGVSFSVLANGTVFGWGGNG 375
Query: 452 GYQLGNGKEDDILEPMKIE 470
QLGNG + P +
Sbjct: 376 AGQLGNGTFGAVTAPTVLS 394
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 39/202 (19%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G +H L L S+G ++A G + +G+LG N + PV P T ++A G
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP--------GTWKTVAAG 88
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG--LKNVSEP 410
S I ++G L+ WG + +G+LG L N
Sbjct: 89 TTHSLGIKADGSLWAWG--------------------------SNLFGQLGQPLVNGQLA 122
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+ +PI +++ G SF + +G L+ WG +LG+G +P+++
Sbjct: 123 TNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVV 182
Query: 471 GKQLNNYTVLQVASGGQHSVIL 492
L+N + VA+GG+H++ L
Sbjct: 183 ADPLSNGRYVAVAAGGEHALAL 204
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2953 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3011 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3070 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3120
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3121 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3173
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3174 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3225
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3226 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3265
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3266 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3315
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3063
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3064 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3118
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3119 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3178
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3179 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3223
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3224 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3275
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3276 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 57/343 (16%)
Query: 164 TPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
TP LES+ + V + SG H + L+S G + + G E G+LG + R R
Sbjct: 3969 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP--RV 4026
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
+ L EV +D G ++ +++ G + +G Y +LG +DSE Q
Sbjct: 4027 IESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ------- 4073
Query: 280 FTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
P L+++L + +A SG +L L + ++++G DYG+LG + S+ P
Sbjct: 4074 LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMK 4132
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRH 397
I SL + + CG+ S A+ G +Y WG G
Sbjct: 4133 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------------------------- 4166
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
DY RLG + V P + LQ K + +IA G+ +G +Y WG + QLG+
Sbjct: 4167 DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGD 4225
Query: 458 GKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
G + I P ++GK++N +VA G H++ + KP
Sbjct: 4226 GTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSKP 4263
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2945 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2999
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3000 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3059
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3060 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3117
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3118 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3164
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3165 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3217
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3218 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3276
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3277 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3309
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3310 GSSHSVA 3316
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 3977 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 4034
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + +
Sbjct: 4035 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRV 4087
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4088 VDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4145
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4146 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4195
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4196 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 4247
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 4248 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4280
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 150/319 (47%), Gaps = 51/319 (15%)
Query: 61 TFALVEDLDNV----VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
T L+E + +V V V GG H + L+ +G+VY+WG ++G LG + P+ +
Sbjct: 3969 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVI 4027
Query: 117 NLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG- 173
+ + V ++AG +HS + G +Y WG R +G +G Q P +E++ G
Sbjct: 4028 ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR--YGRLGHSDSEDQLKPKLVEALQGH 4085
Query: 174 -IVKIA--SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+V IA SG + LT + + G + G+LG RG S + +VP+
Sbjct: 4086 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG------------RGGS--DGCKVPM 4131
Query: 231 KRKHIDDVFTGV----------YNTFISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCF 279
K D TG+ ++ ++ G++ +G +Y +LG +D V++
Sbjct: 4132 KI----DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR------ 4181
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P ++ L KK +A+G H + +G++Y +G +D G+LG + + P +
Sbjct: 4182 --PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTNAIQRPRLVA 4238
Query: 340 SLQDKTITSIACGNCVSFA 358
+LQ K + +ACG+ + A
Sbjct: 4239 ALQGKKVNRVACGSAHTLA 4257
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2951 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3003
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3048
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3049 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3098
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3099 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3156
Query: 490 VILA 493
LA
Sbjct: 3157 QTLA 3160
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVL 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4014 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4072 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L +A SG +L L + ++++G D
Sbjct: 4124 GRLGHSDSEDQ-------LKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4177 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4227
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4228 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4268
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4269 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4323
Query: 497 P 497
P
Sbjct: 4324 P 4324
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3233
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3234 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3274 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPVLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 175/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3953 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4011
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4012 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4072 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4126
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ H+ DV G ++ ++ ++G +Y +
Sbjct: 4127 GHSDSEDQ-------LKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4180 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4232
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4233 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4287
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4288 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4114
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + V +GD+ ++ L +D TV++
Sbjct: 4115 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWS 4171
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4172 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4230 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4279
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4280 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4331
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4332 AQVPMEYNHL 4341
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDE-AIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4216 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4274
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4275 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 469 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 527
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 528 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 587
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 588 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 646
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 647 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 704
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 705 VAAGSTHCLALTE 717
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 446 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 495
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 496 HHYLALAATGEVYSWGCGDGGRLGH------------------GDTVPLEEPKVISAFSG 537
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 538 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 590
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 591 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 649
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 650 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 709
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 710 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 767
Query: 439 DS 440
S
Sbjct: 768 SS 769
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 541
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 542 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 599
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 600 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 648
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 701
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 702 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 759
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 760 GPAQSFAWSS 769
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 612 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 665
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 666 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725
Query: 146 S 146
S
Sbjct: 726 S 726
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 558 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 616
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 617 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 673
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 674 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 732
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 733 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 778
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 505 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 562
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 563 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 621
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 622 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 679
Query: 204 LGRITQ 209
LG T+
Sbjct: 680 LGHGTE 685
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 38/245 (15%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTP 337
P + S SDK TM+AS G+H+ LAL +G +Y++G D GRLG N+S EP
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHY-LALTQDGCVYSWGNGDGGRLGHGDNISH--DEPKL 554
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------- 384
I +L +K I IACG+ S A+ + G LY WG GN +LG+G DD+
Sbjct: 555 IETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHM 614
Query: 385 ---------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ + G ++++G DYG+LG + S+ P + L D + +
Sbjct: 615 VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG-RGGSDGSKTPKIVDKLLDINVVRVF 673
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG S A+ + G +Y WG G+ Y+LG+G E+ + P IE L + + ++ GG H
Sbjct: 674 CGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIES--LRDKKIKDLSVGGTHI 731
Query: 490 VILAK 494
+ L +
Sbjct: 732 LALTE 736
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLL 194
+ VY WG D GLKG I K P++ E +S + + IA G+ +++ G L
Sbjct: 2949 QQSAVYVWG-LNDKDQLGGLKGSKI-KIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLY 3006
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSK 250
G G+LG + EP +P +++ G + ++
Sbjct: 3007 ACGEGTNGRLG----------LGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQD 3056
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G +LG + T P LI+SL K+ +A G HS A+ S G
Sbjct: 3057 GKVFSWGEGEDGKLGHGNC-------TTLDKPRLIESLKSKRIRDIACGSGHSAAIASNG 3109
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGW 368
++Y +G +YGRLG + + + +P + +L + + +ACG + + ++ ++G +Y W
Sbjct: 3110 ELYTWGLGEYGRLGHGDTATQM-KPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTW 3168
Query: 369 GMGNGYQLGNGKED--------DILN------------------SEGKIYAFGRHDYGRL 402
G G+ +LG G D D LN G+++ +G+ DY RL
Sbjct: 3169 GDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3228
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G N V +PT + L+ K I +A G A+ G +Y WG + Q GNG
Sbjct: 3229 GHGN-DHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIV 3287
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+P + +L++ + +V+ G HS+
Sbjct: 3288 NRKPSLVH--ELDDTRMNRVSCGSSHSI 3313
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 170/397 (42%), Gaps = 67/397 (16%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G I K P ES+S + +++A G +T+ G + +
Sbjct: 3932 GAIYGWG--HNHRGQLGGLEGAKI-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3988
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G GR+ G+ + VP + I VF G + +
Sbjct: 3989 TG---YGAAGRL-----------GIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLAL 4034
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P L++ L + +A G HHS A+
Sbjct: 4035 SSEGHVYSWGEGDDGKLGHGN-------RLSYDRPKLVEDLLGIEIVDIACGGHHSAAIT 4087
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + S+ P + +LQD + +ACG + + + + +
Sbjct: 4088 SAGWLYTWGKGRYGRLGHGD-SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4146
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G +Y +G+ DY
Sbjct: 4147 WSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDY 4206
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4207 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGT 4265
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + L + +VA G H++ + K
Sbjct: 4266 TSALQRPRLVHA--LQGKKITRVACGSAHTLAWSTAK 4300
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 179/417 (42%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K A E L + + + GG T+ +T DGKVY+
Sbjct: 3930 GSGAIYGWGHNHRGQLG-GLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3988
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GA GR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 3989 TG---YGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGE 4045
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G P +E + G IV IA G H +TS G L T G +G+
Sbjct: 4046 GDD--GKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWG---KGRY 4100
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + R P V L+ + DV G ++ ++ ++G +
Sbjct: 4101 GRLGHGDSDDQLR-------PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4153
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I SL+ + G S+AL G +Y +G+ DY
Sbjct: 4154 YGKLGRGGSDGCK-------VPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDY 4206
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4207 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG- 4264
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K IT +ACG+ + A
Sbjct: 4265 --------------------------TTSALQRPRLVHALQGKKITRVACGSAHTLA 4295
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 48/349 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D + E K L + + V V GG H + LT
Sbjct: 2995 TLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFI--PQTV-NLPKKAVQ-ISAGDSHSVALLEDGTV 141
+DGKV++WG ++G LG G+ + P+ + +L K ++ I+ G HS A+ +G +
Sbjct: 3055 QDGKVFSWGEGEDGKLG---HGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGEL 3111
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAG 197
Y WG +G +G Q P ++++SG +V++A G+ + LT+ G + T G
Sbjct: 3112 YTWG--LGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWG 3169
Query: 198 CPEQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
+ G+LGR T R G+ +E G ++ ++ G
Sbjct: 3170 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECG--------------AQFSLALTKYG 3215
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ +G +Y +LG D V+K P L++ L KK +A G H LA+ G
Sbjct: 3216 EVWTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKIVHVAVGALHCLAVTDTG 3267
Query: 311 KIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
++YA+G +D+G+ G N + V +P+ + L D + ++CG+ S A
Sbjct: 3268 QVYAWGDNDHGQQG--NGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIA 3314
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 45/280 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++ G + ++G + +LG D N P LI++L +K +A G
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGD-------NISHDEPKLIETLLEKNIIFIACGS 570
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 358
+S AL++ G++Y +GR +YGRLG ++ VT PT + +L+ + +ACG + +
Sbjct: 571 TYSAALSASGELYTWGRGNYGRLG-HGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLC 629
Query: 359 IDSEGVLYGWGMGNGYQLGNGKED------------DI--------------LNSEGKIY 392
+ + G+++ WG G+ +LG G D DI L + G++Y
Sbjct: 630 VTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVY 689
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+G+ D RLG N E V P I SL+DK I ++ G A+ + +YGWG N
Sbjct: 690 TWGKGDAYRLGHGN-EEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGR-ND 747
Query: 453 YQLGNGKEDDILEPMKIEGK---QLNNYTVLQVASGGQHS 489
Y G+ D L P+ E L++ V+ +ASG S
Sbjct: 748 Y----GQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQS 783
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 165/354 (46%), Gaps = 58/354 (16%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V + G G G+LG+G P ++E ++ V V GG H
Sbjct: 3976 TLFAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKK----VAVNSGGKHC 4031
Query: 82 VCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ L+ +G VY+WG D+G LG R + + + + + + V I+ G HS A+
Sbjct: 4032 LALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGI--EIVDIACGGHHSAAITSA 4089
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLL 194
G +Y WG R +G +G Q P +E++ ++ +A SG + +T N+
Sbjct: 4090 GWLYTWGKGR--YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4147
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF-TGV--------YNT 245
+ G + G+LG RG S + +VPLK ID + GV ++
Sbjct: 4148 SWGDGDYGKLG------------RGGS--DGCKVPLK---IDSLAGLGVIKVECGSQFSV 4190
Query: 246 FISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
++ G++ +G +Y +LG D V++ P + +L KK +A+G H +
Sbjct: 4191 ALTRSGAVYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCV 4242
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
A + +G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4243 ACSDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4295
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 27/288 (9%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVAL 135
G H + LT+DG VY+WG D G LG + S P+ + L K + I+ G ++S AL
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLG-HGDNISHDEPKLIETLLEKNIIFIACGSTYSAAL 576
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRG 191
G +Y WG R ++G +G P + ++ G +V +A SG + +T+ G
Sbjct: 577 SASGELYTWG--RGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASG 634
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSK 250
+ + G + G+LGR S+ + L+ V VF G ++ ++++
Sbjct: 635 IVFSWGDGDYGKLGR-GGSDGSKTPKIVDKLLDINVV--------RVFCGGQFSAALTAR 685
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + +G + +LG + E + P LI+SL DKK L+ G H LAL +
Sbjct: 686 GEVYTWGKGDAYRLGHGNEEHVR-------YPKLIESLRDKKIKDLSVGGTHILALTEDQ 738
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+Y +GR+DYG++ + V+EP+ P+L K + +A G SFA
Sbjct: 739 FVYGWGRNDYGQID-PTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFA 785
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 42/321 (13%)
Query: 75 VVGGMHTV-CLTEDGKVYTWGCNDEGALGREAEGDS------EFIPQTVNLPKKAVQISA 127
+ GG T+ ++++GK+Y G EG GR GD + IP K V + +
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACG---EGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHS 3045
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
G H++AL +DG V++WG D G +G P +ES+ I IA G+ H
Sbjct: 3046 GGKHALALTQDGKVFSWGEGED--GKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSA 3103
Query: 186 MLTSRGNLLTAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG 241
+ S G L T G E G+LG TQ ++P V L + + V G
Sbjct: 3104 AIASNGELYTWGLGEYGRLGHGDTATQ-------------MKPKLVQALSGQRVVQVACG 3150
Query: 242 VYNT---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +++ G + +G ++ +LG + G+ +TP L+ L+ +
Sbjct: 3151 SRDAQTMSLTADGCVYTWGDGDFGKLG-------RGGSDGCYTPLLVDRLNGLGVVQVEC 3203
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G SLAL G+++ +G+ DY RLG N V +PT + L+ K I +A G A
Sbjct: 3204 GAQFSLALTKYGEVWTWGKGDYFRLGHGN-DHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3262
Query: 359 IDSEGVLYGWGMGNGYQLGNG 379
+ G +Y WG + Q GNG
Sbjct: 3263 VTDTGQVYAWGDNDHGQQGNG 3283
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 135/313 (43%), Gaps = 53/313 (16%)
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLT 188
H +AL +DG VY+WG+ G +G P +E++ I+ IA G+ + L+
Sbjct: 520 HYLALTQDGCVYSWGN--GDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT-- 245
+ G L T G G+LG + + P V + H + V G ++
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVT----------VPTLVTTLKGHMVVHVACGSGDSQT 627
Query: 246 -FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+++ G + ++G +Y +LG S+ K TP ++ L D + G S
Sbjct: 628 LCVTASGIVFSWGDGDYGKLGRGGSDGSK-------TPKIVDKLLDINVVRVFCGGQFSA 680
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL + G++Y +G+ D RLG N E V P I SL+DK I ++ G A+ +
Sbjct: 681 ALTARGEVYTWGKGDAYRLGHGN-EEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQF 739
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+YGW GR+DYG++ + V+EP+ P+L K
Sbjct: 740 VYGW--------------------------GRNDYGQID-PTLGPVVSEPSLCPTLSSKN 772
Query: 425 ITSIACGNCVSFA 437
+ +A G SFA
Sbjct: 773 VIGLASGPTQSFA 785
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 37/285 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D + L+E L N++ + G ++ L+ G++Y
Sbjct: 525 TQDGCVYSWGNGDGGRLGHG-DNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELY 583
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSF 147
TWG + G LG D +P V K V +GDS ++ + G V++WG
Sbjct: 584 TWGRGNYGRLG-HGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGD- 641
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G KTP ++ + I V++ G LT+RG + T G + +LG
Sbjct: 642 -GDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLG 700
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGSILAFGLNNYSQ- 263
+ R +E L+ K I D+ G + ++ + +G N+Y Q
Sbjct: 701 HGNEEHV-----RYPKLIE----SLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751
Query: 264 ---LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
LG SE P L +LS K LASG S A
Sbjct: 752 DPTLGPVVSE-----------PSLCPTLSSKNVIGLASGPTQSFA 785
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKV 90
C T G+V + G GD G+LG G + + + LD NVV V GG + LT G+V
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEV 688
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRD 149
YTWG D LG E + +L K ++ +S G +H +AL ED VY WG R+
Sbjct: 689 YTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWG--RN 746
Query: 150 SHGSM 154
+G +
Sbjct: 747 DYGQI 751
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLGN------------------------GKEDDI--LNSEG 389
+ + D G +YGWG + QLG G E + + ++G
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADG 3984
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 447
K+Y+ G GRLG+ ++ V PT + S+Q I +A G A+ SEG +Y W
Sbjct: 3985 KVYSTGYGAAGRLGIGG-TDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSW 4043
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G G+ +LG+G P +E L ++ +A GG HS +
Sbjct: 4044 GEGDDGKLGHGNRLSYDRPKLVE--DLLGIEIVDIACGGHHSAAI 4086
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVL 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4021 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4078
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4079 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4130
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L +A SG +L L + ++++G D
Sbjct: 4131 GRLGHSDSEDQ-------LKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4183
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4184 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4234
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4235 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4275
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4276 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4330
Query: 497 P 497
P
Sbjct: 4331 P 4331
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2968 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3025
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3026 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3085 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3135
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3136 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3188
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3189 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3240
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3241 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3280
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3281 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3330
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3078
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3079 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3133
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3134 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3193
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3194 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3238
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3239 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3290
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3291 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPVLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 175/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3960 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4018
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4019 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4078
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4079 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4133
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V L+ H+ DV G ++ ++ ++G +Y +
Sbjct: 4134 GHSDSEDQ-------LKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4186
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4187 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4239
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4240 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4294
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4295 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2960 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3014
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3015 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3074
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3075 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3132
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3133 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3179
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3180 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3232
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3233 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3291
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3292 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3324
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3325 GSSHSVA 3331
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 156/333 (46%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 4045 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 4102
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK---- 120
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V +
Sbjct: 4103 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHHV 4155
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4156 VDVACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4213
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4214 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4263
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4264 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 4315
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 4316 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4348
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2966 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3018
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3063
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3064 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3113
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3114 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3171
Query: 490 VILA 493
LA
Sbjct: 3172 QTLA 3175
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDE-AIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 183/411 (44%), Gaps = 57/411 (13%)
Query: 89 KVYTWGCNDEGALG--REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
+V+ WG ND+ LG + ++ + I +T++ K VQI G + +DG ++A G
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSKIKTPGINETLS-TLKCVQIVGGSKSLFCVTQDGKLFACGE 2973
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQG 202
+ +G+ + + P +L S+S V K+A SG H + LT G + + G + G
Sbjct: 2974 ATNGRLGLGISAGNVPQ-PRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 3032
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG ++ + + +E L+ K + D+ G ++ I S G + +GL Y
Sbjct: 3033 KLGHFSRMNCDKP-----RLIEA----LRSKRVRDIACGGSHSAAIISNGDLYTWGLGEY 3083
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHD 319
+LG D NT P L+K+L ++ +A G +LAL G +Y++G D
Sbjct: 3084 GRLGHGD-------NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGD 3136
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG + SE + P PI L + I CG S A+ G ++ WG G
Sbjct: 3137 FGKLG-RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKG-------- 3187
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG V +P + +L+ K +T +A G ++
Sbjct: 3188 ------------------DYFRLG-HGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVL 3228
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GN +P ++G L + +VA G HS+
Sbjct: 3229 DNGQVYAWGDNDHGQQGNSTTTVNRKPALVQG--LEGCKISRVACGSSHSI 3277
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 168/343 (48%), Gaps = 35/343 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCL 84
+L C T G + CG+ G+LGLG R+ +L + + V V GG H + L
Sbjct: 2958 SLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMAL 3017
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVY 142
T DGKV++WG D+G LG + + + P+ + K+ I+ G SHS A++ +G +Y
Sbjct: 3018 TVDGKVFSWGEGDDGKLGHFSRMNCD-KPRLIEALRSKRVRDIACGGSHSAAIISNGDLY 3076
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGC 198
WG +G +G Q P ++++ G ++++A G+ + LT G + + G
Sbjct: 3077 TWG--LGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGD 3134
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFG 257
+ G+LGR G S P E L + + G ++ ++ G + +G
Sbjct: 3135 GDFGKLGR--------GGSEGCSVPHPIE-RLNGVGVCQIECGAQFSLALTKSGQVWTWG 3185
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D+ V+K P L+++L KK T +A G H L++ G++YA+G
Sbjct: 3186 KGDYFRLGHGTDAHVRK--------PQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWG 3237
Query: 317 RHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G N + V +P + L+ I+ +ACG+ S A
Sbjct: 3238 DNDHGQQG--NSTTTVNRKPALVQGLEGCKISRVACGSSHSIA 3278
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 34/240 (14%)
Query: 281 TPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
TP LI+S+ +A SG H LAL++EG++Y++G + G+LG N S P P I
Sbjct: 4011 TPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRS-PCDRPRAI 4069
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
SL+ K + IA G S I S G LY WG G +LG+G +D
Sbjct: 4070 ESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRV 4129
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ + ++++G DYG+LG + S+ P I +LQ + + C
Sbjct: 4130 TDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG-RGGSDGCKVPMKIDALQGLGVIKVEC 4188
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ G +Y WG G+ ++LG+G ED I P + L ++ +A G H V
Sbjct: 4189 GSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRC--TTLQGKKIVSIACGSLHCV 4246
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P I+SL K+ +A+G HS + S G++Y++G+ YGRLG + SE T+P + +L
Sbjct: 4066 PRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD-SEDQTKPKLVDAL 4124
Query: 342 QDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------- 384
+ +T +ACG + + I + ++ WG G+ +LG G D
Sbjct: 4125 KGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVI 4184
Query: 385 -----------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
L G +Y +G+ DY RLG + + P +LQ K I SIACG+
Sbjct: 4185 KVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGTEDHIRRPRRCTTLQGKKIVSIACGSL 4243
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSV 490
A G +Y WG + QLG+G + I P ++GK++N +VA G HS+
Sbjct: 4244 HCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-----RVACGSAHSL 4298
Query: 491 ILAKPKP 497
+ KP
Sbjct: 4299 AWSTNKP 4305
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 162/371 (43%), Gaps = 49/371 (13%)
Query: 31 KCKTGGGV------VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTV 82
K K G GV V G D QLG GP + KT + E L + V++V G
Sbjct: 2902 KVKCGSGVKDIQTQVFVWGLNDKDQLG-GPKGSKIKTPGINETLSTLKCVQIVGGSKSLF 2960
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK------KAVQISAGDSHSVALL 136
C+T+DGK++ G G LG + +PQ L K V + +G H++AL
Sbjct: 2961 CVTQDGKLFACGEATNGRLGLGISAGN--VPQPRQLTSLSQYVIKKVAVHSGGRHAMALT 3018
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLL 194
DG V++WG D G +G P +E++ + IA G H + S G+L
Sbjct: 3019 VDGKVFSWGEGDD--GKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLY 3076
Query: 195 TAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FI 247
T G E G+LG TQ L P V L+ + + V G + +
Sbjct: 3077 TWGLGEYGRLGHGDNTTQ-------------LRPKLVKALEGQRVIQVALGSRDAQTLAL 3123
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G++ ++G ++ +LG SE C PH I+ L+ + G SLAL
Sbjct: 3124 TDSGTVYSWGDGDFGKLGRGGSE------GC-SVPHPIERLNGVGVCQIECGAQFSLALT 3176
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G+++ +G+ DY RLG V +P + +L+ K +T +A G ++ G +Y
Sbjct: 3177 KSGQVWTWGKGDYFRLG-HGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYA 3235
Query: 368 WGMGNGYQLGN 378
WG + Q GN
Sbjct: 3236 WGDNDHGQQGN 3246
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 37/246 (15%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++S+G + ++G ++ +LG D+ TC +P LI L K +A G
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHGDT------VTCD-SPMLINELHGKSVVNVACGS 539
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFA 358
HHS A+ + G+++ +GR +GRLGL + +E + P + L T+ +AC G+ + A
Sbjct: 540 HHSAAITASGELFTWGRGSFGRLGLGS-TEDILTPALVSGLLGVTVVDVACGSGDAQTIA 598
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+ G +Y WG G +YG+LG + SE P +
Sbjct: 599 LADTGSVYSWGDG--------------------------EYGKLG-RGGSEGCKAPKLVD 631
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
LQ +T + CG S A+ G ++ WG G GY+LG+G E+ + P ++E + T
Sbjct: 632 KLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVT 691
Query: 479 VLQVAS 484
L + S
Sbjct: 692 SLSLGS 697
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G+G+ G+LG G + A +E L VV++ GG H+ C+T G++Y+WG
Sbjct: 4042 GEVYSWGEGEDGKLGHGNRSPCDRPRA-IESLRGKEVVDIAAGGAHSACITSTGELYSWG 4100
Query: 95 CNDEGALGREAEGDSE--FIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFR 148
+G GR GDSE P+ V+ K V +GD+ ++ + +D +V++WG
Sbjct: 4101 ---KGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGD-- 4155
Query: 149 DSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G +G G K P+K++++ G++K+ G+ V LT G + T G + +LG
Sbjct: 4156 GDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4215
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG 265
T+ R RR + L+ K I + G ++ + G + +G N+ QLG
Sbjct: 4216 GTEDHI-RRPRRCTT--------LQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG 4266
Query: 266 EADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+ + +Q+ P L+ +L KK +A G HSLA ++ + A
Sbjct: 4267 DGTTNAIQR--------PRLVAALQGKKINRVACGSAHSLAWSTNKPVNA 4308
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 47/317 (14%)
Query: 61 TFALVEDLDNV----VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
T L+E + +V V + GG H + L+ +G+VY+WG ++G LG +
Sbjct: 4011 TPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIE 4070
Query: 117 NLP-KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI- 174
+L K+ V I+AG +HS + G +Y+WG R +G +G Q P ++++ G
Sbjct: 4071 SLRGKEVVDIAAGGAHSACITSTGELYSWGKGR--YGRLGHGDSEDQTKPKLVDALKGYR 4128
Query: 175 ---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
V SG + +T ++ + G + G+LG RG S + +VP+K
Sbjct: 4129 VTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG------------RGGS--DGCKVPMK 4174
Query: 232 RKHIDDVFTGV----------YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
D G+ ++ ++ G++ +G +Y +LG + + C
Sbjct: 4175 I----DALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRC--- 4227
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
+L KK +A G H +A G++Y +G +D G+LG + + P + +L
Sbjct: 4228 ----TTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG-DGTTNAIQRPRLVAAL 4282
Query: 342 QDKTITSIACGNCVSFA 358
Q K I +ACG+ S A
Sbjct: 4283 QGKKINRVACGSAHSLA 4299
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 129/291 (44%), Gaps = 33/291 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSV 133
G H + LT +G VY+WG D G LG GD+ P +N K V ++ G HS
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLG---HGDTVTCDSPMLINELHGKSVVNVACGSHHSA 543
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTS 189
A+ G ++ WG R S G +GL TP + + G+ V SG + L
Sbjct: 544 AITASGELFTWG--RGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD 601
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFI 247
G++ + G E G+LGR S + P V L+ + V+ G Y+ +
Sbjct: 602 TGSVYSWGDGEYGKLGR----GGSEGCK------APKLVDKLQGLDVTRVYCGPQYSAAV 651
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
G++ +G +LG E + P +++L+ K T L+ G HH LA
Sbjct: 652 CKNGAVFTWGNGEGYKLGHGTEEHVR-------FPRQVETLAGKHVTSLSLGSHHCLATT 704
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
EG++ ++GR+D G+LG + EP SL K I I C + +FA
Sbjct: 705 EEGELLSWGRNDKGQLGEGHTGLK-AEPAFAASLLGKCIIGITCSSAQTFA 754
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 152/388 (39%), Gaps = 70/388 (18%)
Query: 61 TFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE--GDSEFIPQTVNL 118
T L DLD++++V + L G+VY + E E D E I
Sbjct: 426 TIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEII------ 479
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSG-- 173
K S G SH +AL +G VY+WG +G G G G T P+ + + G
Sbjct: 480 --KLAAHSEG-SHCLALTSEGDVYSWG-----NGDFGKLGHGDTVTCDSPMLINELHGKS 531
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
+V +A G+ H +T+ G L T G +G GR+ S L P V L
Sbjct: 532 VVNVACGSHHSAAITASGELFTWG---RGSFGRLGLGSTE-------DILTPALVSGLLG 581
Query: 233 KHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
+ DV G ++ GS+ ++G Y +LG SE K+ P L+ L
Sbjct: 582 VTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKA-------PKLVDKLQ 634
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
T + G +S A+ G ++ +G + +LG E V P + +L K +TS+
Sbjct: 635 GLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLG-HGTEEHVRFPRQVETLAGKHVTSL 693
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+ G+ A EG L WG + QLG G GLK
Sbjct: 694 SLGSHHCLATTEEGELLSWGRNDKGQLGE---------------------GHTGLK---- 728
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA 437
EP SL K I I C + +FA
Sbjct: 729 --AEPAFAASLLGKCIIGITCSSAQTFA 754
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 38/243 (15%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +GLN+ QLG K TP + ++LS K + G + +GK+
Sbjct: 2916 VFVWGLNDKDQLGGPKGSKIK-------TPGINETLSTLKCVQIVGGSKSLFCVTQDGKL 2968
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGWGM 370
+A G GRLGL + V +P + SL I +A G + A+ +G ++ WG
Sbjct: 2969 FACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGE 3028
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
G+ +GK+ F R + + P I +L+ K + IAC
Sbjct: 3029 GD---------------DGKLGHFSRMNCDK------------PRLIEALRSKRVRDIAC 3061
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S AI S G LY WG+G +LG+G L P + K L V+QVA G + +
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLV--KALEGQRVIQVALGSRDAQ 3119
Query: 491 ILA 493
LA
Sbjct: 3120 TLA 3122
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D + + L+ +L +VV V G H+ +T G+++
Sbjct: 494 TSEGDVYSWGNGDFGKLGHG-DTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELF 552
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQIS--AGDSHSVALLEDGTVYAWG 145
TWG G+ GR G +E I P V+ L V ++ +GD+ ++AL + G+VY+WG
Sbjct: 553 TWG---RGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWG 609
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G K P ++ + G + ++ G + + G + T G E +
Sbjct: 610 D--GEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYK 667
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS-KGSILAFGLNNYS 262
LG T+ R R+ + L KH+ + G ++ ++ +G +L++G N+
Sbjct: 668 LGHGTEEHV-RFPRQVET--------LAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKG 718
Query: 263 QLGE 266
QLGE
Sbjct: 719 QLGE 722
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 35/235 (14%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G I +G N+ QLG + K +C ++L+ + L G+ ++ +G
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSC-------ETLATMRPVQLIGGEQTLFSITGDG 3988
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
K+ A G + G ++ V PT I S+Q I +A +
Sbjct: 3989 KVCATG-YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINS----------------- 4030
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
GK L++EG++Y++G + G+LG N S P P I SL+ K + IA
Sbjct: 4031 -------GGKHCLALSAEGEVYSWGEGEDGKLGHGNRS-PCDRPRAIESLRGKEVVDIAA 4082
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
G S I S G LY WG G +LG+G +D +P ++ L Y V VA G
Sbjct: 4083 GGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDA--LKGYRVTDVACG 4135
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V T G+GD +LG G D + R +V + G +H V T+ G+VYT
Sbjct: 4197 TKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYT 4256
Query: 93 WGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
WG NDEG LG +G + I P+ V KK +++ G +HS+A
Sbjct: 4257 WGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHSLA 4299
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDL--DNVVEVVVGGMHTVCLTEDG 88
CK G V T G G+ +LG G + E F VE L +V + +G H + TE+G
Sbjct: 652 CKNGA--VFTWGNGEGYKLGHGTE--EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEG 707
Query: 89 KVYTWGCNDEGALG 102
++ +WG ND+G LG
Sbjct: 708 ELLSWGRNDKGQLG 721
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2963 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3020
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3021 EATNGRLGLGLSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3079
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E L+ K I D+ G ++ ++S G + +GL
Sbjct: 3080 GKLGHFSRMNCDKP-----RLIEA----LRAKRIRDIACGSSHSAALTSSGELYTWGLGE 3130
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3131 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3183
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3184 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3235
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3236 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3275
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3276 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3325
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 180/422 (42%), Gaps = 62/422 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + P LES+ + V + SG H + L+S G + + G E
Sbjct: 4015 -YGAGGRLGIGGTESV-SAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4072
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG ++ R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4073 GKLGHGSRSPCDRP--RVVESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4124
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L++ L + +A SG +L L + ++++G D
Sbjct: 4125 GRLGHSDSEDQ-------LKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4178 YGKLG-RGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4228
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4229 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4269
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4270 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4324
Query: 497 PN 498
P+
Sbjct: 4325 PS 4326
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G+++++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L+ V+
Sbjct: 657 DLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEG--LHGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 51/343 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
WG D+G LG + + + P+ + K+ I+ G SHS AL G +Y WG
Sbjct: 3074 WGEGDDGKLGHFSRMNCD-KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGL---- 3128
Query: 151 HGSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQ 203
G G G G T LK + V ++++A G+ + LT G + + G + G+
Sbjct: 3129 -GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3187
Query: 204 LGR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
LGR I Q N +G+ +E G ++ ++ G + +
Sbjct: 3188 LGRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTW 3232
Query: 257 GLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G +Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+
Sbjct: 3233 GKGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3284
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G +D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3285 GDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRN----------IVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 506 HHYLALAATGEVFSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 547
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 600
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLE 659
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGS 719
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 720 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 777
Query: 439 DS 440
S
Sbjct: 778 SS 779
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 176/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3954 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4012
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ + V +++G H +AL +G VY+WG D
Sbjct: 4013 TGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4072
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4073 --GKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4127
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + + H + DV G ++ ++ ++G +Y +
Sbjct: 4128 GHSDSEDQ-------LKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4180
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I+SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4181 LGRGGSDGCK-------VPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4233
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4234 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4288
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4289 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 168/413 (40%), Gaps = 64/413 (15%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V G D QLG L ++ +F+ NVV+V G +T +GKVY G
Sbjct: 2964 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3023
Query: 98 EGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G LG + IP+ + K V + +G H+ AL DG V++WG D G
Sbjct: 3024 NGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GK 3081
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR---IT 208
+G P +E++ I IA G+ H LTS G L T G E G+LG T
Sbjct: 3082 LGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3141
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYSQL 264
Q L+P V + H + V G + ++ +G + ++G ++ +L
Sbjct: 3142 Q-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3188
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G SE C P I+ L+ + + G SLAL G ++ +G+ DY RLG
Sbjct: 3189 GRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3241
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
V +P + L+ K I +A G A+ G +Y WG + Q GNG
Sbjct: 3242 -HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG----- 3295
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ +PT + L+ + IT +ACG+ S A
Sbjct: 3296 ----------------------TTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 180/386 (46%), Gaps = 67/386 (17%)
Query: 37 GVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
G V + G+ + G+LG G P R +VE L VV+V GG H+ C+T G +Y
Sbjct: 4062 GEVYSWGEAEDGKLGHGSRSPCDRPR----VVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117
Query: 92 TWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWG 145
TWG +G GR DSE P+ V + + + V ++ +GD+ ++ L +D TV++WG
Sbjct: 4118 TWG---KGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWG 4174
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G K P+K+ES++ G+VK+ G+ V LT G + T G + +
Sbjct: 4175 D--GDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4232
Query: 204 LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
LG + + RR P +V L+ K + + TG ++ + G + +G N+
Sbjct: 4233 LG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282
Query: 262 SQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-----NSEGKIYAF 315
QLG+ + +Q+ P L+ +L KK +A G H+LA +S GK+ A
Sbjct: 4283 GQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPSSAGKLPAQ 4334
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPS-----LQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y L + PI + L I+ + C C+ D EG L G+
Sbjct: 4335 VPMEYNHL----------QEIPIIALRNRLLLLHHISELFC-PCIPM-FDLEGSLDETGL 4382
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGR 396
G +G IL S+GK AF +
Sbjct: 4383 GPS--VGFDTLRGILISQGKEVAFRK 4406
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 39/308 (12%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL------P 119
N+V++ G H + L G+V++WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQGG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E L+ +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE----KLQDLEV 660
Query: 236 DDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V G ++ ++ G + ++G + +LG E + P L++ L KK
Sbjct: 661 VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPRLLEGLHGKKVI 713
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A+G H LAL + +++++G +D + V++P EP +P L K I IACG
Sbjct: 714 DVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGP 771
Query: 354 CVSFAIDS 361
SFA S
Sbjct: 772 AQSFAWSS 779
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2961 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3013
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3058
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3059 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRAKRIRDIA 3108
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3109 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3166
Query: 490 VILA 493
LA
Sbjct: 3167 QTLA 3170
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 40/312 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P Q ++S V + +GG G V + G+GD G+LG M L+E
Sbjct: 3039 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIE 3097
Query: 67 DL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKA 122
L + ++ G H+ LT G++YTWG + G LG + ++ P+ V L +
Sbjct: 3098 ALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRV 3156
Query: 123 VQISAG--DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+Q++ G D+ ++AL ++G V++WG G +G G P +E ++ G+ +I
Sbjct: 3157 IQVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIE 3214
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
GA + LT G + T G + +LG + + R+ P V L+ K I
Sbjct: 3215 CGAQFSLALTKSGVVWTWGKGDYFRLG----HGSDVHVRK------PQVVEGLRGKKIVH 3264
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G + ++ G + A+G N++ Q G + V + P L++ L +K T +
Sbjct: 3265 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-------PTLVQGLEGQKITRV 3317
Query: 297 ASGQHHSLALNS 308
A G HS+A +
Sbjct: 3318 ACGSSHSVAWTT 3329
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L + V++ G SVAL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--EVVKVRCGSQFSVALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVFSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQGGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ V LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4217 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4275
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4276 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 179/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + +Q+ G+ A+ DG +YA G
Sbjct: 3843 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATG 3901
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3902 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3959
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3960 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4011
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L++ L + +A SG +L L + ++++G D
Sbjct: 4012 GRLGHSDSEDQ-------LKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4064
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4065 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4115
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4116 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4156
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4157 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4211
Query: 497 P 497
P
Sbjct: 4212 P 4212
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TLPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 155/354 (43%), Gaps = 67/354 (18%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 456 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 505
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-----KHID 236
H++ L + G + + GC + G+LG + EP + KH+
Sbjct: 506 HHYLALAATGEVYSWGCGDGGRLGH----------GDTLPLEEPKVISAFSGKQGGKHVV 555
Query: 237 DVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ G Y+ I+++G + +G NY +LG SE + P L+ L K
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAGLKGLKVID 608
Query: 296 LA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+A SG +LA+ G+++++G DYG+LG + S+ P I LQD + + CG+
Sbjct: 609 VACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGS 667
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNS 387
S A+ +G +Y WG G+ +LG+G E+ + L
Sbjct: 668 QFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Query: 388 EGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ +++++G +D + V++P EPT +P L K I IACG SFA S
Sbjct: 728 DSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 175/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + + ++GG T+ +T DGK+Y
Sbjct: 3841 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYA 3899
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3900 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3959
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3960 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4014
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + + H + D+ G ++ ++ ++G +Y +
Sbjct: 4015 GHSDSEDQ-------LKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4067
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4068 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4120
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4121 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4175
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4176 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4206
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 56/333 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 3926 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 3983
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V + + +
Sbjct: 3984 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVEVLQGHRV 4036
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V I+ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 4037 VDIACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4094
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 4095 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 4144
Query: 238 VFTG-VYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTM 295
+ TG ++ + G + +G N+ QLG+ + +Q+ P L+ +L KK
Sbjct: 4145 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNR 4196
Query: 296 LASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
+A G H+LA + S GK+ A +Y L
Sbjct: 4197 VACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4229
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 30/290 (10%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3018
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 EATNGRLGLGLSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3078 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3129 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
D+G+LG + SE P I L + + I CG S A+ GV++ W
Sbjct: 3182 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL------P 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTLPLEEPKVISAFSGKQGG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDTKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR 206
GR
Sbjct: 3187 GR 3188
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
S L+ + T L IV IA G
Sbjct: 736 SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPTALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 41/305 (13%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAF 315
++ +
Sbjct: 3226 VVWTW 3230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTLPLEEPKVI--SAFSGKQGGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 211/475 (44%), Gaps = 91/475 (19%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTF--ALVEDLD-NVVEVVVGGMHTVCLTEDGKVYTWG 94
V + G G G LG P +F A V DL ++ V G H++ LT+ G+++ WG
Sbjct: 19 AVYSFGDGSNGALGQ-PHSFTNDSFEPAPVPDLPPSIARVACGHYHSLALTQSGELWAWG 77
Query: 95 CNDEGALGREAE---GDSEFIPQTVN-LPKKAVQISAGDS-HSVALLEDGTVYAWGSFRD 149
N+EG LGR + + PQ V + V+ +AG S+A+ EDG++++WGS +
Sbjct: 78 RNNEGQLGRGEKSILSAATITPQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSSK- 136
Query: 150 SHGSMGLKGEGIQKT--PLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +GL G G+ ++ P K+ +++G +++++ G H + T G L + G + G+LG
Sbjct: 137 -RGQLGL-GLGVTRSLLPQKIHALAGKSVLQVSLGWGHALACTMDGELFSWGYHDSGRLG 194
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
+ + S ++P + L R + + QL
Sbjct: 195 YLLPQDQP-------SMIQPSKNTLDRNDVGEKML--------------------MEQLR 227
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ D+ + + + P L++ K +A G HSLAL+ G +++FG + +LG
Sbjct: 228 KEDAPILQ------WEPKLVELPEPCKIIQVACGLDHSLALSESGLLFSFGDNSTDQLGR 281
Query: 326 KNVSEPVTEPTPIPS-----LQDKTITSIACGNCVSFAIDS-EGVLYGWGMGNGYQLGNG 379
+ +TE +PI S L+ K + +I G S A++ Y WG +G QLG
Sbjct: 282 E-----ITEDSPIISRVGGDLEGKQVVAIGAGWGHSLAVERCSRAAYTWGWSSGSQLGR- 335
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
S P + P + L D + S+A G S A+
Sbjct: 336 ----------------------------SGPSSVPKKLEELDDP-VVSVAGGRVHSLALT 366
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
S+ ++ WG G +LG G D P+ ++ + + V+ V G HS++LA+
Sbjct: 367 SKHQVWTWGCGRNGRLGLGSSRDENLPVLVDSLE-EHAEVIDVCCGYDHSLLLAR 420
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 181/404 (44%), Gaps = 78/404 (19%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WG+ SHG +GL G ++ TP K+ + S + +IA G H + LT+ G +
Sbjct: 3 LYCWGN--ASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYAC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKG 251
G + QLG + S+ R P ++P + +D V T + ++ ++ G
Sbjct: 61 GSNDYAQLGH--ELSSKR----------PLQIP---ELVDCVITQIACGSRHSMALTEWG 105
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L++G N QLG A D +V + P +++L K +A G +HSLAL G
Sbjct: 106 QVLSWGDNECGQLGHASDQDVVQ-------LPKTVRALVSKTVVQIACGNNHSLALTCCG 158
Query: 311 KIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
++YA+G + YG+LG+K SE P + +L + +IACG SF I ++GW
Sbjct: 159 ELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGW 218
Query: 369 GMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRL 402
G N QLG E + L +EG ++ G YG+L
Sbjct: 219 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 278
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKED 461
G + P + L TI+ +ACGN + A + + G +YG+G+G+ QLG
Sbjct: 279 GHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTK 337
Query: 462 DILEPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
+ P + G ++ + Q+ SGG S++
Sbjct: 338 SLNLPQMVIGPWVSPSGSALLQSSDAQIAVVIRQIFSGGDQSIV 381
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 159/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PS+ + AV + C T G V CG D QLG ++ ++
Sbjct: 22 EQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLG--HELSSKRPLQ 79
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E +D V+ ++ G H++ LTE G+V +WG N+ G LG ++ D +P+TV + K
Sbjct: 80 IPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSK 139
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE---GIQKTPLKLESVSGI--V 175
VQI+ G++HS+AL G +YAWGS + +G +G+K G P+ L ++ GI
Sbjct: 140 TVVQIACGNNHSLALTCCGELYAWGS--NIYGQLGVKTPSELGQCNAPMLLTTLLGIPVR 197
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H +++ + G GQLG T R+ + G+ F+ G+
Sbjct: 198 AIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGD-- 255
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++++G + G Y QLG GN P ++ L
Sbjct: 256 ------------EFSVFLTNEGGVFTCGAGAYGQLGHG-----FCGNEML--PRMVMELM 296
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
+ +A G H+LA+ + G+IY FG G+LG +N
Sbjct: 297 GSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRN 335
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ +P D + IACG+
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGH---------------- 45
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +DY +LG + S+ P IP L D IT IA
Sbjct: 46 ----------RHTLFLTASGKVYACGSNDYAQLGHELSSK---RPLQIPELVDCVITQIA 92
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG QLG+ + D+++ K + L + TV+Q+A G HS
Sbjct: 93 CGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKT-VRALVSKTVVQIACGNNHS 151
Query: 490 VIL 492
+ L
Sbjct: 152 LAL 154
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V G GQLG G + + V L NV ++ GG H + L G+VY+WG N
Sbjct: 87 TVKAWGHNSAGQLGNGGNT-NQAVPTTVPRLTNVKDIAAGGKHALALDTSGQVYSWGDNS 145
Query: 98 EGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G LG GDS +P V KA QISAG S+ALLE+G VYAWG R HG +G
Sbjct: 146 YGQLGNNRTGDSRTVPDRVQGMPKAKQISAGCDFSLALLENGKVYAWG--RGIHGQLGTG 203
Query: 158 GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
P ++ + IVKI +G H + +T+ + + G GQLG +S++
Sbjct: 204 NRATSSVPRQVTGLEDIVKIDAGCYHALAITADNTVKSWGYNLYGQLGNSATKSST---- 259
Query: 218 RGMSFLEPGEVPLK---RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQK 273
VP+ + D+ G ++ + ++S + +G N Y QL E D Q
Sbjct: 260 ----------VPVDVDWLTDVSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGD---QA 306
Query: 274 SGNTCFFT----PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ T P I L + LA+G H +A+ ++ ++ +G + G+LG
Sbjct: 307 DGDNISRTNRTAPVEIPRL--EGVQHLAAGARHGVAVTAD-DVFTWGNNSEGQLG 358
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 161/357 (45%), Gaps = 42/357 (11%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTV----CLTEDGKVY 91
VL+ G G TGQLG G + + + A V L +V ++ GG + D V
Sbjct: 31 TVLSWGAGRTGQLGNGT-LSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDKTVK 89
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG N G LG ++ +P TV I+AG H++AL G VY+WG +S+
Sbjct: 90 AWGHNSAGQLGNGGN-TNQAVPTTVPRLTNVKDIAAGGKHALALDTSGQVYSWGD--NSY 146
Query: 152 GSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G G +T P +++ + +I++G D + L G + G GQLG T
Sbjct: 147 GQLGNNRTGDSRTVPDRVQGMPKAKQISAGCDFSLALLENGKVYAWGRGIHGQLG--TGN 204
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
A+ + R ++ LE I + G Y+ I++ ++ ++G N Y QLG
Sbjct: 205 RATSSVPRQVTGLE---------DIVKIDAGCYHALAITADNTVKSWGYNLYGQLG---- 251
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL------ 323
S P + L+D + + +G H+ A+ S+ +Y +G + YG+L
Sbjct: 252 ---NSATKSSTVPVDVDWLTD--VSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGDQA 306
Query: 324 GLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
N+S T P IP L+ + +A G A+ ++ V + WG + QLGNG
Sbjct: 307 DGDNISRTNRTAPVEIPRLEG--VQHLAAGARHGVAVTADDV-FTWGNNSEGQLGNG 360
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 166/398 (41%), Gaps = 54/398 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAG-----DSHSVALLEDGTVYA 143
V +WG G LG DS +L + V Q+SAG DS ++A D TV A
Sbjct: 32 VLSWGAGRTGQLGNGTLSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLAR-TDKTVKA 90
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
WG +S G +G G Q P + ++ + IA+G H + L + G + + G GQ
Sbjct: 91 WG--HNSAGQLGNGGNTNQAVPTTVPRLTNVKDIAAGGKHALALDTSGQVYSWGDNSYGQ 148
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
LG N R G S P V K ++ + G + A+G + Q
Sbjct: 149 LG---------NNRTGDSRTVPDRVQGMPKAKQISAGCDFSLALLENGKVYAWGRGIHGQ 199
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG + P + L D + +G +H+LA+ ++ + ++G + YG+L
Sbjct: 200 LGTGNRATSS-------VPRQVTGLED--IVKIDAGCYHALAITADNTVKSWGYNLYGQL 250
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++ T P + L D ++ I G ++A+ S+ +YGWG QL G + D
Sbjct: 251 G-NSATKSSTVPVDVDWLTD--VSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGDQAD 307
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
N I R T P IP L+ + +A G A+ ++ V
Sbjct: 308 GDN----ISRTNR---------------TAPVEIPRLEG--VQHLAAGARHGVAVTADDV 346
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKI--EGKQLNNYTV 479
+ WG + QLGNG + +KI EG + N T
Sbjct: 347 -FTWGNNSEGQLGNGTTVSRFDSVKILQEGSAIKNVTA 383
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 72/341 (21%)
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYN-----TF 246
+L+ G GQLG T + L P V L R +D + G + T
Sbjct: 32 VLSWGAGRTGQLGNGTLSDS----------LSPASVTSLFRGDVDQMSAGGTSSADSFTL 81
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ ++ A+G N+ QLG GNT P + L++ K +A+G H+LAL
Sbjct: 82 ARTDKTVKAWGHNSAGQLGNG-------GNTNQAVPTTVPRLTNVK--DIAAGGKHALAL 132
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++ G++Y++G + YG+LG + T P + + S C S A+ G +Y
Sbjct: 133 DTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPKAKQISAGCD--FSLALLENGKVY 190
Query: 367 GWGMGNGYQLGNGKE------------DDI------------LNSEGKIYAFGRHDYGRL 402
WG G QLG G +DI + ++ + ++G + YG+L
Sbjct: 191 AWGRGIHGQLGTGNRATSSVPRQVTGLEDIVKIDAGCYHALAITADNTVKSWGYNLYGQL 250
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G + ++ T P + L D ++ I G ++A+ S+ +YGWG QL G + D
Sbjct: 251 G-NSATKSSTVPVDVDWLTD--VSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGDQAD 307
Query: 463 -----------ILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+E ++EG Q +A+G +H V +
Sbjct: 308 GDNISRTNRTAPVEIPRLEGVQ-------HLAAGARHGVAV 341
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 181/417 (43%), Gaps = 58/417 (13%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP--QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
KV WG ND+ LG +G +P +V K + IS G + +DG +YA G
Sbjct: 2908 KVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACG- 2965
Query: 147 FRDSHGSMGLKGEGIQKTPLKL----ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
++G +GL TP ++ + V V + SG H + LT G + + G E G
Sbjct: 2966 -EGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3024
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG +R LE L+ K I D+ G ++ I+S G + +GL Y
Sbjct: 3025 KLGH-----GNRVTLEKPKLLE----SLRTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3075
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHD 319
+LG D+ Q P L+ +L + +A G +L L EG ++++G D
Sbjct: 3076 GRLGHGDNCTQ-------LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3128
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG + SE + P + L + I CG S A+ G ++ WG G+ Y+LG+G
Sbjct: 3129 FGKLG-RGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHG 3187
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+ + V +PTPI L+ K + +A G A+
Sbjct: 3188 TD---------------------------QHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3220
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G ++ WG + Q G+G +P + G L+ V +VA G HSV + P+
Sbjct: 3221 DSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLG--LDGVFVNRVACGSSHSVAWSLPQ 3275
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 42/357 (11%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
VL G D QLG L ++ T++ V + + G +++DGK+Y G
Sbjct: 2909 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACG--- 2965
Query: 98 EGALGREAEGDSEFIPQTVNLP------KKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
EG GR G + +P +P K V + +G H++AL DG V++WG D
Sbjct: 2966 EGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED-- 3023
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--- 206
G +G + P LES+ I IA G+ H +TS G L T G E G+LG
Sbjct: 3024 GKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3083
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSKGSILAFGLNNYS 262
TQ L+P V + H + V G + ++ +G + ++G ++
Sbjct: 3084 CTQ-------------LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFG 3130
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG SE C PH ++ L+ + G SLAL G+++ +G+ DY R
Sbjct: 3131 KLGRGGSE------GCS-VPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYR 3183
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LG + V +PTPI L+ K + +A G A+ G ++ WG + Q G+G
Sbjct: 3184 LG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSG 3239
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 171/414 (41%), Gaps = 74/414 (17%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G + G GQLG G D K E L + + + GG T+ +T DGK+Y
Sbjct: 3942 GASTIFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA 4000
Query: 93 WGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
G G DS P V ++ K V +++G H +AL DG V++WG
Sbjct: 4001 TGYGAGGR-LGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGE 4059
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G P +E++SGI V IA G+ H +TS+G++LT G +G+ GR
Sbjct: 4060 D--GKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWG---KGRYGR 4114
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ + L+P L+ + GV T I + L E
Sbjct: 4115 LGHGDSEDQ-------LQPKRCVLRTT----IMCGVGVTAI-------------MASLAE 4150
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
EV +P I+SL+ + G S+AL G +Y +G+ DY RLG
Sbjct: 4151 ---EVPMGAR----SPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4203
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
N ++ V P + +LQ K I SIA G+ A G ++ WG + QLG
Sbjct: 4204 N-TDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG--------- 4253
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+G + A R P + SLQ K I + CG+ + A+ +
Sbjct: 4254 -DGTVTAIQR-----------------PRLVQSLQGKHIVKVICGSAHTLALST 4289
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 156/342 (45%), Gaps = 50/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G+LGLG + R+ L + + V V GG H + LT DGKV++W
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3018
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G ++G LG E +L K ++ I+ G SHS A+ G +Y WG G
Sbjct: 3019 GEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGL-----G 3073
Query: 153 SMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLG 205
G G G T LK + V+ +V++A G+ + LT G + + G + G+LG
Sbjct: 3074 EYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3133
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTFISSKGSILAFG 257
RG S E VP + + ++ V GV ++ ++ G + +G
Sbjct: 3134 ------------RGGS--EGCSVPHQVERLNGV--GVVQIECGAQFSLALTKIGEVWTWG 3177
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG D V+K P I+ L KK +A G H LA+ G+++A+G
Sbjct: 3178 KGDYYRLGHGTDQHVRK--------PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWG 3229
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G N +P + L + +ACG+ S A
Sbjct: 3230 DNDHGQQGSGNTVVN-KKPNLVLGLDGVFVNRVACGSSHSVA 3270
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 176/447 (39%), Gaps = 99/447 (22%)
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL----KLESVSGIVKIASGAD 182
A D ++L +G + W FR ++ + I++ L LE +++IAS A
Sbjct: 3803 ASDMQLDSMLPNGDAHKWAWFRRYCSAVRVAQSLIRRVALPATFTLEVRKKLIEIASPAT 3862
Query: 183 HFVMLTSRGNLLTAGCP-----------EQGQLGRITQRSA---SRNARRGMSFLEPGEV 228
+ + TS +L ++ C Q +LG +T+ + S+ SF P
Sbjct: 3863 NPALPTSANSLTSSNCSLIQHTSSGSNLSQFELGVVTEIESIDTSKYVHEDHSFFTPQYD 3922
Query: 229 P-----LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
R+ D F+ +I +G N+ QLG D K C
Sbjct: 3923 SQLLQWFNRRPEDWAFSW------GGASTIFGWGHNHRGQLGGLDGSRIKMPTPC----- 3971
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
++LS + +A G+ A+ +GK+YA G + G ++ V+ PT + SLQ
Sbjct: 3972 --EALSLLRPIQIAGGEQTLYAVTPDGKLYATG-YGAGGRLGIGGTDSVSTPTLVESLQH 4028
Query: 344 KTITSIAC--GNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-----------------DI 384
I +A G A+ S+G ++ WG G +LG+G D DI
Sbjct: 4029 VIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDI 4088
Query: 385 ---------LNSEGKIYAFGRHDYGRLG----------------------------LKNV 407
+ S+G + +G+ YGRLG + ++
Sbjct: 4089 ACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASL 4148
Query: 408 SEPV----TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+E V P I SL + + CG+ S A+ G +Y WG G+ ++LG+G D +
Sbjct: 4149 AEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV 4208
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSV 490
P K+ L ++ +A+G H V
Sbjct: 4209 RRPKKVAA--LQGKKIISIATGSLHCV 4233
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 61/295 (20%)
Query: 168 LESVSGIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
LE VS +++IA+ + H + L+S G + + G E G+LG +AS+
Sbjct: 574 LEGVS-VIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGH--GDTASK----------- 619
Query: 226 GEVPLK---RKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
EVP K K + ++ G Y+ +SS G + +G Y +LG +S+ + F
Sbjct: 620 -EVPTKIALEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDK-------FV 671
Query: 282 PHLIKSLSDKKFT--MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P +++L K L SG HS+A+ G ++A+G D+G+LG + + P P+
Sbjct: 672 PTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCN---GSPLPVQ 728
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
++ I G+ S A+ +G LY WG G+G +LG+G
Sbjct: 729 IEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN------------------- 769
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
SE P + +L+ K I +A G+ A+ S G LYGWG N YQ
Sbjct: 770 --------SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGR-NDYQ 815
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 142/305 (46%), Gaps = 33/305 (10%)
Query: 64 LVEDLDNVVEVVVG----GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP 119
LVE L+ V + + G H + L+ G+VY+WG + G LG + S+ +P + L
Sbjct: 570 LVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLG-HGDTASKEVPTKIALE 628
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K+ I AG S+S A+ G ++ WG R ++G +G + P +++++ V
Sbjct: 629 KQVTAIYAGASYSAAVSSVGELFTWG--RGTYGRLGHGNSDDKFVPTQVQALKAYKVVDV 686
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-RKH 234
+ SG H + +T G L G + G+LG G P V ++
Sbjct: 687 ALGSGDAHSMAVTDGGLLFAWGDGDFGKLGN------------GSCNGSPLPVQIEGVSS 734
Query: 235 IDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ +++G ++ +S G++ ++G + +LG +SE P L+ +L KK
Sbjct: 735 VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSN-------VPKLVHALEGKKI 787
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACG 352
+A G H LAL S G++Y +GR+DY ++ VS +P+ + + I+ + CG
Sbjct: 788 VDVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSRDPIITTPLLTTPPTLRISGMTCG 847
Query: 353 NCVSF 357
S
Sbjct: 848 AAQSI 852
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 157/389 (40%), Gaps = 80/389 (20%)
Query: 140 TVYAWGSFRDSHGSMG-LKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
T++ WG + G +G L G I+ TP + S+ ++IA G +T G L G
Sbjct: 3945 TIFGWG--HNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4002
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGE-VPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G+LG S S + +E + V +K+ ++ G + +SS G + ++
Sbjct: 4003 YGAGGRLGIGGTDSVSTP-----TLVESLQHVIIKKVAVNS--GGKHCLALSSDGEVFSW 4055
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G +LG + + + P LI++LS +A G HS + S+G + +G
Sbjct: 4056 GEGEDGKLGHGNRD-------SYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWG 4108
Query: 317 RHDYGRLG----------------------------LKNVSEPV----TEPTPIPSLQDK 344
+ YGRLG + +++E V P I SL
Sbjct: 4109 KGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGL 4168
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ + CG+ S A+ G +Y WG G DY RLG
Sbjct: 4169 GVIKVECGSQFSVALTRSGSVYTWGKG--------------------------DYHRLGH 4202
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
N ++ V P + +LQ K I SIA G+ A G ++ WG + QLG+G I
Sbjct: 4203 GN-TDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQ 4261
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILA 493
P ++ L +++V G H++ L+
Sbjct: 4262 RPRLVQS--LQGKHIVKVICGSAHTLALS 4288
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
ISSK +L +GLN+ QLG K P LS K ++ G +
Sbjct: 2905 ISSK--VLVWGLNDKEQLGGLKGSKVK-------LPTYSSVLSQLKPIHISGGSKSLFIV 2955
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ +GK+YA G GRLGL + + V P +P L + +A +
Sbjct: 2956 SQDGKLYACGEGTNGRLGLGH-NNNVPTPRQVPILNQYVVKKVAVHS------------- 3001
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
GK L +GK++++G + G+LG N + +P + SL+ K I
Sbjct: 3002 -----------GGKHAMALTLDGKVFSWGEGEDGKLGHGN-RVTLEKPKLLESLRTKRIR 3049
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
IACG+ S AI S G LY WG+G +LG+G L+P + L + V+QVA G
Sbjct: 3050 DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LQGHRVVQVACGS 3107
Query: 487 QHSVIL 492
+ + L
Sbjct: 3108 RDAQTL 3113
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 38/241 (15%)
Query: 282 PHLIKSLSDKKFTMLASGQ--HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P L++ L +A+ H++AL+S G++Y++G + GRLG + + ++ P
Sbjct: 568 PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTA---SKEVPTK 624
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------- 383
+K +T+I G S A+ S G L+ WG G +LG+G DD
Sbjct: 625 IALEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVV 684
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ G ++A+G D+G+LG + + P P+ ++ I G
Sbjct: 685 DVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCN---GSPLPVQIEGVSSVARIYSG 741
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S A+ +G LY WG G+G +LG+G + P + L ++ VA G H +
Sbjct: 742 SQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHA--LEGKKIVDVAVGSAHCLA 799
Query: 492 L 492
L
Sbjct: 800 L 800
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 139/321 (43%), Gaps = 64/321 (19%)
Query: 37 GVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTW 93
G V + G+G+ G+LG G D +R L+E L VV++ G H+ C+T G V TW
Sbjct: 4050 GEVFSWGEGEDGKLGHGNRDSYDRPK--LIEALSGIGVVDIACGSAHSACITSQGHVLTW 4107
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G +G GR GDSE Q PK+ V + + G S +
Sbjct: 4108 G---KGRYGRLGHGDSEDQLQ----PKRCVL------RTTIMCGVGVTAIMASLAE-EVP 4153
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
MG ++P+K+ES++G ++K+ G+ V LT G++ T G + +LG
Sbjct: 4154 MG------ARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH----G 4203
Query: 212 ASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + RR P +V L+ K I + TG ++ S G + +G N+ QLG+
Sbjct: 4204 NTDHVRR------PKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTV 4257
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
T P L++SL K + G H+LAL++ +S
Sbjct: 4258 -------TAIQRPRLVQSLQGKHIVKVICGSAHTLALST-----------------YQLS 4293
Query: 330 EPVTEPTPIPSLQDKTITSIA 350
E V P P P L+ + IA
Sbjct: 4294 EAV-RPPPSPPLEYDLVRDIA 4313
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
C T G+V + G GD G+LG G P +ER VV++ G ++ L
Sbjct: 3114 CLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGV------GVVQIECGAQFSLAL 3167
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGT 140
T+ G+V+TWG D LG G + + + + KK + ++ G H +A+ + G
Sbjct: 3168 TKIGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQ 3224
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFV 185
V+AWG + HG G + K P + + G+ ++A G+ H V
Sbjct: 3225 VFAWGD--NDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSV 3269
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T GG++ G GD G+LG G +E + +V + G +V L+ DG +Y+W
Sbjct: 699 TDGGLLFAWGDGDFGKLGNG-SCNGSPLPVQIEGVSSVARIYSGSQFSVALSYDGTLYSW 757
Query: 94 GCNDEGALGREAEGDSEF--IPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWG 145
G +G GR G+SE +P+ V+ KK V ++ G +H +AL G +Y WG
Sbjct: 758 G---KGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V T G+GD +LG G D + R ++ + G +H V ++ G+V+T
Sbjct: 4184 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4243
Query: 93 WGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVAL 135
WG NDEG LG +G I P+ V K V++ G +H++AL
Sbjct: 4244 WGDNDEGQLG---DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4287
>gi|393244921|gb|EJD52432.1| RCC1/BLIP-II [Auricularia delicata TFB-10046 SS5]
Length = 544
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 166/405 (40%), Gaps = 88/405 (21%)
Query: 49 QLGLGPDVMERKTFALVEDLDNVVE-------------VVVGGMHTVCLTEDGKVYTWGC 95
QLGLG D L + VE VV G MHT+ + E+G++++WG
Sbjct: 111 QLGLGADTTSISRPRLHAWVKEAVEEDKLGGPGAGFEAVVSGAMHTLAIDEEGRMWSWGI 170
Query: 96 NDEGALGR------------------EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
NDEG LGR E E I + +AV+I+AG S SVAL +
Sbjct: 171 NDEGQLGRVTNDVEDPANPGQKLDKDELEATPALIQGLDHQDFRAVRIAAGGSVSVALSD 230
Query: 138 DGTVYAWGSFR-------DSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLT 188
+G V +WGSF+ DS G G Q TP + ++ V +A G DH + LT
Sbjct: 231 EGEVRSWGSFKWDGLLGFDS----GAPGPTRQFTPQVMPDLARYRFVSVACGQDHVLALT 286
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
+ G + + G E QLGR RNA L +HI + G +F
Sbjct: 287 TTGLVFSWGNGEDSQLGRRILDRRRRNALMADR--------LALRHIVYIAAGHNTSFAM 338
Query: 249 SK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD-----KKFTMLASGQHH 302
K G + A+GLN Y Q G D E N P +K+L ++ + S H
Sbjct: 339 DKDGVVYAWGLNGYGQTG-VDPEDGGDENVIEH-PTRVKALHPFVLGGRRVAQIVSANAH 396
Query: 303 SLALNSEGKIYAFGRHDYGRLGLK-----------------NVSEPVTEPTPIPSL---- 341
+L +G +Y GR+D +LGL + +P TE P P+L
Sbjct: 397 TLWRLEDGTLYGCGRNDEAQLGLAPNHPQAAEGRVRTPVHIRLPDPPTESDPNPALPAFS 456
Query: 342 -------QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
Q + S+A + A+ G +Y WG G +QL G
Sbjct: 457 AKDATGPQANKVVSMAASGWHNLAVSDAGNVYCWGWGANHQLALG 501
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 172/403 (42%), Gaps = 82/403 (20%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT---QRSASRNARRGMSFLEPGEV 228
+G + SGA H + + G + + G ++GQLGR+T + A+ + LE
Sbjct: 144 AGFEAVVSGAMHTLAIDEEGRMWSWGINDEGQLGRVTNDVEDPANPGQKLDKDELEATPA 203
Query: 229 PLKRKHIDDVFT------GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
++ D G + +S +G + ++G + L DS G T FTP
Sbjct: 204 LIQGLDHQDFRAVRIAAGGSVSVALSDEGEVRSWGSFKWDGLLGFDSGA--PGPTRQFTP 261
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
++ L+ +F +A GQ H LAL + G ++++G + +LG + + L
Sbjct: 262 QVMPDLARYRFVSVACGQDHVLALTTTGLVFSWGNGEDSQLGRRILDRRRRNALMADRLA 321
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLG----NGKEDDILN----------- 386
+ I IA G+ SFA+D +GV+Y WG+ NGY Q G +G +++++
Sbjct: 322 LRHIVYIAAGHNTSFAMDKDGVVYAWGL-NGYGQTGVDPEDGGDENVIEHPTRVKALHPF 380
Query: 387 ---------------------SEGKIYAFGRHDYGRLGLK-----------------NVS 408
+G +Y GR+D +LGL +
Sbjct: 381 VLGGRRVAQIVSANAHTLWRLEDGTLYGCGRNDEAQLGLAPNHPQAAEGRVRTPVHIRLP 440
Query: 409 EPVTEPTPIPSL-----------QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--L 455
+P TE P P+L Q + S+A + A+ G +Y WG G +Q L
Sbjct: 441 DPPTESDPNPALPAFSAKDATGPQANKVVSMAASGWHNLAVSDAGNVYCWGWGANHQLAL 500
Query: 456 GNGKEDDILEPMKIEGKQLNN-YTVLQVASGGQHSVILA-KPK 496
G E ++ P I+ LN+ + +L VA+G H +++A KP+
Sbjct: 501 GPSAEKQVV-PTMIKNTALNSGWKILDVATGSHHGILVAVKPE 542
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 168/344 (48%), Gaps = 37/344 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
+L T GG V CG+ +G+LGLGP + R T L + V GG H + LT
Sbjct: 473 SLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTY 532
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWG 145
DG VY+WG +EG LG + D+ + P+K ++ IS G SHS A+ GT+Y WG
Sbjct: 533 DGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWG 592
Query: 146 SFRDSHGSMGLKGEGIQKTPLK---LESVSG--IVKIASGAD--HFVMLTSRGNLLTAGC 198
HG G G G T LK ++++SG +V++A G+ + LT G + + G
Sbjct: 593 -----HGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGD 647
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFG 257
+ G+LG R G +P E L + + + G ++ +S G + +G
Sbjct: 648 GDFGKLG--------RGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVWTWG 698
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V++ P +++ L + K +A G H LA+ G+++A+G
Sbjct: 699 KGDYFRLGHGSDQHVRR--------PQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWG 750
Query: 317 RHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAI 359
+D+G+ G N V +P + L+ IT +ACG+ S A
Sbjct: 751 DNDHGQQG--NGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 179/413 (43%), Gaps = 55/413 (13%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGS 146
KV+ WG ND+ LG + + +L + K Q+ G A+ G VYA G
Sbjct: 429 AKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG- 487
Query: 147 FRDSHGSMGL---KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ G +GL G + T + + + SG H + LT G++ + G E+G+
Sbjct: 488 -ESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 546
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYS 262
LG R+ + R+ +F E K I D+ G ++ I S G++ +G Y
Sbjct: 547 LGH-GSRADALTPRKIETFPE--------KCIRDISCGSSHSAAIGSSGTLYTWGHGMYG 597
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDY 320
+LG + N P +++LS ++ +A G +L L +G +Y++G D+
Sbjct: 598 RLGHGN-------NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDF 650
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
G+LG + S+ P P+ L + + I CG S A+ G+++ WG G+ ++LG+G
Sbjct: 651 GKLG-RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS 709
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ + V P + L++ + +A G A+
Sbjct: 710 D---------------------------QHVRRPQVVEGLREHKVVDVAVGALHCLAVTE 742
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G ++ WG + Q GNG +PMK++G L + ++A G HS+ A
Sbjct: 743 GGQVFAWGDNDHGQQGNGGTTVNRKPMKVQG--LEGVKITKLACGSSHSIAFA 793
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 167/373 (44%), Gaps = 59/373 (15%)
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVM 186
D +++ + G+++ WG + G +G K P+ S++ + +++ G
Sbjct: 1396 DDWTLSWVGSGSIFGWG--HNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT 1453
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVY 243
+T G + G G+LG + S + + +E ++ HI V G +
Sbjct: 1454 VTGEGKVFATGYGAGGRLGIGSNESVAIP-----TLIES----IQHVHITQVSVNAGGKH 1504
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+S++G + ++G +LG + + P +I+SL +A+G HS
Sbjct: 1505 ILALSNEGEVYSWGEGVDGKLGHGN-------RSSLDHPRIIESLRGDLIVKVATGGSHS 1557
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN------CVSF 357
A+N+ G +Y +G+ YGRLG ++ SE +P + +L+D + +ACGN C++
Sbjct: 1558 AAINATGGLYTWGKGRYGRLGHED-SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITE 1616
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
V++ WG G DYG+LG + S+ P I
Sbjct: 1617 GTGGSSVVWSWGDG--------------------------DYGKLG-RGGSDGCKVPAII 1649
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
+L K IT +ACG+ S A+ G +Y WG G+ Y+LG+G ++ + P IE L
Sbjct: 1650 DTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIES--LRGM 1707
Query: 478 TVLQVASGGQHSV 490
V++V+ G H +
Sbjct: 1708 KVVEVSVGSLHCI 1720
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 39/294 (13%)
Query: 230 LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L+R + V G + F ++ G + A G + +LG S T P IK L
Sbjct: 459 LQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL 518
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+ + SG H++AL +G +Y++G + G+LG + ++ +T P I + +K I
Sbjct: 519 A------VHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALT-PRKIETFPEKCIRD 571
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL----------------------- 385
I+CG+ S AI S G LY WG G +LG+G +L
Sbjct: 572 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDA 631
Query: 386 -----NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+G +Y++G D+G+LG + S+ P P+ L + + I CG S A+
Sbjct: 632 QTLCLTQDGLVYSWGDGDFGKLG-RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSR 690
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G+++ WG G+ ++LG+G + + P +EG L + V+ VA G H + + +
Sbjct: 691 CGLVWTWGKGDYFRLGHGSDQHVRRPQVVEG--LREHKVVDVAVGALHCLAVTE 742
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 162/360 (45%), Gaps = 36/360 (10%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG GP+ + K L + + +VGG T+ +T +GKV+
Sbjct: 1404 GSGSIFGWGHNHRGQLG-GPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFA 1462
Query: 93 WGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G LG E+ I ++ V ++AG H +AL +G VY+WG D
Sbjct: 1463 TGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVD 1522
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G IVK+A+G H + + G L T G +G+ GR+
Sbjct: 1523 --GKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWG---KGRYGRL 1577
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVF--TGVYNTFISSKGS-----ILAFGLN 259
+ L+P V LK + DV G T ++G+ + ++G
Sbjct: 1578 GHEDSEDQ-------LKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1630
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+Y +LG S+ K P +I +L K T +A G SLAL+ G +Y +G+ D
Sbjct: 1631 DYGKLGRGGSDGCK-------VPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGD 1683
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
Y RLG E V P I SL+ + ++ G+ A G +Y WG + Q+G+G
Sbjct: 1684 YYRLG-HGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDG 1742
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 38/270 (14%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +GLN+ QLG K TP K L K T + G A+ GK+
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHK-------TPVASKDLQRLKVTQVIGGSKSLFAVTMGGKV 483
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
YA G GRLGL V+ V+ T + Q ++ G + A+ +G +Y WG G
Sbjct: 484 YACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGE 543
Query: 373 GYQLGNGKEDDILN--------------------------SEGKIYAFGRHDYGRLGLKN 406
+LG+G D L S G +Y +G YGRLG N
Sbjct: 544 EGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGN 603
Query: 407 VSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ + +P P+ +L + + +ACG + + + +G++Y WG G+ +LG G D
Sbjct: 604 -NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCC 662
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P +E +L+ V+++ G Q S+ L++
Sbjct: 663 VPKPVE--RLSGQDVVKIECGAQFSLALSR 690
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V G D QLG G + KT +DL V +V+ G +T GKVY G +
Sbjct: 431 VFVWGLNDKDQLG-GLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGES 489
Query: 97 DEGALGR-EAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG G + Q + P K + + +G H++AL DG VY+WG + G +
Sbjct: 490 TSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEE--GKL 547
Query: 155 GLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G TP K+E+ I I+ G+ H + S G L T G G+LG
Sbjct: 548 GHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNH-- 605
Query: 213 SRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FISSKGSILAFGLNNYSQLGEAD 268
+ L+P V L + + V G + ++ G + ++G ++ +LG
Sbjct: 606 --------TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGG 657
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
S+ C P ++ LS + + G SLAL+ G ++ +G+ DY RLG
Sbjct: 658 SD-----GCC--VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLG-HGS 709
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ V P + L++ + +A G A+ G ++ WG + Q GNG
Sbjct: 710 DQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNG 760
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 44/354 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCL 84
TL TG G V G G G+LG+G + L+E + +V V V GG H + L
Sbjct: 1450 TLFTVTGEGKVFATGYGAGGRLGIGSN-ESVAIPTLIESIQHVHITQVSVNAGGKHILAL 1508
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPK--KAVQISAGDSHSVALLEDGT 140
+ +G+VY+WG EG G+ G+ + P+ + + V+++ G SHS A+ G
Sbjct: 1509 SNEGEVYSWG---EGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGG 1565
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG-ADHFVMLTSRGN----- 192
+Y WG R +G +G + Q P + ++ +V +A G D + + G
Sbjct: 1566 LYTWGKGR--YGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSV 1623
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKG 251
+ + G + G+LGR + + + ++ L KHI V G ++ +S G
Sbjct: 1624 VWSWGDGDYGKLGR-----GGSDGCKVPAIID----TLMGKHITHVACGSQFSLALSKAG 1674
Query: 252 SILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ +G +Y +LG +D V++ P LI+SL K ++ G H +A G
Sbjct: 1675 GVYTWGKGDYYRLGHGSDEHVRR--------PKLIESLRGMKVVEVSVGSLHCIAAVDNG 1726
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSE 362
+Y +G +D G++G ++ P + +LQ I+ ++CG+ V++++ SE
Sbjct: 1727 DVYTWGDNDEGQIG-DGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSE 1779
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 3 HLLKKVLRKQAENPSQKVFVT--SEAVPTLKCKTGGGVVLTCGQGDTGQLGLG------- 53
H L K QA + Q V V S TL C T G+V + G GD G+LG G
Sbjct: 605 HTLLKPKPVQALSGQQVVQVACGSRDAQTL-CLTQDGLVYSWGDGDFGKLGRGGSDGCCV 663
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI- 112
P +ER + +VV++ G ++ L+ G V+TWG D LG G + +
Sbjct: 664 PKPVERLSG------QDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLG---HGSDQHVR 714
Query: 113 -PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
PQ V K V ++ G H +A+ E G V+AWG + HG G G + + P+K++
Sbjct: 715 RPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGD--NDHGQQGNGGTTVNRKPMKVQ 772
Query: 170 SVSG--IVKIASGADHFVML 187
+ G I K+A G+ H +
Sbjct: 773 GLEGVKITKLACGSSHSIAF 792
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 378 NGKEDDILNS---EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
N + DD S G I+ +G + G+LG ++ V P P PSL + G
Sbjct: 1392 NKRPDDWTLSWVGSGSIFGWGHNHRGQLGGPEGAK-VKIPIPCPSLAALKPIQLVGGEQT 1450
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
F + EG ++ G G G +LG G + + P IE Q + T + V +GG+H + L+
Sbjct: 1451 LFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALS 1509
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 168/344 (48%), Gaps = 37/344 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
+L T GG V CG+ +G+LGLGP + R T L + V GG H + LT
Sbjct: 474 SLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTY 533
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWG 145
DG VY+WG +EG LG + D+ + P+K ++ IS G SHS A+ GT+Y WG
Sbjct: 534 DGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWG 593
Query: 146 SFRDSHGSMGLKGEGIQKTPLK---LESVSG--IVKIASGAD--HFVMLTSRGNLLTAGC 198
HG G G G T LK ++++SG +V++A G+ + LT G + + G
Sbjct: 594 -----HGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGD 648
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFG 257
+ G+LG R G +P E L + + + G ++ +S G + +G
Sbjct: 649 GDFGKLG--------RGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVWTWG 699
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V++ P +++ L + K +A G H LA+ G+++A+G
Sbjct: 700 KGDYFRLGHGSDQHVRR--------PQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWG 751
Query: 317 RHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAI 359
+D+G+ G N V +P + L+ IT +ACG+ S A
Sbjct: 752 DNDHGQQG--NGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 179/413 (43%), Gaps = 55/413 (13%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGS 146
KV+ WG ND+ LG + + +L + K Q+ G A+ G VYA G
Sbjct: 430 AKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG- 488
Query: 147 FRDSHGSMGL---KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+ G +GL G + T + + + SG H + LT G++ + G E+G+
Sbjct: 489 -ESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 547
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYS 262
LG R+ + R+ +F E K I D+ G ++ I S G++ +G Y
Sbjct: 548 LGH-GSRADALTPRKIETFPE--------KCIRDISCGSSHSAAIGSSGTLYTWGHGMYG 598
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDY 320
+LG + N P +++LS ++ +A G +L L +G +Y++G D+
Sbjct: 599 RLGHGN-------NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDF 651
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
G+LG + S+ P P+ L + + I CG S A+ G+++ WG G+ ++LG+G
Sbjct: 652 GKLG-RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS 710
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ + V P + L++ + +A G A+
Sbjct: 711 D---------------------------QHVRRPQVVEGLREHKVVDVAVGALHCLAVTE 743
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G ++ WG + Q GNG +PMK++G L + ++A G HS+ A
Sbjct: 744 GGQVFAWGDNDHGQQGNGGTTVNRKPMKVQG--LEGVKITKLACGSSHSIAFA 794
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 167/373 (44%), Gaps = 59/373 (15%)
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVM 186
D +++ + G+++ WG + G +G K P+ S++ + +++ G
Sbjct: 1397 DDWTLSWVGSGSIFGWG--HNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT 1454
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVY 243
+T G + G G+LG + S + + +E ++ HI V G +
Sbjct: 1455 VTGEGKVFATGYGAGGRLGIGSNESVAIP-----TLIES----IQHVHITQVSVNAGGKH 1505
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+S++G + ++G +LG + + P +I+SL +A+G HS
Sbjct: 1506 ILALSNEGEVYSWGEGVDGKLGHGN-------RSSLDHPRIIESLRGDLIVKVATGGSHS 1558
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN------CVSF 357
A+N+ G +Y +G+ YGRLG ++ SE +P + +L+D + +ACGN C++
Sbjct: 1559 AAINATGGLYTWGKGRYGRLGHED-SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITE 1617
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
V++ WG G DYG+LG + S+ P I
Sbjct: 1618 GTGGSSVVWSWGDG--------------------------DYGKLG-RGGSDGCKVPAII 1650
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
+L K IT +ACG+ S A+ G +Y WG G+ Y+LG+G ++ + P IE L
Sbjct: 1651 DTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIES--LRGM 1708
Query: 478 TVLQVASGGQHSV 490
V++V+ G H +
Sbjct: 1709 KVVEVSVGSLHCI 1721
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 39/294 (13%)
Query: 230 LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L+R + V G + F ++ G + A G + +LG S T P IK L
Sbjct: 460 LQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL 519
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+ + SG H++AL +G +Y++G + G+LG + ++ +T P I + +K I
Sbjct: 520 A------VHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALT-PRKIETFPEKCIRD 572
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL----------------------- 385
I+CG+ S AI S G LY WG G +LG+G +L
Sbjct: 573 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDA 632
Query: 386 -----NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+G +Y++G D+G+LG + S+ P P+ L + + I CG S A+
Sbjct: 633 QTLCLTQDGLVYSWGDGDFGKLG-RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSR 691
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G+++ WG G+ ++LG+G + + P +EG L + V+ VA G H + + +
Sbjct: 692 CGLVWTWGKGDYFRLGHGSDQHVRRPQVVEG--LREHKVVDVAVGALHCLAVTE 743
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 162/360 (45%), Gaps = 36/360 (10%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG GP+ + K L + + +VGG T+ +T +GKV+
Sbjct: 1405 GSGSIFGWGHNHRGQLG-GPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFA 1463
Query: 93 WGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G LG E+ I ++ V ++AG H +AL +G VY+WG D
Sbjct: 1464 TGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVD 1523
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ G IVK+A+G H + + G L T G +G+ GR+
Sbjct: 1524 --GKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWG---KGRYGRL 1578
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVF--TGVYNTFISSKGS-----ILAFGLN 259
+ L+P V LK + DV G T ++G+ + ++G
Sbjct: 1579 GHEDSEDQ-------LKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1631
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+Y +LG S+ K P +I +L K T +A G SLAL+ G +Y +G+ D
Sbjct: 1632 DYGKLGRGGSDGCK-------VPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGD 1684
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
Y RLG E V P I SL+ + ++ G+ A G +Y WG + Q+G+G
Sbjct: 1685 YYRLG-HGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDG 1743
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 38/270 (14%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +GLN+ QLG K TP K L K T + G A+ GK+
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHK-------TPVASKDLQRLKVTQVIGGSKSLFAVTMGGKV 484
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
YA G GRLGL V+ V+ T + Q ++ G + A+ +G +Y WG G
Sbjct: 485 YACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGE 544
Query: 373 GYQLGNGKEDDILN--------------------------SEGKIYAFGRHDYGRLGLKN 406
+LG+G D L S G +Y +G YGRLG N
Sbjct: 545 EGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGN 604
Query: 407 VSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ + +P P+ +L + + +ACG + + + +G++Y WG G+ +LG G D
Sbjct: 605 -NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCC 663
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P +E +L+ V+++ G Q S+ L++
Sbjct: 664 VPKPVE--RLSGQDVVKIECGAQFSLALSR 691
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V G D QLG G + KT +DL V +V+ G +T GKVY G +
Sbjct: 432 VFVWGLNDKDQLG-GLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGES 490
Query: 97 DEGALGR-EAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG G + Q + P K + + +G H++AL DG VY+WG + G +
Sbjct: 491 TSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEE--GKL 548
Query: 155 GLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
G TP K+E+ I I+ G+ H + S G L T G G+LG
Sbjct: 549 GHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNH-- 606
Query: 213 SRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FISSKGSILAFGLNNYSQLGEAD 268
+ L+P V L + + V G + ++ G + ++G ++ +LG
Sbjct: 607 --------TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGG 658
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
S+ C P ++ LS + + G SLAL+ G ++ +G+ DY RLG
Sbjct: 659 SD-----GCC--VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLG-HGS 710
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ V P + L++ + +A G A+ G ++ WG + Q GNG
Sbjct: 711 DQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNG 761
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 44/354 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCL 84
TL TG G V G G G+LG+G + L+E + +V V V GG H + L
Sbjct: 1451 TLFTVTGEGKVFATGYGAGGRLGIGSN-ESVAIPTLIESIQHVHITQVSVNAGGKHILAL 1509
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPK--KAVQISAGDSHSVALLEDGT 140
+ +G+VY+WG EG G+ G+ + P+ + + V+++ G SHS A+ G
Sbjct: 1510 SNEGEVYSWG---EGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGG 1566
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG-ADHFVMLTSRGN----- 192
+Y WG R +G +G + Q P + ++ +V +A G D + + G
Sbjct: 1567 LYTWGKGR--YGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSV 1624
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKG 251
+ + G + G+LGR + + + ++ L KHI V G ++ +S G
Sbjct: 1625 VWSWGDGDYGKLGR-----GGSDGCKVPAIID----TLMGKHITHVACGSQFSLALSKAG 1675
Query: 252 SILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ +G +Y +LG +D V++ P LI+SL K ++ G H +A G
Sbjct: 1676 GVYTWGKGDYYRLGHGSDEHVRR--------PKLIESLRGMKVVEVSVGSLHCIAAVDNG 1727
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSE 362
+Y +G +D G++G ++ P + +LQ I+ ++CG+ V++++ SE
Sbjct: 1728 DVYTWGDNDEGQIG-DGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSE 1780
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 3 HLLKKVLRKQAENPSQKVFVT--SEAVPTLKCKTGGGVVLTCGQGDTGQLGLG------- 53
H L K QA + Q V V S TL C T G+V + G GD G+LG G
Sbjct: 606 HTLLKPKPVQALSGQQVVQVACGSRDAQTL-CLTQDGLVYSWGDGDFGKLGRGGSDGCCV 664
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI- 112
P +ER + +VV++ G ++ L+ G V+TWG D LG G + +
Sbjct: 665 PKPVERLSG------QDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLG---HGSDQHVR 715
Query: 113 -PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
PQ V K V ++ G H +A+ E G V+AWG + HG G G + + P+K++
Sbjct: 716 RPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGD--NDHGQQGNGGTTVNRKPMKVQ 773
Query: 170 SVSG--IVKIASGADHFVML 187
+ G I K+A G+ H +
Sbjct: 774 GLEGVKITKLACGSSHSIAF 793
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 378 NGKEDDILNS---EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
N + DD S G I+ +G + G+LG ++ V P P PSL + G
Sbjct: 1393 NKRPDDWTLSWVGSGSIFGWGHNHRGQLGGPEGAK-VKIPIPCPSLAALKPIQLVGGEQT 1451
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
F + EG ++ G G G +LG G + + P IE Q + T + V +GG+H + L+
Sbjct: 1452 LFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALS 1510
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 180/402 (44%), Gaps = 74/402 (18%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + ++A G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSIL 254
G + QLG + P +P L+ I + G ++ +S G +L
Sbjct: 65 GSNDHSQLGH------------DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVL 112
Query: 255 AFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N+ QLG A D E+ + P +++ L K +A G +HSLAL S G++Y
Sbjct: 113 SWGDNDCGQLGHATDKEIMQ-------LPKVVRQLVSKTVVQIACGNNHSLALTSCGELY 165
Query: 314 AFGRHDYGRLGLKNVSEPVTE---PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++G + YG+LG+ N + +T P + +L + +IACG SF I G ++GWG
Sbjct: 166 SWGSNIYGQLGV-NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224
Query: 371 GNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGL 404
N QLG E + L +EG ++ G YG+LG
Sbjct: 225 NNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG- 283
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDI 463
S P + L TIT +ACGN + A + S G +Y +G+G+ QLG +
Sbjct: 284 HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343
Query: 464 LEPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
+ P + G ++ + + Q+ SGG S++
Sbjct: 344 MLPQVVIGPWVSPSGSALLQSKDAKVSVVIRQIFSGGDQSIV 385
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PSQ + AV + C T G V CG D QLG D+ ++
Sbjct: 26 EQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLG--HDLPTKRPLL 83
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E D V+ ++ G H++ L++ G+V +WG ND G LG + + +P+ V + K
Sbjct: 84 IPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSK 143
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESVSGI--V 175
VQI+ G++HS+AL G +Y+WGS + +G +G+ K PL+L ++ GI
Sbjct: 144 TVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLA 201
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H +++ G + G GQLG T R+ + G+ F+ G+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGD-- 259
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++++G + G Y QLG S + P ++ L
Sbjct: 260 ------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMELM 300
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
T +A G H+LAL S G++YAFG G+LG ++
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRS 339
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P ++ V G +T F+++ G + A G N++SQLG D ++
Sbjct: 29 LTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGH-DLPTKR------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D ++ G HSLAL+ G++ ++G +D G+LG E + P +
Sbjct: 81 -PLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG D
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIP 199
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + PT + +L+ + +ACG
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY-PTQLKTLRTLGVRFVACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 316
Query: 492 LAKPK 496
L +
Sbjct: 317 LVPSR 321
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 159/384 (41%), Gaps = 58/384 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ D V +V G HT+ LT +GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVEQVACGHRHTLFLTANGK 60
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY G ND LG + IP+ + +QIS G HS+AL + G V +WG
Sbjct: 61 VYACGSNDHSQLGHDLPTKRPLLIPELQDY--VIIQISCGSRHSLALSDWGQVLSWGD-- 116
Query: 149 DSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G G K ++L V +V+IA G +H + LTS G L + G G
Sbjct: 117 ---NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG + + + + + +PL G ++ IS G++ +G NN
Sbjct: 174 QLGVNSPKDLT-HCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRNNCG 228
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG D E ++ P +K+L +A G S+ L +EG ++ G YG+
Sbjct: 229 QLGLND-ETNRA------YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG S P + L TIT +ACGN + A+
Sbjct: 282 LG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL----------------------- 317
Query: 383 DILNSEGKIYAFGRHDYGRLGLKN 406
+ S G++YAFG G+LG ++
Sbjct: 318 --VPSRGRVYAFGLGSSGQLGTRS 339
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ IP D + +ACG+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGH---------------- 49
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +D+ +LG P P IP LQD I I+
Sbjct: 50 ----------RHTLFLTANGKVYACGSNDHSQLG---HDLPTKRPLLIPELQDYVIIQIS 96
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG + QLG+ + +I++ K+ +QL + TV+Q+A G HS
Sbjct: 97 CGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKV-VRQLVSKTVVQIACGNNHS 155
Query: 490 VIL 492
+ L
Sbjct: 156 LAL 158
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 192/435 (44%), Gaps = 71/435 (16%)
Query: 91 YTWGCNDEGALGRE---AEGDSEFIPQTVNLP-----KKAVQISAGDSHSVALLEDGTVY 142
Y WG N +G LG + G+ +P + K V ++ HS+AL DGTVY
Sbjct: 135 YAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASDGTVY 194
Query: 143 AWGSFRD---SHGSMGLKGEGIQKTPLKLESV-----SGIVKIASGADHFVMLTSRGNLL 194
AWG + +GS GL + I K P+ ++ I+ IA+G +H + L S G +
Sbjct: 195 AWGYNANGQLGNGSGGLSTD-ISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASDGIVY 253
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSI 253
G +GQLG ++ +++ M+ G L K + + G ++ ++S G++
Sbjct: 254 AWGDNSEGQLG----DGSTTDSKVPMAVDRTGV--LTGKTVVAIAAGRNHSLAVASDGTV 307
Query: 254 LAFGLNNYSQLGE---ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
A+G N Y+QLG+ DS V P + L+ K +A G HSLA S+G
Sbjct: 308 YAWGDNYYAQLGDGSLTDSSVP--------VPVDLTELAGKSVADVAGGDRHSLAQASDG 359
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPI-----PSLQDKTITSIACGNCVSFAIDSEGVL 365
+YA+G + G++G ++ +P P+ +L KTI ++A G + A+ S+G +
Sbjct: 360 TVYAWGDNTNGQMG-DTIAH--LKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTV 416
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS---LQD 422
WG QLGN NS G E T P + S L
Sbjct: 417 CTWGYNYNGQLGN-------NSSGA-----------------GEKSTVPIAVNSYGALPG 452
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
KTI ++ G S A+ S+G L WG + QLG+ + P+ + L + L
Sbjct: 453 KTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDNSTTNRTVPVTVSAGGL-MFQALGT 511
Query: 483 ASGGQHSVILAKPKP 497
+S+ LA P
Sbjct: 512 TCDAVYSLALATVPP 526
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 139/322 (43%), Gaps = 39/322 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--------NVVEVVVGGMHTVCLTEDG 88
G V G GQLG G + + +D ++ + G H++ L DG
Sbjct: 191 GTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASDG 250
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLP-----KKAVQISAGDSHSVALLEDGTVYA 143
VY WG N EG LG + DS+ +P V+ K V I+AG +HS+A+ DGTVYA
Sbjct: 251 IVYAWGDNSEGQLGDGSTTDSK-VPMAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYA 309
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG + G + P+ L ++G + +A G H + S G + G
Sbjct: 310 WGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASDGTVYAWGDNTN 369
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEV------PLKRKHIDDVFTGVY-NTFISSKGSIL 254
GQ+G ++ L+P V L K I V G Y N ++S G++
Sbjct: 370 GQMGDT------------IAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVC 417
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G N QLG S + +T + +L K + +G HSLAL S+G +
Sbjct: 418 TWGYNYNGQLGNNSSGAGEK-STVPIAVNSYGALPGKTIVAVGAGVSHSLALASDGALCT 476
Query: 315 FGRHDYGRLG---LKNVSEPVT 333
+G + G+LG N + PVT
Sbjct: 477 WGFNSQGQLGDNSTTNRTVPVT 498
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVN----LP-KKA 122
+V V GG H + L DG V TWG N G LG + G E +P VN LP K
Sbjct: 396 TIVAVAAGGYHNLALASDGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTI 455
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
V + AG SHS+AL DG + WG +S G +G + P+ + +
Sbjct: 456 VAVGAGVSHSLALASDGALCTWG--FNSQGQLGDNSTTNRTVPVTVSA 501
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 469 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 527
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 528 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 587
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 588 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 646
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 647 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 704
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 705 VAAGSTHCLALTE 717
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 446 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 495
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 496 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 537
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 538 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 590
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 591 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 649
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 650 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 709
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 710 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 767
Query: 439 DS 440
S
Sbjct: 768 SS 769
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 541
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 542 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 599
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 600 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 648
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 701
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 702 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 759
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 760 GPAQSFAWSS 769
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 612 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 665
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 666 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725
Query: 146 S 146
S
Sbjct: 726 S 726
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 558 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 616
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 617 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 673
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 674 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 732
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 733 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 778
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 505 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 562
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 563 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 621
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 622 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 679
Query: 204 LGRITQ 209
LG T+
Sbjct: 680 LGHGTE 685
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 31/295 (10%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V + G +GQLG G + + V L ++ +V GG H + L G+VY+WG N
Sbjct: 102 TVKSWGHNSSGQLGNGGNT-NQTVPTTVPRLTDIKDVAAGGKHALALDTSGQVYSWGDNS 160
Query: 98 EGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G LG GDS +P V K QISAG S+ALLE+G VYAWG R HG +G
Sbjct: 161 YGQLGNNRTGDSRTVPDRVQGMPKVKQISAGCDFSLALLENGKVYAWG--RGIHGQLGTG 218
Query: 158 GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
P +++ + IV+I +G H + LT+ + + G GQLG + +S++
Sbjct: 219 NRATSSVPRQVQGLENIVEIDAGCYHALALTADDTVKSWGYNLYGQLGNSSTKSST---- 274
Query: 218 RGMSFLEPGEVPLKRKHID---DVFTGVYNTFI-SSKGSILAFGLNNYSQLGEA----DS 269
+P+ I+ D+ G ++ ++ +S + +G N Y QL E+ D+
Sbjct: 275 ----------LPVDVDWIEGVSDIEAGAFHNYVKTSDSHVWGWGNNQYGQLLESDEAFDA 324
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
V ++ T P I L + LA+G H +A+ ++ ++ +G + G+LG
Sbjct: 325 NVSRTNRTA---PVEIPRL--EGVQHLAAGARHGVAVTAD-DVFTWGHNGEGQLG 373
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 56/399 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAG---DSHSVALLE-DGTVYAW 144
V +WG G LG DS +L + V Q+SAG + S AL D TV +W
Sbjct: 47 VLSWGAGRTGQLGNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALARTDKTVKSW 106
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G +S G +G G Q P + ++ I +A+G H + L + G + + G GQL
Sbjct: 107 G--HNSSGQLGNGGNTNQTVPTTVPRLTDIKDVAAGGKHALALDTSGQVYSWGDNSYGQL 164
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
G N R G S P V K + + G ++ + G + A+G + Q
Sbjct: 165 G---------NNRTGDSRTVPDRVQGMPK-VKQISAGCDFSLALLENGKVYAWGRGIHGQ 214
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG + P ++ L + + +G +H+LAL ++ + ++G + YG+L
Sbjct: 215 LGTGNRATSS-------VPRQVQGL--ENIVEIDAGCYHALALTADDTVKSWGYNLYGQL 265
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + ++ T P + ++ ++ I G ++ S+ ++GWG N +
Sbjct: 266 G-NSSTKSSTLPVDVDWIEG--VSDIEAGAFHNYVKTSDSHVWGWG--------NNQYGQ 314
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+L S+ A NVS T P IP L+ + +A G A+ ++
Sbjct: 315 LLESDEAFDA------------NVSRTNRTAPVEIPRLEG--VQHLAAGARHGVAVTADD 360
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKI--EGKQLNNYTV 479
V + WG QLGNG E +KI EG + N V
Sbjct: 361 V-FTWGHNGEGQLGNGTTVARYESVKILNEGSAIKNVAV 398
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 50/252 (19%)
Query: 252 SILAFGLNNYSQLGE---ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG---QHHSLA 305
++L++G QLG +DS +P + SL +++G S A
Sbjct: 46 TVLSWGAGRTGQLGNGTLSDS----------LSPSSVTSLFRGDVDQMSAGGTSSADSFA 95
Query: 306 L-NSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
L ++ + ++G + G+LG N ++ V PT +P L D I +A G + A+D+ G
Sbjct: 96 LARTDKTVKSWGHNSSGQLGNGGNTNQTV--PTTVPRLTD--IKDVAAGGKHALALDTSG 151
Query: 364 VLYGWGMGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHD 398
+Y WG + QLGN + D L GK+YA+GR
Sbjct: 152 QVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPKVKQISAGCDFSLALLENGKVYAWGRGI 211
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+G+LG N + + P + L++ I I G + A+ ++ + WG QLGN
Sbjct: 212 HGQLGTGNRATS-SVPRQVQGLEN--IVEIDAGCYHALALTADDTVKSWGYNLYGQLGNS 268
Query: 459 KEDDILEPMKIE 470
P+ ++
Sbjct: 269 STKSSTLPVDVD 280
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG---NCVSFAI-DSEGVLYG 367
+ ++G G+LG +S+ ++ P+ + SL + ++ G + SFA+ ++ +
Sbjct: 47 VLSWGAGRTGQLGNGTLSDSLS-PSSVTSLFRGDVDQMSAGGTSSADSFALARTDKTVKS 105
Query: 368 WGMGNGYQLGNG------------KEDDI------------LNSEGKIYAFGRHDYGRLG 403
WG + QLGNG + DI L++ G++Y++G + YG+LG
Sbjct: 106 WGHNSSGQLGNGGNTNQTVPTTVPRLTDIKDVAAGGKHALALDTSGQVYSWGDNSYGQLG 165
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ T P + + + I+ G S A+ G +Y WG G QLG G
Sbjct: 166 NNRTGDSRTVPDRVQGM--PKVKQISAGCDFSLALLENGKVYAWGRGIHGQLGTGNRATS 223
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P +++G + ++++ +G H++ L
Sbjct: 224 SVPRQVQGLE----NIVEIDAGCYHALAL 248
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 440 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 498
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 499 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 558
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 559 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 617
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 618 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 675
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 676 VAAGSTHCLALTE 688
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 417 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 466
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 467 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 508
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 509 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 561
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 562 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 620
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 621 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 680
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 681 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 738
Query: 439 DS 440
S
Sbjct: 739 SS 740
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 456 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 512
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 513 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 570
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 571 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 619
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 620 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 672
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 673 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 730
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 731 GPAQSFAWSS 740
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 583 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 636
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 637 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 696
Query: 146 S 146
S
Sbjct: 697 S 697
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 529 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 587
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 588 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 644
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 645 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 703
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 704 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 749
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 476 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 533
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 534 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 592
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 593 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 650
Query: 204 LGRITQ 209
LG T+
Sbjct: 651 LGHGTE 656
>gi|408500677|ref|YP_006864596.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465501|gb|AFU71030.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1082
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 180/431 (41%), Gaps = 54/431 (12%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK------KA 122
+++ VV+ ++ + DG Y WG N G LG + P V P
Sbjct: 565 NSIGSVVMQNSVSLAVGSDGNAYAWGDNRSGQLG-NGMTTQQNTPVQVKKPAGVSADFTY 623
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSG-------- 173
VQ+SAG HS+AL DG VYAWG +++ +G G T P+++ S
Sbjct: 624 VQVSAGYRHSLALGSDGYVYAWGD--NTYAQLGNNTSGGYSTVPVRVCDPSTHSNVNTGL 681
Query: 174 -IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
+++ +G +H + + GN+ G GQLG T S S R P +
Sbjct: 682 KAIQVDAGGEHSLAIDKEGNVWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEHPTDASKGL 741
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK- 291
+ G ++ I G A+G N+Y QLG + V + P ++ ++
Sbjct: 742 VALKVAGGGAHSLAIDRDGDTWAWGFNSYGQLG---NNVTSGFDGANPVPVRVRDPNNPD 798
Query: 292 ------KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
K +++G HS+A++++G +++G + +G LG +E + P + + + +
Sbjct: 799 DTSKNLKSVQISAGFEHSIAIDAQGNTWSWGWNYWGELGQNTTNEDILSPARVYNPDNPS 858
Query: 346 I----TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR 401
I + ++ G S A+D G+ + WG QLG DD G
Sbjct: 859 IPFKASQVSAGYDTSLAVDINGIAWSWGRNTYGQLGYTNYDD--------------SRGH 904
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITS--IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
V P + P+ D ++ S ++ GN S AI +G YGWG QLGN
Sbjct: 905 NQPAKVRNPAS-----PNNTDLSLDSTLVSAGNWHSLAIGKDGYTYGWGYNKYGQLGNNS 959
Query: 460 EDDILEPMKIE 470
+ PM +E
Sbjct: 960 NKNAYVPMLVE 970
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V K K + ++ +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 180/410 (43%), Gaps = 90/410 (21%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + ++A G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI-----DDVFTGV-----YNTF 246
G + QLG E+P KR + D V + ++
Sbjct: 65 GSNDHSQLGH--------------------ELPTKRPLLIPELQDYVVIQISCGSRHSLA 104
Query: 247 ISSKGSILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+S G +L++G N+ QLG A D E+ + P +++ L K +A G +HSLA
Sbjct: 105 LSEWGQVLSWGDNDCGQLGHATDKEIVQ-------LPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTE---PTPIPSLQDKTITSIACGNCVSFAIDSE 362
L S G++Y++G + YG+LG+ N + +T P + +L + +IACG SF I
Sbjct: 158 LTSCGELYSWGSNIYGQLGV-NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Query: 363 GVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGR 396
G ++GWG N QLG E + L +EG ++ G
Sbjct: 217 GAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGA 276
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQL 455
YG+LG S P + L TIT +ACGN + A + S G +Y +G+G+ QL
Sbjct: 277 GAYGQLG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335
Query: 456 GNGKEDDILEPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
G ++ P + G ++ + + Q+ SGG S++
Sbjct: 336 GTRSTKSLMLPQVVIGPWVSPSGSALLQSNDAKVSVVIRQIFSGGDQSIV 385
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 53/342 (15%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PSQ + AV + C T G V CG D QLG + K
Sbjct: 26 EQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLG---HELPTKRPL 82
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LP 119
L+ +L + V+++ G H++ L+E G+V +WG ND G LG + + +P+ V +
Sbjct: 83 LIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVS 142
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESVSGI-- 174
K VQI+ G++HS+AL G +Y+WGS + +G +G+ K PL+L ++ GI
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPKDLTHCNYPLRLTTLLGIPL 200
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLG--------RITQRSASRNARRGMSFLEPG 226
IA G +H +++ G + G GQLG TQ R G+ F+ G
Sbjct: 201 AAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTL--GVRFVACG 258
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
+ ++ F++++G + G Y QLG S + P ++
Sbjct: 259 D--------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVM 297
Query: 287 SLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
L T +A G H+LAL S G++YAFG G+LG ++
Sbjct: 298 ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRS 339
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P + V G +T F+++ G + A G N++SQLG +
Sbjct: 29 LTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKR-------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D ++ G HSLAL+ G++ ++G +D G+LG E V P +
Sbjct: 81 -PLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG D
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIP 199
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + PT + +L+ + +ACG
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAY-PTQLKTLRTLGVRFVACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 316
Query: 492 LAKPK 496
L +
Sbjct: 317 LVPSR 321
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 158/384 (41%), Gaps = 58/384 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ D V +V G HT+ LT +GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTANGK 60
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY G ND LG E IP+ + +QIS G HS+AL E G V +WG
Sbjct: 61 VYACGSNDHSQLGHELPTKRPLLIPELQDY--VVIQISCGSRHSLALSEWGQVLSWGD-- 116
Query: 149 DSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G G K ++L V +V+IA G +H + LTS G L + G G
Sbjct: 117 ---NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG + + + + + +PL G ++ IS G++ +G NN
Sbjct: 174 QLGVNSPKDLT-HCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRNNCG 228
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG D N + P +K+L +A G S+ L +EG ++ G YG+
Sbjct: 229 QLGLNDE-----ANRAY--PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG S P + L TIT +ACGN + A+
Sbjct: 282 LG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL----------------------- 317
Query: 383 DILNSEGKIYAFGRHDYGRLGLKN 406
+ S G++YAFG G+LG ++
Sbjct: 318 --VPSRGRVYAFGLGSSGQLGTRS 339
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ IP D + +ACG+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGH---------------- 49
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +D+ +LG + P P IP LQD + I+
Sbjct: 50 ----------RHTLFLTANGKVYACGSNDHSQLGHE---LPTKRPLLIPELQDYVVIQIS 96
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG + QLG+ + +I++ K+ +QL + TV+Q+A G HS
Sbjct: 97 CGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVV-RQLVSKTVVQIACGNNHS 155
Query: 490 VIL 492
+ L
Sbjct: 156 LAL 158
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 161/366 (43%), Gaps = 45/366 (12%)
Query: 13 AENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALV 65
AE+ S FV ++ V + C G V G+ D GQLG G + K L
Sbjct: 24 AEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCL- 82
Query: 66 EDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV--NLPK- 120
+ L + V G HT+ TE K++ +GCN +G LG + D ++PQ + +L K
Sbjct: 83 KSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGV-GDLDDRWVPQMISTDLEKT 141
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ +SAG HS L E+G+VY WG +S G G+K E P K+E + I I+
Sbjct: 142 NNIIALSAGCHHSAFLTEEGSVYIWGD--NSDGQCGIKNENYLLNPRKIEFQNPINSISC 199
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP----LKRKHI 235
G H + S G + T G + G+LGR + P +VP L I
Sbjct: 200 GYYHTAFI-SLGKVYTFGEDDNGKLGRSDKL--------------PNDVPEGVELDENCI 244
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
G + ++ G AFG N QLG + E + F P + + +D+ +
Sbjct: 245 SVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETE------FSIPQRV-NFTDENVNL 297
Query: 296 L--ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+ G+ HS L EGK+Y G G+L ++ S + PT I + T ++CG
Sbjct: 298 IYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGG 357
Query: 354 CVSFAI 359
C + +
Sbjct: 358 CHTMVL 363
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 160/379 (42%), Gaps = 60/379 (15%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL----PKKAVQ 124
D V E+ G HT + + G+V+ +G ND G LG G ++ + + L P +++
Sbjct: 36 DPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGF---GHTKIVNKPSCLKSLKPFQSIH 92
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP----LKLESVSGIVKIASG 180
++ G SH++ E ++A+G +S G +G+ + P LE + I+ +++G
Sbjct: 93 VACGKSHTLISTECNKIFAFGC--NSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAG 150
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H LT G++ G GQ G I + N R+ + F P I+ +
Sbjct: 151 CHHSAFLTEEGSVYIWGDNSDGQCG-IKNENYLLNPRK-IEFQNP---------INSISC 199
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G Y+T S G + FG ++ +LG +D K N P ++ D+ + G
Sbjct: 200 GYYHTAFISLGKVYTFGEDDNGKLGRSD----KLPND---VPEGVEL--DENCISVKCGG 250
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP-SLQDKTITSIACGNCVSFAI 359
H++ L GK YAFG + G+LGL N + P + + ++ + + CG S
Sbjct: 251 SHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHS--- 307
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
L EGK+Y G G+L ++ S + PT I
Sbjct: 308 -----------------------AFLTDEGKLYTCGDGRNGKLCNEDESTNICTPTTIEM 344
Query: 420 LQDKTITSIACGNCVSFAI 438
+ T ++CG C + +
Sbjct: 345 FKSFFCTYVSCGGCHTMVL 363
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 153/354 (43%), Gaps = 59/354 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG----RITQRSASRNARRGMSFLEPGEVP 229
+ +I+ G +H ++ G + G + GQLG +I + + + + P
Sbjct: 38 VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLK----------P 87
Query: 230 LKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
+ H V G +T IS++ I AFG N+ QLG D + + + P +I +
Sbjct: 88 FQSIH---VACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDR-------WVPQMISTD 137
Query: 289 SDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+K ++A +G HHS L EG +Y +G + G+ G+KN + P I Q+ I
Sbjct: 138 LEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGIKN-ENYLLNPRKIE-FQN-PI 194
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------------------GKED 382
SI+CG A S G +Y +G + +LG G
Sbjct: 195 NSISCGY-YHTAFISLGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDENCISVKCGGSHT 253
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP-SLQDKTITSIACGNCVSFAIDSE 441
IL GK YAFG + G+LGL N + P + + ++ + + CG S + E
Sbjct: 254 IILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDE 313
Query: 442 GVLYGWGMGNGYQLGNGKED-DILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G LY G G +L N E +I P IE ++ V+ GG H+++LAK
Sbjct: 314 GKLYTCGDGRNGKLCNEDESTNICTPTTIE--MFKSFFCTYVSCGGCHTMVLAK 365
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 181/427 (42%), Gaps = 72/427 (16%)
Query: 89 KVYTWGCNDEGALG------REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
KV+ WG ND+ LG + SEFI K QI+ G A+ DG V+
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGAL-----KVQQIAGGSKTLFAVSHDGKVF 2476
Query: 143 AWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGI----VKIASGADHFVMLTSRGNLLTAG 197
A G ++G +GL T P ++E++S V + SG H + LT G L + G
Sbjct: 2477 ACGE--STNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWG 2534
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILA 255
E G+LG + M+ P + K + D+ G ++ I S G +
Sbjct: 2535 EGEDGKLGHGNR----------MNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYT 2584
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIY 313
+GL Y +LG D N P ++S + + +A G +LAL +G ++
Sbjct: 2585 WGLGEYGRLGHGD-------NYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVW 2637
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
++G D+G+LG + SE + P P+ LQ + + +ACG S A+ + G+++ WG G
Sbjct: 2638 SWGDGDFGKLG-RGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKG-- 2694
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
DY RLG N + V +P + L+ K I +A G
Sbjct: 2695 ------------------------DYYRLGHGNDTH-VRKPQIVDGLRGKKIVDVAVGAL 2729
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
A+ G ++ WG + Q GN P + G L + +VA G HS+ A
Sbjct: 2730 HCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNG--LEGQKITRVACGSSHSIAWA 2787
Query: 494 K---PKP 497
+ P P
Sbjct: 2788 ESDLPTP 2794
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 32/219 (14%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H LAL EG++Y++G D G+LG + S P EPT + L K + I+CG+ S A+ S
Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGHGDTS-PREEPTLVTGLAGKQVIRISCGSTHSAAVTS 86
Query: 362 EGVLYGWGMGNGYQLGNGKEDDIL----------------------------NSEGKIYA 393
EG LY WG GN +LG+G +D L +G +++
Sbjct: 87 EGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWS 146
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G DYG+LG + S+ P I LQ + + CG S A+ +G ++ WG G G+
Sbjct: 147 WGDGDYGKLG-RGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGF 205
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+LG+G ED + P +E L+ V+ V+ G H + L
Sbjct: 206 RLGHGTEDHVRHPKLVEA--LDGKHVVDVSVGSIHCLAL 242
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 162/345 (46%), Gaps = 39/345 (11%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCL 84
TL + G V CG+ G+LGLGP +E+L + V V GG H + L
Sbjct: 2465 TLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMAL 2524
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVY 142
T +GK+++WG ++G LG + + P+ ++ K + +S G SHS A+L G +Y
Sbjct: 2525 TIEGKLFSWGEGEDGKLGHGNRMNCDH-PKLIDTFKSSCVRDMSCGSSHSAAILSSGELY 2583
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLT 195
WG G G G G T LK + V ++ IA G+ + LT G + +
Sbjct: 2584 TWGL-----GEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWS 2638
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSIL 254
G + G+LGR G S P E L+ + + V G ++ +S+ G +
Sbjct: 2639 WGDGDFGKLGR--------GGSEGCSVPNPVE-KLQGQGVCKVACGAQFSLALSTSGLVW 2689
Query: 255 AFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G +Y +LG D+ V+K P ++ L KK +A G H LA+ G+++
Sbjct: 2690 TWGKGDYYRLGHGNDTHVRK--------PQIVDGLRGKKIVDVAVGALHCLAVTDSGQVF 2741
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
A+G +D+G+ G N + P + L+ + IT +ACG+ S A
Sbjct: 2742 AWGDNDHGQQG-NNTTTVNRRPQLVNGLEGQKITRVACGSSHSIA 2785
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 182/422 (43%), Gaps = 64/422 (15%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +PQT+ + VQI G+ A+ +G VYA
Sbjct: 3354 GTIYGWGHNHRGQLG-SLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA-- 3410
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ G +GL G + LES+ +V K+A SG H + L++ G++ + G +
Sbjct: 3411 TGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDD 3470
Query: 202 GQLGRITQRSASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
G+LG + S R A RG ID G ++ I+ + +G
Sbjct: 3471 GKLGHGNRNSCDRPRVIEALRGKGV------------IDISCGGSHSACITQNHELYTWG 3518
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAF 315
Y +LG DSE Q P ++++L + +A SG +L L + ++++
Sbjct: 3519 KGRYGRLGHGDSEDQ-------LLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSW 3571
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G DYG+LG + S+ P + SL ++ + CG+ S A+ G +Y WG G
Sbjct: 3572 GDGDYGKLG-RGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKG---- 3626
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
DY RLG V + V P + +LQ K + +IA G+
Sbjct: 3627 ----------------------DYYRLG-HGVDDHVRRPKRVAALQGKKVITIATGSLHC 3663
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
A G +Y WG + QLG+G + I P + L + +VA G H++ +
Sbjct: 3664 VASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTA--LQGKKISRVACGSAHTIAWSTC 3721
Query: 496 KP 497
KP
Sbjct: 3722 KP 3723
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 146/328 (44%), Gaps = 57/328 (17%)
Query: 163 KTPLKLESVSG---IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
+ P +LE +S IV++ + D HF+ LT G + + G + G+LG + R
Sbjct: 3 QPPAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGH-----GDTSPR 57
Query: 218 RGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
EP V L K + + G ++ ++S+G + +G NY +LG SE Q
Sbjct: 58 E-----EPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQ--- 109
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
P L+ L +A SG H+LA +G ++++G DYG+LG + S+
Sbjct: 110 ----LVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLG-RGGSDGCK 164
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------- 384
P I LQ + + CG S A+ +G ++ WG G G++LG+G ED +
Sbjct: 165 NPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEAL 224
Query: 385 -----------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
L G++Y +GR+D G+LG + + EPT + L K I
Sbjct: 225 DGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDC-QIRPEPTLVSGLASKGIVG 283
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQL 455
IACG SFA G W +G Q
Sbjct: 284 IACGPAQSFAWSCAG---QWSVGTRLQF 308
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 143/315 (45%), Gaps = 30/315 (9%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQIS 126
+V+VV G H + LT +G+VY+WG D G LG E L K+ ++IS
Sbjct: 16 EIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRIS 75
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGAD 182
G +HS A+ +G +Y WG R ++G +G Q P+ + + G I+ +A SG
Sbjct: 76 CGSTHSAAVTSEGELYTWG--RGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDA 133
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H + G + + G + G+LGR S + S L+ + V+ G
Sbjct: 134 HTLAAADDGTVWSWGDGDYGKLGR----GGSDGCKNPKSIER-----LQGLGVCKVYCGA 184
Query: 243 -YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ ++ GS+ +G +LG + + P L+++L K ++ G
Sbjct: 185 QFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRH-------PKLVEALDGKHVVDVSVGSI 237
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H LAL G++Y +GR+D G+LG + + EPT + L K I IACG SFA
Sbjct: 238 HCLALTDAGEVYCWGRNDQGQLGDIDC-QIRPEPTLVSGLASKGIVGIACGPAQSFAWSC 296
Query: 362 EGVLYGWGMGNGYQL 376
G W +G Q
Sbjct: 297 AG---QWSVGTRLQF 308
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 171/370 (46%), Gaps = 49/370 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D R+ LV L V+ + G H+ +T +G++Y
Sbjct: 33 TREGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELY 91
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSF 147
TWG + G LG + D + +P V+ + V +GD+H++A +DGTV++WG
Sbjct: 92 TWGRGNYGRLGHGSSED-QLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGD- 149
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G K P +E + G+ K+ GA + LT G++ T G E +LG
Sbjct: 150 -GDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLG 208
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQL 264
T+ + R +E L KH+ DV G ++ ++ G + +G N+ QL
Sbjct: 209 HGTE-----DHVRHPKLVE----ALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQL 259
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG-------- 316
G+ D +++ P L+ L+ K +A G S A + G+ ++ G
Sbjct: 260 GDIDCQIRPE-------PTLVSGLASKGIVGIACGPAQSFAWSCAGQ-WSVGTRLQFCVD 311
Query: 317 --RHDYGRLG--LKNVSEPVT--EPTPIPSLQDKTITSIACGNCVSF----AIDSEGVLY 366
+ + L L+ VSE +T + P P Q+K +++ N + AI + V
Sbjct: 312 VCKRTFEHLDALLRRVSEDLTGSQDWPPPP-QEKECIAVSALNLLRLQLHAAITEDVVAA 370
Query: 367 GWGMGNGYQL 376
G+G G +L
Sbjct: 371 ELGLGVGSKL 380
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 47/317 (14%)
Query: 61 TFALVEDLDNVV----EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
+ ++E L +VV V GG H + L+ DG VY+WG D+G LG + P+ +
Sbjct: 3429 SIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDR-PRVI 3487
Query: 117 NLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG- 173
K + IS G SHS + ++ +Y WG R +G +G Q P +E++ G
Sbjct: 3488 EALRGKGVIDISCGGSHSACITQNHELYTWGKGR--YGRLGHGDSEDQLLPKVVEALRGN 3545
Query: 174 -IVKIA--SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
++ +A SG + LT + + G + G+LG RG S + ++P+
Sbjct: 3546 RVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLG------------RGGS--DGCKIPM 3591
Query: 231 KRKHIDDVFTGV--------YNTFISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFT 281
K + + + GV ++ ++ G++ +G +Y +LG D V++
Sbjct: 3592 KVESL--IGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRR-------- 3641
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P + +L KK +A+G H +A G++Y +G +D G+LG + + P + +L
Sbjct: 3642 PKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG-DGTTNAIARPRLVTAL 3700
Query: 342 QDKTITSIACGNCVSFA 358
Q K I+ +ACG+ + A
Sbjct: 3701 QGKKISRVACGSAHTIA 3717
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 172/414 (41%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG + + K +E L ++ V +VGG T+ +T +GKVY
Sbjct: 3352 GSGTIYGWGHNHRGQLG-SLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA 3410
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK---KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G LG I +L + V + +G H++AL DG VY+WG D
Sbjct: 3411 TGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDD 3470
Query: 150 SHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +E++ G++ I+ G H +T L T G +G+ GR+
Sbjct: 3471 --GKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWG---KGRYGRL 3525
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L P V L+ + DV G ++ + ++G +Y +
Sbjct: 3526 GHGDSEDQ-------LLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGK 3578
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P ++SL + + G S+AL G +Y +G+ DY RL
Sbjct: 3579 LGRGGSDGCK-------IPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRL 3631
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G V + V P + +LQ K + +IA G+ A G +Y WG + QLG+G
Sbjct: 3632 G-HGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDG---- 3686
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K I+ +ACG+ + A
Sbjct: 3687 -----------------------TTNAIARPRLVTALQGKKISRVACGSAHTIA 3717
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+GK L EG++Y++G D G+LG + S P EPT + L K + I+CG+ S A
Sbjct: 25 DGKHFLALTREGEVYSWGSGDGGKLGHGDTS-PREEPTLVTGLAGKQVIRISCGSTHSAA 83
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ SEG LY WG GN +LG+G +D L P+ + G L + ++ VA G + LA
Sbjct: 84 VTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSG--LRGHHIIDVACGSGDAHTLA 137
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G+V T G+GD +LG G D RK +V+ L +V+V VG +H + +T+ G+V+ WG
Sbjct: 2686 GLVWTWGKGDYYRLGHGNDTHVRKP-QIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWG 2744
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDG-------TVYAWG 145
ND G G + PQ VN +K +++ G SHS+A E +
Sbjct: 2745 DNDHGQQGNNTTTVNRR-PQLVNGLEGQKITRVACGSSHSIAWAESDLPTPATHEPVMFP 2803
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
RD G+ L E Q + + SG H L L C Q LG
Sbjct: 2804 VSRDPLGASCLAPEPTQSPSATILDTISNNDLISGKRHRPSLAKIVLSLNTNCERQQALG 2863
Query: 206 RI 207
I
Sbjct: 2864 HI 2865
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPD--VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D V K A ++ V+ + G +H V T+ G+VY
Sbjct: 3615 TRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQG-KKVITIATGSLHCVASTDTGEVY 3673
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 3674 TWGDNDEGQLG---DGTTNAIARPRLVTALQGKKISRVACGSAHTIA 3717
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 162/358 (45%), Gaps = 33/358 (9%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGP-DVMERKTF 62
K AEN K ++ ++ + C TG G + G + GQLGL + + T
Sbjct: 23 KFAENIPSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTC 82
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTV-NLPK 120
+ VV G HT+ TE GK+Y+ G N EG LG + G + F + N
Sbjct: 83 VKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQY 142
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
K Q+SAG + S AL DG ++ WG +S G +GL+ E I TP K++ I I+ G
Sbjct: 143 KIKQLSAGSNTSAALTVDGKLFMWGD--NSEGQLGLEKEAIYSTPQKIDIGKPISWISCG 200
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H +T G L T G PE G+LG + + + +S L G+V + V
Sbjct: 201 YYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLS-GKVKI-------VSC 252
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLAS 298
G +T ++ + FGL + QLG G F T P + L+ K +
Sbjct: 253 GGEHTIAVTEKEVYTFGLGQFGQLGH--------GTFIFETQLPKAVDVLTKKTILYVTC 304
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNC 354
G++H+ + +G +Y FG +G+LGL +N + P + T+ S+ACG C
Sbjct: 305 GENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFV-PILCSNFLKFTVQSVACGGC 361
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 29/321 (9%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS 126
D + G HTV +T +GK+Y +G N+ G LG EA G + P V K K V S
Sbjct: 37 DKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEA-GSAISKPTCVKALKSEKVVFAS 95
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK----LESVSGIVKIASGAD 182
G +H++ E G +Y+ G +S G +GL G+ +T + + I ++++G++
Sbjct: 96 CGRNHTLLYTEQGKLYSSGG--NSEGQLGL-GDTSGRTSFQEISFFNTQYKIKQLSAGSN 152
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
LT G L G +GQLG + + P ++ + K I + G
Sbjct: 153 TSAALTVDGKLFMWGDNSEGQLG----------LEKEAIYSTPQKIDIG-KPISWISCGY 201
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
Y++ F++ G + FG +LG +++K P + LS K +++ G
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKK-----PQRVSGLSGK-VKIVSCGGE 255
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H++A+ +E ++Y FG +G+LG P + L KTI + CG + I
Sbjct: 256 HTIAV-TEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD 314
Query: 362 EGVLYGWGMGNGYQLGNGKED 382
+G+LY +G G +LG G+E+
Sbjct: 315 KGLLYTFGDGRHGKLGLGEEN 335
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 87/333 (26%)
Query: 243 YNTFISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ ++ G + FG NN+ QLG EA S + K P +K+L +K + G++
Sbjct: 48 HTVLVTGNGKLYVFGSNNWGQLGLEAGSAISK--------PTCVKALKSEKVVFASCGRN 99
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAID 360
H+L +GK+Y+ G + G+LGL + S + + + Q K I ++ G+ S A+
Sbjct: 100 HTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYK-IKQLSAGSNTSAALT 158
Query: 361 SEGVLYGWGMGNGYQLGNGKED--------DI----------------LNSEGKIYAFGR 396
+G L+ WG + QLG KE DI + +G++Y FG
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGE 218
Query: 397 HDYGRLG-----LKNVSEP----------------------VTE---------------- 413
+ G+LG LK +P VTE
Sbjct: 219 PENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEKEVYTFGLGQFGQLGH 278
Query: 414 ---------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
P + L KTI + CG + I +G+LY +G G +LG G+E+
Sbjct: 279 GTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTN 338
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
+ + I +TV VA GG H ++ A P+P
Sbjct: 339 QFVPILCSNFLKFTVQSVACGGCHMLVFATPRP 371
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
L + K ++ G H++ + GK+Y FG +++G+LGL+ +++PT + +L+ + +
Sbjct: 34 LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLE-AGSAISKPTCVKALKSEKVV 92
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+CG + +G LY G + QLG G GR + + N
Sbjct: 93 FASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTS------------GRTSFQEISFFNT 140
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
I ++ G+ S A+ +G L+ WG + QLG KE P
Sbjct: 141 Q--------------YKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQ 186
Query: 468 KIE 470
KI+
Sbjct: 187 KID 189
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 25/315 (7%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGD 129
V EV G HT+ L +G VY+ G ND G LG++ + Q L ++ ++ G+
Sbjct: 87 VREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK--LEQVAALSAHEIRAVACGE 144
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLT 188
+HS+AL + G V++WG R+ G + E ++ +K + IV+IA GA H + L
Sbjct: 145 AHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA 204
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-I 247
+ G L + G GQLG + + R +S L VPL V G ++ +
Sbjct: 205 NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLV--GVPLAL-----VACGAMHSVGL 257
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G++ +G N+ QLG +D + P ++K L ++ + G++H+ AL
Sbjct: 258 TPSGTVFVWGRNSCGQLGLSDQRDR-------LHPTVLKPLRSQRIKHVCCGENHTAALT 310
Query: 308 SEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSEGV 364
++G ++ FG YG+LG V+E V P + L I+ ++CG C V++A S G
Sbjct: 311 ADGGVFTFGAGTYGQLGHGVKVNEAV--PRRVVELMGTAISQLSCGRCHTVAYAPQS-GR 367
Query: 365 LYGWGMGNGYQLGNG 379
LY +G+G QLGNG
Sbjct: 368 LYIFGLGMSGQLGNG 382
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 28/311 (9%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V +CG D GQLG + + + A + + V G H++ L++ G+V++WG
Sbjct: 102 ANGSVYSCGANDFGQLGQDRSMRKLEQVAALSA-HEIRAVACGEAHSLALSDAGQVFSWG 160
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CN G LG E +S P+ + VQI+ G H +AL +G +++WG
Sbjct: 161 CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQL 220
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G G ++ P ++ + G+ +A GA H V LT G + G GQLG QR
Sbjct: 221 GLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQR 280
Query: 211 SASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
L P + PL+ + I V G +T +++ G + FG Y QLG
Sbjct: 281 DR----------LHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG- 329
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE-GKIYAFGRHDYGRLG--- 324
+V ++ P + L + L+ G+ H++A + G++Y FG G+LG
Sbjct: 330 VKVNEA------VPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGT 383
Query: 325 LKNVSEPVTEP 335
L++ + PVT P
Sbjct: 384 LESSALPVTVP 394
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 177/399 (44%), Gaps = 67/399 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--------QISAGDSHSVALLEDGTV 141
+Y+WG G LG D V+ P++ +++ G H++ LL +G+V
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTA 196
Y+ G+ + G +G ++ KLE V+ I +A G H + L+ G + +
Sbjct: 107 YSCGA--NDFGQLGQ-----DRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 159
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSIL 254
GC GQLG T+ S L P + L HI + G V+ +++ G +
Sbjct: 160 GCNRNGQLGCGTEEE---------SRLRPKVIKKLATLHIVQIACGAVHCLALANNGELF 210
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
++G N QLG +GN P + L ++A G HS+ L G ++
Sbjct: 211 SWGGNASGQLGLGRD---STGNERL--PRRVSHLVGVPLALVACGAMHSVGLTPSGTVFV 265
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+GR+ G+LGL + + + PT + L+ + I + CG + A+ ++G ++ +G G
Sbjct: 266 WGRNSCGQLGLSDQRDRL-HPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC- 433
QLG+ G+K V+E V P + L I+ ++CG C
Sbjct: 325 QLGH------------------------GVK-VNEAV--PRRVVELMGTAISQLSCGRCH 357
Query: 434 -VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
V++A S G LY +G+G QLGNG + P+ + G
Sbjct: 358 TVAYAPQS-GRLYIFGLGMSGQLGNGTLESSALPVTVPG 395
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 41/290 (14%)
Query: 233 KHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ + +V G +T + + GS+ + G N++ QLG+ D ++K + H I+++
Sbjct: 85 RAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQ-DRSMRKLEQVAALSAHEIRAV--- 140
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
A G+ HSLAL+ G+++++G + G+LG E P I L I IAC
Sbjct: 141 -----ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIAC 195
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------- 383
G A+ + G L+ WG QLG G++
Sbjct: 196 GAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV 255
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L G ++ +GR+ G+LGL + + + PT + L+ + I + CG + A+ ++G
Sbjct: 256 GLTPSGTVFVWGRNSCGQLGLSDQRDRL-HPTVLKPLRSQRIKHVCCGENHTAALTADGG 314
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
++ +G G QLG+G + + P ++ +L + Q++ G H+V A
Sbjct: 315 VFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYA 362
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 364 VLYGWGMGNGYQLGNGKEDD---------------------------------ILNSEGK 390
+LY WG+G +LG + D +L + G
Sbjct: 46 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 105
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+Y+ G +D+G+LG + + + +L I ++ACG S A+ G ++ WG
Sbjct: 106 VYSCGANDFGQLGQDRSMRKLEQ---VAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 162
Query: 451 NGYQLGNGKEDDI-LEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
QLG G E++ L P I K+L ++Q+A G H + LA
Sbjct: 163 RNGQLGCGTEEESRLRPKVI--KKLATLHIVQIACGAVHCLALA 204
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 45/355 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G VL+CG D QLG + + ++ L +V+V G H++ LTE G+VY W
Sbjct: 67 TSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQCL-RIVQVCCGQQHSMALTEAGQVYMW 125
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G N +G LG +S P+ V P VQI+ G +H +ALL +G +YAWG +
Sbjct: 126 GSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQ 185
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G GE Q+ P+++ ++ G + +IA GA+H ++L+ G + G GQLG
Sbjct: 186 LGIGTVGEP-QRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLG---- 240
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGSILAFGLNNYSQLGEAD 268
S N R L L+++H+ + G ++ +++ G + FG + Y
Sbjct: 241 --LSDNKDRAFPTLLKT---LRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYE-----S 290
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH---DYGRLGL 325
EV+ S P +L+ K F+++ F RH YG+LG
Sbjct: 291 HEVRISLRGTESNPQ--SALARKLFSLIER---------------EFCRHSYGSYGQLGH 333
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSEGVLYGWGMGNGYQLGN 378
+ ++ +T P I L TIT IA G C V +A + G ++ +G+G QLG+
Sbjct: 334 GSKNDQLT-PMKIQELMGTTITQIALGRCHTVCYA-PTVGKVFTFGLGGNGQLGS 386
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 195/431 (45%), Gaps = 82/431 (19%)
Query: 43 GQGDTGQLGLG--PDVMER--KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
G ++G+LGLG D + R ++ +E + V ++ G HT+ LT G+V + G ND
Sbjct: 22 GNTNSGELGLGGIEDHIVRVPRSIPQLEGI-RVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
LG+E ++ P T + VQ+ G HS+AL E G VY WGS +S G +G G
Sbjct: 81 DQLGQEV-STTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGS--NSKGQLG-NG 136
Query: 159 EGIQK--TPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
EG + +P +++++ +V+IA G++H + L + G L G GQLG T
Sbjct: 137 EGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVG---- 192
Query: 215 NARRGMSFLEPGEVPLKRKH-----IDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEAD 268
EP VP++ + + + G ++ + SK G I +G N + QLG +D
Sbjct: 193 ---------EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSD 243
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
++ + F P L+K+L + +A+G HS AL + G ++ FG Y ++ +
Sbjct: 244 NK-----DRAF--PTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVR-I 295
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
S TE P +L K + I C G+ QLG+G ++D L
Sbjct: 296 SLRGTESNPQSALARKLFSLIEREFCRH------------SYGSYGQLGHGSKNDQLT-- 341
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSEGVLYG 446
P I L TIT IA G C V +A + G ++
Sbjct: 342 -------------------------PMKIQELMGTTITQIALGRCHTVCYA-PTVGKVFT 375
Query: 447 WGMGNGYQLGN 457
+G+G QLG+
Sbjct: 376 FGLGGNGQLGS 386
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 162/374 (43%), Gaps = 65/374 (17%)
Query: 152 GSMGLKG--EGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +GL G + I + P + + GI +IA+GA H ++LTS G +L+ G + QLG+
Sbjct: 27 GELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQ- 85
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
+S +P V L+ I V G ++ ++ G + +G N+ QLG
Sbjct: 86 -----------EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLG 134
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G +P +K+L+ +A G +H LAL + G +YA+G + G+LG+
Sbjct: 135 NGE------GQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGI 188
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-- 383
V EP P + +L ++ IACG S + GV++ WG QLG D
Sbjct: 189 GTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRA 248
Query: 384 ------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
L + G ++ FG Y ++ +S TE P +
Sbjct: 249 FPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVR-ISLRGTESNPQSA 307
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
L K + I C G+ QLG+G ++D L PMKI+ +L T+
Sbjct: 308 LARKLFSLIEREFCRH------------SYGSYGQLGHGSKNDQLTPMKIQ--ELMGTTI 353
Query: 480 LQVASGGQHSVILA 493
Q+A G H+V A
Sbjct: 354 TQIALGRCHTVCYA 367
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 39/268 (14%)
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
L FG N +LG E + P I L + +A+G HH+L L S G++
Sbjct: 19 LGFGNTNSGELGLGGIE-----DHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVL 73
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+ G +D+ +LG + VS T+P P+ +LQ I + CG S A+ G +Y WG +
Sbjct: 74 SCGSNDHDQLG-QEVS--TTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSK 130
Query: 374 YQLGNGKEDD----------------------------ILNSEGKIYAFGRHDYGRLGLK 405
QLGNG+ + +LN+ G +YA+G + G+LG+
Sbjct: 131 GQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNN-GALYAWGDNGNGQLGIG 189
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
V EP P + +L ++ IACG S + GV++ WG QLG D
Sbjct: 190 TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAF 249
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P + K L V +A+GG HS L
Sbjct: 250 PTLL--KTLRQQHVKFIAAGGAHSAALT 275
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2185 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 2242
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 2243 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 2302 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2352
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 2353 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2405
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 2406 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 2457
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 2458 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2497
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 2498 TDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 2547
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 179/423 (42%), Gaps = 67/423 (15%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3179 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3237
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 3238 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3295
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 3296 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 3347
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+ +L + +A SG +L L + ++++G D
Sbjct: 3348 GRLGHSDSEDQ-------LKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3400
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 3401 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 3451
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 437
DY RLG + V P + LQ K + +IA G +CV
Sbjct: 3452 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 3492
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAK 494
D Y WG + QLG+G + I P ++GK++N +VA G H++ +
Sbjct: 3493 EDGS---YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWST 3544
Query: 495 PKP 497
KP
Sbjct: 3545 SKP 3547
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2295
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 2296 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 2350
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2351 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2410
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 2411 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2455
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2456 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 2507
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2508 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 177/434 (40%), Gaps = 69/434 (15%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVV 76
+K + E+ T++ K V G D QLG L ++ +F+ NVV+V
Sbjct: 2170 RKKATSLESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 2224
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHS 132
G +T +GKVY G G LG + IP+ + K V + +G H+
Sbjct: 2225 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2284
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSR 190
AL DG V++WG D G +G P +E++ I IA G+ H LTS
Sbjct: 2285 TALTVDGKVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2342
Query: 191 GNLLTAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT- 245
G L T G E G+LG TQ L+P V + H + V G +
Sbjct: 2343 GELYTWGLGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQ 2389
Query: 246 --FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
++ +G + ++G ++ +LG SE C P I+ L+ + + G S
Sbjct: 2390 TLALTDEGLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFS 2442
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LAL G ++ +G+ DY RLG V +P + L+ K I +A G A+ G
Sbjct: 2443 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG 2501
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
+Y WG + Q GNG + +PT + L+ +
Sbjct: 2502 QVYAWGDNDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQ 2534
Query: 424 TITSIACGNCVSFA 437
IT +ACG+ S A
Sbjct: 2535 KITRVACGSSHSVA 2548
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 174/416 (41%), Gaps = 64/416 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3177 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 3235
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 3236 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3295
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 3296 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 3350
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + DV G ++ ++ ++G +Y +
Sbjct: 3351 GHSDSEDQ-------LKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 3403
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 3404 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 3456
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
G + V P + LQ K + +IA G +CV D Y WG + QLG+G
Sbjct: 3457 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS---YTWGDNDEGQLGDG-- 3510
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 3511 -------------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3541
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 158/332 (47%), Gaps = 55/332 (16%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVE 66
Q VF+ AV + + G V + G+ + G+LG G P V+E + +E
Sbjct: 3262 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE 3319
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KA 122
VV+V GG H+ C+T G +YTWG +G GR DSE P+ V+ + +
Sbjct: 3320 ----VVDVAAGGAHSACVTAAGDLYTWG---KGRYGRLGHSDSEDQLKPKLVDALQGHRV 3372
Query: 123 VQIS--AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
V ++ +GD+ ++ L +D TV++WG +G +G G K P+K++S++ G+VK+
Sbjct: 3373 VDVACGSGDAQTLCLTDDDTVWSWGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 3430
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
G+ V LT G + T G + +LG + + RR P +V L+ K +
Sbjct: 3431 CGSQFSVALTKSGAVYTWGKGDYHRLG----HGSDDHVRR------PRQVQGLQGKKVIA 3480
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTML 296
+ TG + ++ +G N+ QLG+ + +Q+ P L+ +L KK +
Sbjct: 3481 IATGSLHCVCCTEDGSYTWGDNDEGQLGDGTTNAIQR--------PRLVAALQGKKVNRV 3532
Query: 297 ASGQHHSLALN-----SEGKIYAFGRHDYGRL 323
A G H+LA + S GK+ A +Y L
Sbjct: 3533 ACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 3564
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2183 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2235
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 2280
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 2281 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 2330
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 2331 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 2388
Query: 490 VILA 493
LA
Sbjct: 2389 QTLA 2392
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 25/315 (7%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGD 129
V EV G HT+ L +G VY+ G ND G LG++ + Q L ++ ++ G+
Sbjct: 93 VREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK--LEQVAALSAHEIRAVACGE 150
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESVSGIVKIASGADHFVMLT 188
+HS+AL + G V++WG R+ G + E ++ +K + IV+IA GA H + L
Sbjct: 151 AHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA 210
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-I 247
+ G L + G GQLG + + R +S L VPL V G ++ +
Sbjct: 211 NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLV--GVPLAL-----VACGAMHSVGL 263
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ G++ +G N+ QLG +D + P ++K L ++ + G++H+ AL
Sbjct: 264 TPSGTVFVWGRNSCGQLGLSDQRDR-------LHPTVLKPLRSQRIKHVCCGENHTAALT 316
Query: 308 SEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNC--VSFAIDSEGV 364
++G ++ FG YG+LG V+E V P + L I+ ++CG C V++A S G
Sbjct: 317 ADGGVFTFGAGTYGQLGHGVKVNEAV--PRRVVELMGTAISQLSCGRCHTVAYAPQS-GR 373
Query: 365 LYGWGMGNGYQLGNG 379
LY +G+G QLGNG
Sbjct: 374 LYIFGLGMSGQLGNG 388
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 28/311 (9%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V +CG D GQLG + + + A + + V G H++ L++ G+V++WG
Sbjct: 108 ANGSVYSCGANDFGQLGQDRSMRKLEQVAALS-AHEIRAVACGEAHSLALSDAGQVFSWG 166
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
CN G LG E +S P+ + VQI+ G H +AL +G +++WG
Sbjct: 167 CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQL 226
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G G ++ P ++ + G+ +A GA H V LT G + G GQLG QR
Sbjct: 227 GLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQR 286
Query: 211 SASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
L P + PL+ + I V G +T +++ G + FG Y QLG
Sbjct: 287 DR----------LHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG- 335
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE-GKIYAFGRHDYGRLG--- 324
+V ++ P + L + L+ G+ H++A + G++Y FG G+LG
Sbjct: 336 VKVNEA------VPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGT 389
Query: 325 LKNVSEPVTEP 335
L++ + PVT P
Sbjct: 390 LESSALPVTVP 400
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 177/399 (44%), Gaps = 67/399 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--------QISAGDSHSVALLEDGTV 141
+Y+WG G LG D V+ P++ +++ G H++ LL +G+V
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTA 196
Y+ G+ + G +G ++ KLE V+ I +A G H + L+ G + +
Sbjct: 113 YSCGA--NDFGQLGQ-----DRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 165
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSIL 254
GC GQLG T+ S L P + L HI + G V+ +++ G +
Sbjct: 166 GCNRNGQLGCGTEEE---------SRLRPKVIKKLATLHIVQIACGAVHCLALANNGELF 216
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
++G N QLG +GN P + L ++A G HS+ L G ++
Sbjct: 217 SWGGNASGQLGLGRD---STGNERL--PRRVSHLVGVPLALVACGAMHSVGLTPSGTVFV 271
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+GR+ G+LGL + + + PT + L+ + I + CG + A+ ++G ++ +G G
Sbjct: 272 WGRNSCGQLGLSDQRDRL-HPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC- 433
QLG+ G+K V+E V P + L I+ ++CG C
Sbjct: 331 QLGH------------------------GVK-VNEAV--PRRVVELMGTAISQLSCGRCH 363
Query: 434 -VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
V++A S G LY +G+G QLGNG + P+ + G
Sbjct: 364 TVAYAPQS-GRLYIFGLGMSGQLGNGTLESSALPVTVPG 401
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 41/290 (14%)
Query: 233 KHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ + +V G +T + + GS+ + G N++ QLG+ D ++K + H I+++
Sbjct: 91 RAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQ-DRSMRKLEQVAALSAHEIRAV--- 146
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
A G+ HSLAL+ G+++++G + G+LG E P I L I IAC
Sbjct: 147 -----ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIAC 201
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------- 383
G A+ + G L+ WG QLG G++
Sbjct: 202 GAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV 261
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
L G ++ +GR+ G+LGL + + + PT + L+ + I + CG + A+ ++G
Sbjct: 262 GLTPSGTVFVWGRNSCGQLGLSDQRDRL-HPTVLKPLRSQRIKHVCCGENHTAALTADGG 320
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
++ +G G QLG+G + + P ++ +L + Q++ G H+V A
Sbjct: 321 VFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYA 368
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 364 VLYGWGMGNGYQLGNGKEDD---------------------------------ILNSEGK 390
+LY WG+G +LG + D +L + G
Sbjct: 52 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 111
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+Y+ G +D+G+LG + + + +L I ++ACG S A+ G ++ WG
Sbjct: 112 VYSCGANDFGQLGQDRSMRKLEQ---VAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 168
Query: 451 NGYQLGNGKEDDI-LEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
QLG G E++ L P I K+L ++Q+A G H + LA
Sbjct: 169 RNGQLGCGTEEESRLRPKVI--KKLATLHIVQIACGAVHCLALA 210
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +E L V+
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEA--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 163/376 (43%), Gaps = 56/376 (14%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA- 178
VQ++ G A+ +G VYA G ++G +GL G P ++ ++S V K+A
Sbjct: 2699 VQVAGGSKSLFAVTVEGKVYACGEA--TNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAV 2756
Query: 179 -SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
SG H LT G + + G + G+LG ++ + + +E LK K I D
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEA----LKTKRIRD 2807
Query: 238 VFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G ++ ++S G + +GL Y +LG D NT P ++K L + +
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQV 2860
Query: 297 ASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
A G +LAL EG ++++G D+G+LG + SE P I L + + I CG
Sbjct: 2861 ACGSRDAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQ 2919
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
S A+ GV++ WG G DY RLG V +P
Sbjct: 2920 FSLALTKSGVVWTWGKG--------------------------DYFRLG-HGSDVHVRKP 2952
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
+ L+ K I +A G A+ G +Y WG + Q GNG +P ++G L
Sbjct: 2953 QVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--L 3010
Query: 475 NNYTVLQVASGGQHSV 490
+ +VA G HSV
Sbjct: 3011 EGQKITRVACGSSHSV 3026
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 2715 GKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 2774
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 2775 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG-----L 2829
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 2830 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2889
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR + Q N +G+ +E G ++ ++ G + +G
Sbjct: 2890 GRGGSEGCNVPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 2934
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 2935 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 2986
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 2987 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 177/423 (41%), Gaps = 68/423 (16%)
Query: 106 EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG-LKGEGIQKT 164
E D + + Q +N +SAG S GT+Y WG + G +G ++G + K
Sbjct: 3607 EHDEQLV-QWMNRRPDDWTLSAGGS--------GTIYGWG--HNHRGQLGGIEGAKV-KV 3654
Query: 165 PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF 222
P E+++ + V++ G +T+ G L G G+LG S S
Sbjct: 3655 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVS--------- 3705
Query: 223 LEPGEVPLKRKHIDDVFT--------GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
P + I VF G + +SS+G + ++G +LG +
Sbjct: 3706 -----APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR----- 3755
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
+ C P +++SL + +A+G HS + S G +Y +G+ YGRLG + SE +
Sbjct: 3756 -SPCD-RPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD-SEDQLK 3812
Query: 335 PTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------- 385
P + +LQ + +ACG + + + + ++ WG G+ +LG G D
Sbjct: 3813 PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPL 3872
Query: 386 -----------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
S ++ G+ DY RLG + V P + LQ K + +IA G+
Sbjct: 3873 SLRVGRPSTPPPSWPRLDVGGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3931
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
EG +Y WG + QLG+G + I P + L V +VA G H++ +
Sbjct: 3932 CVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQGRKVNRVACGSAHTLAWST 3989
Query: 495 PKP 497
KP
Sbjct: 3990 SKP 3992
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQPLAVTDNGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L+++L KK
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEALQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G H LAL + +++++G +D + + + EP+ +P L K I IACG
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGNNDQCQ-HFDTLHQTKPEPSLLPGLDTKHIVGIACG 770
Query: 353 NCVSFAIDS 361
SFA S
Sbjct: 771 PAQSFAWSS 779
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 39/306 (12%)
Query: 64 LVEDLDNV----VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP 119
L+E + +V V V GG H + L+ +G+VY+WG ++G LG + P+ V
Sbjct: 3709 LLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVVESL 3767
Query: 120 K--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IV 175
+ + V I+AG +HS + G +Y WG R +G +G Q P +E++ G +V
Sbjct: 3768 RGTEVVDIAAGGAHSACVTSAGDLYTWGKGR--YGRLGHSDSEDQLKPKLVEALQGHRVV 3825
Query: 176 KIA--SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+A SG + LT + + G + G+LG R G P +VPL +
Sbjct: 3826 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--------RGGSDGCKV--PMKVPLSLR 3875
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKK 292
G +T S + G +Y +LG +D V++ P ++ L KK
Sbjct: 3876 ------VGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRR--------PRQVQGLQGKK 3921
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G H + EG++Y +G +D G+LG + + P + +LQ + + +ACG
Sbjct: 3922 VIAIATGSLHCVCCTEEGEVYTWGDNDEGQLG-DGTTNAIQRPRLVAALQGRKVNRVACG 3980
Query: 353 NCVSFA 358
+ + A
Sbjct: 3981 SAHTLA 3986
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
P Q ++S V + +GG G V + G+GD G+LG M L+E
Sbjct: 2740 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIE 2798
Query: 67 DL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKA 122
L + ++ G H+ LT G++YTWG + G LG + ++ P+ V L +
Sbjct: 2799 ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRV 2857
Query: 123 VQISAG--DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIA 178
+Q++ G D+ ++AL ++G V++WG G +G G P +E ++ G+ +I
Sbjct: 2858 IQVACGSRDAQTLALTDEGLVFSWGD--GDFGKLGRGGSEGCNVPQNIERLNGQGVCQIE 2915
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDD 237
GA + LT G + T G + +LG + + +P V L+ K I
Sbjct: 2916 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSD----------VHVRKPQVVEGLRGKKIVH 2965
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G + ++ G + A+G N++ Q G + V + P L++ L +K T +
Sbjct: 2966 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK-------PTLVQGLEGQKITRV 3018
Query: 297 ASGQHHSLALNS 308
A G HS+A +
Sbjct: 3019 ACGSSHSVAWTT 3030
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P ++LS +A G A+ EGK+YA G GRLGL S V PIP
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV----PIP- 2740
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
+ +T+++ S+ + V G G+ L +GK++++G D G
Sbjct: 2741 ---RQVTALS-----SYVVKKVAVHSG-----------GRHATALTVDGKVFSWGEGDDG 2781
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
+LG + +P I +L+ K I IACG+ S A+ S G LY WG+G +LG+G
Sbjct: 2782 KLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2840
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
L+P + K L + V+QVA G + + LA
Sbjct: 2841 TTQLKPKMV--KVLLGHRVIQVACGSRDAQTLA 2871
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 147/348 (42%), Gaps = 46/348 (13%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ +A+ ++G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ V LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG T+ R LE L+ K + DV G + ++ + ++G N+
Sbjct: 690 LGHGTEEHV-----RYPKLLE----ALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQC 740
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIYAF-- 315
Q + + + P L+ L K +A G S A + S G F
Sbjct: 741 QHFDTLHQTKPE-------PSLLPGLDTKHIVGIACGPAQSFAWSSCSEWSVGLRVPFVV 793
Query: 316 ----GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
G + L L+ VSE + P Q+K ++A N + +
Sbjct: 794 DVCSGTFEQLDLLLRQVSEGMDGTADWPPPQEKECVAVATLNLLRLQL 841
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 52/306 (16%)
Query: 37 GVVLTCGQGDTGQLGLG---PDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
G V + G+ + G+LG G P R +VE L VV++ GG H+ C+T G +Y
Sbjct: 3737 GEVYSWGEAEDGKLGHGNRSPCDRPR----VVESLRGTEVVDIAAGGAHSACVTSAGDLY 3792
Query: 92 TWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWG 145
TWG +G GR DSE P+ V + + V ++ +GD+ ++ L +D TV++WG
Sbjct: 3793 TWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWG 3849
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G K P+K+ + + ++ + L G +G
Sbjct: 3850 D--GDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGG---------KGDYH 3898
Query: 206 RITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQ 263
R+ S + RR P +V L+ K + + TG ++ + +G + +G N+ Q
Sbjct: 3899 RLGHGS-DDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQ 3951
Query: 264 LGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIYAFGR 317
LG+ + +Q+ P L+ +L +K +A G H+LA + S GK+ A
Sbjct: 3952 LGDGTTNAIQR--------PRLVAALQGRKVNRVACGSAHTLAWSTSKPASAGKLPAQVP 4003
Query: 318 HDYGRL 323
+Y L
Sbjct: 4004 MEYNHL 4009
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G +V LT+
Sbjct: 622 TDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSVALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
+
Sbjct: 736 N 736
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G + +T++G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQPLAVTDNGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G SVAL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSVALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ + +G E + P LE++ G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQH 742
Query: 205 GRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
++ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLHQTKP----------EPSLLPGLDTKHIVGIACGPAQSFAWSSCSEWSVGLR 788
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 162/358 (45%), Gaps = 33/358 (9%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGP-DVMERKTF 62
K AEN K ++ ++ + C TG G + G + GQLGL + + T
Sbjct: 23 KFAENIPSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTC 82
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTV-NLPK 120
+ VV G HT+ TE GK+Y+ G N EG LG + G + F + N
Sbjct: 83 VKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQY 142
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
K Q+SAG + S AL DG ++ WG +S G +GL+ E I TP K++ I I+ G
Sbjct: 143 KIKQLSAGSNTSAALTVDGKLFMWGD--NSEGQLGLEKEAIYSTPQKIDIGKPISWISCG 200
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H +T G L T G PE G+LG + + + +S L G+V + V
Sbjct: 201 YYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLS-GKVKI-------VSC 252
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLAS 298
G +T ++ + FGL + QLG G F T P + L+ K +
Sbjct: 253 GGEHTIAVTEKEVYTFGLGQFGQLGH--------GTFIFETQLPKAVDVLTKKTILYVTC 304
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNC 354
G++H+ + +G +Y FG +G+LGL +N + P + T+ S+ACG C
Sbjct: 305 GENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFV-PILCSNFLKFTVQSVACGGC 361
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 29/321 (9%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQIS 126
D + G HTV +T +GK+Y +G N+ G LG EA G + P V K K V S
Sbjct: 37 DRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEA-GSAISKPTCVKALKSEKVVFAS 95
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK----LESVSGIVKIASGAD 182
G +H++ E G +Y+ G +S G +GL G+ +T + + I ++++G++
Sbjct: 96 CGRNHTLLYTEQGKLYSSGG--NSEGQLGL-GDTSGRTSFQEISFFNTQYKIKQLSAGSN 152
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
LT G L G +GQLG + + P ++ + K I + G
Sbjct: 153 TSAALTVDGKLFMWGDNSEGQLG----------LEKEAIYSTPQKIDIG-KPISWISCGY 201
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
Y++ F++ G + FG +LG +++K P + LS K +++ G
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKK-----PQRVSGLSGK-VKIVSCGGE 255
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H++A+ +E ++Y FG +G+LG P + L KTI + CG + I
Sbjct: 256 HTIAV-TEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD 314
Query: 362 EGVLYGWGMGNGYQLGNGKED 382
+G+LY +G G +LG G+E+
Sbjct: 315 KGLLYTFGDGRHGKLGLGEEN 335
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 87/333 (26%)
Query: 243 YNTFISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ ++ G + FG NN+ QLG EA S + K P +K+L +K + G++
Sbjct: 48 HTVLVTGNGKLYVFGSNNWGQLGLEAGSAISK--------PTCVKALKSEKVVFASCGRN 99
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAID 360
H+L +GK+Y+ G + G+LGL + S + + + Q K I ++ G+ S A+
Sbjct: 100 HTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYK-IKQLSAGSNTSAALT 158
Query: 361 SEGVLYGWGMGNGYQLGNGKED--------DI----------------LNSEGKIYAFGR 396
+G L+ WG + QLG KE DI + +G++Y FG
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGE 218
Query: 397 HDYGRLG-----LKNVSEP----------------------VTE---------------- 413
+ G+LG LK +P VTE
Sbjct: 219 PENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEKEVYTFGLGQFGQLGH 278
Query: 414 ---------PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
P + L KTI + CG + I +G+LY +G G +LG G+E+
Sbjct: 279 GTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTN 338
Query: 465 EPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
+ + I +TV VA GG H ++ A P+P
Sbjct: 339 QFVPILCSNFLKFTVQSVACGGCHMLVFATPRP 371
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
L + + ++ G H++ + GK+Y FG +++G+LGL+ +++PT + +L+ + +
Sbjct: 34 LKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLE-AGSAISKPTCVKALKSEKVV 92
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+CG + +G LY G + QLG G GR + + N
Sbjct: 93 FASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTS------------GRTSFQEISFFNT 140
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
I ++ G+ S A+ +G L+ WG + QLG KE P
Sbjct: 141 Q--------------YKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQ 186
Query: 468 KIE 470
KI+
Sbjct: 187 KID 189
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 163/364 (44%), Gaps = 34/364 (9%)
Query: 13 AENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKTFAL 64
A+N + F+ + V ++ C G + G D GQLGLG + + + +
Sbjct: 13 ADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVK 72
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVN----L 118
V + V V G HT+ T K++ G + EG LGR A GDS IP V
Sbjct: 73 VLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYDSGPT 132
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSGIVKI 177
K VQI AG HS+AL DG V+AWGS + G +GL G+ P K+ + +I
Sbjct: 133 GSKIVQIVAGSHHSLALTSDGNVFAWGS--NLEGQLGLPDISGLVNKPTKVHIPEPVKQI 190
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+G H + LT G + G E G+LG S + P ++ L I
Sbjct: 191 NTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQ---------IVPKQMQLPSPVIHV 241
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK--SLSDKKFTM 295
G + ++ K ++ G N+ QLG + T P L+ +L ++K +
Sbjct: 242 ACGGHHTVILTEKDNLYCTGSNSSGQLGLG------TNVTELHIPKLLPRGALKNEKISH 295
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++ G+ H+ L GK+Y G +G+LGL+ V E T + ++ I++I+CG C
Sbjct: 296 ISCGESHTAILTESGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKELFISNISCGGCH 355
Query: 356 SFAI 359
+ I
Sbjct: 356 TILI 359
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 54/357 (15%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
++ I+ G +H ++ G L G + GQLG + S+ P V LK
Sbjct: 27 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISK----------PSCVKVLKP 76
Query: 233 KHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--S 289
+ + V G +T I + I A G + QLG S + S + P L+ +
Sbjct: 77 EKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASI----PVLVYDSGPT 132
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTIT 347
K + +G HHSLAL S+G ++A+G + G+LGL ++S V +PT IP + +
Sbjct: 133 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIP----EPVK 188
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLG-------------------------NGKED 382
I G S + G++Y G +LG G
Sbjct: 189 QINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPVIHVACGGHHT 248
Query: 383 DILNSEGKIYAFGRHDYGRLGL-KNVSE-PVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
IL + +Y G + G+LGL NV+E + + P +L+++ I+ I+CG + +
Sbjct: 249 VILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCGESHTAILTE 308
Query: 441 EGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
G LY G G +LG E+++ E ++ + + ++ GG H++++ + +
Sbjct: 309 SGKLYTCGDGRHGKLGLEENENNVHELTFVQ--RYKELFISNISCGGCHTILIGQKR 363
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 54/376 (14%)
Query: 40 LTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG 99
LT + D Q+ L P ++ V +L ++++ G HTV LT DG+VY+ GCN+
Sbjct: 20 LTLDKNDAYQI-LIPKALD------VRNLPTLIQITCGYTHTVFLTIDGEVYSCGCNEFQ 72
Query: 100 ALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
LG G + + V L + + ++ G H+ A+ +G ++ WG +S+G +G +G
Sbjct: 73 QLGHGQSGGQ--LAKVVALEHYRIISVACGAYHNAAITYNGLLFTWGC--NSNGQLGREG 128
Query: 159 EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
+ ++ S +V+++ G +H ++LT + G +GQLG S+ ++
Sbjct: 129 DDTGVKLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLG--LGYSSEQSVSI 186
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQL------------- 264
L +P++R + G +++F+ + GS+ A+G NNY QL
Sbjct: 187 PQQILCLSGLPVRR-----IVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQ 241
Query: 265 ----------GEADSEVQKSGNTCF----------FTPHLIKSLSDKKFTMLASGQHHSL 304
G + ++S N F P +K+L + LA G+ H++
Sbjct: 242 NELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTV 301
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEG 363
AL +G ++ FG YG+LG + ++ P I +T IACG + A + G
Sbjct: 302 ALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKTG 361
Query: 364 VLYGWGMGNGYQLGNG 379
L+ +G G QLG G
Sbjct: 362 RLFAFGQGTNAQLGMG 377
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 184/455 (40%), Gaps = 79/455 (17%)
Query: 89 KVYTWGCNDEGALGREAEGDSE-FIPQTV---NLPKKAVQISAGDSHSVALLEDGTVYAW 144
+++ WG +EG L + + IP+ + NLP +QI+ G +H+V L DG VY+
Sbjct: 8 ELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPT-LIQITCGYTHTVFLTIDGEVYSC 66
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G G G + K + LE I+ +A GA H +T G L T GC GQL
Sbjct: 67 GCNEFQQLGHGQSGGQLAKV-VALEHYR-IISVACGAYHNAAITYNGLLFTWGCNSNGQL 124
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQ 263
GR + + R L + V GV +T + + + AFG N Q
Sbjct: 125 GREGDDTGVKLVR-----------ALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQ 173
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S Q P I LS + +G HS L G +YA+G ++YG+L
Sbjct: 174 LGLGYSSEQSVS-----IPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQL 228
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE--------------------- 362
GL P+ +T + CG+ S ++D E
Sbjct: 229 GLSYFGSS-------PNDHQNELT-LKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPT 280
Query: 363 --GVLYGWGMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
L G + L G+ + L +G ++ FG YG+LG + ++ P I
Sbjct: 281 FVKTLRGCEV---VYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITE 337
Query: 420 LQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN-- 476
+T IACG + A + G L+ +G G QLG G + L P ++G +++
Sbjct: 338 FMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPVKGHWVSSHK 397
Query: 477 -----------------YTVLQVASGGQHSVILAK 494
Y + ++ SGG H+ +LA+
Sbjct: 398 SSSNESTVGTDSSSSKPYIIRRIFSGGDHTYLLAQ 432
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 164/376 (43%), Gaps = 45/376 (11%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
++AWGS + ++ K + Q L + ++ +++I G H V LT G + + G
Sbjct: 9 LFAWGSCEEGQLTLD-KNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCG 67
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY-NTFISSKGSILAF 256
C E QLG +S + A+ V L+ I V G Y N I+ G + +
Sbjct: 68 CNEFQQLGH--GQSGGQLAKV---------VALEHYRIISVACGAYHNAAITYNGLLFTW 116
Query: 257 GLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G N+ QLG E D K L+++LSD K ++ G H+L L +++AF
Sbjct: 117 GCNSNGQLGREGDDTGVK----------LVRALSDHKVVQVSLGVEHTLVLTDTARVFAF 166
Query: 316 GRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
G + G+LGL SE V+ P I L + I G SF + G LY WG N
Sbjct: 167 GSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYG 226
Query: 375 QLG--------NGKEDDILNSEGKIYAFGRHDYGRLG-----LKNVSEPVTEPTPIPSLQ 421
QLG N ++++ G + + D L V+ PT + +L+
Sbjct: 227 QLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLR 286
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMKIEGKQLNNYTVL 480
+ +ACG + A+ +G ++ +G G QLG+ + I P KI + V
Sbjct: 287 GCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKI--TEFMGNVVT 344
Query: 481 QVASGGQHSVILAKPK 496
Q+A G H++ L PK
Sbjct: 345 QIACGRFHTLALV-PK 359
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAG 128
VV + G HTV LT DG V+T+G G LG +P+ + + QI+ G
Sbjct: 290 VVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQIACG 349
Query: 129 DSHSVALL-EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
H++AL+ + G ++A+G ++ MG + P+K
Sbjct: 350 RFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPVK 389
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 61/399 (15%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTV 82
E+ TL+ G++ G G G+LG+ + K F + + N+ +V +G H+
Sbjct: 848 ESQITLQKPQYNGIIYIWGNGKDGRLGIEGE----KPFKFPQIIPNIQACQVSLGYHHSA 903
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGT 140
C++ G++ TWG + G LG + ++ +P VN K V + G H++AL DG
Sbjct: 904 CISNQGQILTWGRGNRGQLGHSS-FENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGR 962
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
V++WG D G +GL Q +P + S+ G + +I +G H ++TS G + GC
Sbjct: 963 VFSWGFGED--GQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGC 1020
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-------YNTFISSKG 251
+L T ++ + FL R+ + V ++ I+ G
Sbjct: 1021 NIDHRLMNKTNQNQFLPCITELEFL--------RQEYGSDYNAVKASLGVNHSAVITKNG 1072
Query: 252 SILAFGLNNYSQLGEADSE-------VQKSGN---------------------TCFFTPH 283
++ GL N QLG SE +QK+ N C+F
Sbjct: 1073 NLYTSGLGNEGQLGSFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNK- 1131
Query: 284 LIKSLSDK-KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV--SEPVTEPTPIPS 340
+ + K K ++ G +L +N + ++Y+FG+ Y RLG ++ ++ V EP I S
Sbjct: 1132 -VNFFNKKNKAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEPKLIES 1190
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
L++ ITS++ G + AI ++G +Y WG QLG G
Sbjct: 1191 LKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLG 1229
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 55/364 (15%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGP--DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
C + G +LT G+G+ GQLG + + + +V V G HT+ L+ DG+
Sbjct: 904 CISNQGQILTWGRGNRGQLGHSSFENCLLPTPVNFFSKMS-IVSVGCGWQHTLALSNDGR 962
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
V++WG ++G LG + S+ PQ +N + QI+AG SHS + +G +G
Sbjct: 963 VFSWGFGEDGQLGL-GDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCN 1021
Query: 148 RDSHGSMGLKGEGIQKTPLKLE---------SVSGIVKIASGADHFVMLTSRGNLLTAGC 198
D H M + Q P E S VK + G +H ++T GNL T+G
Sbjct: 1022 ID-HRLMNKTNQN-QFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGL 1079
Query: 199 PEQGQLGR----------ITQRSASRNAR----------------RGMSFLEPGEVPLKR 232
+GQLG + Q++++ + R F + K
Sbjct: 1080 GNEGQLGSFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNKVNFFNKKN 1139
Query: 233 KHID----DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
K I D FT V I+ + + +FG +Y +LG D +Q + N + P LI+SL
Sbjct: 1140 KAIQVSCGDSFTLV----INEQSQVYSFGKGSYYRLGHLD--IQTNQNV--YEPKLIESL 1191
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
+ K T +++G H++A+ ++GK+Y +G + Y +LGL + + +PT + L +
Sbjct: 1192 KNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQ 1251
Query: 349 IACG 352
+CG
Sbjct: 1252 SSCG 1255
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 189/442 (42%), Gaps = 72/442 (16%)
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWG 145
+G +Y WG +G LG E E +F PQ + P +A Q+S G HS + G + WG
Sbjct: 859 NGIIYIWGNGKDGRLGIEGEKPFKF-PQII--PNIQACQVSLGYHHSACISNQGQILTWG 915
Query: 146 SFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
R + G +G + TP+ S IV + G H + L++ G + + G E GQ
Sbjct: 916 --RGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQ 973
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYS 262
LG S+N+ + ++ LE + + G +++ I+S+G + FG N
Sbjct: 974 LG--LGDYQSQNSPQFINSLEG-------YFVTQINAGHSHSSVITSEGIFMMFGCN--- 1021
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSL--------SDKKFTMLASGQHHSLALNSEGKIYA 314
D + N F P I L SD + G +HS + G +Y
Sbjct: 1022 ----IDHRLMNKTNQNQFLP-CITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYT 1076
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT--------------------ITSIACGNC 354
G + G+LG ++E TP + K I N
Sbjct: 1077 SGLGNEGQLG-----SFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNK 1131
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV--SEPVT 412
V+F + + G+ + L ++N + ++Y+FG+ Y RLG ++ ++ V
Sbjct: 1132 VNF-FNKKNKAIQVSCGDSFTL-------VINEQSQVYSFGKGSYYRLGHLDIQTNQNVY 1183
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEG 471
EP I SL++ ITS++ G + AI ++G +Y WG QLG G E D +P K+
Sbjct: 1184 EPKLIESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKV-- 1241
Query: 472 KQLNNYTVLQVASGGQHSVILA 493
+L+ V Q + G H+ +L
Sbjct: 1242 TKLSGLNVKQSSCGYFHTSVLV 1263
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
G F P +I ++ + ++ G HHS ++++G+I +GR + G+LG + E
Sbjct: 877 GEKPFKFPQIIPNIQACQVSL---GYHHSACISNQGQILTWGRGNRGQLGHSSF-ENCLL 932
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
PTP+ +I S+ CG + A+ ++G ++ WG G QLG G
Sbjct: 933 PTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLGLG--------------- 977
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
DY + P I SL+ +T I G+ S I SEG+ +G ++
Sbjct: 978 ---DY---------QSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHR 1025
Query: 455 LGNGKEDDILEPMKIEGKQL-----NNYTVLQVASGGQHSVILAK 494
L N + P E + L ++Y ++ + G HS ++ K
Sbjct: 1026 LMNKTNQNQFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITK 1070
>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 671
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 196/456 (42%), Gaps = 85/456 (18%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T GG + T G D G+LG+G ++ + L NVV + G H++ ++ DG V++W
Sbjct: 4 TQGGALWTWGGNDDGRLGIGA-TGDQNLPVQLSYLSNVVSLAGGEKHSLAVSGDGSVWSW 62
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAV------------------------------ 123
G N G LG E+ P +V P A+
Sbjct: 63 GSNSAGQLGVES-----LTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFK 117
Query: 124 -------------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
++AG S+ L DGTV++WG +++ ++GL + TP K+E+
Sbjct: 118 TAPGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGC--NTYATLGLGDRVDRNTPQKVEA 175
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+S V +A+G DH + LT G++ + G GQLG + + + P
Sbjct: 176 LSNAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYES-----------TPK 224
Query: 231 KRKHIDDVFTGVYNTF----ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
K + I +V T+ ++ G++ ++G N++ QLG D + + P ++
Sbjct: 225 KVEAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDA-------PQKVE 277
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+LS + +G +HSLA+ +G+++A+G + G+LGL ++ + P + +L +
Sbjct: 278 ALS--NVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDR-DAPQKVEAL--SNV 332
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN-------SEGKIYAFGRHDY 399
+I G + A+ +G ++ WG Q+G G+ + N S+ Y F D
Sbjct: 333 VAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGEGQSLYNEPVHVIYSDENFYLFYDIDG 392
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
L T T +D AC NC++
Sbjct: 393 DGLDDDLFDNCPTMATADQEDRDGDGVGDACDNCIN 428
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 195/416 (46%), Gaps = 67/416 (16%)
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
+ +T+ G ++TWG ND+G LG A GD + +P ++ V ++ G+ HS+A+ DG+V
Sbjct: 1 MAVTQGGALWTWGGNDDGRLGIGATGD-QNLPVQLSYLSNVVSLAGGEKHSLAVSGDGSV 59
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN---LLTAGC 198
++WGS +S G +G++ TP + ++ + + SG D + + G+ + C
Sbjct: 60 WSWGS--NSAGQLGVE----SLTPASV--LAPVHALYSGDDFHLFYDTDGDGTGDICDDC 111
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
P S NA VP+ ++ + + G++ ++G
Sbjct: 112 PYD-PFKTAPGLSGCGNA-----------VPMLAAGTQ------FSLGLKTDGTVWSWGC 153
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N Y+ LG D V ++ TP +++LS+ LA+G H+LAL +G ++++G +
Sbjct: 154 NTYATLGLGD-RVDRN------TPQKVEALSNA--VALAAGDDHTLALTRDGSVWSWGWN 204
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
G+LGL ++ E E TP +T+IA + A+ +G ++ WG + QLG
Sbjct: 205 YNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGM 264
Query: 379 GKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
G ++D + +G+++A+G + G+LGL ++ + P
Sbjct: 265 GDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDR-DAP 323
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-EPMKI 469
+ +L + +I G + A+ +G ++ WG Q+G G+ + EP+ +
Sbjct: 324 QKVEAL--SNVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGEGQSLYNEPVHV 377
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN 70
K+ E S + ++ T + T G V + G D GQLG+G D +R VE L N
Sbjct: 224 KKVEAISNVTAIAAQTYHT-QALTRDGNVWSWGSNDFGQLGMG-DQNDRDAPQKVEALSN 281
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
VV + GG H++ +T DG+V+ WG N EG LG D + PQ V V I+AG
Sbjct: 282 VVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRD-APQKVEALSNVVAINAGGD 340
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKL 168
H++AL DG+V+AWG ++ G +G +G+ + P+ +
Sbjct: 341 HTLALTRDGSVWAWG--KNGRGQIGTGEGQSLYNEPVHV 377
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 166/333 (49%), Gaps = 29/333 (8%)
Query: 54 PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP 113
P ++E +T + + +V EV GG H++ L EDG+VYT G N +G LG E EG P
Sbjct: 79 PIILEPRTSGFIHE-RSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK---P 134
Query: 114 QTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLES 170
+ + + + ++ G+SHS+AL + G +++WG+ D G +GL E P ++
Sbjct: 135 EQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSD--GQLGLTTTEDSVAVPRLIKK 192
Query: 171 VSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
++ I++++ G H + L + G G GQLG + + + +R S +
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSL---DGI 249
Query: 229 PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
PL + V G ++F +S G++ +G N QLG +D + ++S P +K
Sbjct: 250 PLAQ-----VAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRES-------PCHVKL 297
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
L +K ++ G H+ L G ++ FG G+LG + ++ V P + L ++
Sbjct: 298 LRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVN-PRRVLELMGSEVS 356
Query: 348 SIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
IACG + A + S G++Y +G G QLG+G
Sbjct: 357 QIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSG 389
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 172/412 (41%), Gaps = 71/412 (17%)
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE-SVSGIV------KIASGADHFVML 187
L+ + WG + S G G P+ LE SG + ++A G +H + L
Sbjct: 54 FLKGKKMLCWG-----YWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFL 108
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF- 246
G + T G +GQLG ++ S+ + G L +HI V G ++
Sbjct: 109 LEDGEVYTCGVNTKGQLGH--EKEGSKPEQIG---------ALADQHIIHVACGESHSLA 157
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+S +G + ++G + QLG +E + P LIK L+ + ++ G H LAL
Sbjct: 158 LSDQGRLFSWGAGSDGQLGLTTTEDSVA------VPRLIKKLNQEMILQVSCGNWHCLAL 211
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++G+ +A+G++ +G+LGL P + SL + +A G SFA+ G ++
Sbjct: 212 AADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVF 271
Query: 367 GWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYG 400
GWG QLG E D +L G ++ FG G
Sbjct: 272 GWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCG 331
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGK 459
+LG + ++ V P + L ++ IACG + A + S G++Y +G G QLG+G
Sbjct: 332 QLGHDSFNDEVN-PRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGH 390
Query: 460 EDDIL-------------EPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
++ EP+ +Y V + SGG + +L + N
Sbjct: 391 TCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVLCSEREN 442
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 32/298 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG GQLG + + + + D +++ V G H++ L++ G++++WG
Sbjct: 112 GEVYTCGVNTKGQLGHEKEGSKPEQIGALAD-QHIIHVACGESHSLALSDQGRLFSWGAG 170
Query: 97 DEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG DS +P+ + + +Q+S G+ H +AL DG +AWG ++SHG +
Sbjct: 171 SDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWG--QNSHGQL 228
Query: 155 GLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E Q +P +++S+ GI ++A+G H L+ G + G GQLG ++
Sbjct: 229 GLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQD 288
Query: 212 ASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGE--A 267
P V L R + + + G +T + +K G + FG + QLG
Sbjct: 289 RE----------SPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSF 338
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ EV P + L + + +A G+ H+LA S G IYAFG G+LG
Sbjct: 339 NDEV---------NPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLG 387
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 155/368 (42%), Gaps = 39/368 (10%)
Query: 37 GVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNV------VEVVVGGMHTVCLTEDGK 89
G G GQL P DV +KT + D +V G H + + +G
Sbjct: 811 GNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGI 870
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLEDGTVYAWG 145
VY+WG ND G LG D + PQ V P KAVQ+SAG + S A+ + VY WG
Sbjct: 871 VYSWGRNDHGQLGDGTTTD-RYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWG 929
Query: 146 SFRDSHG-----SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
S G S K P V+++ + L + GN+ T G
Sbjct: 930 SESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNT 989
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
GQLG T S S + P +P + + G ++ I + G+ +G N
Sbjct: 990 NGQLGNGTSDSTSYAS-------NPARLPSQSFQASQISAGSWHALAIDTDGNTWTWGYN 1042
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK----KFTMLASGQHHSLALNSEGKIYAF 315
Y QLG+ + + + P +++ +D K T +++G HSL ++ +G ++A+
Sbjct: 1043 GYGQLGDGSTSDK-------YKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAW 1095
Query: 316 GRHDYGRLGLKNV---SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
G + G+LG+ N ++P T P Q + G S AI +G L+ WG
Sbjct: 1096 GWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQ 1155
Query: 373 GYQLGNGK 380
QLGN +
Sbjct: 1156 YGQLGNNQ 1163
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 173/402 (43%), Gaps = 49/402 (12%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPKKA------VQI 125
+V GG ++ + DG Y WG N G L ++ A+ + P + LP A Q+
Sbjct: 796 QVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQV 855
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG----IVKIASGA 181
+AGDSH +A+ +G VY+WG R+ HG +G + P ++ G V++++G
Sbjct: 856 AAGDSHVLAIGSNGIVYSWG--RNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGV 913
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+ S + T G G+ + +N PG+ L + ++
Sbjct: 914 ADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQT-LHAVQVSLNWSF 972
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQ 300
V + + G++ +G N QLG S+ +T + + P + S S + + +++G
Sbjct: 973 VM--ALDADGNVYTWGYNTNGQLGNGTSD-----STSYASNPARLPSQSFQA-SQISAGS 1024
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKTITSIACGNCVSF 357
H+LA++++G + +G + YG+LG + S+ P T P + Q T I+ G S
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSL 1084
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
+D +G L+ WG NS G++ G N ++P T P
Sbjct: 1085 VVDRDGSLWAWGW---------------NSNGQL--------GIGNTVNQTKPATIKDPA 1121
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
Q + G S AI +G L+ WG QLGN +
Sbjct: 1122 NKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQYGQLGNNQ 1163
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 36/322 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD----NVVEVVVGGMHTVCLTEDGKVYT 92
G+V + G+ D GQLG G +R V+D V+V G + + + +VYT
Sbjct: 869 GIVYSWGRNDHGQLGDG-TTTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYT 927
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKK------AVQISAGDSHSVALLEDGTVYAWGS 146
WG G A + P P AVQ+S S +AL DG VY WG
Sbjct: 928 WGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWG- 986
Query: 147 FRDSHGSMG---LKGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
+++G +G P +L S S +I++G+ H + + + GN T G G
Sbjct: 987 -YNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGNTWTWGYNGYG 1045
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNY 261
QLG ++ + + + P + K + GV ++ + + GS+ A+G N+
Sbjct: 1046 QLGD----GSTSDKYKPQTVQNPTDTSQSLKATQ-ISAGVDHSLVVDRDGSLWAWGWNSN 1100
Query: 262 SQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLA----SGQHHSLALNSEGKIYAFG 316
QLG GNT T P IK ++K T A +GQ HSLA+ +G ++A+G
Sbjct: 1101 GQLGI--------GNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWG 1152
Query: 317 RHDYGRLGLKNVSEPVTEPTPI 338
+ YG+LG + T P P+
Sbjct: 1153 DNQYGQLGNNQTATRNTTPMPV 1174
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 168/415 (40%), Gaps = 50/415 (12%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI-----PQTVNLPKKAVQISA 127
+V G H + + DG +Y+WG ND G LG + PQ V+ VQ SA
Sbjct: 238 QVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQASA 297
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP----LKLESVSGIV--KIASGA 181
G SV L DG +Y+WG +++G +G TP L + SG + A G+
Sbjct: 298 GYLFSVGLGSDGKLYSWGD--NTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGS 355
Query: 182 DHFVMLTSRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
H + L S GNL + G + QL G T+R A + P VP
Sbjct: 356 LHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAP------IQVKMPSGVPSGFAWKQMSG 409
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS-LSDKKFTMLAS 298
G ++ + S I +G N ++G K TP + S + +F M
Sbjct: 410 WGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQM--- 466
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTPIPSLQDKTITSIACGNCV 355
G ++S A+ S+G IY +G G +G +V P P L + + ++ +
Sbjct: 467 GDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVA 526
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
S AI S+G LY WG N QLG+ R V+ P PT
Sbjct: 527 SLAIGSDGNLYSWGANNNGQLGDNTTTQ-----------------RNTPIRVAAPQNAPT 569
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+ +Q + A + SF + S+G LY WG QLG+ +D P ++
Sbjct: 570 GLTWVQ-----ASAGWDNNSFGLASDGNLYSWGKNANGQLGDNTTNDRHIPGRVN 619
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 168/396 (42%), Gaps = 56/396 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV------VEVVVGGMHTVCLTEDGKV 90
G + + G D GQLG G ER V+ V V+ G + +V L DGK+
Sbjct: 253 GNLYSWGSNDHGQLGDG-TTAERHEPVPVKKPQGVSQDFTWVQASAGYLFSVGLGSDGKL 311
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QISAGDSHSVALLEDGTVYAW 144
Y+WG N G LG + + P+ VNLP+ A Q + G H++ L DG +Y+W
Sbjct: 312 YSWGDNTYGQLGNNTT-TAHYTPEPVNLPQNAPSGFTWKQEAVGSLHALGLGSDGNLYSW 370
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIV------KIASGADHFVMLTSRGNLLTAGC 198
G + H +G + P++++ SG+ +++ H + L S + G
Sbjct: 371 GD--NDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSLALGSDNWIYGWGA 428
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
+G++G S + N + P VP Y+ I S G+I +
Sbjct: 429 NTRGEVGT---GSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYSQAIGSDGNIYTW-G 484
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPH-LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ S V G T P+ ++ + S K+ ++L+ SLA+ S+G +Y++G
Sbjct: 485 YGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVA---SLAIGSDGNLYSWGA 541
Query: 318 HDYGRLGLKN---------VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
++ G+LG V+ P PT + +Q + A + SF + S+G LY W
Sbjct: 542 NNNGQLGDNTTTQRNTPIRVAAPQNAPTGLTWVQ-----ASAGWDNNSFGLASDGNLYSW 596
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
G QLG+ +D RH GR+ +
Sbjct: 597 GKNANGQLGDNTTND------------RHIPGRVNM 620
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 159/383 (41%), Gaps = 62/383 (16%)
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
L G+ + TP + ++++G + + S GN G + GQL Q+ A +
Sbjct: 776 LGGQHVTITPPTINRGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLA---QKPADVS 832
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGV-------YNTFISSKGSILAFGLNNYSQLGEAD 268
++ P +PL D FT + I S G + ++G N++ QLG+
Sbjct: 833 MQK-----TPVRIPLP-DGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGT 886
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKF--TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
+ T + P +K + F +++G S A++SE ++Y +G G+
Sbjct: 887 T-------TDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTP 939
Query: 327 NVSEPVTEPTPI--PSLQDKTITSIACGNCVSF--AIDSEGVLYGWGMGNGYQLGNGKED 382
S PTP P +T+ ++ SF A+D++G +Y WG QLGNG D
Sbjct: 940 AYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSD 999
Query: 383 DI----------------------------LNSEGKIYAFGRHDYGRLGLKNVSE---PV 411
++++G + +G + YG+LG + S+ P
Sbjct: 1000 STSYASNPARLPSQSFQASQISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQ 1059
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE- 470
T P + Q T I+ G S +D +G L+ WG + QLG G + +P I+
Sbjct: 1060 TVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATIKD 1119
Query: 471 -GKQLNNYTVLQVASGGQHSVIL 492
+ + ++ ++G HS+ +
Sbjct: 1120 PANKAQTFKAVRSSAGQLHSLAI 1142
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 43/239 (17%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS---EPVTEPTPIPSLQDKTITS 348
+F+ +++G+ H LA+ S+G +Y++G +D+G+LG + EPV P QD T
Sbjct: 235 RFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQ 294
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-----------------------KEDDI- 384
+ G S + S+G LY WG QLGN K++ +
Sbjct: 295 ASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVG 354
Query: 385 ------LNSEGKIYAFGRHDYGRLGLKNVSE-----PVTEPTPIPSLQDKTITSIACGNC 433
L S+G +Y++G +D+ +LG +E V P+ +PS ++
Sbjct: 355 SLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPS--GFAWKQMSGWGW 412
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQ--LNNYTVLQVASGGQHS 489
S A+ S+ +YGWG ++G G D+ + P++I Q +N+T Q G +S
Sbjct: 413 HSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYS 471
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 72/401 (17%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + ++A G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSIL 254
G + QLG + P +P L+ I + G ++ +S G +L
Sbjct: 65 GSNDYSQLGH------------DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVL 112
Query: 255 AFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N+ QLG A D E+ + P +++ L K +A G +HSLAL S G++Y
Sbjct: 113 SWGDNDCGQLGHATDKEIVQ-------LPKVVRQLVTKTVVQIACGNNHSLALTSCGELY 165
Query: 314 AFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++G + YG+LG+ + ++ P + +L + +IACG SF I G ++GWG
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 372 NGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLK 405
N QLG E + L +EG ++ G YG+LG
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG-H 284
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDIL 464
S P + L TIT +ACGN + A + S G +Y +G+G+ QLG ++
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLM 344
Query: 465 EPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
P + G ++ + + Q+ SGG S++
Sbjct: 345 LPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIV 385
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PSQ + AV + C T G V CG D QLG D+ ++
Sbjct: 26 EQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG--HDLPTKRPLL 83
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E D V+ ++ G H++ L++ G+V +WG ND G LG + + +P+ V + K
Sbjct: 84 IPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTK 143
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGI--V 175
VQI+ G++HS+AL G +Y+WGS + +G +G+ PL+L ++ GI
Sbjct: 144 TVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 201
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H +++ G + G GQLG T RS + G+ F+ G+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGD-- 259
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++++G + G Y QLG S + P ++ L
Sbjct: 260 ------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMELM 300
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
T +A G H+LAL S G++YAFG G+LG ++
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRS 339
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 143/305 (46%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P + V G +T F+++ G + A G N+YSQLG D ++
Sbjct: 29 LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH-DLPTKR------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D + G HSLAL+ G++ ++G +D G+LG E V P +
Sbjct: 81 -PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG +D
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP 199
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + + PT + +L+ + +ACG
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNR-SYPTQLKTLRTLGVRFVACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 316
Query: 492 LAKPK 496
L +
Sbjct: 317 LVPSR 321
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ D V +V G HT+ LT GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGK 60
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY G ND LG + IP+ + +QI G HS+AL + G V +WG
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPLLIPELQDY--VIIQICCGSRHSLALSDWGQVLSWGD-- 116
Query: 149 DSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G G K ++L V +V+IA G +H + LTS G L + G G
Sbjct: 117 ---NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG + + + + +PL G ++ IS G++ +G NN
Sbjct: 174 QLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRNNCG 228
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG D E +S P +K+L +A G S+ L +EG ++ G YG+
Sbjct: 229 QLGLND-ETNRS------YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG S P + L TIT +ACGN + A+
Sbjct: 282 LG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL----------------------- 317
Query: 383 DILNSEGKIYAFGRHDYGRLGLKN 406
+ S G++YAFG G+LG ++
Sbjct: 318 --VPSRGRVYAFGLGSSGQLGTRS 339
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ IP D + +ACG+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGH---------------- 49
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +DY +LG P P IP LQD I I
Sbjct: 50 ----------RHTLFLTATGKVYACGSNDYSQLG---HDLPTKRPLLIPELQDYVIIQIC 96
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG + QLG+ + +I++ K+ +QL TV+Q+A G HS
Sbjct: 97 CGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVV-RQLVTKTVVQIACGNNHS 155
Query: 490 VIL 492
+ L
Sbjct: 156 LAL 158
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 65/395 (16%)
Query: 90 VYTWGCNDEGALGRE-AEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
++ WG G LG E ++ F P+ VN K + QI+ GD++++A+ ++G VY+ G+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI-----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ HG +G +K +L+ +SGI K A G+ H +++ G L + G +
Sbjct: 61 --NDHGQLGQ-----EKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVE 113
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
GQLG R + EP V L K I + G+ ++ +++ G + A+G N
Sbjct: 114 GQLGL---------DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSN 164
Query: 260 NYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ QLG +D++++ P L+ SL+ +A G +H++ ++ G ++A+GR+
Sbjct: 165 SDGQLGLGSDTKME-------LKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRN 217
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G+LGL ++ P + +L++ + ACG S + +G ++ G G QLG+
Sbjct: 218 TFGQLGLSDIQNR-NVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGH 276
Query: 379 G-KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G K +IL P I L T+T I+CG + A
Sbjct: 277 GNKTSEIL----------------------------PRQIMELMGSTVTQISCGRRHTLA 308
Query: 438 -IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ S G +Y WG+G QLGN + P + G
Sbjct: 309 LVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFG 343
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 165/340 (48%), Gaps = 29/340 (8%)
Query: 48 GQLGLGPDVMERKTFAL----VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR 103
G+LGLG + + F E + + ++ G +T+ +T++G+VY+ G ND G LG+
Sbjct: 10 GELGLG-GIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQ 68
Query: 104 EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQ 162
E + ++ P + + G SH++ + E G +++WGS + G +GL +
Sbjct: 69 EKGRKRLQLISGID-PLAFRKAACGSSHTLVVNEWGQLFSWGS--NVEGQLGLDRVSATI 125
Query: 163 KTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM 220
+ P ++++ IV+IA G H + LT+ G L G GQLG + +
Sbjct: 126 REPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVH 185
Query: 221 SFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCF 279
S VP I V G Y+T + SK G++ A+G N + QLG +D + +
Sbjct: 186 SL---AAVP-----IAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN------ 231
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P +++L + + A G+ S+ L +G ++ G YG+LG N + + P I
Sbjct: 232 -VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL-PRQIM 289
Query: 340 SLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGN 378
L T+T I+CG + A + S G +Y WG+G QLGN
Sbjct: 290 ELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGN 329
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 41/305 (13%)
Query: 221 SFLEPGEVPL-KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
+ P EV K I+ + G Y ++ +G + + G N++ QLG Q+ G
Sbjct: 21 NIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLG------QEKGRKR 74
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
LI + F A G H+L +N G+++++G + G+LGL VS + EP +
Sbjct: 75 L---QLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMV 131
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
+L K I IACG S A+ + G LY WG + QLG G +
Sbjct: 132 KTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVP 191
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++A+GR+ +G+LGL ++ P + +L++ + ACG
Sbjct: 192 IAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNR-NVPCQLRTLRNSRVCYAACG 250
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S + +G ++ G G QLG+G + + P +I +L TV Q++ G +H++
Sbjct: 251 EEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQI--MELMGSTVTQISCGRRHTLA 308
Query: 492 LAKPK 496
L +
Sbjct: 309 LVPSR 313
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 146/318 (45%), Gaps = 45/318 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVY 91
T G V +CG D GQLG RK L+ +D + + G HT+ + E G+++
Sbjct: 50 TKEGQVYSCGNNDHGQLGQEKG---RKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLF 106
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG N EG LG + + P+ V K VQI+ G HS+AL +G +YAWGS +
Sbjct: 107 SWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGS--N 164
Query: 150 SHGSMGLKGE-GIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG- 205
S G +GL + ++ P + S++ I +A G H ++++ G + G GQLG
Sbjct: 165 SDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGL 224
Query: 206 -RITQRSAS------RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
I R+ RN+R + + GE ++ F++ G + G
Sbjct: 225 SDIQNRNVPCQLRTLRNSR--VCYAACGE--------------EFSVFLTMDGGVFTCGA 268
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGR 317
Y QLG + T P I L T ++ G+ H+LAL S G++YA+G
Sbjct: 269 GMYGQLGHGNK-------TSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGL 321
Query: 318 HDYGRLGLKNVSEPVTEP 335
G+LG +++ T P
Sbjct: 322 GGAGQLG-NRIAQNSTTP 338
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLT-EDGK 89
T G V TCG G GQLG G +++ R+ L+ V ++ G HT+ L G+
Sbjct: 258 TMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMG--STVTQISCGRRHTLALVPSRGR 315
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV 116
VY WG G LG +S PQ V
Sbjct: 316 VYAWGLGGAGQLGNRIAQNST-TPQVV 341
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 181/385 (47%), Gaps = 37/385 (9%)
Query: 22 VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGM 79
+T++ L K G V G GD G+LGL + + L L++ V GG
Sbjct: 13 LTAKNKVELSGKAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGA 71
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLED 138
HT+ LT+ G+V+ G N G LG + +S F P V+ P V I+AG HS A+
Sbjct: 72 HTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAAITSS 131
Query: 139 GTVYAWGSFRDSHGSMGL--KGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLL 194
G Y WG R+S G +GL + + + TP K+ES++G + +A G DH + L G +L
Sbjct: 132 GETYVWG--RNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVL 189
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGS 252
+ G G LG + + + + + P + L++ I V G V++ G+
Sbjct: 190 SWGTNRFGCLGH-GEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGT 248
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +FG + QLG + N P I L + + ++ G +H+ A+ +G I
Sbjct: 249 IYSFGQGSMCQLGLGN-------NNDASQPCPIPDL--PRVSSISCGGYHTGAITQDGDI 299
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
Y +G +++G LG + ++P + SL + ++ I+CG + AI S+G ++ WG G
Sbjct: 300 YTWGSNEHGCLG--SGFRASSKPLRLESLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGG 356
Query: 373 GY------------QLGNGKEDDIL 385
Y QLG G + D
Sbjct: 357 SYGTYATQAESSGGQLGVGTDFDFF 381
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 189/431 (43%), Gaps = 81/431 (18%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
V WG D+G LG +E S+F P + +S G +H++ L + G V+A
Sbjct: 30 VALWGNGDQGRLGL-SESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFA---- 84
Query: 148 RDSHGSMGLKGEGIQKTPLKLES------VSGI----VKIASGADHFVMLTSRGNLLTAG 197
GL G PLK ES V G V IA+G H +TS G G
Sbjct: 85 ------TGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWG 138
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILA 255
+GQLG + +R+ S ++ P ++ L + + G ++ ++ G +L+
Sbjct: 139 RNSEGQLG-LGKRAKS-------VYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLS 190
Query: 256 FGLNNYSQLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G N + LG E +T +TP +I L + +++G HS + G IY
Sbjct: 191 WGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGTIY 250
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+FG+ +LGL N ++ ++P PIP L ++SI+CG G
Sbjct: 251 SFGQGSMCQLGLGNNND-ASQPCPIPDL--PRVSSISCG--------------------G 287
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
Y G + +G IY +G +++G LG + ++P + SL + ++ I+CG
Sbjct: 288 YHTG------AITQDGDIYTWGSNEHGCLG--SGFRASSKPLRLESLAEAFMSEISCGWK 339
Query: 434 VSFAIDSEGVLYGWGMGNGY------------QLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
+ AI S+G ++ WG G Y QLG G + D EP+ IE + + L
Sbjct: 340 HTAAI-SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIE--MDDRLSALH 396
Query: 482 VASGGQHSVIL 492
V+ G H+ +
Sbjct: 397 VSCGFNHTAAI 407
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + + GQG QLGLG + + + DL V + GG HT +T+DG +Y
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNN-NDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIY 300
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
TWG N+ G LG S+ + +IS G H+ A + DG +++WG + S+
Sbjct: 301 TWGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAA-ISDGYIFSWG-WGGSY 358
Query: 152 GSMGLKGEG-------------IQKTPLKLESVSGIVKIASGADH 183
G+ + E + P++++ + ++ G +H
Sbjct: 359 GTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNH 403
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 197/481 (40%), Gaps = 59/481 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G R T V L V + G HT + + V WG N
Sbjct: 295 GTVRCWGLNSSGQLGDG-TTERRLTPVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLN 353
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + P +V+ + ++AG H+ ALL+ GTV WG R+ G +G
Sbjct: 354 SSGQLG-DGTTERRLTPVSVSGLSGSTALAAGGVHTCALLQTGTVQCWG--RNEFGQLGD 410
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRN 215
+ TP+ + +SG + +G H + G GQLG T+R +
Sbjct: 411 GTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPV 470
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
G+S G L D + N + +G N+ QLG+ +E +
Sbjct: 471 TVSGLS----GATSLAAG--DGHTCALMNVRTAQ-----CWGRNSSGQLGDGTTERR--- 516
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
TP + LS T LA+G H+ AL ++ +GR+ G+LG ++ VT P
Sbjct: 517 ----LTPVTVSGLS--AATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVT-P 569
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------ 383
+ L T ++A GN + + G + WG + QLG+G D
Sbjct: 570 VAVSGLSGAT--ALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLSG 627
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
L G + +GR+ G+LG ++ VT P + L +T++A G
Sbjct: 628 VTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVT-PAAVSGLSG--VTALAAG 684
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ A+ G + WG + QLG+G D + P + G L+ T L +G H+
Sbjct: 685 ANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVTPAAVSG--LSGVTAL--VAGANHTCA 740
Query: 492 L 492
L
Sbjct: 741 L 741
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 194/474 (40%), Gaps = 57/474 (12%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G +GQLG G R T V L + GG+HT L + G V WG N+ G LG
Sbjct: 351 GLNSSGQLGDG-TTERRLTPVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEFGQLG 409
Query: 103 REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
+ + P V+ A ++AGD H+ A+L+ T WG +S G +G +
Sbjct: 410 -DGTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWG--ENSPGQLGDGTTERR 466
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF 222
TP+ + +SG +A+G H L N+ TA C + G++ + R
Sbjct: 467 LTPVTVSGLSGATSLAAGDGHTCALM---NVRTAQCWGRNSSGQLGDGTTERR------- 516
Query: 223 LEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
L P V + + + +G N+ QLG+ T TP
Sbjct: 517 LTPVTVSGLSAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGT-------RTDRVTP 569
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+ LS T LA+G H+ L G + +G + G+LG ++ VT P + L
Sbjct: 570 VAVSGLSGA--TALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVT-PAAVSGLS 626
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------- 383
+T++A G + A+ G + WG + QLG+G D
Sbjct: 627 G--VTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTPAAVSGLSGVTALAAG 684
Query: 384 -----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L G + +GR+ G+LG ++ VT P + L +T++ G + A+
Sbjct: 685 ANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVT-PAAVSGLSG--VTALVAGANHTCAL 741
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G + WG QLG+G D L P+ + G L+ T L A+G +H+ +
Sbjct: 742 MPTGTVQCWGKNEFGQLGDGTTTDRLTPVAVSG--LSGITAL--AAGSEHTCAV 791
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 201/482 (41%), Gaps = 61/482 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG + R T V L V+ + G HT L + V WG N
Sbjct: 145 GTVQCWGLNSSGQLG-DWTITNRVTPVAVSGLSGVIALAAGDRHTCALLDTRTVRCWGEN 203
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
+ G LG D + P V+ ++AG H+ A L GTV WG + G +G
Sbjct: 204 EHGQLGDGTTND-RWTPVAVSGLSGVTALAAGGRHTCAALNTGTVQCWGG--NGAGQLGD 260
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRN 215
+ TP+ + +SG +A+G +H L G + G GQLG T+R +
Sbjct: 261 GTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLTPV 320
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
A G+S + + G ++T + ++ +GLN+ QLG+ +E +
Sbjct: 321 AVSGLS------------GVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERR-- 366
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
TP + LS T LA+G H+ AL G + +GR+++G+LG +E
Sbjct: 367 -----LTPVSVSGLSGS--TALAAGGVHTCALLQTGTVQCWGRNEFGQLG-DGTTERRLT 418
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN-------- 386
P + L T++ G+ + A+ WG + QLG+G + L
Sbjct: 419 PVVVSGLSGA--TALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGLS 476
Query: 387 -------SEGKIYA---------FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+G A +GR+ G+LG +E P + L T++A
Sbjct: 477 GATSLAAGDGHTCALMNVRTAQCWGRNSSGQLG-DGTTERRLTPVTVSGL--SAATALAA 533
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ + A+ + WG + QLG+G D + P+ + G L+ T L A+G H+
Sbjct: 534 GDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSG--LSGATAL--AAGNSHTC 589
Query: 491 IL 492
L
Sbjct: 590 TL 591
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 203/518 (39%), Gaps = 95/518 (18%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+ + GQLG G +R T V L V + GG HT G V WG N G LG
Sbjct: 201 GENEHGQLGDG-TTNDRWTPVAVSGLSGVTALAAGGRHTCAALNTGTVQCWGGNGAGQLG 259
Query: 103 REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
+ S P V+ A ++AG H+ ALL+ GTV WG +S G +G +
Sbjct: 260 -DGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVRCWG--LNSSGQLGDGTTERR 316
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMS 221
TP+ + +SG+ +A+G H + + G GQLG T+R + + G+S
Sbjct: 317 LTPVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLS 376
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE----------- 270
G L GV+ + G++ +G N + QLG+ +E
Sbjct: 377 ----GSTALAAG-------GVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGL 425
Query: 271 ----------------VQKSGNTCF----------------FTPHLIKSLSDKKFTMLAS 298
+Q C+ TP + LS T LA+
Sbjct: 426 SGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGLSGA--TSLAA 483
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H+ AL + +GR+ G+LG +E P + L T++A G+ + A
Sbjct: 484 GDGHTCALMNVRTAQCWGRNSSGQLG-DGTTERRLTPVTVSGL--SAATALAAGDSHTCA 540
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKIYAF 394
+ + WG + QLG+G D L G + +
Sbjct: 541 LLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCW 600
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
G + G+LG ++ VT P + L +T++A G + A+ G + WG + Q
Sbjct: 601 GWNSSGQLGDGTRTDRVT-PAAVSGLSG--VTALAAGANHTCALMDSGTVQCWGRNSSGQ 657
Query: 455 LGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
LG+G D + P + G L+ T L A+G H+ L
Sbjct: 658 LGDGTRTDRVTPAAVSG--LSGVTAL--AAGANHTCAL 691
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 196/480 (40%), Gaps = 57/480 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R V L V + G HT L G V WG N
Sbjct: 95 GTVWCWGWNGSGQLGDG-TTTDRAMPVAVSGLSGVTALAAGRYHTCALLNTGTVQCWGLN 153
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + + P V+ + ++AGD H+ ALL+ TV WG + HG +G
Sbjct: 154 SSGQLG-DWTITNRVTPVAVSGLSGVIALAAGDRHTCALLDTRTVRCWG--ENEHGQLGD 210
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP+ + +SG+ +A+G H + G + G GQLG T+ SR
Sbjct: 211 GTTNDRWTPVAVSGLSGVTALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTR--TSRLT 268
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+S L G L + + G++ +GLN+ QLG+ +E +
Sbjct: 269 PMAVSGLS-GATALAAGF-------EHTCALLDTGTVRCWGLNSSGQLGDGTTERR---- 316
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
TP + LS T LA+G H+ A+ + +G + G+LG +E P
Sbjct: 317 ---LTPVAVSGLS--GVTALAAGDFHTCAVLQTETVQCWGLNSSGQLG-DGTTERRLTPV 370
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN---------- 386
+ L T++A G + A+ G + WG QLG+G + L
Sbjct: 371 SVSGLSGS--TALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGA 428
Query: 387 ---SEGKIY-----------AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
+ G + +G + G+LG +E P + L TS+A G+
Sbjct: 429 TALTAGDRHTCAVLQTRTAQCWGENSPGQLG-DGTTERRLTPVTVSGLSGA--TSLAAGD 485
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ A+ + WG + QLG+G + L P+ + G L+ T L A+G H+ L
Sbjct: 486 GHTCALMNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSG--LSAATAL--AAGDSHTCAL 541
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 166/405 (40%), Gaps = 65/405 (16%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+ GQLG G R T V L + G HT L WG N G LG
Sbjct: 451 GENSPGQLGDG-TTERRLTPVTVSGLSGATSLAAGDGHTCALMNVRTAQCWGRNSSGQLG 509
Query: 103 REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
+ + P TV+ A ++AGDSH+ ALL+ V WG R+S G +G +
Sbjct: 510 -DGTTERRLTPVTVSGLSAATALAAGDSHTCALLDTRRVRCWG--RNSSGQLGDGTRTDR 566
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS----ASRNARR 218
TP+ + +SG +A+G H L G + G GQLG T+ A+ +
Sbjct: 567 VTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLS 626
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
G++ L G + + G++ +G N+ QLG+ T
Sbjct: 627 GVTALAAGAN--------------HTCALMDSGTVQCWGRNSSGQLGDGT-------RTD 665
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
TP + LS T LA+G +H+ AL G + +GR+ G+LG ++ VT P +
Sbjct: 666 RVTPAAVSGLS--GVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVT-PAAV 722
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
L +T++ G + A+ G + WG QLG+G D
Sbjct: 723 SGLSG--VTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAVSGLSGITA 780
Query: 384 ----------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+LN+ G +GR+ +GRLG+ + + +P+P
Sbjct: 781 LAAGSEHTCAVLNT-GAARCWGRNLFGRLGISPL-----DYSPLP 819
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 185/453 (40%), Gaps = 64/453 (14%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L V+ + G HT L G V+ WG N G LG D +P V+ ++A
Sbjct: 75 LSRVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTD-RAMPVAVSGLSGVTALAA 133
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
G H+ ALL GTV WG +S G +G + TP+ + +SG++ +A+G H L
Sbjct: 134 GRYHTCALLNTGTVQCWG--LNSSGQLGDWTITNRVTPVAVSGLSGVIALAAGDRHTCAL 191
Query: 188 TSRGNLLTAGCPEQGQLGRITQRS----ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ G E GQLG T + + G++ L G G +
Sbjct: 192 LDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLSGVTALAAG--------------GRH 237
Query: 244 NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ G++ +G N QLG+ T TP + LS T LA+G H+
Sbjct: 238 TCAALNTGTVQCWGGNGAGQLGDGT-------RTSRLTPMAVSGLSGA--TALAAGFEHT 288
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
AL G + +G + G+LG +E P + L +T++A G+ + A+
Sbjct: 289 CALLDTGTVRCWGLNSSGQLG-DGTTERRLTPVAVSGLSG--VTALAAGDFHTCAVLQTE 345
Query: 364 VLYGWGMGNGYQLGNGKEDDILN------------------------SEGKIYAFGRHDY 399
+ WG+ + QLG+G + L G + +GR+++
Sbjct: 346 TVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEF 405
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
G+LG +E P + L T++ G+ + A+ WG + QLG+G
Sbjct: 406 GQLG-DGTTERRLTPVVVSGLSGA--TALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGT 462
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ L P+ + G L+ T L A+G H+ L
Sbjct: 463 TERRLTPVTVSG--LSGATSL--AAGDGHTCAL 491
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G +GQLG G +R T A V L V + G HT L + G V WG N
Sbjct: 595 GTVQCWGWNSSGQLGDGTRT-DRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRN 653
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D P V+ ++AG +H+ AL++ GTV WG R+S G +G
Sbjct: 654 SSGQLGDGTRTD-RVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWG--RNSSGQLGD 710
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG------RITQR 210
+ TP + +SG+ + +GA+H L G + G E GQLG R+T
Sbjct: 711 GTTTDRVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPV 770
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+ S G++ L G +H V + G+ +G N + +LG + +
Sbjct: 771 AVS--GLSGITALAAGS-----EHTCAVL---------NTGAARCWGRNLFGRLGISPLD 814
Query: 271 VQKSGNTCFFTPHLI 285
T PH +
Sbjct: 815 YSPLPRTVVIIPHQV 829
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 163/404 (40%), Gaps = 63/404 (15%)
Query: 119 PKKAVQIS--AGDSHSVAL---LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
P +A ++S A D V L L G + W DS GS G K P +S
Sbjct: 21 PAQARKVSDVAIDKRPVKLDRYLYPGVAHTW---IDSTGSEGRLMTNPGKAPASPLPLSR 77
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++ +A+G H L + G + G GQLG T R M G
Sbjct: 78 VIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGT------TTDRAMPVAVSGL-----S 126
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
+ + G Y+T + + G++ +GLN+ QLG D + TP + LS
Sbjct: 127 GVTALAAGRYHTCALLNTGTVQCWGLNSSGQLG--DWTITNR-----VTPVAVSGLS--G 177
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
LA+G H+ AL + +G +++G+LG ++ T P + L +T++A G
Sbjct: 178 VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWT-PVAVSGLSG--VTALAAG 234
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN------------------------SE 388
+ A + G + WG QLG+G L
Sbjct: 235 GRHTCAALNTGTVQCWGGNGAGQLGDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDT 294
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G + +G + G+LG +E P + L +T++A G+ + A+ + WG
Sbjct: 295 GTVRCWGLNSSGQLG-DGTTERRLTPVAVSGLSG--VTALAAGDFHTCAVLQTETVQCWG 351
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ + QLG+G + L P+ + G L+ T L A+GG H+ L
Sbjct: 352 LNSSGQLGDGTTERRLTPVSVSG--LSGSTAL--AAGGVHTCAL 391
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 72/401 (17%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + ++A G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSIL 254
G + QLG + P +P L+ I + G ++ +S G +L
Sbjct: 65 GSNDYSQLGH------------DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVL 112
Query: 255 AFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N+ QLG A D E+ + P +++ L K +A G +HSLAL S G++Y
Sbjct: 113 SWGDNDCGQLGHATDKEIVQ-------LPKVVRQLVTKTVVQIACGNNHSLALTSCGELY 165
Query: 314 AFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++G + YG+LG+ + ++ P + +L + +IACG SF I G ++GWG
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 372 NGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLK 405
N QLG E + L +EG ++ G YG+LG
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG-H 284
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDIL 464
S P + L TIT +ACGN + A + S G +Y +G+G+ QLG ++
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLM 344
Query: 465 EPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
P + G ++ + + Q+ SGG S++
Sbjct: 345 LPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIV 385
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PSQ + AV + C T G V CG D QLG D+ ++
Sbjct: 26 EQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG--HDLPTKRPLL 83
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E D V+ ++ G H++ L++ G+V +WG ND G LG + + +P+ V + K
Sbjct: 84 IPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTK 143
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGI--V 175
VQI+ G++HS+AL G +Y+WGS + +G +G+ PL+L ++ GI
Sbjct: 144 TVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 201
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H +++ G + G GQLG T RS + G+ F+ G+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGD-- 259
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++++G + G Y QLG S + P ++ L
Sbjct: 260 ------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMELM 300
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
T +A G H+LAL S G++YAFG G+LG ++
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRS 339
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 143/305 (46%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P + V G +T F+++ G + A G N+YSQLG D ++
Sbjct: 29 LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH-DLPTKR------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D + G HSLAL+ G++ ++G +D G+LG E V P +
Sbjct: 81 -PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG +D
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP 199
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + + PT + +L+ + +ACG
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNR-SYPTQLKTLRTLGVRFVACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 316
Query: 492 LAKPK 496
L +
Sbjct: 317 LVPSR 321
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ D V +V G HT+ LT GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGK 60
Query: 90 VYTWGCNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY G ND LG + IP+ + +QI G HS+AL + G V +WG
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPLLIPELQDY--VIIQICCGSRHSLALSDWGQVLSWGD-- 116
Query: 149 DSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G G K ++L V +V+IA G +H + LTS G L + G G
Sbjct: 117 ---NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG + + + + +PL G ++ IS G++ +G NN
Sbjct: 174 QLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRNNCG 228
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG D E +S P +K+L +A G S+ L +EG ++ G YG+
Sbjct: 229 QLGLND-ETNRS------YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG S P + L TIT +ACGN + A+
Sbjct: 282 LG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL----------------------- 317
Query: 383 DILNSEGKIYAFGRHDYGRLGLKN 406
+ S G++YAFG G+LG ++
Sbjct: 318 --VPSRGRVYAFGLGSSGQLGTRS 339
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ IP D + +ACG+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGH---------------- 49
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +DY +LG P P IP LQD I I
Sbjct: 50 ----------RHTLFLTATGKVYACGSNDYSQLG---HDLPTKRPLLIPELQDYVIIQIC 96
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG + QLG+ + +I++ K+ +QL TV+Q+A G HS
Sbjct: 97 CGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVV-RQLVTKTVVQIACGNNHS 155
Query: 490 VIL 492
+ L
Sbjct: 156 LAL 158
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 22/326 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
TG G + G + GQLGLG + + + T + V G HT+ TE G VY
Sbjct: 46 TGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYA 105
Query: 93 WGCNDEGALGR-EAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G N EG LG + E S F + K Q++AG S A+ EDG ++ WG +S
Sbjct: 106 AGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGD--NS 163
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +GL E P +++ + I+ G H ++T G L T G PE G+LG + ++
Sbjct: 164 EGQIGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQ 223
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
+N R P VP + ++ V G +T + ++ + FGL Y QLG
Sbjct: 224 --LKNNRV------PQPVPGIMEKVNKVACGGEHTVVLTETDVYTFGLGQYGQLGHGTFI 275
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--KNV 328
+ S P +K L K + G++H+ + G ++ FG +G+LGL +N
Sbjct: 276 FETS------VPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENY 329
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNC 354
+ +PT + T+ +ACG C
Sbjct: 330 TNQF-DPTLCYNFLRFTVLLVACGGC 354
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 184/423 (43%), Gaps = 66/423 (15%)
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGT 140
+C+ E G V+T+G R AE IP K V IS GD H+ + +G
Sbjct: 1 LCVLESGAVFTFG------KSRFAED----IPSKFWFKNDKPVLISCGDEHTAIVTGNGK 50
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-IVKIA-SGADHFVMLTSRGNLLTAGC 198
+Y +GS ++ G +GL + P ++++ K+A G +H ++ T +GN+ AG
Sbjct: 51 LYMFGS--NNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 108
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+GQLG + R+ +SF + I + G Y + ++ G + +G
Sbjct: 109 NSEGQLG--LGDTEERSTFHLISFF------TNQHKIKQLAAGSYTSAAVTEDGQLFVWG 160
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N+ Q+G AD C P + K + ++ G +HS + +G++Y FG
Sbjct: 161 DNSEGQIGLADE-------ACVSVPCQVDV--GKPVSSISCGYYHSALITGDGELYTFGE 211
Query: 318 HDYGRLGLKNVSEPVTE---PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+ G+LGL + E + P P+P + +K + +ACG
Sbjct: 212 PENGKLGL--LPEQLKNNRVPQPVPGIMEK-VNKVACGG--------------------- 247
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
E ++ +E +Y FG YG+LG + P + L+ I +I CG
Sbjct: 248 ------EHTVVLTETDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENH 301
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ + G+++ +G G +LG G+E+ + +TVL VA GG H ++ A
Sbjct: 302 TAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCHMLVFAA 361
Query: 495 PKP 497
P+P
Sbjct: 362 PRP 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN---VVEVVVGGMHTVCLTEDGKV 90
T G V G GQLGLG D ER TF L+ N + ++ G + +TEDG++
Sbjct: 98 TEKGNVYAAGGNSEGQLGLG-DTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQL 156
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+ WG N EG +G E +P V++ K IS G HS + DG +Y +G
Sbjct: 157 FVWGDNSEGQIGLADEACVS-VPCQVDVGKPVSSISCGYYHSALITGDGELYTFG--EPE 213
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIV----KIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G +GL E ++ + + V GI+ K+A G +H V+LT ++ T G + GQLG
Sbjct: 214 NGKLGLLPEQLKNNRVP-QPVPGIMEKVNKVACGGEHTVVLTET-DVYTFGLGQYGQLGH 271
Query: 207 ---ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYS 262
I + S ++ + L+R I ++ G +T ++ G + FG +
Sbjct: 272 GTFIFETSVPKSVKH-----------LRRHKICNITCGENHTAVVAENGLMFTFGDGRHG 320
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+LG + F P L + ++A G H L
Sbjct: 321 KLGLGEENYTNQ-----FDPTLCYNFLRFTVLLVACGGCHMLVF 359
>gi|399218366|emb|CCF75253.1| unnamed protein product [Babesia microti strain RI]
Length = 606
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 156/352 (44%), Gaps = 53/352 (15%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA--------EGDSEFIPQTVNLPKKA 122
+ +V G +HT L EDG VYT+GCND GALGR ++E +P + + K
Sbjct: 217 IKKVACGALHTAVLLEDGTVYTFGCNDLGALGRNVSVIDKAGMSDETEAMP--IKMNDKI 274
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--------PLKL----ES 170
+ I+ GD+H+ L G VY GSF+D+ G +G + T P+K+
Sbjct: 275 IDITCGDNHTCLLTASGDVYLTGSFKDTSGPIGFPDFTSEDTKILDKVTLPMKVVFDKNK 334
Query: 171 VSGIVKIASGADHFVMLTSR-GNLLTAGCPEQGQLGR-ITQRSASRNARRGMSF----LE 224
I I+SG +H V L S G L G E GQL + IT +++ ++ + L
Sbjct: 335 KVTITNISSGENHVVCLNSNTGELYVFGSNEYGQLLQPITDETSNLSSEKLHEIKGKKLY 394
Query: 225 PGEVPLK------------RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEV 271
P + LK + I VFTG T F+++K I G N ++G
Sbjct: 395 PKLIDLKILGLRGSTRSQEAEKIAKVFTGYATTFFVTNKQRIFGCGRNAQGEVG------ 448
Query: 272 QKSGNTCFFT--PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
GN F P + S + K + GQ S+AL G +Y +G+ + +K +
Sbjct: 449 --VGNPMTFIDKPKELTSFNGKSILDIKGGQFFSMALEKGGAVYTWGKTCFSGHSIK--A 504
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+ + P + I G+ SFA S +Y WG G Y LGNG++
Sbjct: 505 KKIMTPKRLNICGKLGAVCIFVGSDYSFAKMSNNNVYAWGSGQNYVLGNGQD 556
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 164/418 (39%), Gaps = 73/418 (17%)
Query: 116 VNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT---------P 165
V KK ++ ++ G H+ LLEDGTVY +G + G++G I K P
Sbjct: 210 VYFRKKPIKKVACGALHTAVLLEDGTVYTFGC--NDLGALGRNVSVIDKAGMSDETEAMP 267
Query: 166 LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE--QGQLGRITQRSASRNARRGMSFL 223
+K+ I+ I G +H +LT+ G++ G + G +G S ++
Sbjct: 268 IKMN--DKIIDITCGDNHTCLLTASGDVYLTGSFKDTSGPIGFPDFTSEDTKILDKVTL- 324
Query: 224 EPGEVPL---KRKHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQL--------GEADSE 270
P +V K+ I ++ +G + S+ G + FG N Y QL SE
Sbjct: 325 -PMKVVFDKNKKVTITNISSGENHVVCLNSNTGELYVFGSNEYGQLLQPITDETSNLSSE 383
Query: 271 VQKSGNTCFFTPHLI-----------KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
P LI +S +K + +G + + ++ +I+ GR+
Sbjct: 384 KLHEIKGKKLYPKLIDLKILGLRGSTRSQEAEKIAKVFTGYATTFFVTNKQRIFGCGRNA 443
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
G +G+ N + +P + S K+I I G S A++ G +Y WG
Sbjct: 444 QGEVGVGNPMTFIDKPKELTSFNGKSILDIKGGQFFSMALEKGGAVYTWGKT-------- 495
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
F H ++ + P + I G+ SFA
Sbjct: 496 -------------CFSGHSIK-------AKKIMTPKRLNICGKLGAVCIFVGSDYSFAKM 535
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILE-PMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
S +Y WG G Y LGNG++ + + P+ ++ +L TV ++ G QH+V P+
Sbjct: 536 SNNNVYAWGSGQNYVLGNGQDIEFQQKPVLVDLGKLG--TVTSISGGAQHTVFHVIPE 591
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 39 VLTCGQGDTGQLGLG-PDVMERKTFALVE-DLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
+ CG+ G++G+G P K L + +++++ G ++ L + G VYTWG
Sbjct: 436 IFGCGRNAQGEVGVGNPMTFIDKPKELTSFNGKSILDIKGGQFFSMALEKGGAVYTWG-- 493
Query: 97 DEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G + P+ +N+ K AV I G +S A + + VYAWGS ++
Sbjct: 494 KTCFSGHSIKAKKIMTPKRLNICGKLGAVCIFVGSDYSFAKMSNNNVYAWGSGQNYVLGN 553
Query: 155 GLKGEGIQKTPL-KLESVSGIVKIASGADHFVM 186
G E QK L L + + I+ GA H V
Sbjct: 554 GQDIEFQQKPVLVDLGKLGTVTSISGGAQHTVF 586
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 46/175 (26%)
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P PI + K I +ACG +L +G +Y F
Sbjct: 206 PNPIVYFRKKPIKKVACG--------------------------ALHTAVLLEDGTVYTF 239
Query: 395 GRHDYGRLGLKNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
G +D G LG +NVS TE PI + DK I I CG+ + + + G +Y
Sbjct: 240 GCNDLGALG-RNVSVIDKAGMSDETEAMPI-KMNDKII-DITCGDNHTCLLTASGDVYLT 296
Query: 448 GMGN------GYQLGNGKEDDILE----PMKIEGKQLNNYTVLQVASGGQHSVIL 492
G G+ ++ IL+ PMK+ + T+ ++SG H V L
Sbjct: 297 GSFKDTSGPIGFPDFTSEDTKILDKVTLPMKVVFDKNKKVTITNISSGENHVVCL 351
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 155/355 (43%), Gaps = 54/355 (15%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL-----KLESVSGIVKI 177
V+ S D + +E VY WGS R+ L +K PL KL I
Sbjct: 109 VEKSRTDPYKEMRVEPSEVYVWGSKRN------LLLAADEKNPLEPDKSKLLENLDPSDI 162
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
A G D +++ G + G G LG N R + L P V H
Sbjct: 163 ACGYDSLFVVSRNGGIFACGKGHMGCLG--LGNCDDVNVPRQIPQLLPVMVTTVAIHPG- 219
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTC-FFTPHLIKSLSDKKFTML 296
G + ++++G + ++G + QLG GNT + P LI L K+ T +
Sbjct: 220 ---GRHAMALTAEGKVYSWGCGDRGQLGH--------GNTLGYLDPTLIDELKSKEVTKI 268
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A G HS+A+ S+GKI+++G G LG N + P I SL K I ++ACG C +
Sbjct: 269 ACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLL-PKKIMSLNGKHIMAVACGECYT 327
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
A+ + V + WG+G +LG G E PT
Sbjct: 328 IAVAGDDV-WSWGLGGNGELGYGVE--------------------------MPSYYMPTK 360
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
I +L K IT++ACG SFA+ + G ++ WG G+ ++LG G E I++P +I+G
Sbjct: 361 IEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQG 415
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 32/299 (10%)
Query: 37 GVVLTCGQGDTGQLGLG--PDV-MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G + CG+G G LGLG DV + R+ L+ + V + GG H + LT +GKVY+W
Sbjct: 176 GGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSW 235
Query: 94 GCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
GC D G LG D I + + K+ +I+ G HS+A+L DG +++WG S
Sbjct: 236 GCGDRGQLGHGNTLGYLDPTLIDELKS--KEVTKIACGAMHSIAVLSDGKIFSWGD--GS 291
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G++G Q P K+ S++G I+ +A G + + + + ++ + G G+LG
Sbjct: 292 NGALGHGNNLAQLLPKKIMSLNGKHIMAVACG-ECYTIAVAGDDVWSWGLGGNGELGYGV 350
Query: 209 QRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ S+ P ++ L K I +V G +F +S+ G + A+G + +LG
Sbjct: 351 EMP---------SYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGL 401
Query: 267 ADSEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+ +V P I+ L KK + + H+LA++ G++Y +G + G +G
Sbjct: 402 GNEKV-------IVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVG 453
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 137/323 (42%), Gaps = 33/323 (10%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF---IP 113
+E L+E+LD ++ G ++ +G ++ G G LG D IP
Sbjct: 146 LEPDKSKLLENLDPS-DIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIP 204
Query: 114 QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-----IQKTPLKL 168
Q + + V I G H++AL +G VY+WG G G G G + T +
Sbjct: 205 QLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGC-----GDRGQLGHGNTLGYLDPTLIDE 259
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
+ KIA GA H + + S G + + G G LG ++ L P ++
Sbjct: 260 LKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGH----------GNNLAQLLPKKI 309
Query: 229 -PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L KHI V G T + + ++GL +LG ++ P I++
Sbjct: 310 MSLNGKHIMAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEM------PSYYMPTKIEA 363
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP-SLQDKTI 346
L K T +A G S A+++ GK++A+G D RLGL N + + +P I L+ K I
Sbjct: 364 LFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGN-EKVIVKPREIQGDLKGKKI 422
Query: 347 TSIACGNCVSFAIDSEGVLYGWG 369
+ + AID G +Y WG
Sbjct: 423 KRVVASLFHALAIDENGQVYIWG 445
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------- 384
EP L++ + IACG F + G ++ G G+ LG G DD+
Sbjct: 147 EPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQL 206
Query: 385 -------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
L +EGK+Y++G D G+LG N + +PT I L+ K +
Sbjct: 207 LPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGN-TLGYLDPTLIDELKSKEV 265
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
T IACG S A+ S+G ++ WG G+ LG+G L P KI LN ++ VA G
Sbjct: 266 TKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKI--MSLNGKHIMAVACG 323
Query: 486 GQHSVILA 493
+++ +A
Sbjct: 324 ECYTIAVA 331
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 46/301 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD GQLG G + + L+++L + V ++ G MH++ + DGK++
Sbjct: 227 TAEGKVYSWGCGDRGQLGHG-NTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIF 285
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG GALG ++ +P+ + K + ++ G+ +++A+ D V++WG
Sbjct: 286 SWGDGSNGALG-HGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGL--- 340
Query: 150 SHGSMGLKGEGIQK----TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G G G G++ P K+E++ GI +A G +++ G + G ++ +
Sbjct: 341 --GGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFR 398
Query: 204 LGRITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNN 260
LG ++ ++P E+ LK K I V +++ I G + +G
Sbjct: 399 LGLGNEK----------VIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQE 448
Query: 261 YSQLGEADSEVQK--------SGNTCFFTP-------HLIKSLSDKKFTMLASGQHHSLA 305
+G + Q+ + + FFT H+ + K++ + + +L
Sbjct: 449 IGPVGNDEDAKQQQCMLSYAATASVIFFTRDDKEKHYHVAVRIPSKRYLLYSLSDASALR 508
Query: 306 L 306
L
Sbjct: 509 L 509
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 214/474 (45%), Gaps = 54/474 (11%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V++ G GQLG+ ++ E ++E L +V G H +C++ G VY+WG
Sbjct: 3 VISVGNNKNGQLGI-ENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRG 61
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS- 153
EG LG + P + L ++ V+++ G+ HS+AL + G VY WG S
Sbjct: 62 KEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSK 121
Query: 154 MGLKG-EGIQKTP----LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
GL+ G+ + P K +S+ I + ++ T+G + +
Sbjct: 122 TGLEATNGLLEMPGMSKPKYQSI-----IENSVSQYLNGEKEIYDSTSGNNDDDDEASTS 176
Query: 209 QRSASRNARRGMSFLE--PGEVP--LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQ 263
++S ++ + + + + P +V L + + D+ G ++ ++ G I +G N Q
Sbjct: 177 EQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQ 236
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S P L+K+L D K ++ G+ H A+ +G +Y +G +G+L
Sbjct: 237 LGLKHRWFNSS-------PQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQL 289
Query: 324 GLKNVSEPVTEPTPIP--SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
G NV + P + SL ++ ++CG+ + + +LY +G G QLG +E
Sbjct: 290 GHSNV-KSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEE 348
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
L+ +G ++ + P + +L+DK I + CG+ + A+ +
Sbjct: 349 TQHLD---------------MGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTED 393
Query: 442 GVLYGWGMGNGYQLG-NGKEDDILEPM--KIEGKQLNNYTVLQVASGGQHSVIL 492
+Y WG G+ LG N K ++ + I G++++ +++G +HS+I+
Sbjct: 394 NEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEISC-----ISAGEKHSLIV 442
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 58/318 (18%)
Query: 223 LEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
LEP + LK K I +G +N +S G + ++G QLG + + +
Sbjct: 23 LEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFST------ 76
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRLGLKNVSEPVTEPTP 337
P+LIK+L ++ +A G HSLAL +G++Y +G + D + GL E
Sbjct: 77 KPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGL----EATNGLLE 132
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG----------------------YQ 375
+P + SI N VS ++ E +Y GN Y
Sbjct: 133 MPGMSKPKYQSI-IENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYN 191
Query: 376 ----------LGNGKEDDI---------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
L N + DI + GKI+ +G ++ G+LGLK+ + P
Sbjct: 192 QTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKH-RWFNSSPQL 250
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
+ +L D I S++CG A+ +G LY WG+G QLG+ L P K+ LN
Sbjct: 251 VKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNG 310
Query: 477 YTVLQVASGGQHSVILAK 494
V QV+ G +++L +
Sbjct: 311 IQVSQVSCGSNFTMVLGR 328
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 48/276 (17%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
S+++ G N QLG + + P +++SL K +SG+ H++ ++ G
Sbjct: 2 SVISVGNNKNGQLGIENIKEH-------LEPKVLESLKGKVIVSCSSGEAHNICVSRFGD 54
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM- 370
+Y++GR G+LG+ T+P I +L + + +ACGN S A+ +G +Y WG
Sbjct: 55 VYSWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQL 114
Query: 371 ------GNGYQLGNG----------KEDDI--------LNSEGKIY-------------A 393
G + NG K I LN E +IY +
Sbjct: 115 HKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEAS 174
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPS-LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
G+ K + T P + L ++ + I+ G S A+ G ++ WG
Sbjct: 175 TSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEK 234
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
QLG P + K L + ++ V+ G QH
Sbjct: 235 GQLGLKHRWFNSSPQLV--KTLLDVKIVSVSCGRQH 268
>gi|337746644|ref|YP_004640806.1| BNR repeat-containing protein [Paenibacillus mucilaginosus KNP414]
gi|336297833|gb|AEI40936.1| BNR repeat domain protein [Paenibacillus mucilaginosus KNP414]
Length = 691
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-EFIPQTVNLPKKAV 123
V+DL+ VV V GG H++ L DG V+ WG N+ G LG + S P V V
Sbjct: 82 VKDLEEVVTVAAGGNHSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLSSVV 141
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-------TPLKLESVSGIVK 176
ISA SH++AL DGTV+AWG + G G G TP +++ + ++
Sbjct: 142 AISANFSHNLALKSDGTVWAWG-----MNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIA 196
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A+G + L S G L G G +G T S S P++ + +
Sbjct: 197 VAAGPGTSLALKSDGTLWAWG----GLVGDGTTESRS--------------TPVQAQGLS 238
Query: 237 DVFT---GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
V + G + S G++ A+G N Y QLG+ + T +TP ++ LS
Sbjct: 239 SVVSFDAGDSRFVVKSDGTVWAWGWNGYGQLGDGTT-------TTRYTPVPLQELS--SV 289
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
A+ + HSLAL S+G ++ +G + G + E TP+ + IA G
Sbjct: 290 AAFAADEWHSLALKSDGTVWEWGCNSKGEM----CYESDIRTTPVQVQDLSSAVDIAAGF 345
Query: 354 CVSFAIDSEGVLYGWGMGNGY-QLGN 378
S A+ S+G ++ WG NGY Q+G+
Sbjct: 346 EHSLAVKSDGTVWAWG-NNGYGQMGD 370
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 41/297 (13%)
Query: 37 GVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V GQ + G LG P R T V+ L +VV + H + L DG V+ WG
Sbjct: 105 GTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLSSVVAISANFSHNLALKSDGTVWAWGM 164
Query: 96 NDEGALGREAEGD---SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N+ G LG D S + P V + ++AG S+AL DGT++AWG
Sbjct: 165 NNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPGTSLALKSDGTLWAWG------- 217
Query: 153 SMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
GL G+G + TP++ + +S +V +G FV+ S G + G GQLG
Sbjct: 218 --GLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVV-KSDGTVWAWGWNGYGQLG---- 270
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTG--VYNTFISSKGSILAFGLNNYSQLGEA 267
G + VPL+ F ++ + S G++ +G N+ ++
Sbjct: 271 --------DGTTTTRYTPVPLQELSSVAAFAADEWHSLALKSDGTVWEWGCNSKGEMCY- 321
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+S+++ TP ++ LS +A+G HSLA+ S+G ++A+G + YG++G
Sbjct: 322 ESDIRT-------TPVQVQDLSSA--VDIAAGFEHSLAVKSDGTVWAWGNNGYGQMG 369
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
TP +K L ++ +A+G +HSLAL S+G ++A+G+++YG LG ++ + TP+
Sbjct: 78 TPVQVKDL--EEVVTVAAGGNHSLALKSDGTVWAWGQNEYGVLG-EDPYKTSWRLTPVQV 134
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---------------- 384
++ +I+ + A+ S+G ++ WGM N QLGNG D+
Sbjct: 135 QGLSSVVAISANFSHNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSV 194
Query: 385 ------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L S+G ++A+G GL + TP+ + ++ S G+
Sbjct: 195 IAVAAGPGTSLALKSDGTLWAWG-------GLVGDGTTESRSTPVQAQGLSSVVSFDAGD 247
Query: 433 CVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIE 470
F + S+G ++ WG NGY QLG+G P+ ++
Sbjct: 248 S-RFVVKSDGTVWAWGW-NGYGQLGDGTTTTRYTPVPLQ 284
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G++ D+ R T V+DL + V++ G H++ + DG V+ WG N
Sbjct: 306 GTVWEWGCNSKGEMCYESDI--RTTPVQVQDLSSAVDIAAGFEHSLAVKSDGTVWAWGNN 363
Query: 97 DEGALGREAE 106
G +G A
Sbjct: 364 GYGQMGDAAR 373
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 30/345 (8%)
Query: 43 GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
G G+LGLG ++ + E ++N+ V G HT+ +TEDG++Y G ND
Sbjct: 24 GNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDF 83
Query: 99 GALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G LG + + IP +L +V + G++HS+AL E G +Y WGS DS G +GL+
Sbjct: 84 GQLGHDGCRTKLQKIPGVESLVMTSV--ACGEAHSMALNEWGQLYTWGS--DSCGQLGLE 139
Query: 158 -GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
EGIQ P +++++ +V+I+ G H + LT+ G L T G E G++
Sbjct: 140 TDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNE---FGQLGLGLGPG 196
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQK 273
N + +P I + G Y++F+ SK G++ +G N++ QLG
Sbjct: 197 NVSKPTLVNSLVGLP-----ISFIACGGYHSFVVSKSGAVFGWGKNDFGQLG-------I 244
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
+ T +P +K++ K +A G+ S+ L +G ++ G YG+LG + S +
Sbjct: 245 NSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIV 304
Query: 334 EPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLG 377
P + L T+T + CG + + S+G +Y +G+G+ QLG
Sbjct: 305 -PRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLG 348
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 54/363 (14%)
Query: 140 TVYAWGSFRDSHGSMGLKG--EGIQKTP---LKLESVSGIVKIASGADHFVMLTSRGNLL 194
T+Y WG+ +G +GL G E +P + ESV+ I +A G +H + +T G L
Sbjct: 19 TMYCWGN--TINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLY 76
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
G + GQLG R+ + G+ L V H + ++ G +
Sbjct: 77 ACGSNDFGQLGHDGCRTKLQKIP-GVESLVMTSVACGEAH---------SMALNEWGQLY 126
Query: 255 AFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G ++ QLG E D +Q + P ++K+L+ ++ G H +AL + G++Y
Sbjct: 127 TWGSDSCGQLGLETDEGIQ-------YKPKIVKTLASMLLVQISCGYKHCMALTNHGELY 179
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G +++G+LGL V++PT + SL I+ IACG SF + G ++GW
Sbjct: 180 TWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGW----- 234
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
G++D+G+LG+ N ++ P + +++ + IA G
Sbjct: 235 ---------------------GKNDFGQLGI-NSQTSLSSPAQLKTIRTVKVKYIAGGED 272
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
S + +G ++ G G QLG+G + + P K+ +L TV QV G +H++ L
Sbjct: 273 FSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKV--LELMGSTVTQVTCGRRHTLTLV 330
Query: 494 KPK 496
K
Sbjct: 331 PSK 333
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 139/320 (43%), Gaps = 33/320 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G + CG D GQLG + + VE L + V G H++ L E G++YTW
Sbjct: 70 TEDGQLYACGSNDFGQLGHDGCRTKLQKIPGVESLV-MTSVACGEAHSMALNEWGQLYTW 128
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G + G LG E + ++ P+ V VQIS G H +AL G +Y WGS
Sbjct: 129 GSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQ 188
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL + K P + S+ G I IA G H +++ G + G + GQLG +Q
Sbjct: 189 LGLGLGPGNVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQ 247
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHI---DDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
S S A+ +K K+I +D ++ F++ G + G Y QLG
Sbjct: 248 TSLSSPAQLKTI------RTVKVKYIAGGED-----FSVFLTYDGGVFTCGAGMYGQLGH 296
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGL 325
+ P + L T + G+ H+L L S+G++Y+FG G+LG
Sbjct: 297 GSFSNE-------IVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGT 349
Query: 326 K-----NVSEPVTEPTPIPS 340
K N + V P PS
Sbjct: 350 KSSINSNTPQLVLGPWLSPS 369
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 129/244 (52%), Gaps = 40/244 (16%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P L+ SL D K +A+ G+H+ LAL+S+G +Y++G D GRLG ++ EP +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHY-LALSSDGCVYSWGSGDGGRLGHGDIRR---EPELV 557
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------- 385
L +K IT IACG+ S A+ S G LY WG G+ +LG+G +D L
Sbjct: 558 KELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHV 617
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ--DKTITSI 428
+ +G ++++G DYG+LG + S+ P + +L+ +K I ++
Sbjct: 618 VDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLG-RGGSDCCKVPKVVETLKHHNKYIVNV 676
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG+ S A+ +G ++ WG +GY+LG+G D + P +EG L NY ++ +A G H
Sbjct: 677 LCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEG--LINYHIVDIAVGPSH 734
Query: 489 SVIL 492
+ L
Sbjct: 735 CLAL 738
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 63/391 (16%)
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
D V+ WG D G KG + K+P ++++++ + V IA G+ ++T G +
Sbjct: 2868 DSRVFVWG-LNDKGQLGGCKGSKV-KSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYV 2925
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
+G N R G+ E +P++ ++ F G ++ I
Sbjct: 2926 SG--------------EGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCI 2971
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ +G + ++G +LG D T +P LI++L K +A G HS A+
Sbjct: 2972 TREGKVFSWGEGIDGKLGHGDV-------TSRLSPTLIEALESKLIVEIACGSSHSAAVT 3024
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
++G++Y +G DYGRLG + S+ + P + +LQD + IACG + + A+ +
Sbjct: 3025 ADGELYTWGLGDYGRLGHGD-SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCV 3083
Query: 366 YGWGMGNGYQLGNG---------KEDDI-----------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G K D + L++ GK++ +G+ DY
Sbjct: 3084 WSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDY 3143
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG N S + L+ K IT IA G A+ G +Y WG + Q GNG
Sbjct: 3144 YRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGN 3203
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
P G +L+ + +A G HS+
Sbjct: 3204 TTVNKRPQICLG-ELDGVKISHIACGSSHSI 3233
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 178/418 (42%), Gaps = 58/418 (13%)
Query: 89 KVYTWGCNDEGALG--REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
K Y WG N G LG + + S I + + ++ G+ L +G VYA G
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDII-AALRPTAVAGGEQTLFILTSEGKVYASGL 3829
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQG 202
+G + TP+ +E + + + + SG H ++LTS + + G E G
Sbjct: 3830 GGSGRLGIGRSDNIV--TPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDG 3887
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNY 261
+LG + +S R+ + L K I + G ++ I+SKG + +G Y
Sbjct: 3888 KLGH-GDKLSSETPRKIEALLG--------KQIVHISCGSSHSAAITSKGELYTWGKGRY 3938
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG D G+ C P L+++L K +A SG +LA+ + ++++G D
Sbjct: 3939 GRLGHGD------GDDC-LKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGD 3991
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ +P I SL + + CG+ S A+ G LY WG G+ Y+LG+G
Sbjct: 3992 YGKLG-RGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHG 4050
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
D V P + LQ K I ++A G+ A
Sbjct: 4051 TNDH---------------------------VRRPRKVACLQGKQIVTVAAGSLHCVACT 4083
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
G ++ WG + QLGNG + I EP + L N + +V G HS + P
Sbjct: 4084 DAGEVFTWGDNDEGQLGNGTLNPIPEPTLV--TVLENVKLNRVGCGSAHSFAWSTEAP 4139
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 144/289 (49%), Gaps = 39/289 (13%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGK 89
C T G V + G+G G+LG G DV R + L+E L++ +VE+ G H+ +T DG+
Sbjct: 2970 CITREGKVFSWGEGIDGKLGHG-DVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGE 3028
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--------KAVQISAG--DSHSVALLEDG 139
+YTWG D G LG GDS +T+++PK K + I+ G D+ ++AL ++
Sbjct: 3029 LYTWGLGDYGRLG---HGDS----KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNN 3081
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG G +G G P K++++ G + +IA GA + L++ G + T G
Sbjct: 3082 CVWSWGD--GDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWG 3139
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+ +LG + + R +E PLK+K I ++ G + ++ G + ++
Sbjct: 3140 KGDYYRLGH-----GNDSHYRSPQLIEG---PLKKKRITEIAVGALHCLAVTDTGEVYSW 3191
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
G N++ Q G ++ V K C + L K + +A G HS+A
Sbjct: 3192 GDNDHGQQGNGNTTVNKRPQIC------LGELDGVKISHIACGSSHSIA 3234
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 160/359 (44%), Gaps = 45/359 (12%)
Query: 39 VLTCGQGDTGQLG--LGPDV---MERKTFALVEDLDNVVEVVVGGMHTV-CLTEDGKVYT 92
V G D GQLG G V E K A + + + GG TV +T DGKVY
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS-----IAGGSKTVFIVTYDGKVYV 2925
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPK------KAVQISAGDSHSVALLEDGTVYAWGS 146
G EGA GR G++E I V L K V + G HS+ + +G V++WG
Sbjct: 2926 SG---EGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G + +P +E++ IV+IA G+ H +T+ G L T G + G+L
Sbjct: 2983 GID--GKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRL 3040
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FISSKGSILAFGLNN 260
G ++ P +V L+ + D+ G + ++ + ++G +
Sbjct: 3041 GHGDSKTLHI----------PKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGD 3090
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+ +LG SE C P I +L + +A G SLAL++ GK++ +G+ DY
Sbjct: 3091 FGKLGRGGSE------GCNI-PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDY 3143
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
RLG N S + L+ K IT IA G A+ G +Y WG + Q GNG
Sbjct: 3144 YRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG 3202
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 169/386 (43%), Gaps = 54/386 (13%)
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWG 145
D +V+ WG ND+G LG + + N+ + V I+ G + DG VY G
Sbjct: 2868 DSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
++G +GL P++L++++ V + G H + +T G + + G
Sbjct: 2928 --EGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG +R + +E L+ K I ++ G ++ +++ G + +GL +
Sbjct: 2986 GKLGH-----GDVTSRLSPTLIEA----LESKLIVEIACGSSHSAAVTADGELYTWGLGD 3036
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG DS+ P +K+L D K +A G +LAL ++++G
Sbjct: 3037 YGRLGHGDSKT-------LHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDG 3089
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I +L + + IACG S A+ + G ++ WG G+ Y+LG+
Sbjct: 3090 DFGKLG-RGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGH 3148
Query: 379 GKEDDI---------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G + + G++Y++G +D+G+ G N +
Sbjct: 3149 GNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNK 3208
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFA 437
+ L I+ IACG+ S A
Sbjct: 3209 RPQICLGELDGVKISHIACGSSHSIA 3234
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 46/344 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV-------VEVVVGGMHTVCLTE 86
T G V G+G G+LGLG + ++ LD + V V GG H++C+T
Sbjct: 2918 TYDGKVYVSGEGANGRLGLG----NTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITR 2973
Query: 87 DGKVYTWGCNDEGALGREAEGD--SEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVY 142
+GKV++WG EG G+ GD S P + K V+I+ G SHS A+ DG +Y
Sbjct: 2974 EGKVFSWG---EGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELY 3030
Query: 143 AWGSFRDSHGSMGLKGEGIQKT---PLKLESVSG--IVKIASGAD--HFVMLTSRGNLLT 195
WG G G G G KT P +++++ ++ IA G+ + LT + +
Sbjct: 3031 TWGL-----GDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWS 3085
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G + G+LGR G + + + R ++ +S+ G +
Sbjct: 3086 WGDGDFGKLGR--------GGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWT 3137
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G +Y +LG + ++ + +P LI+ L K+ T +A G H LA+ G++Y+
Sbjct: 3138 WGKGDYYRLGHGN-------DSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYS 3190
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G +D+G+ G N + + L I+ IACG+ S A
Sbjct: 3191 WGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIA 3234
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 37/254 (14%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
TG+ NT I S+ + +GLN+ QLG KS P +K+++ + +A G
Sbjct: 2860 TGIDNTDIDSR--VFVWGLNDKGQLGGCKGSKVKS-------PTEMKNIAALRPVSIAGG 2910
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+ +GK+Y G GRLGL N +E ++ P + +L + +
Sbjct: 2911 SKTVFIVTYDGKVYVSGEGANGRLGLGN-TENISIPVQLDTLNMHFVKKVTVH------- 2962
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
G+ + EGK++++G G+LG +V+ ++ PT I +
Sbjct: 2963 -----------------PGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLS-PTLIEA 3004
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
L+ K I IACG+ S A+ ++G LY WG+G+ +LG+G + P ++ K L +Y V
Sbjct: 3005 LESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQV--KALQDYKV 3062
Query: 480 LQVASGGQHSVILA 493
+ +A G + + LA
Sbjct: 3063 IDIACGSRDAQTLA 3076
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 27/294 (9%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVA 134
GG H + LT + +V++WG ++G LG + SE P+ + L K+ V IS G SHS A
Sbjct: 3865 GGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSE-TPRKIEALLGKQIVHISCGSSHSAA 3923
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSG--IVKIA--SGADHFVMLTS 189
+ G +Y WG R +G +G G+G P LE++ ++ +A SG + +T
Sbjct: 3924 ITSKGELYTWGKGR--YGRLG-HGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITD 3980
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
+ + G + G+LG R S ++ + + + + F+ ++
Sbjct: 3981 DDCVWSWGDGDYGKLG----RGGSDGCKKPLRIESLIGMAVCKVECGSQFS----VALTK 4032
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + +G +Y +LG ++ + P + L K+ +A+G H +A
Sbjct: 4033 NGDLYTWGKGDYYRLGHGTNDHVRR-------PRKVACLQGKQIVTVAAGSLHCVACTDA 4085
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
G+++ +G +D G+LG P+ EPT + L++ + + CG+ SFA +E
Sbjct: 4086 GEVFTWGDNDEGQLG-NGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEA 4138
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 170/411 (41%), Gaps = 68/411 (16%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G G+ LG + K + V +L + +++ + + LT +G+VY+ L
Sbjct: 444 GWGNINWLGGESNDGSLKIYETVAEL-GIKQIMCSSDNIIALTNNGRVYS--------LA 494
Query: 103 REAEGDSE-FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG- 160
A ++ + +++ K + + H +AL DG VY+WGS G G G G
Sbjct: 495 YNARCEAPVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGS-----GDGGRLGHGD 549
Query: 161 IQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
I++ P ++ + I +IA G+ + +TS G L T G G+LG + R
Sbjct: 550 IRREPELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGH------GNSEDR 603
Query: 219 GMSFLEPGEVPLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+ L G L H+ DV G + I G + ++G +Y +LG + G
Sbjct: 604 LLPTLVAG---LSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLG-------RGG 653
Query: 276 NTCFFTPHLIKSLS--DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
+ C P ++++L +K + G S+AL +G ++ +G+ D RLG + + V
Sbjct: 654 SDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTL-DHVR 712
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P + L + I IA G A+ ++ WG S+ + YA
Sbjct: 713 YPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG-----------------SDVQKYA 755
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+Y EPT I ++ + I +ACG +F S G L
Sbjct: 756 LSSDNYN-----------MEPTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 104/253 (41%), Gaps = 39/253 (15%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ S +G N+ QLG KS P + ++ + T +A G+
Sbjct: 3762 WSLLWGSNHKFYVWGHNHRGQLGGVQGTKVKS-------PVINDIIAALRPTAVAGGEQT 3814
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI--TSIACGNCVSFAID 360
L SEGK+YA S+ + P I LQ I S+ G + +
Sbjct: 3815 LFILTSEGKVYA-SGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLT 3873
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
S ++ WG G +LG+G D L+SE P I +L
Sbjct: 3874 SNFEVFSWGDGEDGKLGHG---DKLSSE------------------------TPRKIEAL 3906
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
K I I+CG+ S AI S+G LY WG G +LG+G DD L+P +E L +Y V+
Sbjct: 3907 LGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEA--LKSYKVI 3964
Query: 481 QVASGGQHSVILA 493
VA G + LA
Sbjct: 3965 DVACGSGDAQTLA 3977
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L+S+G +Y++G D GRLG ++ EP + L +K IT IACG+ S A+ S G L
Sbjct: 528 LSSDGCVYSWGSGDGGRLGHGDIRR---EPELVKELVNKKITQIACGSTYSAAVTSNGEL 584
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Y WG G+ +LG+G +D L P + G ++ + SG H++ + K
Sbjct: 585 YTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDK 634
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
+ G V + G GD G+LG G D+ R+ LV++L N + ++ G ++ +T +G++Y
Sbjct: 529 SSDGCVYSWGSGDGGRLGHG-DI--RREPELVKELVNKKITQIACGSTYSAAVTSNGELY 585
Query: 92 TWGCNDEGALGREAEGDSE--FIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWG 145
TWG G+ GR G+SE +P V + V +GD+H++A+ +DG V++WG
Sbjct: 586 TWG---RGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWG 642
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG----IVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+G +G G K P +E++ IV + G+ V L G + T G +
Sbjct: 643 D--GDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDG 700
Query: 202 GQLG 205
+LG
Sbjct: 701 YRLG 704
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G G+LG G + +R LV L +VV+V G HT+ + +DG
Sbjct: 579 TSNGELYTWGRGSYGRLGHG-NSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGI 637
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKK----AVQISAGDSHSVALLEDGTVYAWG 145
V++WG D G LGR D +P+ V K V + G SVAL +DGTV+ WG
Sbjct: 638 VWSWGDGDYGKLGR-GGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWG 696
Query: 146 S---FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
+R HG++ + P +E + IV IA G H + LT + T G
Sbjct: 697 KSDGYRLGHGTLDH-----VRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSDV 751
Query: 201 Q 201
Q
Sbjct: 752 Q 752
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G+V + G GD G+LG G P V+E L +V V+ G +V L +DG
Sbjct: 636 GIVWSWGDGDYGKLGRGGSDCCKVPKVVE----TLKHHNKYIVNVLCGSQFSVALGKDGT 691
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
V+TWG +D LG D P+ V + V I+ G SH +AL ++ ++ WGS
Sbjct: 692 VWTWGKSDGYRLG-HGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSD 750
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
+ L + P + +++ I +A G + TS G L
Sbjct: 751 VQKY---ALSSDNYNMEPTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G + T G+GD +LG G D + R +V V G +H V T+ G+V+T
Sbjct: 4031 TKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFT 4090
Query: 93 WGCNDEGALGREAEGDSEFIPQ----TVNLPKKAVQISAGDSHSVA 134
WG NDEG LG G IP+ TV K ++ G +HS A
Sbjct: 4091 WGDNDEGQLG---NGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFA 4133
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 380 KEDDILNSEGK------------IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+ DD L +E K ++ +G +D G+LG S+ V PT + ++ S
Sbjct: 2848 RSDDTLRNENKGTGIDNTDIDSRVFVWGLNDKGQLGGCKGSK-VKSPTEMKNIAALRPVS 2906
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
IA G+ F + +G +Y G G +LG G ++I P++++ ++ + V GG+
Sbjct: 2907 IAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGR 2966
Query: 488 HSVILAK 494
HS+ + +
Sbjct: 2967 HSLCITR 2973
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 32/336 (9%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
TL T GVVLTCG +GQ G G +M R AL + G H + L
Sbjct: 372 TLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIAL 431
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLED-GTVY 142
T+ G Y+WG ND G LG E +P+ + +L K + ++ H A++ D G +Y
Sbjct: 432 TDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELY 491
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
+G + G +GL Q TP ++S+ + +A G H ++ T+ G L T G +
Sbjct: 492 TFG--MNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKND 549
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLN 259
GQLG R P V L + + V G Y++ +S+ G +FG N
Sbjct: 550 YGQLGLAHNRQIKL----------PTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRN 599
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+Y QLG S+V ++ P+++ S+ + G +H++ L+ +G++Y FGR++
Sbjct: 600 DYGQLG-IGSKVHQN------VPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNN 652
Query: 320 YGRLGLKNVSEPVTEPTPI---PSLQDKTITSIACG 352
G+LG + ++ + P P+ P + +A G
Sbjct: 653 KGQLGNRGSADALL-PVPLKVRPEKNSRRCVDVAAG 687
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 173/369 (46%), Gaps = 39/369 (10%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNVVEVVVGGMHTVCLTEDG 88
KC+ G + +CGQ G+LG G D+ ER V D++ +VV G LT +G
Sbjct: 323 KCEASGEL-YSCGQNSYGELGTGDDI-ERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEG 380
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAW 144
V T G N G G+ + + + V + K + S G H +AL + G Y+W
Sbjct: 381 VVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSW 440
Query: 145 GSFRDSHGSMGLKGEGIQ-KTPLKLESVS----GIVKIASGADHFVMLTSRGNLLTAGCP 199
G + G +G + + P +ES+ G ++ H ++T G L T G
Sbjct: 441 G--YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSY--HHSAVITDAGELYTFGMN 496
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGL 258
+ GQLG + ++ + + LE EV + V G+Y+T I ++ G + G
Sbjct: 497 DCGQLG--LDHTQHQSTPQLVKSLEATEVSM-------VACGLYHTIICTAAGELFTCGK 547
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N+Y QLG A + K P L+ +L ++ + +A G +HS+ +++ G+ ++FGR+
Sbjct: 548 NDYGQLGLAHNRQIK-------LPTLV-ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRN 599
Query: 319 DYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
DYG+LG+ V + V P + + + CG + + +G +Y +G N QLG
Sbjct: 600 DYGQLGIGSKVHQNV--PNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLG 657
Query: 378 N-GKEDDIL 385
N G D +L
Sbjct: 658 NRGSADALL 666
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 66/422 (15%)
Query: 119 PKKAVQISAGDSHSVALLED---------GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
P AV + + AL E G +Y+ G ++S+G +G G+ I++ L
Sbjct: 299 PTSAVNLEMSIAKLAALKEQPMYGKCEASGELYSCG--QNSYGELG-TGDDIERHQLTSV 355
Query: 170 SVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
S+ G I ++ SG + +LT+ G +LT G + GQ G+ R M L P
Sbjct: 356 SLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQ------GHFDERVM-MLRPV 408
Query: 227 EVPLKRKHIDDVFTGVYN-----TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
+ L+ + + F N ++ G ++G N+ QLG ++ T
Sbjct: 409 QA-LRSQRVK--FIAASNGCEHMIALTDTGLAYSWGYNDRGQLG------HENLATKIHV 459
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
P LI+SL DKK + HHS + G++Y FG +D G+LGL + T P + SL
Sbjct: 460 PKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQST-PQLVKSL 518
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------- 384
+ ++ +ACG + + G L+ G + QLG I
Sbjct: 519 EATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVA 578
Query: 385 --------LNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
+++ G+ ++FGR+DYG+LG+ V + V P + + + CG +
Sbjct: 579 CGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNV--PNVVALSSNTRMVRATCGCYHT 636
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK-QLNNYTVLQVASGGQHSVILAK 494
+ +G +Y +G N QLGN D L P+ ++ + + N+ + VA+G + ++ +
Sbjct: 637 VLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVE 696
Query: 495 PK 496
K
Sbjct: 697 RK 698
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 30/345 (8%)
Query: 43 GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
G G+LGLG ++ + E ++N+ V G HT+ +TEDG++Y G ND
Sbjct: 5 GNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDF 64
Query: 99 GALGRE-AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
G LG + + IP +L +V + G++HS+AL E G +Y WGS DS G +GL+
Sbjct: 65 GQLGHDGCRTKLQKIPGVESLVMTSV--ACGEAHSMALNEWGQLYTWGS--DSCGQLGLE 120
Query: 158 -GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
EGIQ P +++++ +V+I+ G H + LT+ G L T G E G++
Sbjct: 121 TDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNE---FGQLGLGLGPG 177
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQK 273
N + +P I + G Y++F+ SK G++ +G N++ QLG
Sbjct: 178 NVSKPTLVNSLVGLP-----ISFIACGGYHSFVVSKSGAVFGWGKNDFGQLG-------I 225
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
+ T +P +K++ K +A G+ S+ L +G ++ G YG+LG + S +
Sbjct: 226 NSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIV 285
Query: 334 EPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLG 377
P + L T+T + CG + + S+G +Y +G+G+ QLG
Sbjct: 286 -PRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLG 329
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 165/362 (45%), Gaps = 54/362 (14%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTP---LKLESVSGIVKIASGADHFVMLTSRGNLLT 195
+Y WG+ +G +GL G E +P + ESV+ I +A G +H + +T G L
Sbjct: 1 MYCWGN--TINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYA 58
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G + GQLG R+ + G+ L V H + ++ G +
Sbjct: 59 CGSNDFGQLGHDGCRTKLQKIP-GVESLVMTSVACGEAH---------SMALNEWGQLYT 108
Query: 256 FGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
+G ++ QLG E D +Q + P ++K+L+ ++ G H +AL + G++Y
Sbjct: 109 WGSDSCGQLGLETDEGIQ-------YKPKIVKTLASMLLVQISCGYKHCMALTNHGELYT 161
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G +++G+LGL V++PT + SL I+ IACG SF + G ++GW
Sbjct: 162 WGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGW------ 215
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
G++D+G+LG+ N ++ P + +++ + IA G
Sbjct: 216 --------------------GKNDFGQLGI-NSQTSLSSPAQLKTIRTVKVKYIAGGEDF 254
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
S + +G ++ G G QLG+G + + P K+ +L TV QV G +H++ L
Sbjct: 255 SVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKV--LELMGSTVTQVTCGRRHTLTLVP 312
Query: 495 PK 496
K
Sbjct: 313 SK 314
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 139/320 (43%), Gaps = 33/320 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G + CG D GQLG + + VE L + V G H++ L E G++YTW
Sbjct: 51 TEDGQLYACGSNDFGQLGHDGCRTKLQKIPGVESL-VMTSVACGEAHSMALNEWGQLYTW 109
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G + G LG E + ++ P+ V VQIS G H +AL G +Y WGS
Sbjct: 110 GSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQ 169
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL + K P + S+ G I IA G H +++ G + G + GQLG +Q
Sbjct: 170 LGLGLGPGNVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQ 228
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHI---DDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
S S A+ +K K+I +D ++ F++ G + G Y QLG
Sbjct: 229 TSLSSPAQLKTI------RTVKVKYIAGGED-----FSVFLTYDGGVFTCGAGMYGQLGH 277
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGL 325
+ P + L T + G+ H+L L S+G++Y+FG G+LG
Sbjct: 278 GSFSNE-------IVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGT 330
Query: 326 K-----NVSEPVTEPTPIPS 340
K N + V P PS
Sbjct: 331 KSSINSNTPQLVLGPWLSPS 350
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 179/401 (44%), Gaps = 72/401 (17%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + ++A G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSIL 254
G + QLG + P +P L+ I + G ++ +S G +L
Sbjct: 65 GSNDYSQLGH------------DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVL 112
Query: 255 AFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N+ QLG A + E+ + P +++ L K +A G +HSLAL S G++Y
Sbjct: 113 SWGDNDCGQLGHATEKEIVQ-------LPKVVRQLVSKTVVQIACGNNHSLALTSCGELY 165
Query: 314 AFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++G + YG+LG+ + ++ P + +L + +IACG SF I G ++GWG
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 372 NGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLK 405
N QLG E + L +EG ++ G YG+LG
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG-H 284
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDIL 464
S P + L TIT +ACGN + A + S G +Y +G+G+ QLG ++
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLM 344
Query: 465 EPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
P + G ++ + + Q+ SGG S++
Sbjct: 345 LPQVVIGPWVSPSGSAQLQSNDSQVSLVIRQIFSGGDQSIV 385
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 143/305 (46%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P + V G +T F+++ G + A G N+YSQLG D ++
Sbjct: 29 LTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH-DLPTKR------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D ++ G HSLAL+ G++ ++G +D G+LG E V P +
Sbjct: 81 -PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG +D
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP 199
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + PT + +L+ + +ACG
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY-PTQLKTLRTLGVRFVACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 316
Query: 492 LAKPK 496
L +
Sbjct: 317 LVPSR 321
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 156/340 (45%), Gaps = 49/340 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q P Q + AV + C T G V CG D QLG + K
Sbjct: 26 EQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHD---LPTKRPQ 82
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LP 119
L+ +L + ++++ G H++ L++ G+V +WG ND G LG E + +P+ V +
Sbjct: 83 LIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVS 142
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGI-- 174
K VQI+ G++HS+AL G +Y+WGS + +G +G+ PL+L ++ GI
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPL 200
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEV 228
IA G +H +++ G + G GQLG T R+ + G+ F+ G+
Sbjct: 201 AAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGD- 259
Query: 229 PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
++ F++++G + G Y QLG S + P ++ L
Sbjct: 260 -------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMEL 299
Query: 289 SDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
T +A G H+LAL S GK+YAFG G+LG ++
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRS 339
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 160/384 (41%), Gaps = 58/384 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ + D V +V G HT+ LT GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPD-TAVQQVACGHRHTLFLTATGK 60
Query: 90 VYTWGCNDEGALGREAEGDS-EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY G ND LG + + IP+ + +QIS G HS+AL + G V +WG
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPQLIPELQDY--VIIQISCGSRHSLALSDWGQVLSWGD-- 116
Query: 149 DSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G G +K ++L V +V+IA G +H + LTS G L + G G
Sbjct: 117 ---NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG + + + + +PL G ++ IS G++ +G NN
Sbjct: 174 QLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRNNCG 228
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG D E ++ P +K+L +A G S+ L +EG ++ G YG+
Sbjct: 229 QLGLND-ETNRA------YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG S P + L TIT +ACGN + A+
Sbjct: 282 LG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL----------------------- 317
Query: 383 DILNSEGKIYAFGRHDYGRLGLKN 406
+ S GK+YAFG G+LG ++
Sbjct: 318 --VPSRGKVYAFGLGSSGQLGTRS 339
>gi|386723136|ref|YP_006189462.1| BNR repeat-containing protein [Paenibacillus mucilaginosus K02]
gi|384090261|gb|AFH61697.1| BNR repeat domain-containing protein [Paenibacillus mucilaginosus
K02]
Length = 686
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-EFIPQTVNLPKKAV 123
V+DL+ VV V GG H++ L DG V+ WG N+ G LG + S P V V
Sbjct: 77 VKDLEEVVTVAAGGNHSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLSSVV 136
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-------TPLKLESVSGIVK 176
ISA SH++AL DGTV+AWG + G G G TP +++ + ++
Sbjct: 137 AISANFSHNLALKSDGTVWAWG-----MNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIA 191
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A+G + L S G L G G +G T S S P++ + +
Sbjct: 192 VAAGPGTSLALKSDGTLWAWG----GLVGDGTTESRS--------------TPVQAQGLS 233
Query: 237 DVFT---GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
V + G + S G++ A+G N Y QLG+ + T +TP ++ LS
Sbjct: 234 SVVSFDAGDSRFVVKSDGTVWAWGWNGYGQLGDGTT-------TTRYTPVPLQELS--SV 284
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
A+ + HSLAL S+G ++ +G + G + E TP+ + IA G
Sbjct: 285 AAFAADEWHSLALKSDGTVWEWGCNSKGEM----CYESDIRTTPVQVQDLSSAVDIAAGF 340
Query: 354 CVSFAIDSEGVLYGWGMGNGY-QLGN 378
S A+ S+G ++ WG NGY Q+G+
Sbjct: 341 EHSLAVKSDGTVWAWG-NNGYGQMGD 365
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 41/297 (13%)
Query: 37 GVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V GQ + G LG P R T V+ L +VV + H + L DG V+ WG
Sbjct: 100 GTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLSSVVAISANFSHNLALKSDGTVWAWGM 159
Query: 96 NDEGALGREAEGD---SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N+ G LG D S + P V + ++AG S+AL DGT++AWG
Sbjct: 160 NNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPGTSLALKSDGTLWAWG------- 212
Query: 153 SMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
GL G+G + TP++ + +S +V +G FV+ S G + G GQLG
Sbjct: 213 --GLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVV-KSDGTVWAWGWNGYGQLG---- 265
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTG--VYNTFISSKGSILAFGLNNYSQLGEA 267
G + VPL+ F ++ + S G++ +G N+ ++
Sbjct: 266 --------DGTTTTRYTPVPLQELSSVAAFAADEWHSLALKSDGTVWEWGCNSKGEMCY- 316
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+S+++ TP ++ LS +A+G HSLA+ S+G ++A+G + YG++G
Sbjct: 317 ESDIRT-------TPVQVQDLSSA--VDIAAGFEHSLAVKSDGTVWAWGNNGYGQMG 364
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
TP +K L ++ +A+G +HSLAL S+G ++A+G+++YG LG ++ + TP+
Sbjct: 73 TPVQVKDL--EEVVTVAAGGNHSLALKSDGTVWAWGQNEYGVLG-EDPYKTSWRLTPVQV 129
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---------------- 384
++ +I+ + A+ S+G ++ WGM N QLGNG D+
Sbjct: 130 QGLSSVVAISANFSHNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSV 189
Query: 385 ------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L S+G ++A+G GL + TP+ + ++ S G+
Sbjct: 190 IAVAAGPGTSLALKSDGTLWAWG-------GLVGDGTTESRSTPVQAQGLSSVVSFDAGD 242
Query: 433 CVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIE 470
F + S+G ++ WG NGY QLG+G P+ ++
Sbjct: 243 S-RFVVKSDGTVWAWGW-NGYGQLGDGTTTTRYTPVPLQ 279
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G++ D+ R T V+DL + V++ G H++ + DG V+ WG N
Sbjct: 301 GTVWEWGCNSKGEMCYESDI--RTTPVQVQDLSSAVDIAAGFEHSLAVKSDGTVWAWGNN 358
Query: 97 DEGALGREAE 106
G +G A
Sbjct: 359 GYGQMGDAAR 368
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 149/304 (49%), Gaps = 45/304 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCN 96
++ G G+ GQLG+G + E++ +VE L+ +V VV G +++ + +DG ++TWG N
Sbjct: 7 IIAWGSGEDGQLGIGTN-EEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
G LG + E +E IP V K Q + G H +A+ + G YAWG + +G
Sbjct: 66 QRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGG--NEYGQC 123
Query: 155 G---LK---GEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G LK G +++ P + + ++A+G H V+LT G++ T G P G
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG 181
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNY 261
I Q S VP++ + +++V +N + G +LA+G N Y
Sbjct: 182 DIKQIS----------------VPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D++ P ++ L D +A+G HS AL +G++Y +GR ++G
Sbjct: 226 GQLGTGDTQPTSH-------PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 278
Query: 322 RLGL 325
RLGL
Sbjct: 279 RLGL 282
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 136/304 (44%), Gaps = 47/304 (15%)
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
+ + +++ G E GQLG T + LEP + V +G N+
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACV--VEALEP-------YSVRSVVSGSRNSL 51
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I G++ +G N LG K+ N P +K+L++ K T A G H LA
Sbjct: 52 AICDDGTMFTWGWNQRGTLGHQPE--TKTENI----PSRVKALANVKITQAAIGGWHCLA 105
Query: 306 LNSEGKIYAFGRHDYGRLG---LKN-VSEPVTEPTPIPS--LQDKTITSIACGNCVSFAI 359
++ +G+ YA+G ++YG+ G LK+ + PV IP T+ +A G S +
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVL 165
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDI----------------------LNSEGKIYAFGRH 397
EG ++ WG + G+ K+ + L +G++ A+G +
Sbjct: 166 TREGHVWTWG--QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNN 223
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+YG+LG + ++P + P P+ L D T+ IA G S A+ +G +YGWG G +LG
Sbjct: 224 EYGQLGTGD-TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL 282
Query: 458 GKED 461
G D
Sbjct: 283 GDND 286
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 42/193 (21%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
I A+G + G+LG+ +E + +L+ ++ S+ G+ S AI +G ++ WG
Sbjct: 7 IIAWGSGEDGQLGI-GTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
LG+ E N P+ + +L + IT A G
Sbjct: 66 QRGTLGHQPETKTENI--------------------------PSRVKALANVKITQAAIG 99
Query: 432 NCVSFAIDSEGVLYGWGMGNGY----------QLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
A+D +G Y WG GN Y ++G DI+ P + K TV Q
Sbjct: 100 GWHCLAVDDQGRAYAWG-GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPK----LTVRQ 154
Query: 482 VASGGQHSVILAK 494
VA+GG HSV+L +
Sbjct: 155 VAAGGTHSVVLTR 167
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 34/240 (14%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
++++G + QLG D+ +G P ++ + F +A G H+LAL G +
Sbjct: 1 LVSWGCGEFGQLGLKDA----AGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDV 56
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
Y+FG+ +G LG +E + P + SL I IACG+ S A+ EG L+ WG G
Sbjct: 57 YSFGQGTFGALG-HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGK 115
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
YG+LG +V E +P P+ +L D+ +T + CG
Sbjct: 116 --------------------------YGQLGCGSV-ENHLQPVPVTALSDRLLTQVVCGA 148
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ AIDS+G L+ WG G+ Q G+G +D+IL P + L N ++Q ++G +H+V L
Sbjct: 149 DYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLV--CSLENDNIVQASAGARHAVAL 206
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 42/257 (16%)
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKG 251
L++ GC E GQLG + +A FL L + V G +T ++ G
Sbjct: 1 LVSWGCGEFGQLG--LKDAAGVFTSPLPRFLRGSRELLFVR----VACGSSHTLALTGSG 54
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ +FG + LG +E S P ++ SL +A G +HS AL EG+
Sbjct: 55 DVYSFGQGTFGALGHGTTESCSS-------PVIVDSLWGLGIVQIACGDNHSCALTVEGQ 107
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++++GR YG+LG +V E +P P+ +L D+ +T + CG + AIDS+G L+ WG G
Sbjct: 108 LFSWGRGKYGQLGCGSV-ENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHG 166
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ Q G+G +D+IL P + SL++ I + G
Sbjct: 167 HWGQTGHGTQDNIL---------------------------VPKLVCSLENDNIVQASAG 199
Query: 432 NCVSFAIDSEGVLYGWG 448
+ A+ S G +Y WG
Sbjct: 200 ARHAVALTSGGGVYAWG 216
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 1 MTHLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK 60
T L + LR E +V S L TG G V + GQG G LG G
Sbjct: 21 FTSPLPRFLRGSRELLFVRVACGSSHTLAL---TGSGDVYSFGQGTFGALGHGT-TESCS 76
Query: 61 TFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG-REAEGDSEFIPQTVN 117
+ +V+ L +V++ G H+ LT +G++++WG G LG E + +P T
Sbjct: 77 SPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTAL 136
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---- 173
+ Q+ G +++A+ DG +++WG HG G G G Q L + V
Sbjct: 137 SDRLLTQVVCGADYTMAIDSDGQLFSWG-----HGHWGQTGHGTQDNILVPKLVCSLEND 191
Query: 174 -IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
IV+ ++GA H V LTS G + G EQGQ+
Sbjct: 192 NIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 106/239 (44%), Gaps = 29/239 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-----VVEVVVGGMHTVCLTEDGKVYTW 93
+++ G G+ GQLGL D T L L V V G HT+ LT G VY++
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G GALG G +E V + VQI+ GD+HS AL +G +++WG R
Sbjct: 60 GQGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWG--RG 114
Query: 150 SHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G +Q P+ S + ++ GAD+ + + S G L + G GQ G
Sbjct: 115 KYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHG 174
Query: 208 TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
TQ + L P V L+ +I G + ++S G + A+G N Q+
Sbjct: 175 TQD----------NILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 174/397 (43%), Gaps = 67/397 (16%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K PL ES+S + +++A G +T+ G +
Sbjct: 3894 GAIYGWG--HNHRGQLGGLEGAKV-KLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYA 3950
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G LGR+ G ++ VP + I VF G + +
Sbjct: 3951 TG---YGALGRL-----------GTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLAL 3996
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P LI++L + +A G HHS A++
Sbjct: 3997 SSEGHVYSWGEGDDGKLGHGN-------RITYDRPKLIEALLGTEIVDIACGGHHSAAIS 4049
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + S+ +PT + +LQ + +ACG + + + + +
Sbjct: 4050 SAGWLYTWGKGRYGRLGHGD-SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNV 4108
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G +Y +G+ DY
Sbjct: 4109 WSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDY 4168
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G +Y WG + QLG+G
Sbjct: 4169 HRLG-HGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGT 4227
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P + Q N T +VA G H++ + K
Sbjct: 4228 THAQQSPRLVHALQGKNIT--RVACGSAHTLAWSTTK 4262
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 57/388 (14%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLL 194
++ VY WG D GLKG I K P+ E +S + + IA G+ +++ G L
Sbjct: 2920 QNAAVYVWG-LNDKDQLGGLKGSKI-KLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 2977
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSK 250
G G+LG N G EP +P ++I G + ++
Sbjct: 2978 ACGEGTNGRLG------LGDNNNVG----EPKPIPFLSQYIIKKVAVHSGGKHALALTQD 3027
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G +LG + P LI++L K+ +A G HS A+ S G
Sbjct: 3028 GKVFSWGEGEDGKLGHGN-------RVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNG 3080
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGW 368
++Y +G +YGRLG + + + +P + +L + + +ACG + + A+ +G +Y W
Sbjct: 3081 ELYTWGLGEYGRLGHGDTTTHL-KPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139
Query: 369 GMGNGYQLGNGKED--------DILN------------------SEGKIYAFGRHDYGRL 402
G G+ +LG G D D LN G+++ +G+ DY RL
Sbjct: 3140 GDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3199
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G N V PT + L+ K + +A G A+ G +Y WG + Q GNG
Sbjct: 3200 GHGN-DHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMV 3258
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+P + L + V +VA G HS+
Sbjct: 3259 NRKPSLVHN--LEDAKVNRVACGSSHSI 3284
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 180/417 (43%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + + + GG T+ +T DGKVY
Sbjct: 3892 GSGAIYGWGHNHRGQLG-GLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYA 3950
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GALGR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 3951 TG---YGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGE 4007
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G P +E++ G IV IA G H ++S G L T G +G+
Sbjct: 4008 GDD--GKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWG---KGRY 4062
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + L+P V L+ + DV G ++ ++ ++G +
Sbjct: 4063 GRLGHGDSDDQ-------LKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4115
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I+SL+ + G S+AL G +Y +G+ DY
Sbjct: 4116 YGKLGRGGSDGCK-------VPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDY 4168
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G +Y WG + QLG+G
Sbjct: 4169 HRLG-HGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDG- 4226
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ P + +LQ K IT +ACG+ + A
Sbjct: 4227 --------------------------TTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 34/220 (15%)
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H LAL ++G +Y++G D GRLG + S EP I L D+T+T IACG+ S AI S
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGD-SFSCDEPQVIEVLSDRTVTYIACGSTYSAAISS 570
Query: 362 EGVLYGWGMGNGYQLGNGKEDDI----------------------------LNSEGKIYA 393
G L WG G+ +LG+G DDI + + G +++
Sbjct: 571 TGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFS 630
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G DYG+LG + S+ P + L D+ + + CG S A+ + G +Y WG G+ Y
Sbjct: 631 WGDGDYGKLG-RGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHY 689
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+LG+G E+ + P +EG L N V ++ G H ILA
Sbjct: 690 RLGHGNEEHVRFPKLVEG--LRNKKVRDLSVGNLH--ILA 725
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 55/368 (14%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG + V E K L + + V V GG H + LT
Sbjct: 2966 TLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALT 3025
Query: 86 EDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
+DGKV++WG ++G LG D + + + K+ I+ G HS A+ +G +Y
Sbjct: 3026 QDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALK-SKRIRDIACGSGHSAAIASNGELYT 3084
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV-----KIASGAD--HFVMLTSRGNLLTA 196
WG G G G G T LK + V +V ++A G+ + LT G++ +
Sbjct: 3085 WGL-----GEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH---IDDVFTGV-YNTFISSKGS 252
G + G+LGR G S +P+ R + + V G ++ ++ G
Sbjct: 3140 GDGDFGKLGR------------GGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGE 3187
Query: 253 ILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ +G +Y +LG D V++ P L++ L KK +A G H LA+ G+
Sbjct: 3188 VWTWGKGDYFRLGHGNDHHVRR--------PTLVEGLRGKKVVHVAVGALHCLAVTDAGQ 3239
Query: 312 IYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+YA+G +D+G+ G N S V +P+ + +L+D + +ACG+ S A W +
Sbjct: 3240 VYAWGDNDHGQQG--NGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIA---------WVL 3288
Query: 371 GNGYQLGN 378
+ LGN
Sbjct: 3289 TDQPTLGN 3296
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 48/349 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV----VEVVVGGMHTVCL 84
TL T G V G G G+LG G V L+E + +V V V GG H + L
Sbjct: 3938 TLFAVTADGKVYATGYGALGRLGTG-GVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLAL 3996
Query: 85 TEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVY 142
+ +G VY+WG D+G LG D + + + L + V I+ G HS A+ G +Y
Sbjct: 3997 SSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL-LGTEIVDIACGGHHSAAISSAGWLY 4055
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLLTAGC 198
WG R +G +G Q P + ++ G ++ +A SG + +T N+ + G
Sbjct: 4056 TWGKGR--YGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4113
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTFISSK 250
+ G+LG RG S + +VP+K + + + GV ++ ++
Sbjct: 4114 GDYGKLG------------RGGS--DGCKVPMKIESLAGL--GVVKVECGSQFSVALTRS 4157
Query: 251 GSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G++ +G +Y +LG D V++ P + +L KK +A+G H +A + +
Sbjct: 4158 GAVYTWGKGDYHRLGHGTDDHVRR--------PRKVSALQGKKIVSIATGSLHCVACSDK 4209
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G++Y +G +D G+LG + P + +LQ K IT +ACG+ + A
Sbjct: 4210 GEVYTWGDNDEGQLG-DGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 169/396 (42%), Gaps = 72/396 (18%)
Query: 75 VVGGMHTV-CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP------KKAVQISA 127
+ GG T+ ++++GK+Y G EG GR GD+ + + +P K V + +
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACG---EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHS 3016
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
G H++AL +DG V++WG D G +G P +E++ I IA G+ H
Sbjct: 3017 GGKHALALTQDGKVFSWGEGED--GKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSA 3074
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYN 244
+ S G L T G E G+LG + L+P V L + + V G +
Sbjct: 3075 AIASNGELYTWGLGEYGRLGH----------GDTTTHLKPKLVDALVGQRVIQVACGSRD 3124
Query: 245 T---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ GS+ ++G ++ +LG + G+ ++P + L+ + G
Sbjct: 3125 AQTMALTEDGSVYSWGDGDFGKLG-------RGGSDGCYSPLPVDRLNGLGVVQVECGAQ 3177
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
SLAL G+++ +G+ DY RLG N V PT + L+ K + +A G A+
Sbjct: 3178 FSLALTKYGEVWTWGKGDYFRLGHGN-DHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD 3236
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G +Y WG + Q GNG ++N +P+ + +L+
Sbjct: 3237 AGQVYAWGDNDHGQQGNGST--MVNR-------------------------KPSLVHNLE 3269
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
D + +ACG+ S A W + + LGN
Sbjct: 3270 DAKVNRVACGSSHSIA---------WVLTDQPTLGN 3296
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 155/334 (46%), Gaps = 51/334 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V + G+G+ G+LG G V K L+E L + + ++ G H+ + +G++Y
Sbjct: 3025 TQDGKVFSWGEGEDGKLGHGNRVSLDKP-RLIEALKSKRIRDIACGSGHSAAIASNGELY 3083
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAG--DSHSVALLEDGTVYAWGSF 147
TWG + G LG + + P+ V+ + ++ +Q++ G D+ ++AL EDG+VY+WG
Sbjct: 3084 TWGLGEYGRLG-HGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGD- 3141
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +G G +PL ++ ++ G+V++ GA + LT G + T G + +LG
Sbjct: 3142 -GDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3200
Query: 206 RITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ 263
R P V L+ K + V G + ++ G + A+G N++ Q
Sbjct: 3201 HGNDHHVRR----------PTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3250
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G + V + P L+ +L D K +A G HS+ A+ D L
Sbjct: 3251 QGNGSTMVNRK-------PSLVHNLEDAKVNRVACGSSHSI---------AWVLTDQPTL 3294
Query: 324 GLKNVSEPVTEPTPIPSL--------QDKTITSI 349
G + EPVT PT L QDKT T++
Sbjct: 3295 GNQ---EPVTFPTAKDPLGQATLGFTQDKTETNV 3325
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 139/298 (46%), Gaps = 55/298 (18%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL--EPGEVP 229
+V+IAS D H++ LT++G + + G + G+LG G SF EP +
Sbjct: 501 VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGH------------GDSFSCDEPQVIE 548
Query: 230 -LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L + + + G Y+ ISS G +L +G +Y +LG + P ++ +
Sbjct: 549 VLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDD-------ISIPTVVTA 601
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L+ T +A SG +L + + G ++++G DYG+LG + S+ P + L D+
Sbjct: 602 LNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLG-RGGSDGSKLPKIVDKLLDQN 660
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG S A+ + G +Y WG G+ Y+LG+G E+ +
Sbjct: 661 VVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGN 720
Query: 385 -----LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + +Y +GR+D ++ ++ V+EPT P+L K++ + CG SFA
Sbjct: 721 LHILAITEDQLVYGWGRNDACQID-PSLGAVVSEPTLCPTLSGKSVIGLVCGPMQSFA 777
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 37/303 (12%)
Query: 69 DNVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL--PKKA 122
D+VV++ G H + LT G VY+WG D G LG GDS PQ + + +
Sbjct: 499 DDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLG---HGDSFSCDEPQVIEVLSDRTV 555
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVSG----IV 175
I+ G ++S A+ G + WG GS G G GI P + +++G V
Sbjct: 556 TYIACGSTYSAAISSTGELLTWG-----RGSYGRLGHGICDDISIPTVVTALNGHTVTHV 610
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T+ G + + G + G+LG R G + + L + +
Sbjct: 611 ACGSGDSQTLCVTNSGIVFSWGDGDYGKLG--------RGGSDGSKLPKIVDKLLDQNVV 662
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
G ++ +++ G + +G ++ +LG + E + P L++ L +KK
Sbjct: 663 KVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVR-------FPKLVEGLRNKKVRD 715
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
L+ G H LA+ + +Y +GR+D ++ ++ V+EPT P+L K++ + CG
Sbjct: 716 LSVGNLHILAITEDQLVYGWGRNDACQID-PSLGAVVSEPTLCPTLSGKSVIGLVCGPMQ 774
Query: 356 SFA 358
SFA
Sbjct: 775 SFA 777
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 303 SLALNSEGKIYAFGRHDYGRL-GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+L+ + G IY +G + G+L GL+ V P P SL +A G FA+ +
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAK--VKLPLPCESLSALRPIQLAGGEQTLFAVTA 3944
Query: 362 EGVLYGWGMGNGYQLGNGKEDDI----------------------------LNSEGKIYA 393
+G +Y G G +LG G D + L+SEG +Y+
Sbjct: 3945 DGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYS 4004
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G D G+LG N P I +L I IACG S AI S G LY WG G
Sbjct: 4005 WGEGDDGKLGHGN-RITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYG 4063
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+LG+G DD L+P + L Y V+ VA G
Sbjct: 4064 RLGHGDSDDQLKPTVVTA--LQGYKVIDVACG 4093
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+GK L ++G +Y++G D GRLG + S EP I L D+T+T IACG+ S A
Sbjct: 509 DGKHYLALTTKGIVYSWGNGDGGRLGHGD-SFSCDEPQVIEVLSDRTVTYIACGSTYSAA 567
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
I S G L WG G+ +LG+G DDI P + LN +TV VA G S L
Sbjct: 568 ISSTGELLTWGRGSYGRLGHGICDDISIPTVVTA--LNGHTVTHVACGSGDSQTL 620
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKV 90
C T G+V + G GD G+LG G + + + LD NVV+V GG + LT G+V
Sbjct: 621 CVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEV 680
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWG 145
YTWG D LG E F L K V+ +S G+ H +A+ ED VY WG
Sbjct: 681 YTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWG 736
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLGN------------------------GKEDDI--LNSEG 389
+ + D G +YGWG + QLG G E + + ++G
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADG 3946
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 447
K+YA G GRLG V + V PT + S+Q I +A G A+ SEG +Y W
Sbjct: 3947 KVYATGYGALGRLGTGGV-DSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSW 4005
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G G+ +LG+G P IE L ++ +A GG HS ++
Sbjct: 4006 GEGDDGKLGHGNRITYDRPKLIEA--LLGTEIVDIACGGHHSAAIS 4049
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 37 GVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGG--MHTVCLTEDGKVYTW 93
G +LT G+G G+LG G D + T + V V G T+C+T G V++W
Sbjct: 572 GELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSW 631
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGS---FR 148
G D G LGR D +P+ V+ L + V++ G S AL G VY WG +R
Sbjct: 632 GDGDYGKLGR-GGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690
Query: 149 DSHGS 153
HG+
Sbjct: 691 LGHGN 695
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 33/283 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G+V + G GD G+LG G D ++E L + V + G ++ ++ G++
Sbjct: 517 TTKGIVYSWGNGDGGRLGHG-DSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELL 575
Query: 92 TWGCNDEGALGREAEG--DSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWG 145
TWG G+ GR G D IP V V +GDS ++ + G V++WG
Sbjct: 576 TWG---RGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWG 632
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G K P ++ + +VK+ G LT+ G + T G + +
Sbjct: 633 D--GDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG + R +E L+ K + D+ G + I+ + +G N+
Sbjct: 691 LGHGNEEHV-----RFPKLVE----GLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDAC 741
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
Q + S P L +LS K L G S A
Sbjct: 742 Q-------IDPSLGAVVSEPTLCPTLSGKSVIGLVCGPMQSFA 777
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTF-A 63
L K++ K + KVF + L T G V T G+GD +LG G + E F
Sbjct: 649 LPKIVDKLLDQNVVKVFCGGQFSAAL---TAHGEVYTWGKGDHYRLGHGNE--EHVRFPK 703
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCND 97
LVE L N V ++ VG +H + +TED VY WG ND
Sbjct: 704 LVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRND 739
>gi|379720536|ref|YP_005312667.1| BNR repeat-containing protein [Paenibacillus mucilaginosus 3016]
gi|378569208|gb|AFC29518.1| BNR repeat domain-containing protein [Paenibacillus mucilaginosus
3016]
Length = 686
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS-EFIPQTVNLPKKAV 123
V+DL+ VV V GG H++ L DG V+ WG N+ G LG + S P V V
Sbjct: 77 VKDLEEVVTVAAGGNHSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLSSVV 136
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-------TPLKLESVSGIVK 176
ISA SH++AL DGTV+AWG + G G G TP +++ + ++
Sbjct: 137 AISANFSHNLALKSDGTVWAWG-----MNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIA 191
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A+G + L S G L G G +G T S S P++ + +
Sbjct: 192 VAAGPGTSLALKSDGTLWAWG----GLVGDGTTESRS--------------TPVQAQGLS 233
Query: 237 DVFT---GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
V + G + S G++ A+G N Y QLG+ + T +TP ++ LS
Sbjct: 234 SVVSFDAGDSRFVVKSDGTVWAWGWNGYGQLGDGTT-------TTRYTPVPLQELS--SV 284
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
A+ + HSLAL S+G ++ +G + G + E TP+ + IA G
Sbjct: 285 AAFAADEWHSLALKSDGTVWEWGCNSKGEM----CYESDIRTTPVQVQDLSSAVDIAAGF 340
Query: 354 CVSFAIDSEGVLYGWGMGNGY-QLGN 378
S A+ S+G ++ WG NGY Q+G+
Sbjct: 341 EHSLAVKSDGTVWAWG-NNGYGQMGD 365
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 41/297 (13%)
Query: 37 GVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V GQ + G LG P R T V+ L +VV + H + L DG V+ WG
Sbjct: 100 GTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLSSVVAISANFSHNLALKSDGTVWAWGM 159
Query: 96 NDEGALGREAEGD---SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N+ G LG D S + P V + ++AG S+AL DGT++AWG
Sbjct: 160 NNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPGTSLALKSDGTLWAWG------- 212
Query: 153 SMGLKGEGI---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
GL G+G + TP++ + +S +V +G FV+ S G + G GQLG
Sbjct: 213 --GLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVV-KSDGTVWAWGWNGYGQLG---- 265
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTG--VYNTFISSKGSILAFGLNNYSQLGEA 267
G + VPL+ F ++ + S G++ +G N+ ++
Sbjct: 266 --------DGTTTTRYTPVPLQELSSVAAFAADEWHSLALKSDGTVWEWGCNSKGEMCY- 316
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+S+++ TP ++ LS +A+G HSLA+ S+G ++A+G + YG++G
Sbjct: 317 ESDIRT-------TPVQVQDLSSA--VDIAAGFEHSLAVKSDGTVWAWGNNGYGQMG 364
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
TP +K L ++ +A+G +HSLAL S+G ++A+G+++YG LG ++ + TP+
Sbjct: 73 TPVQVKDL--EEVVTVAAGGNHSLALKSDGTVWAWGQNEYGVLG-EDPYKTSWRLTPVQV 129
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---------------- 384
++ +I+ + A+ S+G ++ WGM N QLGNG D+
Sbjct: 130 QGLSSVVAISANFSHNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSV 189
Query: 385 ------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L S+G ++A+G GL + TP+ + ++ S G+
Sbjct: 190 IAVAAGPGTSLALKSDGTLWAWG-------GLVGDGTTESRSTPVQAQGLSSVVSFDAGD 242
Query: 433 CVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIE 470
F + S+G ++ WG NGY QLG+G P+ ++
Sbjct: 243 S-RFVVKSDGTVWAWGW-NGYGQLGDGTTTTRYTPVPLQ 279
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G++ D+ R T V+DL + V++ G H++ + DG V+ WG N
Sbjct: 301 GTVWEWGCNSKGEMCYESDI--RTTPVQVQDLSSAVDIAAGFEHSLAVKSDGTVWAWGNN 358
Query: 97 DEGALGREAE 106
G +G A
Sbjct: 359 GYGQMGDAAR 368
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 178/404 (44%), Gaps = 72/404 (17%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVN-------LPKKAVQ-ISAGDSHSVALLEDGTV 141
VY+WG N G LG G + +P L +K V+ I AG SHS + EDG V
Sbjct: 1 VYSWGKNKYGQLGL---GHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDV 57
Query: 142 YAWGSFRDSHGSMGLKG-EGIQKTPL---KLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
Y WG R G +G I+ P K+E+ G +A G +H V++T G + T G
Sbjct: 58 YTWG--RGWEGQLGHDVVTEIELEPHIVPKMEN-RGSSAVACGRNHTVVVTDNGLIYTWG 114
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
+ GQLG +S++ + P + + G ++T I +G+I ++
Sbjct: 115 ENKAGQLGTGDLKSSNSPVLIDSALNLPS--------VLSIACGEFHTVAICIEGTIWSW 166
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N QLG +++ TC+F P + ++ K A G H+L L KIYA+G
Sbjct: 167 GRNQCGQLGHGNTK------TCYF-PTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWG 219
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ YG+LGL + V +P + L+ + CG S A
Sbjct: 220 SNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMA------------------ 261
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIPSLQDKTITSIACG--NC 433
L +IY +GR+D G+LGL + + PV P + +L+ + IACG +C
Sbjct: 262 --------LMKNEQIYTWGRNDCGQLGLGHYTHSPV--PELVTALRSVRVQQIACGYDHC 311
Query: 434 VSFAIDS--EGV-----LYGWGMGNGYQLGNGKEDDILEPMKIE 470
V+F D G+ +Y WG G QLG+ + P +E
Sbjct: 312 VAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 44/365 (12%)
Query: 39 VLTCGQGDTGQLGLGPD---VMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTW 93
V + G+ GQLGLG + +L + L+ NV + G H+ + EDG VYTW
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 94 GCNDEGALGR----EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G EG LG E E + +P+ N AV + G +H+V + ++G +Y WG +
Sbjct: 61 GRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAV--ACGRNHTVVVTDNGLIYTWG--EN 116
Query: 150 SHGSMGLKGEGIQKTPLKLES---VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +G +P+ ++S + ++ IA G H V + G + + G + GQLG
Sbjct: 117 KAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGH 176
Query: 207 ITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
++ + GM+ K+ I G + ++ I A+G N Y QLG
Sbjct: 177 GNTKTCYFPTQVVGMA---------KKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLG 227
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
S+ P ++ L + G HS+AL +IY +GR+D G+LGL
Sbjct: 228 LNRSD------KAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGL 281
Query: 326 KNVSE-PVTEPTPIPSLQDKTITSIACG--NCVSFAID--SEGV-----LYGWGMGNGYQ 375
+ + PV P + +L+ + IACG +CV+F D G+ +Y WG G Q
Sbjct: 282 GHYTHSPV--PELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQ 339
Query: 376 LGNGK 380
LG+ +
Sbjct: 340 LGHNE 344
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 43/293 (14%)
Query: 229 PLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIK 286
PL RK++ + G ++ I+ G + +G QLG + +E++ PH++
Sbjct: 32 PLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIE-------LEPHIVP 84
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQD 343
+ ++ + +A G++H++ + G IY +G + G+LG LK+ + PV + +L
Sbjct: 85 KMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDS---ALNL 141
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
++ SIACG + AI EG ++ WG QLG+G
Sbjct: 142 PSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAAC 201
Query: 384 ------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+L KIYA+G + YG+LGL + V +P + L+ + CG S A
Sbjct: 202 GGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMA 261
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ +Y WG + QLG G P + L + V Q+A G H V
Sbjct: 262 LMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTA--LRSVRVQQIACGYDHCV 312
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 39/244 (15%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD----KKFTMLASGQHHSLALNS 308
+ ++G N Y QLG + + N P I SLSD K + +G+ HS +
Sbjct: 1 VYSWGKNKYGQLG-----LGHTNNVPL--PTGILSLSDPLNRKNVRSIGAGKSHSAVIAE 53
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G +Y +GR G+LG V+E EP +P ++++ +++ACG + + G++Y W
Sbjct: 54 DGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTW 113
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G QLG G LK+ + PV + +L ++ SI
Sbjct: 114 GENKAGQLGTGD-----------------------LKSSNSPVLIDS---ALNLPSVLSI 147
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
ACG + AI EG ++ WG QLG+G P ++ G + ++ A GGQH
Sbjct: 148 ACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVG--MAKKICIRAACGGQH 205
Query: 489 SVIL 492
+++L
Sbjct: 206 TLVL 209
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE---DLDNVVEVVVGGMHTVCLTEDGKV 90
T G++ T G+ GQLG G D+ + L++ +L +V+ + G HTV + +G +
Sbjct: 105 TDNGLIYTWGENKAGQLGTG-DLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTI 163
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKK-AVQISAGDSHSVALLEDGTVYAWGSFRD 149
++WG N G LG F Q V + KK ++ + G H++ L + +YAWGS +
Sbjct: 164 WSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGS--N 221
Query: 150 SHGSMGLKGEGIQKTPLKLESV-----SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
++G +GL K L+ + V SG + G H + L + T G + GQL
Sbjct: 222 AYGQLGLNRS--DKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQL 279
Query: 205 G 205
G
Sbjct: 280 G 280
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 38/249 (15%)
Query: 280 FTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
P L++ L + +A S HH LAL + G++Y++G D GRLG + + P+ EP
Sbjct: 483 LAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKL 541
Query: 338 IPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 542 ISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 601
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
+ G+++++G DYG+LG + S+ P + LQD +
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLDV 660
Query: 426 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+ CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+ VA+G
Sbjct: 661 VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAG 718
Query: 486 GQHSVILAK 494
H + L +
Sbjct: 719 STHCLALTE 727
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 73/312 (23%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
IVKIA+ +D H++ L + G + + GC + G+LG VPL+
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLE 537
Query: 232 RKHIDDVFTG--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
+ F G Y+ I+++G + +G NY +LG SE +
Sbjct: 538 EPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA---- 593
Query: 278 CFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P L+ L K +A SG +LA+ G+++++G DYG+LG + S+ P
Sbjct: 594 ---IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTP 649
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------- 384
+ LQD + + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 650 KLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG 709
Query: 385 ---------------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSI 428
L + +++++G +D + + ++P EP +P L K I I
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKP--EPAALPGLDTKHIVGI 767
Query: 429 ACGNCVSFAIDS 440
ACG SFA S
Sbjct: 768 ACGPAQSFAWSS 779
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 140/309 (45%), Gaps = 41/309 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGR-------EAEGDSEFIPQTVNLPK 120
N+V++ G H + L G+VY+WGC D G LG E + S F + +
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAG--Q 552
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VK 176
+ V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 553 RVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
SG + +T G + + G + G+LGR G + ++ K + +D
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----------GGSDGCKTPKLVEKLQDLD 659
Query: 237 DVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKKV 712
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G H LAL + +++++G +D + + ++P EP +P L K I IACG
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKP--EPAALPGLDTKHIVGIACG 770
Query: 353 NCVSFAIDS 361
SFA S
Sbjct: 771 PAQSFAWSS 779
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 23/235 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
V++WG D G LGR D P+ V + V++ G SVAL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGS-DGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG-- 683
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-- 741
Query: 206 RITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
A++ EP +P L KHI + G +F S S + GL
Sbjct: 742 HFDTLHATKP--------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 788
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 177/388 (45%), Gaps = 50/388 (12%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKT------FALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
V G GD G+LGLG V+E + F L D + GG HT+ LT+ G+V+
Sbjct: 31 VAALWGNGDYGRLGLG--VLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRVF 88
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G ND G LG + P V+ ++ V++SAG+ HS A+ DG ++ WG R+S
Sbjct: 89 ATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWG--RNS 146
Query: 151 HGSMGL-KGEG-IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +GL KG G + TP K++ ++ I +A G++H + +T G +L+ G G+LG
Sbjct: 147 GGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGH 206
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG------VYNTFISSKGSILAFGLNN 260
Q S G S P K+ D + +++ I KG++ FG
Sbjct: 207 GRQSSI-----LGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT 261
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
G ++ F P++++ + + +A G +H+ + G +Y++G ++
Sbjct: 262 EKGFGRSNEA---------FRPNIVEEIPFSE--EVACGGYHTCVVTDSGDLYSWGSNEN 310
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL-YGWGMGNGY----- 374
G LGL + SL ++ ++CG + I + + +GWG NG
Sbjct: 311 GCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWGWGGANGTFFEEG 370
Query: 375 -----QLGNGKEDDILNSEGKIYAFGRH 397
QLG+G + D E + FG++
Sbjct: 371 HSSGGQLGHGNDVDYF--EPMMVPFGKN 396
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 32/253 (12%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + F++ G + A GLN++ QLG S P + ++ +++G
Sbjct: 75 GAHTLFLTQSGRVFATGLNDFGQLGVGSSVTHT------LEPVEVSGFHER-VVEVSAGN 127
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HHS A+ ++GK++ +GR+ G+LGL K + V+ PT + L D I +A G+ S A+
Sbjct: 128 HHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAV 187
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
EG + WG +LG+G++ IL ++ +Y P I +
Sbjct: 188 TEEGEVLSWGAAGSGRLGHGRQSSILG-----FSLTTSEY-------------TPRLIKN 229
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
I IA G S ID +G L+ +G + G G+ ++ P +E +
Sbjct: 230 FDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGFGRSNEAFRPNIVEEIPFSE--- 284
Query: 480 LQVASGGQHSVIL 492
+VA GG H+ ++
Sbjct: 285 -EVACGGYHTCVV 296
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 151/356 (42%), Gaps = 60/356 (16%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A G H + LT G + G + GQLG + + + LEP EV + +
Sbjct: 71 LACGGAHTLFLTQSGRVFATGLNDFGQLGVGSSVTHT---------LEPVEVSGFHERVV 121
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+V G +++ +++ G + +G N+ QLG + K TP + L+D + M
Sbjct: 122 EVSAGNHHSCAVTADGKLFVWGRNSGGQLG-----LGKGAGKVVSTPTKVDCLTDFRIKM 176
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG------LKNVSEPVTEPTP--IPSLQDKTIT 347
+A G HS+A+ EG++ ++G GRLG + S +E TP I + I
Sbjct: 177 VALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIK 236
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-------DDILNSE------------ 388
IA G S ID +G L+ +G G E ++I SE
Sbjct: 237 KIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSNEAFRPNIVEEIPFSEEVACGGYHTCVV 296
Query: 389 ---GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL- 444
G +Y++G ++ G LGL + SL ++ ++CG + I + +
Sbjct: 297 TDSGDLYSWGSNENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVISGDDIYT 356
Query: 445 YGWGMGNGY----------QLGNGKEDDILEPMKIE-GKQLNNYTVLQVASGGQHS 489
+GWG NG QLG+G + D EPM + GK N + V+ G H+
Sbjct: 357 WGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGK---NARAVHVSCGFNHT 409
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 147/345 (42%), Gaps = 47/345 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYT 92
T G V G D GQLG+G V V + VVEV G H+ +T DGK++
Sbjct: 82 TQSGRVFATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFV 141
Query: 93 WGCNDEGALGR-EAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAW---GS 146
WG N G LG + G P V+ + ++ G HS+A+ E+G V +W GS
Sbjct: 142 WGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGS 201
Query: 147 FRDSHGS----MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
R HG +G + TP +++ G I KIA+G H + +G L G
Sbjct: 202 GRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT 261
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLN 259
+ GR S A R + +E E+P ++V G Y+T ++ G + ++G N
Sbjct: 262 EKGFGR------SNEAFR-PNIVE--EIPFS----EEVACGGYHTCVVTDSGDLYSWGSN 308
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHSLALN----------- 307
LG +++ S P ++K SL + ++ G H+ ++
Sbjct: 309 ENGCLGLGGTDMVCS-------PEILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWGWGG 361
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ G + G G+LG N + EP +P ++ ++CG
Sbjct: 362 ANGTFFEEGHSSGGQLGHGNDVD-YFEPMMVPFGKNARAVHVSCG 405
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 42/217 (19%)
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI---TSIACGNCVSFAIDSEGVLYGWGMG 371
+G DYGRLGL V E PT P + S+ACG + + G ++ G+
Sbjct: 35 WGNGDYGRLGL-GVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRVFATGLN 93
Query: 372 NGYQLGNGK--------------------------EDDILNSEGKIYAFGRHDYGRLGL- 404
+ QLG G + ++GK++ +GR+ G+LGL
Sbjct: 94 DFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLG 153
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
K + V+ PT + L D I +A G+ S A+ EG + WG +LG+G++ IL
Sbjct: 154 KGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSIL 213
Query: 465 ---------EPMKIEGKQLNNYTVLQVASGGQHSVIL 492
P I K + + ++A+G HS +
Sbjct: 214 GFSLTTSEYTPRLI--KNFDGIKIKKIAAGMLHSACI 248
>gi|156094894|ref|XP_001613483.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802357|gb|EDL43756.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 686
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 169/393 (43%), Gaps = 73/393 (18%)
Query: 43 GQGDTGQL--GLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGA 100
G G+ GQL D ++ A+ +++ +VV G MHT+ T+D +++++GCND G
Sbjct: 11 GSGECGQLPPEYCADYVQVNPTAVRNLPNDIDQVVCGSMHTIIKTKDDRLFSFGCNDMGV 70
Query: 101 LGREAEGDS----EFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
LGR+ +S E P +N K +I+ GD+H+ LLE+G V+ G FRDS G +
Sbjct: 71 LGRKTHANSTKDPEHSPTLLNFTCTSKIKKITCGDNHTAVLLENGKVFITGGFRDSCGVL 130
Query: 155 GL-----KGEGIQKTPLKLESVSG------------------------IVKIASGADHFV 185
GL +GE I K+ LE G I I+SG DH V
Sbjct: 131 GLPSFQRRGEVIPKSEEFLEVQFGQADNSGGGGSGMDVSSPDVSNHIIISNISSGEDHLV 190
Query: 186 MLTSRGNLLTA-----GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK----RKHID 236
L G + A C + RN S++ P K I
Sbjct: 191 CLEQSGEYIYAMGNSDSCQVCNAFYEVEHAHQVRN-----SYIFPNRYHFKDLGFASKIR 245
Query: 237 DVFTGVYNTFISSKGS--ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKK 292
D++ G NTF+ + S + A G N Y G + D+ ++K I+ LS K+
Sbjct: 246 DIYCGGNNTFVQLEASLDVYAIGRNAYGSCGVSMKDNIIKKFAK--------IEELSSKE 297
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT--ITSIA 350
L GQ ++ L +Y +G + LG++ E P + + ++ I +I+
Sbjct: 298 IAQLCGGQSFTVCLLKNNDLYIWGNREI--LGME-AEEDAYSPQQLTYFKKESHLIKTIS 354
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
CG + G L+GWG G GN E+D
Sbjct: 355 CGTDHCLVLTKGGKLFGWGTG-----GNDFEED 382
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 136/378 (35%), Gaps = 83/378 (21%)
Query: 161 IQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
+Q P + ++ + I ++ G+ H ++ T L + GC + G LGR T +++++
Sbjct: 27 VQVNPTAVRNLPNDIDQVVCGSMHTIIKTKDDRLFSFGCNDMGVLGRKTHANSTKDPEHS 86
Query: 220 MSFLE-PGEVPLKRKHIDDVFTGVY----NTFISS--KGSILAFGLNNYSQLGEADSEVQ 272
+ L +K+ D T V FI+ + S GL ++ + GE + +
Sbjct: 87 PTLLNFTCTSKIKKITCGDNHTAVLLENGKVFITGGFRDSCGVLGLPSFQRRGEVIPKSE 146
Query: 273 KSGNTCF-------------------FTPHLIKSLSDKKFTMLASGQHHSLALNSEGK-I 312
+ F + H+I + ++SG+ H + L G+ I
Sbjct: 147 EFLEVQFGQADNSGGGGSGMDVSSPDVSNHII-------ISNISSGEDHLVCLEQSGEYI 199
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF--AIDSEGVLYGWGM 370
YA G D +C C +F + V +
Sbjct: 200 YAMGNSD------------------------------SCQVCNAFYEVEHAHQVRNSYIF 229
Query: 371 GNGYQLGN----GKEDDI----------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
N Y + K DI L + +YA GR+ YG G+ + +
Sbjct: 230 PNRYHFKDLGFASKIRDIYCGGNNTFVQLEASLDVYAIGRNAYGSCGVSMKDNIIKKFAK 289
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
I L K I + G + + LY W GN LG E+D P ++ + +
Sbjct: 290 IEELSSKEIAQLCGGQSFTVCLLKNNDLYIW--GNREILGMEAEEDAYSPQQLTYFKKES 347
Query: 477 YTVLQVASGGQHSVILAK 494
+ + ++ G H ++L K
Sbjct: 348 HLIKTISCGTDHCLVLTK 365
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 204/487 (41%), Gaps = 90/487 (18%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAG 128
V + G HT + +DG +Y G N +G LG++ +++ P V+ + V ++ G
Sbjct: 39 VQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDR---NQYKPVQVSALETVVIKHVACG 95
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP----LKLESVSGIVKIASGADHF 184
D H++A+ + G V WG R+ G GL I+ P LK + VK+ G+ H
Sbjct: 96 DDHTLAVSDRGQVLGWG--RNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHS 153
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+ LT G L + G GQLG T R + RG VPL R V
Sbjct: 154 MALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRG--------VPLVR-----V 200
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
G +++F ++ GS+ +G N+ QLG + E N + P L++++ + +A
Sbjct: 201 ACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE-----NKAY--PTLLRNMRSQMVKHIA 253
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
GQ H+ L ++G ++ FG+ G+LG N +E P + L IT + CG +
Sbjct: 254 CGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNE--VNPRKVIDLMGSDITQVTCGKHHT 311
Query: 357 FAID-SEGVLYGWGMGNGYQLGNGKEDDILN-------------------SEGK----IY 392
++ S+G LY +G G QLG + N S+G+ IY
Sbjct: 312 LVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIY 371
Query: 393 AFGRHDYG-----------RLGLKNVSEPV--------------TEPTPIPSLQDKTITS 427
A G H + +L +++S + L+ I
Sbjct: 372 AGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKH 431
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
+ACG+ + A+ + GWG + Q G D +P + L +Y ++V G
Sbjct: 432 VACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSL 491
Query: 488 HSVILAK 494
HS+ L +
Sbjct: 492 HSMALTR 498
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 219/502 (43%), Gaps = 70/502 (13%)
Query: 27 VPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLDN--VVEV 74
VP ++ GG G V G+ D GQLGLG E K + L+ ++ + V +
Sbjct: 195 VPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNK--ENKAYPTLLRNMRSQMVKHI 252
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSV 133
G HT LT DG V+ +G EG LG + + + ++L + Q++ G H++
Sbjct: 253 ACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTL 312
Query: 134 ALL-EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL--------------ESVSGIVK-I 177
L G +YA+G + HG +G P ++ S +V+ I
Sbjct: 313 VLEGSKGRLYAFG--QGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCI 370
Query: 178 ASGADH-FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+G H F T+ + + + RI + L+ I
Sbjct: 371 YAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIK 430
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
V G +T +S + +L +G N+ Q G A +++ P +++ L+ +F
Sbjct: 431 HVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPR-----PRILRHLASYQFVK 485
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNC 354
+ G HS+AL +G+++++G + YG+LG+ + T+ PT + SL+ + +ACG
Sbjct: 486 VCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGF 545
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
SFA+ G ++GW G++D G+LGL N E + P
Sbjct: 546 HSFALTISGSVFGW--------------------------GKNDVGQLGLGN-KENKSYP 578
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
T + +++ + + IACG + + ++G ++ +G G+ QLG+G + + P K+ L
Sbjct: 579 TLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKV--IDL 636
Query: 475 NNYTVLQVASGGQHSVILAKPK 496
+ QV G H+++L K
Sbjct: 637 MGSDITQVTCGKHHTLVLEGSK 658
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 165/362 (45%), Gaps = 49/362 (13%)
Query: 142 YAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
+ WGS + +G+ G + Q+ ++ ++SG + I+ G H ++ G L G
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
+GQLG+ RN + + V +K D T +S +G +L +G
Sbjct: 64 NSKGQLGQ------DRNQYKPVQVSALETVVIKHVACGDDHT----LAVSDRGQVLGWGR 113
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N+ Q G A +++ P ++K L+ +F + G HS+AL +G+++++G +
Sbjct: 114 NDRGQCGLATGDIENKPR-----PRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDN 168
Query: 319 DYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
YG+LG+ + T+ PT + SL+ + +ACG SFA+ G ++GWG + QLG
Sbjct: 169 TYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLG 228
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGL-KNVSEP 410
G +++ +L ++G ++ FG+ G+LG N +E
Sbjct: 229 LGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNE- 287
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAID-SEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
P + L IT + CG + ++ S+G LY +G G QLG + P ++
Sbjct: 288 -VNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 346
Query: 470 EG 471
G
Sbjct: 347 PG 348
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 210/523 (40%), Gaps = 95/523 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNVV--EVVVGGMHTVCLTEDGKVYT 92
G + CG GQLG +R + V+ L+ VV V G HT+ +++ G+V
Sbjct: 56 GTLYMCGANSKGQLG-----QDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLG 110
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFR 148
WG ND G G A GD E P+ L A V++ G HS+AL DG +++WG
Sbjct: 111 WGRNDRGQCGL-ATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGD-- 167
Query: 149 DSHGSMGLKGEGIQKT--PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+++G +G+ T P +L S+ G+ V++A G H LT G++ G + GQL
Sbjct: 168 NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQL 227
Query: 205 GRITQRSAS-----RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
G + + + RN R M KHI + +++ G + FG
Sbjct: 228 GLGNKENKAYPTLLRNMRSQMV-----------KHI--ACGQDHTAMLTADGGVFLFGQG 274
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-SEGKIYAFGRH 318
+ QLG N P + L T + G+HH+L L S+G++YAFG+
Sbjct: 275 SEGQLGHG-------SNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQG 327
Query: 319 DYGRLG---LKNVSEPVTEPTP-IP--------SLQDKTITSIACG--NCVSFA------ 358
+G+LG ++ S P P P +P S + + + I G +C S A
Sbjct: 328 IHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADD 387
Query: 359 IDSEGVLYGWGMGNGYQLGNGK--------------------------EDDILNSEGKIY 392
I + + +QL +D L ++
Sbjct: 388 IQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQ 447
Query: 393 AFG--RHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
G R+D G+ GL E P + L + CG+ S A+ +G L+ WG
Sbjct: 448 VLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGD 507
Query: 450 GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG G E L +++VA GG HS L
Sbjct: 508 NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFAL 550
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 132/289 (45%), Gaps = 42/289 (14%)
Query: 68 LDNVV--EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA--- 122
L+ VV V G HT+ +++ +V WG ND G G A GD E P+ L A
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGL-ATGDIENKPRPRILRHLASYQ 482
Query: 123 -VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGI--VKI 177
V++ G HS+AL DG +++WG +++G +G+ T P +L S+ G+ V++
Sbjct: 483 FVKVCCGSLHSMALTRDGRLFSWGD--NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRV 540
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-----RNARRGMSFLEPGEVPLKR 232
A G H LT G++ G + GQLG + + S RN R M
Sbjct: 541 ACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMV----------- 589
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
KHI + +++ G + FG + QLG N P + L
Sbjct: 590 KHI--ACGQDHTAMLTADGGVFLFGQGSEGQLGHG-------SNYNEVNPRKVIDLMGSD 640
Query: 293 FTMLASGQHHSLALN-SEGKIYAFGRHDYGRLG---LKNVSEPVTEPTP 337
T + G+HH+L L S+G++YAFG+ +G+LG ++ S P P P
Sbjct: 641 ITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGP 689
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 36/238 (15%)
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQD 343
+ +LS ++ ++ G+HH+ + +G +Y G + G+LG +N +PV + +L+
Sbjct: 31 VTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDRNQYKPVQ----VSALET 86
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
I +ACG+ + A+ G + GWG + Q G D
Sbjct: 87 VVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKV 146
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCV 434
L +G+++++G + YG+LG+ + T+ PT + SL+ + +ACG
Sbjct: 147 CCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFH 206
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
SFA+ G ++GWG + QLG G +++ P + + + + V +A G H+ +L
Sbjct: 207 SFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLL--RNMRSQMVKHIACGQDHTAML 262
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 143/332 (43%), Gaps = 55/332 (16%)
Query: 39 VLTCGQGDTGQLGLGP-DVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGC 95
VL G+ D GQ GL D+ + ++ L + V+V G +H++ LT DG++++WG
Sbjct: 448 VLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGD 507
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKA--------VQISAGDSHSVALLEDGTVYAWGSF 147
N G LG + + P + V+++ G HS AL G+V+ WG
Sbjct: 508 NTYGQLGI-----GTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG-- 560
Query: 148 RDSHGSMGLKGEGIQKTPLKLESV-SGIVK-IASGADHFVMLTSRGNLLTAGCPEQGQLG 205
++ G +GL + + P L ++ S +VK IA G DH MLT+ G + G +GQLG
Sbjct: 561 KNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLG 620
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQ 263
+ + N R+ + L I V G ++T + SKG + AFG + Q
Sbjct: 621 HGSNYNEV-NPRK--------VIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQ 671
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK------IYAFGR 317
LG+ ++ +S S+ + H S A NS K IYA G
Sbjct: 672 LGQDEA----------------RSCSNPQRVPGPWVPHSSTAKNSSSKGRVVRCIYAGGH 715
Query: 318 HDYGRL--GLKNVSEPVTEPTPIPSLQDKTIT 347
H + N P+ P P Q +T
Sbjct: 716 HCFSTATNAADNPELPLDFRDPTPYQQPTCLT 747
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 VPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLDN--VVEV 74
VP ++ GG G V G+ D GQLGLG E K++ L+ ++ + V +
Sbjct: 535 VPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNK--ENKSYPTLLRNMRSQMVKHI 592
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSV 133
G HT LT DG V+ +G EG LG + + + ++L + Q++ G H++
Sbjct: 593 ACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTL 652
Query: 134 ALL-EDGTVYAWGSFRDSHGSMG 155
L G +YA+G + HG +G
Sbjct: 653 VLEGSKGRLYAFG--QGIHGQLG 673
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 170/346 (49%), Gaps = 36/346 (10%)
Query: 39 VLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
V G+ + GQL +G ++ K + +++LD + E+ G HT+ +T+DGK+Y+ G
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELD-IKEISCGEKHTLIVTKDGKLYSCG 62
Query: 95 CNDEGALGREAEGDSEFIPQTVNL-----PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
N+ G LG V L + +Q + G S+ + G V++WG R+
Sbjct: 63 SNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG--RN 120
Query: 150 SHGSMGL----KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +G K E + +K +V +V+I GA+H + LT G L + GC + GQLG
Sbjct: 121 DKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLG 180
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQL 264
+ S ++ V L+ I + +G ++FI + ++ +G N++ QL
Sbjct: 181 LGSSHSFHDTPQQI--------VCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQL 232
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D E KS P L KSL ++K ++ G+ H++AL EG +++FG +G+LG
Sbjct: 233 GLND-EYDKSH------PTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLG 285
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGW 368
N ++ P + L I+ +ACG + V+F+ S G +Y +
Sbjct: 286 -HNSTQNEILPKRVMELMGSVISQVACGRRHTVAFS-PSSGKMYAF 329
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 44/357 (12%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGC 198
V+ WG D S+G E +P ++ + I +I+ G H +++T G L + G
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 199 PEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
E G+LG + R+ S + +S L +V I ++ I++ G + ++
Sbjct: 64 NEYGELGHSKPRSRAVSIDVVELVSSLSSMQV------IQAAGGSEFSLVITTAGEVFSW 117
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N+ QLG ++ P L+KSL+ + G +H LAL +G+++++G
Sbjct: 118 GRNDKGQLGRGKLSKEEERK-----PKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG 172
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ YG+LGL + P I L+ I IA G SF + ++GW
Sbjct: 173 CNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGW-------- 224
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G++ +G+LGL + + + PT SL+++ + I+CG +
Sbjct: 225 ------------------GKNSFGQLGLNDEYDK-SHPTLCKSLRNQKVMYISCGEDHTV 265
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
A+ EG ++ +G G QLG+ + + P ++ +L + QVA G +H+V +
Sbjct: 266 ALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRV--MELMGSVISQVACGRRHTVAFS 320
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 153/344 (44%), Gaps = 41/344 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKV 90
T G V + G+ D GQLG G E + L++ L VV++ G H + LT+DG++
Sbjct: 109 TTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRL 168
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
++WGCN G LG + PQ + + QI++G +HS L V+ WG +
Sbjct: 169 FSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWG--K 226
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+S G +GL E + P +S+ ++ I+ G DH V LT G + + G GQLG
Sbjct: 227 NSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGH 286
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQL 264
+ ++ +R M + G V I V G +T F S G + AFG QL
Sbjct: 287 NSTQNEIL-PKRVMELM--GSV------ISQVACGRRHTVAFSPSSGKMYAFGSGGSGQL 337
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG--- 321
G D+ + S P I S + ++G+ S ++ +G +Y +H Y
Sbjct: 338 GLGDTSARNS-------PFPILSPN-----FPSTGRRLSQVMDHDGSLYLV-KHLYSGGD 384
Query: 322 -RLGLKNVSEPVTEPTPI----PSLQDKTITSIACGNCVSFAID 360
L L +E EP PS Q T+T+ C S +D
Sbjct: 385 HCLLLARNAEMGGEPDDFREVDPSTQITTLTAEKCEKIKSLQLD 428
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 183/403 (45%), Gaps = 49/403 (12%)
Query: 43 GQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGAL 101
G GD G+LGLG D D + + + GG HT+ LTE G+VY G N+ G L
Sbjct: 103 GNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFGQL 162
Query: 102 GREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI 161
G E P V +PK+A+ ISAG +HS + DG +Y WG + +G K
Sbjct: 163 GISDEKRFSTEPVEVRIPKEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKA 222
Query: 162 QKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ-------RSA 212
P K++S+ GIV + A G+DH + + G + + G G+LG + +S
Sbjct: 223 VHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKST 282
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSE 270
S + R + LE +K KH+ +++ + G++ FG N GEA+
Sbjct: 283 SEHTPRLIKELE----GIKVKHVAAGM--LHSACVDENGAVYIFGERATNRVSFGEANKA 336
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
TP LI +L D + +A G +H+ L G +Y++G ++ G LG N S
Sbjct: 337 T---------TPSLISTLLDCE--EVACGGYHTCVLTKGGDLYSWGSNENGCLG--NGST 383
Query: 331 PVTE-PTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
V+ P + K+ ++ ++CG + AI S G ++ WG G S
Sbjct: 384 SVSHLPERVEGPFSKSPVSKVSCGWKHTAAI-SGGAIFTWGWG--------------GSH 428
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
G G G+LG + + V +PT I ++ + ++CG
Sbjct: 429 GTFSVDGHSSGGQLGHGSDVDYV-KPTKIDLGENVKVVQVSCG 470
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 72/430 (16%)
Query: 85 TEDGKVY--TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ--ISAGDSHSVALLEDGT 140
++ GK + WG D G LG DS++ P + + + I+ G +H++ L E G
Sbjct: 92 SDSGKRFGAVWGNGDFGRLGL-GNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGR 150
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
VYA G ++ G +G+ E T P+++ + I++G +H ++T+ G L G
Sbjct: 151 VYATG--LNNFGQLGISDEKRFSTEPVEVRIPKEAMHISAGYNHSCVVTADGELYMWGVN 208
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT------GVYNTFISSKGSI 253
GQLG + ++SA + +P K +D + ++ ++ G +
Sbjct: 209 SNGQLG-LGKKSA-----------KAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEV 256
Query: 254 LAFGLNNYSQLGEADSEVQKS--GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++G +LG +T TP LIK L K +A+G HS ++ G
Sbjct: 257 FSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGA 316
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+Y FG R+ ++ T P+ I +L D +ACG + + G LY WG
Sbjct: 317 VYIFGERATNRVSFGEANKATT-PSLISTLLD--CEEVACGGYHTCVLTKGGDLYSWGSN 373
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
LGNG + ++ E V P ++ ++CG
Sbjct: 374 ENGCLGNGSTS---------------------VSHLPERVEGP-----FSKSPVSKVSCG 407
Query: 432 NCVSFAIDSEGVLYGWGMG------------NGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
+ AI S G ++ WG G +G QLG+G + D ++P KI+ + N V
Sbjct: 408 WKHTAAI-SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGE--NVKV 464
Query: 480 LQVASGGQHS 489
+QV+ G H+
Sbjct: 465 VQVSCGFNHT 474
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
+G D+GRLGL N+ + P P S + + IACG
Sbjct: 102 WGNGDFGRLGLGNLDSQWS-PVPCSSFDREMLKGIACG---------------------- 138
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGN 432
G L G++YA G +++G+LG+ + TEP IP K I+ G
Sbjct: 139 ----GAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEPVEVRIP----KEAMHISAGY 190
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S + ++G LY WG+ + QLG GK+ + + L+ + + A G HS+ +
Sbjct: 191 NHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAV 250
Query: 493 A 493
A
Sbjct: 251 A 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 36 GGVVLTCGQGDTGQLGLGPD--------VMERKTFALVEDLD--NVVEVVVGGMHTVCLT 85
GG V + G G +G+LG G + T L+++L+ V V G +H+ C+
Sbjct: 253 GGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVD 312
Query: 86 EDGKVYTWGCNDEGALGREA--EGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
E+G VY +G E A R + E + P ++ +++ G H+ L + G +Y+
Sbjct: 313 ENGAVYIFG---ERATNRVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYS 369
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLE---SVSGIVKIASGADHFVMLT-----------S 189
WGS + +G +G + P ++E S S + K++ G H ++ S
Sbjct: 370 WGS--NENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWGGS 427
Query: 190 RGNLLTAGCPEQGQLGR 206
G G GQLG
Sbjct: 428 HGTFSVDGHSSGGQLGH 444
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 177/414 (42%), Gaps = 64/414 (15%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYT--WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAG 128
V+++ + LT+ G+VY + +G E+ D E + + K
Sbjct: 149 VLQLACAERCLIALTKTGRVYMCFYSSESQGPQLMESLADKEVLKVAAHPEGK------- 201
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV-KIASGADHFVML 187
H +AL +G VY+WG +G G G G K + V IV H++ L
Sbjct: 202 --HYMALTSEGEVYSWG-----NGDGGRLGHGDTNVCYKGQKVLVIVYPYHPEGKHYMAL 254
Query: 188 TSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNT 245
TS G + + G + G+LG T RG+S + G +H+ + G Y+
Sbjct: 255 TSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLG------RHVVHIVCGSTYSA 308
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHS 303
I++ G + +G NY +LG SE Q TP L+ SL ++ + SG +
Sbjct: 309 AITADGELFTWGRGNYGRLGHGSSEDQ-------LTPTLVVSLKGRRVIDICCGSGDAQT 361
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LA+ +G ++++G DYG+LG + S+ P I LQ + I + CG S A+ G
Sbjct: 362 LAVTDDGTVWSWGDGDYGKLG-RGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTG 420
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
++ WG G+ +LG+G E E + P + L+ K
Sbjct: 421 HIWTWGKGDSQRLGHGTE---------------------------EHIRFPKQLEGLRGK 453
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP--MKIEGKQLN 475
+ +A G+ + EG +YGWG + QLG+ +P M ++GK ++
Sbjct: 454 KVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMPLDGKSIS 507
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 47/286 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++S+G + ++G + +LG D+ N C+ ++ + + G+
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHGDT------NVCYKGQKVLVIV----YPYHPEGK 249
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT----ITSIACGNCVS 356
H+ +AL SEG++Y++G D GRLG + + EPT + L K + I CG+ S
Sbjct: 250 HY-MALTSEGEVYSWGNGDGGRLGHGDTNSR-EEPTLVRGLSGKQLGRHVVHIVCGSTYS 307
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILN----------------------------SE 388
AI ++G L+ WG GN +LG+G +D L +
Sbjct: 308 AAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDD 367
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G ++++G DYG+LG + S+ P I LQ + I + CG S A+ G ++ WG
Sbjct: 368 GTVWSWGDGDYGKLG-RGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWG 426
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G+ +LG+G E+ I P ++EG L V+ VA G H +++ +
Sbjct: 427 KGDSQRLGHGTEEHIRFPKQLEG--LRGKKVVDVAVGSMHCLVMTE 470
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 170/400 (42%), Gaps = 65/400 (16%)
Query: 53 GPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI 112
GP +ME + A E L V G H + LT +G+VY+WG D G LG GD+
Sbjct: 179 GPQLME--SLADKEVLK--VAAHPEGKHYMALTSEGEVYSWGNGDGGRLG---HGDTNVC 231
Query: 113 PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
+ + H +AL +G VY+WG+ G +G ++ P + +S
Sbjct: 232 YKGQKVLVIVYPYHPEGKHYMALTSEGEVYSWGN--GDGGRLGHGDTNSREEPTLVRGLS 289
Query: 173 G------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
G +V I G+ + +T+ G L T G +G GR+ S+ L P
Sbjct: 290 GKQLGRHVVHIVCGSTYSAAITADGELFTWG---RGNYGRLGHGSSEDQ-------LTPT 339
Query: 227 -EVPLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
V LK + + D+ G ++ G++ ++G +Y +LG S+ K TP
Sbjct: 340 LVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCK-------TP 392
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+I L + + G SLAL G I+ +G+ D RLG E + P + L+
Sbjct: 393 KIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLG-HGTEEHIRFPKQLEGLR 451
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
K + +A G+ + EG +YGW GR+D G+L
Sbjct: 452 GKKVVDVAVGSMHCLVMTEEGEVYGW--------------------------GRNDQGQL 485
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
G + S ++PT +P L K+I+ IACG SF S G
Sbjct: 486 GDSSFSTK-SDPTLMP-LDGKSISGIACGPAQSFCWTSTG 523
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 169/375 (45%), Gaps = 46/375 (12%)
Query: 1 MTHLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG-PDVMER 59
M L K + K A +P K ++ T G V + G GD G+LG G +V +
Sbjct: 183 MESLADKEVLKVAAHPEGKHYM---------ALTSEGEVYSWGNGDGGRLGHGDTNVCYK 233
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV--- 116
LV V G H + LT +G+VY+WG D G LG + +S P V
Sbjct: 234 GQKVLV----IVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLG-HGDTNSREEPTLVRGL 288
Query: 117 ---NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG 173
L + V I G ++S A+ DG ++ WG R ++G +G Q TP + S+ G
Sbjct: 289 SGKQLGRHVVHIVCGSTYSAAITADGELFTWG--RGNYGRLGHGSSEDQLTPTLVVSLKG 346
Query: 174 --IVKIA--SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
++ I SG + +T G + + G + G+LGR + + ++
Sbjct: 347 RRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGR-----GGSDGCKTPKIIDR---- 397
Query: 230 LKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L+ + I V G ++ ++ G I +G + +LG E + P ++ L
Sbjct: 398 LQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIR-------FPKQLEGL 450
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 348
KK +A G H L + EG++Y +GR+D G+LG + S ++PT +P L K+I+
Sbjct: 451 RGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTK-SDPTLMP-LDGKSISG 508
Query: 349 IACGNCVSFAIDSEG 363
IACG SF S G
Sbjct: 509 IACGPAQSFCWTSTG 523
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 24/131 (18%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G + T G+GD+ +LG G + R L E L VV+V VG MH + +TE+G+VY
Sbjct: 417 TKTGHIWTWGKGDSQRLGHGTEEHIRFPKQL-EGLRGKKVVDVAVGSMHCLVMTEEGEVY 475
Query: 92 TWGCNDEGALGREAEGDSEFI----PQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGS 146
WG ND+G L GDS F P + L K++ I+ G + S + W S
Sbjct: 476 GWGRNDQGQL-----GDSSFSTKSDPTLMPLDGKSISGIACGPAQS---------FCWTS 521
Query: 147 FRDSHGSMGLK 157
H S+GL+
Sbjct: 522 --TGHWSVGLR 530
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 200/433 (46%), Gaps = 70/433 (16%)
Query: 79 MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL-LE 137
+ TV E+ ++++ G N+ G L + + K ++ AG + +A+ +
Sbjct: 455 LPTVASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMN 514
Query: 138 DGTVYAWGSFRDSH-GSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGN 192
DG V+ G + G+ + I TP++ ++SGI V A+G +H + + S G
Sbjct: 515 DGGVFTCGLNKSGQCGNGTFEERVIIATPVR--ALSGIAISMVAAANGCEHMLAVASDGA 572
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKG 251
+ + G ++GQLG + S S R S E + HI +++ +SS G
Sbjct: 573 VFSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-------KYHITTAAVSYHHSAVVSSNG 625
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+L FG+N+ QLG ++ Q TP ++ +LS + T A G +H++A S+G+
Sbjct: 626 ELLTFGMNDCGQLGLDHTQHQH-------TPQVVDALSSQVVTKAACGLYHTVAATSDGE 678
Query: 312 IYAFGRHDYGRLGL---KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+Y+FG++DYG+LGL +N+ P T + D+ I +++CG + I +G L W
Sbjct: 679 VYSFGKNDYGQLGLGHARNIKTPALVKTSLGE-SDEKIVAVSCGYYHTVTISEKGKLITW 737
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDK 423
GR+DYG+LG+ KN ++ V P P+ S
Sbjct: 738 --------------------------GRNDYGQLGIGSKEHKNSAQFV--PLPMSS---- 765
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED----DILEPMKIEGKQLNNYTV 479
I + +CG S + S G + +G N QLG G D+ P+ + L N V
Sbjct: 766 KIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSADL--PLPVPSNSLANDEV 823
Query: 480 LQVASGGQHSVIL 492
+++A+G S IL
Sbjct: 824 VRIAAGFYSSYIL 836
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 197/448 (43%), Gaps = 96/448 (21%)
Query: 24 SEAVPTL----KCKTGGGVVLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVV 75
SE +PT+ +C+ + +CGQ + G+L LG +E F + + +V
Sbjct: 452 SEMLPTVASFEECE-----LFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVA--- 503
Query: 76 VGGMHTVCLT-EDGKVYTWGCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDS 130
GG + + DG V+T G N G G + I V + V + G
Sbjct: 504 -GGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCE 562
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK--TPLKLESVSGIVKIASGA---DHFV 185
H +A+ DG V++WG + G +GL G I K TP ++S+ I + A H
Sbjct: 563 HMLAVASDGAVFSWG--YNDRGQLGL-GSTISKSHTPRMIDSLREKYHITTAAVSYHHSA 619
Query: 186 MLTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+++S G LLT G + GQLG TQ + +S + + G+Y+
Sbjct: 620 VVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALS----------SQVVTKAACGLYH 669
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL---SDKKFTMLASGQ 300
T +S G + +FG N+Y QLG + K TP L+K+ SD+K ++ G
Sbjct: 670 TVAATSDGEVYSFGKNDYGQLGLGHARNIK-------TPALVKTSLGESDEKIVAVSCGY 722
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+H++ ++ +GK+ +GR+DYG+LG+ KN ++ V P P+ S I + +CG
Sbjct: 723 YHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFV--PLPMSS----KIKNASCGCYH 776
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG-----LKNVSEP 410
S IL S G++ FGR++ G+LG L + P
Sbjct: 777 SL--------------------------ILMSNGRVMVFGRNNKGQLGAGARTLSSADLP 810
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAI 438
+ P P SL + + IA G S+ +
Sbjct: 811 L--PVPSNSLANDEVVRIAAGFYSSYIL 836
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALV-----EDLDNVVEVVVGGMHTVCLTEDG 88
T G V + G+ D GQLGLG KT ALV E + +V V G HTV ++E G
Sbjct: 674 TSDGEVYSFGKNDYGQLGLG-HARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKG 732
Query: 89 KVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
K+ TWG ND G LG +E + ++F+P + + K S G HS+ L+ +G V +G
Sbjct: 733 KLITWGRNDYGQLGIGSKEHKNSAQFVP--LPMSSKIKNASCGCYHSLILMSNGRVMVFG 790
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG------IVKIASGADHFVMLTSRGN 192
R++ G +G + L L S +V+IA+G +LT R +
Sbjct: 791 --RNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSS 841
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 35/251 (13%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS--GQHHSL 304
+ + G + GLN Q G E + TP +++LS +M+A+ G H L
Sbjct: 512 VMNDGGVFTCGLNKSGQCGNGTFEER----VIIATP--VRALSGIAISMVAAANGCEHML 565
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
A+ S+G ++++G +D G+LGL + P I SL++K + I + V
Sbjct: 566 AVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREK------------YHITTAAV 613
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
Y +++S G++ FG +D G+LGL + T P + +L +
Sbjct: 614 SY-------------HHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHT-PQVVDALSSQV 659
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ-LNNYTVLQVA 483
+T ACG + A S+G +Y +G + QLG G +I P ++ ++ ++ V+
Sbjct: 660 VTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVS 719
Query: 484 SGGQHSVILAK 494
G H+V +++
Sbjct: 720 CGYYHTVTISE 730
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 49/334 (14%)
Query: 13 AENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLG---PDVMERKTF 62
A+N K ++ ++ + C T G + T G D GQLGLG P
Sbjct: 24 ADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVK 83
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPK 120
+L ++ N+ V G HT+ T+ G++Y++G +G LG GD++ PQ +NLP+
Sbjct: 84 SLKQEGVNL--VACGRSHTIVCTKAGRLYSFGAGSDGQLGT---GDAQCATSPQLINLPE 138
Query: 121 KAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ + +SAG HS AL DGT+Y WGS S G +GL +TP +L+ S + ++
Sbjct: 139 QKYKLLSAGTDHSAALTTDGTLYMWGS--GSEGQLGLGNTDSVETPKELKFHSSVSWVSC 196
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H ++T G L T G E G+LG + LE P KH++ +
Sbjct: 197 GYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQ------------LEDTTTP---KHVESIT 241
Query: 240 T--------GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
G + IS G++ FG + QLG S +Q S P + LS+
Sbjct: 242 EKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLS------LPQKVARLSEH 295
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
K ++ G +H+ + +G +Y FG +G+LG+
Sbjct: 296 KCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGI 329
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 153/324 (47%), Gaps = 54/324 (16%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRK 233
+ I+ G +H ++T G L T G + GQLG + ++ PG V LK++
Sbjct: 39 MHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTK----------PGCVKSLKQE 88
Query: 234 HIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
++ V G +T + +K G + +FG + QLG D++ C +P LI +L ++K
Sbjct: 89 GVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQ-------CATSPQLI-NLPEQK 140
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ +L++G HS AL ++G +Y +G G+LGL N + TP +++ ++CG
Sbjct: 141 YKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTD---SVETPKELKFHSSVSWVSCG 197
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPV 411
Y I+ +GK+Y FG ++G+LGL ++ E
Sbjct: 198 Y--------------------YHTA------IVTDDGKLYTFGEKEFGKLGLTEDQLEDT 231
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE-PMKIE 470
T P + S+ +K I +ACG + I G LY +G G QLGNG L P K+
Sbjct: 232 TTPKHVESITEK-IKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKV- 289
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+L+ + V+ G H+ ++ +
Sbjct: 290 -ARLSEHKCKYVSCGDNHTAVITE 312
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 33/205 (16%)
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+ + K ++ G HS + G++Y FG +D+G+LGL ++ +P T+P + SL+ + +
Sbjct: 33 IRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHM-KPTTKPGCVKSLKQEGVN 91
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+ACG + + G++Y+FG G+LG +
Sbjct: 92 LVACGRSHTI--------------------------VCTKAGRLYSFGAGSDGQLGTGD- 124
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
++ T P I +L ++ ++ G S A+ ++G LY WG G+ QLG G D + P
Sbjct: 125 AQCATSPQLI-NLPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPK 183
Query: 468 KIEGKQLNNYTVLQVASGGQHSVIL 492
+++ + +V V+ G H+ I+
Sbjct: 184 ELK----FHSSVSWVSCGYYHTAIV 204
>gi|408794586|ref|ZP_11206191.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408461821|gb|EKJ85551.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 364
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 156/373 (41%), Gaps = 47/373 (12%)
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAG--DSHSVALLEDGTVYAW 144
+G +YTWG N+ G LG P L A +S G ++S+A+ EDG+V+ W
Sbjct: 2 NGSLYTWGRNNFGQLGSGTSTGDLTNPTITKLSTIANVVSLGFNQNNSLAITEDGSVWTW 61
Query: 145 GSFRDSHGSMGLKGE--------GIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
G+ MG G+ G + P K+ ++ V G DH V+L S G +++
Sbjct: 62 GANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGITNAVMGVYGYDHAVVLKSDGTVVSF 121
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G GQLG + + ++ P +V I + ++ ++ G + +
Sbjct: 122 GLNSVGQLGNGAGGTGTYSSSPVAVIGLPNDV------IQVIAGSEHSAALTKSGDVYVW 175
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + Y LG+ N+ TP + SLS +A+G+ H LAL ++G +YA+G
Sbjct: 176 GRDQYGNLGDGVIGTSTEVNS---TPKKVPSLS--GIVHIANGRDHILALKTDGTVYAWG 230
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
G+LG+ P PTP + S+ SFAI S+G + GWG + L
Sbjct: 231 LASSGQLGIGGTGSPAPVPTPTLVTGLYNVVSVWANGTQSFAILSDGTVKGWGANSSGNL 290
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G G L + K+Y G G + I CG +F
Sbjct: 291 GTG-----LTTPAKLYTPGDIVVGV---------------------RDIQYFGCGALHNF 324
Query: 437 AIDSEGVLYGWGM 449
AI G LYGWG
Sbjct: 325 AILKSGSLYGWGW 337
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 140/330 (42%), Gaps = 55/330 (16%)
Query: 37 GVVLTCGQGDTGQLGLG---------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
G V T G +GQLG+G D R V + N V V G H V L D
Sbjct: 56 GSVWTWGANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGITNAVMGVYGYDHAVVLKSD 115
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQ---TVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
G V ++G N G LG A G + + LP +Q+ AG HS AL + G VY W
Sbjct: 116 GTVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIGLPNDVIQVIAGSEHSAALTKSGDVYVW 175
Query: 145 GSFRDSHGSMGLKGEG----IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
G RD +G++G G + TP K+ S+SGIV IA+G DH + L + G + G
Sbjct: 176 G--RDQYGNLGDGVIGTSTEVNSTPKKVPSLSGIVHIANGRDHILALKTDGTVYAWGLAS 233
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-----------ISS 249
GQLG S P VP + TG+YN I S
Sbjct: 234 SGQLGIGGTGS-------------PAPVPTPT-----LVTGLYNVVSVWANGTQSFAILS 275
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP-HLIKSLSDKKFTMLASGQHHSLALNS 308
G++ +G N+ LG + K +TP ++ + D ++ G H+ A+
Sbjct: 276 DGTVKGWGANSSGNLGTGLTTPAK-----LYTPGDIVVGVRDIQY--FGCGALHNFAILK 328
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
G +Y +G + G +G ++ E TPI
Sbjct: 329 SGSLYGWGWNFKGSIGRADLQETWAATTPI 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 55/334 (16%)
Query: 138 DGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLL 194
+G++Y WG R++ G +G G+ T KL +++ +V + ++ + +T G++
Sbjct: 2 NGSLYTWG--RNNFGQLGSGTSTGDLTNPTITKLSTIANVVSLGFNQNNSLAITEDGSVW 59
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN----TFISSK 250
T G GQLG + + + + P P K I + GVY + S
Sbjct: 60 TWGANSSGQLGM----GNTGDLQTAATDAGPRNPPRKVPGITNAVMGVYGYDHAVVLKSD 115
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLASGQHHSLALNS 308
G++++FGLN+ QLG +G T ++ P + L + ++A G HS AL
Sbjct: 116 GTVVSFGLNSVGQLGNG------AGGTGTYSSSPVAVIGLPNDVIQVIA-GSEHSAALTK 168
Query: 309 EGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
G +Y +GR YG LG + +E + P +PSL G++
Sbjct: 169 SGDVYVWGRDQYGNLGDGVIGTSTEVNSTPKKVPSL--------------------SGIV 208
Query: 366 YGWGMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
+ + NG++ + L ++G +YA+G G+LG+ P PTP
Sbjct: 209 H---------IANGRDHILALKTDGTVYAWGLASSGQLGIGGTGSPAPVPTPTLVTGLYN 259
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ S+ SFAI S+G + GWG + LG G
Sbjct: 260 VVSVWANGTQSFAILSDGTVKGWGANSSGNLGTG 293
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 43/356 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G + T G+ + GQLG G + T + + NVV + +++ +TEDG V+TWG
Sbjct: 3 GSLYTWGRNNFGQLGSGTSTGDLTNPTITKLSTIANVVSLGFNQNNSLAITEDGSVWTWG 62
Query: 95 CNDEGALGREAEGDSEFIPQTV---NLPKK------AVQISAGDSHSVALLEDGTVYAWG 145
N G LG GD + N P+K AV G H+V L DGTV ++G
Sbjct: 63 ANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGITNAVMGVYGYDHAVVLKSDGTVVSFG 122
Query: 146 SFRDSHGSMGLKGEGI---QKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+S G +G G +P+ + + + ++++ +G++H LT G++ G +
Sbjct: 123 --LNSVGQLGNGAGGTGTYSSSPVAVIGLPNDVIQVIAGSEHSAALTKSGDVYVWGRDQY 180
Query: 202 GQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
G LG T + ++ S + R HI + + G++ A+GL
Sbjct: 181 GNLGDGVIGTSTEVNSTPKKVPSLSGIVHIANGRDHI---------LALKTDGTVYAWGL 231
Query: 259 NNYSQLGEADSEVQKSGNTC-FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ QLG + +G+ TP L+ L + ++ A+G S A+ S+G + +G
Sbjct: 232 ASSGQLG-----IGGTGSPAPVPTPTLVTGLYN-VVSVWANGT-QSFAILSDGTVKGWGA 284
Query: 318 HDYGRLGLKNVSEPVTEPTP---IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ G LG ++ P TP + ++D I CG +FAI G LYGWG
Sbjct: 285 NSSGNLG-TGLTTPAKLYTPGDIVVGVRD--IQYFGCGALHNFAILKSGSLYGWGW 337
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G +Y +GR+++G+LG + +T PT + S+ S AI +G ++ W
Sbjct: 2 NGSLYTWGRNNFGQLGSGTSTGDLTNPTITKLSTIANVVSLGFNQNNSLAITEDGSVWTW 61
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G + QLG G D+ + D G P P +P + + +
Sbjct: 62 GANSSGQLGMGNTGDLQTAA--------TDAG---------PRNPPRKVPGITNAVMGVY 104
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---ILEPMKIEGKQLNNYTVLQVASG 485
+ V + S+G + +G+ + QLGNG P+ + G L N V+QV +G
Sbjct: 105 GYDHAV--VLKSDGTVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIG--LPN-DVIQVIAG 159
Query: 486 GQHSVILAK 494
+HS L K
Sbjct: 160 SEHSAALTK 168
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 182/401 (45%), Gaps = 72/401 (17%)
Query: 141 VYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
++ WG+ SHG +G+ G + + + + + + + +IA G H + LT+ G +
Sbjct: 3 LFCWGN--ASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYAC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSIL 254
G +Q QLG + P +P L+ + + G ++ ++ G +L
Sbjct: 61 GNNDQAQLGH------------NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVL 108
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
++G N+ QLG Q + + P +I+SL K +A G +HSLAL S G++Y+
Sbjct: 109 SWGDNDCGQLG------QSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYS 162
Query: 315 FGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+G + YG+LG+K E P + +L + +IACG SF I ++G+G N
Sbjct: 163 WGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNN 222
Query: 373 GYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGL-K 405
QLG E + L +EG ++ G YG+LG
Sbjct: 223 CGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGS 282
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDIL 464
N +E + P + L TIT +ACGN + A + S G +YG+G+G+ QLGN + +
Sbjct: 283 NTNEML--PRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVT 340
Query: 465 EPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
P ++ G ++ + + Q+ SGG S++
Sbjct: 341 LPQEVLGPWVSPSDSALLQSNDAKASVVIHQIFSGGDQSIV 381
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 149/323 (46%), Gaps = 47/323 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V CG D QLG + K L+ +L N VV + G H++ LTE G+V
Sbjct: 52 TANGKVYACGNNDQAQLGHN---LPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVL 108
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG ND G LG+ + +P+ + + K VQI+ G++HS+AL G +Y+WGS +
Sbjct: 109 SWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGS--N 166
Query: 150 SHGSMGLKGE---GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+G +G+K PL+L ++ GI IA G +H +++ + G GQL
Sbjct: 167 IYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQL 226
Query: 205 G--------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G TQ R G+ F+ G+ ++ F++++G +
Sbjct: 227 GLNDESNRAYPTQLKTLRTL--GVRFVACGD--------------EFSVFLTNEGGVFTC 270
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAF 315
G Y QLG NT P ++ L T +A G H+LAL S G++Y F
Sbjct: 271 GAGTYGQLGHG-------SNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGF 323
Query: 316 GRHDYGRLGLKNVSEPVTEPTPI 338
G G+LG ++ + VT P +
Sbjct: 324 GLGSSGQLGNRS-TNSVTLPQEV 345
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 152/319 (47%), Gaps = 26/319 (8%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE-FIPQTVNLPKKAVQISAGDSH 131
++ G HT+ LT +GKVY G ND+ LG IP+ N V I+ G H
Sbjct: 40 QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPELQNY--VVVAIACGSRH 97
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
S+AL E G V +WG + G +G + I + P + S+ +V+IA G +H + LT
Sbjct: 98 SMALTEWGQVLSWGD--NDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT 155
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
S G L + G GQLG + S + + +PL + G ++F+
Sbjct: 156 SCGELYSWGSNIYGQLGVKPPQELS-HCNYPLRLTTLLGIPLA-----TIACGGNHSFLI 209
Query: 249 SKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SK S + FG NN QLG D N + P +K+L +A G S+ L
Sbjct: 210 SKSSAVFGFGRNNCGQLGLND-----ESNRAY--PTQLKTLRTLGVRFVACGDEFSVFLT 262
Query: 308 SEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVL 365
+EG ++ G YG+LG N +E + P + L TIT +ACGN + A + S G +
Sbjct: 263 NEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVPSRGRV 320
Query: 366 YGWGMGNGYQLGNGKEDDI 384
YG+G+G+ QLGN + +
Sbjct: 321 YGFGLGSSGQLGNRSTNSV 339
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P I D +A G H+L L + GK+YA G +D +LG N+ P P IP
Sbjct: 25 LIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGNNDQAQLG-HNL--PTKRPLLIP 81
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------- 384
LQ+ + +IACG+ S A+ G + WG + QLG + I
Sbjct: 82 ELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHV 141
Query: 385 ------------LNSEGKIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIAC 430
L S G++Y++G + YG+LG+K E P + +L + +IAC
Sbjct: 142 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIAC 201
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G SF I ++G+G N QLG E + P ++ K L V VA G + SV
Sbjct: 202 GGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQL--KTLRTLGVRFVACGDEFSV 259
Query: 491 IL 492
L
Sbjct: 260 FL 261
>gi|409911788|ref|YP_006890253.1| lipoprotein [Geobacter sulfurreducens KN400]
gi|298505363|gb|ADI84086.1| ATS1 domain repeat protein [Geobacter sulfurreducens KN400]
Length = 2082
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 202/473 (42%), Gaps = 61/473 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G + + GQ G+LG G + T V + V + G +HTV L +G V WG
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWG 319
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQ---ISAGDSHSVALLEDGTVYAWGSFRDSH 151
N +GA+G + P + P V I+AG S ++L +GTV+ WG +
Sbjct: 320 NNAQGAVGDGTVANRS-TPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGG--NGA 376
Query: 152 GSMGLKGEGIQKTPLKLES-VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G +G G P L + S + + G + L S G L G GQLG T
Sbjct: 377 GQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTT- 435
Query: 211 SASRNARRGMSFLEPGEVPLK----RKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG 265
P +P+ + TG ++ + + G++ A+G N+ QLG
Sbjct: 436 -------------TPSAIPVPVVGDAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLG 482
Query: 266 EADSEVQKSGNTCFFTPHLIK----SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
S V S TP I + + + +A+G+ H++ L ++G ++A+G + +G
Sbjct: 483 -IGSTVAAS------TPQQITVTNPASAGNDWAAVAAGEAHTIGLKADGTLWAWGDNTFG 535
Query: 322 RLG----LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+LG N + PV T P D+ ++A G S A+ ++G ++ WG + QLG
Sbjct: 536 QLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLG 595
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ +L + +NV + +P + + + +IA G A
Sbjct: 596 --TDPAVLAPATQ--------------RNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLA 639
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ ++G L+ WG + QLGNG P+++ + Y + +A+G HS+
Sbjct: 640 LQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPY--VSLAAGTSHSL 690
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 164/380 (43%), Gaps = 44/380 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G +GQLG G +V D N G H+V + DG ++ WG N
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGDAGNWRTTATGTAHSVAVRADGTLWAWGDN 476
Query: 97 DEGALGREAEGDSEFIPQ--TVNLPKKA----VQISAGDSHSVALLEDGTVYAWGSFRDS 150
G LG + + PQ TV P A ++AG++H++ L DGT++AWG ++
Sbjct: 477 SSGQLGIGSTVAAS-TPQQITVTNPASAGNDWAAVAAGEAHTIGLKADGTLWAWGD--NT 533
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--------IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G +G G G ++ V+G V +A+G + L + G + T G
Sbjct: 534 FGQLG-DGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 203 QLGR---ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
QLG + + RN ++ P + + + + G++ A+G N
Sbjct: 593 QLGTDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLALQADGTLWAWGAN 652
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG + T FTP + + + LA+G HSLA S+G ++A+G +
Sbjct: 653 SVGQLGNGVT-------TATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 320 YGRLGL---KNVSEPVT-EPTPIP---------SLQDKTITSIACGNCVSFAIDSEGVLY 366
G+LG ++P+ +P +P S D + + A G+ S A+ S G L+
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH-SAALKSNGTLW 764
Query: 367 GWGMGNGYQLGNG--KEDDI 384
WG QLGNG E DI
Sbjct: 765 TWGQNTSGQLGNGTTTEADI 784
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 214/506 (42%), Gaps = 86/506 (16%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G + V+ V G H++ + DG ++ WG N
Sbjct: 51 GTLWAAGSNQFGQLGDGTGINRTSP---VQVPGTWKTVAAGTTHSLGIKADGSLWAWGSN 107
Query: 97 DEGALGREAE----GDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG+ ++F P + V +SAG+ S L DGT+++WG + G
Sbjct: 108 LFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWG--NNLFG 165
Query: 153 SMGLKGEGIQKTPLKLESVSG------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G G + + P ++ V+ V +A+G +H + L + G L G
Sbjct: 166 ELG-DGTTVSR-PQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGA-------- 215
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKGSILAFGLNNY 261
+ + G + + P PLK D +T + ++ + + GS+ ++G N +
Sbjct: 216 ----NLTGQLGTGGTGILPNPTPLKIGTDRD-WTAISAGEMHSVALKADGSLWSWGQNLF 270
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
+LG V G TP + + SD + +A+G H++AL+ G + A+G + G
Sbjct: 271 GELGNG---VALPGANVT-TPTRVGTGSD--WVAIAAGALHTVALHRNGTVSAWGNNAQG 324
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+G + N S P P+ + + +IA G VSF++ + G ++GWG QLGN
Sbjct: 325 AVGDGTVANRSTPTLIVAPVTLVNN---VAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN 381
Query: 379 GKEDDI-------------------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
G + L S G ++A+G + G+LG + T
Sbjct: 382 GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLG-----DGTTT 436
Query: 414 PT--PIPSLQDK-TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P+ P+P + D + A G S A+ ++G L+ WG + QLG G P +I
Sbjct: 437 PSAIPVPVVGDAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQIT 496
Query: 471 ----GKQLNNYTVLQVASGGQHSVIL 492
N++ VA+G H++ L
Sbjct: 497 VTNPASAGNDWAA--VAAGEAHTIGL 520
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 96/379 (25%)
Query: 172 SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK 231
S + +A+G +H + L S G L AG + GQLG T G++ P +VP
Sbjct: 32 SAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGT----------GINRTSPVQVPGT 81
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE------------------------- 266
K + T ++ I + GS+ A+G N + QLG+
Sbjct: 82 WKTVAAGTT--HSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVA 139
Query: 267 ------------ADSEVQKSGNTCF---------FTPHLIK----SLSDKKFTMLASGQH 301
D + GN F P ++ LS+ ++ +A+G
Sbjct: 140 VSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H+LAL ++G ++A+G + + + PTP+ D+ T+I+ G S A+ +
Sbjct: 200 HALALQADGTLWAWGANLT-GQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKA 258
Query: 362 EGVLYGWG------MGNGYQL-----------GNGKE----------DDILNSEGKIYAF 394
+G L+ WG +GNG L G G + L+ G + A+
Sbjct: 259 DGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAW 318
Query: 395 GRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
G + G +G + N S P P+ + + +IA G VSF++ + G ++GWG
Sbjct: 319 GNNAQGAVGDGTVANRSTPTLIVAPVTLVNN---VAIAAGTGVSFSVLANGTVFGWGGNG 375
Query: 452 GYQLGNGKEDDILEPMKIE 470
QLGNG + P +
Sbjct: 376 AGQLGNGTFGAVTAPTVLS 394
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 35/200 (17%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTPIPSLQDKTITSIACG 352
+A+G +H L L S+G ++A G + +G+LG N + PV P T ++A G
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP--------GTWKTVAAG 88
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
S I ++G L+ WG QLG ++N + A + R+G N
Sbjct: 89 TTHSLGIKADGSLWAWGSNLFGQLG----QPLVNGQ---LATNKFSPIRIGTGN------ 135
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
+++ G SF + +G L+ WG +LG+G +P+++
Sbjct: 136 -----------DWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVAD 184
Query: 473 QLNNYTVLQVASGGQHSVIL 492
L+N + VA+GG+H++ L
Sbjct: 185 PLSNGRYVAVAAGGEHALAL 204
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 115/221 (52%), Gaps = 33/221 (14%)
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
+H LAL +GK+Y++G+ G LG+ N +E T PT + +L I I+ G+ S A+
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGIGN-TESQTAPTAVAALSGDRIVHISAGSMHSAAVT 576
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD----------------------------ILNSEGKIY 392
+GVLY WG G+ +LG+G +D L+ G+++
Sbjct: 577 EDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVW 636
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGN 451
++G DYG+LG + S+ P PI + + + I CGN +S A+ +G LY WG G+
Sbjct: 637 SWGDGDYGKLG-RPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGD 695
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
YQLG+G ++ + +P IEG L+ V V+ G QH V L
Sbjct: 696 TYQLGHGNQEHVRQPKLIEG--LSETVVSDVSVGAQHCVAL 734
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 210/478 (43%), Gaps = 65/478 (13%)
Query: 32 CKTGGGVVLTCGQGDTGQLGL-GPDVMERKTFALVED-LDNVVEVVVGGMHTVCLTED-- 87
CK+GG G G++ + +V +F V+D LD+ + L+ D
Sbjct: 2863 CKSGGIDTKVHGVSVLGRVDMTDKEVAANFSFLTVDDALDDDTNNMYSRRRLDLLSTDTH 2922
Query: 88 -GKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAW 144
KV+ WG ND LG + +E + ++ L + +Q + G S + +DG V+A
Sbjct: 2923 GNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIV----KIASGADHFVMLTSRGNLLTAGCPE 200
G S G +G+ G + P ++ S+S V ++ H + +T+ G + + G +
Sbjct: 2983 G--EGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQ 3040
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPL-KRKHIDDVFTGV-YNTFISSKGSILAFGL 258
GQLG + +S R P + + + KHI +V G ++ +S G + +G
Sbjct: 3041 YGQLGHGSLQSYDR----------PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQ 3090
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS-EGKIYAFGR 317
+LG DS Q P L+++L + + +A G ++ L + + ++A+G
Sbjct: 3091 GADGRLGHGDSNNQTK-------PKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGD 3143
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+G+LGLK+ S P + + I I CG + F++
Sbjct: 3144 GSFGKLGLKDGSSSTDVPVQVITFP-SNIIQIECG--MHFSV------------------ 3182
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSF 436
+L EGK+Y +G+ +Y RLG + S +P+ PT + L KTIT +A G
Sbjct: 3183 ------LLTKEGKVYTWGKGEYYRLGNDSTSVQPI--PTLVDGLASKTITQVAVGALHCL 3234
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
A+ S G +Y WG Q GN +P + L + + ++A G HS+ A+
Sbjct: 3235 ALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVAS--LKGHRICKIACGSSHSIAFAQ 3290
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 161/391 (41%), Gaps = 50/391 (12%)
Query: 140 TVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTA 196
+V+ WG + G +G ++G + K+P ES+S + I G +T G + +
Sbjct: 3835 SVFGWG--HNHRGQLGGIEGNKV-KSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYAS 3891
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G G+LG +S N + K I G + ++++G + A+
Sbjct: 3892 GYAAHGRLGI----GSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAW 3947
Query: 257 GLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G +LG G T PHLI+SL K G HS + +G +Y +
Sbjct: 3948 GEGEDGKLG--------LGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTW 3999
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNG 373
G+ YGRLG N E +P + +L+ + +T +ACG + + + G ++ WG G+
Sbjct: 4000 GKGRYGRLG-HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDY 4058
Query: 374 YQLGNG---------KEDDI-----------------LNSEGKIYAFGRHDYGRLGLKNV 407
+LG G K D + L + G +Y +G+ DY RLG +
Sbjct: 4059 GKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD 4118
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
S T + L + + I CG+ G ++ WG + Q+GN + P
Sbjct: 4119 SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPK 4178
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
+I +N + VA G HS+ + + N
Sbjct: 4179 RI--NITDNICIDHVACGSAHSIAWSSKQRN 4207
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 167/417 (40%), Gaps = 62/417 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV-VEVVVGGMHTV-CLTEDGKVYTWGCN 96
V G GQLG G + + K+ L E L + ++ GG T+ +T+DGKVY G
Sbjct: 3836 VFGWGHNHRGQLG-GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYA 3894
Query: 97 DEGALGREAEGDSEFIP------QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G LG D+ P T + K + I +G H +A+ G +YAWG D
Sbjct: 3895 AHGRLGI-GSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGED- 3952
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL P +ES+ ++ G+ H +T G+L T G G+LG
Sbjct: 3953 -GKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHND 4011
Query: 209 QRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNNYSQL 264
+ + P V LK + + V G ++ G + ++G +Y +L
Sbjct: 4012 HETQHK----------PKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKL 4061
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + GN P I SL+ K L G S+AL + G +Y +G+ DY RLG
Sbjct: 4062 G-------RGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLG 4114
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ S T + L + + I CG+ G ++ WG + Q+GN
Sbjct: 4115 HGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGN------ 4168
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
+ ++ V+ P I + I +ACG+ S A S+
Sbjct: 4169 ---------------------DTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSK 4204
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 172/425 (40%), Gaps = 69/425 (16%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD----NVVEVVVGGMHTVCLT 85
L T G V G D QLG D+ E K + +E + ++ G + ++
Sbjct: 2917 LSTDTHGNKVFVWGLNDMRQLG--TDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVS 2974
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK---KAVQISAGDSHSVALLEDGTVY 142
+DGKV+ G G LG + Q +L + V +S H +A+ DG V+
Sbjct: 2975 DDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVF 3034
Query: 143 AWGSFRDSHGSMGLKGEGIQKT---PLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
+WG G G G G ++ P +E I +++ G H ++ G L T G
Sbjct: 3035 SWGD-----GQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWG 3089
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYN--TFISSKGSIL 254
QG GR+ ++ + P V L++ I V G N T + S+
Sbjct: 3090 ---QGADGRLGHGDSNNQTK-------PKLVRALEKVRISCVACGSRNAHTLAAGDNSLW 3139
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
A+G ++ +LG D G++ P + + + G H S+ L EGK+Y
Sbjct: 3140 AWGDGSFGKLGLKD------GSSSTDVPVQVITFP-SNIIQIECGMHFSVLLTKEGKVYT 3192
Query: 315 FGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
+G+ +Y RLG + S +P+ PT + L KTIT +A G A+ S G +Y WG
Sbjct: 3193 WGKGEYYRLGNDSTSVQPI--PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEH 3250
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
Q GN I N + +I A SL+ I IACG+
Sbjct: 3251 GQQGNNST--ICNRKPQIVA-------------------------SLKGHRICKIACGSS 3283
Query: 434 VSFAI 438
S A
Sbjct: 3284 HSIAF 3288
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 33/277 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE-DLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V + GQG G LG+G + A+ D +V + G MH+ +TEDG +YT
Sbjct: 524 TKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYT 583
Query: 93 WGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYAWGS 146
WG +G+ GR G++E IP V K VQ+ +GD+H++AL + G V++WG
Sbjct: 584 WG---KGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGD 640
Query: 147 FRDSHGSMGLKGEGIQKTPLKLE---SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G K P + S S +VKI G + LT G L + GC + Q
Sbjct: 641 --GDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQ 698
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG Q R +E L + DV G + +++ + A+G N
Sbjct: 699 LGHGNQEHV-----RQPKLIE----GLSETVVSDVSVGAQHCVALTTDSDVYAWGKN--- 746
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+ EV +SG+ +P +I++ S K ++A G
Sbjct: 747 ----SSFEVNESGDI-ISSPLMIEAASGKGALLIACG 778
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 27/288 (9%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVAL 135
G H + LT+DGKVY+WG G LG +S+ P V + V ISAG HS A+
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGI-GNTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRG 191
EDG +Y WG + S+G +G + P +E ++G+ V SG H + L G
Sbjct: 576 TEDGVLYTWG--KGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 192 NLLTAGCPEQGQLGRI-TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK 250
+ + G + G+LGR + ++ G+ P + + + ++
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPV--------VKIICGNQISMALTKD 685
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G + QLG + E + P LI+ LS+ + ++ G H +AL ++
Sbjct: 686 GKLYSWGCGDTYQLGHGNQEHVRQ-------PKLIEGLSETVVSDVSVGAQHCVALTTDS 738
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+YA+G++ + + ++ P I + K IACG +F
Sbjct: 739 DVYAWGKN--SSFEVNESGDIISSPLMIEAASGKGALLIACGASETFV 784
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 28/287 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G + G+G+ G+LGLG V L+E L +V++ G H+ C+T+DG +Y
Sbjct: 3939 TTQGELYAWGEGEDGKLGLGTTV-NMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLY 3997
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSF 147
TWG G LG + +++ P+ V+ K V +GD+ ++ G V++WG
Sbjct: 3998 TWGKGRYGRLGHN-DHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGD- 4055
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G K P K++S++G ++K+ G+ + LT+ G++ T G + +LG
Sbjct: 4056 -GDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLG 4114
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQL 264
S R RR + L +++ D+ G + + ++ G + ++G N+ Q+
Sbjct: 4115 H-GDDSHQRTPRRVLGL-------LAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQI 4166
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
G ++ P I + +A G HS+A +S+ +
Sbjct: 4167 GNDTTQAVS-------VPKRINITDNICIDHVACGSAHSIAWSSKQR 4206
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 39/323 (12%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDS--HSVAL 135
H V LT G V+ + ++G +F + + P ++ +QI S H +AL
Sbjct: 474 HRVVLTVHGTVFYVM---DASMG-------DFTVEQLFFPGDEEIIQIDHNPSGNHILAL 523
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
+DG VY+WG + S+G +G+ Q P + ++SG IV I++G+ H +T G L
Sbjct: 524 TKDGKVYSWG--QGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVL 581
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
T G +G GR+ +A + + + G +K +D + + G +
Sbjct: 582 YTWG---KGSYGRLGHGNAE---DKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQV 635
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL-SDKKFTMLASGQHHSLALNSEGKI 312
++G +Y +LG S+ K P I + S + G S+AL +GK+
Sbjct: 636 WSWGDGDYGKLGRPGSDQNK-------VPKPISGIGSTSPVVKIICGNQISMALTKDGKL 688
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGM 370
Y++G D +LG N E V +P I L + ++ ++ G +CV+ DS+ +Y WG
Sbjct: 689 YSWGCGDTYQLGHGN-QEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSD--VYAWGK 745
Query: 371 GNGYQLGNGKEDDILNSEGKIYA 393
+ +++ + DI++S I A
Sbjct: 746 NSSFEV--NESGDIISSPLMIEA 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERK---TFALVEDLDNVVEVVVGGMHTVCLTEDG 88
C T G + T G+G G+LG + K AL + V G T+C T G
Sbjct: 3989 CITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASG 4048
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR S+ +P+ ++ K +++ G S+AL G VY WG
Sbjct: 4049 CVFSWGDGDYGKLGRGGNEGSK-VPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGK 4107
Query: 147 ---FRDSHGSMGLKGEGIQKTP---LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
+R HG + Q+TP L L + ++ I G+ H ++ T G + + G +
Sbjct: 4108 GDYYRLGHGD-----DSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDND 4162
Query: 201 QGQLGRITQRSASRNAR 217
+GQ+G T ++ S R
Sbjct: 4163 EGQIGNDTTQAVSVPKR 4179
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
C T G V + G GD G+LG G + + +K +L +V++++ G ++ LT G
Sbjct: 4043 CATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTG--KHVIKLLCGSQFSMALTTAG 4100
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGS 146
VYTWG D LG + + + L + + I G H + E G V++WG
Sbjct: 4101 HVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGD 4160
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQ 201
+ G +G P ++ I +A G+ H + +S+ L+ P +
Sbjct: 4161 --NDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRNLSCPLPAK 4215
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 34/240 (14%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
++++G + QLG D+ +G P ++ + F +A G H+LAL G +
Sbjct: 1 LVSWGCGEFGQLGLKDA----AGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDV 56
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
Y+FG+ +G LG +E + P + SL I IACG+ S A+ EG L+ W
Sbjct: 57 YSFGQGTFGALG-HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSW---- 111
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
GR YG+LG +V E +P P+ +L D+ +T + CG
Sbjct: 112 ----------------------GRGKYGQLGCGSV-ENHLQPVPVTALSDRLLTQVVCGA 148
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ AIDS+G L+ WG G+ Q G+G +D+IL P + L N ++Q ++G +H+V L
Sbjct: 149 DYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLV--CSLENDNIVQASAGARHAVAL 206
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 42/257 (16%)
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKG 251
L++ GC E GQLG + + N+ E+ R V G +T ++ G
Sbjct: 1 LVSWGCGEFGQLG-LKDAAGVFNSPLPRFLRGSRELLFVR-----VACGSSHTLALTGSG 54
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ +FG + LG +E S P ++ SL +A G +HS AL EG+
Sbjct: 55 DVYSFGQGTFGALGHGTTESCSS-------PVIVDSLWGLGIVQIACGDNHSCALTVEGQ 107
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++++GR YG+LG +V E +P P+ +L D+ +T + CG + AIDS+G L+ WG G
Sbjct: 108 LFSWGRGKYGQLGCGSV-ENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHG 166
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ Q G+G +D+IL P + SL++ I + G
Sbjct: 167 HWGQTGHGTQDNIL---------------------------VPKLVCSLENDNIVQASAG 199
Query: 432 NCVSFAIDSEGVLYGWG 448
+ A+ S G +Y WG
Sbjct: 200 ARHAVALTSGGGVYAWG 216
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL 64
L + LR E +V S L TG G V + GQG G LG G + +
Sbjct: 25 LPRFLRGSRELLFVRVACGSSHTLAL---TGSGDVYSFGQGTFGALGHGT-TESCSSPVI 80
Query: 65 VEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG-REAEGDSEFIPQTVNLPKK 121
V+ L +V++ G H+ LT +G++++WG G LG E + +P T +
Sbjct: 81 VDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRL 140
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVK 176
Q+ G +++A+ DG +++WG HG G G G Q L + V IV+
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWG-----HGHWGQTGHGTQDNILVPKLVCSLENDNIVQ 195
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQL 204
++GA H V LTS G + G EQGQ+
Sbjct: 196 ASAGARHAVALTSGGGVYAWGDNEQGQV 223
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISA 127
V V G HT+ LT G VY++G GALG G +E V + VQI+
Sbjct: 38 VRVACGSSHTLALTGSGDVYSFGQGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIAC 94
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKG--EGIQKTPLKLESVSGIVKIASGADHFV 185
GD+HS AL +G +++WG R +G +G +Q P+ S + ++ GAD+ +
Sbjct: 95 GDNHSCALTVEGQLFSWG--RGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTM 152
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYN 244
+ S G L + G GQ G TQ + L P V L+ +I G +
Sbjct: 153 AIDSDGQLFSWGHGHWGQTGHGTQD----------NILVPKLVCSLENDNIVQASAGARH 202
Query: 245 TF-ISSKGSILAFGLNNYSQL 264
++S G + A+G N Q+
Sbjct: 203 AVALTSGGGVYAWGDNEQGQV 223
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 182/419 (43%), Gaps = 62/419 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
V WG N +G LG DS P V+LP I+AG HS+A+ GT AWG
Sbjct: 73 TVLAWGDNKDGELGDGTTTDSS-TPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWG- 130
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ G +G TP+ ++ +G + IA+G DH + +TS G L G ++G+L
Sbjct: 131 -NNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGEL 189
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGV-YNTFISSKGSILAFGLNNYS 262
G T RR P +V L + + G+ ++ ++S G++L +GLN+
Sbjct: 190 GDGTTT------RRD----TPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDG 239
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG+ + T TP + + T +A+G HSLA+ + G I A+G + G+
Sbjct: 240 QLGDGTT-------TDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQ 292
Query: 323 LG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LG N S P+ P TIT+I G S A+ S G WG + QLG+G
Sbjct: 293 LGDGTTTNSSTPIAVNLP----ASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDG 348
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
N S P+ P D T+T+ G+ S A+
Sbjct: 349 TT-----------------------TNSSTPIAVNLP----ADTTVTATTAGSLHSLAVT 381
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKPN 498
+ G + WG + +LG+G + P+ + + TV +G HS+ L P P+
Sbjct: 382 TAGTILAWGNNSDGRLGDGTTTNSSTPIAV--NLPADTTVTATTAGSAHSMALVAPPPD 438
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 135/311 (43%), Gaps = 34/311 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G L G GQLG G A+ DL V + G H++ +T G
Sbjct: 121 TSAGTALAWGNNLFGQLGDGSTTDSSTPIAV--DLPAGTTVTAIAAGDDHSLAVTSAGTA 178
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG ND G LG + P V+LP I+AG HS+AL GTV WG
Sbjct: 179 LAWGDNDRGELG-DGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWG--L 235
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+S G +G TP+ ++ +G + IA+G+ H + +T+ G +L G GQLG
Sbjct: 236 NSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGD 295
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG--VYNTFISSKGSILAFGLNNYSQL 264
T ++S P V L G ++ ++S GS LA+G N+ QL
Sbjct: 296 GTTTNSS----------TPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQL 345
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ + T TP + +D T +G HSLA+ + G I A+G + GRLG
Sbjct: 346 GDGTT-------TNSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLG 398
Query: 325 ---LKNVSEPV 332
N S P+
Sbjct: 399 DGTTTNSSTPI 409
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G L G D G+LG G R+ + DL V + G H++ LT G V
Sbjct: 173 TSAGTALAWGDNDRGELGDG--TTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAGTV 230
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
TWG N +G LG DS P V+LP I+AG HS+A+ GT+ AWG+
Sbjct: 231 LTWGLNSDGQLGDGTTTDSS-TPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNS 289
Query: 149 DSHGSMGLKGEGIQKTPL--KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G +G TP+ L + + I I G DH + +TS G+ L G + GQLG
Sbjct: 290 D--GQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGD 347
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
T + N+ ++ +P +++ +++ G+ILA+G N+ +LG+
Sbjct: 348 GT----TTNSSTPIAV----NLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGD 399
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ T TP + +D T +G HS+AL
Sbjct: 400 GTT-------TNSSTPIAVNLPADTTVTATTAGSAHSMAL 432
>gi|147919953|ref|YP_686293.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621689|emb|CAJ36967.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 439
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 165/357 (46%), Gaps = 38/357 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV-------VEVVVGGM-HTVCLTEDG 88
G + G + GQLG G + R L++D ++ + + GG +TV L DG
Sbjct: 49 GSLWAWGNNNNGQLGDGT-YINRLVPVLIKDYTDLLGGNLIGISSIDGGYGYTVILRNDG 107
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
V+T G ND G LG+ D+ Q N+ A +I AG+ H +AL DGTV++WG
Sbjct: 108 TVWTSGNNDAGQLGQRNRADNAVFTQIPNMSNVA-RIDAGEGHVLALKVDGTVWSWGD-- 164
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+S G +G + + P ++ V GI IA+G H + T G GQLG T
Sbjct: 165 NSFGQLGNGSKALTGEPARVMGVQGIRSIAAGGRHSIA-TYGMEAYAWGDNLFGQLGDGT 223
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
S++ V ++ + DV G Y++ + G++ A+G N+Y QLG+
Sbjct: 224 YNSSNT------------PVKVRINEVTDVAAGEYHSLALLEDGTVWAWGGNDYGQLGDG 271
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
P +K + + +A+ +SLAL +G ++A+G + G LG +
Sbjct: 272 IPNNS-------LVP--VKCGNLRNVKTIAASDRYSLALKYDGTVWAWGYNGNGVLGTGS 322
Query: 328 V-SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+E EP + L D A C+ AID+ G ++ WGM QLG+G + D
Sbjct: 323 ADNERHPEPVQVKGLYDIKKIYAAPTGCM--AIDTYGNVWVWGMNQFGQLGDGTKTD 377
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 166/396 (41%), Gaps = 70/396 (17%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------------QISAGDSH 131
+ DG ++ WG N+ G LG D +I + V + K I G +
Sbjct: 45 IKNDGSLWAWGNNNNGQLG-----DGTYINRLVPVLIKDYTDLLGGNLIGISSIDGGYGY 99
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
+V L DGTV W S + G +G + ++ ++S + +I +G H + L G
Sbjct: 100 TVILRNDGTV--WTSGNNDAGQLGQRNRADNAVFTQIPNMSNVARIDAGEGHVLALKVDG 157
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
+ + G GQLG N + ++ EP V + + I + G ++ +
Sbjct: 158 TVWSWGDNSFGQLG---------NGSKALTG-EPARV-MGVQGIRSIAAGGRHSIATYGM 206
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
A+G N + QLG+ S NT P ++ + T +A+G++HSLAL +G
Sbjct: 207 EAYAWGDNLFGQLGDG---TYNSSNT----PVKVRI---NEVTDVAAGEYHSLALLEDGT 256
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++A+G +DYG+LG P P+ + + +IA + S A+ +G ++ WG
Sbjct: 257 VWAWGGNDYGQLG---DGIPNNSLVPVKCGNLRNVKTIAASDRYSLALKYDGTVWAWGYN 313
Query: 372 NGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
LG G D+ RH EP + L D A
Sbjct: 314 GNGVLGTGSADNE-----------RH--------------PEPVQVKGLYDIKKIYAAPT 348
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
C+ AID+ G ++ WGM QLG+G + D P+
Sbjct: 349 GCM--AIDTYGNVWVWGMNQFGQLGDGTKTDRYSPV 382
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 138/314 (43%), Gaps = 41/314 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G D GQLG + + F + ++ NV + G H + L DG V++WG N
Sbjct: 107 GTVWTSGNNDAGQLGQ-RNRADNAVFTQIPNMSNVARIDAGEGHVLALKVDGTVWSWGDN 165
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL--LEDGTVYAWGSFRDSHGSM 154
G LG ++ + P V + I+AG HS+A +E YAWG + G +
Sbjct: 166 SFGQLGNGSKALTGE-PARVMGVQGIRSIAAGGRHSIATYGME---AYAWGD--NLFGQL 219
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
G TP+K+ ++ + +A+G H + L G + G + GQLG ++
Sbjct: 220 GDGTYNSSNTPVKVR-INEVTDVAAGEYHSLALLEDGTVWAWGGNDYGQLGDGIPNNS-- 276
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTFISSKGSILAFGLNNYSQL--GEAD 268
VP+K ++ +V T Y+ + G++ A+G N L G AD
Sbjct: 277 ------------LVPVKCGNLRNVKTIAASDRYSLALKYDGTVWAWGYNGNGVLGTGSAD 324
Query: 269 SEVQKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+E P +K L D KK +G +A+++ G ++ +G + +G+LG
Sbjct: 325 NERHPE-------PVQVKGLYDIKKIYAAPTG---CMAIDTYGNVWVWGMNQFGQLGDGT 374
Query: 328 VSEPVTEPTPIPSL 341
++ + PS+
Sbjct: 375 KTDRYSPVPWFPSM 388
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 45/253 (17%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK------KFTMLASG 299
I + GS+ A+G NN QLG+ + + + P LIK +D + + G
Sbjct: 44 MIKNDGSLWAWGNNNNGQLGDG-TYINR------LVPVLIKDYTDLLGGNLIGISSIDGG 96
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+++ L ++G ++ G +D G+LG +N ++ T IP++ + + I G A+
Sbjct: 97 YGYTVILRNDGTVWTSGNNDAGQLGQRNRADNAVF-TQIPNMSN--VARIDAGEGHVLAL 153
Query: 360 DSEGVLYGWG------MGNGYQLGNGKEDDILNSEG-----------------KIYAFGR 396
+G ++ WG +GNG + G+ ++ +G + YA+G
Sbjct: 154 KVDGTVWSWGDNSFGQLGNGSKALTGEPARVMGVQGIRSIAAGGRHSIATYGMEAYAWGD 213
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QL 455
+ +G+LG + + TP+ ++ +T +A G S A+ +G ++ WG GN Y QL
Sbjct: 214 NLFGQLGDGTYN---SSNTPV-KVRINEVTDVAAGEYHSLALLEDGTVWAWG-GNDYGQL 268
Query: 456 GNGKEDDILEPMK 468
G+G ++ L P+K
Sbjct: 269 GDGIPNNSLVPVK 281
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 43/273 (15%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
Y + + G++ G N+ QLG+ + + FT I ++S+ + +G+ H
Sbjct: 99 YTVILRNDGTVWTSGNNDAGQLGQ-----RNRADNAVFTQ--IPNMSN--VARIDAGEGH 149
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDS 361
LAL +G ++++G + +G+LG N S+ +T EP + +Q I SIA G S A +
Sbjct: 150 VLALKVDGTVWSWGDNSFGQLG--NGSKALTGEPARVMGVQG--IRSIAAGGRHSIA--T 203
Query: 362 EGV-LYGWGMGNGYQLGNGKEDD-----------------------ILNSEGKIYAFGRH 397
G+ Y WG QLG+G + L +G ++A+G +
Sbjct: 204 YGMEAYAWGDNLFGQLGDGTYNSSNTPVKVRINEVTDVAAGEYHSLALLEDGTVWAWGGN 263
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
DYG+LG P P+ + + +IA + S A+ +G ++ WG LG
Sbjct: 264 DYGQLG---DGIPNNSLVPVKCGNLRNVKTIAASDRYSLALKYDGTVWAWGYNGNGVLGT 320
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G D+ P ++ K L + + A G ++
Sbjct: 321 GSADNERHPEPVQVKGLYDIKKIYAAPTGCMAI 353
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 191/465 (41%), Gaps = 110/465 (23%)
Query: 43 GQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGAL 101
G GD G+LGLG D + + + GG HT+ LTEDG VY G ND G L
Sbjct: 38 GNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTEDGCVYATGLNDFGQL 97
Query: 102 GREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL--KG 158
G P V KK VQISAG +HS A+ DG +Y WG +++ G +GL +
Sbjct: 98 GVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGELYMWG--KNTSGQLGLGKRA 155
Query: 159 EGIQKTPLKLESVSGI-VKIAS-GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
I P K+E + GI +K+A+ G++H V ++ G + G G+LG
Sbjct: 156 PNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGIGVSGRLGH---------- 205
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ S+L F +YS+
Sbjct: 206 -------------------------------GHESSVLGF-FKSYSE------------- 220
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
+TP LIK L K +A+G +S + G ++ FG +L LK +S+ T+P+
Sbjct: 221 ---YTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFGERGIEKLRLKEMSD-ATKPS 276
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
I L +ACG + + + G LY WG LG G D I
Sbjct: 277 LISELPSS--KEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVI------------ 322
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG--NGY- 453
++ E V P +++ ++CG + AI SEG ++ WG G NG
Sbjct: 323 ---------HLPEKVQGP-----FLKSSVSQVSCGWKHTAAI-SEGRVFTWGWGGSNGTF 367
Query: 454 ---------QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
QLG+G + D + P ++ + + LQV+ G H+
Sbjct: 368 SEVGHSSSGQLGHGSDVDYINPTRVCFGE--DVKALQVSCGFNHT 410
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 47/292 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + F++ G + A GLN++ QLG ++S+ C F +KK +++G
Sbjct: 74 GAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFG-------EEKKVVQISAGY 126
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+HS A+ +G++Y +G++ G+LGL K V PT + L+ I A G+ S AI
Sbjct: 127 NHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAI 186
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDIL---------------------------------- 385
G + WG+G +LG+G E +L
Sbjct: 187 SDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSAC 246
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ G ++ FG +L LK +S+ T+P+ I L +ACG + + + G L
Sbjct: 247 TDENGCVFVFGERGIEKLRLKEMSD-ATKPSLISELPSSK--EVACGGYHTCVLTNSGEL 303
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
Y WG LG G D I P K++G L + +V QV+ G +H+ +++ +
Sbjct: 304 YTWGSNENGCLGIGSSDVIHLPEKVQGPFLKS-SVSQVSCGWKHTAAISEGR 354
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 30/186 (16%)
Query: 310 GKIYA--FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
GK +A +G DYGRLGL N+ + +P P+ ++KT+ +IACG
Sbjct: 30 GKRFAALWGNGDYGRLGLGNL-DSQWKPVVCPAFRNKTLNAIACG--------------- 73
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
G L +G +YA G +D+G+LG+ EP + ++K +
Sbjct: 74 -----------GAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFG-EEKKVVQ 121
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
I+ G S AI +G LY WG QLG GK + P+ + + L + A G +
Sbjct: 122 ISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSE 181
Query: 488 HSVILA 493
HSV ++
Sbjct: 182 HSVAIS 187
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 179/401 (44%), Gaps = 72/401 (17%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQK--TPLKLESV--SGIVKIASGADHFVMLTSRGNLLTA 196
+Y WGS SHG +GL G ++ TP ++ + + +++ G H + LT+ G +
Sbjct: 7 LYCWGS--TSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYAC 64
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSIL 254
G + QLG + P +P L+ I + G ++ +S G +L
Sbjct: 65 GSNDYSQLGH------------DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVL 112
Query: 255 AFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G N+ QLG A + E+ + P +++ L K +A G +HSLAL S G++Y
Sbjct: 113 SWGDNDCGQLGHATEKEIVQ-------LPKVVRQLVSKTVVQIACGNNHSLALTSCGELY 165
Query: 314 AFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++G + YG+LG+ + ++ P + +L + +IACG SF I G ++GWG
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 372 NGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLK 405
N QLG E + L +EG ++ G YG+LG
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLG-H 284
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDIL 464
S P + L TIT +ACGN + A + S G +Y +G+G+ QLG ++
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLM 344
Query: 465 EPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
P + G ++ + + Q+ SGG S++
Sbjct: 345 LPQVVIGPWVSPSGSAQLQSNDSQVSLVIRQIFSGGDQSIV 385
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P ++P + V G +T F+++ G + A G N+YSQLG D ++
Sbjct: 29 LTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLGH-DLPTKR------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D ++ G HSLAL+ G++ ++G +D G+LG E V P +
Sbjct: 81 -PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACGN S A+ S G LY WG QLG +D
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP 199
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ G ++ +GR++ G+LGL + + PT + +L+ + ACG
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY-PTQLKTLRTLGVRFAACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + +EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLA 316
Query: 492 LAKPK 496
+
Sbjct: 317 FVPSR 321
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 154/340 (45%), Gaps = 49/340 (14%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q P Q + AV + C T G V CG D QLG + K
Sbjct: 26 EQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLGHD---LPTKRPQ 82
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LP 119
L+ +L + ++++ G H++ L++ G+V +WG ND G LG E + +P+ V +
Sbjct: 83 LIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVS 142
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ---KTPLKLESVSGI-- 174
K VQI+ G++HS+AL G +Y+WGS + +G +G+ PL+L ++ GI
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPL 200
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEV 228
IA G +H +++ G + G GQLG T R+ + G+ F G+
Sbjct: 201 AAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGD- 259
Query: 229 PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
++ F++++G + G Y QLG S + P ++ L
Sbjct: 260 -------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMEL 299
Query: 289 SDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
T +A G H+LA S GK+YAFG G+LG ++
Sbjct: 300 MGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRS 339
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 158/384 (41%), Gaps = 58/384 (15%)
Query: 35 GGGVVLTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G L C G GQLGLG ++ + D V +V G HT+ LT GK
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPD-TAVQQVSCGHRHTLFLTATGK 60
Query: 90 VYTWGCNDEGALGREAEGDS-EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY G ND LG + + IP+ + +QIS G HS+AL + G V +WG
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPQLIPELQDY--VIIQISCGSRHSLALSDWGQVLSWGD-- 116
Query: 149 DSHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G G +K ++L V +V+IA G +H + LTS G L + G G
Sbjct: 117 ---NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
QLG + + + + +PL G ++ IS G++ +G NN
Sbjct: 174 QLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACG----GNHSFLISKSGAVFGWGRNNCG 228
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
QLG D E ++ P +K+L A G S+ L +EG ++ G YG+
Sbjct: 229 QLGLND-ETNRA------YPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG S P + L TIT +ACGN + A
Sbjct: 282 LG-HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAF----------------------- 317
Query: 383 DILNSEGKIYAFGRHDYGRLGLKN 406
+ S GK+YAFG G+LG ++
Sbjct: 318 --VPSRGKVYAFGLGSSGQLGTRS 339
>gi|148263541|ref|YP_001230247.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
gi|146397041|gb|ABQ25674.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
Length = 1919
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 152/335 (45%), Gaps = 30/335 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + T G +GQLG G + + + D N V G H++ L DG ++ WG
Sbjct: 96 GTLWTWGANWSGQLGDG--TYNNRNYPMQIGTDTNWTVVAAGERHSIALRSDGTLWAWGD 153
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG G PQ + V I+AG HS+AL DG+++AWGS M
Sbjct: 154 NSSGQLGDPKIGIGTSTPQQIGASADWVAIAAGAYHSLALKTDGSLWAWGSGWSGQLEM- 212
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
TPL+++S S V IA+G H V + S G L G GQLG T ++
Sbjct: 213 --ASDQSDTPLQIDSESRWVAIAAGYTHSVAIKSDGTLWAWGDNSSGQLGDGTYDGSNI- 269
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
P +V I + G+ +T I S GS+ +G N QLG ++ Q
Sbjct: 270 ---------PVQVGGDTNWI-AISAGMSHTVAIKSDGSLWGWGGNWSGQLGTGTNDSQN- 318
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
P I +D + +A+G H++AL ++G ++A+G + YG++G +
Sbjct: 319 ------IPTRIDIANDWR--SVAAGDEHTIALKTDGTMWAWGNNIYGQVGDGTQENRL-- 368
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
PI +D + I+ G S A+ ++G L+ WG
Sbjct: 369 -FPIQIGKDSLWSLISTGGYNSLAVKADGTLWIWG 402
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 171/376 (45%), Gaps = 68/376 (18%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
HT + DG ++TWG N G LG + + P + ++AG+ HS+AL DG
Sbjct: 88 HTAEVKNDGTLWTWGANWSGQLGDGTYNNRNY-PMQIGTDTNWTVVAAGERHSIALRSDG 146
Query: 140 TVYAWGSFRDSHGSMGLKGEGI-QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
T++AWG +S G +G GI TP ++ + + V IA+GA H + L + G+L G
Sbjct: 147 TLWAWGD--NSSGQLGDPKIGIGTSTPQQIGASADWVAIAAGAYHSLALKTDGSLWAWGS 204
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
GQL + +S + P ++ + + + ++ I S G++ A+G
Sbjct: 205 GWSGQLEMASDQSDT-----------PLQIDSESRWVAIAAGYTHSVAIKSDGTLWAWGD 253
Query: 259 NNYSQLGE-----ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
N+ QLG+ ++ VQ G D + +++G H++A+ S+G ++
Sbjct: 254 NSSGQLGDGTYDGSNIPVQVGG--------------DTNWIAISAGMSHTVAIKSDGSLW 299
Query: 314 AFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+G + G+LG N S+ + PT I D S+A G+ + A+ ++G ++ WG
Sbjct: 300 GWGGNWSGQLGTGTNDSQNI--PTRIDIANDW--RSVAAGDEHTIALKTDGTMWAWGNNI 355
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
Q+G+G + E +++ PI +D + I+ G
Sbjct: 356 YGQVGDGTQ------ENRLF-----------------------PIQIGKDSLWSLISTGG 386
Query: 433 CVSFAIDSEGVLYGWG 448
S A+ ++G L+ WG
Sbjct: 387 YNSLAVKADGTLWIWG 402
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 170/393 (43%), Gaps = 55/393 (13%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
G HTV + +DG ++TWG N G LG + + + P + + G+ H+VAL +
Sbjct: 763 GYHTVVIQKDGSLWTWGANWNGELG-DGTTEDKLSPVHIGMGTDWADAVVGEEHTVALKK 821
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
DG ++AWG D G +G + TP+++ + +A+G+ + + L G L G
Sbjct: 822 DGGLWAWGYNGD--GELGDGTTDGKLTPVRIGFDNDWSALAAGSYYTLALKKNGTLWGWG 879
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
G LG ++ EP ++ + + +T + S GS+ A+
Sbjct: 880 YNGYGGLGDGSKTDK----------WEPVQINADADWVAIAASDTDHTVALKSDGSLWAW 929
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G NNY Q+G+ + ++S ++ D + +++G ++A+ ++G ++A+G
Sbjct: 930 GQNNYGQVGDGTNIDKESP---------VRIAIDTDWKSISAGAGFTMAIKTDGTLWAWG 980
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
R+ G+LG + P D T + G A ++G L+ WG QL
Sbjct: 981 RNSNGQLG---DGSRLNRALPARVGSDTDWTQVYAGWGHVVATKTDGSLWTWGANYSSQL 1037
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G + L E G+ NV T +D T+
Sbjct: 1038 GDGTYERKLLPENS------------GINNVLSVATLK------EDSTV----------- 1068
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
I S GVL+GWG +LG+G +DI+ P+ I
Sbjct: 1069 VIKSGGVLWGWGYNGDGELGSGTNEDIVIPIPI 1101
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 164/361 (45%), Gaps = 65/361 (18%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG- 219
+ TP E+ SG +I S + H + + G L T G GQLG T + + + G
Sbjct: 68 VDATPPGPEN-SGTSRI-SASYHTAEVKNDGTLWTWGANWSGQLGDGTYNNRNYPMQIGT 125
Query: 220 ---MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ + GE R I + S G++ A+G N+ QLG+ + S
Sbjct: 126 DTNWTVVAAGE----RHSI----------ALRSDGTLWAWGDNSSGQLGDPKIGIGTS-- 169
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
TP I + +D + +A+G +HSLAL ++G ++A+G G+L + + T
Sbjct: 170 ----TPQQIGASAD--WVAIAAGAYHSLALKTDGSLWAWGSGWSGQLEMASDQSD----T 219
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------- 383
P+ + +IA G S AI S+G L+ WG + QLG+G D
Sbjct: 220 PLQIDSESRWVAIAAGYTHSVAIKSDGTLWAWGDNSSGQLGDGTYDGSNIPVQVGGDTNW 279
Query: 384 -----------ILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACG 431
+ S+G ++ +G + G+LG N S+ + PT I D S+A G
Sbjct: 280 IAISAGMSHTVAIKSDGSLWGWGGNWSGQLGTGTNDSQNI--PTRIDIANDWR--SVAAG 335
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ + A+ ++G ++ WG Q+G+G +++ L P++I L + +++GG +S+
Sbjct: 336 DEHTIALKTDGTMWAWGNNIYGQVGDGTQENRLFPIQIGKDSLWSL----ISTGGYNSLA 391
Query: 492 L 492
+
Sbjct: 392 V 392
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 164/374 (43%), Gaps = 49/374 (13%)
Query: 28 PTLKCKTG--------GGVVLTCGQGDTGQLGLGP--DVMERKTFALVEDLDNVVEVVVG 77
PT+K +G G + T G G+LG G D + + D + VVG
Sbjct: 756 PTVKAASGYHTVVIQKDGSLWTWGANWNGELGDGTTEDKLSPVHIGMGTDW---ADAVVG 812
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
HTV L +DG ++ WG N +G LG + D + P + ++AG +++AL +
Sbjct: 813 EEHTVALKKDGGLWAWGYNGDGELG-DGTTDGKLTPVRIGFDNDWSALAAGSYYTLALKK 871
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI-ASGADHFVMLTSRGNLLTA 196
+GT++ WG G K + + P+++ + + V I AS DH V L S G+L
Sbjct: 872 NGTLWGWGYNGYGGLGDGSKTD--KWEPVQINADADWVAIAASDTDHTVALKSDGSLWAW 929
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKG 251
G GQ+G T E P+ R ID + + + I + G
Sbjct: 930 GQNNYGQVGDGTNIDK--------------ESPV-RIAIDTDWKSISAGAGFTMAIKTDG 974
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ A+G N+ QLG+ S + ++ P + SD +T + +G H +A ++G
Sbjct: 975 TLWAWGRNSNGQLGDG-SRLNRA------LPARVG--SDTDWTQVYAGWGHVVATKTDGS 1025
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ +G + +LG + P S + ++ + I S GVL+GWG
Sbjct: 1026 LWTWGANYSSQLGDGTYERKL---LPENSGINNVLSVATLKEDSTVVIKSGGVLWGWGYN 1082
Query: 372 NGYQLGNGKEDDIL 385
+LG+G +DI+
Sbjct: 1083 GDGELGSGTNEDIV 1096
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDG 88
T+ KT G + G+ GQLG G + R A V + +V G H V DG
Sbjct: 967 TMAIKTDG-TLWAWGRNSNGQLGDGSR-LNRALPARVGSDTDWTQVYAGWGHVVATKTDG 1024
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
++TWG N LG + + + +P+ + + + +V + G ++ WG
Sbjct: 1025 SLWTWGANYSSQLG-DGTYERKLLPENSGINNVLSVATLKEDSTVVIKSGGVLWGWGYNG 1083
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIV 175
D G + + P+ + S G++
Sbjct: 1084 DGELGSGTNEDIVIPIPILVPSGKGLL 1110
>gi|149924282|ref|ZP_01912654.1| RCC1 repeat domain protein [Plesiocystis pacifica SIR-1]
gi|149814862|gb|EDM74428.1| RCC1 repeat domain protein [Plesiocystis pacifica SIR-1]
Length = 728
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 190/492 (38%), Gaps = 83/492 (16%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G V G D GQLG G + +R + V +L + VEVV G HT G V WG
Sbjct: 44 GTGGVSCWGANDEGQLGDG-TLDDRSSPVPVANLADAVEVVAGRSHTCARKRSGAVVCWG 102
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
ND G LG + S P V AV ++AGD H+ A+ E V WG+ +D G +
Sbjct: 103 ANDRGQLGSGMDTASRR-PIAVRGLGDAVALAAGDDHTCAVRESDAVVCWGANQD--GQL 159
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-------- 206
G P ++ ++ V +A+G+ H G ++ G E+GQLG
Sbjct: 160 GNLTRNSWNEPAQIRGLTDAVGLAAGSRHTCARRKSGGVICWGANEKGQLGDGGTKGHER 219
Query: 207 ---ITQRSA--------SRNARR-------------GMSFLEPGEVPLKRKH--IDDVFT 240
+ Q A SR G + P V I +V
Sbjct: 220 PSVVAQLPAVQGLSAGGSRTCAHTRESVLCWGDDGAGRTVKRPAAVAKGSAADPIAEVEV 279
Query: 241 GVYNTFIS-SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+++ + G+ +G N +LG+ ++ +K P + L+D L G
Sbjct: 280 ALHHACVRFQSGAARCWGENQDGRLGDGSTQSRKQ-----PAPVSVSQLAD-----LGLG 329
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK--TITSIACGNCVSF 357
HS L S+GK+ +G G LG + + E + P K + T +A G+ S
Sbjct: 330 DRHSCGLRSDGKVLCWGDDAAGALGRGDAAAQPAETSDGPRAVRKVASATDVASGDGFSC 389
Query: 358 AIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTP 416
A L G++ +GR+D G+LG + T +P P
Sbjct: 390 A--------------------------LTQAGEVMCWGRNDLGQLGRPTGKDTFTADPAP 423
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNN 476
IP L SIA G A EG + WG QLG I P + ++ N
Sbjct: 424 IPDLD---AVSIAAGPNQVCAARREGAVVCWGDNPAGQLGRPGAQPIRRPQPVTAAKITN 480
Query: 477 YTVLQVASGGQH 488
++VA G H
Sbjct: 481 --AVEVAVGSAH 490
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 37 GVVLTCGQGDTGQLGL-GPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G V+ G GQLG G + R + N VEV VG H EDGKV WG
Sbjct: 446 GAVVCWGDNPAGQLGRPGAQPIRRPQPVTAAKITNAVEVAVGSAHGCARLEDGKVTCWGD 505
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
+ EG LG + GD V+ A + AG +H+ AL G V WG+ ++ G +G
Sbjct: 506 DSEGQLG-DGVGDRGG---KVSGLSDATMLDAGRAHTCALKRTGAVVCWGA--NNQGQIG 559
Query: 156 LKGEGIQ-----KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+ P+ + + V+I+ G +H S G + G + +LG T
Sbjct: 560 NSASAAALKTPVQAPIAVVKLPNAVEISVGPEHGCARKSDGTVACWGHNMKSELGSGT-- 617
Query: 211 SASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
S + VP+K K+ + G+ + S ++ +G N Y Q G A
Sbjct: 618 ---------ASGVWTSRVPVKGVKNAAALDVGIGFACVLSSKRLMCWGDNAYGQAGFAGD 668
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
F+P + LS T LA G+ H A G++ +G G+LG +
Sbjct: 669 ----------FSPTARQGLSGLDATQLALGRDHGCARMRNGEVRCWGDDAKGQLGDGGRA 718
Query: 330 EPVTEPTPIP 339
T P +P
Sbjct: 719 SSAT-PAEVP 727
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 188/483 (38%), Gaps = 64/483 (13%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
K+GG V+ G + GQLG G + ++V L V + GG T T + V
Sbjct: 194 KSGG--VICWGANEKGQLGDG-GTKGHERPSVVAQLPAVQGLSAGGSRTCAHTRE-SVLC 249
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG D+GA GR + + + P V+++ H+ + G WG +D G
Sbjct: 250 WG--DDGA-GRTVKRPAAVAKGSAADPIAEVEVAL--HHACVRFQSGAARCWGENQD--G 302
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G +K P + SVS + + G H L S G +L G G LGR
Sbjct: 303 RLGDGSTQSRKQPAPV-SVSQLADLGLGDRHSCGLRSDGKVLCWGDDAAGALGR------ 355
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGV-------YNTFISSKGSILAFGLNNYSQLG 265
G + +P E + + V + ++ ++ G ++ +G N+ QLG
Sbjct: 356 ------GDAAAQPAETSDGPRAVRKVASATDVASGDGFSCALTQAGEVMCWGRNDLGQLG 409
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ +T P I L +A+G + A EG + +G + G+LG
Sbjct: 410 RPTGK-----DTFTADPAPIPDL---DAVSIAAGPNQVCAARREGAVVCWGDNPAGQLG- 460
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-- 383
+ ++P+ P P+ + + +A G+ A +G + WG + QLG+G D
Sbjct: 461 RPGAQPIRRPQPVTAAKITNAVEVAVGSAHGCARLEDGKVTCWGDDSEGQLGDGVGDRGG 520
Query: 384 -------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP--TPIPSLQD 422
L G + +G ++ G++G + + P PI ++
Sbjct: 521 KVSGLSDATMLDAGRAHTCALKRTGAVVCWGANNQGQIGNSASAAALKTPVQAPIAVVKL 580
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
I+ G A S+G + WG +LG+G + ++ K + N L V
Sbjct: 581 PNAVEISVGPEHGCARKSDGTVACWGHNMKSELGSGTASGVWT-SRVPVKGVKNAAALDV 639
Query: 483 ASG 485
G
Sbjct: 640 GIG 642
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 141/373 (37%), Gaps = 59/373 (15%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
K I+ G HS A+ G V WG+ + G +G + +P+ + +++ V++ +
Sbjct: 27 KAPTAIAVGSGHSCAVRGTGGVSCWGA--NDEGQLGDGTLDDRSSPVPVANLADAVEVVA 84
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H G ++ G ++GQLG ++ R P+ + + D
Sbjct: 85 GRSHTCARKRSGAVVCWGANDRGQLGSGMDTASRR--------------PIAVRGLGDAV 130
Query: 240 TGV----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ + +++ +G N QLG + P I+ L+D
Sbjct: 131 ALAAGDDHTCAVRESDAVVCWGANQDGQLGNLT-------RNSWNEPAQIRGLTDA--VG 181
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
LA+G H+ A G + +G ++ G+LG ++ P+ + L + ++ G
Sbjct: 182 LAAGSRHTCARRKSGGVICWGANEKGQLG-DGGTKGHERPSVVAQL--PAVQGLSAGGSR 238
Query: 356 SFAIDSEGVLYGWG-MGNGYQLGN-------GKEDDILNSE------------GKIYAFG 395
+ A E VL WG G G + D I E G +G
Sbjct: 239 TCAHTRESVLC-WGDDGAGRTVKRPAAVAKGSAADPIAEVEVALHHACVRFQSGAARCWG 297
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ GRLG ++ +P P+ Q + + G+ S + S+G + WG L
Sbjct: 298 ENQDGRLG-DGSTQSRKQPAPVSVSQ---LADLGLGDRHSCGLRSDGKVLCWGDDAAGAL 353
Query: 456 GNGKEDDILEPMK 468
G G D +P +
Sbjct: 354 GRG--DAAAQPAE 364
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 176/412 (42%), Gaps = 54/412 (13%)
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAW 144
++ VY WG ND+ LG + + L K K + I+ G + ++G +YA
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3018
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPEQG 202
G + +G + P+ S I K+A SG H + LT G + + G E G
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3078
Query: 203 QLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
+LG MS +P + LK K I D+ G ++ I+S G + +GL
Sbjct: 3079 KLGH----------GNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3128
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D+ Q P L+++L + +A G ++AL ++G +Y++G
Sbjct: 3129 YGRLGHGDTVTQAR-------PKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDG 3181
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + S+ P + L + + CG S A+ G ++ WG G+ ++LG+
Sbjct: 3182 DFGKLG-RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH 3240
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
G + V +PT + L+ K I +A G A+
Sbjct: 3241 GNDHH---------------------------VRKPTLVEGLRGKKIVHVAVGALHCLAV 3273
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P + +L + V +V+ G HS+
Sbjct: 3274 TDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVH--ELEDARVNRVSCGSSHSI 3323
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 36/244 (14%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P + SDK TM+AS G+HH LAL +G +Y++G D GRLG + EP I
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHH-LALTQDGCVYSWGNGDGGRLGHGDTVS-YDEPKLI 555
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------- 385
+L +K I IACG+ S A+ G LY WG GN +LG+G DD++
Sbjct: 556 EALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTV 615
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ G ++++G DYG+LG + ++ P + L D + + C
Sbjct: 616 VHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG-RGGTDGSKTPKIVDKLLDINVVKVFC 674
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ + G +Y WG G+ Y+LG+G E+ + P IE L + + ++ G H +
Sbjct: 675 GSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIES--LRDKKIKDLSVGATHIL 732
Query: 491 ILAK 494
+L +
Sbjct: 733 VLTE 736
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 170/397 (42%), Gaps = 67/397 (16%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P ES+S + +++A G +T+ G + +
Sbjct: 3943 GAIYGWG--HNHRGQLGGLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G GR+ G+ + +P + I VF G + +
Sbjct: 4000 TG---YGAAGRL-----------GIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLAL 4045
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P LI+ L + +A G HHS A+
Sbjct: 4046 SSEGHVYSWGEGDDGKLGHGN-------KMSYDRPKLIEDLLGVEIIDIACGGHHSAAIT 4098
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + S+ P + +LQD + +ACG + + + + +
Sbjct: 4099 SAGWLYTWGKGRYGRLGHGD-SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4157
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G +Y +G+ DY
Sbjct: 4158 WSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDY 4217
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4218 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGT 4276
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + L + +VA G H++ + K
Sbjct: 4277 TSALHRPRLVHA--LQGKKITRVACGSAHTLAWSTAK 4311
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 180/419 (42%), Gaps = 69/419 (16%)
Query: 35 GGGVVLTCGQGDTGQLG--LGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKV 90
G G + G GQLG GP V K A E L + + + GG T+ +T DGKV
Sbjct: 3941 GSGAIYGWGHNHRGQLGGLEGPKV---KLPAPCESLSALRPIQLAGGEQTLFAVTADGKV 3997
Query: 91 YTWGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAW 144
Y+ G GA GR G DS IP + ++ K V +S+G H +AL +G VY+W
Sbjct: 3998 YSTG---YGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSW 4054
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G D G +G + P +E + G I+ IA G H +TS G L T G +G
Sbjct: 4055 GEGDD--GKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWG---KG 4109
Query: 203 QLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGL 258
+ GR+ + R P V L+ + DV G ++ ++ ++G
Sbjct: 4110 RYGRLGHGDSDDQLR-------PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4162
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+Y +LG S+ K P I SL+ + G S+AL G +Y +G+
Sbjct: 4163 GDYGKLGRGGSDGCK-------VPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4215
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
DY RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+
Sbjct: 4216 DYHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGD 4274
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G + + P + +LQ K IT +ACG+ + A
Sbjct: 4275 G---------------------------TTSALHRPRLVHALQGKKITRVACGSAHTLA 4306
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFALVED-LDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D V E K + + V V GG H + LT
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064
Query: 86 EDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
+DGKV++WG ++G LG D + +T+ K+ I+ G HS A+ +G +Y
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLK-SKRIRDIACGSGHSAAIASNGELYT 3123
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCP 199
WG +G +G Q P ++++ G +V++A G+ + LT+ G + + G
Sbjct: 3124 WG--LGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDG 3181
Query: 200 EQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
+ G+LGR T R G+ +E G ++ ++ G +
Sbjct: 3182 DFGKLGRGGSDGCYTPLVVERLNGLGVVQVECG--------------AQFSLALTKYGEV 3227
Query: 254 LAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+G +Y +LG D V+K P L++ L KK +A G H LA+ G++
Sbjct: 3228 WTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3279
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
YA+G +D+G+ G + +P+ + L+D + ++CG+ S A
Sbjct: 3280 YAWGDNDHGQQG-NGTTSVNRKPSLVHELEDARVNRVSCGSSHSIA 3324
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 165/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V + G G G+LG+G P ++E ++ V V GG H
Sbjct: 3987 TLFAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKK----VAVSSGGKHC 4042
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDG 139
+ L+ +G VY+WG D+G LG + + P+ + L + + I+ G HS A+ G
Sbjct: 4043 LALSSEGHVYSWGEGDDGKLGHGNKMSYDR-PKLIEDLLGVEIIDIACGGHHSAAITSAG 4101
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLLT 195
+Y WG R +G +G Q P +E++ ++ +A SG + +T N+ +
Sbjct: 4102 WLYTWGKGR--YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWS 4159
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF-TGV--------YNTF 246
G + G+LG RG S + +VPLK ID + GV ++
Sbjct: 4160 WGDGDYGKLG------------RGGS--DGCKVPLK---IDSLAGLGVIKVECGSQFSVA 4202
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G++ +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4203 LTRSGAVYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4254
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ +G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4255 CSDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4306
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G ++ ++ G + ++G + +LG D+ + P LI++L +K +A G
Sbjct: 518 GKHHLALTQDGCVYSWGNGDGGRLGHGDT-------VSYDEPKLIEALLEKNIVFIACGS 570
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 358
+S AL+ G++Y +GR +YGRLG N + V PT + +L+ T+ +ACG + +
Sbjct: 571 TYSAALSVSGELYTWGRGNYGRLGHGNFDD-VMIPTLVTTLKGHTVVHVACGSGDSQTLC 629
Query: 359 IDSEGVLYGWGMGNGYQLGNGKED------------DI--------------LNSEGKIY 392
+ + G+++ WG G+ +LG G D DI L + G++Y
Sbjct: 630 VTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVY 689
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+G+ D RLG E V P I SL+DK I ++ G + + +YGWG +
Sbjct: 690 TWGKGDTYRLG-HGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDY 748
Query: 453 YQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
Q+ I EP L++ TV+ +ASG S
Sbjct: 749 GQIDPTLGSVISEPTLC--PTLSSKTVIGLASGPTQS 783
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSV 133
G H + LT+DG VY+WG D G LG GD+ P+ + L K V I+ G ++S
Sbjct: 518 GKHHLALTQDGCVYSWGNGDGGRLG---HGDTVSYDEPKLIEALLEKNIVFIACGSTYSA 574
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTS 189
AL G +Y WG R ++G +G P + ++ G +V +A SG + +T+
Sbjct: 575 ALSVSGELYTWG--RGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTA 632
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFIS 248
G + + G + G+LGR S+ + L+ V VF G ++ ++
Sbjct: 633 SGIVFSWGDGDYGKLGR-GGTDGSKTPKIVDKLLDINVV--------KVFCGSQFSAALT 683
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G + +G + +LG E + P +I+SL DKK L+ G H L L
Sbjct: 684 AHGEVYTWGKGDTYRLGHGSEEHVR-------YPKIIESLRDKKIKDLSVGATHILVLTE 736
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ +Y +GR+DYG++ + ++EPT P+L KT+ +A G SFA
Sbjct: 737 DQFVYGWGRNDYGQID-PTLGSVISEPTLCPTLSSKTVIGLASGPTQSFA 785
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 41/253 (16%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+S +G + A G +LG D N C P S K + SG H+LA
Sbjct: 3008 IVSQEGKLYACGEGTNGRLGLGDD-----NNVCEPKPIPFLSQFVIKKVAVHSGGKHALA 3062
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +GK++++G + G+LG N + + +P I +L+ K I IACG+ S AI S G L
Sbjct: 3063 LTQDGKVFSWGEGEDGKLGHGN-NMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGEL 3121
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDK 423
Y WG+G +YGRLG + VT+ P + +L
Sbjct: 3122 YTWGLG--------------------------EYGRLGH---GDTVTQARPKLVQTLVGH 3152
Query: 424 TITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
+ +ACG + + A+ ++G +Y WG G+ +LG G D P+ +E +LN V+Q
Sbjct: 3153 RVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVE--RLNGLGVVQ 3210
Query: 482 VASGGQHSVILAK 494
V G Q S+ L K
Sbjct: 3211 VECGAQFSLALTK 3223
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 51/296 (17%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
+ IAS +D H + LT G + + G + G+LG +S+ EP + L
Sbjct: 509 VTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGH----------GDTVSYDEPKLIEAL 558
Query: 231 KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G Y+ +S G + +G NY +LG + + P L+ +L
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDD-------VMIPTLVTTLK 611
Query: 290 DKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+A SG +L + + G ++++G DYG+LG + ++ P + L D +
Sbjct: 612 GHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG-RGGTDGSKTPKIVDKLLDINVV 670
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------- 384
+ CG+ S A+ + G +Y WG G+ Y+LG+G E+ +
Sbjct: 671 KVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATH 730
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +Y +GR+DYG++ + ++EPT P+L KT+ +A G SFA
Sbjct: 731 ILVLTEDQFVYGWGRNDYGQID-PTLGSVISEPTLCPTLSSKTVIGLASGPTQSFA 785
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 44/319 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V + G+G+ G+LG G + M L+E L + + ++ G H+ + +G++Y
Sbjct: 3064 TQDGKVFSWGEGEDGKLGHGNN-MSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELY 3122
Query: 92 TWGCNDEGALGREAEGD--SEFIPQTVN--LPKKAVQISAG--DSHSVALLEDGTVYAWG 145
TWG + G LG GD ++ P+ V + + VQ++ G D+ ++AL DG VY+WG
Sbjct: 3123 TWGLGEYGRLG---HGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWG 3179
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G +G G TPL +E ++ G+V++ GA + LT G + T G + +
Sbjct: 3180 D--GDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3237
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYS 262
LG + + R + +E L+ K I V G + ++ G + A+G N++
Sbjct: 3238 LGH-----GNDHHVRKPTLVE----GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3288
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL---------NSEGKIY 313
Q G + V + P L+ L D + ++ G HS+A N E +
Sbjct: 3289 QQGNGTTSVNRK-------PSLVHELEDARVNRVSCGSSHSIAWVLVDQPSSGNQEPVTF 3341
Query: 314 AFGRHDYGR--LGLKNVSE 330
R G+ LGL N E
Sbjct: 3342 PTARDPLGQMCLGLTNAPE 3360
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 123/285 (43%), Gaps = 37/285 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D + L+E L N+V + G ++ L+ G++Y
Sbjct: 525 TQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVSGELY 583
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSF 147
TWG + G LG D IP V K V +GDS ++ + G V++WG
Sbjct: 584 TWGRGNYGRLG-HGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGD- 641
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G KTP ++ + I VK+ G+ LT+ G + T G + +LG
Sbjct: 642 -GDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG 700
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQ- 263
S R +E L+ K I D+ G + + ++ + +G N+Y Q
Sbjct: 701 H-----GSEEHVRYPKIIE----SLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751
Query: 264 ---LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
LG SE P L +LS K LASG S A
Sbjct: 752 DPTLGSVISE-----------PTLCPTLSSKTVIGLASGPTQSFA 785
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G GD G+LG G KT +V+ L NVV+V G + LT G+
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRG-GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGE 687
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
VYTWG D LG +E + +L K ++ +S G +H + L ED VY WG R
Sbjct: 688 VYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWG--R 745
Query: 149 DSHGSM 154
+ +G +
Sbjct: 746 NDYGQI 751
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLGN------------------------GKEDDI--LNSEG 389
+ + D G +YGWG + QLG G E + + ++G
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADG 3995
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 447
K+Y+ G GRLG+ ++ V PT + S+Q I +A G A+ SEG +Y W
Sbjct: 3996 KVYSTGYGAAGRLGIGG-TDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSW 4054
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G G+ +LG+G + P IE L ++ +A GG HS +
Sbjct: 4055 GEGDDGKLGHGNKMSYDRPKLIE--DLLGVEIIDIACGGHHSAAI 4097
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 180/419 (42%), Gaps = 58/419 (13%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
G++Y WG N G LG EG +P + +Q++ G+ A+ DG VYA G
Sbjct: 3614 GQIYGWGHNHRGQLG-GVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATG 3672
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + P LES+ + V + SG H + L+S G + + G E
Sbjct: 3673 -YGAGGRLGIGGAESV-TVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGED 3730
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L +V +D G ++ I++ G + +G Y
Sbjct: 3731 GKLGHGNKLPCDRP--RIIESLRGKDV------VDVACGGAHSAAITALGELYTWGKGRY 3782
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSE--GKIYAFGR 317
+LG DS+ Q P L+++L + +A SG + A+ E G ++++G
Sbjct: 3783 GRLGHGDSDDQ-------LKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGD 3835
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
DYG+LG + S+ PT I SL I + CG+ S A+ + G +Y WG G
Sbjct: 3836 GDYGKLG-RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKG------ 3888
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V E V P + +LQ K + SI+ G
Sbjct: 3889 --------------------DYHRLG-HGVDEHVRRPKKVMTLQGKKVISISTGALHCVV 3927
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G I +P + L N + +V+ G H+V + K
Sbjct: 3928 CTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAA--LQNKKINRVSCGSAHTVAWSTCK 3984
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 62/420 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS-AGDSHSVALL-EDGTVYAWGS 146
+VY WG ND+ LG +G +PQ V+ IS AG S S+ L+ + G YA G
Sbjct: 2699 RVYVWGLNDKEQLG-GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACG- 2756
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG----IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
S+G +GL +P ++ ++S V + SG H + LT+ G + + G + G
Sbjct: 2757 -EGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDG 2815
Query: 203 QLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
+LG +T R F + DV G ++ ++S G + +GL
Sbjct: 2816 KLGHGDVTSLDTPRCIEALNGF-----------RVRDVAAGSNHSAAVTSSGELYTWGLG 2864
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D+ Q TP ++SL ++ ++ G +LAL G +Y++G
Sbjct: 2865 EYGRLGHGDNLTQ-------LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGD 2917
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE + P + L + + CG S A+ G +Y WG G+ ++LG
Sbjct: 2918 GDFGKLG-RGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLG 2976
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+G + + V PT + L+ K + ++ G A
Sbjct: 2977 HGSD---------------------------QHVRWPTLVEGLRGKKVIGVSVGALHCLA 3009
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
+ G ++ WG + Q GNG P ++G ++ + +VA G HSV P+P
Sbjct: 3010 VTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQG--IDGIKITRVACGSSHSVAWTAPEP 3067
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 181/418 (43%), Gaps = 63/418 (15%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVY 91
GGG + G GQLG G + + K + E L + + + GG T+ +T DG+VY
Sbjct: 3611 VGGGQIYGWGHNHRGQLG-GVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVY 3669
Query: 92 TWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
G G +S +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 3670 ATG-YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEG 3728
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
D G +G + P +ES+ G +V +A G H +T+ G L T G +G+ G
Sbjct: 3729 ED--GKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWG---KGRYG 3783
Query: 206 RITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSK--GSILAFGLN 259
R+ + L+P V L + DV G I+ + G++ ++G
Sbjct: 3784 RLGHGDSDDQ-------LKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDG 3836
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+Y +LG S+ K P I+SLS + G S+AL++ G +Y +G+ D
Sbjct: 3837 DYGKLGRGGSDGCK-------IPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGD 3889
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
Y RLG V E V P + +LQ K + SI+ G +G +Y WG + QLG+G
Sbjct: 3890 YHRLG-HGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDG 3948
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
I +P + +LQ+K I ++CG+ + A
Sbjct: 3949 TTTGI---------------------------QKPRLVAALQNKKINRVSCGSAHTVA 3979
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 158/341 (46%), Gaps = 42/341 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDV---MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
T G CG+G G+LGLG + AL + + V V GG H + LT DG+V
Sbjct: 2747 TQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRV 2806
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
++WG D+G LG + S P+ + + ++AG +HS A+ G +Y WG
Sbjct: 2807 FSWGEGDDGKLG-HGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWG--L 2863
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
+G +G Q TP ++ES+ G +V+++ G+ + L G + + G + G+L
Sbjct: 2864 GEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKL 2923
Query: 205 GRITQRSAS------RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
GR S + + G+ +E G ++ ++ G + +G
Sbjct: 2924 GRGGSEGCSSPCLVDKLSGLGVCHVECG--------------AQFSVALTCNGHVYTWGK 2969
Query: 259 NNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+Y +LG +D V+ P L++ L KK ++ G H LA+ G+++A+G
Sbjct: 2970 GDYFRLGHGSDQHVR--------WPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGD 3021
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G +++ PT + + IT +ACG+ S A
Sbjct: 3022 NDHGQQGNGSITVN-RRPTLVQGIDGIKITRVACGSSHSVA 3061
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 153/307 (49%), Gaps = 37/307 (12%)
Query: 18 QKVFVTSEAVPT----LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNV 71
Q VFV AV + + G V + G+G+ G+LG G + + ++E L +V
Sbjct: 3697 QHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHG-NKLPCDRPRIIESLRGKDV 3755
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQIS--A 127
V+V GG H+ +T G++YTWG G LG + D + P+ V L + + ++ +
Sbjct: 3756 VDVACGGAHSAAITALGELYTWGKGRYGRLG-HGDSDDQLKPKLVEALLGYRVMDVACGS 3814
Query: 128 GDSHSVALLED--GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADH 183
GD+ + A+ ++ GTV++WG +G +G G K P K+ES+S GI+K+ G+
Sbjct: 3815 GDAQTCAITDEEGGTVWSWGD--GDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQF 3872
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
V L++ G++ T G + +LG + RR + L+ K + + TG
Sbjct: 3873 SVALSNNGSVYTWGKGDYHRLG----HGVDEHVRRPKKVMT-----LQGKKVISISTGAL 3923
Query: 244 NTFI-SSKGSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ + + +G + +G N+ QLG+ + +QK P L+ +L +KK ++ G
Sbjct: 3924 HCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQK--------PRLVAALQNKKINRVSCGSA 3975
Query: 302 HSLALNS 308
H++A ++
Sbjct: 3976 HTVAWST 3982
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 20/146 (13%)
Query: 49 QLGLGPDVMERKTFALVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
+L L ++R F +V+ L + +VV + + L+ DGKVYT ND+ R
Sbjct: 246 RLDLSAATVDR--FTVVQKLPITIDQVVCTALGLLILSGDGKVYTISYNDQEPTLRNLNC 303
Query: 108 DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
S F P + AG+ L G VY W DS + +
Sbjct: 304 FSAF-------PVAEIGFMAGNCVCAVLTHSGQVYLWPWMEDSDDN----------PTMV 346
Query: 168 LESVSGIVKIASGADHFVMLTSRGNL 193
+ S IV+I+ G ++ V L+ G +
Sbjct: 347 IISDQDIVRISCGDEYGVALSKNGEI 372
>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
Length = 388
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 161/337 (47%), Gaps = 33/337 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G QLG G +R + V++LD+V+ + GG + + DG + WG N
Sbjct: 49 GTVWAWGANSNAQLGDGTKT-DRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSN 107
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D P V V + AG SHS+A+ DG+V+AWG +++G +G
Sbjct: 108 LFGQLGDGTTYD-RLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWG--WNTYGQLGD 164
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP++++++ +V +A+G+ H + + + G++ G GQLG T ++
Sbjct: 165 GTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTEST--- 221
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFIS---SKGSILAFGLNNYSQLGEADSEVQ 272
VP++ + V + NTF S S G++ A+G N+ QLG SE
Sbjct: 222 -----------VPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLG---SETA 267
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
S +P ++ ++SG +SLAL ++G ++A+G + G+LG +
Sbjct: 268 ASN-----SPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTT--- 319
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
+ P+ + ++ S+A G A+ S G ++ WG
Sbjct: 320 SSSAPVQVTRLGSVVSVAAGPLHGLAVQSGGTVWDWG 356
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 166/382 (43%), Gaps = 62/382 (16%)
Query: 72 VEVVVGGM-HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
VE GG H++ L +DG V+ WG N LG + D + P V + ISAG +
Sbjct: 32 VEAAAGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTD-RYSPIPVKNLDSVIGISAGGA 90
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
S A+ DGT +AWGS + G +G + TP++++ + +V + +G+ H + + +
Sbjct: 91 ASFAVRSDGTAWAWGS--NLFGQLGDGTTYDRLTPVQVQGLHSVVALEAGSSHSLAVKAD 148
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----YNTF 246
G++ G GQLG T S S P++ + +D V ++
Sbjct: 149 GSVWAWGWNTYGQLGDGTTDSRS--------------TPVQVQALDSVVAVAAGSGHSLA 194
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ + GS+ A+G N QLG+ T P + L +++G S AL
Sbjct: 195 VKADGSVWAWGANWSGQLGDGT-------YTESTVPVQVTGLG--SVVSVSAGNTFSSAL 245
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
S+G ++A+G +D G+LG + + P+P+ + +I+ G+ S A+ ++G ++
Sbjct: 246 KSDGTVWAWGANDSGQLGSETAAS--NSPSPVQVTGMASAAAISSGSDYSLALKNDGTVW 303
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
WG + QLGNG + P+ + ++
Sbjct: 304 AWGYNSSGQLGNGTT-----------------------------TSSSAPVQVTRLGSVV 334
Query: 427 SIACGNCVSFAIDSEGVLYGWG 448
S+A G A+ S G ++ WG
Sbjct: 335 SVAAGPLHGLAVQSGGTVWDWG 356
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 22/287 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G GQLG G +R T V+ L +VV + G H++ + DG V+ WG N
Sbjct: 99 GTAWAWGSNLFGQLGDGT-TYDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWN 157
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + DS P V V ++AG HS+A+ DG+V+AWG+ + G +G
Sbjct: 158 TYGQLG-DGTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADGSVWAWGA--NWSGQLGD 214
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P+++ + +V +++G L S G + G + GQLG T S S +
Sbjct: 215 GTYTESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPS- 273
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P +V Y+ + + G++ A+G N+ QLG +
Sbjct: 274 --------PVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTT------- 318
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
T P + L +A+G H LA+ S G ++ +G + YG+L
Sbjct: 319 TSSSAPVQVTRLG--SVVSVAAGPLHGLAVQSGGTVWDWGNNTYGQL 363
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 158/358 (44%), Gaps = 68/358 (18%)
Query: 163 KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF 222
KTP++ A G H + L G + G QLG T+
Sbjct: 29 KTPVE--------AAAGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRYS-------- 72
Query: 223 LEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
P+ K++D V G + + S G+ A+G N + QLG+ + +
Sbjct: 73 ------PIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDR------ 120
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
TP ++ L L +G HSLA+ ++G ++A+G + YG+LG ++ + P +
Sbjct: 121 -LTPVQVQGL--HSVVALEAGSSHSLAVKADGSVWAWGWNTYGQLG-DGTTDSRSTPVQV 176
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
+L ++ ++A G+ S A+ ++G ++ WG QLG+G +
Sbjct: 177 QALD--SVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGSVVS 234
Query: 384 ---------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
L S+G ++A+G +D G+LG + + P+P+ + +I+ G+
Sbjct: 235 VSAGNTFSSALKSDGTVWAWGANDSGQLGSETAAS--NSPSPVQVTGMASAAAISSGSDY 292
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S A+ ++G ++ WG + QLGNG P+++ +L +V+ VA+G H + +
Sbjct: 293 SLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPVQVT--RLG--SVVSVAAGPLHGLAV 346
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 186/414 (44%), Gaps = 79/414 (19%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTP-----LKLESVSGI---------------VKIASG 180
V+AWG R +HG +G E +K P LKL + +G+ V + G
Sbjct: 37 VWAWG--RGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCG 94
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H V+ + ++ G + G+LG T+ + + ++ P +KR +
Sbjct: 95 LFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYK------PYVNP---RIKRVQMASA-G 143
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G++N ++ G++ +G + LG E + P L++ + +++G
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERE-------LLPRLLEGPWKDRIVHVSAGG 196
Query: 301 HHSLALNSEGKIYAFGRHD-YGRLGLKNV----SEPVTEPTPIPSLQDKTITSIACGNCV 355
HS A+ G++Y +GR + GRLG N ++ PT + +L D I S+ CG
Sbjct: 197 SHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFF 255
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKE------------DDI--------------LNSEG 389
+ A+ G L+ WG ++LG+G +D+ L +G
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDG 315
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
K+ +G G+LG + E EP + ++ DKT T IACG + AI G LY WG
Sbjct: 316 KVITWGYGGNGQLGHGTL-ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGK 374
Query: 450 GNGYQLG-NGKEDDILEPMKIEGKQ-LNNYT---VLQVASGGQHSV-ILAKPKP 497
YQLG G +D+ L+P+ ++ Q L+ T VL V+ G H V I+++PKP
Sbjct: 375 NRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPKP 428
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 148/322 (45%), Gaps = 26/322 (8%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V V G H+V E V+ WG D G LG + E + ++ P K+ SAG H
Sbjct: 89 VGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFN-QYKPYVNPRIKRVQMASAGGLH 146
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVM 186
++AL E G VY WG +G+ G G G + L + G IV +++G H
Sbjct: 147 NIALTEVGNVYTWG-----YGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAA 201
Query: 187 LTSRGNLLTAGCPE-QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
+T G L T G E +G+LG A + ++ +VP+ + FT
Sbjct: 202 VTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFT----M 257
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G + ++G N +LG ++ N + P ++ +L D +A G H+ A
Sbjct: 258 ALTKSGQLWSWGGNANHELGHGT----RANN---WKPKVVAALEDVTLVQVACGGFHAAA 310
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +GK+ +G G+LG + E EP + ++ DKT T IACG + AI G L
Sbjct: 311 LTQDGKVITWGYGGNGQLGHGTL-ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369
Query: 366 YGWGMGNGYQLG-NGKEDDILN 386
Y WG YQLG G +D+ L+
Sbjct: 370 YTWGKNRDYQLGIPGLKDEQLD 391
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 155/327 (47%), Gaps = 30/327 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V G+GD G+LG+ + + K + + + V GG+H + LTE G VYTWG
Sbjct: 106 VFVWGKGDGGRLGIDTEFNQYKPY-VNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAF 164
Query: 99 GALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAW----GSFRDSHG 152
GALG + + E +P+ + P K V +SAG SHS A+ E G +Y W G R HG
Sbjct: 165 GALGHGSY-ERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHG 223
Query: 153 SMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+ + EG P K++++ I + G + LT G L + G +LG T+
Sbjct: 224 NPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTR-- 281
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
A+ + ++ LE +V L + G + ++ G ++ +G QLG E
Sbjct: 282 ANNWKPKVVAALE--DVTL----VQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLEN 335
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
K P ++++++DK T +A G + A+ G +Y +G++ +LG+ + +
Sbjct: 336 GKE-------PAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388
Query: 332 VTEPTPI---PSLQDKT---ITSIACG 352
+P + +L +KT + ++CG
Sbjct: 389 QLDPVLVQFPQALHEKTPVEVLGVSCG 415
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 37/247 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED---LDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V T G G G LG G ER+ + + D +V V GG H+ +TE G++YTW
Sbjct: 154 GNVYTWGYGAFGALGHGS--YERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW 211
Query: 94 GCNDEGALGREAEGDSEFIPQ-TVNLPKKA-------VQISAGDSHSVALLEDGTVYAWG 145
G DEG GR G+ + + + ++ P K + G ++AL + G +++WG
Sbjct: 212 G-RDEGE-GRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWSWG 269
Query: 146 SFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ G + + K LE V+ +V++A G H LT G ++T G GQL
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVT-LVQVACGGFHAAALTQDGKVITWGYGGNGQL 328
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-----VFTG-VYNTFISSKGSILAFGL 258
G T LE G+ P + + D + G + I+ G + +G
Sbjct: 329 GHGT--------------LENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGK 374
Query: 259 NNYSQLG 265
N QLG
Sbjct: 375 NRDYQLG 381
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNL 118
K A +ED+ +V+V GG H LT+DGKV TWG G LG E E
Sbjct: 288 KVVAALEDV-TLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMA 346
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH-GSMGLKGEGI------------QKTP 165
K I+ G + + A+ E+G +Y WG RD G GLK E + +KTP
Sbjct: 347 DKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTP 406
Query: 166 LKLESVSGIVKIASGADHFVMLTSR 190
++ ++ ++ GA+H V + SR
Sbjct: 407 VE------VLGVSCGANHGVCIVSR 425
>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1193
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 165/360 (45%), Gaps = 53/360 (14%)
Query: 58 ERKTFA-LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
+RKT+ L ED ++V G +++ + DG VY WG N G LG + S ++P V
Sbjct: 725 DRKTYPDLPEDF-TYMQVSAGDYYSLAVGSDGYVYAWGYNSYGQLGNNSTS-SSYVPVRV 782
Query: 117 NLPK---------KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK 167
P KA+Q+SAGD HS+AL DG YAWG S+G +G P++
Sbjct: 783 RDPASPNDASKGLKAIQVSAGDYHSLALGSDGYAYAWGD--GSYGKLGNNSRSSSYVPVR 840
Query: 168 L-------ESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR- 217
+ ++ G+ ++++G +H + + S G G G+LG + S+S R
Sbjct: 841 VRDPDSPNDASKGLKATQVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRV 900
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY-SQLGEADSEVQKSGN 276
R + LK I + ++ + S G A+GLN+Y QLG S
Sbjct: 901 RDPASPTDTSKGLKAAQISAGYG--HSLAVGSDGYAYAWGLNDYYHQLGNNSSSNSS--- 955
Query: 277 TCFFTPHLIK---SLSDK----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
P ++ S SD K T +++GQ HSLA++ +G YA+G +D G+LG+K
Sbjct: 956 ----VPVRVRDPDSPSDASKGLKATQVSAGQEHSLAVDKDGNAYAWGDNDNGQLGIKGSG 1011
Query: 330 EPVTEPTPIPSLQDKTITS----------IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
P P P+ L TS I G+ S AI ++G WG +LG+G
Sbjct: 1012 RPY--PYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAIGTDGNTKAWGSNRDGRLGDG 1069
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 178/458 (38%), Gaps = 133/458 (29%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA-----------VQISAGD 129
++ + DG Y WG N G LG + P V P + +Q+SAGD
Sbjct: 687 SLAVGSDGNAYAWGSNSYGRLG-DGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGD 745
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
+S+A+ DG VYAWG +S+G +G P+
Sbjct: 746 YYSLAVGSDGYVYAWG--YNSYGQLGNNSTSSSYVPV----------------------- 780
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-IS 248
R+ ++ +A +G+ ++ V G Y++ +
Sbjct: 781 ----------------RVRDPASPNDASKGLKAIQ-------------VSAGDYHSLALG 811
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK---SLSDK----KFTMLASGQH 301
S G A+G +Y +LG + + + P ++ S +D K T +++GQ+
Sbjct: 812 SDGYAYAWGDGSYGKLGN-------NSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQN 864
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEP-----VTEP-TPIPSLQDKTITSIACGNCV 355
HSLA+ S+G YA+G YG+LG + S V +P +P + + I+ G
Sbjct: 865 HSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGH 924
Query: 356 SFAIDSEGVLYGWGMGNGY---------------------------------QLGNGKED 382
S A+ S+G Y WG+ + Y Q+ G+E
Sbjct: 925 SLAVGSDGYAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEH 984
Query: 383 DI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS----------IACG 431
+ ++ +G YA+G +D G+LG+K P P P+ L TS I G
Sbjct: 985 SLAVDKDGNAYAWGDNDNGQLGIKGSGRPY--PYPMKVLSSAQSTSAAGPWMRAVQITAG 1042
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+ S AI ++G WG +LG+G + P+ +
Sbjct: 1043 DHHSLAIGTDGNTKAWGSNRDGRLGDGTTNTKWAPVPV 1080
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML------ 296
++ + S G+ A+G N+Y +LG+ + T TP L+K K + L
Sbjct: 686 FSLAVGSDGNAYAWGSNSYGRLGDGTA-------TQRTTPVLVKKPDRKTYPDLPEDFTY 738
Query: 297 ---ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPI-PSLQDKTITSI 349
++G ++SLA+ S+G +YA+G + YG+LG + S PV P P+ K + +I
Sbjct: 739 MQVSAGDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAI 798
Query: 350 --ACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-----------KEDDILN---------- 386
+ G+ S A+ S+G Y WG G+ +LGN ++ D N
Sbjct: 799 QVSAGDYHSLALGSDGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQ 858
Query: 387 ------------SEGKIYAFGRHDYGRLGLKNVSEP-----VTEP-TPIPSLQDKTITSI 428
S+G YA+G YG+LG + S V +P +P + + I
Sbjct: 859 VSAGQNHSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQI 918
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPMKIE-----GKQLNNYTVLQV 482
+ G S A+ S+G Y WG+ + Y QLGN + P+++ QV
Sbjct: 919 SAGYGHSLAVGSDGYAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQV 978
Query: 483 ASGGQHSVILAK 494
++G +HS+ + K
Sbjct: 979 SAGQEHSLAVDK 990
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPS 340
P ++ ++S+ +FT +++ LA++ +G+++AF G G K+++ +P + T
Sbjct: 279 PIILDTVSNSQFTSISTNDDRLLAVDRQGQVHAF---RTGLTGSKDLNPKPAEQATTGLP 335
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
Q + +T++A + + A+DSEG + W N G K + I G
Sbjct: 336 GQTQAVTAVASDSRI-LALDSEGQAWTWETSN---TGKAKPERIRQDPG 380
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 36/244 (14%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P + SDK TM+AS G+H+ LAL +G +Y++G D GRLG + EP I
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHY-LALTQDGCVYSWGNGDGGRLGHGDTVS-YDEPKLI 193
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN------------ 386
SL DK I IACG+ S A+ + G LY WG GN +LG+G DD+L
Sbjct: 194 ESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTV 253
Query: 387 ----------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ G ++++G DYG+LG + ++ P + L D + + C
Sbjct: 254 VHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG-RGGTDGSKTPKIVDKLLDINVVKVFC 312
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ + G +Y WG G+ Y+LG+G E+ + P IE L + + ++ G H +
Sbjct: 313 GGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES--LRDKKIKDLSVGTTHIL 370
Query: 491 ILAK 494
L +
Sbjct: 371 ALTE 374
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 163/388 (42%), Gaps = 57/388 (14%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLL 194
+ VY WG D GLKG I K P+ E +S + + IA G+ +++ G L
Sbjct: 2587 QQSAVYVWG-LNDKDQLGGLKGSKI-KLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLY 2644
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSK 250
G G+LG + EP +P + + G + ++
Sbjct: 2645 ACGEGTNGRLGLGDDNNVC----------EPKAIPFLSQFVIKKVAVHSGGKHALALTQD 2694
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G +LG + P LI+ L K+ +A G HS A+ S G
Sbjct: 2695 GKVFSWGEGEDGKLGHGNC-------ISLDKPKLIEILKSKRIRDIACGSGHSAAIASNG 2747
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGW 368
++Y +G +YGRLG + T P + +L + + +ACG + + A+ ++G +Y W
Sbjct: 2748 ELYTWGLGEYGRLGHGDTITQ-TRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSW 2806
Query: 369 GMGNGYQLGNGKED--------DILN------------------SEGKIYAFGRHDYGRL 402
G G+ +LG G D D LN G+++ +G+ DY RL
Sbjct: 2807 GDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRL 2866
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
G N V +PT + L+ K I +A G A+ G +Y WG + Q GNG
Sbjct: 2867 GHGN-DHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSV 2925
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+P + L + V +V+ G HS+
Sbjct: 2926 NRKPSLVH--DLEDARVNRVSCGSSHSI 2951
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 45/280 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++ G + ++G + +LG D+ + P LI+SL DK +A G
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHGDT-------VSYDEPKLIESLLDKNIVFIACGS 208
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 358
+S AL++ G++Y +GR +YGRLG N + +T PT + +L+ T+ +ACG + +
Sbjct: 209 TYSAALSASGELYTWGRGNYGRLGHGNFDDVLT-PTLVTTLKGHTVVHVACGSGDSQTLC 267
Query: 359 IDSEGVLYGWGMGNGYQLGNGKED------------DI--------------LNSEGKIY 392
+ + G+++ WG G+ +LG G D DI L + G++Y
Sbjct: 268 VTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVY 327
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+G+ D RLG E V P I SL+DK I ++ G A+ + +YGWG N
Sbjct: 328 TWGKGDAYRLG-HGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGR-ND 385
Query: 453 YQLGNGKEDDILEPMKIEGK---QLNNYTVLQVASGGQHS 489
Y G+ D L P+ E L++ TV+ +ASG S
Sbjct: 386 Y----GQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQS 421
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 42/346 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFALVED-LDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D V E K + + V V GG H + LT
Sbjct: 2633 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALT 2692
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYA 143
+DGKV++WG ++G LG S P+ + + K+ I+ G HS A+ +G +Y
Sbjct: 2693 QDGKVFSWGEGEDGKLG-HGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYT 2751
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCP 199
WG +G +G Q P ++++ G +V++A G+ + LT+ G + + G
Sbjct: 2752 WG--LGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDG 2809
Query: 200 EQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
+ G+LGR T + R G+ +E G ++ ++ G +
Sbjct: 2810 DFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECG--------------AQFSLALTKYGEV 2855
Query: 254 LAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+G +Y +LG D V+K P L++ L KK +A G H LA+ G++
Sbjct: 2856 WTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 2907
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
YA+G +D+G+ G + +P+ + L+D + ++CG+ S A
Sbjct: 2908 YAWGDNDHGQQG-NGATSVNRKPSLVHDLEDARVNRVSCGSSHSIA 2952
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 141/290 (48%), Gaps = 31/290 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSV 133
G H + LT+DG VY+WG D G LG GD+ P+ + L K V I+ G ++S
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLG---HGDTVSYDEPKLIESLLDKNIVFIACGSTYSA 212
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTS 189
AL G +Y WG R ++G +G TP + ++ G +V +A SG + +T+
Sbjct: 213 ALSASGELYTWG--RGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 270
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFIS 248
G + + G + G+LGR S+ + L+ V VF G ++ ++
Sbjct: 271 SGIVFSWGDGDYGKLGR-GGTDGSKTPKIVDKLLDINVV--------KVFCGGQFSAALT 321
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G + +G + +LG E + P +I+SL DKK L+ G H LAL
Sbjct: 322 AHGEVYTWGKGDAYRLGHGSEEHVR-------YPKVIESLRDKKIKDLSVGTTHILALTE 374
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ +Y +GR+DYG++ + V+EPT P+L KT+ +A G SFA
Sbjct: 375 DQFVYGWGRNDYGQID-PTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFA 423
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 169/406 (41%), Gaps = 76/406 (18%)
Query: 75 VVGGMHTV-CLTEDGKVYTWGCNDEGALGREAEGDS------EFIPQTVNLPKKAVQISA 127
+ GG T+ ++++GK+Y G EG GR GD + IP K V + +
Sbjct: 2627 IAGGSKTLFIVSQEGKLYACG---EGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHS 2683
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHF 184
G H++AL +DG V++WG D G +G G I KL + I IA G+ H
Sbjct: 2684 GGKHALALTQDGKVFSWGEGED--GKLG-HGNCISLDKPKLIEILKSKRIRDIACGSGHS 2740
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVY 243
+ S G L T G E G+LG + +R P V L + + V G
Sbjct: 2741 AAIASNGELYTWGLGEYGRLGHGDTITQTR----------PKLVQALVGQRVVQVACGSR 2790
Query: 244 NT---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+ +++ G + ++G ++ +LG + G+ +TP + L+ + G
Sbjct: 2791 DAQTMALTTDGCVYSWGDGDFGKLG-------RGGSDGCYTPLAVDRLNGLGVIQVECGA 2843
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
SLAL G+++ +G+ DY RLG N V +PT + L+ K I +A G A+
Sbjct: 2844 QFSLALTKYGEVWTWGKGDYFRLGHGN-DHHVRKPTLVEGLRGKKIIHVAVGALHCLAVT 2902
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G +Y WG + Q GNG + +P+ + L
Sbjct: 2903 DTGQVYAWGDNDHGQQGNG---------------------------ATSVNRKPSLVHDL 2935
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+D + ++CG+ S A W + + Q NG +D + P
Sbjct: 2936 EDARVNRVSCGSSHSIA---------WVLVD--QPSNGNQDPVTFP 2970
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 141/328 (42%), Gaps = 59/328 (17%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESV--SG 173
P + A H +AL +DG VY+WG +G G G G + P +ES+
Sbjct: 146 PITMIASHADGKHYLALTQDGCVYSWG-----NGDGGRLGHGDTVSYDEPKLIESLLDKN 200
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
IV IA G+ + L++ G L T G +G GR+ + L P V +
Sbjct: 201 IVFIACGSTYSAALSASGELYTWG---RGNYGRLGHGNFD-------DVLTPTLVTTLKG 250
Query: 234 H-IDDVFTGVYNT---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
H + V G ++ +++ G + ++G +Y +LG ++ K TP ++ L
Sbjct: 251 HTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSK-------TPKIVDKLL 303
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
D + G S AL + G++Y +G+ D RLG E V P I SL+DK I +
Sbjct: 304 DINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLG-HGSEEHVRYPKVIESLRDKKIKDL 362
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
+ G A+ + +YGW GR+DYG++ +
Sbjct: 363 SVGTTHILALTEDQFVYGW--------------------------GRNDYGQID-PTLGP 395
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA 437
V+EPT P+L KT+ +A G SFA
Sbjct: 396 VVSEPTLCPTLSSKTVIGLASGPTQSFA 423
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 120/285 (42%), Gaps = 37/285 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D + L+E L N+V + G ++ L+ G++Y
Sbjct: 163 TQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIESLLDKNIVFIACGSTYSAALSASGELY 221
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSF 147
TWG + G LG D P V K V +GDS ++ + G V++WG
Sbjct: 222 TWGRGNYGRLG-HGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGD- 279
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G KTP ++ + I VK+ G LT+ G + T G + +LG
Sbjct: 280 -GDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLG 338
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ- 263
S R +E L+ K I D+ G + ++ + +G N+Y Q
Sbjct: 339 H-----GSEEHVRYPKVIE----SLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389
Query: 264 ---LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
LG SE P L +LS K LASG S A
Sbjct: 390 DPTLGPVVSE-----------PTLCPTLSSKTVIGLASGPTQSFA 423
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G GD G+LG G KT +V+ L NVV+V GG + LT G+
Sbjct: 267 CVTASGIVFSWGDGDYGKLGRG-GTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGE 325
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
VYTWG D LG +E + +L K ++ +S G +H +AL ED VY WG R
Sbjct: 326 VYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWG--R 383
Query: 149 DSHGSM 154
+ +G +
Sbjct: 384 NDYGQI 389
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 177/412 (42%), Gaps = 54/412 (13%)
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAW 144
+ VY WG ND+ LG + + L K K V I+ G + ++G +YA
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPEQG 202
G + +G + P+ S I K+A SG H + LT G + + G E G
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907
Query: 203 QLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
+LG +S +P + LK K I D+ G ++ I+S G + +GL
Sbjct: 2908 KLGH----------GNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGE 2957
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D+ Q P L++SL ++ +A G ++AL ++G +Y++G
Sbjct: 2958 YGRLGHGDTATQSK-------PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + S+ P I L + I CG S A+ G ++ WG G+ ++LG+
Sbjct: 3011 DFGKLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH 3069
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
G + V +PT + L+ K I +A G A+
Sbjct: 3070 GNDHH---------------------------VRKPTLVEGLRGKKIIHVAVGALHCLAV 3102
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P + +L++ V +V+ G HS+
Sbjct: 3103 TDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVH--ELDDARVNRVSCGSSHSI 3152
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 171/397 (43%), Gaps = 67/397 (16%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P+ ES+S + V++ G +T+ G +
Sbjct: 3784 GAIYGWG--HNHRGQLGGLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3840
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G +GR+ G+ + VP + I VF G + +
Sbjct: 3841 TG---YGAVGRL-----------GIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL 3886
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P LI+ L + +A G HHS A+
Sbjct: 3887 SSEGHVYSWGEGDDGKLGHGN-------RLSYDRPKLIEELLGTEIVDIACGGHHSAAIT 3939
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + + +T P I +LQD + +ACG + + + + +
Sbjct: 3940 SAGWLYTWGKGRYGRLGHGDSEDQLT-PKLIEALQDYKVIDVACGSGDAQTLCVTDDDNV 3998
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G IY +G+ DY
Sbjct: 3999 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4058
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4059 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGT 4117
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + L + +VA G H++ + K
Sbjct: 4118 TSALQRPRLVHA--LQGKKITRVACGSAHTLAWSTMK 4152
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 180/417 (43%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K L E L + V + GG T+ +T DGKVY
Sbjct: 3782 GSGAIYGWGHNHRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3840
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GA+GR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 3841 TG---YGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 3897
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G P +E + G IV IA G H +TS G L T G +G+
Sbjct: 3898 GDD--GKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG---KGRY 3952
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + L P + L+ + DV G ++ ++ ++G +
Sbjct: 3953 GRLGHGDSEDQ-------LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4005
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I+SL+ + G S+AL G IY +G+ DY
Sbjct: 4006 YGKLGRGGSDGCK-------IPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4058
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4059 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG- 4116
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K IT +ACG+ + A
Sbjct: 4117 --------------------------TTSALQRPRLVHALQGKKITRVACGSAHTLA 4147
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 48/349 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D V E K L + + V V GG H + LT
Sbjct: 2834 TLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALT 2893
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFI--PQTV-NLPKKAVQ-ISAGDSHSVALLEDGTV 141
+DGKV++WG ++G LG G+S + P+ + +L K ++ I+ G HS A+ G +
Sbjct: 2894 QDGKVFSWGEGEDGKLG---HGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAG 197
Y WG +G +G Q P ++S+ G +++IA G+ + LT+ G + + G
Sbjct: 2951 YTWG--LGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWG 3008
Query: 198 CPEQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
+ G+LGR T R G+ +E G ++ ++ G
Sbjct: 3009 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECG--------------AQFSLALTKYG 3054
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ +G +Y +LG D V+K P L++ L KK +A G H LA+ G
Sbjct: 3055 EVWTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKIIHVAVGALHCLAVTDIG 3106
Query: 311 KIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
++YA+G +D+G+ G N + V +P+ + L D + ++CG+ S A
Sbjct: 3107 QVYAWGDNDHGQQG--NGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3153
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 164/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V G G G+LG+G P ++E V+ V V GG H
Sbjct: 3828 TLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKK----VAVNSGGKHC 3883
Query: 82 VCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ L+ +G VY+WG D+G LG R + + I + L + V I+ G HS A+
Sbjct: 3884 LALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACGGHHSAAITSA 3941
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLL 194
G +Y WG R +G +G Q TP +E++ ++ +A SG + +T N+
Sbjct: 3942 GWLYTWGKGR--YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVW 3999
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTF 246
+ G + G+LG RG S + ++P+K + + + GV ++
Sbjct: 4000 SWGDGDYGKLG------------RGGS--DGCKIPMKIESLAGL--GVIKVECGSQFSVA 4043
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G+I +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4044 LTRSGAIYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4095
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4096 CTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4147
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 39/251 (15%)
Query: 247 ISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+S +G + A G +LG D S V + F + ++IK ++ + SG H+LA
Sbjct: 2838 VSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVA------VHSGGKHALA 2891
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +GK++++G + G+LG N S + +P I SL+ K I IACG+ S AI S G L
Sbjct: 2892 LTQDGKVFSWGEGEDGKLGHGN-SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
Y WG+G +YGRLG + + ++P + SL + +
Sbjct: 2951 YTWGLG--------------------------EYGRLGHGDTATQ-SKPKLVQSLVGQRV 2983
Query: 426 TSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
IACG + + A+ ++G++Y WG G+ +LG G D P+ I+ +LN V+Q+
Sbjct: 2984 IQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLID--RLNGLGVVQIE 3041
Query: 484 SGGQHSVILAK 494
G Q S+ L K
Sbjct: 3042 CGAQFSLALTK 3052
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 288 LSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
S+K TM+AS H LAL + +Y++G + GRLG N++ EP I +L +K
Sbjct: 497 FSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTW-YDEPKLIEALVEKN 555
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DIL------------------- 385
IT IACG+ S A+ S G LY WG GN +LG+G D D++
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACG 615
Query: 386 ----------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
+ G ++++G ++G+LG T P + L D + + CG S
Sbjct: 616 GGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKT-PKIVDKLLDINVAKVYCGQQFS 674
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
A+ + G +Y WG G Y+LG+G ED + P I+
Sbjct: 675 AALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIID 709
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 53/298 (17%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL-EPGEV-P 229
I IAS +D H++ LT ++ + G E G+LG M++ EP +
Sbjct: 502 ITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGH-----------GNMTWYDEPKLIEA 550
Query: 230 LKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
L K+I + G Y+ +SS G + +G NY +LG +S+ P L+ +L
Sbjct: 551 LVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKD------VMIPTLVTAL 604
Query: 289 SDKKFTMLASG---QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
+ +A G +L + + G ++++G ++G+LG T P + L D
Sbjct: 605 NGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKT-PKIVDKLLDIN 663
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG S A+ + G +Y WG G Y+LG+G ED +
Sbjct: 664 VAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGH 723
Query: 385 -----LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +Y +GR+D+G++ + V EPT P+ K + +ACG SFA
Sbjct: 724 LHVLALTEDQLVYGWGRNDHGQID-PALGTIVPEPTLCPTFSGKNVIGLACGPTQSFA 780
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 35/338 (10%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C T V++ G+ + G + ++ + E ++ G H + LT+D VY
Sbjct: 467 CCTERAVIILSVNGNVYMMYYGSET--QRVYGFSEKPITMIASHSDGTHYLALTQDNSVY 524
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
+WG G GR G+ + P+ + + K I+ G ++S AL +G +Y WG
Sbjct: 525 SWG---NGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWG-- 579
Query: 148 RDSHGSMGL-KGEGIQKTPLKLESVSG--IVKIASGA---DHFVMLTSRGNLLTAGCPEQ 201
R ++G +G + P + +++G +V +A G + +T+ G + + G
Sbjct: 580 RGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNH 639
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNN 260
G+LGR S+ + L+ ++ V+ G ++ +++ G + +G
Sbjct: 640 GKLGR-GGCDGSKTPKIVDKLLD--------INVAKVYCGQQFSAALTAYGEVYTWGKGE 690
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+LG + + + P +I L KK L G H LAL + +Y +GR+D+
Sbjct: 691 DYKLGHGNEDHVR-------YPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDH 743
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G++ + V EPT P+ K + +ACG SFA
Sbjct: 744 GQID-PALGTIVPEPTLCPTFSGKNVIGLACGPTQSFA 780
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 109/262 (41%), Gaps = 39/262 (14%)
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPH-LIKSLSDKKFTMLASGQHHS--LALNSEGKI 312
F L Q+ E ++ K GNT H L K D++ + + L+ + G I
Sbjct: 3729 FCLEVTKQINEMITD--KEGNTKDHENHELFKQEHDEQLLQWLNRRPEDWMLSWDGSGAI 3786
Query: 313 YAFGRHDYGRL-GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
Y +G + G+L GL+ V P SL + G FA+ ++G +Y G G
Sbjct: 3787 YGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYG 3844
Query: 372 NGYQLGNGKEDDI----------------------------LNSEGKIYAFGRHDYGRLG 403
+LG G D + L+SEG +Y++G D G+LG
Sbjct: 3845 AVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLG 3904
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
N P I L I IACG S AI S G LY WG G +LG+G +D
Sbjct: 3905 HGN-RLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 3963
Query: 464 LEPMKIEGKQLNNYTVLQVASG 485
L P IE L +Y V+ VA G
Sbjct: 3964 LTPKLIEA--LQDYKVIDVACG 3983
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLT 85
P C T G+V + G G+ G+LG G KT +V+ L NV +V G + LT
Sbjct: 620 PQTLCVTASGIVFSWGDGNHGKLGRG-GCDGSKTPKIVDKLLDINVAKVYCGQQFSAALT 678
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYA 143
G+VYTWG ++ LG E + P+ +++ KK + G H +AL ED VY
Sbjct: 679 AYGEVYTWGKGEDYKLGHGNEDHVRY-PKIIDILKTKKIKDLYIGHLHVLALTEDQLVYG 737
Query: 144 WGSFRDSHGSM 154
WG R+ HG +
Sbjct: 738 WG--RNDHGQI 746
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 357 FAIDSEGVLYGWGMGNGYQLG------------------------NGKEDDI--LNSEGK 390
+ D G +YGWG + QLG G E + + ++GK
Sbjct: 3778 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGK 3837
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGWG 448
+YA G GRLG+ ++ V PT + S+Q + +A G A+ SEG +Y WG
Sbjct: 3838 VYATGYGAVGRLGIGG-TDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 3896
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G+ +LG+G P IE +L ++ +A GG HS +
Sbjct: 3897 EGDDGKLGHGNRLSYDRPKLIE--ELLGTEIVDIACGGHHSAAI 3938
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 376 LGNGKEDDILNSEGK--IYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L ED +L+ +G IY +G + G+LG L+ V P SL + G
Sbjct: 3769 LNRRPEDWMLSWDGSGAIYGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGE 3826
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
FA+ ++G +Y G G +LG G D ++ P +E Q + V SGG+H + L
Sbjct: 3827 QTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL 3886
Query: 493 A 493
+
Sbjct: 3887 S 3887
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 170/375 (45%), Gaps = 37/375 (9%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHFVMLTSRGNLL 194
+ G + +WG+ +S G +G G Q PL +ES+S + VK +A+G H + LT G +
Sbjct: 565 QTGLILSWGA--NSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTENGEVT 622
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNT-FISSKG 251
+ G +QGQ G+ + A + ++ P +P L++K + + G Y++ +++ G
Sbjct: 623 SFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADG 682
Query: 252 SILAFGLNNYSQLGE-----------ADSEVQKSGNTCFFTPH--LIKSLSDKKFTMLAS 298
+ FG QLG A S T +F P + +L+ + +A
Sbjct: 683 ELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVAC 742
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G+ HS + EG +Y +GR G+LG ++++ T ++DK + +ACG S A
Sbjct: 743 GRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSAA 802
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPI 417
+DS GV+Y G QLG G E + H G G + E + I
Sbjct: 803 VDSAGVIYTTGGDESGQLGKGDE----------WICATHGEGCTGSGWSCQERIPTFLSI 852
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
S++ IACG+ AI + G+LY WG G LG G D+ EP +
Sbjct: 853 LSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTA--LGLGPSGDVSEPTHLSSID---- 906
Query: 478 TVLQVASGGQHSVIL 492
V+ VA G H+ L
Sbjct: 907 GVVSVACGDIHAAAL 921
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 179/396 (45%), Gaps = 64/396 (16%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV-VEVVVGG-MHTVCLTEDGKV 90
K G++L+ G G LG + + A +E L +V V++V G H++CLTE+G+V
Sbjct: 563 KEQTGLILSWGANSDGVLGHTGGIEQLWPLA-IESLSSVQVKMVAAGEFHSLCLTENGEV 621
Query: 91 YTWGCNDEGALGREAEGDSE-------FIPQTVNLP-----KKAVQISAGDSHSVALLED 138
++G ND+G G+ +E P+ + LP K V I+AG HS + D
Sbjct: 622 TSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTAD 681
Query: 139 GTVYAW---GSFRDSHGSMGLKGEG---------------IQKTPLKLESVSGIV--KIA 178
G +Y + G F+ H ++ GEG Q P +L +++G V ++A
Sbjct: 682 GELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVA 741
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGR--ITQRSASRNARRGMSFLEPGEVPLKRKHID 236
G H +T G L T G GQLG +T ++ + G +K K +
Sbjct: 742 CGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAG----------IKDKIMV 791
Query: 237 DVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEV--------QKSGNTC-FFTPHLIK 286
V G ++ + S G I G + QLG+ D + SG +C P +
Sbjct: 792 KVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLS 851
Query: 287 SLSDK--KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
LS + +F +A G A+ + G +Y +G+ LG S V+EPT + S+
Sbjct: 852 ILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLG---PSGDVSEPTHLSSIDG- 907
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+ S+ACG+ + A+ +G LY WG +LG+G+
Sbjct: 908 -VVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGR 942
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVED--LDNV-VEVVVGGMHTVCLTEDG 88
C T G + T G+G GQLG G D+ ++ T VE D + V+V G H+ + G
Sbjct: 749 CVTEEGALYTWGRGANGQLGHG-DMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAG 807
Query: 89 KVYTWGCNDEGALGR--------EAEGDS-------EFIPQTVNLPK----KAVQISAGD 129
+YT G ++ G LG+ EG + E IP +++ + V I+ G
Sbjct: 808 VIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGH 867
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
A+ G +Y WG ++GL G P L S+ G+V +A G H LT
Sbjct: 868 GFCAAITNRGLLYTWGK----GTALGLGPSGDVSEPTHLSSIDGVVSVACGDIHAAALTD 923
Query: 190 RGNLLTAGCPEQGQLG 205
+G L G E G+LG
Sbjct: 924 KGQLYMWGSSEAGRLG 939
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 58/270 (21%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL---PKKAVQISA 127
V +V G H+ C+TE+G +YTWG G LG D + P+ V K V+++
Sbjct: 737 VKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTD-QATPKRVEAGIKDKIMVKVAC 795
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI----------------QKTPLKLESV 171
G++HS A+ G +Y G D G +G E I ++ P L +
Sbjct: 796 GENHSAAVDSAGVIYTTGG--DESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSIL 853
Query: 172 S----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
S V IA G +T+RG L T G LG G+
Sbjct: 854 SVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLG------------------PSGD 895
Query: 228 V--PLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
V P ID V + ++ ++ KG + +G + +LG+ +S T
Sbjct: 896 VSEPTHLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDG-----RSTEGVTRT 950
Query: 282 PHLIKSLSD---KKFTMLASGQHHSLALNS 308
P L+ + +D + ++ G H+LA++S
Sbjct: 951 PKLVPAFADIHQARCLGVSIGPRHALAISS 980
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 28/138 (20%)
Query: 385 LNSEGKIYAFGRHDYGRLG--LKNVSE-----PVTEPTPI---PSLQDKTITSIACGNCV 434
L G++ +FG +D G+ G + ++E V P PI L+ KT+ SIA G
Sbjct: 615 LTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYH 674
Query: 435 SFAIDSEGVLYGWGMGNGYQLG------------------NGKEDDILEPMKIEGKQLNN 476
S + ++G LY +G G +QLG N + +P LN
Sbjct: 675 SALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNG 734
Query: 477 YTVLQVASGGQHSVILAK 494
V QVA G HS + +
Sbjct: 735 QVVKQVACGRFHSACVTE 752
>gi|430376867|ref|ZP_19431000.1| regulator of chromosome condensation [Moraxella macacae 0408225]
gi|429540004|gb|ELA08033.1| regulator of chromosome condensation [Moraxella macacae 0408225]
Length = 622
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 185/437 (42%), Gaps = 77/437 (17%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALG-----REAEGDSEFIPQTVN-LPKKAVQISA 127
+ GG HT + DGKVY WG N+ G +G + D P + P AV IS
Sbjct: 224 LAAGGSHTGAIV-DGKVYAWGRNNLGQVGMGKTTSLKDTDHSTRPYLITQAPNNAVSISF 282
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-------IQKTPLKLESVSG---IVKI 177
+HS L +DG VY WG D +G +G G + L + +V G ++ I
Sbjct: 283 SQNHSALLTKDGKVYTWGD--DENGELGRGDSGRTICTDKVANCRLTIGAVDGLNDVISI 340
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHID 236
ASG H + LT G + G QGQLG+ ++ +++S+ + + + G++ D
Sbjct: 341 ASGYAHRLALTKSGEVWAFGSNSQGQLGQNVSVKNSSKPVKVNFNNVNVGKIIQVIASAD 400
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLG------EADSEVQKSGNTCFFTPHLIKSLSD 290
+ + +KG + A+G N Y LG E D + + TP + SD
Sbjct: 401 TSYA------LDNKGQVWAWGSNQYGNLGNDKICDENDKTLTPNCLVNSSTPLFVPFASD 454
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL---------KNVSEPVTEPTPIPSL 341
K + LA+G+ H LA+ +G++YA+G + ++G K +E + +PT +P
Sbjct: 455 VKISELAAGRDHLLAMTDKGQVYAWGLNFSSQVGYHGEGYVYTNKEWAENIGKPTLLPWS 514
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR 401
KT I S+ + + + WG+ G+ A G DY
Sbjct: 515 TKKTAKHIYANGNTSYVMFNNHTIQPWGL-----------------FGETDALGITDYLD 557
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG------MGNGYQL 455
L EPT L + T+T +A G A D G + WG +G+G L
Sbjct: 558 LN---------EPT--DKLANLTVTDMAVGALHQVAKDKNGGVLTWGWSFEGSLGDGATL 606
Query: 456 GNGKEDDILEPMKIEGK 472
N + + P+K+ K
Sbjct: 607 ANTRMYN--TPIKVSIK 621
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 157/380 (41%), Gaps = 42/380 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKT------FALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
G V G+ + GQ+G+G + T + + + +N V + H+ LT+DGKV
Sbjct: 237 GKVYAWGRNNLGQVGMGKTTSLKDTDHSTRPYLITQAPNNAVSISFSQNHSALLTKDGKV 296
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLP---------KKAVQISAGDSHSVALLEDGTV 141
YTWG ++ G LGR G + + N + I++G +H +AL + G V
Sbjct: 297 YTWGDDENGELGRGDSGRTICTDKVANCRLTIGAVDGLNDVISIASGYAHRLALTKSGEV 356
Query: 142 YAWGSFRDSHGSMG----LKGEGIQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLLTA 196
+A+GS +S G +G +K G I+++ + AD L ++G +
Sbjct: 357 WAFGS--NSQGQLGQNVSVKNSSKPVKVNFNNVNVGKIIQVIASADTSYALDNKGQVWAW 414
Query: 197 GCPEQGQLGRI-----TQRSASRNARRGMSFLEPGEVPLKRK-HIDDVFTGVYNTF-ISS 249
G + G LG ++ + N S P VP I ++ G + ++
Sbjct: 415 GSNQYGNLGNDKICDENDKTLTPNCLVNSS--TPLFVPFASDVKISELAAGRDHLLAMTD 472
Query: 250 KGSILAFGLNNYSQL---GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
KG + A+GLN SQ+ GE K P L+ + K + + + S +
Sbjct: 473 KGQVYAWGLNFSSQVGYHGEGYVYTNKEWAENIGKPTLLPWSTKKTAKHIYANGNTSYVM 532
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+ I +G +G +++ + P L + T+T +A G A D G +
Sbjct: 533 FNNHTIQPWGL--FGETDALGITDYLDLNEPTDKLANLTVTDMAVGALHQVAKDKNGGVL 590
Query: 367 GWG------MGNGYQLGNGK 380
WG +G+G L N +
Sbjct: 591 TWGWSFEGSLGDGATLANTR 610
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 169/360 (46%), Gaps = 40/360 (11%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG- 99
GQ G+LGLG D +ER T L + ++V V G T LT G+VY+ G N EG
Sbjct: 17 GQNACGELGLG-DTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQ 75
Query: 100 -ALGREAEGDSEFIPQTVNLPKKA-----------VQISAGDSHSVALLEDGTVYAWG-- 145
+G E E +P + + V G H V + E+G + G
Sbjct: 76 CGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRN 135
Query: 146 -SFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
S + HG +G KG + + P+ + + K+A H V++T T G GQL
Sbjct: 136 NSGQLGHGEVG-KGYSLPR-PVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQL 193
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS-SKGSILAFGLNNYSQ 263
G +SR+A ++ + + V GVY+T +S + G + +FG N++ Q
Sbjct: 194 GHGDH--SSRSAPAALACFQG-------LGVLSVACGVYHTVVSVASGGLYSFGKNDHGQ 244
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG E + FTP ++ + LA G +H++AL+ G++ AFGR+DYG+L
Sbjct: 245 LGLEGGESR-------FTPVQHRACT-SVVEQLACGYYHTVALSRAGEVVAFGRNDYGQL 296
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL + E + +P L I +ACG+ + ++D EG +Y +G N QLG G +D
Sbjct: 297 GLGH-RESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTRED 355
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 185/431 (42%), Gaps = 74/431 (17%)
Query: 86 EDGKVYTWGCNDEG--ALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
++ ++Y +G N G LG E + + QT + K V ++AG+ + L G VY+
Sbjct: 9 QERELYGFGQNACGELGLGDTLERHTPTLSQT-SRGKDIVGVTAGNELTAVLTNTGEVYS 67
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS---------------GIVKIASGADHFVMLT 188
G +S G G+ GE + P + S++ +V +G++H V++T
Sbjct: 68 CG--YNSEGQCGI-GEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVT 124
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
G L T G GQLG +G S P + + + ++
Sbjct: 125 EEGELQTCGRNNSGQLGH-------GEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVT 177
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
FG N Y QLG D + + P + +A G +H++ +
Sbjct: 178 DDDRTWTFGGNGYGQLGHGDHSSRSA-------PAALACFQGLGVLSVACGVYHTVVSVA 230
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI----ACGNCVSFAIDSEGV 364
G +Y+FG++D+G+LGL+ + TP+ Q + TS+ ACG + A
Sbjct: 231 SGGLYSFGKNDHGQLGLEGGE---SRFTPV---QHRACTSVVEQLACGYYHTVA------ 278
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
L+ G++ AFGR+DYG+LGL + E + +P L
Sbjct: 279 --------------------LSRAGEVVAFGRNDYGQLGLGH-RESTWQGGQVPDLAGLR 317
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I +ACG+ + ++D EG +Y +G N QLG G +D P +EG L+ V QVA+
Sbjct: 318 IIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEG--LSQSFVCQVAA 375
Query: 485 GGQHSVILAKP 495
G H++ L P
Sbjct: 376 GFYHTLCLTGP 386
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 38/337 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG------PDVMERKTFALVEDLD-------NVVEVVVGGMH 80
T G V +CG GQ G+G P+++ T + + ++V G H
Sbjct: 60 TNTGEVYSCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEH 119
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLED 138
V +TE+G++ T G N+ G LG G +P+ V + +++ SH+V + +D
Sbjct: 120 LVVVTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDD 179
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTA 196
+ +G + +G +G + P L G++ +A G H V+ + G L +
Sbjct: 180 DRTWTFGG--NGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSF 237
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG G S P + ++ + G Y+T +S G ++A
Sbjct: 238 GKNDHGQLG----------LEGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGEVVA 287
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
FG N+Y QLG E G + L+ + +A G +H+++L+ EG++Y F
Sbjct: 288 FGRNDYGQLGLGHRESTWQGGQ-------VPDLAGLRIIQVACGSYHTISLDDEGRVYPF 340
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
GR+++G+LG E P + L + +A G
Sbjct: 341 GRNNHGQLG-TGTREDACRPCFVEGLSQSFVCQVAAG 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 62/355 (17%)
Query: 4 LLKKVLRKQAENPSQKVFV--TSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKT 61
L K LR+ + P+ +V + + L T G + TCG+ ++GQLG G K
Sbjct: 92 LTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGE---VGKG 148
Query: 62 FALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
++L + V +V HTV +T+D + +T+G N G LG + S P +
Sbjct: 149 YSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLG-HGDHSSRSAPAAL 207
Query: 117 NLPKK--AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
+ + ++ G H+V + G +Y++G ++ HG +GL+G + TP++ + + +
Sbjct: 208 ACFQGLGVLSVACGVYHTVVSVASGGLYSFG--KNDHGQLGLEGGESRFTPVQHRACTSV 265
Query: 175 V-KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
V ++A G H V L+ G ++ G + GQLG + R ++ + G+VP L
Sbjct: 266 VEQLACGYYHTVALSRAGEVVAFGRNDYGQLG-LGHREST---------WQGGQVPDLAG 315
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSE--------------------- 270
I V G Y+T + +G + FG NN+ QLG E
Sbjct: 316 LRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAA 375
Query: 271 -------------VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+K+G+ F KSLS + +L + + EGK+
Sbjct: 376 GFYHTLCLTGPPLERKAGHGSAFVVRDSKSLSSDLYRLLNNPSQSDVTFTVEGKV 430
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 184/410 (44%), Gaps = 59/410 (14%)
Query: 1 MTHLLKKVLRKQAENPSQKVFVTSE--AVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVME 58
+ H +R+ + + S + +E AV T++ +L+ G+G +GQLG G + M
Sbjct: 4 LGHRCASFMRRMSTSVSAPLLWKAENDAVTTVQ-------LLSWGRGASGQLGGGIEEMR 56
Query: 59 ----------------------RKTFALVEDLDNVVEV-VVGGMHTVCLTEDGKVYTWGC 95
R VE+ + EV + G+ L DGK++ WG
Sbjct: 57 LYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVVDGKLWIWGK 116
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISA-GDSHSVALLEDGTVYAWGSFRDSHGSM 154
D G LG E + F+P T+N +++ +A G HSVAL G V+ WG +G
Sbjct: 117 GDGGRLGFGQEYPA-FLP-TLNPNLDSIRSTALGGVHSVALSSLGQVFTWG-----YGGF 169
Query: 155 GLKGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI-T 208
G G + L V G I IA+ H +T G L T G +QG GR+
Sbjct: 170 GALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWG-RDQGD-GRLGL 227
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEA 267
+ N G+S P +V + V G + T + + +G + +G N+ +LG
Sbjct: 228 GPNCGPNEGGGLSI--PSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRG 285
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
D K G + P I SL D + +ASG +HSLAL +GK+ ++G +G+LG +
Sbjct: 286 D----KVGG---WKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSS 338
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ E PT I +L D+ + IACG S AI G LY WG QLG
Sbjct: 339 I-ENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLG 387
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 150/317 (47%), Gaps = 41/317 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTF--ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G + G+GD G+LG G E F L +LD++ +GG+H+V L+ G+V+TWG
Sbjct: 109 GKLWIWGKGDGGRLGFG---QEYPAFLPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWG 165
Query: 95 CNDEGALGREAEGDSEFIPQTV--NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS-H 151
GALG E +P+ V + K I+ +H+ A+ E G +Y WG RD
Sbjct: 166 YGGFGALGHSVY-HRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWG--RDQGD 222
Query: 152 GSMGL-------KGEGIQKTPLKLESVSGIVKIASGADHFVM-LTSRGNLLTAGCPEQGQ 203
G +GL +G G+ P K++++ V S F M LT G L G +
Sbjct: 223 GRLGLGPNCGPNEGGGL-SIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYE 281
Query: 204 LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
LGR + + P +P L+ I + +G Y++ ++ G +L++G +
Sbjct: 282 LGRGDKVGGWK----------PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 331
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG + E QK P +I++L+D+ +A G S A+ GK+Y +G
Sbjct: 332 GQLGHSSIENQK-------IPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDS 384
Query: 322 RLGLKNVSEPVTEPTPI 338
+LG+ + P T+P P+
Sbjct: 385 QLGVPGL--PETQPLPV 399
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 52/318 (16%)
Query: 217 RRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
R G P +P ++D + GV++ +SS G + +G + LG + +
Sbjct: 121 RLGFGQEYPAFLPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRE 180
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR-HDYGRLGLKNVSEP 331
P +++ + K +A+ H+ A+ G++Y +GR GRLGL P
Sbjct: 181 -------LLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGP 233
Query: 332 -----VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE----- 381
++ P+ + +L + +++CG + + EG L+ WG + Y+LG G +
Sbjct: 234 NEGGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWK 292
Query: 382 -------DDI--------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
D+ L +GK+ ++G +G+LG ++ E PT I +L
Sbjct: 293 PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI-ENQKIPTVIEAL 351
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK------QL 474
D+ + IACG S AI G LY WG QLG + +P+ +E K +L
Sbjct: 352 ADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPET-QPLPVEVKFLMEDDRL 410
Query: 475 NNYTVLQVASGGQHSVIL 492
+ VL VA G H++ L
Sbjct: 411 GPHNVLSVAVGASHAMCL 428
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAG 128
++++ GG H++ LT+DGKV +WG G LG + +++ IP + + + I+ G
Sbjct: 304 IIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI-ENQKIPTVIEALADEHVIYIACG 362
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESV--------SGIVKIAS 179
S S A+ ++G +Y WG+ +DS +G+ G Q P++++ + ++ +A
Sbjct: 363 GSSSAAITDNGKLYMWGNAKDSQ--LGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAV 420
Query: 180 GADHFVMLTS 189
GA H + L S
Sbjct: 421 GASHAMCLVS 430
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 145/549 (26%), Positives = 231/549 (42%), Gaps = 101/549 (18%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD- 69
K +P ++ A ++ C T G + T G G G+LGLG + + LD
Sbjct: 246 KVRADPVVVTCCSAGAKHSMAC-TSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDR 304
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK-------- 121
++V V G H+ C+ G +YTWG G GR GD IP +P+K
Sbjct: 305 DIVFVNAGDSHSACIDRQGVLYTWG---SGGFGRLGHGDQGEIP----VPRKVEGFGGVP 357
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESV-SGIVKIAS 179
+Q++ G H++AL GTV+AWG+ G G G+ P L + + ++ IA+
Sbjct: 358 VLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAA 417
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRS-------ASRNARRGMSFLEP--GEVPL 230
G H +T G+LL G +LG Q++ A R +S L+ G L
Sbjct: 418 GPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRL 477
Query: 231 KRKHID-DVF-------------------TGVYNTF-ISSKGSILAFGLNNYSQLGEA-- 267
KR++ D DV G +T ++ G++ +G N+ QLG
Sbjct: 478 KREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED 537
Query: 268 --DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ + + CF TP +A G H LA+ G ++A+G +D G+LGL
Sbjct: 538 VEEDQYEPVKLECFSTP----------IRRIACGSKHCLAVAQYGDVFAWGANDNGQLGL 587
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
V P EP + +L + + CG+ S I S G G Q +G+
Sbjct: 588 -GVVRPSFEPAAVTAL--RQAVDVFCGDDYSACITSLG---------GAQSVSGETGTEF 635
Query: 386 NSEGKIYAFGRHDYGRLGL-KNVS-------EPVTEPTPI-----PSLQDKTITSIAC-- 430
G ++A+G + G+LGL ++V+ + V P+ SL+ + + C
Sbjct: 636 ---GDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS 692
Query: 431 ------GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
G S AI ++G Y WG G +LG G + P + + + + VA+
Sbjct: 693 FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPK--GVRLRSVAA 750
Query: 485 GGQHSVILA 493
G HS+ L+
Sbjct: 751 GACHSLALS 759
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 189/513 (36%), Gaps = 124/513 (24%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G+ L G+G+ G G+ V K + +E V+ + G H+ +T G + WG
Sbjct: 381 GAGLALGFGEGEDGSGGM---VAVPKHLSDIEA--AVLNIAAGPYHSAAVTVGGDLLVWG 435
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAV------------------------------- 123
LG + + F +L +
Sbjct: 436 VGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGT 495
Query: 124 --------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-I 174
+ G+SH++AL G V+ WGS D +G E Q P+KLE S I
Sbjct: 496 NQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPI 555
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+IA G+ H + + G++ G + GQLG R + EP V R+
Sbjct: 556 RRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS----------FEPAAVTALRQA 605
Query: 235 IDDVFTGV-YNTFISSKG--------------SILAFGLNNYSQLG----EADSEVQKSG 275
+D VF G Y+ I+S G + A+G +LG A +
Sbjct: 606 VD-VFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQ 664
Query: 276 NTCFFTPHLIKSLSDKK-----------FTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
F P SL + F+ L SG HSLA+ ++G+ YA+G YGRLG
Sbjct: 665 KVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLG 724
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ + T PT + + S+A G C S A+ +G L+ W G+ +D
Sbjct: 725 IGTTANAYT-PTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFW----------GRREDT 773
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK----TITSIACGNCVSFAIDS 440
++ + P L+ + + SI+ S A+
Sbjct: 774 CSTTNYM---------------------SPRIFMQLEGQGGVPKVKSISASERHSLAVTE 812
Query: 441 EGVLYGWGMGNGYQLGNGKE--DDILEPMKIEG 471
G ++ WG YQ G GK + + P ++ G
Sbjct: 813 AGEVFAWGDNKLYQTGCGKRQAERLDRPERVAG 845
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 143/582 (24%), Positives = 212/582 (36%), Gaps = 168/582 (28%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGL----------------------GPDVMERK-TF 62
AV + + GG V T G G+ G+LG GP K +
Sbjct: 115 AVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSR 174
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL---- 118
D + + G HT+ L+++G +Y WG G LG+ DS + P V L
Sbjct: 175 VRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDS-YTPVRVYLGSEA 233
Query: 119 -----------------PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI 161
P SAG HS+A DGT++ WG HG G G G
Sbjct: 234 GSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWG-----HGGNGRLGLGH 288
Query: 162 QKTPLKLESVS-----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ L V IV + +G H + +G L T G G+LG Q
Sbjct: 289 NRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQ------- 341
Query: 217 RRGMSFLEPGEVPLKRK-------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
GE+P+ RK + V G ++T ++ KG++ A+G GE +
Sbjct: 342 ---------GEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGE 392
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTML--ASGQHHSLALNSEGKIYAFGRHDYGRLG-- 324
SG H LSD + +L A+G +HS A+ G + +G RLG
Sbjct: 393 ---DGSGGMVAVPKH----LSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHG 445
Query: 325 -------------LKN------------VSEPVTEPTPIPSL----------QDKTITSI 349
L+N VS E + + L T+ S+
Sbjct: 446 DQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSL 505
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDD------------------------ 383
CG + A+ G ++ WG + QLG G+ E+D
Sbjct: 506 ECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHC 565
Query: 384 -ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-----------ITSIACG 431
+ G ++A+G +D G+LGL V P EP + +L+ ITS+
Sbjct: 566 LAVAQYGDVFAWGANDNGQLGL-GVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGA 624
Query: 432 NCVSFAIDSE-GVLYGWGMGNGYQLGNGKE---DDILEPMKI 469
VS +E G L+ WG +LG G++ IL P K+
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKV 666
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 126/308 (40%), Gaps = 69/308 (22%)
Query: 225 PGEVPLKRKH-IDDVFTGVYNTFISSK------GSILAFGLNNYSQLG----EADSEVQK 273
PG VP K +V G N+ + K G + FGL N +LG +AD
Sbjct: 93 PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGY 152
Query: 274 SGN---------TCFFTPHLIK-SLSDK-KFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
G+ +FTP + DK K ++ G H+LAL+ EG +YA+G YG
Sbjct: 153 QGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGN 212
Query: 323 LGLKNVSEPVT----------------EPTPIPSLQDKTITSIAC--GNCVSFAIDSEGV 364
LG + S+ T E + ++ + C G S A S+G
Sbjct: 213 LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGT 272
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
L+ WG G +LG G H+ G L P + + D+
Sbjct: 273 LWTWGHGGNGRLGLG-----------------HNRGSL----------SPAVVDYILDRD 305
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I + G+ S ID +GVLY WG G +LG+G + +I P K+EG VLQVA
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEG--FGGVPVLQVAC 363
Query: 485 GGQHSVIL 492
G H++ L
Sbjct: 364 GTFHTLAL 371
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 132/329 (40%), Gaps = 60/329 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTF--ALVEDLDNVVEVVVGGMHTVCLT--------- 85
G V G D GQLGLG + R +F A V L V+V G ++ C+T
Sbjct: 572 GDVFAWGANDNGQLGLG---VVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVS 628
Query: 86 -----EDGKVYTWGCNDEG--ALGREAEGDSEFIPQTV------------NLPKKAVQ-- 124
E G ++ WG + G LG + S PQ V +L +A +
Sbjct: 629 GETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRV 688
Query: 125 -------ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV-- 175
+ +G SHS+A+ G YAWG+ +G +G+ TP + + G+
Sbjct: 689 FCVSFSPLCSGTSHSLAITAQGECYAWGA--GYYGRLGIGTTANAYTPTRCDFPKGVRLR 746
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+A+GA H + L+ G+L G E + + R M G VP K K I
Sbjct: 747 SVAAGACHSLALSMDGDLWFWGRRED-----TCSTTNYMSPRIFMQLEGQGGVP-KVKSI 800
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ ++ ++ G + A+G N Q G + ++ P + L
Sbjct: 801 SA--SERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-----LDRPERVAGLP-SACQW 852
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+A+G S + + G+++A G GRLG
Sbjct: 853 VATGPQGSFFILASGEVFAAGVIKSGRLG 881
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 296 LASGQHHSLALNSEG---KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+A G +H+L + +G +++ +G++ LG+ P +P ++CG
Sbjct: 51 VALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCG 110
Query: 353 N-----CVSFAIDSEGVLYGWGMGNGYQLG--NGKEDDILNSEGKIYAFGRHDYGRLGLK 405
V A G +Y +G+GN +LG K D + +G G+ D
Sbjct: 111 TNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQED------- 163
Query: 406 NVSEPVTEPTPIPS---LQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
+ TP PS +DK I I+CG + A+ EG LY WG+G+ LG G
Sbjct: 164 ----GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTS 219
Query: 462 DILEPMKI 469
D P+++
Sbjct: 220 DSYTPVRV 227
>gi|307190185|gb|EFN74300.1| X-linked retinitis pigmentosa GTPase regulator [Camponotus
floridanus]
Length = 807
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 162/363 (44%), Gaps = 32/363 (8%)
Query: 13 AENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLG-PDVMERKTFAL 64
A+N + F+ + V ++C G + G D GQLGLG + + + +
Sbjct: 70 ADNVASHFFIRKDPVVAIECGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVK 129
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE--AEGDSEFIPQTVN----L 118
+ + V V G HT+ T K++ G N EG LGRE A GDS P +
Sbjct: 130 ILKPEKVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSAIGDSSSSPILIYDCGLA 189
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSGIVKI 177
+ VQI+AG HS+ L DG V AWGS + G +GL G G+ P K+ + +I
Sbjct: 190 GPRIVQIAAGSHHSMILTSDGGVVAWGS--NLEGQLGLPGVSGLVNKPTKVPIPEPVKEI 247
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
++G H LT G + G E G+LG I +++ A + M P I
Sbjct: 248 SAGYYHSAFLTESGLVYVCGESESGKLG-IDVNFSTQVAPKQMQLPTPA--------IHV 298
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDKKFTML 296
G + ++ +I G N QLG + + N HL + SL ++K +
Sbjct: 299 TCGGHHTLVLAENSNIYCSGSNASGQLG-----MGTNLNEIHMPKHLARGSLRNEKIVKI 353
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A G+ HS L GK++ G +G+LGL+ V E T Q+ IT++ACG C +
Sbjct: 354 ACGESHSAILTELGKLFTCGDGRHGKLGLEENENNVHEVTFAAKYQELFITNVACGGCHT 413
Query: 357 FAI 359
+
Sbjct: 414 ILV 416
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 165/387 (42%), Gaps = 69/387 (17%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQ 124
D VV + G H+ + + G+++ +G ND G LG G I P V + P+K
Sbjct: 82 DPVVAIECGDEHSAVICQSGRLFVFGSNDWGQLGL---GHKNHISKPSCVKILKPEKVTH 138
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESV----SGIVKI 177
++ G +H++ ++A GS ++ G +G + I +P+ + IV+I
Sbjct: 139 VACGRAHTLICTGAQKIFACGSNQE--GQLGRENSAIGDSSSSPILIYDCGLAGPRIVQI 196
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL--EPGEVPLKRKHI 235
A+G+ H ++LTS G ++ G +GQLG G+S L +P +VP+ +
Sbjct: 197 AAGSHHSMILTSDGGVVAWGSNLEGQLGL-----------PGVSGLVNKPTKVPIPEP-V 244
Query: 236 DDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS-DKKF 293
++ G Y++ F++ G + G + +LG + F T K +
Sbjct: 245 KEISAGYYHSAFLTESGLVYVCGESESGKLG---------IDVNFSTQVAPKQMQLPTPA 295
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP--SLQDKTITSIAC 351
+ G HH+L L IY G + G+LG+ + P + SL+++ I IAC
Sbjct: 296 IHVTCGGHHTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMPKHLARGSLRNEKIVKIAC 355
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G S IL GK++ G +G+LGL+ V
Sbjct: 356 GESHSA--------------------------ILTELGKLFTCGDGRHGKLGLEENENNV 389
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAI 438
E T Q+ IT++ACG C + +
Sbjct: 390 HEVTFAAKYQELFITNVACGGCHTILV 416
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 164/398 (41%), Gaps = 66/398 (16%)
Query: 132 SVALLEDGTVYAWGS--FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTS 189
S A E G V+ G F D+ S I+K P +V I G +H ++
Sbjct: 52 SCAAQETGAVFTIGRSRFADNVASHFF----IRKDP--------VVAIECGDEHSAVICQ 99
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFIS 248
G L G + GQLG + S+ P V LK + + V G +T I
Sbjct: 100 SGRLFVFGSNDWGQLGLGHKNHISK----------PSCVKILKPEKVTHVACGRAHTLIC 149
Query: 249 SKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS--LSDKKFTMLASGQHHSLA 305
+ I A G N QLG +S + S ++ P LI L+ + +A+G HHS+
Sbjct: 150 TGAQKIFACGSNQEGQLGRENSAIGDSSSS----PILIYDCGLAGPRIVQIAAGSHHSMI 205
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT--PIPSLQDKTITSIACGNCVSFAIDSEG 363
L S+G + A+G + G+LGL VS V +PT PIP + + I+ G S + G
Sbjct: 206 LTSDGGVVAWGSNLEGQLGLPGVSGLVNKPTKVPIP----EPVKEISAGYYHSAFLTESG 261
Query: 364 VLYGWGMGNGYQLG-------------------------NGKEDDILNSEGKIYAFGRHD 398
++Y G +LG G +L IY G +
Sbjct: 262 LVYVCGESESGKLGIDVNFSTQVAPKQMQLPTPAIHVTCGGHHTLVLAENSNIYCSGSNA 321
Query: 399 YGRLGLKNVSEPVTEPTPIP--SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G+LG+ + P + SL+++ I IACG S + G L+ G G +LG
Sbjct: 322 SGQLGMGTNLNEIHMPKHLARGSLRNEKIVKIACGESHSAILTELGKLFTCGDGRHGKLG 381
Query: 457 NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ ++ + + K + + VA GG H++++ +
Sbjct: 382 LEENENNVHEVTFAAKYQELF-ITNVACGGCHTILVGR 418
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 162/364 (44%), Gaps = 34/364 (9%)
Query: 13 AENPSQKVFVTSEAVPTLKCKT-------GGGVVLTCGQGDTGQLGLG-PDVMERKTFAL 64
A+N + F+ + V ++ C G + G D GQLGLG + + + +
Sbjct: 87 ADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVK 146
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLP--- 119
V + V V G HT+ T K++ G + EG LGR A GDS P +
Sbjct: 147 VLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTPVLIYDSGPT 206
Query: 120 -KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQKTPLKLESVSGIVKI 177
K VQI AG HS+AL DG V+AWGS + G +GL G+ P K+ + +I
Sbjct: 207 GSKIVQIVAGSHHSLALTSDGNVFAWGS--NLEGQLGLPDISGLVNKPTKVHIPEPVKRI 264
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+G H + LT G + G E G+LG S + P ++ L I
Sbjct: 265 NTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQ---------IMPKQMQLPNPVIYV 315
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK--SLSDKKFTM 295
G + F++ ++ G N+ QLG + T TP L+ +L +++ +
Sbjct: 316 ACGGHHTMFLTENNNLYCTGSNSSGQLGLG------TNVTELHTPKLLSQGALKNERISR 369
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
++ G+ H+ L GK+Y G +G+LGL+ V E T + + I++I+CG C
Sbjct: 370 ISCGESHTAILTESGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKQLFISNISCGGCH 429
Query: 356 SFAI 359
+ I
Sbjct: 430 TILI 433
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 157/359 (43%), Gaps = 58/359 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKR 232
++ I+ G +H ++ G L G + GQLG + S+ P V LK
Sbjct: 101 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISK----------PSCVKVLKP 150
Query: 233 KHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--S 289
+ + V G +T I + I A G + QLG S + S +T P LI +
Sbjct: 151 EKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTST----PVLIYDSGPT 206
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTIT 347
K + +G HHSLAL S+G ++A+G + G+LGL ++S V +PT IP + +
Sbjct: 207 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIP----EPVK 262
Query: 348 SIACGNCVSFAIDSEGVLYGWG-----------------MGNGYQLGN--------GKED 382
I G S + G++Y G M QL N G
Sbjct: 263 RINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPVIYVACGGHHT 322
Query: 383 DILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIP--SLQDKTITSIACGNCVSFAID 439
L +Y G + G+LGL NV+E T P + +L+++ I+ I+CG + +
Sbjct: 323 MFLTENNNLYCTGSNSSGQLGLGTNVTELHT-PKLLSQGALKNERISRISCGESHTAILT 381
Query: 440 SEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEG-KQLNNYTVLQVASGGQHSVILAKPK 496
G LY G G +LG E+++ E ++ KQL + ++ GG H++++ + +
Sbjct: 382 ESGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKQL---FISNISCGGCHTILIGQRR 437
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 42/388 (10%)
Query: 27 VPTLKCKTGGGVVLTC--------GQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVG 77
VP L CK+G +V TC G GQLGLG + K +++ D +V+V G
Sbjct: 9 VPRL-CKSGC-IVGTCLQRGMFSWGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGG 66
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLE 137
G HT+ LT+ G +Y+ G N +G LG + + +LP ++++ G +A+ E
Sbjct: 67 GGHTLLLTDCGAIYSCGWNSKGQLGLGHTDNLSVFKRIDHLP-PVIKVTCGWDFCLAITE 125
Query: 138 DGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLT 195
G +YAWG + G +G+ + + P K++ S + IA+G H + +T+ G L +
Sbjct: 126 VGDLYAWGC--NVFGQLGIPEIDSFTAIPTKIQIFSRNVTSIAAGLRHSLAVTNDGKLWS 183
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKG 251
G +GQLG + ++ G L+ VP + ++++ ++T +++ G
Sbjct: 184 WGSARKGQLG-------NDQSKTGYQLLQ--RVPKQVHKLENISSVSSGSYHSTALTACG 234
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTC------FFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ +G N ++QL + V +SG + T ++ ++ + SG H LA
Sbjct: 235 NMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILA 294
Query: 306 LNSEGKIYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
+ + ++ +GR+DY +LG+ + VT+P + L+D I IACG+ + A+
Sbjct: 295 ITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKD--IKQIACGSEHNLALS 352
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSE 388
+ + WG GNGKE+++L +
Sbjct: 353 DDNKVLAWGWNEHGSCGNGKEENVLTPQ 380
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 148/329 (44%), Gaps = 22/329 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G + +CG GQLGLG F ++ L V++V G + +TE G +Y W
Sbjct: 74 TDCGAIYSCGWNSKGQLGLG-HTDNLSVFKRIDHLPPVIKVTCGWDFCLAITEVGDLYAW 132
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCN G LG IP + + + V I+AG HS+A+ DG +++WGS R
Sbjct: 133 GCNVFGQLGIPEIDSFTAIPTKIQIFSRNVTSIAAGLRHSLAVTNDGKLWSWGSARKGQL 192
Query: 153 SMGLKGEG---IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +Q+ P ++ + I ++SG+ H LT+ GN+ G + QL Q
Sbjct: 193 GNDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNMYLWGSNKHNQLTNSVQ 252
Query: 210 RSASRNARRGMSFLE-PGEVPLKR---KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
L P ++ L+ + I V +G + I+ ++ +G N+YSQL
Sbjct: 253 GVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQL 312
Query: 265 GEADSEVQKSGNTC----FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
G + +GN C P + L D K +A G H+LAL+ + K+ A+G +++
Sbjct: 313 G-----ISLTGNNCAKKDVTKPKELVILKDIK--QIACGSEHNLALSDDNKVLAWGWNEH 365
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
G G E V P I L + I I
Sbjct: 366 GSCG-NGKEENVLTPQVIDDLAKEKIRLI 393
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 170/383 (44%), Gaps = 79/383 (20%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
+++WG+ +S+G +GL + + P K+ + IV + G H ++LT G + + G
Sbjct: 27 MFSWGA--NSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTDCGAIYSCGW 84
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFG 257
+GQLG + + + + + L P + V G + I+ G + A+G
Sbjct: 85 NSKGQLG--LGHTDNLSVFKRIDHLPP---------VIKVTCGWDFCLAITEVGDLYAWG 133
Query: 258 LNNYSQLG--EADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
N + QLG E DS FT P I+ S + T +A+G HSLA+ ++GK++
Sbjct: 134 CNVFGQLGIPEIDS----------FTAIPTKIQIFS-RNVTSIAAGLRHSLAVTNDGKLW 182
Query: 314 AFGRHDYGRLG--LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++G G+LG + + P + + I+S++ G+ S A+ + G +Y WG
Sbjct: 183 SWGSARKGQLGNDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNMYLWGSN 242
Query: 372 NGYQL-----------GNGKEDDI----------------------------LNSEGKIY 392
QL G+ KED + + + ++
Sbjct: 243 KHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVF 302
Query: 393 AFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+GR+DY +LG+ + VT+P + L+D I IACG+ + A+ + + W
Sbjct: 303 GWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKD--IKQIACGSEHNLALSDDNKVLAW 360
Query: 448 GMGNGYQLGNGKEDDILEPMKIE 470
G GNGKE+++L P I+
Sbjct: 361 GWNEHGSCGNGKEENVLTPQVID 383
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 65/302 (21%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++ G+I + G N+ QLG ++ P +IK + G
Sbjct: 67 GGHTLLLTDCGAIYSCGWNSKGQLGLGHTDNLSVFKRIDHLPPVIK---------VTCGW 117
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
LA+ G +YA+G + +G+LG+ + PT I + + +TSIA G S A+
Sbjct: 118 DFCLAITEVGDLYAWGCNVFGQLGIPEIDSFTAIPTKI-QIFSRNVTSIAAGLRHSLAVT 176
Query: 361 SEGVLYGWGMGNGYQLGNG-----------------KEDDI------------LNSEGKI 391
++G L+ WG QLGN K ++I L + G +
Sbjct: 177 NDGKLWSWGSARKGQLGNDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNM 236
Query: 392 YAFGRHDYGRLGLKNVSEPVTEP--------TPIPSLQD------KTITSIACGNCVSFA 437
Y +G + + +L N + V + P+P+ + + I ++ G A
Sbjct: 237 YLWGSNKHNQL--TNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILA 294
Query: 438 IDSEGVLYGWGMGNGYQLG------NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
I + ++GWG + QLG N + D+ +P ++ + + Q+A G +H++
Sbjct: 295 ITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILK----DIKQIACGSEHNLA 350
Query: 492 LA 493
L+
Sbjct: 351 LS 352
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 193/487 (39%), Gaps = 116/487 (23%)
Query: 37 GVVLTCGQGDTGQLGLG------------PDVMERKTFALVEDLDNVV-EVVVGGMHTVC 83
G++ + G + GQLGL P + ++ D V+ EV G HT+
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMV 1647
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
+ G+V+ WG N G LG GD+ PQ +SAG HS+A+ + +Y
Sbjct: 1648 INMSGQVFVWGANQTGQLGL---GDNS--PQI---------LSAGYEHSIAITKSNELYI 1693
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
WG S G G+ Q P+K+ D F ++ +LTA C
Sbjct: 1694 WG----SGGLCGIGTLKQQNAPVKI-------------DFF----NKSKILTAVC----- 1727
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
G++ ++ ++GL Q
Sbjct: 1728 ------------------------------------GGLHTVAVTKDWEAYSWGLTEGGQ 1751
Query: 264 LGEADSEVQK-----SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
LG S + K TP I L + +A G+ HS+A+ +G IY +G+
Sbjct: 1752 LGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQS 1811
Query: 319 DYGRLGLK---NVSEP--------VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+YG+LGL + EP V EP I L+ + I+ I CG + +G LYG
Sbjct: 1812 NYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYG 1871
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
G+ + QLG D E +I + + G+ N + V PT + Q I
Sbjct: 1872 CGVNDLGQLG----LDTFMEEMQIASLEKVKKGK---HNQTSDVILPTRVICFQGIAIHQ 1924
Query: 428 IACGNCVSFAIDSEGV--LYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
IACG S A+ +G+ L+ WGM QLG G+ L P ++ L + + ++A G
Sbjct: 1925 IACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQS--LCSSQIQRIACG 1982
Query: 486 GQHSVIL 492
HSV L
Sbjct: 1983 SMHSVAL 1989
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 40/200 (20%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDV-MERKTFALVEDL-----DNVVEVVVGGMH 80
T G + GQ + GQLGLG P + ME+ +++ + + +++ G
Sbjct: 1800 TKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATF 1859
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP-----------QT--VNLPKKAV---- 123
T+ T+ G +Y G ND G LG + + I QT V LP + +
Sbjct: 1860 TLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQG 1919
Query: 124 ----QISAGDSHSVALLEDGT--VYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIV 175
QI+ G+SHS+A+ DG ++AWG F++ G +GL ++ P ++S+ S I
Sbjct: 1920 IAIHQIACGESHSLAVSGDGMNMLWAWGMFKN--GQLGLGEVTMKLNPRPVQSLCSSQIQ 1977
Query: 176 KIASGADHFVMLTSRGNLLT 195
+IA G+ H V L N ++
Sbjct: 1978 RIACGSMHSVALIGDTNQIS 1997
>gi|308535275|ref|YP_002138732.2| hypothetical protein [Geobacter bemidjiensis Bem]
gi|308052620|gb|ACH38936.2| LOW QUALITY PROTEIN: ATS1 domain repeat protein [Geobacter
bemidjiensis Bem]
Length = 1917
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 189/422 (44%), Gaps = 58/422 (13%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHS 132
+V G HT+ L DG +++WG N G LG + + ++P + K + ISAG +
Sbjct: 1098 KVSAGTRHTIALKSDGTLWSWGYNAFGQLG-DGTTVNRYVPVQIGDDNKWISISAGVDFT 1156
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN 192
+AL DGT++ WG R+ G +G + +P+++ + + + I +G H L S G
Sbjct: 1157 LALKSDGTLWGWG--RNDLGQLGDGTTTFRYSPVQIGNSTDWISIHAGGYHAAALKSDGT 1214
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS 252
L G GQ+G + ++ L P ++ R G + + + G+
Sbjct: 1215 LWAWGGNYNGQVGNGST----------LNQLFPLQIGTDRSWTAISAGGAHTLALKANGT 1264
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G N+ Q+G + + + +P I + + K ++++G +HS+AL ++ +
Sbjct: 1265 LWGWGSNSSGQVGLGYGSLAQ-----YTSPTRIGTAGNWK--LISAGTYHSMALQTDNTL 1317
Query: 313 YAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+ +G + YG+LG S ++ P I S+ + + S A G+ V A+D G L+ WG
Sbjct: 1318 WGWGSNQYGQLGNGTTSSYGQLSFPVKIGSVSNWSSVSAAYGHTV--ALDLNGALWAWGR 1375
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ +LG+ D K+Y R+G + T T++
Sbjct: 1376 NSSGELGDATSVD------KVYPV------RIG-----------------TNATWTTMET 1406
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNG---KEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
G+ + A S+G L+ WG LG+G + D K +N +L + +GG
Sbjct: 1407 GDSYTVASKSDGTLWAWGNNWYGGLGDGTASERDGATTATKYVPTHINR--ILSINNGGI 1464
Query: 488 HS 489
++
Sbjct: 1465 YT 1466
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 198/499 (39%), Gaps = 132/499 (26%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L V V +GG H++ L DG V WG N A G S +P + V I+A
Sbjct: 119 LSAVASVSIGGSHSLALKSDGTVAAWGSN--------AYGQSS-VPSGL---SNVVAIAA 166
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
G+ HS AL DGTV WG +S+G P L SG+V IA+G H + L
Sbjct: 167 GERHSAALKSDGTVIEWG--DNSYGQ--------SSVPAGL---SGVVAIAAGDLHTLAL 213
Query: 188 TSRGNLLTAGCPEQGQ------LGRITQRSASRNARR-----------GMSFLEPGEVPL 230
S G ++ G GQ L +T +A N GM++ VP
Sbjct: 214 KSDGTVVAWGYNYDGQVTVPTGLAGVTAIAAGANNSAAVKTDGTVVVWGMNYTNNNNVPA 273
Query: 231 KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL--------------GEADSEVQKSGN 276
+ + G + + S GS++A+G NNY Q G D+ V KS
Sbjct: 274 GLTGVAAIAVGGHVVALKSDGSVVAWGNNNYGQARVPAGLSDVIAVSAGGTDTIVLKSDG 333
Query: 277 TCF---FTPHLIKSLSDKK--FTMLASGQHHSLALNSEGKIYAFGRHDYGR----LGLKN 327
T + H ++ K F+ ++ G +HS A+N +G I A+G + YG+ GL N
Sbjct: 334 TIVAWGYNSHSQDNIPQKPGCFSAVSVGGYHSTAINPDGTITAWGSNLYGQANVPTGLNN 393
Query: 328 VSEP-VTEPTPIPSLQDKTI----------------TSIACGNCVSFAIDSEGVLYGWGM 370
VS + E + D T+ T+IA G + A+ + + WG
Sbjct: 394 VSAVGIGEGVTVALKSDGTVVTWGHNSKTPPAVSGVTAIAVGGFHALALKPDATVVSWGT 453
Query: 371 G-----------NGYQ-LGNGKEDDI-LNSEGKIYAFGRHDYGRL----GLKNVSEPVTE 413
NG + G + L ++G + A+G + YG++ GL NV
Sbjct: 454 DYYGETMVPAGLNGVSAIAAGFYHSLALKADGSLVAWGNNGYGQVSIPAGLNNV------ 507
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
TSIA G + A+ S+G + WG + Q P + G
Sbjct: 508 ------------TSIAAGMDHNVAVRSDGTVAAWGSNSSGQA--------TVPAGLSG-- 545
Query: 474 LNNYTVLQVASGGQHSVIL 492
V QVA+G HSV L
Sbjct: 546 -----VRQVAAGDLHSVAL 559
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 167/376 (44%), Gaps = 36/376 (9%)
Query: 16 PSQKVF--VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVE 73
P Q VF V++ T+ K+ G + + G GQLG G V R + D + +
Sbjct: 1091 PQQTVFSKVSAGTRHTIALKSDG-TLWSWGYNAFGQLGDGTTV-NRYVPVQIGDDNKWIS 1148
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEF--IPQTVNLPKKAVQISAGDSH 131
+ G T+ L DG ++ WG ND G LG +G + F P + + I AG H
Sbjct: 1149 ISAGVDFTLALKSDGTLWGWGRNDLGQLG---DGTTTFRYSPVQIGNSTDWISIHAGGYH 1205
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
+ AL DGT++AWG + +G +G Q PL++ + I++G H + L + G
Sbjct: 1206 AAALKSDGTLWAWGG--NYNGQVGNGSTLNQLFPLQIGTDRSWTAISAGGAHTLALKANG 1263
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD---VFTGVYNTF-I 247
L G GQ+G G L P + + + G Y++ +
Sbjct: 1264 TLWGWGSNSSGQVG------------LGYGSLAQYTSPTRIGTAGNWKLISAGTYHSMAL 1311
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+ ++ +G N Y QLG + G F P I S+S+ ++ +++ H++AL+
Sbjct: 1312 QTDNTLWGWGSNQYGQLG--NGTTSSYGQLSF--PVKIGSVSN--WSSVSAAYGHTVALD 1365
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G ++A+GR+ G LG + V P+ + T T++ G+ + A S+G L+
Sbjct: 1366 LNGALWAWGRNSSGELGDATSVDKV---YPVRIGTNATWTTMETGDSYTVASKSDGTLWA 1422
Query: 368 WGMGNGYQLGNGKEDD 383
WG LG+G +
Sbjct: 1423 WGNNWYGGLGDGTASE 1438
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 47/316 (14%)
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
R+ R + N + P ++ V G +T + S G++ ++G N + QL
Sbjct: 1067 RVESRDTAGNVGFAVVTFVVDTTPPQQTVFSKVSAGTRHTIALKSDGTLWSWGYNAFGQL 1126
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G+ + V + + P I D K+ +++G +LAL S+G ++ +GR+D G+LG
Sbjct: 1127 GDG-TTVNR------YVPVQIGD--DNKWISISAGVDFTLALKSDGTLWGWGRNDLGQLG 1177
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD- 383
+ +P+ SI G + A+ S+G L+ WG Q+GNG +
Sbjct: 1178 DGTTTF---RYSPVQIGNSTDWISIHAGGYHAAALKSDGTLWAWGGNYNGQVGNGSTLNQ 1234
Query: 384 -----------------------ILNSEGKIYAFGRHDYGRLGLKNVS-EPVTEPTPIPS 419
L + G ++ +G + G++GL S T PT I +
Sbjct: 1235 LFPLQIGTDRSWTAISAGGAHTLALKANGTLWGWGSNSSGQVGLGYGSLAQYTSPTRIGT 1294
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE---PMKIEGKQLNN 476
+ + I+ G S A+ ++ L+GWG QLGNG + P+KI ++N
Sbjct: 1295 AGNWKL--ISAGTYHSMALQTDNTLWGWGSNQYGQLGNGTTSSYGQLSFPVKI--GSVSN 1350
Query: 477 YTVLQVASGGQHSVIL 492
++ + A G H+V L
Sbjct: 1351 WSSVSAAYG--HTVAL 1364
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 178/500 (35%), Gaps = 168/500 (33%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L NVV + G H+ L DG V WG N G +P + V I+A
Sbjct: 158 LSNVVAIAAGERHSAALKSDGTVIEWGDNSYG---------QSSVPAGL---SGVVAIAA 205
Query: 128 GDSHSVALLEDGTVYAWGSFRD------------------SHGSMGLKGEGI-------- 161
GD H++AL DGTV AWG D ++ S +K +G
Sbjct: 206 GDLHTLALKSDGTVVAWGYNYDGQVTVPTGLAGVTAIAAGANNSAAVKTDGTVVVWGMNY 265
Query: 162 ---QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ--------------- 203
P L +G+ IA G H V L S G+++ G GQ
Sbjct: 266 TNNNNVPAGL---TGVAAIAVGG-HVVALKSDGSVVAWGNNNYGQARVPAGLSDVIAVSA 321
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY-NTFISSKGSILAFGLNN 260
I +S G + +P K V G Y +T I+ G+I A+G N
Sbjct: 322 GGTDTIVLKSDGTIVAWGYNSHSQDNIPQKPGCFSAVSVGGYHSTAINPDGTITAWGSNL 381
Query: 261 YSQ--------------LGEADSEVQKSGNTCFF------TPHLIKSLSD---------- 290
Y Q +GE + KS T TP + ++
Sbjct: 382 YGQANVPTGLNNVSAVGIGEGVTVALKSDGTVVTWGHNSKTPPAVSGVTAIAVGGFHALA 441
Query: 291 ------------------------KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL--- 323
+ +A+G +HSLAL ++G + A+G + YG++
Sbjct: 442 LKPDATVVSWGTDYYGETMVPAGLNGVSAIAAGFYHSLALKADGSLVAWGNNGYGQVSIP 501
Query: 324 -GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG--------- 373
GL NV TSIA G + A+ S+G + WG +
Sbjct: 502 AGLNNV------------------TSIAAGMDHNVAVRSDGTVAAWGSNSSGQATVPAGL 543
Query: 374 ---YQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS-LQDKTITSI 428
Q+ G + L ++G + A+G YG+ T +P+ L D + ++
Sbjct: 544 SGVRQVAAGDLHSVALKTDGTVIAWGDSTYGQ-------------TAVPAGLTD--VVAV 588
Query: 429 ACGNCVSFAIDSEGVLYGWG 448
A GN + A+ S G + GWG
Sbjct: 589 AAGNGYTLALKSGGTVVGWG 608
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 100/256 (39%), Gaps = 68/256 (26%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
V + VGG H + L D V +WG + G +P +N I+AG
Sbjct: 429 VTAIAVGGFHALALKPDATVVSWGTDYYG---------ETMVPAGLN---GVSAIAAGFY 476
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
HS+AL DG++ AWG+ G G P L +V+ IA+G DH V + S
Sbjct: 477 HSLALKADGSLVAWGN----------NGYGQVSIPAGLNNVT---SIAAGMDHNVAVRSD 523
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISS 249
G + G GQ VP + V G +++ + +
Sbjct: 524 GTVAAWGSNSSGQ----------------------ATVPAGLSGVRQVAAGDLHSVALKT 561
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G+++A+G + Y Q + L+D +A+G ++LAL S
Sbjct: 562 DGTVIAWGDSTYGQTA------------------VPAGLTD--VVAVAAGNGYTLALKSG 601
Query: 310 GKIYAFGRHDYGRLGL 325
G + +G + +G+ L
Sbjct: 602 GTVVGWGDNRFGQATL 617
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 68 LDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISA 127
L+NV + G H V + DG V WG N G +P ++ + Q++A
Sbjct: 504 LNNVTSIAAGMDHNVAVRSDGTVAAWGSNSSG---------QATVPAGLSGVR---QVAA 551
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVML 187
GD HSVAL DGTV AWG DS G P L V V +A+G + + L
Sbjct: 552 GDLHSVALKTDGTVIAWG---DST-------YGQTAVPAGLTDV---VAVAAGNGYTLAL 598
Query: 188 TSRGNLLTAGCPEQGQ 203
S G ++ G GQ
Sbjct: 599 KSGGTVVGWGDNRFGQ 614
>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
Length = 364
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 171/360 (47%), Gaps = 37/360 (10%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVE----DL--DNVVEVVVGGMHTVCLTEDGKVY 91
++ + G GQLGLG E + V DL DN+V + G HT+ L ++G VY
Sbjct: 2 ILYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVY 61
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G N +G LG D+ I Q L + VQIS G S A+ E G + WG+ +S
Sbjct: 62 CCGWNSKGQLG--TSDDTLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGN--NS 117
Query: 151 HGSMGL-KGEGIQKTPLKLES----VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+ +GL K P +L+ +G +++ G H ML G LL AG +GQLG
Sbjct: 118 YTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLG 177
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQL 264
+ N +L +VP + I + +G ++T + G++ ++G N Y QL
Sbjct: 178 -LGDNFDDNN------YLSISKVP-DLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQL 229
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + S F P I L D + +G H+ AL+ G+++ +GR+ YG+LG
Sbjct: 230 G-IDPNISNS-----FVPMEI--LHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG 281
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ E +P IP L+D +T ++ G+ + A+ +G L+ WG G G + D+
Sbjct: 282 AQR--EVTYKPEKIPGLKD--VTQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDV 337
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 61/391 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL------PKKAVQISAGDSHSVALLEDGTVYA 143
+Y+WG N G LG + D E P+ VNL V I+ G H++ L ++G VY
Sbjct: 3 LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYC 62
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G +S G +G + ++ T +++ IV+I+ G D ++ G G Q
Sbjct: 63 CG--WNSKGQLGTSDDTLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYTQ 120
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRK---HIDDVFTGV-YNTFISSKGSILAFGLN 259
LG + + G+ P + + +K V G+ ++ ++ G +L G
Sbjct: 121 LGLSKSITCT-----GI----PSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTG 171
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG D+ + + + + L D +ASGQHH++ L +G +Y++G +
Sbjct: 172 SKGQLGLGDNFDDNN----YLSISKVPDLED--IVSIASGQHHTVVLKEDGTVYSWGENK 225
Query: 320 YGRLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
YG+LG+ N+S P+ L D + S+ G + A
Sbjct: 226 YGQLGIDPNISNSFV---PMEILHDANLGSVYAGWTHTAA-------------------- 262
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L+ G+++ +GR+ YG+LG + E +P IP L+D +T ++ G+ + A+
Sbjct: 263 ------LSKSGEVFTWGRNSYGQLGAQR--EVTYKPEKIPGLKD--VTQLSVGSEHNLAV 312
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+G L+ WG G G + D+ +P +I
Sbjct: 313 TKDGKLFVWGWNEHGSCGTGDKTDVCKPTQI 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFAL--VEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G +L G G GQLGLG + + ++ V DL+++V + G HTV L EDG VY+WG
Sbjct: 163 GGLLVAGTGSKGQLGLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWG 222
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG + + F+P + + AG +H+ AL + G V+ WG R+S+G +
Sbjct: 223 ENKYGQLGIDPNISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWG--RNSYGQL 280
Query: 155 GLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--------R 206
G + E + P K+ + + +++ G++H + +T G L G E G G +
Sbjct: 281 GAQRE-VTYKPEKIPGLKDVTQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDVCK 339
Query: 207 ITQRSASRNARRGMS 221
TQ A+R + +
Sbjct: 340 PTQIFANRKVKAAFA 354
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 148/331 (44%), Gaps = 34/331 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V CG GQLG D ++ +++ +V++ G + ++E GK + WG N
Sbjct: 58 GFVYCCGWNSKGQLGTSDDTLKITQIEILKGF-RIVQISCGWDFSAAVSECGKQFVWGNN 116
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAV----QISAGDSHSVALLEDGTVYAWGSFRDSHG 152
LG IP + + +K Q+S G HS L +DG + G+ S G
Sbjct: 117 SYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGT--GSKG 174
Query: 153 SMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL L + V IV IASG H V+L G + + G + GQLG
Sbjct: 175 QLGLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPN 234
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEAD 268
S S P E+ L ++ V+ G +T +S G + +G N+Y QLG A
Sbjct: 235 ISNS---------FVPMEI-LHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG-AQ 283
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
EV + P I L D T L+ G H+LA+ +GK++ +G +++G G +
Sbjct: 284 REVT-------YKPEKIPGLKD--VTQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDK 334
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
++ V +PT I + K + AC SFA+
Sbjct: 335 TD-VCKPTQIFA-NRKVKAAFACTGS-SFAV 362
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 177/405 (43%), Gaps = 80/405 (19%)
Query: 141 VYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WG+ SHG +GL G + + + + + S + ++A G H + LT+ G +
Sbjct: 3 LYCWGN--ASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYAC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-VFTGV-----YNTFISSK 250
G + QLG P + PL+ ++D V T + ++ ++
Sbjct: 61 GSNDYSQLGHEL----------------PTKRPLQIPELEDYVITQIACGSRHSMALTEW 104
Query: 251 GSILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G +L++G N QLG A D +V + P +++ L K +A G +HSLAL
Sbjct: 105 GQVLSWGDNECGQLGHASDQDVIQ-------LPKIVRYLVSKTVVQIACGNNHSLALTCC 157
Query: 310 GKIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G++Y++G + YG+LG+K+ SE P + +L +IACG +F I ++G
Sbjct: 158 GELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFG 217
Query: 368 WGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGR 401
WG N QLG E + L +EG ++ G YG+
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKE 460
LG S P + L TI+ +ACGN + A + S G +YG+G+G+ QLG
Sbjct: 278 LG-HGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNT 336
Query: 461 DDILEPMKIEGKQLN--------------NYTVLQVASGGQHSVI 491
+ P + G ++ + + Q+ SGG S++
Sbjct: 337 KSLNLPQVVIGPWVSPSGSALLQSSDEKISVVIHQIFSGGDQSIV 381
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PSQ + AV + C T G V CG D QLG ++ ++
Sbjct: 22 EQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSNDYSQLG--HELPTKRPLQ 79
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E D V+ ++ G H++ LTE G+V +WG N+ G LG ++ D +P+ V + K
Sbjct: 80 IPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSK 139
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK--GEGIQ-KTPLKLESVSGI--V 175
VQI+ G++HS+AL G +Y+WGS + +G +G+K E Q P++L ++ GI
Sbjct: 140 TVVQIACGNNHSLALTCCGELYSWGS--NIYGQLGVKSPSELSQCNYPMRLTTLLGIPAA 197
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H +++ + G GQLG T R+ + G+ F+ G+
Sbjct: 198 AIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGD-- 255
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++++G + G Y QLG S + P ++ L
Sbjct: 256 ------------EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMELM 296
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
+ +A G H+LAL S G+IY FG G+LG +N
Sbjct: 297 GSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRN 335
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 34/242 (14%)
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
TP I D +A G H+L L + GK+YA G +DY +LG + P P IP
Sbjct: 25 LTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSNDYSQLGHE---LPTKRPLQIP 81
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------- 384
L+D IT IACG+ S A+ G + WG QLG+ + D+
Sbjct: 82 ELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTV 141
Query: 385 ------------LNSEGKIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIAC 430
L G++Y++G + YG+LG+K+ SE P + +L +IAC
Sbjct: 142 VQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIAC 201
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +F I ++GWG N QLG E + P ++ K L V VA G + SV
Sbjct: 202 GGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQL--KTLRTLGVRFVACGDEFSV 259
Query: 491 IL 492
L
Sbjct: 260 FL 261
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 156/377 (41%), Gaps = 54/377 (14%)
Query: 40 LTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
L C G GQLGLG ++ D V +V G HT+ LT GKVY G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPD-SAVNQVACGHRHTLFLTASGKVYACG 61
Query: 95 CNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
ND LG E IP+ + QI+ G HS+AL E G V +WG + G
Sbjct: 62 SNDYSQLGHELPTKRPLQIPELEDY--VITQIACGSRHSMALTEWGQVLSWGD--NECGQ 117
Query: 154 MGLKGEG--IQKTPLKLESVSG-IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G + IQ + VS +V+IA G +H + LT G L + G GQLG +
Sbjct: 118 LGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLG-VKSP 176
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADS 269
S M +P + G +TF+ SK S + +G NN QLG D
Sbjct: 177 SELSQCNYPMRLTTLLGIPAAA-----IACGGNHTFLISKSSAVFGWGRNNCGQLGLND- 230
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E ++ P +K+L +A G S+ L +EG ++ G YG+LG S
Sbjct: 231 ETNRA------YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG-HGFS 283
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
P + L TI+ +ACGN + A+ + S G
Sbjct: 284 SNEMLPRMVMELMGSTISQVACGNRHTLAL-------------------------VPSRG 318
Query: 390 KIYAFGRHDYGRLGLKN 406
+IY FG G+LG +N
Sbjct: 319 RIYGFGLGSSGQLGTRN 335
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ IP D + +ACG+
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGH---------------- 45
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +DY +LG + P P IP L+D IT IA
Sbjct: 46 ----------RHTLFLTASGKVYACGSNDYSQLGHE---LPTKRPLQIPELEDYVITQIA 92
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG QLG+ + D+++ KI + L + TV+Q+A G HS
Sbjct: 93 CGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKI-VRYLVSKTVVQIACGNNHS 151
Query: 490 VIL 492
+ L
Sbjct: 152 LAL 154
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 153/323 (47%), Gaps = 25/323 (7%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCL--TEDGKVYTWGCN 96
V T G G G LG G D+ + L ++ + G+HTV EDGKVY+WG
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKA--VQISAGDSHSVALLE---DGTVYAWGSFRDSH 151
G LG + S F P + K + + IS + H+ A+ G+VY++G +S
Sbjct: 61 KYGILG-QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQ 119
Query: 152 GSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + + + + I+K+A G H L+++GNL G + GQLG
Sbjct: 120 LGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGL----- 174
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL-AFGLNNYSQLGEADSE 270
+ N + L GE K+ + DV G +T I + G ++ AFG N Y Q+ A
Sbjct: 175 GNYNLSTEPTILHIGE---KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQI--AAPS 229
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ K F P+ I + K+F ++ G HS A+ GK+YA+G GRLGL + +
Sbjct: 230 MNK-----FHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQ 284
Query: 331 PVTEPTPIPSLQDKTITSIACGN 353
+ PT + +DK I IACG+
Sbjct: 285 R-SSPTEVEGFRDKKIGRIACGS 306
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 169/407 (41%), Gaps = 99/407 (24%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALL--EDGTVYAWGS 146
VYTWG GALG + D P+ V L ++ A H+V L EDG VY+WG
Sbjct: 1 VYTWGSGINGALGHGEDIDIP-SPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGL 59
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G G+ G+G L S +KIAS N++ C E
Sbjct: 60 -----GKYGILGQG------NLRSRFAPLKIAS--------FKSSNVIDISCHE------ 94
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
L V T +++ GS+ +FG N+ SQLG
Sbjct: 95 ----------------LHAAAV----------------TSVTNTGSVYSFGDNSNSQLGV 122
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
D+E + P L+ L+D+ +A G++HS AL+++G ++ +G D G+LGL
Sbjct: 123 GDTEP-------YAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLG 175
Query: 327 NVSEPVTEPTPIPSLQDKT-ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
N + TEPT + + K + +ACG+ IL
Sbjct: 176 NYNLS-TEPTILHIGEKKAKVMDVACGDL--------------------------HTCIL 208
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
G +YAFG + YG++ ++++ P I K S++CG+ S AI G LY
Sbjct: 209 TVGGLVYAFGSNIYGQIAAPSMNK-FHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLY 267
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG+ +LG G P ++EG + + ++A G +H+ L
Sbjct: 268 AWGLETDGRLGLGDCKQRSSPTEVEG--FRDKKIGRIACGSKHTAAL 312
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVM--ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G + G GD GQLGLG + E + E V++V G +HT LT G VY +G
Sbjct: 159 GNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFG 218
Query: 95 CNDEGALGREAEGDSEF-IPQTV--NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
N G + A ++F +P + N K+ V +S G HS A+ E+G +YAWG ++
Sbjct: 219 SNIYGQIA--APSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWG--LETD 274
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVML 187
G +GL + +P ++E I +IA G+ H L
Sbjct: 275 GRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + G + FG N+ QLG+ S TP L+ +L K +A G HH
Sbjct: 50 HTAILMENGEVFTFGRGNFGQLGQGASVTAN-----VSTPALVSALQGKHVKQVACGWHH 104
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+ AL G++Y +G +YGRLG + + P + SLQ K +T +A G S I
Sbjct: 105 TCALIDNGQLYTWGSGEYGRLGHGDEVRQAS-PKLVESLQGKEVTFVAAGGFHSSVIIEG 163
Query: 363 GVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGR 396
G L WG G QLG+G E D +L +++ +G
Sbjct: 164 GNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGS 223
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
++G+LG+ + E EP I +LQ + I+ G S A+ SEGVLY WG G+ QLG
Sbjct: 224 GEFGKLGIGD-EEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLG 282
Query: 457 NGKEDDILEPMKIE 470
+G E+ P+ +E
Sbjct: 283 HGDENSQNIPVVVE 296
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 39/303 (12%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + GQG GQLG G + +R+ +V L NV +V G HT L E+G+V+T+G
Sbjct: 5 GSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFG 64
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--------KKAVQISAGDSHSVALLEDGTVYAWGS 146
+ G LG+ A + V+ P K Q++ G H+ AL+++G +Y WGS
Sbjct: 65 RGNFGQLGQGAS-----VTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+G +G E Q +P +ES+ G + +A+G H ++ GNLLT G GQL
Sbjct: 120 --GEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQL 177
Query: 205 GR--ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNY 261
G T R + + +++ +V G ++T + ++ + +G +
Sbjct: 178 GHGDETDRKTPKMVK-----------GVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEF 226
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
+LG D E P +I +L +++G HS AL SEG +Y +G D G
Sbjct: 227 GKLGIGDEEKHAE-------PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKG 279
Query: 322 RLG 324
+LG
Sbjct: 280 QLG 282
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMER-KTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTW 93
G V T G+G+ GQLG G V T ALV L +V +V G HT L ++G++YTW
Sbjct: 58 GEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTW 117
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G + G LG E +L K V ++AG HS ++E G + WG G
Sbjct: 118 GSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGG--GYFG 175
Query: 153 SMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G E +KTP ++ V + ++A G H +MLT + T G E G+LG +
Sbjct: 176 QLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEE 235
Query: 211 SASR----NARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ A +G+ + HI G ++ ++S+G + +G + QLG
Sbjct: 236 KHAEPIMITALQGVGVI----------HIST--GGFHSAALTSEGVLYTWGGGDKGQLGH 283
Query: 267 ADSEVQ 272
D Q
Sbjct: 284 GDENSQ 289
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 306 LNSEG-KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
++ EG ++Y++G+ G+LG + + +P + + + ++CGN
Sbjct: 1 MSREGSEVYSWGQGVLGQLGHGD-EKTQRQPRLVVAFLGFNVRQVSCGN----------- 48
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDK 423
+ IL G+++ FGR ++G+LG +V+ V+ P + +LQ K
Sbjct: 49 ---------------QHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGK 93
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+ +ACG + A+ G LY WG G +LG+G E P +E Q T VA
Sbjct: 94 HVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTF--VA 151
Query: 484 SGGQHSVIL 492
+GG HS ++
Sbjct: 152 AGGFHSSVI 160
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGCN 96
V T G G+ G+LG+G D + ++ L V + + GG H+ LT +G +YTWG
Sbjct: 218 VWTWGSGEFGKLGIG-DEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276
Query: 97 DEGALGREAEGDSEFIPQTVNL 118
D+G LG E +S+ IP V +
Sbjct: 277 DKGQLGHGDE-NSQNIPVVVEV 297
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 225/531 (42%), Gaps = 101/531 (19%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTED 87
++ C T G + T G G G+LGLG + + LD ++V V G H+ C+
Sbjct: 264 SMAC-TSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQ 322
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--------AVQISAGDSHSVALLEDG 139
G +YTWG G GR GD IP +P+K +Q++ G H++AL G
Sbjct: 323 GVLYTWG---SGGFGRLGHGDQGEIP----VPRKVEGFGGVPVLQVACGTFHTLALTHKG 375
Query: 140 TVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAG 197
TV+AWG+ G G G+ P L + + ++ IA+G H +T G+LL G
Sbjct: 376 TVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWG 435
Query: 198 CPEQGQLGRITQRS-------ASRNARRGMSFLEP--GEVPLKRKHID-DVF-------- 239
+LG Q++ A R +S L+ G LKR++ D DV
Sbjct: 436 VGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGT 495
Query: 240 -----------TGVYNTF-ISSKGSILAFGLNNYSQLGEA----DSEVQKSGNTCFFTPH 283
G +T ++ G++ +G N+ QLG + + + CF TP
Sbjct: 496 NQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTP- 554
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+A G H LA+ G ++A+G +D G+LGL V P EP + +L
Sbjct: 555 ---------IRRIACGSKHCLAVAQYGDVFAWGANDNGQLGL-GVVRPSFEPAAVTAL-- 602
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLG 403
+ + CG+ S I S G G Q +G+ G ++A+G + G+LG
Sbjct: 603 RQAVDVFCGDDYSACITSLG---------GAQSVSGETGTEF---GDLWAWGAAESGKLG 650
Query: 404 L-KNVS-------EPVTEPTPI-----PSLQDKTITSIAC--------GNCVSFAIDSEG 442
L ++V+ + V P+ SL+ + + C G S AI ++G
Sbjct: 651 LGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQG 710
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
Y WG G +LG G + P + + + + VA+G HS+ L+
Sbjct: 711 ECYAWGAGYYGRLGIGTTANAYTPTRCDFPK--GVRLRSVAAGACHSLALS 759
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 189/513 (36%), Gaps = 124/513 (24%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G G+ L G+G+ G G+ V K + +E V+ + G H+ +T G + WG
Sbjct: 381 GAGLALGFGEGEDGSGGM---VAVPKHLSDIEA--AVLNIAAGPYHSAAVTVGGDLLVWG 435
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAV------------------------------- 123
LG + + F +L +
Sbjct: 436 VGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGT 495
Query: 124 --------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-I 174
+ G+SH++AL G V+ WGS D +G E Q P+KLE S I
Sbjct: 496 NQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPI 555
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+IA G+ H + + G++ G + GQLG R + EP V R+
Sbjct: 556 RRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS----------FEPAAVTALRQA 605
Query: 235 IDDVFTGV-YNTFISSKG--------------SILAFGLNNYSQLG----EADSEVQKSG 275
+D VF G Y+ I+S G + A+G +LG A +
Sbjct: 606 VD-VFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQ 664
Query: 276 NTCFFTPHLIKSLSDKK-----------FTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
F P SL + F+ L SG HSLA+ ++G+ YA+G YGRLG
Sbjct: 665 KVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLG 724
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
+ + T PT + + S+A G C S A+ +G L+ W G+ +D
Sbjct: 725 IGTTANAYT-PTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFW----------GRREDT 773
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK----TITSIACGNCVSFAIDS 440
++ + P L+ + + SI+ S A+
Sbjct: 774 CSTTNYM---------------------SPRIFMQLEGQGGVPKVKSISASERHSLAVTE 812
Query: 441 EGVLYGWGMGNGYQLGNGKE--DDILEPMKIEG 471
G ++ WG YQ G GK + + P ++ G
Sbjct: 813 AGEVFAWGDNKLYQTGCGKRQAERLDRPERVAG 845
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 143/582 (24%), Positives = 212/582 (36%), Gaps = 168/582 (28%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGL----------------------GPDVMERK-TF 62
AV + + GG V T G G+ G+LG GP K +
Sbjct: 115 AVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSR 174
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL---- 118
D + + G HT+ L+++G +Y WG G LG+ DS + P V L
Sbjct: 175 VRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDS-YTPVRVYLGSEA 233
Query: 119 -----------------PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI 161
P SAG HS+A DGT++ WG HG G G G
Sbjct: 234 GSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWG-----HGGNGRLGLGH 288
Query: 162 QKTPLKLESVS-----GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ L V IV + +G H + +G L T G G+LG Q
Sbjct: 289 NRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQ------- 341
Query: 217 RRGMSFLEPGEVPLKRK-------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
GE+P+ RK + V G ++T ++ KG++ A+G GE +
Sbjct: 342 ---------GEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGE 392
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTML--ASGQHHSLALNSEGKIYAFGRHDYGRLG-- 324
SG H LSD + +L A+G +HS A+ G + +G RLG
Sbjct: 393 ---DGSGGMVAVPKH----LSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHG 445
Query: 325 -------------LKN------------VSEPVTEPTPIPSL----------QDKTITSI 349
L+N VS E + + L T+ S+
Sbjct: 446 DQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSL 505
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDD------------------------ 383
CG + A+ G ++ WG + QLG G+ E+D
Sbjct: 506 ECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHC 565
Query: 384 -ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-----------ITSIACG 431
+ G ++A+G +D G+LGL V P EP + +L+ ITS+
Sbjct: 566 LAVAQYGDVFAWGANDNGQLGL-GVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGA 624
Query: 432 NCVSFAIDSE-GVLYGWGMGNGYQLGNGKE---DDILEPMKI 469
VS +E G L+ WG +LG G++ IL P K+
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKV 666
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 126/308 (40%), Gaps = 69/308 (22%)
Query: 225 PGEVPLKRKH-IDDVFTGVYNTFISSK------GSILAFGLNNYSQLG----EADSEVQK 273
PG VP K +V G N+ + K G + FGL N +LG +AD
Sbjct: 93 PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGY 152
Query: 274 SGN---------TCFFTPHLIK-SLSDK-KFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
G+ +FTP + DK K ++ G H+LAL+ EG +YA+G YG
Sbjct: 153 QGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGN 212
Query: 323 LGLKNVSEPVT----------------EPTPIPSLQDKTITSIAC--GNCVSFAIDSEGV 364
LG + S+ T E + ++ + C G S A S+G
Sbjct: 213 LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGT 272
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
L+ WG G +LG G H+ G L P + + D+
Sbjct: 273 LWTWGHGGNGRLGLG-----------------HNRGSL----------SPAVVDYILDRD 305
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
I + G+ S ID +GVLY WG G +LG+G + +I P K+EG VLQVA
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEG--FGGVPVLQVAC 363
Query: 485 GGQHSVIL 492
G H++ L
Sbjct: 364 GTFHTLAL 371
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 177/418 (42%), Gaps = 81/418 (19%)
Query: 119 PKKAVQISAGDSHSVALLEDG---TVYAWGSFRDSHGSMGLK-GEGIQKTPLKLESVSGI 174
P +++ G H++ + G ++ WG + MG++ E + + S G
Sbjct: 45 PASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGT 104
Query: 175 VKIASGADHFVMLTSR-----GNLLTAGCPEQGQLGRITQRS----------ASRNARRG 219
+++ G ++ +L R G + T G +G+LG ++ + G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164
Query: 220 MSFL--EPGEVPLKRK-HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
S+ +P V + K I + G +T +S +G++ A+G+ +Y LG+ D+
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDS--- 221
Query: 276 NTCFFTPHLI----KSLSDKK---------------FTMLASGQHHSLALNSEGKIYAFG 316
+TP + ++ S KK T ++G HS+A S+G ++ +G
Sbjct: 222 ----YTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWG 277
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
GRLGL + ++ P + + D+ I + G+ S ID +GVLY WG G +L
Sbjct: 278 HGGNGRLGLGHNRGSLS-PAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRL 336
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G + +I K+ FG +P LQ +ACG +
Sbjct: 337 GHGDQGEIPVPR-KVEGFG--------------------GVPVLQ------VACGTFHTL 369
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY--TVLQVASGGQHSVIL 492
A+ +G ++ WG G LG G+ +D M K L++ VL +A+G HS +
Sbjct: 370 ALTHKGTVFAWGA--GLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAV 425
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 132/329 (40%), Gaps = 60/329 (18%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTF--ALVEDLDNVVEVVVGGMHTVCLT--------- 85
G V G D GQLGLG + R +F A V L V+V G ++ C+T
Sbjct: 572 GDVFAWGANDNGQLGLG---VVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVS 628
Query: 86 -----EDGKVYTWGCNDEG--ALGREAEGDSEFIPQTV------------NLPKKAVQ-- 124
E G ++ WG + G LG + S PQ V +L +A +
Sbjct: 629 GETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRV 688
Query: 125 -------ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV-- 175
+ +G SHS+A+ G YAWG+ +G +G+ TP + + G+
Sbjct: 689 FCVSFSPLCSGTSHSLAITAQGECYAWGA--GYYGRLGIGTTANAYTPTRCDFPKGVRLR 746
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+A+GA H + L+ G+L G E + + R M G VP K K I
Sbjct: 747 SVAAGACHSLALSMDGDLWFWGRRED-----TCSTTNYMSPRIFMQLEGQGGVP-KVKSI 800
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ ++ ++ G + A+G N Q G + ++ P + L
Sbjct: 801 SA--SERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-----LDRPERVAGLP-SACQW 852
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+A+G S + + G+++A G GRLG
Sbjct: 853 VATGPQGSFFILASGEVFAAGVIKSGRLG 881
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 148/322 (45%), Gaps = 26/322 (8%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH 131
V V G H+V E V+ WG D G LG + E + ++ P K+ SAG H
Sbjct: 89 VGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFN-QYKPYVNPRIKRVQMASAGGLH 146
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVM 186
++AL E G VY WG +G+ G G G + L + G IV +++G H
Sbjct: 147 NIALTEVGNVYTWG-----YGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAA 201
Query: 187 LTSRGNLLTAGCPE-QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
+T G L T G E +G+LG A + ++ +VP+ + FT
Sbjct: 202 VTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFT----M 257
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G + ++G N +LG ++ N + P ++ +L D +A G H+ A
Sbjct: 258 ALTKSGQLWSWGGNANHELGHGT----RANN---WKPKVVAALEDVTLVQVACGGFHAAA 310
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +GK+ +G G+LG + E EP + ++ DKT T IACG + AI G L
Sbjct: 311 LTQDGKVITWGYGGNGQLGHGTL-ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369
Query: 366 YGWGMGNGYQLG-NGKEDDILN 386
Y WG YQLG G +D+ L+
Sbjct: 370 YTWGKNRDYQLGIPGLKDEQLD 391
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 185/414 (44%), Gaps = 79/414 (19%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTP-----LKLESVSGI---------------VKIASG 180
V+AWG R +HG +G E +K P LKL + +G+ V + G
Sbjct: 37 VWAWG--RGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCG 94
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H V+ + ++ G + G+LG T+ + + ++ P +KR +
Sbjct: 95 LFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYK------PYVNP---RIKRVQMASA-G 143
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G++N ++ G++ +G + LG E + P L++ + +++G
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERE-------LLPRLLEGPWKDRIVHVSAGG 196
Query: 301 HHSLALNSEGKIYAFGRHD-YGRLGLKNV----SEPVTEPTPIPSLQDKTITSIACGNCV 355
H+ A+ G++Y +GR + GRLG N ++ PT + +L D I + CG
Sbjct: 197 SHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFF 255
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKE------------DDI--------------LNSEG 389
+ A+ G L+ WG ++LG+G +D+ L +G
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDG 315
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
K+ +G G+LG + E EP + ++ DKT T IACG + AI G LY WG
Sbjct: 316 KVITWGYGGNGQLGHGTL-ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGK 374
Query: 450 GNGYQLG-NGKEDDILEPMKIEGKQ-LNNYT---VLQVASGGQHSV-ILAKPKP 497
YQLG G +D+ L+P+ ++ Q L+ T VL V+ G H V I+++PKP
Sbjct: 375 NRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPKP 428
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 30/327 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
V G+GD G+LG+ + + K + + + V GG+H + LTE G VYTWG
Sbjct: 106 VFVWGKGDGGRLGIDTEFNQYKPY-VNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAF 164
Query: 99 GALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAW----GSFRDSHG 152
GALG + + E +P+ + P K V +SAG SH+ A+ E G +Y W G R HG
Sbjct: 165 GALGHGSY-ERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHG 223
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVM-LTSRGNLLTAGCPEQGQLGRITQRS 211
+ + EG P K++++ + + F M LT G L + G +LG T+
Sbjct: 224 NPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTR-- 281
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
A+ + ++ LE +V L + G + ++ G ++ +G QLG E
Sbjct: 282 ANNWKPKVVAALE--DVTL----VQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLEN 335
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
K P ++++++DK T +A G + A+ G +Y +G++ +LG+ + +
Sbjct: 336 GKE-------PAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388
Query: 332 VTEPTPI---PSLQDKT---ITSIACG 352
+P + +L +KT + ++CG
Sbjct: 389 QLDPVLVQFPQALHEKTPVEVLGVSCG 415
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 37/247 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED---LDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V T G G G LG G ER+ + + D +V V GG HT +TE G++YTW
Sbjct: 154 GNVYTWGYGAFGALGHGS--YERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW 211
Query: 94 GCNDEGALGREAEGDSEFIPQ-TVNLPKKA-------VQISAGDSHSVALLEDGTVYAWG 145
G DEG GR G+ + + + ++ P K + G ++AL + G +++WG
Sbjct: 212 G-RDEGE-GRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWSWG 269
Query: 146 SFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ G + + K LE V+ +V++A G H LT G ++T G GQL
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVT-LVQVACGGFHAAALTQDGKVITWGYGGNGQL 328
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-----VFTG-VYNTFISSKGSILAFGL 258
G T LE G+ P + + D + G + I+ G + +G
Sbjct: 329 GHGT--------------LENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGK 374
Query: 259 NNYSQLG 265
N QLG
Sbjct: 375 NRDYQLG 381
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNL 118
K A +ED+ +V+V GG H LT+DGKV TWG G LG E E
Sbjct: 288 KVVAALEDV-TLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMA 346
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH-GSMGLKGEGI------------QKTP 165
K I+ G + + A+ E+G +Y WG RD G GLK E + +KTP
Sbjct: 347 DKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTP 406
Query: 166 LKLESVSGIVKIASGADHFVMLTSR 190
++ ++ ++ GA+H V + SR
Sbjct: 407 VE------VLGVSCGANHGVCIVSR 425
>gi|260812223|ref|XP_002600820.1| hypothetical protein BRAFLDRAFT_75889 [Branchiostoma floridae]
gi|229286110|gb|EEN56832.1| hypothetical protein BRAFLDRAFT_75889 [Branchiostoma floridae]
Length = 466
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 160/366 (43%), Gaps = 41/366 (11%)
Query: 9 LRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL 68
L +A +PS S A P L + GG V L G+ D GQL L V E + +DL
Sbjct: 105 LEPRAASPSPPQGPLSGA-PPLSLRPGGQV-LAVGENDCGQLAL---VDEHEIVKSEDDL 159
Query: 69 DN----------------VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI 112
D +V+V G +H+ LT +G+V+T G NDEG + R GD +
Sbjct: 160 DYEGRLLPTPVALPAGKIIVDVAAGALHSAFLTSEGEVWTCGNNDEGEVARPTAGDVDGH 219
Query: 113 PQTVNLPKK----AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL 168
T A +S GDS + L G ++ G RDS+G G +Q+ P
Sbjct: 220 RVTSTCLDASGLVAAAVSCGDSFTAILDTRGRLFWAGQLRDSNGVYYNIGPRLQEVPGWW 279
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA-SRNARRGMSFLEPGE 227
V+ KI++G +H +L + + G P+ GQLGRI R A R+++ L P
Sbjct: 280 APVT---KISTGGNHLAVLVAN-TIACCGAPDLGQLGRIRARRALKRSSKETALTLSPWT 335
Query: 228 VPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
DV G T I++ G I G NN QL G +T I+
Sbjct: 336 TA---SDFVDVCCGQNTTIGITAAGDIFGCGANNQCQLA-------LEGPQIIWTTTRIE 385
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+LS ++ +A G H +AL+S G+ YA+G +L + + P P+ L + I
Sbjct: 386 ALSQRQLVQVAMGDTHGIALSSTGQAYAWGSGVSNQLCVGKEVDRKEAPVPMVGLPARPI 445
Query: 347 TSIACG 352
I+ G
Sbjct: 446 LKISGG 451
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 136/340 (40%), Gaps = 54/340 (15%)
Query: 164 TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
TP+ L + IV +A+GA H LTS G + T G ++G++ R T + R + L
Sbjct: 168 TPVALPAGKIIVDVAAGALHSAFLTSEGEVWTCGNNDEGEVARPTAGDVDGH-RVTSTCL 226
Query: 224 EPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
+ + D FT + +T +G + G QL +++ G P
Sbjct: 227 DASGLVAAAVSCGDSFTAILDT----RGRLFWAG-----QLRDSNGVYYNIGPRLQEVPG 277
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-------LKNVSEPVTEPT 336
+ T +++G +H LA+ I G D G+LG LK S+ T T
Sbjct: 278 WWAPV-----TKISTGGNH-LAVLVANTIACCGAPDLGQLGRIRARRALKRSSKE-TALT 330
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
P + CG + I + G ++G G N QL L I+ R
Sbjct: 331 LSPWTTASDFVDVCCGQNTTIGITAAGDIFGCGANNQCQLA-------LEGPQIIWTTTR 383
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
I +L + + +A G+ A+ S G Y WG G QL
Sbjct: 384 --------------------IEALSQRQLVQVAMGDTHGIALSSTGQAYAWGSGVSNQLC 423
Query: 457 NGKEDDILE-PMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
GKE D E P+ + G L +L+++ GGQH ++L +P
Sbjct: 424 VGKEVDRKEAPVPMVG--LPARPILKISGGGQHVLVLVEP 461
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 107/279 (38%), Gaps = 39/279 (13%)
Query: 251 GSILAFGLNNYSQLGEADS-EVQKSGNTCFFTPHLIKSL----SDKKFTMLASGQHHSLA 305
G +LA G N+ QL D E+ KS + + L+ + + K +A+G HS
Sbjct: 131 GQVLAVGENDCGQLALVDEHEIVKSEDDLDYEGRLLPTPVALPAGKIIVDVAAGALHSAF 190
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS--IACGNCVSFAIDSEG 363
L SEG+++ G +D G + + L + + ++CG+ + +D+ G
Sbjct: 191 LTSEGEVWTCGNNDEGEVARPTAGDVDGHRVTSTCLDASGLVAAAVSCGDSFTAILDTRG 250
Query: 364 VLYGWGM---GNG--YQLG-----------------NGKEDDILNSEGKIYAFGRHDYGR 401
L+ G NG Y +G G + I G D G+
Sbjct: 251 RLFWAGQLRDSNGVYYNIGPRLQEVPGWWAPVTKISTGGNHLAVLVANTIACCGAPDLGQ 310
Query: 402 LG-------LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
LG LK S+ T T P + CG + I + G ++G G N Q
Sbjct: 311 LGRIRARRALKRSSKE-TALTLSPWTTASDFVDVCCGQNTTIGITAAGDIFGCGANNQCQ 369
Query: 455 LGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
L I +IE L+ ++QVA G H + L+
Sbjct: 370 LALEGPQIIWTTTRIEA--LSQRQLVQVAMGDTHGIALS 406
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 58/362 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +A G + +T +G + ++G GQLG S G++ ++ + K
Sbjct: 34 IRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGL-----GSLKEVEGITLIDS----IPEK 84
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS--DK 291
I ++ F++ +G + + G +LG + TP L++SL+ ++
Sbjct: 85 VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRME------TPQLVESLAREEE 138
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS------EPV-------TEPTPI 338
K +A+G S+AL+ GK+Y+FG + G LG V EP T P I
Sbjct: 139 KIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLI 198
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------- 384
+L+ + + I+CG+ +FAI+ EGV +GWG G + E +
Sbjct: 199 RALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPGPWK 258
Query: 385 -----------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT---ITSIAC 430
L G+++A+G + +G LG+ EP + L + I IA
Sbjct: 259 QIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAA 318
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+DSEG +Y WG G+ LG G+E+D EP+ I+ +Q V ++ +G +++
Sbjct: 319 GWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYAI 378
Query: 491 IL 492
+
Sbjct: 379 AV 380
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 32/339 (9%)
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
+V L N + +V G T+ +T+ G+VY+ G G LG + + E I ++P+K
Sbjct: 25 IVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLIDSIPEK 84
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS----GIVKI 177
+ +AGD HS+ + E G +Y+ G + +G ++ TP +ES++ I+K+
Sbjct: 85 VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRME-TPQLVESLAREEEKIIKV 143
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR---------ITQRSASRNARRGMSFLEPGEV 228
A+G + L+ G + + G G LG + RN +
Sbjct: 144 AAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIR---- 199
Query: 229 PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+++ ++ + G + F I+ +G +G Y D+EV F HL
Sbjct: 200 ALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFA-TDNEVNWEQPQALF--HL--- 253
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-- 345
+ + SG H+L L G+++A+G + +G LG+ EP + L +
Sbjct: 254 --PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKE 311
Query: 346 -ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
I IA G S A+DSEG +Y WG G+ LG G+E+D
Sbjct: 312 PIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEED 350
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 47/269 (17%)
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ E SG T + P ++ SL +K +A GQ +L + +G++Y+ G YG+LGL +
Sbjct: 9 EYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGS 68
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-------- 379
+ E V T I S+ +K IT A G+ S + +G LY G G +LG G
Sbjct: 69 LKE-VEGITLIDSIPEKVITC-AAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMET 126
Query: 380 ---------KEDDI------------LNSEGKIYAFGRHDYGRLGLKNVS------EPV- 411
+E+ I L+ GK+Y+FG + G LG V EP
Sbjct: 127 PQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFH 186
Query: 412 ------TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
T P I +L+ + + I+CG+ +FAI+ EGV +GWG G + E + +
Sbjct: 187 SHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQ 246
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P + L Q+ SGG H++ L K
Sbjct: 247 PQAL--FHLPG-PWKQIVSGGAHTLGLTK 272
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL----DNVVEVVVGGMHTVCLTEDGKVYT 92
G + +CG G G+LGLG +T LVE L + +++V G ++ L+E GKVY+
Sbjct: 102 GHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYS 161
Query: 93 WGCNDEGALGR-------------EAEGDSEFIPQTVN-LPKKAVQ-ISAGDSHSVALLE 137
+G ++G LG + + E P+ + L K+ ++ IS G H+ A+ +
Sbjct: 162 FGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINK 221
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK-IASGADHFVMLTSRGNLLTA 196
+G + WG R + E + P L + G K I SG H + LT G +
Sbjct: 222 EGVAFGWGCGR--YHCFATDNEVNWEQPQALFHLPGPWKQIVSGGAHTLGLTKGGQVWAW 279
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G G LG QR++ R L+ + P++ F+ + S+G + ++
Sbjct: 280 GVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFS----MAVDSEGYVYSW 335
Query: 257 GLNNYSQLGEADSE 270
G + LG + E
Sbjct: 336 GRGHAGALGTGEEE 349
>gi|375013355|ref|YP_004990343.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Owenweeksia hongkongensis DSM 17368]
gi|359349279|gb|AEV33698.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Owenweeksia hongkongensis DSM 17368]
Length = 460
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 173/347 (49%), Gaps = 34/347 (9%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
+KCK G T G D GQLG+G E TF V L + +V G HT+ L G
Sbjct: 31 VKCKDG--YAYTAGYNDKGQLGIGSSSSEF-TFTQVAGLSLITDVAAGAEHTLALDTGGN 87
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
V+ WG N G L ++ + +P V K + ISAG S+ L ED TV+A G +
Sbjct: 88 VWAWGDNSYGQL-CDSSYVNRIMPHRVAGADKILSISAGWRFSLYLREDSTVWAGG--EN 144
Query: 150 SHGSMGLKGEGIQKTPLK-LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
++G +G + L+ + ++S ++ I++G +H ++L + G++ + G GQLG T
Sbjct: 145 TNGQVGTQSPPYSVNYLRQISNLSDVIAISAGFNHCLVLEADGSVWSWGFNSYGQLGDGT 204
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVF---TGVYNTF-ISSKGSILAFGLNNYSQL 264
++ +P++ + ++ + G ++ I + G++ ++G N + QL
Sbjct: 205 TNTSI--------------IPVQVQGLNSIVAIEAGWSVSYAIKNDGTLWSWGANYHGQL 250
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + SG T +P L+ L +M+ S +LAL +G ++A+G++ +G+LG
Sbjct: 251 GTG--SLMGSGVTS--SPQLVVGL--DSVSMIRSDVDFTLALKEKGSLWAWGKNFHGQLG 304
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++ PT + +L ++ + G+ V +AI+S G +Y WG G
Sbjct: 305 DSTKADR-NIPTKVKNL--GSVVDVGVGSAVGYAINSVGEIYSWGAG 348
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 159/358 (44%), Gaps = 55/358 (15%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
KA +I G H + +DG YA+ + + G +G+ + T ++ +S I +A+G
Sbjct: 18 KAQRIDGGGGHGIVKCKDG--YAYTAGYNDKGQLGIGSSSSEFTFTQVAGLSLITDVAAG 75
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
A+H + L + GN+ G GQL S R M P V K +
Sbjct: 76 AEHTLALDTGGNVWAWGDNSYGQL------CDSSYVNRIM----PHRVAGADKILSISAG 125
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD-KKFTMLASG 299
++ ++ ++ A G N Q+G ++ + ++ +S+ +++G
Sbjct: 126 WRFSLYLREDSTVWAGGENTNGQVGTQSPP---------YSVNYLRQISNLSDVIAISAG 176
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+H L L ++G ++++G + YG+LG + + P + L +I +I G VS+AI
Sbjct: 177 FNHCLVLEADGSVWSWGFNSYGQLGDGTTNTSII-PVQVQGLN--SIVAIEAGWSVSYAI 233
Query: 360 DSEGVLYGWGMGNGYQLGNGK----------------------EDDI-----LNSEGKIY 392
++G L+ WG QLG G D+ L +G ++
Sbjct: 234 KNDGTLWSWGANYHGQLGTGSLMGSGVTSSPQLVVGLDSVSMIRSDVDFTLALKEKGSLW 293
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
A+G++ +G+LG ++ PT + +L ++ + G+ V +AI+S G +Y WG G
Sbjct: 294 AWGKNFHGQLGDSTKADR-NIPTKVKNL--GSVVDVGVGSAVGYAINSVGEIYSWGAG 348
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 52/284 (18%)
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
+I G H ++ G TAG ++GQLG + S +F + + L I
Sbjct: 21 RIDGGGGHGIVKCKDGYAYTAGYNDKGQLGIGSSSSE-------FTFTQVAGLSL----I 69
Query: 236 DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
DV G +T + + G++ A+G N+Y QL ++ S V + PH + +DK +
Sbjct: 70 TDVAAGAEHTLALDTGGNVWAWGDNSYGQLCDS-SYVNR------IMPHRVAG-ADKILS 121
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+++G SL L + ++A G + G++G ++ V I +L D S +C
Sbjct: 122 -ISAGWRFSLYLREDSTVWAGGENTNGQVGTQSPPYSVNYLRQISNLSDVIAISAGFNHC 180
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 414
+ +L ++G ++++G + YG+LG + + P
Sbjct: 181 L----------------------------VLEADGSVWSWGFNSYGQLGDGTTNTSII-P 211
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ L +I +I G VS+AI ++G L+ WG QLG G
Sbjct: 212 VQVQGLN--SIVAIEAGWSVSYAIKNDGTLWSWGANYHGQLGTG 253
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 42/225 (18%)
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N+ QLG S + FT + LS T +A+G H+LAL++ G ++A+G
Sbjct: 42 GYNDKGQLGIGSSSSE-------FTFTQVAGLS--LITDVAAGAEHTLALDTGGNVWAWG 92
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
+ YG+L S V P I SI+ G S LY
Sbjct: 93 DNSYGQL---CDSSYVNRIMPHRVAGADKILSISAGWRFS--------LY---------- 131
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
L + ++A G + G++G ++ V I +L D S +C
Sbjct: 132 --------LREDSTVWAGGENTNGQVGTQSPPYSVNYLRQISNLSDVIAISAGFNHC--L 181
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
++++G ++ WG + QLG+G + + P++++G LN+ ++
Sbjct: 182 VLEADGSVWSWGFNSYGQLGDGTTNTSIIPVQVQG--LNSIVAIE 224
>gi|429964945|gb|ELA46942.1| hypothetical protein VCUG_01561 [Vavraia culicis 'floridensis']
Length = 356
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 39/355 (10%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKT---FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
V T G QLG G + AL ++ V +V G +HT+ L+E G +Y++G
Sbjct: 2 AVYTFGSNLLSQLGTGEEPGHSSKPLELALFSEM-KVDKVCCGSLHTLILSE-GIIYSFG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
CNDE ALGR+ + E +P + +P+ + I AG S S + + G +Y WG+FRD G +
Sbjct: 60 CNDEFALGRDGD---ENVPLRIEVPEPVIHIGAGQSSSFCVGKSGKLYGWGTFRDKSGVI 116
Query: 155 GLKG-EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
G + + QK P+ L G VK+ + + ++ + RG + G E G+ G +R
Sbjct: 117 GFRANKKFQKAPVVLH--RGPVKLLAVGSNHILYSVRGEVYALGANEFGEKGVYKRRRMG 174
Query: 214 RNARRGMSFLEPGEVPLKRKHI---DDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD- 268
R++ G P V +R +F G +F +S KG AFG N QLG D
Sbjct: 175 RSSELG-----PVLVANRRSRYSKCSKMFCGTSTSFMVSEKGEAFAFGQNGNGQLGLGDK 229
Query: 269 -SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
S + K +++ + ++ G+ H+L + K+YA G + +G+LG K+
Sbjct: 230 MSGISK------------RTVPLEHIHGISGGEVHTLFTTKDKKLYAAGHNMFGQLGTKD 277
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ + + + + S A +G +Y WG + + G +D
Sbjct: 278 NA----DRDSLTHIDLANVRMARTKGFFSVAYTDDG-MYSWGFNSHGECGYAGQD 327
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 49/241 (20%)
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ FG N SQLG + S P + S+ K + G H+L L SEG
Sbjct: 2 AVYTFGSNLLSQLGTGEEPGHSS------KPLELALFSEMKVDKVCCGSLHTLIL-SEGI 54
Query: 312 IYAFGRHD---YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
IY+FG +D GR G +NV + P P+ I G SF + G LYGW
Sbjct: 55 IYSFGCNDEFALGRDGDENVPLRIEVPEPV--------IHIGAGQSSSFCVGKSGKLYGW 106
Query: 369 GMGN------GYQ-------------------LGNGKEDDILNSEGKIYAFGRHDYGRLG 403
G G++ L G + + G++YA G +++G G
Sbjct: 107 GTFRDKSGVIGFRANKKFQKAPVVLHRGPVKLLAVGSNHILYSVRGEVYALGANEFGEKG 166
Query: 404 L--KNVSEPVTEPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ + +E P+ ++ + + CG SF + +G + +G QLG
Sbjct: 167 VYKRRRMGRSSELGPVLVANRRSRYSKCSKMFCGTSTSFMVSEKGEAFAFGQNGNGQLGL 226
Query: 458 G 458
G
Sbjct: 227 G 227
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G GQ GQLGLG + + ++T L+++ + G +HT+ T+D K+Y G
Sbjct: 211 GEAFAFGQNGNGQLGLGDKMSGISKRTVP----LEHIHGISGGEVHTLFTTKDKKLYAAG 266
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
N G LG + D + + ++L + + G SVA +DG +Y+WG +SHG
Sbjct: 267 HNMFGQLGTKDNADRDSLTH-IDLANVRMARTKG-FFSVAYTDDG-MYSWGF--NSHGEC 321
Query: 155 GLKGEGIQKTPLKLE-SVSGIVKIASGADHFVMLT 188
G G+ P K+E IV G D V++T
Sbjct: 322 GYAGQD-SNAPKKMEIDFEEIVSFDVGHDFCVVVT 355
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 160/395 (40%), Gaps = 56/395 (14%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
VYT+G N LG E P + L K ++ G H++ +L +G +Y++G
Sbjct: 3 VYTFGSNLLSQLGTGEEPGHSSKPLELALFSEMKVDKVCCGSLHTL-ILSEGIIYSFGC- 60
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ L +G + PL++E ++ I +G + G L G + G I
Sbjct: 61 ---NDEFALGRDGDENVPLRIEVPEPVIHIGAGQSSSFCVGKSGKLYGWGTFRD-KSGVI 116
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
R+ + + V L R + + G + S +G + A G N + + G
Sbjct: 117 GFRANKK--------FQKAPVVLHRGPVKLLAVGSNHILYSVRGEVYALGANEFGEKGVY 168
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDK--KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
++ G + P L+ + + K + + G S ++ +G+ +AFG++ G+LGL
Sbjct: 169 KR--RRMGRSSELGPVLVANRRSRYSKCSKMFCGTSTSFMVSEKGEAFAFGQNGNGQLGL 226
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+ +++ T +P ++G G + L K+
Sbjct: 227 GDKMSGISKRT-VPLEH----------------------IHGISGGEVHTLFTTKDK--- 260
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
K+YA G + +G+LG K+ + + + + + S A +G +Y
Sbjct: 261 ----KLYAAGHNMFGQLGTKDNA----DRDSLTHIDLANVRMARTKGFFSVAYTDDG-MY 311
Query: 446 GWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTV 479
WG + + G G++ + + M+I+ +++ ++ V
Sbjct: 312 SWGFNSHGECGYAGQDSNAPKKMEIDFEEIVSFDV 346
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 155/354 (43%), Gaps = 29/354 (8%)
Query: 13 AENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLGP-DVMERKTFAL 64
AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 23 AENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEF-IPQTVNLPKKA 122
+ V G HT+ TE GKVY G N+EG LG + E S F + +K
Sbjct: 83 ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKI 142
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
Q+SAG + S AL EDG ++ WG +S G +GL+ P ++ I I+ G
Sbjct: 143 KQLSAGSNTSAALTEDGELFMWGD--NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYY 200
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H +T+ G L T G PE G+LG Q + P VP + V G
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM--------PQPVPGIPGKVVQVACGG 252
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+T + ++ ++ FGL + QLG + S P I+ + D+K + +A G++H
Sbjct: 253 GHTVVLTEKAVYTFGLGQFGQLGLGTFLFETS------VPKAIEHIKDQKISFIACGENH 306
Query: 303 SLALNSEGKIYAF--GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ + G +Y F GRH LGL+N + PT + + ++CG C
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFI-PTLCSNFLRFIVQLVSCGGC 359
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 167/378 (44%), Gaps = 55/378 (14%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGAD 182
+S GD H+ + + +Y +GS ++ G +GL + P ++++ + A G +
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGS--NNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H ++ T G + AG +GQLG + R+ +SF ++ I + G
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLG--LGDTEERSTFHLISFFT------SQRKIKQLSAGS 149
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ ++ G + +G N+ Q+G ++ N C P + K + ++ G +
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIG-----LENVTNVC--VPQQVT--VGKPISWISCGYY 200
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
HS + +EG++Y FG + G+LGL N V+ + P P+P + K + +ACG
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM--PQPVPGIPGK-VVQVACG------ 251
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
G +L +E +Y FG +G+LGL + P I
Sbjct: 252 --------------------GGHTVVL-TEKAVYTFGLGQFGQLGLGTFLFETSVPKAIE 290
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
++D+ I+ IACG + I G++Y +G G +LG G E+ + + +
Sbjct: 291 HIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI 350
Query: 479 VLQVASGGQHSVILAKPK 496
V V+ GG H+++ A P+
Sbjct: 351 VQLVSCGGCHTLVFATPR 368
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 33/316 (10%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVA 134
G HT +T + K+Y +G N+ G LG ++ P V P+K + G +H++
Sbjct: 43 GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNHTLV 101
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV----SGIVKIASGADHFVMLTSR 190
E G VYA G ++ G +GL G+ +++ L S I ++++G++ LT
Sbjct: 102 STEGGKVYAAGG--NNEGQLGL-GDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 191 GNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FI 247
G L G +GQ+G +T + G K I + G Y++ F+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTVG-------------KPISWISCGYYHSAFV 205
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+++G + FG +LG + + P + + K +A G H++ L
Sbjct: 206 TTEGQLYTFGEPECGKLGLPNQLLVNHR-----MPQPVPGIPGK-VVQVACGGGHTVVL- 258
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+E +Y FG +G+LGL + P I ++D+ I+ IACG + I G++Y
Sbjct: 259 TEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYT 318
Query: 368 WGMGNGYQLGNGKEDD 383
+G G +LG G E+
Sbjct: 319 FGDGRHGKLGLGLENS 334
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 42/233 (18%)
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
T L+ G H+ + K+Y FG +++G+LGL + S V++PT + +L+ + + ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST-VSKPTCVKALKPEKVKFAACGR 96
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------ILN 386
+ G +Y G N QLG G ++ L
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+G+++ +G + G++GL+NV+ P K I+ I+CG S + +EG LY
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVC---VPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 447 WGMGNGYQLGNGKEDDILEPMK-----IEGKQLNNYTVLQVASGGQHSVILAK 494
+G +LG + + M I GK V+QVA GG H+V+L +
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMPQPVPGIPGK------VVQVACGGGHTVVLTE 260
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
V T G G GQLGLG + E +E + + + + G HT +T+ G +YT+G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 97 DEGALGREAEGDS-EFIPQTV-NLPKKAVQ-ISAGDSHSVAL 135
G LG E + +FIP N + VQ +S G H++
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 187/437 (42%), Gaps = 70/437 (16%)
Query: 35 GGGVVLTCGQGDTGQL-GLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G G GQL G G ++ L L +VV G + + +G V
Sbjct: 3018 GKSDVYLWGNGRYGQLAGTGTNL---TVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAV 3074
Query: 94 GCNDEGALGREAEGDSE--FIPQTVN-----LPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G EG GR +G+S+ ++P ++ + + V D HS+AL E G V++WG
Sbjct: 3075 G---EGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGD 3131
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G +G Q+ P ++E++ G +V++A G H ++T+ G L T G E G+L
Sbjct: 3132 --GDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRL 3189
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG--SILAFGLNNYS 262
G QRS S L L+ H+ V G+ +T + S ++ AFG +Y
Sbjct: 3190 G---QRSTSNK------MLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYG 3240
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG S T + P ++ L +K + G S+ + +G +Y FG+
Sbjct: 3241 KLGAGSS-------TAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIG 3293
Query: 323 LG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
L LKN S P +PSL+ I IA G A+ S G +Y WG
Sbjct: 3294 LPDSMLKNRSNPQV----VPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGC--------- 3340
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
NSEG+ LGL + + PV EPT I +LQ K I I+ G C S A
Sbjct: 3341 ------NSEGQ-----------LGLGHCN-PVKEPTLITALQGKNIKQISAGRCHSSAWT 3382
Query: 440 SEGVLYGWGMGNGYQLG 456
+ G QLG
Sbjct: 3383 TPSTSKNSGGPGNLQLG 3399
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 32/344 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM----HTVCLTEDGKVYT 92
G V CG+G G+LGLG + LV + ++ V HT+ +T DG+V++
Sbjct: 431 GSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFS 490
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLP---KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG + G LG ++ P+ + P K V SAG HS A+ +DG +Y WG
Sbjct: 491 WGDGEYGKLGHGNSATQKY-PKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWG--EG 547
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN-LLTAGCPEQGQLGRIT 208
G +G + P ++ +SG+ ++A G+ H + + G + + G + G+LG
Sbjct: 548 DFGRLGHSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH-- 605
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
N +E + RK V G ++ ++S G + A+G S LG
Sbjct: 606 ---GDTNRVYRPKVIEALHGFIIRK----VCAGSQSSLALTSAGQVFAWGCG--SCLGCG 656
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
SE T P ++ LS K ++ G H LAL+ E ++YA+G + G+ G +
Sbjct: 657 SSE------TTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGH 710
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSF---AIDSEGVLYGW 368
S P+T P + L+ +I I G S A+ ++ L W
Sbjct: 711 TSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 176/411 (42%), Gaps = 63/411 (15%)
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
VY WG N L AEG E +P+ A I AG + ++ DG+V A G
Sbjct: 383 VYVWGSNSSHQL---AEGTLEKILLPKLTQGFSDAQTIEAGQYCTFSVSTDGSVKACG-- 437
Query: 148 RDSHGSMGLKGEGIQKTP--LKLESVSGIVKIAS--GAD-HFVMLTSRGNLLTAGCPEQG 202
+ S+G +GL Q P L LE I K++S G+D H + +T G + + G E G
Sbjct: 438 KGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYG 497
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNY 261
+LG SA++ + + + PL K + G ++ ++ G + +G ++
Sbjct: 498 KLGH--GNSATQKYPKII------QGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDF 549
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK-IYAFGRHDY 320
+LG +DS+ + P L+K +S +A G H++A+ +G+ +++FG D
Sbjct: 550 GRLGHSDSQSRN-------MPTLVKDISG--VGQVACGSSHTIAVAQDGRTVWSFGGGDN 600
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
G+LG + + V P I +L I + G+ S A+ S G ++ WG G+ G+ +
Sbjct: 601 GKLGHGDTNR-VYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSE 659
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+ P + L I I+CG+ A+
Sbjct: 660 TTSL----------------------------RPRFVEDLSITKIIDISCGDSHCLALSH 691
Query: 441 EGVLYGWGMGNGYQLGNGKEDD-ILEPMKIEGKQLNNYTVLQVASGGQHSV 490
E +Y WG Q G G I P K+ G L ++ Q+ +G HS+
Sbjct: 692 ENEVYAWGNNTMGQCGQGHTSTPITRPKKVLG--LEGVSIQQITAGTSHSL 740
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 169/385 (43%), Gaps = 52/385 (13%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
VY WG+ R +G + G + P S+S ++ G + ++ S G + G
Sbjct: 3022 VYLWGNGR--YGQLAGTGTNL-TVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAVG--- 3075
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
+GQ GR+ Q + + + + + + + + + ++ ++ G + ++G +
Sbjct: 3076 EGQYGRLGQ--GNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3133
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
+ +LG ++E Q+ P I++L + LA G HS + ++GK++ FG +
Sbjct: 3134 FGKLGHGNNERQRR-------PKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGES 3186
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV-LYGWGMGNGYQLGNG 379
GRLG ++ S + P + +L+ + ++CG + + +G+ ++ +G G+ +LG G
Sbjct: 3187 GRLGQRSTSNKML-PERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAG 3245
Query: 380 ---------KEDDILNS-----------------EGKIYAFGRHDYGRLG---LKNVSEP 410
K + + N +G +Y FG+ L LKN S P
Sbjct: 3246 SSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNP 3305
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+PSL+ I IA G A+ S G +Y WG + QLG G + + EP I
Sbjct: 3306 QV----VPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLIT 3361
Query: 471 GKQLNNYTVLQVASGGQHSVILAKP 495
Q N + Q+++G HS P
Sbjct: 3362 ALQGKN--IKQISAGRCHSSAWTTP 3384
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G + +R+ +E L ++VV++ G H+ +T DGK++
Sbjct: 3121 TETGEVFSWGDGDFGKLGHGNNERQRRP-KQIEALQGEDVVQLACGFRHSAVVTADGKLF 3179
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDG-TVYAWGSFRD 149
T+G + G LG+ + + + L V Q+S G +H++ L DG V+A+G
Sbjct: 3180 TFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGD--G 3237
Query: 150 SHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G + P K+E + G+ K+ GA V++ G++ T G ++ +G
Sbjct: 3238 DYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG--QERLIGLP 3295
Query: 208 TQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
+R+ P VP L+ I+D+ G + +SS G + A+G N+ QLG
Sbjct: 3296 DSMLKNRS--------NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLG 3347
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
K P LI +L K +++G+ HS A +
Sbjct: 3348 LGHCNPVKE-------PTLITALQGKNIKQISAGRCHSSAWTT 3383
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTE 86
T+ G V + G GD G+LG G D ++E L + +V G ++ LT
Sbjct: 582 TIAVAQDGRTVWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTS 640
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAW 144
G+V+ WGC LG + + P+ V K + IS GDSH +AL + VYAW
Sbjct: 641 AGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAW 698
Query: 145 GSFRDSHGSMGLKGEGIQKTP-------LKLESVSGIVKIASGADHFVMLTS 189
G + +MG G+G TP L LE VS I +I +G H + T+
Sbjct: 699 G-----NNTMGQCGQGHTSTPITRPKKVLGLEGVS-IQQITAGTSHSLAWTA 744
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK-VYT 92
T G + T G+GD G+LG D R LV+D+ V +V G HT+ + +DG+ V++
Sbjct: 536 TKDGELYTWGEGDFGRLG-HSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWS 594
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSFRDS 150
+G D G LG + + + P+ + + ++ AG S+AL G V+AWG
Sbjct: 595 FGGGDNGKLG-HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC---- 649
Query: 151 HGS-MGL-KGEGIQKTPLKLE--SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
GS +G E P +E S++ I+ I+ G H + L+ + G GQ G+
Sbjct: 650 -GSCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQ 708
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTE 86
TL G V G GD G+LG G + VE L N + +V G +V +
Sbjct: 3221 TLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYP-QKVEQLCNKGMKKVCCGAQFSVVVAC 3279
Query: 87 DGKVYTWGCNDEGALG-----REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
DG VYT+G E +G + + + +P L + I+ G H +AL G V
Sbjct: 3280 DGHVYTFG--QERLIGLPDSMLKNRSNPQVVPSLEGLFIE--DIAVGCEHVLALSSTGDV 3335
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCP 199
YAWG +S G +GL K P + ++ G I +I++G H T+ +G P
Sbjct: 3336 YAWGC--NSEGQLGLGHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGP 3393
Query: 200 EQGQLG 205
QLG
Sbjct: 3394 GNLQLG 3399
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYT 92
G G L CG +T L R F VEDL ++++ G H + L+ + +VY
Sbjct: 648 GCGSCLGCGSSETTSL--------RPRF--VEDLSITKIIDISCGDSHCLALSHENEVYA 697
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAV--------QISAGDSHSVALLE---DGTV 141
WG N G G +G + + PKK + QI+AG SHS+A D +
Sbjct: 698 WGNNTMGQCG---QGHTS---TPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQL 751
Query: 142 YAW 144
AW
Sbjct: 752 VAW 754
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 182/415 (43%), Gaps = 67/415 (16%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV 133
+ GG + + +G+V++WG N G LGR S+ P +L AV IS G+ H++
Sbjct: 226 LAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLINDAVSISLGEYHAI 285
Query: 134 ALLEDGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESV--SGI--VKIASGADHFVM 186
AL DG V G RD +G +G G P +++ +GI V + +G H +
Sbjct: 286 ALTNDGRVVTLG--RDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSLA 343
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV---- 242
LTS G + G + GQLG T P E P + DV
Sbjct: 344 LTSEGTVYAWGRNDVGQLGLGT-------------ITAPQESPALIPGLSDVIALAAGDD 390
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ + + GS+ A+G N +LG D T + P + +L K +A+G +H
Sbjct: 391 HTLALKADGSVWAWGDNPNGELGTGDI-------TPYSVPTAVSNLPGVK--AIAAGGNH 441
Query: 303 SLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
S+AL ++G + +G +++G+LG N + V P P+ L D + IA G + A+ S
Sbjct: 442 SVALLADGTVRTWGYNNHGQLGNGSNTNSNV--PVPVTGLTD--VVGIAAGYEFTLAVLS 497
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
G + WG + +QLGNG + + PV + IP+
Sbjct: 498 NGSVKAWGHDDSFQLGNGATT----------------------GDQTTPV-DVQGIPT-- 532
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED--DILEPMKIEGKQL 474
+++ + G + A+ +G + WG QLG+G + D +P+ I G Q+
Sbjct: 533 GRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGTPNSSDTAKPVSITGVQV 587
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 160/359 (44%), Gaps = 39/359 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G GQLG T +++ V + +G H + LT DG+V T G +
Sbjct: 240 GQVWSWGDNTYGQLGRATTSPSDSTPTQASLINDAVSISLGEYHAIALTNDGRVVTLGRD 299
Query: 97 DEGALGREAEGDSEFIPQTVNLPK-------KAVQISAGDSHSVALLEDGTVYAWGSFRD 149
D G LG + GDS NL KAV + AG HS+AL +GTVYAWG R+
Sbjct: 300 DYGQLG-DGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYAWG--RN 356
Query: 150 SHGSMGLKG-EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL Q++P + +S ++ +A+G DH + L + G++ G G+L
Sbjct: 357 DVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHTLALKADGSVWAWGDNPNGEL---- 412
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQL 264
G + P VP ++ V G ++ + + G++ +G NN+ QL
Sbjct: 413 ----------GTGDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVRTWGYNNHGQL 462
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G NT P + L+D +A+G +LA+ S G + A+G D +LG
Sbjct: 463 GNGS-------NTNSNVPVPVTGLTD--VVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLG 513
Query: 325 LKNVSEPVTEPTPIPSLQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ T P + + +++ + G + A+ +G + WG QLG+G +
Sbjct: 514 NGATTGDQTTPVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGTPN 572
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 166/354 (46%), Gaps = 49/354 (13%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ-KTPLKLESVSGIVKIAS 179
+A ++AG S A+ +G V++WG +++G +G TP + ++ V I+
Sbjct: 222 RANTLAAGGYFSAAIKPNGQVWSWGD--NTYGQLGRATTSPSDSTPTQASLINDAVSISL 279
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + LT+ G ++T G + GQLG S+ + L +P K + V
Sbjct: 280 GEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPN---LRDNILPAGIKAV-AVQ 335
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G Y++ ++S+G++ A+G N+ QLG + +P LI LSD LA+
Sbjct: 336 AGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQE------SPALIPGLSD--VIALAA 387
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H+LAL ++G ++A+G + G LG +++ P + PT + +L + +IA G S A
Sbjct: 388 GDDHTLALKADGSVWAWGDNPNGELGTGDIT-PYSVPTAVSNLPG--VKAIAAGGNHSVA 444
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+ ++G + WG N QLGNG + NV P P+
Sbjct: 445 LLADGTVRTWGYNNHGQLGNGSNTN---------------------SNV------PVPVT 477
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMKIEG 471
L D + IA G + A+ S G + WG + +QLGNG D P+ ++G
Sbjct: 478 GLTD--VVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQTTPVDVQG 529
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 37/304 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV-------VEVVVGGMHTVCLTE 86
T G V+T G+ D GQLG GP T DN+ V V G H++ LT
Sbjct: 288 TNDGRVVTLGRDDYGQLGDGPG-DSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTS 346
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
+G VY WG ND G LG + P + + ++AGD H++AL DG+V+AWG
Sbjct: 347 EGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHTLALKADGSVWAWGD 406
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ +G +G P + ++ G+ IA+G +H V L + G + T G GQLG
Sbjct: 407 --NPNGELGTGDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVRTWGYNNHGQLGN 464
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKGSILAFGLNNY 261
+ ++ VP+ + DV G+ + + S GS+ A+G ++
Sbjct: 465 GSNTNS--------------NVPVPVTGLTDVV-GIAAGYEFTLAVLSNGSVKAWGHDDS 509
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSL-SDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
QLG + ++ TP ++ + + + L +G H+LAL +G + A+G +
Sbjct: 510 FQLGNGATTGDQT------TPVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQ 563
Query: 321 GRLG 324
G+LG
Sbjct: 564 GQLG 567
>gi|125972780|ref|YP_001036690.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
27405]
gi|256004969|ref|ZP_05429941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281416977|ref|ZP_06247997.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|385779304|ref|YP_005688469.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|419721626|ref|ZP_14248784.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
gi|419725441|ref|ZP_14252484.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|125713005|gb|ABN51497.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
gi|255991038|gb|EEU01148.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281408379|gb|EFB38637.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|316940984|gb|ADU75018.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|380771190|gb|EIC05067.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|380782322|gb|EIC11962.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
Length = 469
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 206/488 (42%), Gaps = 79/488 (16%)
Query: 21 FVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMH 80
F+ ++ G VVL GD+ + +M++ ++ DL + G+
Sbjct: 18 FLVVSLNTSIFAADGKNVVLGDVNGDSKINAIDVLLMKKYILKVINDLPS------DGVK 71
Query: 81 TVCLTEDGKV----YTWGCNDEGALGREAEGDSEFIP-QTVNLPKKAVQISAGDSHSVAL 135
+ DG++ +TW L + E P + N P +Q +G +HSV L
Sbjct: 72 AADVNADGQINSIDFTW-------LKKYMLKAVEKFPGEASNNPDAVIQFESGFAHSVLL 124
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
+DGTV+ G+ + G +GL P+ + +SGI +A+G +H + L G L
Sbjct: 125 KKDGTVWVLGN--NGKGQLGLPEVSAVNEPVMINGLSGIKSVAAGREHTLALQEDGTLWA 182
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLK-RKHIDDVFTGV---YNTFISSKG 251
G QL +R R +P+K H D + + + G
Sbjct: 183 WGNNYSLQLIEYMERDPDTKERFT-------SIPIKVETHSDIKYVAAKFSRTLIVKNDG 235
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++ + L + +A+ + P IK D K + +G H +AL +G
Sbjct: 236 TVWLYSLPPINTSSDAE-----------YMPWEIKGFGDIKMADIGTG--HIVALREDGT 282
Query: 312 IYAFGRHDYGRLG-----LKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
++ +G + +G+LG N+ + EP +L D I SIA G+ S A+ S+G +
Sbjct: 283 VWTWGENVWGQLGNGWQQHHNIHTYIYFEPNQAKNLSD--IVSIAAGDAHSVALKSDGTV 340
Query: 366 YGWGMGNGYQLGNGK-------------EDDI-----------LNSEGKIYAFGRHDYGR 401
+ WG +LGNG ED + L ++G ++ +G++ YG+
Sbjct: 341 WTWGSNFNGELGNGTTTYILEPKKVEGLEDIVAIDAGIGHTVALKADGTVWVWGKNSYGQ 400
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
LG + T P + L+ I +I G + A ++G ++ WG + QLG+G +
Sbjct: 401 LG-NGTTMRSTVPIQVEGLEG--IVAIQAGMECTIAYKNDGTVWAWGKNDFGQLGDGTFE 457
Query: 462 DILEPMKI 469
+IL P+K+
Sbjct: 458 NILRPVKV 465
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 137/322 (42%), Gaps = 51/322 (15%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN--ARRGMSFLEPGEVPLK 231
+++ SG H V+L G + G +GQLG + + SA G+S ++ V
Sbjct: 111 VIQFESGFAHSVLLKKDGTVWVLGNNGKGQLG-LPEVSAVNEPVMINGLSGIK--SVAAG 167
Query: 232 RKHIDDVFTGVYNTFISSKGSILAFGLNNYS-QLGEADSEVQKSGNTCFFTPHLIKSLSD 290
R+H + G++ A+G NNYS QL E + P +++ SD
Sbjct: 168 REH---------TLALQEDGTLWAWG-NNYSLQLIEYMERDPDTKERFTSIPIKVETHSD 217
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K+ +A+ +L + ++G ++ Y + S+ P I D + I
Sbjct: 218 IKY--VAAKFSRTLIVKNDGTVWL-----YSLPPINTSSDAEYMPWEIKGFGDIKMADIG 270
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G+ V A+ +G ++ WG QLGNG + N IY
Sbjct: 271 TGHIV--ALREDGTVWTWGENVWGQLGNGWQQH-HNIHTYIYF----------------- 310
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
EP +L D I SIA G+ S A+ S+G ++ WG +LGNG ILEP K+E
Sbjct: 311 --EPNQAKNLSD--IVSIAAGDAHSVALKSDGTVWTWGSNFNGELGNGTTTYILEPKKVE 366
Query: 471 GKQLNNYTVLQVASGGQHSVIL 492
G + ++ + +G H+V L
Sbjct: 367 GLE----DIVAIDAGIGHTVAL 384
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 33/261 (12%)
Query: 225 PGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
PG +K + V G ++ FI++ G +FG N+Y QLG ++ P
Sbjct: 34 PGTFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKA-------LVNPR 86
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 343
+K+L DK+ ++A G+ H+L + K+YAFG + +LG+K+ + +P + +L
Sbjct: 87 CVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNG 146
Query: 344 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------------- 383
+ ++ G S A+ ++G++Y WG QLG G++
Sbjct: 147 VQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGA 206
Query: 384 ----ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
+N++G +Y FG ++G+LG + +P+ +P +Q +TS+ACG + A+
Sbjct: 207 YHSAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVALT 265
Query: 440 SEGVLYGWGMGNGYQLGNGKE 460
+G Y +G G+ QLG G+
Sbjct: 266 CDGRAYSFGDGSQGQLGLGQR 286
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 166/363 (45%), Gaps = 32/363 (8%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLG--PDVMERKT 61
K ++N +V ++AV ++ C T G + G D GQLG G ++ +
Sbjct: 28 KFSDNLPGTFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRC 87
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK- 120
++D + V G HT+ T+D KVY +G N E LG ++ PQ V
Sbjct: 88 VKALKD-KRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNG 146
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ ++AG HS+AL G VY WGS HG +GL + +K P++L++ + I++
Sbjct: 147 VQVKALTAGADHSLALSAKGIVYLWGS--SEHGQLGLGRKKQRKLPVQLKTEGKAIAISA 204
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
GA H + + G L T G E G+LG A + R+ P +VP + + V
Sbjct: 205 GAYHSAYVNTDGVLYTFGETEHGKLG---TNLAPKKCRK------PSKVPDIQGLVTSVA 255
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
G +T ++ G +FG + QLG V +G PHLI+ + K +++
Sbjct: 256 CGGSHTVALTCDGRAYSFGDGSQGQLGLG-QRVTHAGR-----PHLIQMPTGVKMARVSA 309
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKN--VSEPVTEPTPIPSLQDKTITSIACGNCVS 356
GQ H+ L+ ++Y G +G+L L++ + P + L + ++CG C +
Sbjct: 310 GQSHTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHT 369
Query: 357 FAI 359
+
Sbjct: 370 LVL 372
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 35/199 (17%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G HS+ + + G+ ++FG +DYG+LG + ++ + P + +L+DK +ACG
Sbjct: 47 VACGDQHSVFITASGRTFSFGSNDYGQLGHGH-TKALVNPRCVKALKDKRAILVACGRSH 105
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
+ + + K+YAFG + +LG+K+ + +P
Sbjct: 106 TL--------------------------VATDDKKVYAFGINSEHQLGVKSSAAYHADPQ 139
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP--MKIEGKQ 473
+ +L + ++ G S A+ ++G++Y WG QLG G++ P +K EGK
Sbjct: 140 LVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGK- 198
Query: 474 LNNYTVLQVASGGQHSVIL 492
+ +++G HS +
Sbjct: 199 -----AIAISAGAYHSAYV 212
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 179/418 (42%), Gaps = 63/418 (15%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS--HSVALLEDGTVYAWGS 146
+ WG N G LG +S P V+LP ++ HSVAL GTV AWG
Sbjct: 55 TILAWGSNFFGELGNGTTTNSS-TPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLAWGD 113
Query: 147 FRDSHGSMGLKGEGIQK-TPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+SHG +G G G TP+ + +G+ +A+G DH V LTS G +L G GQ
Sbjct: 114 --NSHGQLG-DGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFGQ 170
Query: 204 L--GRITQRSASRNARRGMSFLEPGEVPL-KRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
L G + RS P V L + V G ++ ++S G++LA+G N
Sbjct: 171 LGDGTVVDRS------------TPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGN 218
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG+ + V +S TP + T +A+G +HS+AL S G + A+GR+
Sbjct: 219 PFGQLGDG-TVVDRS------TPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNF 271
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LG V + T PT + T +++A G S A+ + G + WG QLG+G
Sbjct: 272 FGQLGDGTVVDRST-PTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV-SFAI 438
+P+ TIT+I+ + S A+
Sbjct: 331 TTTTSSTPVSVT-------------------------LPAA--TTITAISARDSQHSVAM 363
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
S G WG QLG+G P+ + TV +A+G HS+ L P
Sbjct: 364 TSAGAALSWGRNLRGQLGDGTTTTRSTPVDVH--LPTGVTVTAIAAGDDHSLALTAPP 419
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 146/312 (46%), Gaps = 34/312 (10%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLE 137
H+V LT G V WG N G LG + G P V+LP A ++AG HSVAL
Sbjct: 98 HSVALTAAGTVLAWGDNSHGQLG-DGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTS 156
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTP--LKLESVSGIVKIASGADHFVMLTSRGNLLT 195
GTV AWG +S G +G + TP + L + + +A+GA H V LTS G +L
Sbjct: 157 AGTVLAWGG--NSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLA 214
Query: 196 AGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--GVYNTFISSKG 251
G GQL G + RS P V L G ++ ++S G
Sbjct: 215 WGGNPFGQLGDGTVVDRS------------TPVAVALPPSTTVTAVAAGGNHSVALTSAG 262
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
++LA+G N + QLG+ + V +S TP ++ + + +A+G+ HSLAL + G
Sbjct: 263 TVLAWGRNFFGQLGDG-TVVDRS------TPTVVSLPAGVTASAVAAGRIHSLALTTAGG 315
Query: 312 IYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCV-SFAIDSEGVLYGWG 369
+ A+G + +G+LG + +P+ TIT+I+ + S A+ S G WG
Sbjct: 316 VLAWGNNTFGQLGDGTTTTSSTPVSVTLPAA--TTITAISARDSQHSVAMTSAGAALSWG 373
Query: 370 MGNGYQLGNGKE 381
QLG+G
Sbjct: 374 RNLRGQLGDGTT 385
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNVVE 73
PS V + T G VL G GQLG G V++R T V V
Sbjct: 189 PSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQLGDG-TVVDRSTPVAVALPPSTTVTA 247
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSH 131
V GG H+V LT G V WG N G LG D P V+LP A ++AG H
Sbjct: 248 VAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRS-TPTVVSLPAGVTASAVAAGRIH 306
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI-ASGADHFVMLTSR 190
S+AL G V AWG+ G + L + + I I A + H V +TS
Sbjct: 307 SLALTTAGGVLAWGNNTFGQLGDGTTTTSSTPVSVTLPAATTITAISARDSQHSVAMTSA 366
Query: 191 GNLLTAGCPEQGQL--GRITQRS 211
G L+ G +GQL G T RS
Sbjct: 367 GAALSWGRNLRGQLGDGTTTTRS 389
>gi|389742775|gb|EIM83961.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 463
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 141/279 (50%), Gaps = 34/279 (12%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG----DSEFIPQTVNLPK---- 120
+ + +V GGMH++ L +GK+ + G ND ALGR+ +G D+ + +L +
Sbjct: 28 NGIEKVAAGGMHSLVLDSNGKIRSCGVNDSMALGRKTQGIPGKDNAELEAEFDLVEGLDG 87
Query: 121 -KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG------EGIQKTPLKLESVSG 173
+ I+A DS S+AL + G + AWGSF S G +G G + ++ T L S S
Sbjct: 88 FRTTFIAASDSCSIALSDKGELRAWGSF-SSDGILGFDGIREHAMKVLEPTALPAFSKSQ 146
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +A G DH + LT+ G + T G QLGR RR + L P +PL K
Sbjct: 147 ICSVACGEDHVLALTTFGTVYTWGNGVNFQLGRKIME------RRKANGLRPEPLPL--K 198
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDK 291
I V G +++F + KG + A+GLN Q G +++ K GN T P +++L+
Sbjct: 199 DIVLVAAGHHHSFAVDKKGVVYAWGLNQMRQCGVSNA---KGGNQSHVTAPTEVEALNPA 255
Query: 292 K-----FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
K + G+HH++ L G+++ GR D GRLGL
Sbjct: 256 KHDGARVIQIGRGEHHTIFLLDNGEVWGCGRADAGRLGL 294
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 39/265 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH-LIKSLSDKKFTMLASG 299
G+++ + S G I + G+N+ LG + N L++ L + T +A+
Sbjct: 37 GMHSLVLDSNGKIRSCGVNDSMALGRKTQGIPGKDNAELEAEFDLVEGLDGFRTTFIAAS 96
Query: 300 QHHSLALNSEGKIYAFGRHDY-GRLGLKNVSE---PVTEPTPIPSLQDKTITSIACGNCV 355
S+AL+ +G++ A+G G LG + E V EPT +P+ I S+ACG
Sbjct: 97 DSCSIALSDKGELRAWGSFSSDGILGFDGIREHAMKVLEPTALPAFSKSQICSVACGEDH 156
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
A+ + G +Y WG G +QLG KI + + GL+ P
Sbjct: 157 VLALTTFGTVYTWGNGVNFQLGR-----------KIMERRKAN----GLR--------PE 193
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-----NGKEDDILEPMKIE 470
P+P K I +A G+ SFA+D +GV+Y WG+ Q G G + + P ++E
Sbjct: 194 PLPL---KDIVLVAAGHHHSFAVDKKGVVYAWGLNQMRQCGVSNAKGGNQSHVTAPTEVE 250
Query: 471 G---KQLNNYTVLQVASGGQHSVIL 492
+ + V+Q+ G H++ L
Sbjct: 251 ALNPAKHDGARVIQIGRGEHHTIFL 275
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 36/209 (17%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL-------KNVSEPVTEPTPIPSLQDKTITS 348
+A+G HSL L+S GKI + G +D LG K+ +E E + L T
Sbjct: 33 VAAGGMHSLVLDSNGKIRSCGVNDSMALGRKTQGIPGKDNAELEAEFDLVEGLDGFRTTF 92
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
IA + S A+ +G L WG +S+G I F G++ +
Sbjct: 93 IAASDSCSIALSDKGELRAWGS--------------FSSDG-ILGFD-------GIREHA 130
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
V EPT +P+ I S+ACG A+ + G +Y WG G +QLG I+E K
Sbjct: 131 MKVLEPTALPAFSKSQICSVACGEDHVLALTTFGTVYTWGNGVNFQLGR----KIMERRK 186
Query: 469 IEG---KQLNNYTVLQVASGGQHSVILAK 494
G + L ++ VA+G HS + K
Sbjct: 187 ANGLRPEPLPLKDIVLVAAGHHHSFAVDK 215
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG-KEDDILEPMKIEGKQLNNYTVLQVA 483
I I+ G+ + A D G+LY WG G QLG G K ++ P ++ L + V+ +
Sbjct: 386 IVGISSGSRYNLAWDESGILYSWGEGVSNQLGLGPKTEEAHLPTRVHNTALKTWKVVGAS 445
Query: 484 SGGQHSVILAKPK 496
+GGQH ++L P+
Sbjct: 446 AGGQHVMLLGVPR 458
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 19/135 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED----LDNVVEVVVGGMHTVCLTEDGKVYT 92
G V T G G QLG +MER+ + L ++V V G H+ + + G VY
Sbjct: 164 GTVYTWGNGVNFQLGR--KIMERRKANGLRPEPLPLKDIVLVAAGHHHSFAVDKKGVVYA 221
Query: 93 WGCNDEGALGRE-----------AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
WG N G A + E + + + +QI G+ H++ LL++G V
Sbjct: 222 WGLNQMRQCGVSNAKGGNQSHVTAPTEVEALNPAKHDGARVIQIGRGEHHTIFLLDNGEV 281
Query: 142 YAWGSFRDSHGSMGL 156
WG R G +GL
Sbjct: 282 --WGCGRADAGRLGL 294
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 175/375 (46%), Gaps = 45/375 (12%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVYTWGC 95
V+ T G GD G+LG + + +V L V V GG HT + + G VYTWG
Sbjct: 4 VLATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGL 63
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
ND+G LG ++E +P V +P++ V +SAG H++ + E G+V+++G + G +G
Sbjct: 64 NDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGC--NGKGQLG 121
Query: 156 L-KGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
L K + + P ++S+ + +V +A+G +H + LT+ G + + G G+LG
Sbjct: 122 LGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGH-----G 176
Query: 213 SRNARR----GMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEA 267
S RR + FL + ++ V G +++ +S+ G +G + QLG
Sbjct: 177 SATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFG 236
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-- 325
E +G T P L S + +A G HSLAL G + A+G + G LG
Sbjct: 237 SDE-DLAGPTVL--PPLKGSTA-----AVACGSLHSLALQYGGHVLAWGTNQNGVLGQGH 288
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM--------------G 371
+ +P P+ +P + + IA G S A+ G LY WG G
Sbjct: 289 EKQQQP-KRPSKVPGV---SAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTG 344
Query: 372 NGYQLGNGKEDDILN 386
G QLG+G + D +
Sbjct: 345 TGGQLGHGNDFDYWS 359
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 152/367 (41%), Gaps = 71/367 (19%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+A G H + G + T G ++GQLG S ++ G+ PGEV + + +
Sbjct: 42 VACGGAHTAAVDDSGTVYTWGLNDKGQLGH-----DSEDSEVGL----PGEVAMPER-VV 91
Query: 237 DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ G Y+T + GS+ +FG N QLG V P L+KSL D K
Sbjct: 92 ALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVV------LVREPRLVKSLQDNKVVA 145
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV-------SEPVTEPTPIPSLQDKTITS 348
+A+G HSLAL + G++Y++G GRLG + S P + + + +
Sbjct: 146 VAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQ 205
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI------------------------ 384
++ G S A+ + G + WG G +QLG G ++D+
Sbjct: 206 VSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGSTAAVACGSLHSL 265
Query: 385 -LNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
L G + A+G + G LG + +P P+ +P + + IA G S A+
Sbjct: 266 ALQYGGHVLAWGTNQNGVLGQGHEKQQQP-KRPSKVPGV---SAEQIAAGWKHSAAVTGS 321
Query: 442 GVLYGWGM--------------GNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
G LY WG G G QLG+G + D P ++ L + VA G
Sbjct: 322 GKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDL--VACGMN 379
Query: 488 HSVILAK 494
H+ + +
Sbjct: 380 HTAAIVE 386
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 41/305 (13%)
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
R L T G + G+LG + ++ R + L VPLK G + +
Sbjct: 2 RRVLATFGNGDCGRLGHSLEYASEELPRVVRALLG---VPLKAV----ACGGAHTAAVDD 54
Query: 250 KGSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
G++ +GLN+ QLG DSEV G ++ L++G +H+L +
Sbjct: 55 SGTVYTWGLNDKGQLGHDSEDSEVGLPGEVAM----------PERVVALSAGYYHTLCVG 104
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G +++FG + G+LGL V EP + SLQD + ++A G S A+ + G +Y
Sbjct: 105 ESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYS 164
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
WG +LG+G A R +G S P + + + +
Sbjct: 165 WGNAANGRLGHGS------------ATPRRLFG-------SSIEFLPRLVRAFEALRVEQ 205
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQ 487
++ G S A+ + G + WG G +QLG G ++D+ P + L T VA G
Sbjct: 206 VSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVL--PPLKGSTA-AVACGSL 262
Query: 488 HSVIL 492
HS+ L
Sbjct: 263 HSLAL 267
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 27/290 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G D GQLG + E V + VV + G HT+C+ E G V+++GCN
Sbjct: 56 GTVYTWGLNDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCN 115
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSF---RDSH 151
+G LG + P+ V K V ++AG HS+AL G VY+WG+ R H
Sbjct: 116 GKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGH 175
Query: 152 GSMG---LKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
GS L G I+ P + + + ++++G H +++ G+ G + QLG
Sbjct: 176 GSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGF 235
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
S G + L PLK +++ + G +LA+G N LG+
Sbjct: 236 -----GSDEDLAGPTVLP----PLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQ 286
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+ Q+ P + +S ++ +A+G HS A+ GK+Y +G
Sbjct: 287 GHEKQQQPKR-----PSKVPGVSAEQ---IAAGWKHSAAVTGSGKLYTWG 328
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 29/309 (9%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEV 74
P + V +++ TL C G V + G GQLGLG DV+ + LV+ L DN V
Sbjct: 87 PERVVALSAGYYHTL-CVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVA 145
Query: 75 VVGGM-HTVCLTEDGKVYTWGCNDEGALG------REAEGDS-EFIPQTVNLPK--KAVQ 124
V GM H++ LT G+VY+WG G LG R G S EF+P+ V + + Q
Sbjct: 146 VAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQ 205
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-IVKIASGADH 183
+SAG HS A+ G + WG + H +G + P L + G +A G+ H
Sbjct: 206 VSAGQMHSAAVSTAGDAFLWG-YGKFH-QLGFGSDEDLAGPTVLPPLKGSTAAVACGSLH 263
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
+ L G++L G + G LG+ ++ + + ++ KH V TG
Sbjct: 264 SLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVPGVSAEQIAAGWKHSAAV-TGSG 322
Query: 244 NTFI----SSKGSILAF--GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+ S+G+ L+F QLG + + +++PH + LS + ++A
Sbjct: 323 KLYTWGWGGSQGTALSFEGRTGTGGQLGHGN-------DFDYWSPHHVDWLSLTETDLVA 375
Query: 298 SGQHHSLAL 306
G +H+ A+
Sbjct: 376 CGMNHTAAI 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 43/219 (19%)
Query: 312 IYAFGRHDYGRLG--LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
+ FG D GRLG L+ SE + P + +L + ++ACG + A+D G +Y WG
Sbjct: 5 LATFGNGDCGRLGHSLEYASEEL--PRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWG 62
Query: 370 MGNGYQLGNGKEDD-------------------------ILNSEGKIYAFGRHDYGRLGL 404
+ + QLG+ ED + G +++FG + G+LGL
Sbjct: 63 LNDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGL 122
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
V EP + SLQD + ++A G S A+ + G +Y WG +LG+G
Sbjct: 123 GKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSAT--- 179
Query: 465 EPMKIEG----------KQLNNYTVLQVASGGQHSVILA 493
P ++ G + V QV++G HS ++
Sbjct: 180 -PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVS 217
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 195/441 (44%), Gaps = 61/441 (13%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE-GDSEFIPQTVNLPK---KAVQISA 127
++V G H ++E G+++TWG N G LG + G + P+ + + + +
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI-QKTPLKLESVSG--IVKIASGADHF 184
G HS+ + D VY+WG +D G +G + + Q P +E +SG I IA+G H
Sbjct: 1281 GGEHSICVDSDYVVYSWG--QDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHT 1338
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH----IDDVFT 240
++L G L + G +QGQLG + S S R ++ + + +H I +
Sbjct: 1339 IVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTI------VGIQHGGGKITQIAC 1392
Query: 241 GVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G ++ I S G + ++GL QLG + E P LI++L K T ++ G
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYE-------SIARPRLIEAL--KGVTKISCG 1443
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+++A +Y++G ++ +LG + T P + K ++ I CG + +
Sbjct: 1444 HFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEAT-PRVVDFFIQKNVSKIVCGLNHTITL 1502
Query: 360 DSEGVLYGWGMGNGYQLGN-----------------------GKEDDI-LNSEGK---IY 392
G L + N + + G+ + LN + IY
Sbjct: 1503 TYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIY 1562
Query: 393 AFGRHDYGRLGL-KNVSEPVTE---PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
A G ++G+LGL ++ P + PT I + + I+CG + I S G LY WG
Sbjct: 1563 ACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWG 1622
Query: 449 MGNGYQLGNGKEDDILEPMKI 469
GN Q+GNGK DD P++I
Sbjct: 1623 YGNFGQIGNGKTDDAWVPIRI 1643
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 167/375 (44%), Gaps = 48/375 (12%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C VV + GQ GQLG G + + ++ED+ + + G HT+ L + G+
Sbjct: 1287 CVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGE 1346
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK---------KAVQISAGDSHSVALLEDGT 140
+Y++G D+G LG S+ IP + L K QI+ G HSV ++G
Sbjct: 1347 LYSFGYGDQGQLGH-GSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGE 1405
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
VY+WG G G G G ++ P +E++ G+ KI+ G + + T N+ + G
Sbjct: 1406 VYSWGL-----GKQGQLGHGNYESIARPRLIEALKGVTKISCGHFYTMATTDLKNVYSWG 1460
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAF 256
E +LG + ++ + R + F +K++ + G+ +T ++ G
Sbjct: 1461 LGEHMKLGHGSDKNEA--TPRVVDFF-------IQKNVSKIVCGLNHTITLTYPGD---- 1507
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS-GQHHSLALNSEGK---I 312
LNN S + D + P S S T + G+ L LN + I
Sbjct: 1508 -LNNNSLSNDDDV-----NDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPI 1561
Query: 313 YAFGRHDYGRLGLK-NVSEPVTE---PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
YA G ++G+LGL ++ P + PT I + + I+CG + I S G LY W
Sbjct: 1562 YACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVW 1621
Query: 369 GMGNGYQLGNGKEDD 383
G GN Q+GNGK DD
Sbjct: 1622 GYGNFGQIGNGKTDD 1636
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 50/337 (14%)
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
PLK E + +K++ G DH +++ G L T G + GQLG + + + F
Sbjct: 1213 PLKNEKRA--IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFR 1270
Query: 225 PGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
G+ P+ I G ++ + S + ++G + + QLG V ++ P +
Sbjct: 1271 -GKSPI----IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQN------RPKI 1319
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-VSEPV---TEPTPIPS 340
I+ +S +K +A+G H++ L G++Y+FG D G+LG + VS+ + E I
Sbjct: 1320 IEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVG 1379
Query: 341 LQDK--TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHD 398
+Q IT IACG S G +Y WG+G QLG+G
Sbjct: 1380 IQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGN------------------ 1421
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
E + P I +L K +T I+CG+ + A +Y WG+G +LG+G
Sbjct: 1422 ---------YESIARPRLIEAL--KGVTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHG 1470
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+ + P ++ N V ++ G H++ L P
Sbjct: 1471 SDKNEATPRVVDFFIQKN--VSKIVCGLNHTITLTYP 1505
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---IVK 176
K+A+++S G H + E G ++ WG + GL IQ TP +LE G I+
Sbjct: 1218 KRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIM 1277
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
+ G +H + + S + + G + GQLG T +S S+N + + + + I
Sbjct: 1278 VECGGEHSICVDSDYVVYSWGQDKFGQLGHGT-KSVSQNRPKIIE-------DISGQKIQ 1329
Query: 237 DVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKS------GNTCFFTPHLIKSLS 289
+ G +T + K G + +FG + QLG S V KS NT H
Sbjct: 1330 AIAAGFAHTIVLKKSGELYSFGYGDQGQLGHG-SFVSKSIPTRIELNTIVGIQH-----G 1383
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K T +A G HS+ + G++Y++G G+LG N E + P I +L K +T I
Sbjct: 1384 GGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNY-ESIARPRLIEAL--KGVTKI 1440
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+CG+ + A +Y WG+G +LG+G + +
Sbjct: 1441 SCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKN 1474
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 166/398 (41%), Gaps = 70/398 (17%)
Query: 141 VYAWGSFRDSHGSMGLKG---EGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
++ WGS HG +GL G E I L + + I +IA G ++ V++T G + +
Sbjct: 28 MFCWGS--TIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSC 85
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG R+ + + PG L G Y+T I+ G + +
Sbjct: 86 GNNDYGQLGH-------EKGRKRLQLI-PG---LDAFVFKKAACGAYHTLAINEWGQLFS 134
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG +S +P ++K+L +A G H+ AL + G++Y++
Sbjct: 135 WGSNTEGQLGLNSKNFMES------SPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSW 188
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G + G+LGL ++ +P I + I IACG S AI G ++GWG Q
Sbjct: 189 GSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQ 248
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG D L +G ++ G YG+LG + S
Sbjct: 249 LGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSN 308
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L T+T I+CG + A + S G +Y WG+G QLGN + P
Sbjct: 309 EIL-PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQV 367
Query: 469 IEG--------------KQLNN----YTVLQVASGGQH 488
+ G KQ N+ Y V + +GG H
Sbjct: 368 VHGPWIAPNGSTIMDVNKQFNSRTIGYIVKHIFTGGDH 405
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 172/343 (50%), Gaps = 35/343 (10%)
Query: 48 GQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+LGLG +E + + +LD + ++ G +TV +T+ G++Y+ G ND G LG
Sbjct: 37 GELGLGG--IEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLG 94
Query: 103 REA-EGDSEFIP-QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG 160
E + IP + KKA + G H++A+ E G +++WGS ++ G +GL +
Sbjct: 95 HEKGRKRLQLIPGLDAFVFKKA---ACGAYHTLAINEWGQLFSWGS--NTEGQLGLNSKN 149
Query: 161 -IQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
++ +P ++++ S +V+IA G H LT+ G L + G +GQLG T +
Sbjct: 150 FMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPK 209
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+F+ +P I + G Y++ IS G++ +G N + QLG D++ +
Sbjct: 210 FISAFI---GIP-----IAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN--- 258
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P +++L + K A G+ S+ L +G ++ G YG+LG + S + P
Sbjct: 259 ----LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PR 313
Query: 337 PIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGN 378
+ L T+T I+CG + A + S G +Y WG+G QLGN
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGN 356
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 148/337 (43%), Gaps = 40/337 (11%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFALVEDL 68
P + F + + + C VV+T CG D GQLG RK L+ L
Sbjct: 52 PRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKG---RKRLQLIPGL 108
Query: 69 DNVV--EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
D V + G HT+ + E G++++WG N EG LG ++ E P+ V VQ
Sbjct: 109 DAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQ 168
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIAS 179
I+ G H+ AL +G +Y+WGS +S G +GL + K +K + +S I IA
Sbjct: 169 IACGMKHAFALTNNGELYSWGS--NSEGQLGLGTD--TKYEIKPKFISAFIGIPIAFIAC 224
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + ++ G + G GQLG + RN + L+ ++ +
Sbjct: 225 GGYHSIAISKSGAVFGWGKNTFGQLG--LNDTQDRNLPCQLQTLQNAKICYAACGEE--- 279
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
++ F++ G + G Y QLG N+ P + L T ++ G
Sbjct: 280 ---FSVFLTVDGGVFTCGAGMYGQLGHG-------SNSNEILPRQVMELMGSTVTQISCG 329
Query: 300 QHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
+ H+LAL S G++YA+G G+LG + + VT P
Sbjct: 330 KRHTLALVPSRGRVYAWGLGGAGQLG-NHSTRSVTTP 365
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP---DVMERKTFALVEDLDNVVEVVVGGMHTVCLT-EDGK 89
T G V TCG G GQLG G +++ R+ L+ V ++ G HT+ L G+
Sbjct: 285 TVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMG--STVTQISCGKRHTLALVPSRGR 342
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLP 119
VY WG G LG + S PQ V+ P
Sbjct: 343 VYAWGLGGAGQLGNHST-RSVTTPQVVHGP 371
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 176/408 (43%), Gaps = 54/408 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY WG ND+ LG + + L K K V I+ G + ++G +YA G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2995
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIA--SGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ +G + P+ S I K++ SG H + LT G + + G E G+LG
Sbjct: 2996 NGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGH 3055
Query: 207 ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQL 264
+S +P + LK K I D+ G ++ I+S G + +GL Y +L
Sbjct: 3056 ----------GNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3105
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGR 322
G D+ Q P L++SL ++ +A G ++AL ++G +Y++G D+G+
Sbjct: 3106 GHGDTATQSK-------PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGK 3158
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + S+ P I L + I CG S A+ G ++ WG G+ ++LG+G +
Sbjct: 3159 LG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3217
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
V +PT + L+ K + +A G A+ G
Sbjct: 3218 H---------------------------VRKPTLVEGLRGKKVIHVAVGALHCLAVTDIG 3250
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+Y WG + Q GNG +P + +L++ V +V+ G HS+
Sbjct: 3251 QVYAWGDNDHGQQGNGTTIVNKKPSLVH--ELDDARVNRVSCGSSHSI 3296
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 169/391 (43%), Gaps = 67/391 (17%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P+ ES+S + V++ G +T+ G +
Sbjct: 3953 GAIYGWG--HNHRGQLGGLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 4009
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G +GR+ G+ + VP + I VF G + +
Sbjct: 4010 TG---YGAVGRL-----------GIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL 4055
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P LI+ L + +A G HHS A+
Sbjct: 4056 SSEGHVYSWGEGDDGKLGHGN-------RLSYDRPKLIEELLGTEIVDIACGGHHSAAIT 4108
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + + +T P I +LQD + +ACG + + + + +
Sbjct: 4109 SAGWLYTWGKGRYGRLGHGDSEDQLT-PKLIEALQDYKVIDVACGSGDAQTLCVTDDDNV 4167
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G IY +G+ DY
Sbjct: 4168 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDY 4227
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4228 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGT 4286
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ P + L + +VA G H++
Sbjct: 4287 TSALQRPRLVHA--LQGKKITRVACGSAHTL 4315
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 180/417 (43%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K L E L + V + GG T+ +T DGKVY
Sbjct: 3951 GSGAIYGWGHNHRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 4009
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GA+GR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 4010 TG---YGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4066
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G P +E + G IV IA G H +TS G L T G +G+
Sbjct: 4067 GDD--GKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG---KGRY 4121
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + L P + L+ + DV G ++ ++ ++G +
Sbjct: 4122 GRLGHGDSEDQ-------LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4174
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I+SL+ + G S+AL G IY +G+ DY
Sbjct: 4175 YGKLGRGGSDGCK-------IPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDY 4227
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4228 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG- 4285
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K IT +ACG+ + A
Sbjct: 4286 --------------------------TTSALQRPRLVHALQGKKITRVACGSAHTLA 4316
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 34/243 (13%)
Query: 282 PHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P + S+K M+AS H LAL + +Y++G D GRLG + + EP I
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAW-YDEPKLIE 552
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-------------- 385
+L +K IT IACG+ S A+ S G LY WG GN +LG+G D+++
Sbjct: 553 ALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVV 612
Query: 386 --------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ G ++++G +YG+LG T P + L D + + CG
Sbjct: 613 YVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT-PKIVDKLLDINVAKVYCG 671
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S A+ + G +Y WG G Y+LG+G ED + P I+ L V ++ G H +
Sbjct: 672 GQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIID--ILKTKKVKELCVGNLHVLA 729
Query: 492 LAK 494
L +
Sbjct: 730 LTE 732
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 48/349 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D V E K L + + V V GG H + LT
Sbjct: 2978 TLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALT 3037
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFI--PQTV-NLPKKAVQ-ISAGDSHSVALLEDGTV 141
+DGKV++WG ++G LG G+S + P+ + +L K ++ I+ G HS A+ G +
Sbjct: 3038 QDGKVFSWGEGEDGKLG---HGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAG 197
Y WG +G +G Q P ++S+ G I++IA G+ + LT+ G + + G
Sbjct: 3095 YTWG--LGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWG 3152
Query: 198 CPEQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
+ G+LGR T R G+ +E G ++ ++ G
Sbjct: 3153 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECG--------------AQFSLALTKYG 3198
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ +G +Y +LG D V+K P L++ L KK +A G H LA+ G
Sbjct: 3199 EVWTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKVIHVAVGALHCLAVTDIG 3250
Query: 311 KIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
++YA+G +D+G+ G N + V +P+ + L D + ++CG+ S A
Sbjct: 3251 QVYAWGDNDHGQQG--NGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3297
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 39/251 (15%)
Query: 247 ISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+S +G + A G +LG D S V + F + ++IK +S + SG H+LA
Sbjct: 2982 VSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVS------VHSGGKHALA 3035
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L +GK++++G + G+LG N S + +P I SL+ K I IACG+ S AI S G L
Sbjct: 3036 LTQDGKVFSWGEGEDGKLGHGN-SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094
Query: 366 YGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
Y WG+G +YGRLG + + ++P + SL + I
Sbjct: 3095 YTWGLG--------------------------EYGRLGHGDTATQ-SKPKLVQSLVGQRI 3127
Query: 426 TSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
IACG + + A+ ++G++Y WG G+ +LG G D P+ I+ +LN V+Q+
Sbjct: 3128 IQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLID--RLNGLGVVQIE 3185
Query: 484 SGGQHSVILAK 494
G Q S+ L K
Sbjct: 3186 CGAQFSLALTK 3196
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 164/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V G G G+LG+G P ++E V+ V V GG H
Sbjct: 3997 TLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKK----VAVNSGGKHC 4052
Query: 82 VCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ L+ +G VY+WG D+G LG R + + I + L + V I+ G HS A+
Sbjct: 4053 LALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACGGHHSAAITSA 4110
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLL 194
G +Y WG R +G +G Q TP +E++ ++ +A SG + +T N+
Sbjct: 4111 GWLYTWGKGR--YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4168
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTF 246
+ G + G+LG RG S + ++P+K + + + GV ++
Sbjct: 4169 SWGDGDYGKLG------------RGGS--DGCKIPMKIESLAGL--GVVKVECGSQFSVA 4212
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G+I +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4213 LTRSGAIYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4264
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4265 CTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4316
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 55/310 (17%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
I+ IAS +D H++ LT ++ + G + G+LG + R + EP + L
Sbjct: 505 IIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLG---------HGDRAW-YDEPKLIEAL 554
Query: 231 KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G Y+ +SS G + +G NY +LG +S+ P L+ +L+
Sbjct: 555 VEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSD-------NVMIPTLVTALN 607
Query: 290 DKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+A SG +L + + G ++++G +YG+LG T P + L D +
Sbjct: 608 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT-PKIVDKLLDINVA 666
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------- 384
+ CG S A+ + G +Y WG G Y+LG+G ED +
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLH 726
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
L + IY +GR+DYG++ + V EPT P+L K + +ACG SFA +
Sbjct: 727 VLALTEDQLIYGWGRNDYGQID-PALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTS 785
Query: 442 GVLYGWGMGN 451
W + N
Sbjct: 786 ----AWSVAN 791
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 137/303 (45%), Gaps = 33/303 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVA 134
G H + LT+D VY+WG D G LG R + + I V K I+ G ++S A
Sbjct: 514 GTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVE--KNITFIACGSTYSAA 571
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSR 190
L +G +Y WG R ++G +G P + +++G +V +A SG + +T+
Sbjct: 572 LSSNGELYTWG--RGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTAS 629
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISS 249
G + + G G+LGR S+ + L+ ++ V+ G ++ +++
Sbjct: 630 GIVFSWGDGNYGKLGR-GGCDGSKTPKIVDKLLD--------INVAKVYCGGQFSAALTA 680
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + +G +LG + + + P +I L KK L G H LAL +
Sbjct: 681 YGEVYTWGKGEAYRLGHGNEDHVR-------YPKIIDILKTKKVKELCVGNLHVLALTED 733
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
IY +GR+DYG++ + V EPT P+L K + +ACG SFA + W
Sbjct: 734 QLIYGWGRNDYGQID-PALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTS----AWS 788
Query: 370 MGN 372
+ N
Sbjct: 789 VAN 791
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 109/262 (41%), Gaps = 39/262 (14%)
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPH-LIKSLSDKKFTMLASGQHHS--LALNSEGKI 312
F L Q+ E ++ K GNT H L K D++ + + L+ + G I
Sbjct: 3898 FCLEVTKQINEMITD--KEGNTKDHENHELFKQEHDEQLLQWLNRRPEDWMLSWDGSGAI 3955
Query: 313 YAFGRHDYGRL-GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
Y +G + G+L GL+ V P SL + G FA+ ++G +Y G G
Sbjct: 3956 YGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYG 4013
Query: 372 NGYQLGNGKEDDI----------------------------LNSEGKIYAFGRHDYGRLG 403
+LG G D + L+SEG +Y++G D G+LG
Sbjct: 4014 AVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLG 4073
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
N P I L I IACG S AI S G LY WG G +LG+G +D
Sbjct: 4074 HGN-RLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4132
Query: 464 LEPMKIEGKQLNNYTVLQVASG 485
L P IE L +Y V+ VA G
Sbjct: 4133 LTPKLIEA--LQDYKVIDVACG 4152
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G G+ G+LG G KT +V+ L NV +V GG + LT G+
Sbjct: 625 CVTASGIVFSWGDGNYGKLGRG-GCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGE 683
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSF 147
VYTWG + LG E + P+ +++ KK ++ G+ H +AL ED +Y WG
Sbjct: 684 VYTWGKGEAYRLGHGNEDHVRY-PKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWG-- 740
Query: 148 RDSHGSM 154
R+ +G +
Sbjct: 741 RNDYGQI 747
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T V + G GD G+LG G P ++E ALVE N+ + G ++ L+
Sbjct: 521 TQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIE----ALVEK--NITFIACGSTYSAALSS 574
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVY 142
+G++YTWG + G LG D+ IP V V +GDS ++ + G V+
Sbjct: 575 NGELYTWGRGNYGRLG-HGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPE 200
+WG ++G +G G KTP ++ + I K+ G LT+ G + T G E
Sbjct: 634 SWGD--GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGE 691
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+LG + + R ++ LK K + ++ G + ++ I +G N
Sbjct: 692 AYRLGH-----GNEDHVRYPKIID----ILKTKKVKELCVGNLHVLALTEDQLIYGWGRN 742
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+Y Q+ A T P L +LS K LA G S A
Sbjct: 743 DYGQIDPA-------LGTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 357 FAIDSEGVLYGWGMGNGYQLG------------------------NGKEDDI--LNSEGK 390
+ D G +YGWG + QLG G E + + ++GK
Sbjct: 3947 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGK 4006
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGWG 448
+YA G GRLG+ ++ V PT + S+Q + +A G A+ SEG +Y WG
Sbjct: 4007 VYATGYGAVGRLGIGG-TDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4065
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G+ +LG+G P IE +L ++ +A GG HS +
Sbjct: 4066 EGDDGKLGHGNRLSYDRPKLIE--ELLGTEIVDIACGGHHSAAI 4107
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 376 LGNGKEDDILNSEGK--IYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQDKTITSIACGN 432
L ED +L+ +G IY +G + G+LG L+ V P SL + G
Sbjct: 3938 LNRRPEDWMLSWDGSGAIYGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGE 3995
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
FA+ ++G +Y G G +LG G D ++ P +E Q + V SGG+H + L
Sbjct: 3996 QTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL 4055
Query: 493 A 493
+
Sbjct: 4056 S 4056
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 178/409 (43%), Gaps = 56/409 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY WG ND+ LG + + L K K + I+ G + ++G +YA G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG--E 3313
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
++G +GL + P + +S V + SG H + LT G + + G E G+L
Sbjct: 3314 GTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKL 3373
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
G S S + R + LK K I D+ G ++ I+S G + +GL Y +
Sbjct: 3374 GH--GNSVSLDKPRLIE-------SLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3424
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYG 321
LG D+ Q P L++SL ++ +A G ++AL ++G +Y++G D+G
Sbjct: 3425 LGHGDTATQ-------MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFG 3477
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+LG + S+ P I L + I CG S A+ G ++ WG G+ ++LG+G +
Sbjct: 3478 KLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3536
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
V +PT + L+ K + +A G A+
Sbjct: 3537 HH---------------------------VRKPTLVEGLRGKKVVHVAVGALHCLAVTDT 3569
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P + +L++ V +V+ G HS+
Sbjct: 3570 GQVYAWGDNDHGQQGNGSTIVNKKPSLVH--ELDDARVNRVSCGSSHSI 3616
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 172/398 (43%), Gaps = 69/398 (17%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P+ ES+S + V++ G + +T+ G +
Sbjct: 4259 GAIYGWG--HNHRGQLGGLEGAKV-KLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4315
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G GR+ G+ + VP + I VF G + +
Sbjct: 4316 TG---YGAAGRL-----------GIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL 4361
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLAL 306
SS+G + ++G + +LG GN + P LI+ L + +A G HHS A+
Sbjct: 4362 SSEGHVYSWGEGDDGKLGH--------GNRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4413
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGV 364
S G +Y +G+ YGRLG + + +T P + +LQD + +ACG + + + +
Sbjct: 4414 TSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDYKVIDVACGSGDAQTLCVTDDDN 4472
Query: 365 LYGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHD 398
++ WG G+ +LG G D L G IY +G+ D
Sbjct: 4473 VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGD 4532
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
Y RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4533 YHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4591
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + L + +VA G H++ + K
Sbjct: 4592 TTSALQRPRLVHA--LQGKKITRVACGSAHTLAWSTMK 4627
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 180/417 (43%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K L E L + V + GG T+ +T DGKVY
Sbjct: 4257 GSGAIYGWGHNHRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4315
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GA GR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 4316 TG---YGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4372
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G + P +E + G IV IA G H +TS G L T G +G+
Sbjct: 4373 GDD--GKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG---KGRY 4427
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + L P V L+ + DV G ++ ++ ++G +
Sbjct: 4428 GRLGHGDSEDQ-------LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4480
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I+SL+ + G S+AL G IY +G+ DY
Sbjct: 4481 YGKLGRGGSDGCK-------IPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4533
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4534 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG- 4591
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K IT +ACG+ + A
Sbjct: 4592 --------------------------TTSALQRPRLVHALQGKKITRVACGSAHTLA 4622
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 40/239 (16%)
Query: 282 PHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P + S+K TM+AS H LAL + +Y++G D GRLG + EP +
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW-YDEPKLVE 544
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-------------- 385
+L DK IT IACG+ S + S G LY WG GN +LG+G D++L
Sbjct: 545 ALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVV 604
Query: 386 --------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ G ++++G +YG+LG T P + L D + + CG
Sbjct: 605 YVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT-PKIVDKLLDINVAKVYCG 663
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKED--------DILEPMKIEGKQLNNYTVLQV 482
S A+ + G +Y WG G GY+LG+G E+ ++L+P K++ + N+ VL +
Sbjct: 664 GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLAL 722
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 48/349 (13%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D V E K L + + V V GG H + LT
Sbjct: 3298 TLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALT 3357
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFI--PQTV-NLPKKAVQ-ISAGDSHSVALLEDGTV 141
+DGK+++WG ++G LG G+S + P+ + +L K ++ I+ G HS A+ G +
Sbjct: 3358 QDGKIFSWGEGEDGKLG---HGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3414
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAG 197
Y WG +G +G Q P ++S+ G ++++A G+ + LT+ G++ + G
Sbjct: 3415 YTWG--LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3472
Query: 198 CPEQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG 251
+ G+LGR T R G+ +E G ++ ++ G
Sbjct: 3473 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECG--------------AQFSLALTKYG 3518
Query: 252 SILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+ +G +Y +LG D V+K P L++ L KK +A G H LA+ G
Sbjct: 3519 EVWTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKVVHVAVGALHCLAVTDTG 3570
Query: 311 KIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
++YA+G +D+G+ G N S V +P+ + L D + ++CG+ S A
Sbjct: 3571 QVYAWGDNDHGQQG--NGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3617
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 41/252 (16%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSL 304
+S +G + A G +LG D N C P LI LS +A SG H+L
Sbjct: 3302 VSQEGKLYACGEGTNGRLGLGDD-----SNVC--EPKLIPFLSQYMIKKVAVHSGGKHAL 3354
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 364
AL +GKI+++G + G+LG N S + +P I SL+ K I IACG+ S AI S G
Sbjct: 3355 ALTQDGKIFSWGEGEDGKLGHGN-SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGE 3413
Query: 365 LYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
LY WG+G +YGRLG + + + +P + SL +
Sbjct: 3414 LYTWGLG--------------------------EYGRLGHGDTATQM-KPKLVQSLVGQR 3446
Query: 425 ITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
+ +ACG + + A+ ++G +Y WG G+ +LG G D P+ I+ +LN V+Q+
Sbjct: 3447 VIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLID--RLNGLGVVQI 3504
Query: 483 ASGGQHSVILAK 494
G Q S+ L K
Sbjct: 3505 ECGAQFSLALTK 3516
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 163/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V G G G+LG+G P ++E V+ V V GG H
Sbjct: 4303 TLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKK----VAVNSGGKHC 4358
Query: 82 VCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ L+ +G VY+WG D+G LG R + I + L + V I+ G HS A+
Sbjct: 4359 LALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACGGHHSAAITSA 4416
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLL 194
G +Y WG R +G +G Q TP +E++ ++ +A SG + +T N+
Sbjct: 4417 GWLYTWGKGR--YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4474
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTF 246
+ G + G+LG RG S + ++P+K + + + GV ++
Sbjct: 4475 SWGDGDYGKLG------------RGGS--DGCKIPMKIESLAGL--GVIKVECGSQFSVA 4518
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G+I +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4519 LTRSGAIYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4570
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4571 CTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4622
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 55/310 (17%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
+ IAS +D H++ LT ++ + G + G+LG + + + EP V L
Sbjct: 497 VTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDR----------VWYDEPKLVEAL 546
Query: 231 KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G Y+ +SS G + +G NY +LG +S+ P L+ +L+
Sbjct: 547 VDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSD-------NVLIPTLVTALN 599
Query: 290 DKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+A SG +L + + G ++++G +YG+LG T P + L D +
Sbjct: 600 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT-PKIVDKLLDINVA 658
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------- 384
+ CG S A+ + G +Y WG G GY+LG+G E+ I
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH 718
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
L + +Y +GR+DYG++ + V EPT P+L K I +ACG SFA +
Sbjct: 719 VLALTEDQLVYGWGRNDYGQID-PALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS 777
Query: 442 GVLYGWGMGN 451
W + N
Sbjct: 778 ----AWSVAN 783
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++ S+ ++G + +LG D + P L+++L DK T +A G
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGD-------RVWYDEPKLVEALVDKNITFIACGS 558
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 358
+S L+S G++Y +GR +YGRLG N S+ V PT + +L + +ACG + +
Sbjct: 559 TYSAVLSSNGELYTWGRGNYGRLGHGN-SDNVLIPTLVTALNGHMVVYVACGSGDSQTLC 617
Query: 359 IDSEGVLYGWGMGNGYQLGNGKED------------DI--------------LNSEGKIY 392
+ + G+++ WG GN +LG G D DI L + G++Y
Sbjct: 618 VTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVY 677
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+G+ + RLG N E + P I L+ K + + GN A+ + ++YGWG +
Sbjct: 678 TWGKGEGYRLGHGN-EEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDY 736
Query: 453 YQLGNGKEDDILEP 466
Q+ + EP
Sbjct: 737 GQIDPALGTIVPEP 750
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSV 133
G H + LT+D VY+WG D G LG GD + P+ V + K I+ G ++S
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLG---HGDRVWYDEPKLVEALVDKNITFIACGSTYSA 562
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTS 189
L +G +Y WG R ++G +G P + +++G +V +A SG + +T+
Sbjct: 563 VLSSNGELYTWG--RGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTA 620
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFIS 248
G + + G G+LGR S+ + L+ ++ V+ G ++ ++
Sbjct: 621 SGIVFSWGDGNYGKLGR-GGCDGSKTPKIVDKLLD--------INVAKVYCGGQFSAALT 671
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G + +G +LG + E + P +I+ L KK L G H LAL
Sbjct: 672 AYGEVYTWGKGEGYRLGHGNEEHIR-------YPKVIEVLKPKKVKELCVGNFHVLALTE 724
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+ +Y +GR+DYG++ + V EPT P+L K I +ACG SFA + W
Sbjct: 725 DQLVYGWGRNDYGQID-PALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS----AW 779
Query: 369 GMGN 372
+ N
Sbjct: 780 SVAN 783
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 303 SLALNSEGKIYAFGRHDYGRL-GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+L+ + G IY +G + G+L GL+ V P SL + G A+ +
Sbjct: 4252 TLSWDGSGAIYGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGEQTLLAVTA 4309
Query: 362 EGVLYGWGMGNGYQLGNGKEDDI----------------------------LNSEGKIYA 393
+G +Y G G +LG G D + L+SEG +Y+
Sbjct: 4310 DGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4369
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G D G+LG N P I L I IACG S AI S G LY WG G
Sbjct: 4370 WGEGDDGKLGHGN-RLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4428
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+LG+G +D L P +E L +Y V+ VA G
Sbjct: 4429 RLGHGDSEDQLTPKLVEA--LQDYKVIDVACG 4458
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G G+ G+LG G KT +V+ L NV +V GG + LT G+
Sbjct: 617 CVTASGIVFSWGDGNYGKLGRG-GCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGE 675
Query: 90 VYTWGCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
VYTWG +G R G+ E I P+ + + PKK ++ G+ H +AL ED VY WG
Sbjct: 676 VYTWG---KGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWG 732
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG-ADHFVMLTS 189
R+ +G + I P ++SG I+ +A G F TS
Sbjct: 733 --RNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS 777
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L + +Y++G D GRLG + EP + +L DK IT IACG+ S + S G L
Sbjct: 512 LTQDSSVYSWGNGDGGRLGHGDRVW-YDEPKLVEALVDKNITFIACGSTYSAVLSSNGEL 570
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
Y WG GN +LG+G D++L P + LN + V+ VA G S L
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTA--LNGHMVVYVACGSGDSQTL 616
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 29/276 (10%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G V + LVE L N+ + G ++ L+ +G++YTWG
Sbjct: 518 VYSWGNGDGGRLGHGDRVWYDEP-KLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRG 576
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ G LG D+ IP V V +GDS ++ + G V++WG ++G
Sbjct: 577 NYGRLG-HGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGD--GNYG 633
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G G KTP ++ + I K+ G LT+ G + T G E +LG +
Sbjct: 634 KLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEE 693
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
+ + + EV LK K + ++ G ++ ++ + +G N+Y Q+ A
Sbjct: 694 H--------IRYPKVIEV-LKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA-- 742
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
T P L +LS K LA G S A
Sbjct: 743 -----LGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLG------------------------NGKEDDIL--NSEG 389
+ + D G +YGWG + QLG G E +L ++G
Sbjct: 4252 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4311
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 447
K+YA G GRLG+ ++ V PT + S+Q + +A G A+ SEG +Y W
Sbjct: 4312 KVYATGYGAAGRLGIGG-TDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSW 4370
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G G+ +LG+G P IE +L ++ +A GG HS +
Sbjct: 4371 GEGDDGKLGHGNRLMYDRPKLIE--ELLGTEIVDIACGGHHSAAI 4413
>gi|444911273|ref|ZP_21231448.1| hypothetical protein D187_02792 [Cystobacter fuscus DSM 2262]
gi|444718031|gb|ELW58847.1| hypothetical protein D187_02792 [Cystobacter fuscus DSM 2262]
Length = 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 64/372 (17%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLE 137
H+ L DG+++TWG ND G LGR G++ P + +P A + AG S ++ LLE
Sbjct: 132 HSAAL-RDGQLFTWGGNDAGQLGRPDAGNT---PHPLPVPGLAPVRAVVAGPSSTLVLLE 187
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
+G +AWG+ G + + E TP ++ES +V +A GA H ++L + G +L G
Sbjct: 188 EGGAWAWGTL--PRGLVPARKE--PSTPTRVESPGPVVDVALGASHALLLLADGTVLAVG 243
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSI 253
+GQL G+ P E P + + D+ ++ + G++
Sbjct: 244 SNTKGQL--------------GLGSTAPVEAPTRVPGLSDIVRVAVGTAHSVALRRDGTV 289
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPH--LIKSLSDKKFTMLASGQHHSLALNSEGK 311
+G N QLG + + TPH ++ + +A+G+ H LAL ++G+
Sbjct: 290 FTWGDNGDGQLGNGELDA---------TPHPEPLEVAHLGQVVDIATGRGHVLALGADGR 340
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
+ A+G G+LG + P+ L +++ N V FA+ + G L+ WG
Sbjct: 341 VRAWGLGMSGQLGHGKSGMLGSRAQPVDVLDVTDAVAVSALNNVGFALSASGTLWAWGQN 400
Query: 372 NGYQLGNGKEDD------------------------ILNSEGKIYAFGRHDYGRLGLKNV 407
+ QLG+G + +G A+G + G+LG
Sbjct: 401 SNAQLGDGSLAERPRPIQVQGLGPVRAVAAGSLHTLACTRDGDCLAWGANHDGQLGASTP 460
Query: 408 SE-PVTEPTPIP 418
SE PTP+P
Sbjct: 461 SEGSPRSPTPLP 472
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 149/345 (43%), Gaps = 31/345 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + T G D GQLG PD V L V VV G T+ L E+G + WG
Sbjct: 139 GQLFTWGGNDAGQLGR-PDAGNTPHPLPVPGLAPVRAVVAGPSSTLVLLEEGGAWAWGTL 197
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G + E + P V P V ++ G SH++ LL DGTV A GS ++ G +GL
Sbjct: 198 PRGLVPARKEPST---PTRVESPGPVVDVALGASHALLLLADGTVLAVGS--NTKGQLGL 252
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P ++ +S IV++A G H V L G + T G GQLG
Sbjct: 253 GSTAPVEAPTRVPGLSDIVRVAVGTAHSVALRRDGTVFTWGDNGDGQLG----------- 301
Query: 217 RRGMSFLEPGEVPLKRKHID---DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
G P PL+ H+ D+ TG + + + G + A+GL QLG S +
Sbjct: 302 -NGELDATPHPEPLEVAHLGQVVDIATGRGHVLALGADGRVRAWGLGMSGQLGHGKSGML 360
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
S + L +++ + AL++ G ++A+G++ +LG +++E
Sbjct: 361 GS------RAQPVDVLDVTDAVAVSALNNVGFALSASGTLWAWGQNSNAQLGDGSLAE-- 412
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
P PI + ++A G+ + A +G WG + QLG
Sbjct: 413 -RPRPIQVQGLGPVRAVAAGSLHTLACTRDGDCLAWGANHDGQLG 456
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 128/295 (43%), Gaps = 28/295 (9%)
Query: 51 GLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE 110
GL P E T VE VV+V +G H + L DG V G N +G LG + E
Sbjct: 200 GLVPARKEPSTPTRVESPGPVVDVALGASHALLLLADGTVLAVGSNTKGQLGLGSTAPVE 259
Query: 111 FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES 170
P V V+++ G +HSVAL DGTV+ WG D G PL++
Sbjct: 260 -APTRVPGLSDIVRVAVGTAHSVALRRDGTVFTWGDNGDGQLGNGELDATPHPEPLEVAH 318
Query: 171 VSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM--SFLEPGEV 228
+ +V IA+G H + L + G + G GQLG + + GM S +P +V
Sbjct: 319 LGQVVDIATGRGHVLALGADGRVRAWGLGMSGQLG---------HGKSGMLGSRAQPVDV 369
Query: 229 PLKRKHIDDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
D V N +S+ G++ A+G N+ +QLG+ + P I
Sbjct: 370 ---LDVTDAVAVSALNNVGFALSASGTLWAWGQNSNAQLGD---------GSLAERPRPI 417
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE-PVTEPTPIP 339
+ +A+G H+LA +G A+G + G+LG SE PTP+P
Sbjct: 418 QVQGLGPVRAVAAGSLHTLACTRDGDCLAWGANHDGQLGASTPSEGSPRSPTPLP 472
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 153/375 (40%), Gaps = 55/375 (14%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
+ ++AG SHS AL DG ++ WG + G +G G PL + ++ + + +
Sbjct: 121 RWGTSLAAGLSHSAAL-RDGQLFTWGG--NDAGQLGRPDAGNTPHPLPVPGLAPVRAVVA 177
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G ++L G G +G + A + PG V +D
Sbjct: 178 GPSSTLVLLEEGGAWAWGTLPRGLV------PARKEPSTPTRVESPGPV------VDVAL 225
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+ + + G++LA G N QLG + ++ P + LSD +A G
Sbjct: 226 GASHALLLLADGTVLAVGSNTKGQLGLGSTAPVEA-------PTRVPGLSD--IVRVAVG 276
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HS+AL +G ++ +G + G+LG + + P P+ + IA G A+
Sbjct: 277 TAHSVALRRDGTVFTWGDNGDGQLGNGEL-DATPHPEPLEVAHLGQVVDIATGRGHVLAL 335
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
++G + WG+G QLG+GK G LG + P+
Sbjct: 336 GADGRVRAWGLGMSGQLGHGKS------------------GMLG--------SRAQPVDV 369
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
L +++ N V FA+ + G L+ WG + QLG+G + P++++G V
Sbjct: 370 LDVTDAVAVSALNNVGFALSASGTLWAWGQNSNAQLGDGSLAERPRPIQVQGLG----PV 425
Query: 480 LQVASGGQHSVILAK 494
VA+G H++ +
Sbjct: 426 RAVAAGSLHTLACTR 440
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTV--CLTEDGKVYTWG 94
G V G G +GQLG G M V+ LD V V ++ V L+ G ++ WG
Sbjct: 339 GRVRAWGLGMSGQLGHGKSGMLGSRAQPVDVLDVTDAVAVSALNNVGFALSASGTLWAWG 398
Query: 95 CNDEGALGREAEGDSEFIPQTVNL----PKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
N LG +G P+ + + P +AV +AG H++A DG AWG+ D
Sbjct: 399 QNSNAQLG---DGSLAERPRPIQVQGLGPVRAV--AAGSLHTLACTRDGDCLAWGANHDG 453
Query: 151 HGSMGLKGEGIQKTPLKLESV 171
EG ++P L V
Sbjct: 454 QLGASTPSEGSPRSPTPLPVV 474
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 158/358 (44%), Gaps = 33/358 (9%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKTF 62
K AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 11 KFAENIPSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTC 70
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG--ALGREAEGDSEFIPQTVNLPK 120
+ V G HT+ TE GKVY G N+EG LG E +S + +
Sbjct: 71 VKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQR 130
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
K Q+SAG + S AL EDG ++ WG +S G +GLK P ++ I I+ G
Sbjct: 131 KIKQLSAGSNTSAALTEDGELFMWGD--NSEGQIGLKNITNVCVPQQVTVGKPISWISCG 188
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H +T+ G L T G PE G+LG Q + P VP + + V
Sbjct: 189 YYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRM--------PQSVPGIPEKVVQVAC 240
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLAS 298
G +T + ++ ++ FGL + QLG G F T P +I+ + D K + +
Sbjct: 241 GGGHTVVLTEKAVYTFGLGQFGQLG--------LGTFLFETPVPKVIEHIKDLKISSIFC 292
Query: 299 GQHHSLALNSEGKIYAFGRHDYGR--LGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
G++H+ + G +Y FG +G+ LGL+N + T PT + + +ACG C
Sbjct: 293 GENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFT-PTLCSNFLRFIVQLVACGGC 349
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 164/376 (43%), Gaps = 51/376 (13%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIAS-GAD 182
+S GD H+ + + +Y +GS ++ G +GL + P ++++ VK A+ G +
Sbjct: 30 LSCGDEHTAIVTGNNKLYMFGS--NNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRN 87
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H ++ T G + +G +GQLG + RN+ +SF ++ I + G
Sbjct: 88 HTLVSTEGGKVYASGGNNEGQLG--LGDTDERNSFHLISFF------TSQRKIKQLSAGS 139
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ ++ G + +G N+ Q+G ++ N C P + K + ++ G +
Sbjct: 140 NTSAALTEDGELFMWGDNSEGQIG-----LKNITNVC--VPQQV--TVGKPISWISCGYY 190
Query: 302 HSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HS + +EG++Y FG + G+LGL K + P +P + +K + +ACG + +
Sbjct: 191 HSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEK-VVQVACGGGHTVVL- 248
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
+E +Y FG +G+LGL P I +
Sbjct: 249 --------------------------TEKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHI 282
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+D I+SI CG + I G++Y +G G +LG G E+ + + V
Sbjct: 283 KDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQ 342
Query: 481 QVASGGQHSVILAKPK 496
VA GG H+++ A P+
Sbjct: 343 LVACGGCHTLVFATPR 358
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 130/288 (45%), Gaps = 41/288 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN---VVEVVVGGMHTVCLTEDGKV 90
T GG V G + GQLGLG D ER +F L+ + + ++ G + LTEDG++
Sbjct: 93 TEGGKVYASGGNNEGQLGLG-DTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGEL 151
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
+ WG N EG +G + + +PQ V + K IS G HS + +G +Y +G
Sbjct: 152 FMWGDNSEGQIGLKNITNV-CVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFG--EPE 208
Query: 151 HGSMGLKGEGI--QKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
G +GL + + + P +SV GI V++A G H V+LT + + T G + GQL
Sbjct: 209 SGKLGLPKQLLVNHRMP---QSVPGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQL 264
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-----VFTGVYNT-FISSKGSILAFGL 258
G T FL VP +HI D +F G +T I+ G + FG
Sbjct: 265 GLGT-------------FLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGD 311
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ +LG + T FTP L + ++A G H+L
Sbjct: 312 GRHGKLG-----LGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVF 354
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 58/366 (15%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVA 134
G HT +T + K+Y +G N+ G LG ++ P V P+K + G +H++
Sbjct: 33 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVN-KPTCVKALKPEKVKFAACGRNHTLV 91
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL----ESVSGIVKIASGADHFVMLTSR 190
E G VYA G ++ G +GL G+ ++ L S I ++++G++ LT
Sbjct: 92 STEGGKVYASGG--NNEGQLGL-GDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTED 148
Query: 191 GNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FI 247
G L G +GQ+G IT + G K I + G Y++ F+
Sbjct: 149 GELFMWGDNSEGQIGLKNITNVCVPQQVTVG-------------KPISWISCGYYHSAFV 195
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+++G + FG +LG + K P + + +K +A G H++ L
Sbjct: 196 TTEGELYTFGEPESGKLG-----LPKQLLVNHRMPQSVPGIPEK-VVQVACGGGHTVVL- 248
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+E +Y FG +G+LGL P I ++D I+SI CG + I G++Y
Sbjct: 249 TEKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYT 308
Query: 368 WGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS 427
+G G +LG LGL+N + T PT + +
Sbjct: 309 FGDGRHGKLG------------------------LGLENFTNQFT-PTLCSNFLRFIVQL 343
Query: 428 IACGNC 433
+ACG C
Sbjct: 344 VACGGC 349
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
L+ G H+ + K+Y FG +++G+LGL + S V +PT + +L+ + + ACG
Sbjct: 29 FLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKST-VNKPTCVKALKPEKVKFAACGRN 87
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------ILNS 387
+ G +Y G N QLG G D+ L
Sbjct: 88 HTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTE 147
Query: 388 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 447
+G+++ +G + G++GLKN++ P K I+ I+CG S + +EG LY +
Sbjct: 148 DGELFMWGDNSEGQIGLKNITNVC---VPQQVTVGKPISWISCGYYHSAFVTTEGELYTF 204
Query: 448 GMGNGYQLGNGKEDDILE--PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +LG K+ + P + G V+QVA GG H+V+L +
Sbjct: 205 GEPESGKLGLPKQLLVNHRMPQSVPGIP---EKVVQVACGGGHTVVLTE 250
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 219/544 (40%), Gaps = 117/544 (21%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVY 91
T G V + G G G LG G +V DN+ + G H++ L ++G V+
Sbjct: 1143 TVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVW 1202
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+WG G LG + + + P + + + QIS GDSHS L GTVY WG R
Sbjct: 1203 SWGYGGNGRLGLGSTRNY-YTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRG 1261
Query: 150 SHGSMGLKGEGIQKT--PLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +GL G+ + P +ES+ G I++IA G + + L++ G + GC LG
Sbjct: 1262 --GKLGL-GKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGC----TLG 1314
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS----------KGSILA 255
Q S + ++ P VP TG N FI++ G +L
Sbjct: 1315 FNKQ---SEGLISNIDYV-PQPVP---------DTGFKNVFIAAGPYSCAAINIFGDLLT 1361
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHL-----IKSL---------------------- 288
+GL +LG DS+ + F HL I +L
Sbjct: 1362 WGLGTGYRLGHGDSKDHVAPK---FVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNA 1418
Query: 289 -SDKKFTMLASGQHHSLALNSEGKIYAFGRHD-YGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+K+ +A G H + L G +Y +G ++ G K+ E +EP K I
Sbjct: 1419 HDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSSK-I 1477
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--------------------------- 379
+ IACG+ S AI G+L+ WG + QLG G
Sbjct: 1478 SKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENCINVFAGVDNS 1537
Query: 380 -------KEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACG 431
ED + + G ++ FG G+LGL + ++ V P I ++ + +A G
Sbjct: 1538 GCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTG--VYKLALG 1595
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--ILEPMKIEGKQLNNYTVLQVASGGQHS 489
S + EG LY G G G +LG G + + P+K E K + V +G HS
Sbjct: 1596 TMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTEVK------FVDVCAGSSHS 1649
Query: 490 VILA 493
+ ++
Sbjct: 1650 LAIS 1653
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 160/381 (41%), Gaps = 63/381 (16%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDS-HGSMGLKGEGIQKTPLKLESVSGIVKIA 178
K+ QI+ GD H V L +GTVY WG + + S + E + L S I KIA
Sbjct: 1422 KRIQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSSKISKIA 1481
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G++H + +T G L T GC + GQLG+ RS + P VP I+ V
Sbjct: 1482 CGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSR----------VIPDHVPYIENCIN-V 1530
Query: 239 FTGVYNT----------FISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
F GV N+ F+ G++ FG ++ +LG + ++ + TP I +
Sbjct: 1531 FAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLG-----LGEALTSTVMTPREITT 1585
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
++ LA G HS+ L EG +Y+ G GRLG + S TP+ + +
Sbjct: 1586 VTG--VYKLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVF-TPVKT--EVKFV 1640
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGY---------------------------QLGNGK 380
+ G+ S AI + LYGWG G + G
Sbjct: 1641 DVCAGSSHSLAISVDNELYGWGEGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGN 1700
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSL--QDKTITSIACGNCVSFA 437
+L + G + AFG + YG+LG++ ++ +PS D +T IA S
Sbjct: 1701 HSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVNLDANVTCIATSRYFSSC 1760
Query: 438 IDSEGVLYGWGMGNGYQLGNG 458
+G Y WG+ + +LG G
Sbjct: 1761 STLKGDAYSWGLSSDDRLGVG 1781
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 218/545 (40%), Gaps = 105/545 (19%)
Query: 10 RKQAENPSQKVFVTSE----AVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALV 65
R + NP T + V L + G V C LG G DV + ++
Sbjct: 989 RTKVTNPPSSSRRTKDGAKHTVSHLNVYSWGKVPFNC-------LGQGVDVSTSEYPKII 1041
Query: 66 EDLD--NVVEVVVGGMHTVCLTEDGK-------VYTWGCNDEGALGREAEGDSEFIPQ-- 114
+ +V G H+ L K V+T+G + G LG + +S+ + Q
Sbjct: 1042 PFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQI 1101
Query: 115 --------------------TVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
++ L V I+ G +H++ DG VY+WG ++G +
Sbjct: 1102 GTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGANHTLVTTVDGCVYSWG--MGAYGVL 1159
Query: 155 GLKGEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
G + P+K+ S I K +G+ H + L GN+ + G G+LG + R+
Sbjct: 1160 GTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRN 1219
Query: 212 A-SRNARRGMSFLEPGEVPLKRKH--IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD 268
+ N R E ++ H D F VY T+ +G L LG+
Sbjct: 1220 YYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVY-TWGCCRGGKLG--------LGKIV 1270
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
S+V P +++SL +A G ++LAL++ GKIY +G LG
Sbjct: 1271 SDV--------LEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWG----CTLGFNKQ 1318
Query: 329 SEPVTE-----PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
SE + P P+P K + IA G AI+ G L WG+G GY+LG+G D
Sbjct: 1319 SEGLISNIDYVPQPVPDTGFKNVF-IAAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKD 1377
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD------------KTITSIACG 431
+ + F H R+ + + + V + TP+ LQD K I IA G
Sbjct: 1378 HVAPK-----FVSHLRTRIYIDTLLK-VYDETPM-ELQDNVKAGATNAHDEKRIQQIAVG 1430
Query: 432 NCVSFAIDSEGVLYGWGMGN--GYQLGNGKEDDILEPMKIEGKQLNNYT--VLQVASGGQ 487
+ + G +Y WG+ N GY + + EPM N+++ + ++A G
Sbjct: 1431 DGHGVLLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPM-----LFNHFSSKISKIACGSN 1485
Query: 488 HSVIL 492
HS+ +
Sbjct: 1486 HSLAI 1490
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 150/332 (45%), Gaps = 50/332 (15%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD--SEFIPQTVNLPKKAVQISAG 128
+ ++ G H++ +T +G ++TWGCND G LG +GD S IP V + + + AG
Sbjct: 1477 ISKIACGSNHSLAITVNGLLFTWGCNDNGQLG---QGDLRSRVIPDHVPYIENCINVFAG 1533
Query: 129 ---------DSHSVALLED-GTVYAWGSFRDSHGSMGLKGEGIQKT---PLKLESVSGIV 175
+H + +D GT++ +GS S G +GL GE + T P ++ +V+G+
Sbjct: 1534 VDNSGCICSSNHEDFMKDDYGTLWVFGS--SSCGKLGL-GEALTSTVMTPREITTVTGVY 1590
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
K+A G H V+LT G+L +AG G+LG ++ V + K +
Sbjct: 1591 KLALGTMHSVVLTHEGSLYSAGAGTGGRLG----------TGDTSNYFVFTPVKTEVKFV 1640
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD----- 290
D ++ IS + +G Y E P L++ +
Sbjct: 1641 DVCAGSSHSLAISVDNELYGWGEGKYICSDEKH----------VLEPTLMEVIPSPTGEA 1690
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPSL--QDKTIT 347
K + +A+G +HSL L + G + AFG + YG+LG++ ++ +PS D +T
Sbjct: 1691 KVISAVAAG-NHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVNLDANVT 1749
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
IA S +G Y WG+ + +LG G
Sbjct: 1750 CIATSRYFSSCSTLKGDAYSWGLSSDDRLGVG 1781
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 27/245 (11%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMER-KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
K G + G G+LGLG + T + + V ++ +G MH+V LT +G +Y
Sbjct: 1550 KDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTGVYKLALGTMHSVVLTHEGSLY 1609
Query: 92 TWGCNDEGALGREAEGDSE--FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
+ G G GR GD+ F+ V K V + AG SHS+A+ D +Y WG
Sbjct: 1610 SAGA---GTGGRLGTGDTSNYFVFTPVKTEVKFVDVCAGSSHSLAISVDNELYGWG---- 1662
Query: 150 SHGSMGLKGEGIQKTPLKLESV------SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G E P +E + + ++ + +H ++LT+ G + G GQ
Sbjct: 1663 -EGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQ 1721
Query: 204 LG-RITQRSASRNARRGMSFLE-PGEVPLKRKHIDDVFTGVYNTFISS-KGSILAFGLNN 260
LG +++ +S++ N F++ P V L ++ + T Y + S+ KG ++GL++
Sbjct: 1722 LGVQLSIKSSANN------FIKMPSTVNLD-ANVTCIATSRYFSSCSTLKGDAYSWGLSS 1774
Query: 261 YSQLG 265
+LG
Sbjct: 1775 DDRLG 1779
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE---FI--PQTVNLPKKAVQI 125
V+ V G H++ LT G V +G N G LG + S FI P TVNL I
Sbjct: 1692 VISAVAAGNHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVNLDANVTCI 1751
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI 174
+ S G Y+WG D +G + P + + S I
Sbjct: 1752 ATSRYFSSCSTLKGDAYSWGLSSDDRLGVGFTNNKVVYAPTTIVNTSMI 1800
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 177/376 (47%), Gaps = 51/376 (13%)
Query: 7 KVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE 66
K +R+ + VFV +E G V TCG D GQLG +R T
Sbjct: 34 KAMREVSCGRQHTVFVLAE-----------GTVYTCGSNDYGQLGQDKG-HKRPTVITAL 81
Query: 67 DLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVN--LPKKA 122
D ++ +V G H + + + +V++WG +D G LG EA G++ P+ V +
Sbjct: 82 DTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQI 141
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASG 180
VQ++ G HS+AL DG +++WG+ +SHG +G+ Q P +L S++GI +I +G
Sbjct: 142 VQVACGGKHSLALSNDGRIFSWGN--NSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAG 199
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID--DV 238
H +L+ G + G GQLG + R + L LK HI +
Sbjct: 200 GSHSFVLSKSGAVFGFGRNTFGQLG--LGDTGDRKYPTHVKSLR----SLKVTHISCGEE 253
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
T V ++ G +L FG +Y QLG + N P + L + T LA
Sbjct: 254 HTAV----LTLDGGVLTFGAGSYGQLGH-------NSNNHEALPRKVFELMGLEVTQLAC 302
Query: 299 GQHHSLA-LNSEGKIYAFGRHDYGRLGLK---NVSEPVTEPTP-IP-----SLQDK--TI 346
G+ H++A + S G+IY+FG G+LG K N + P+T P +P SL+++ +
Sbjct: 303 GRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVV 362
Query: 347 TSIACGNCVSFAIDSE 362
+I G +FA+ S+
Sbjct: 363 QAITAGGDQAFALASK 378
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 165/349 (47%), Gaps = 36/349 (10%)
Query: 43 GQGDTGQLGLG---PDVM---ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G+LGLG DV+ + + F + + EV G HTV + +G VYT G N
Sbjct: 5 GAARNGELGLGGIEEDVILAPKEQPFGATKAMR---EVSCGRQHTVFVLAEGTVYTCGSN 61
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
D G LG++ +G T + Q+S GD H++ + + V++WG D G +G
Sbjct: 62 DYGQLGQD-KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG--YDDCGQLGH 118
Query: 157 KGEG---IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
E + P ++ +S IV++A G H + L++ G + + G GQLG
Sbjct: 119 TLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLG----IG 174
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADSE 270
+++N + +P + + G ++F+ SK G++ FG N + QLG D+
Sbjct: 175 STKNQPKPQELTSLTGIPFCQ-----IVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTG 229
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+K P +KSL K T ++ G+ H+ L +G + FG YG+LG N +
Sbjct: 230 DRK-------YPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG-HNSNN 281
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGN 378
P + L +T +ACG + A ++S G +Y +G+G QLG+
Sbjct: 282 HEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGS 330
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 177/405 (43%), Gaps = 68/405 (16%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLK--LESVSGIVKIASGADHFVMLTSRGNLLTA 196
++ WG+ R+ G +GL G E + P + + + +++ G H V + + G + T
Sbjct: 1 MFCWGAARN--GELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTC 58
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY-NTFISSKGSILA 255
G + GQLG+ + +R L + I V G Y N ++ K + +
Sbjct: 59 GSNDYGQLGQ------DKGHKRPTVI-----TALDTQSIQQVSCGDYHNLVVNDKYQVFS 107
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G ++ QLG ++ GN P ++K LS + +A G HSLAL+++G+I+++
Sbjct: 108 WGYDDCGQLGHT---LEAGGNNSR-RPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSW 163
Query: 316 GRHDYGRLGLKNV-SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
G + +G+LG+ + ++P +P + SL I G SF + G ++G+G
Sbjct: 164 GNNSHGQLGIGSTKNQP--KPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFG 221
Query: 375 QLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVS 408
QLG G D +L +G + FG YG+LG N +
Sbjct: 222 QLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG-HNSN 280
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
P + L +T +ACG + A ++S G +Y +G+G QLG+ + P+
Sbjct: 281 NHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPI 340
Query: 468 KIEGK----------QLNNYTVLQVASGGQHSVILAK-----PKP 497
++G + Y V + +GG + LA PKP
Sbjct: 341 TVDGPFVPFAGDNSLEEQCYVVQAITAGGDQAFALASKLQGTPKP 385
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 212/497 (42%), Gaps = 73/497 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV-MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + + G G G+LG+G D E F VV + G HT +T G V+TWG
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGK 266
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G LG ++ + EF P+ +K A +I GD H++ +L G +Y+ G+ ++HG
Sbjct: 267 GLRGQLGHKSVKE-EFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGA--NTHGQ 323
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+GL + P + + ++ I + + LT+ G + G + L RI +
Sbjct: 324 LGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRFV 383
Query: 212 A-----------SRNARRGMSFLEPGEVPLKRKHI-DDVFTGVYNTFISSKGSILAFGLN 259
A +R A + + G++ R ++ + + +F + KG + F +
Sbjct: 384 AGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGH 443
Query: 260 NY------SQLGEADSEVQKSGNTCFFT----PHLIKSLSDKKFTMLASGQHH------- 302
N+ ++G + + ++ +T F + L K S+K L + +
Sbjct: 444 NHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATV 503
Query: 303 ----SLALNSEGKIYAFGRHDYGRLG----LKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
S + +G IY +G+ +GRLG E V P I +L ++ IACG
Sbjct: 504 QVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKD 563
Query: 355 VSFAIDSEGVLYGW--------GMGNGY-------------------QLGNGKEDDILNS 387
+ A+ G +Y W G+G+G Q+ G+ ++
Sbjct: 564 STAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACST 623
Query: 388 E-GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+ K + +G + +G+LG+ ++S + +P I SL++ I SIACG + + G +
Sbjct: 624 DMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMS 683
Query: 447 WGMGNGYQLGNGKEDDI 463
G G QLG+G + +
Sbjct: 684 CGKGWHGQLGHGDYESL 700
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 203/494 (41%), Gaps = 55/494 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKT--------------FALVEDLDNVVEVVVGGMHTV 82
GVVL+CG GQLG+G ++ R T A+++ L+N+V + G H++
Sbjct: 142 GVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSL 201
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSE---FIPQTVNLPKKAVQISAGDSHSVALLEDG 139
L + GK+++WG G LG ++ ++E F+ N K V I+ G H+ A+ G
Sbjct: 202 ALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQN--SKVVHIACGAHHTAAITTVG 259
Query: 140 TVYAWGS-FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
V+ WG R G +K E + L G KI G DH +++ G L + G
Sbjct: 260 DVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKC-GAQKIRCGDDHTLVILRSGQLYSMGA 318
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
GQLG R + L G K ID G + +++ G + AFG
Sbjct: 319 NTHGQLG------LGDATDRIIPTLVTGFA--NEKVIDIDAKGCRSIALTNTGKVFAFGN 370
Query: 259 NNYSQLGEADSEVQKSGNTCFF-----TPHLIKSLSDK----KFTMLASGQHHSLALNSE 309
L V + T H ++SD ++ +S + S L S
Sbjct: 371 ETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESF 430
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI---TSIACGNCVSFAIDSEGVLY 366
I R G + + P T ++K+ + I+ + F SE +L
Sbjct: 431 HAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFP--SEKILP 488
Query: 367 GWGMGNGY--QLGNGKEDDILNSEGK--IYAFGRHDYGRLG----LKNVSEPVTEPTPIP 418
G Y + + D + EG IY +G+ +GRLG E V P I
Sbjct: 489 ALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIE 548
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ--LGNGKEDDILEPMKIEGKQLNN 476
+L ++ IACG + A+ G +Y WG + LG+GK I+ P ++ L++
Sbjct: 549 TLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQ--DLSS 606
Query: 477 YTVLQVASGGQHSV 490
+ V Q++ G H+
Sbjct: 607 HVVCQISLGRNHAA 620
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 213/542 (39%), Gaps = 100/542 (18%)
Query: 39 VLTCGQGDTGQLGLG-PDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGC 95
V G GQLGL P + +E+L+ N+ +V G H++ L+ G+V++WG
Sbjct: 1397 VFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGG 1456
Query: 96 NDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+ G LG E D + P + +P I+ G + S A+ G V+ WG+
Sbjct: 1457 SPFGQLGHETITD-KLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGN--GES 1513
Query: 152 GSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR- 210
G +G + + P ++ S +V+IA G H + + + T +G +
Sbjct: 1514 GELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTF 1573
Query: 211 ----------------------------SASRNARRGMSF--------------LEPGEV 228
SAS R G F L+
Sbjct: 1574 SGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARS 1633
Query: 229 P------LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP 282
P L + + F++ GS+ G + + +LG TP
Sbjct: 1634 PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAP-------TP 1686
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
I+SL+ K +A G +H LAL E ++YA+G +G G+ N ++ V EP + SL
Sbjct: 1687 VEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTND-VLEPQELSSLA 1745
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI----------- 391
+I + G S A+ G L+ WG + QLG G +S KI
Sbjct: 1746 ACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVS 1805
Query: 392 -----------------YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
+ G + G+LGL + + T T + +L D+ I S +CG
Sbjct: 1806 LGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRST-LTAVDALDDRQIVSASCGAAH 1864
Query: 435 SFAIDSEGVLYGWGMGNGYQLG--NGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ A+ G L WG G QLG G DI P+++ + N +++V G + ++++
Sbjct: 1865 TAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPA--ICNDPMVKVVCGQEVTIVV 1922
Query: 493 AK 494
++
Sbjct: 1923 SE 1924
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 187/455 (41%), Gaps = 72/455 (15%)
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN 117
E+K F + D N + V L + +YTWGC G LG + +
Sbjct: 1156 EKKHFEQIRDRAN-------KRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITS 1208
Query: 118 LPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE-----------GIQKT 164
P K V+++ G HS+A DG VYAWG+ G G G
Sbjct: 1209 FPSNTKIVEVACGCEHSLARSFDGGVYAWGA-----GDRGQLGSLENFDCVKINYAFNPQ 1263
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
P+ I+ IA G H + LTS +L+ G E GQLG + S+ + + L+
Sbjct: 1264 PVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLG--LDHNLSKGTPQMVKALD 1321
Query: 225 PGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
G P K + G ++ I G IL +G N Y QLG D++ +C P +
Sbjct: 1322 -GRAPCKI-----LCGGWHSAAILESGKILLWGKNVYGQLGHGDTK------SC-SAPRV 1368
Query: 285 IKSLS-DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQ 342
+ L + K G +H+L + K++A G + G+LGL + S P I L
Sbjct: 1369 NQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELN 1428
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
K I +A G+ S A+ G ++ WG QLG+ D L
Sbjct: 1429 GKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKL----------------- 1471
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
P+ E IP + SIACG S A+ ++G ++ WG G +LG+ +
Sbjct: 1472 ----APTPLLERHKIP----PDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVL 1523
Query: 463 ILEPMKIEGKQLNNYTVLQVASGGQHSV-ILAKPK 496
P I+ + V+Q+A G +H I+ KP+
Sbjct: 1524 TYAPSLIK----DFSEVVQIACGFKHMAGIVFKPR 1554
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 157/358 (43%), Gaps = 57/358 (15%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVV--VGGMHTVCLTEDGKVYTW 93
G V G G+ G+LG + ++ + +V NV+ V +G HT+ L+ DG V +
Sbjct: 89 GSHVFMWGDGENGKLGNQSEEIQHVPY-IVPAFRNVLVKVCALGKQHTLFLSADGVVLSC 147
Query: 94 GCNDEGALGREAEGDSEFIPQTVNLPKKA----------------VQISAGDSHSVALLE 137
G N G LG S P V+ P K V I+AG HS+AL +
Sbjct: 148 GSNVYGQLGMGDHMLSRSTP--VSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLT 195
G +++WGS S G +G+ + ++P + S+ S +V IA GA H +T+ G++ T
Sbjct: 206 TGKIFSWGS--GSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWT 263
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G +GQLG + + + R S + G ++ DD + I G + +
Sbjct: 264 WGKGLRGQLGHKSVKE-EFSPRLNASLRKCGAQKIRCG--DD-----HTLVILRSGQLYS 315
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G N + QLG D+ T P L+ +++K + + S+AL + GK++AF
Sbjct: 316 MGANTHGQLGLGDA-------TDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAF 368
Query: 316 GRHDYGRLGLKNVSEPVTEPTP-----IPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G N +EP P +P + I ++A FAI G L+ W
Sbjct: 369 G----------NETEPHLNRIPRFVAGLP--KSDLIIAVARTAHFDFAISDTGQLFRW 414
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 155/346 (44%), Gaps = 42/346 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ GQLG+ + ++ +L++ L ++V + + +T+ G +Y G
Sbjct: 1610 GCVFVWGEDTCGQLGI-RGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
++ G LG G P V + K ++++ G H +AL E+ VYAWG +
Sbjct: 1669 GSEHGRLGL---GHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGK-- 1723
Query: 151 HGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G+ G+ P +L S++ I+ + +G H L+ G+L G GQLG T
Sbjct: 1724 WGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGT 1783
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHID----DVFTGVYNTFI---SSKGSILAFGLNNY 261
+A + P K ++D DV G ++ + + ++ GLN
Sbjct: 1784 TSAAE-------------DSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNAN 1830
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG D V +S T + +L D++ + G H+ A++ G + +G G
Sbjct: 1831 GQLGLGDF-VDRSTLTA------VDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNG 1883
Query: 322 RLGLK-NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
+LGLK +S+ + P +P++ + + + CG V+ + +G LY
Sbjct: 1884 QLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELY 1929
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 33/311 (10%)
Query: 87 DGKVYTWGCNDEGALGREAEG-DSEFIPQTVNLPKK--------AVQISAGDSHSVALLE 137
DG +YT+G +G GR G + ++V PK+ V I+ G + AL +
Sbjct: 514 DGYIYTYG---KGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTD 570
Query: 138 DGTVYAWGSFRDSHGSMGL-KGEGIQ-KTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
G VY WG + + G +GL G+ + P ++ +S + +I+ G +H T
Sbjct: 571 TGKVYTWG--KSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF 628
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFL-EPGEV-PLKRKHIDDVFTGVYNTFISSK- 250
G GQLG I S S++ +P E+ L+ +I + G ++T IS+
Sbjct: 629 FVWGSNTFGQLG-IPHIS---------SYMPDPYEITSLREANIRSIACGGWHTLISTNT 678
Query: 251 GSILAFGLNNYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
GS+++ G + QLG D E + T + +++ D +++G+ S A+ ++
Sbjct: 679 GSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK 738
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G+++ +G+ D +LG ++ S+ P + + ++ G+ A+D G+ Y WG
Sbjct: 739 GRLFTWGKGDEYQLGHES-SKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWG 797
Query: 370 MGNGYQLGNGK 380
G+ QLG+G+
Sbjct: 798 NGSAGQLGHGE 808
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 148/362 (40%), Gaps = 84/362 (23%)
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VKI-ASGADHFVMLTSRGNL 193
L+ V+ WG +G +G + E IQ P + + + VK+ A G H + L++ G +
Sbjct: 87 LQGSHVFMWGD--GENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVV 144
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-------------VFT 240
L+ G GQLG + SR+ P P K+K +D +
Sbjct: 145 LSCGSNVYGQLG-MGDHMLSRST--------PVSEPSKQKSLDKLQAIIQSLNNIVGIAA 195
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
G Y++ ++ G I ++G ++ +LG +A++E +P + SL + K +
Sbjct: 196 GYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE----------SPRFVASLQNSKVVHI 245
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A G HH+ A+ + G ++ +G+ G+LG K+V E + P SL+ I CG+ +
Sbjct: 246 ACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFS-PRLNASLRKCGAQKIRCGDDHT 304
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGK 390
I G LY G QLG G D L + GK
Sbjct: 305 LVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGK 364
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTP-----IPSLQDKTITSIACGNCVSFAIDSEGVLY 445
++AFG N +EP P +P + I ++A FAI G L+
Sbjct: 365 VFAFG----------NETEPHLNRIPRFVAGLP--KSDLIIAVARTAHFDFAISDTGQLF 412
Query: 446 GW 447
W
Sbjct: 413 RW 414
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 147/319 (46%), Gaps = 23/319 (7%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMER----KTFALVEDLD--NVVEVVVGGMHTVCLTE 86
+ G G + T G+G G+LG G + K +E L +VV + G T LT+
Sbjct: 511 REGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTD 570
Query: 87 DGKVYTWGCNDEGALGR-EAEGDSEFIPQTV-NLPKKAV-QISAGDSHSVALLEDGTVYA 143
GKVYTWG + +G LG + + +PQ V +L V QIS G +H+ + +
Sbjct: 571 TGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFV 630
Query: 144 WGSFRDSHGSMGLKG-EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCPE 200
WGS ++ G +G+ P ++ S+ + I IA G H ++ T+ G++++ G
Sbjct: 631 WGS--NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGW 688
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLN 259
GQLG S + ++ + + + I V G ++ I++KG + +G
Sbjct: 689 HGQLGHGDYESLTALSKT-LPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKG 747
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG + S N + P ++ + + ++ G H LAL+ G Y++G
Sbjct: 748 DEYQLGH-----ESSKNEAY--PREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGS 800
Query: 320 YGRLGLKNVSEPVTEPTPI 338
G+LG + E T P PI
Sbjct: 801 AGQLGHGEMCERETLPRPI 819
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P L++ LS ++ G++H+ K + +G + +G+LG+ ++S + +P I S
Sbjct: 597 VPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITS 656
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
L++ I SIACG + + G + G G QLG+G DY
Sbjct: 657 LREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHG------------------DYE 698
Query: 401 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
L + + P + + D I ++ G S AI ++G L+ WG G+ YQLG+
Sbjct: 699 SLTALSKTLPYFKKI-VEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESS 757
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+ P ++E V+ V+ G H + L
Sbjct: 758 KNEAYPREVE--FFAKIRVVDVSIGDSHMLAL 787
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 32/246 (13%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ +G +LG E+Q P+++ + + + A G+ H+L L+++G +
Sbjct: 92 VFMWGDGENGKLGNQSEEIQH-------VPYIVPAFRNVLVKVCALGKQHTLFLSADGVV 144
Query: 313 YAFGRHDYGRLGLKN----VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+ G + YG+LG+ + S PV+EP+ SL + N V
Sbjct: 145 LSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIV------------- 191
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G+ GY LN GKI+++G +G+LG+ + + P + SLQ+ + I
Sbjct: 192 GIAAGYY-----HSLALNDTGKIFSWGSGSWGKLGIGSDAN-AESPRFVASLQNSKVVHI 245
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
ACG + AI + G ++ WG G QLG+ + P L ++ G H
Sbjct: 246 ACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRL--NASLRKCGAQKIRCGDDH 303
Query: 489 SVILAK 494
++++ +
Sbjct: 304 TLVILR 309
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 161/341 (47%), Gaps = 47/341 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDL--DNVVEVVVGGMHTVCLTEDGKV 90
T G +V + G GQLG+G ++ K LVE L + + G HT+ TE G V
Sbjct: 132 TTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDV 191
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNL-------PKKAVQISAGDSHSVALLEDGTVYA 143
Y+WG GALG D +F+P+ +++ + +Q+SAG S L + G VY
Sbjct: 192 YSWGQGIFGALG-AGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYT 250
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK-IASGADHFVMLTSRGNLLTAGCPEQG 202
G ++ G +G+ G + P+ ++ V IA G H +MLT +G + + G G
Sbjct: 251 CG--QNDAGQLGIGGRDQENIPISIKKFPERVSMIACGQMHLLMLTKQGTVYSCGANSFG 308
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS-SKGSILAFGLNNY 261
QLG + RN+ + + +P++ V G ++ IS G + +G +
Sbjct: 309 QLG----LNNKRNSSSPLLIQDISHIPMRY-----VAAGSFSASISYDSGDLYLWGSGVF 359
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS-GQHHSLALNSEGKIYAFGRHDY 320
GE F TPH +K++ K T+ S G H +A+N +G +Y++G ++
Sbjct: 360 ---GE------------FLTPHRVKTI--KGMTVSVSIGNHFGIAVNQDGIVYSWGHNNS 402
Query: 321 GRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGNCVSFAI 359
G LG + E PTP I L DK +T ++CG S A+
Sbjct: 403 GELGQGDFDE---RPTPQIINQLNDKIVTLVSCGRNFSIAL 440
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 181/416 (43%), Gaps = 66/416 (15%)
Query: 89 KVYTWGCNDEGALG--REAEGDSEFIPQ--TVNLPKKAVQISAGDSHSVALLEDGTVYAW 144
++++WG + G LG + G S +P+ T N+ K V S GD H+ + VY+
Sbjct: 83 EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYV--SCGDEHAAFITTGNMVYSM 140
Query: 145 GSFRDSH---GSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGCP 199
GS + G M LK ++ +P+ +E++ + IA GA+H ++ T RG++ + G
Sbjct: 141 GSNTNGQLGVGDMSLK---MKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWG-- 195
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
QG G + + + + ++ K + I ++ + G + G N
Sbjct: 196 -QGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQN 254
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG G P IK + + +M+A GQ H L L +G +Y+ G +
Sbjct: 255 DAGQLGIG-------GRDQENIPISIKKFPE-RVSMIACGQMHLLMLTKQGTVYSCGANS 306
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN-CVSFAIDSEGVLYGWGMGNGYQLGN 378
+G+LGL N + P I + + +A G+ S + DS G LY WG G
Sbjct: 307 FGQLGLNN-KRNSSSPLLIQDISHIPMRYVAAGSFSASISYDS-GDLYLWGSG------- 357
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
FG E +T P + +++ T+ S++ GN A+
Sbjct: 358 --------------VFG-------------EFLT-PHRVKTIKGMTV-SVSIGNHFGIAV 388
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ +G++Y WG N +LG G D+ P I QLN+ V V+ G S+ L +
Sbjct: 389 NQDGIVYSWGHNNSGELGQGDFDERPTPQII--NQLNDKIVTLVSCGRNFSIALGQ 442
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 169/430 (39%), Gaps = 103/430 (23%)
Query: 39 VLTCGQGDTGQLGLGPDVMERK-------TFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
+ + G GQLGLG + + T+ + + V G H +T VY
Sbjct: 84 IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNI-----GIKYVSCGDEHAAFITTGNMVY 138
Query: 92 TWGCNDEGALGREAEGDSEF----IPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWG 145
+ G N G LG GD P V + +K + I+ G +H++ E G VY+WG
Sbjct: 139 SMGSNTNGQLGV---GDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWG 195
Query: 146 SFRDSHGSMGLKGEG----------IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
G G G G I + +L + S ++++++G +L G + T
Sbjct: 196 -----QGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYT 250
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSK 250
G + GQL G+ + +P+ K + + + + ++ +
Sbjct: 251 CGQNDAGQL--------------GIGGRDQENIPISIKKFPERVSMIACGQMHLLMLTKQ 296
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G++ + G N++ QLG + N+ +P LI+ +S +A+G + G
Sbjct: 297 GTVYSCGANSFGQLG-----LNNKRNSS--SPLLIQDISHIPMRYVAAGSFSASISYDSG 349
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y +G +G P + +++ T+ S++ GN A++ +G++Y WG
Sbjct: 350 DLYLWGSGVFGEF---------LTPHRVKTIKGMTV-SVSIGNHFGIAVNQDGIVYSWGH 399
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSI 428
N +LG G D+ PTP I L DK +T +
Sbjct: 400 NNSGELGQGDFDE-----------------------------RPTPQIINQLNDKIVTLV 430
Query: 429 ACGNCVSFAI 438
+CG S A+
Sbjct: 431 SCGRNFSIAL 440
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDL----DNVVEVVVGGM 79
A TL C T G V + GQG G LG G D K + D +++V G
Sbjct: 179 ANHTLVC-TERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMR 237
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLED 138
+ L + G+VYT G ND G LG D E IP ++ P++ I+ G H + L +
Sbjct: 238 FSAILDQSGRVYTCGQNDAGQLGIGGR-DQENIPISIKKFPERVSMIACGQMHLLMLTKQ 296
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTA 196
GTVY+ G+ +S G +GL + +PL ++ +S I +A+G+ + G+L
Sbjct: 297 GTVYSCGA--NSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLW 354
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF---ISSKGSI 253
G G G FL P V + V G N F ++ G +
Sbjct: 355 GS---GVFG---------------EFLTPHRVKTIKGMTVSVSIG--NHFGIAVNQDGIV 394
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
++G NN +LG+ D + + TP +I L+DK T+++ G++ S+AL
Sbjct: 395 YSWGHNNSGELGQGDFDERP-------TPQIINQLNDKIVTLVSCGRNFSIAL 440
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 179/419 (42%), Gaps = 57/419 (13%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQ-ISA 127
+V ++ G HT +T G+V++WG G LG + D PQ ++ L VQ ++
Sbjct: 124 DVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAH-PQLIDSLASSTVQYVAC 182
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK----LESVSGIVKIASGADH 183
G+ HS A+ + G +Y WG + G +G TP + LE V + +A G H
Sbjct: 183 GEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR-VSSVACGPWH 241
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASR----NARRGMSFLEPGEVPLKRKHIDDVF 239
V++TS G L + G G LG ++SAS + +G+ L P + +V
Sbjct: 242 TVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM 301
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+ N S G + +G + ++LG D E + P + +L D F +A G
Sbjct: 302 SRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQK-------LVPTCVAALVDHNFRQVACG 354
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP-IPSLQDKTITSIACGNCVSFA 358
++AL + G +Y G YG+LG T P + L I ++CG A
Sbjct: 355 HSLTVALTTTGHLYTMGSVSYGQLG----DPQATGRLPGVLRLGRTLIEEVSCGAYHVAA 410
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+ S+G + WG G +LG+G +D ++V PT +
Sbjct: 411 LTSKGDVCTWGKGANGRLGHGDAED---------------------RDV------PTLVE 443
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
+L+DK + ++CG+ + AI L+ G G G GN +P K+ N Y
Sbjct: 444 ALRDKQVKKVSCGSSFTSAI----CLHKSGPGVG--TGNSMCSGCRQPFGFTRKKHNCY 496
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 162/409 (39%), Gaps = 72/409 (17%)
Query: 111 FIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL 168
F+P+ V + QI+ G H+ + G V++WG +S G +G + P +
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGE--ESGGRLGHGVDADVAHPQLI 169
Query: 169 ESV--SGIVKIASGADHFVMLTSRGNLLTAG--CPEQGQLGRITQRSASRNARRGMSFLE 224
+S+ S + +A G H +T G+L T G G LG +S
Sbjct: 170 DSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNS----------ISHWT 219
Query: 225 PGEV--PLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
P V PL+ + V G ++T ++S G + +FG + LG D +KS +
Sbjct: 220 PKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD---RKSASM---- 272
Query: 282 PHLIKSLSDKKFTMLASGQHHSLAL------------NSEGKIYAFGRHDYGRLGLKNVS 329
P ++SL K A G H+ A+ + GK++ +G D RLG +
Sbjct: 273 PREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKE 332
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
+ + PT + +L D +ACG+ ++ A L + G
Sbjct: 333 QKLV-PTCVAALVDHNFRQVACGHSLTVA--------------------------LTTTG 365
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTP-IPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
+Y G YG+LG T P + L I ++CG A+ S+G + WG
Sbjct: 366 HLYTMGSVSYGQLG----DPQATGRLPGVLRLGRTLIEEVSCGAYHVAALTSKGDVCTWG 421
Query: 449 MGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPKP 497
G +LG+G +D P +E + + S ++ L K P
Sbjct: 422 KGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSGP 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 114/274 (41%), Gaps = 51/274 (18%)
Query: 265 GEADSEVQKSGNTCF----FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
G D V K +T F F P ++SL +A G H+ + +G+++++G
Sbjct: 93 GIGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESG 152
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG--NGYQLGN 378
GRLG V V P I SL T+ +ACG S A+ G LY WG G N LG+
Sbjct: 153 GRLG-HGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGH 211
Query: 379 GKEDD---------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G ++ S G++++FG +G LG + +
Sbjct: 212 GNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSA 270
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAI------------DSEGVLYGWGMGNGYQLGNGK 459
+ P + SL+ ACG + A+ G L+ WG G+ +LG+G
Sbjct: 271 SMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGD 330
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
++ L P + L ++ QVA G HS+ +A
Sbjct: 331 KEQKLVPTCVAA--LVDHNFRQVACG--HSLTVA 360
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 153/341 (44%), Gaps = 42/341 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T G VL G +GQLG G R T V DL V V G H++ +T G V
Sbjct: 109 TSAGTVLAWGANSSGQLGDG-TTTPRSTPVAV-DLPAGTTVTAVAAGDRHSLAVTSTGTV 166
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG N G L + P V+LP ++AG++HS+AL GTV AWG+
Sbjct: 167 LAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGA-- 224
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD---HFVMLTSRGNLLTAGCPEQGQLG 205
+S G +G + TP+ ++ +G A H + +TS G +L G GQLG
Sbjct: 225 NSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLG 284
Query: 206 --RITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGV-YNTFISSKGSILAFGLNNY 261
IT RS P V L + V TG ++ ++S G++LA+G N
Sbjct: 285 DGTITNRS------------TPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGS 332
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG+ + T TP + + T +A G HSLAL S G + A+G + G
Sbjct: 333 GQLGDGST-------TSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSG 385
Query: 322 RLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+LG N S P+ P D TIT+IA G+ S A+
Sbjct: 386 QLGDGTTSNRSTPIATDLP----ADTTITAIAGGSFHSLAV 422
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 189/433 (43%), Gaps = 68/433 (15%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDS 130
V+ G+ + G WG N E LG + + P TV+LP ++AG
Sbjct: 45 PVLAQGVPSAAAGPPGTGLAWGDNAESQLG-DGTTTNRSTPVTVDLPADTTITAVAAGQG 103
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT 188
HS+A+ GTV AWG+ +S G +G + TP+ ++ +G + +A+G H + +T
Sbjct: 104 HSLAVTSAGTVLAWGA--NSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVT 161
Query: 189 SRGNLLTAGCPEQGQL--GRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTG-VYN 244
S G +L G GQL G T S++ P V L + V G ++
Sbjct: 162 STGTVLAWGLNVTGQLYDGTTTTNSST-----------PIVVDLPAGTTVTAVAAGNAHS 210
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHS 303
++S G++LA+G N+ QLG+ + + TP + T+ AS HS
Sbjct: 211 LALTSAGTVLAWGANSSGQLGDGTTTPRS-------TPVAVDLPAGTTISTIAASSSSHS 263
Query: 304 LALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
LA+ S G + A+G + G+LG + N S PV P T+T++A G+ S A+
Sbjct: 264 LAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLP----AGTTVTAVATGSGHSLAVT 319
Query: 361 SEGVLYGWGMGNGY-QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
S G + WG GNG QLG+G + S PV P
Sbjct: 320 STGTMLAWG-GNGSGQLGDGST-----------------------TSSSTPVAVDLP--- 352
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
T+T++A G S A+ S G + WG QLG+G + P+ + + T+
Sbjct: 353 -AGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDLPA--DTTI 409
Query: 480 LQVASGGQHSVIL 492
+A G HS+ +
Sbjct: 410 TAIAGGSFHSLAV 422
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 36/244 (14%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P + SDK TM+AS G+H+ LAL +G +Y++G D GRLG + EP I
Sbjct: 557 PQRVHGFSDKPITMIASHADGKHY-LALTQDGCVYSWGNGDGGRLGHGDTIS-YDEPKLI 614
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN------------ 386
+L +K I IACG+ S A+ + G LY WG GN +LG+G DD++
Sbjct: 615 EALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTV 674
Query: 387 ----------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ G ++++G DYG+LG + ++ P + L D + + C
Sbjct: 675 VHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG-RGGTDGSKTPKIVDKLLDINVVKVFC 733
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G+ S A+ + G +Y WG G+ Y+LG+G E+ + P IE L + V ++ G H +
Sbjct: 734 GSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES--LRDRKVKDLSVGTTHIL 791
Query: 491 ILAK 494
L +
Sbjct: 792 ALTE 795
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 179/414 (43%), Gaps = 58/414 (14%)
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAW 144
+ VY WG ND+ LG + + L K K + I+ G + ++G +YA
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
G ++G +GL + P + +S V K+A SG H + LT G + + G E
Sbjct: 3070 G--EGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3127
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGV-YNTFISSKGSILAFGL 258
G+LG +S +P + LK K I D+ G ++ I+S G + +GL
Sbjct: 3128 DGKLGH----------GNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGL 3177
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFG 316
Y +LG D+ Q P L+++L + +A G ++AL ++G +Y++G
Sbjct: 3178 GEYGRLGHGDTITQTR-------PKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWG 3230
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
D+G+LG + S+ P + L + + + CG S A+ G ++ WG G+ ++L
Sbjct: 3231 DGDFGKLG-RGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRL 3289
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G + V +PT + L+ K I +A G
Sbjct: 3290 GHGND---------------------------HHVRKPTLVEGLRGKKIIHVAVGALHCL 3322
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ G +Y WG + Q GNG +P + L + V +V+ G HS+
Sbjct: 3323 AVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVH--DLEDARVNRVSCGSSHSI 3374
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 170/397 (42%), Gaps = 67/397 (16%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P ES+S + +++A G +T+ G + +
Sbjct: 3994 GAIYGWG--HNHRGQLGGLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G GR+ G+ + +P + I VF G + +
Sbjct: 4051 TG---YGAAGRL-----------GIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIAL 4096
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
SS+G + ++G + +LG + + P LI+ L + +A G HHS A+
Sbjct: 4097 SSEGHVYSWGEGDDGKLGHGN-------KVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT 4149
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVL 365
S G +Y +G+ YGRLG + S+ P + +LQD + +ACG + + + + +
Sbjct: 4150 SAGWLYTWGKGRYGRLGHGD-SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4208
Query: 366 YGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHDY 399
+ WG G+ +LG G D L G +Y +G+ DY
Sbjct: 4209 WSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDY 4268
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4269 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGT 4327
Query: 460 EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + L + +VA G H++ + K
Sbjct: 4328 TSALHRPRLVHA--LQGKKITRVACGSAHTLAWSTAK 4362
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 180/419 (42%), Gaps = 69/419 (16%)
Query: 35 GGGVVLTCGQGDTGQLG--LGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKV 90
G G + G GQLG GP V K A E L + + + GG T+ +T DGK+
Sbjct: 3992 GSGAIYGWGHNHRGQLGGLEGPKV---KLPAPCESLSALRPIQLAGGEQTLFAVTADGKI 4048
Query: 91 YTWGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAW 144
Y+ G GA GR G DS IP + ++ K V +S+G H +AL +G VY+W
Sbjct: 4049 YSTG---YGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSW 4105
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
G D G +G + P +E + G IV IA G H +TS G L T G +G
Sbjct: 4106 GEGDD--GKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG---KG 4160
Query: 203 QLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGL 258
+ GR+ + R P V L+ + DV G ++ ++ ++G
Sbjct: 4161 RYGRLGHGDSDDQLR-------PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4213
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+Y +LG S+ K P I SL+ + G S+AL G +Y +G+
Sbjct: 4214 GDYGKLGRGGSDGCK-------VPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4266
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
DY RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+
Sbjct: 4267 DYHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGD 4325
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G + + P + +LQ K IT +ACG+ + A
Sbjct: 4326 G---------------------------TTSALHRPRLVHALQGKKITRVACGSAHTLA 4357
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFALVED-LDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D + E K + + V V GG H + LT
Sbjct: 3056 TLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALT 3115
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYA 143
+DGKV++WG ++G LG S P+ + + K+ I+ G HS A+ +G +Y
Sbjct: 3116 QDGKVFSWGEGEDGKLG-HGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYT 3174
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCP 199
WG +G +G Q P ++++ G +V++A G+ + LT+ G + + G
Sbjct: 3175 WG--LGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDG 3232
Query: 200 EQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
+ G+LGR T R G+ +E G ++ ++ G +
Sbjct: 3233 DFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECG--------------AQFSLALTKYGEV 3278
Query: 254 LAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+G +Y +LG D V+K P L++ L KK +A G H LA+ G++
Sbjct: 3279 WTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 3330
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
YA+G +D+G+ G + +P+ + L+D + ++CG+ S A
Sbjct: 3331 YAWGDNDHGQQG-NGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIA 3375
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 172/382 (45%), Gaps = 73/382 (19%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGC 198
V AWG + +GS TP ++++ GI ++ ++L+ GN+
Sbjct: 501 VLAWGGVKFGNGS----------TPFYCDAIAELGIKQLCCTERALMILSLNGNVYN--- 547
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGL 258
+ S ++ +R F + + + H D G + ++ G + ++G
Sbjct: 548 --------MYHGSETQYPQRVHGFSDK-PITMIASHAD----GKHYLALTQDGCVYSWGN 594
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
+ +LG D+ + P LI++L +K +A G +S AL++ G++Y +GR
Sbjct: 595 GDGGRLGHGDT-------ISYDEPKLIEALLEKNIIFIACGSTYSAALSANGELYTWGRG 647
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQL 376
+YGRLG N + +T PT + +L+ T+ +ACG + + + + G+++ WG G+ +L
Sbjct: 648 NYGRLGHGNFDDVMT-PTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 706
Query: 377 GNGKED------------DI--------------LNSEGKIYAFGRHDYGRLGLKNVSEP 410
G G D DI L + G++Y +G+ D RLG E
Sbjct: 707 GRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG-HGSEEH 765
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V P I SL+D+ + ++ G A+ + +YGWG N Y G+ D L P+ E
Sbjct: 766 VRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGR-NDY----GQIDPTLGPIISE 820
Query: 471 GK---QLNNYTVLQVASGGQHS 489
L++ TV+ +ASG S
Sbjct: 821 PTLCPTLSSKTVIGLASGPTQS 842
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 164/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G + + G G G+LG+G P ++E ++ V V GG H
Sbjct: 4038 TLFAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKK----VAVSSGGKHC 4093
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDG 139
+ L+ +G VY+WG D+G LG S P+ + L + V I+ G HS A+ G
Sbjct: 4094 IALSSEGHVYSWGEGDDGKLG-HGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAG 4152
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLLT 195
+Y WG R +G +G Q P +E++ ++ +A SG + +T N+ +
Sbjct: 4153 WLYTWGKGR--YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWS 4210
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF-TGV--------YNTF 246
G + G+LG RG S + +VPLK ID + GV ++
Sbjct: 4211 WGDGDYGKLG------------RGGS--DGCKVPLK---IDSLAGLGVVKVECGSQFSVA 4253
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G++ +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4254 LTRSGAVYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4305
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ +G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4306 CSDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4357
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 142/290 (48%), Gaps = 31/290 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGD--SEFIPQTVN--LPKKAVQISAGDSHSV 133
G H + LT+DG VY+WG D G LG GD S P+ + L K + I+ G ++S
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLG---HGDTISYDEPKLIEALLEKNIIFIACGSTYSA 633
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTS 189
AL +G +Y WG R ++G +G TP + ++ G +V +A SG + +T+
Sbjct: 634 ALSANGELYTWG--RGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFIS 248
G + + G + G+LGR S+ + L+ V VF G ++ ++
Sbjct: 692 SGIVFSWGDGDYGKLGR-GGTDGSKTPKIVDKLLDINVV--------KVFCGSQFSAALT 742
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G + +G + +LG E + P +I+SL D+K L+ G H LAL
Sbjct: 743 AHGEVYTWGKGDAYRLGHGSEEHVR-------YPKVIESLRDRKVKDLSVGTTHILALTE 795
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ +Y +GR+DYG++ + ++EPT P+L KT+ +A G SFA
Sbjct: 796 DQFVYGWGRNDYGQID-PTLGPIISEPTLCPTLSSKTVIGLASGPTQSFA 844
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 51/296 (17%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
I IAS AD H++ LT G + + G + G+LG +S+ EP + L
Sbjct: 568 ITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGH----------GDTISYDEPKLIEAL 617
Query: 231 KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G Y+ +S+ G + +G NY +LG + + TP L+ +L
Sbjct: 618 LEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDD-------VMTPTLVTTLK 670
Query: 290 DKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+A SG +L + + G ++++G DYG+LG + ++ P + L D +
Sbjct: 671 GHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG-RGGTDGSKTPKIVDKLLDINVV 729
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------- 384
+ CG+ S A+ + G +Y WG G+ Y+LG+G E+ +
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTH 789
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +Y +GR+DYG++ + ++EPT P+L KT+ +A G SFA
Sbjct: 790 ILALTEDQFVYGWGRNDYGQID-PTLGPIISEPTLCPTLSSKTVIGLASGPTQSFA 844
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 170/406 (41%), Gaps = 76/406 (18%)
Query: 75 VVGGMHTV-CLTEDGKVYTWGCNDEGALGREAEGDS------EFIPQTVNLPKKAVQISA 127
+ GG T+ ++++GK+Y G EG GR GD + IP K V + +
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACG---EGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHS 3106
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHF 184
G H++AL +DG V++WG D G +G G I KL V I IA G+ H
Sbjct: 3107 GGKHALALTQDGKVFSWGEGED--GKLG-HGNCISLDKPKLIEVLKSKRIRDIACGSGHS 3163
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVY 243
+ S G L T G E G+LG + +R P V H + V G
Sbjct: 3164 AAIASNGELYTWGLGEYGRLGHGDTITQTR----------PKLVQALIGHRVVQVACGSR 3213
Query: 244 NT---FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
+ +++ G + ++G ++ +LG + G+ +TP L+ L++ + G
Sbjct: 3214 DAQTMALTTDGYVYSWGDGDFGKLG-------RGGSDGCYTPLLVDRLNNLGVIQVECGA 3266
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
SLAL G+++ +G+ DY RLG N V +PT + L+ K I +A G A+
Sbjct: 3267 QFSLALTKYGEVWTWGKGDYFRLGHGN-DHHVRKPTLVEGLRGKKIIHVAVGALHCLAVT 3325
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G +Y WG + Q GNG + +P+ + L
Sbjct: 3326 DTGQVYAWGDNDHGQQGNG---------------------------TTSVNRKPSLVHDL 3358
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+D + ++CG+ S A W + + Q NG +D + P
Sbjct: 3359 EDARVNRVSCGSSHSIA---------WVLVD--QPSNGNQDPVTFP 3393
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 37/285 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G D + L+E L N++ + G ++ L+ +G++Y
Sbjct: 584 TQDGCVYSWGNGDGGRLGHG-DTISYDEPKLIEALLEKNIIFIACGSTYSAALSANGELY 642
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSF 147
TWG + G LG D P V K V +GDS ++ + G V++WG
Sbjct: 643 TWGRGNYGRLG-HGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGD- 700
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+G +G G KTP ++ + I VK+ G+ LT+ G + T G + +LG
Sbjct: 701 -GDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG 759
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQ- 263
S R +E L+ + + D+ G + ++ + +G N+Y Q
Sbjct: 760 H-----GSEEHVRYPKVIE----SLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810
Query: 264 ---LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
LG SE P L +LS K LASG S A
Sbjct: 811 DPTLGPIISE-----------PTLCPTLSSKTVIGLASGPTQSFA 844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G GD G+LG G KT +V+ L NVV+V G + LT G+
Sbjct: 688 CVTASGIVFSWGDGDYGKLGRG-GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGE 746
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFR 148
VYTWG D LG +E + +L + V+ +S G +H +AL ED VY WG R
Sbjct: 747 VYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWG--R 804
Query: 149 DSHGSM 154
+ +G +
Sbjct: 805 NDYGQI 810
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLGN------------------------GKEDDI--LNSEG 389
+ + D G +YGWG + QLG G E + + ++G
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADG 4046
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG----NCVSFAIDSEGVLY 445
KIY+ G GRLG+ ++ V PT + S+Q I +A +C+ A+ SEG +Y
Sbjct: 4047 KIYSTGYGAAGRLGIGG-TDSVMIPTLLESIQHVFIKKVAVSSGGKHCI--ALSSEGHVY 4103
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG G+ +LG+G + P IE L ++ +A GG HS +
Sbjct: 4104 SWGEGDDGKLGHGNKVSYDRPKLIE--DLLGVEIVDIACGGHHSAAI 4148
>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 740
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 200/426 (46%), Gaps = 72/426 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA---VQISAGDSHSVALLEDGTVYAWGS 146
V+T+G N GALG + + +P+T+++P KA V + AG+ S L + +Y+WG
Sbjct: 12 VFTFGSNAHGALGFDQSIKVQLVPRTLDVPVKAANAVHVVAGNGASTLLTDGWEIYSWGK 71
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
++G + ++K L+ +S +++++ G++H + S G + G E L
Sbjct: 72 ------TVGTNNQSVRK----LQQLSNVLEVSHGSNHSATVLSSGEVY--GWGEMSFLEG 119
Query: 207 ITQRSASRNARRGMSF----LEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYS 262
+ ++ + R+ ++F L +V +H+ + + G +++ G N+
Sbjct: 120 LRRKRTIKQPRK-LTFDKVQLNAKQVACGDRHV---------CILQNDGMLMSLGANDAG 169
Query: 263 QLG--EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE-GKIYAFGRHD 319
QLG E + N SLS+ +F +A G +H +A++++ G ++++G
Sbjct: 170 QLGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCVAISAQDGALFSWGWGT 229
Query: 320 YGRLGLKNVSEPVT-EPTPIPSLQD-KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
GRLG ++SE + +PT + +L + T +ACG + A EG +YG+G NG+
Sbjct: 230 NGRLG--HMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEGDVYGFGW-NGHSQV 286
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
G E D L P+ L+++ + ++CG S A
Sbjct: 287 AGGETDCLK-----------------------------PMLCLENQGVVRLSCGFAHSAA 317
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE----GKQLNNYTVLQVASGGQHSV-IL 492
I S G L+ WGM + Q G G E+ + P ++E G + + V+ VA G H+V +L
Sbjct: 318 ISSSGSLFTWGMNDDGQCGVGNEETVPRPTRVEFEDRGGRYEGH-VISVACGHSHTVCVL 376
Query: 493 AKPKPN 498
+ P+
Sbjct: 377 SNYTPS 382
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 160/363 (44%), Gaps = 48/363 (13%)
Query: 39 VLTCGQGDTGQLGLGPDVMER---KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V T G G LG + + +T + N V VV G + LT+ ++Y+WG
Sbjct: 12 VFTFGSNAHGALGFDQSIKVQLVPRTLDVPVKAANAVHVVAGNGASTLLTDGWEIYSWG- 70
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWG--SFRDSHGS 153
+ G + + + +++S G +HS +L G VY WG SF +
Sbjct: 71 --------KTVGTNNQSVRKLQQLSNVLEVSHGSNHSATVLSSGEVYGWGEMSFLE---- 118
Query: 154 MGLKGEGIQKTPLKL--ESVSGIVK-IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL+ + K P KL + V K +A G H +L + G L++ G + GQLG Q
Sbjct: 119 -GLRRKRTIKQPRKLTFDKVQLNAKQVACGDRHVCILQNDGMLMSLGANDAGQLGIGRQS 177
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSK-GSILAFGLNNYSQLGEAD 268
++ + + L +V G + IS++ G++ ++G +LG
Sbjct: 178 KETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCVAISAQDGALFSWGWGTNGRLGHMS 237
Query: 269 SEVQKSGNTCFFTPHLIKSLSD-KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--- 324
E+ C+ P +++LS + FT +A G H+LA EG +Y FG + + ++
Sbjct: 238 EEM------CY-QPTYVEALSGVEPFTRVACGAAHTLAGTQEGDVYGFGWNGHSQVAGGE 290
Query: 325 ---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
LK P+ L+++ + ++CG S AI S G L+ WGM + Q G G E
Sbjct: 291 TDCLK----------PMLCLENQGVVRLSCGFAHSAAISSSGSLFTWGMNDDGQCGVGNE 340
Query: 382 DDI 384
+ +
Sbjct: 341 ETV 343
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVME--------RKTFALVEDLDNVV--EVVVGGMHTVCLT- 85
G++++ G D GQLG+G E R + L NV EV G H V ++
Sbjct: 158 GMLMSLGANDAGQLGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCVAISA 217
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL---PKKAVQISAGDSHSVALLEDGTVY 142
+DG +++WG G LG +E + + P V + +++ G +H++A ++G VY
Sbjct: 218 QDGALFSWGWGTNGRLGHMSE-EMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEGDVY 276
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
+G + H + K L LE+ G+V+++ G H ++S G+L T G + G
Sbjct: 277 GFGW--NGHSQVAGGETDCLKPMLCLEN-QGVVRLSCGFAHSAAISSSGSLFTWGMNDDG 333
Query: 203 QLG 205
Q G
Sbjct: 334 QCG 336
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 37 GVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNV---VEVVVGGMHTVCLTEDGKVYT 92
G + + G G G+LG + ++ + T+ VE L V V G HT+ T++G VY
Sbjct: 220 GALFSWGWGTNGRLGHMSEEMCYQPTY--VEALSGVEPFTRVACGAAHTLAGTQEGDVYG 277
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKK-AVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+G N + A G+++ + + L + V++S G +HS A+ G+++ WG D
Sbjct: 278 FGWNGHSQV---AGGETDCLKPMLCLENQGVVRLSCGFAHSAAISSSGSLFTWGMNDDGQ 334
Query: 152 GSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTS 189
+G + + T ++ E G ++ +A G H V + S
Sbjct: 335 CGVGNEETVPRPTRVEFEDRGGRYEGHVISVACGHSHTVCVLS 377
>gi|408501212|ref|YP_006865131.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466036|gb|AFU71565.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1186
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 188/451 (41%), Gaps = 66/451 (14%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA------VQISAGDSHSVA 134
++ + DG Y WG N G LG + + P V+ P A VQ+S G HS+A
Sbjct: 689 SLAVGSDGNAYAWGYNRYGQLG-DGTTTTRTTPVKVSKPVGAPTDFTYVQVSGGYYHSLA 747
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSG---------IVKIASGADHF 184
+ DG YAWG R G +G T P+++ S +++++G DH
Sbjct: 748 IGSDGYAYAWG--RSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQVSAGGDHS 805
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ + S GN G GQLG T + + + +P + P ++ +G YN
Sbjct: 806 LAVGSDGNAYAWGSNGSGQLGDGTYTTRTTPVK----VSKPADAPTNFTYVQ--VSGGYN 859
Query: 245 T--FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
I S G+ G N Y +LG+ S S + +D + +++G H
Sbjct: 860 DSLAIDSDGNAYGCGDNTYGKLGDGTS---TSRAMLVKVSKPADAPTDFIYMQISAGAGH 916
Query: 303 SLALNSEGKIYAFGRHDYGRLG--------LKNVSEPVTEPTPIPSLQDKTI--TSIACG 352
SLA+ S+G YA+GR D G+LG +V V +P+ P+ ++K + T ++ G
Sbjct: 917 SLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPS-SPTDENKGLKATQVSGG 975
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
S A+ S+G +Y WG+ N QLGN + ++ V +P
Sbjct: 976 GDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPVH--------------VRDPAN 1021
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK---- 468
LQ T + G S A+ S+G Y WG QLGN + L P+
Sbjct: 1022 SADTSKGLQ---ATQVKVGYDFSLAMGSDGNAYAWGANGNGQLGNDTTNTKLVPVPVVFN 1078
Query: 469 ----IEGKQLNNYTVLQVASGGQHSVILAKP 495
I G + + + + G SVI+ P
Sbjct: 1079 LQLVITGVKFDTDSGTNLTRGDGSSVIVTTP 1109
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 148/345 (42%), Gaps = 55/345 (15%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK---------KA 122
V+V G H++ + DG Y WG +D G LG +P V P KA
Sbjct: 736 VQVSGGYYHSLAIGSDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKA 795
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG------IVK 176
+Q+SAG HS+A+ DG YAWGS + G +G + TP+K+ + V+
Sbjct: 796 IQVSAGGDHSLAVGSDGNAYAWGS--NGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYVQ 853
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGM--SFLEPGEVPLKRKH 234
++ G + + + S GN G G+LG T S R M +P + P +
Sbjct: 854 VSGGYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTS------RAMLVKVSKPADAPTDFIY 907
Query: 235 IDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL--------IK 286
+ ++ + S G A+G ++ QLG NT F H
Sbjct: 908 MQISAGAGHSLAVGSDGYAYAWGRSDSGQLGN---------NTSGFGAHSSVPVRVRDPS 958
Query: 287 SLSDK----KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI---- 338
S +D+ K T ++ G HSLA+ S+G +YA+G ++YG+LG S P P+
Sbjct: 959 SPTDENKGLKATQVSGGGDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPVHVRD 1018
Query: 339 PSLQDKT-----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
P+ T T + G S A+ S+G Y WG QLGN
Sbjct: 1019 PANSADTSKGLQATQVKVGYDFSLAMGSDGNAYAWGANGNGQLGN 1063
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 154/356 (43%), Gaps = 80/356 (22%)
Query: 198 CPEQG-QLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
P++G QLG T + +ARRG+ F ++ + + D + ++ + S G+ A
Sbjct: 646 SPDKGSQLGNEATTITPPDSARRGIRF---SQISGSKYNGDPTYG--FSLAVGSDGNAYA 700
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N Y QLG+ + + + + + +D + ++ G +HSLA+ S+G YA+
Sbjct: 701 WGYNRYGQLGDGTTTTRTT---PVKVSKPVGAPTDFTYVQVSGGYYHSLAIGSDGYAYAW 757
Query: 316 GRHDYGRLGLKNVSEPVTEPTPI-----PSLQDKTITSI--ACGNCVSFAIDSEGVLYGW 368
GR D G+LG + T P + P+ ++K + +I + G S A+ S+G Y W
Sbjct: 758 GRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQVSAGGDHSLAVGSDGNAYAW 817
Query: 369 GMGNGYQLGNG------------KEDD------------------ILNSEGKIYAFGRHD 398
G QLG+G K D ++S+G Y G +
Sbjct: 818 GSNGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYVQVSGGYNDSLAIDSDGNAYGCGDNT 877
Query: 399 YGRLG---------LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
YG+LG L VS+P PT +Q I+ G S A+ S+G Y WG
Sbjct: 878 YGKLGDGTSTSRAMLVKVSKPADAPTDFIYMQ------ISAGAGHSLAVGSDGYAYAWGR 931
Query: 450 GNGYQLGN-----GKEDDILEPMKI--------EGKQLNNYTVLQVASGGQHSVIL 492
+ QLGN G + P+++ E K L QV+ GG HS+ +
Sbjct: 932 SDSGQLGNNTSGFGAHSSV--PVRVRDPSSPTDENKGLK---ATQVSGGGDHSLAV 982
>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC4-like [Glycine max]
Length = 404
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 191/472 (40%), Gaps = 107/472 (22%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVV-GGMHTVCLTEDGKVYT 92
+G V G GD G+LGLG + K D ++ + GG HT+ LT++G VY
Sbjct: 17 SGKRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCVYA 76
Query: 93 WGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G ND G LG P V KK VQ+SAG +HS A+ DG +Y WG
Sbjct: 77 TGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQ 136
Query: 152 GSMGLKGEGIQKTPLKLESVSGI-VKIAS-GADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+G + I P K+E ++GI +K+A+ G+DH + ++ G + G G+LG
Sbjct: 137 LGLGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGH--- 193
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ SIL F +YS+
Sbjct: 194 --------------------------------------GHESSILGF-FKSYSE------ 208
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+TP LIK L K +ASG +S + G ++ FG RL LK +S
Sbjct: 209 ----------YTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRLKAMS 258
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
+ T+P+ I L + + CG + + + G LY W LG G D I
Sbjct: 259 D-ATKPSLIGELPS---SKVVCGGYHTCVLTNSGELYTWXSNENGCLGIGSSDVI----- 309
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 449
++ E + P +++ ++CG + AI SEG ++ WG
Sbjct: 310 ----------------HLPEKIXGP-----FLKSSVSQLSCGWKNTAAI-SEGRVFTWGW 347
Query: 450 G--NGY----------QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G NG QLG+G + D + P ++ + + LQV+ G H+
Sbjct: 348 GGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGE--DVKALQVSCGFNHT 397
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 48/292 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + F++ G + A GLN++ QLG ++S+ C F +KK +++G
Sbjct: 62 GAHTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFG-------EEKKVVQVSAGY 114
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+HS A+ +G++Y +G++ +LGL K V PT + L I A G+ S AI
Sbjct: 115 NHSCAITVDGELYMWGKNTSVQLGLGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAI 174
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDIL---------------------------------- 385
G + WG+G +LG+G E IL
Sbjct: 175 SDGGEAFSWGVGVSGRLGHGHESSILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSAC 234
Query: 386 -NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
+ G ++ FG RL LK +S+ T+P+ I L + + CG + + + G L
Sbjct: 235 TDENGSVFVFGERAIERLRLKAMSD-ATKPSLIGELPS---SKVVCGGYHTCVLTNSGEL 290
Query: 445 YGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
Y W LG G D I P KI G L + +V Q++ G +++ +++ +
Sbjct: 291 YTWXSNENGCLGIGSSDVIHLPEKIXGPFLKS-SVSQLSCGWKNTAAISEGR 341
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query: 302 HSLALNSEGKIYA--FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
H L+L + GK + +G D+GRLGL N+ + +P P+ +D+T+ +IACG
Sbjct: 10 HHLSLRASGKRFVALWGNGDFGRLGLGNL-DSQWKPVVCPAFRDRTLKAIACG------- 61
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 419
G L G +YA G +D+G+LG+ EP +
Sbjct: 62 -------------------GAHTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFG 102
Query: 420 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTV 479
++K + ++ G S AI +G LY WG QLG GK + P+ + + LN +
Sbjct: 103 -EEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQLGLGKRAPNIVPLPTKVEYLNGINI 161
Query: 480 LQVASGGQHSVILA 493
A G HS+ ++
Sbjct: 162 KMAALGSDHSLAIS 175
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 161/356 (45%), Gaps = 22/356 (6%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTW 93
G ++ T G GQLG G + + F VE L +V V G T ++ DG VYTW
Sbjct: 57 GTLLTTFGLNLIGQLGQGHERPADRPFP-VEALSGKRIVYVAAGDSCTAAISLDGDVYTW 115
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
G + G LG + + E +P+ V K V++S G +H A+ +DG +Y WG S
Sbjct: 116 GSGEYGKLGHNDDSN-ENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAA-SA 173
Query: 152 GSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GS G + I + ++ ++ G H +T +G + T G +G+LG + S
Sbjct: 174 GSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNS 233
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEV 271
+P +V + + DV G T + + + G ++Y QLG S
Sbjct: 234 Q----------YQPKKVQSLTEKVVDVACGRDFTIFVCESGLYSCGADDYGQLGLGRSH- 282
Query: 272 QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP 331
G TP + +++G +H AL +G +Y +G G+LG ++
Sbjct: 283 ---GERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKAD- 338
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNS 387
+ P+ +L++ I +ACG + A+ +GVLY WG G QLG G E + + S
Sbjct: 339 CSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIAS 394
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 187/419 (44%), Gaps = 63/419 (15%)
Query: 92 TWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
T+G N G LG+ E D F + ++ K+ V ++AGDS + A+ DG VY WGS
Sbjct: 62 TFGLNLIGQLGQGHERPADRPFPVEALS-GKRIVYVAAGDSCTAAISLDGDVYTWGS--G 118
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+G +G + + P +E++ G IVK++ G +H + G+L G
Sbjct: 119 EYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWG---------- 168
Query: 208 TQRSASRNARRGMSFLEPGEVP--LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
R+AS + P + L+++ + V G +T ++ KG + +G +L
Sbjct: 169 --RAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGEL 226
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + Q + P ++SL++K +A G+ ++ + G +Y+ G DYG+LG
Sbjct: 227 GHGEKNSQ-------YQPKKVQSLTEK-VVDVACGRDFTIFVCESG-LYSCGADDYGQLG 277
Query: 325 L--KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
L + V P + + +I+ G+ A+ +G++Y WG+G QLG+G++
Sbjct: 278 LGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKA 337
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
D + P+ +L++ I +ACG + A+ +G
Sbjct: 338 D---------------------------CSLAKPVDNLRNFEIVQVACGGGHTAAVTKDG 370
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY---TVLQVASGGQHSVILAKPKPN 498
VLY WG G QLG G E + + + Q+ + VL V G HS +L + N
Sbjct: 371 VLYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLCQDMKN 429
>gi|255074853|ref|XP_002501101.1| predicted protein [Micromonas sp. RCC299]
gi|226516364|gb|ACO62359.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 402
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 175/379 (46%), Gaps = 55/379 (14%)
Query: 37 GVVLTCGQGDTGQLGLG--------PDVMERKTFALVEDLDNVVEVVVGG---MHTVCLT 85
G VL CG D Q+G G P+++E A ++ + + V GG H + +
Sbjct: 8 GEVLFCGMTDWKQVGRGKTDDEDTFPNILEPTRIATLKGVS--IAKVCGGSAATHCMAIA 65
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYA 143
DG+V+TWG N+ G LG + D+ P V K V S G SH+V + DG YA
Sbjct: 66 ADGRVFTWGRNETGQLGL-GDVDNRAAPTEVKALAGIKVVDGSCGKSHTVVVTADGNAYA 124
Query: 144 WGSFRDSHGSMGL--------KGEGIQKTPLKLESVSGIVKIASGADHFVMLT-SRGNLL 194
WGS + HG +G+ K + + P++ SVS V +A GA+ + + G LL
Sbjct: 125 WGS--NKHGQLGVGSIARTKPKEDDNRLVPVQC-SVSACVAVACGAEFSMWICGDDGKLL 181
Query: 195 TAGCPEQGQLGRIT--QRSASRNARRGMSFLEPGEVP---LKRKHIDDVFTGVYNTF-IS 248
+AG P+ GQLG T + + + ++ + +P +P L + I V +G +T +
Sbjct: 182 SAGLPQYGQLGHGTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHTIAVD 241
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDKKF----TMLASGQHHS 303
+G +G Y +LG +VQK +TP +++ D+ ++A+GQ S
Sbjct: 242 DQGKFHTWGFGGYGRLGH---KVQKD----EWTPKMVEIQGGDRNLCPPDCVVAAGQTTS 294
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
G++Y FGR LK + P P LQ + S+ACG ++A E
Sbjct: 295 WVTALMGQMYCFGR-------LKTTGDNTMYPVPFLDLQGWRLRSVACGA-TTYAACGED 346
Query: 364 VLYGWGMGNGY-QLGNGKE 381
WG G G +LG G E
Sbjct: 347 QAITWGQGAGCGELGYGPE 365
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 49/267 (18%)
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNS 308
G +L G+ ++ Q+G ++ + + P I +L + G H +A+ +
Sbjct: 8 GEVLFCGMTDWKQVGRGKTDDEDTFPN-ILEPTRIATLKGVSIAKVCGGSAATHCMAIAA 66
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G+++ +GR++ G+LGL +V PT + +L + +CG + + ++G Y W
Sbjct: 67 DGRVFTWGRNETGQLGLGDVDNRAA-PTEVKALAGIKVVDGSCGKSHTVVVTADGNAYAW 125
Query: 369 GMGNGYQLGNG-------KEDD-------------------------ILNSEGKIYAFGR 396
G QLG G KEDD I +GK+ + G
Sbjct: 126 GSNKHGQLGVGSIARTKPKEDDNRLVPVQCSVSACVAVACGAEFSMWICGDDGKLLSAGL 185
Query: 397 HDYGRLG-------------LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
YG+LG +K E +P PI +L + IT +A G+ + A+D +G
Sbjct: 186 PQYGQLGHGTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHTIAVDDQGK 245
Query: 444 LYGWGMGNGYQLGNGKEDDILEPMKIE 470
+ WG G +LG+ + D P +E
Sbjct: 246 FHTWGFGGYGRLGHKVQKDEWTPKMVE 272
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 153/397 (38%), Gaps = 100/397 (25%)
Query: 165 PLKLESVSG--IVKIASG--ADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR 218
P ++ ++ G I K+ G A H + + + G + T G E GQLG + R+A +
Sbjct: 38 PTRIATLKGVSIAKVCGGSAATHCMAIAADGRVFTWGRNETGQLGLGDVDNRAAPTEVKA 97
Query: 219 GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG----------EAD 268
K +D + +++ G+ A+G N + QLG E D
Sbjct: 98 LAGI----------KVVDGSCGKSHTVVVTADGNAYAWGSNKHGQLGVGSIARTKPKEDD 147
Query: 269 SE---VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG- 324
+ VQ S + C + +F+M G +GK+ + G YG+LG
Sbjct: 148 NRLVPVQCSVSAC------VAVACGAEFSMWICG--------DDGKLLSAGLPQYGQLGH 193
Query: 325 ------------LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+K E +P PI +L + IT +A G+ + A+D +G + WG G
Sbjct: 194 GTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHTIAVDDQGKFHTWGFGG 253
Query: 373 GYQLGNGKEDDILNSE-------------------------------GKIYAFGRHDYGR 401
+LG+ + D + G++Y FGR
Sbjct: 254 YGRLGHKVQKDEWTPKMVEIQGGDRNLCPPDCVVAAGQTTSWVTALMGQMYCFGR----- 308
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKE 460
LK + P P LQ + S+ACG ++A E WG G G +LG G E
Sbjct: 309 --LKTTGDNTMYPVPFLDLQGWRLRSVACGA-TTYAACGEDQAITWGQGAGCGELGYGPE 365
Query: 461 --DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
P +E L V+QVA G H++ L KP
Sbjct: 366 GPKSSANPKLVE--SLGGKHVIQVACGVGHTLFLIKP 400
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 185/377 (49%), Gaps = 36/377 (9%)
Query: 15 NPSQKVFVTSEAVPTLKCKTGGGVVLTC-GQGDTGQLGLGPDVMERKTFALVEDLD---- 69
N ++K + SE V ++ + C G G+LGLG +E + + +LD
Sbjct: 3 NWNKKRRLASEPVIAVEYPLHKKKDMFCWGSTIHGELGLGG--IEDENILIPRELDFKKA 60
Query: 70 -NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA-EGDSEFIP-QTVNLPKKAVQIS 126
+ ++ G +TV +T+ G++Y+ G ND G LG E + IP + KKA +
Sbjct: 61 AEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKA---A 117
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG-IQKTPLKLESV--SGIVKIASGADH 183
G H++A+ E G +++WGS ++ G +GL + ++ +P ++++ S +V+IA G H
Sbjct: 118 CGAYHTLAINEWGQLFSWGS--NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKH 175
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVY 243
LT+ G L + G +GQLG T + +F+ +P I + G Y
Sbjct: 176 AFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFI---GIP-----IAFIACGGY 227
Query: 244 NTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ IS G++ +G N + QLG D++ + P +++L + K A G+
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQLGLNDTQDRN-------LPCQLQTLQNAKICYAACGEEF 280
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDS 361
S+ L +G ++ G YG+LG + S + P + L T+T I+CG + A + S
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339
Query: 362 EGVLYGWGMGNGYQLGN 378
G +Y WG+G QLGN
Sbjct: 340 RGRVYAWGLGGAGQLGN 356
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 165/398 (41%), Gaps = 70/398 (17%)
Query: 141 VYAWGSFRDSHGSMGLKG---EGIQ-KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
++ WGS HG +GL G E I L + + I +IA G ++ V++T G + +
Sbjct: 28 MFCWGS--TIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSC 85
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
G + GQLG R+ + + PG L G Y+T I+ G + +
Sbjct: 86 GNNDYGQLGH-------EKGRKRLQLI-PG---LDAFVFKKAACGAYHTLAINEWGQLFS 134
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G N QLG +S +P ++K+L +A G H+ AL + G++Y++
Sbjct: 135 WGSNTEGQLGLNSKNFMES------SPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSW 188
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G + G+LGL + +P I + I IACG S AI G ++GWG Q
Sbjct: 189 GSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQ 248
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG D L +G ++ G YG+LG + S
Sbjct: 249 LGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSN 308
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L T+T I+CG + A + S G +Y WG+G QLGN + P
Sbjct: 309 EIL-PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQV 367
Query: 469 IEG--------------KQLNN----YTVLQVASGGQH 488
+ G KQ N+ Y V + +GG H
Sbjct: 368 VHGPWIAPNGSTIMDVNKQFNSRTIGYIVKHIFTGGDH 405
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 149/337 (44%), Gaps = 40/337 (11%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLT-------CGQGDTGQLGLGPDVMERKTFALVEDL 68
P + F + + + C VV+T CG D GQLG RK L+ L
Sbjct: 52 PRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKG---RKRLQLIPGL 108
Query: 69 DNVV--EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ 124
D V + G HT+ + E G++++WG N EG LG ++ E P+ V VQ
Sbjct: 109 DAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQ 168
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIAS 179
I+ G H+ AL +G +Y+WGS +S G +GL G I K +K + +S I IA
Sbjct: 169 IACGMKHAFALTNNGELYSWGS--NSEGQLGL-GTDI-KYEIKPKFISAFIGIPIAFIAC 224
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G H + ++ G + G GQLG + RN + L+ ++ +
Sbjct: 225 GGYHSIAISKSGAVFGWGKNTFGQLG--LNDTQDRNLPCQLQTLQNAKICYAACGEE--- 279
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
++ F++ G + G Y QLG N+ P + L T ++ G
Sbjct: 280 ---FSVFLTVDGGVFTCGAGMYGQLGHG-------SNSNEILPRQVMELMGSTVTQISCG 329
Query: 300 QHHSLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
+ H+LAL S G++YA+G G+LG + + VT P
Sbjct: 330 KRHTLALVPSRGRVYAWGLGGAGQLG-NHSTRSVTTP 365
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 34 TGGGVVLTCGQGDTGQLGLGP---DVMERKTFALVEDLDNVVEVVVGGMHTVCLT-EDGK 89
T G V TCG G GQLG G +++ R+ L+ V ++ G HT+ L G+
Sbjct: 285 TVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMG--STVTQISCGKRHTLALVPSRGR 342
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA 122
VY WG G LG + S PQ V+ P A
Sbjct: 343 VYAWGLGGAGQLGNHST-RSVTTPQVVHGPWIA 374
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 176/401 (43%), Gaps = 58/401 (14%)
Query: 123 VQISAGDSHSVALLEDGT--VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA 178
+++ G + LL+D + +Y WG G +G K + + P +ES+ G + IA
Sbjct: 144 LEVQLGTIKTKVLLKDNSCDLYLWGG--GDRGRLGHKDDKPRFLPNVVESLLGQNVTMIA 201
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G H + L S+G + + G QG LG R R + G PL+ ++ V
Sbjct: 202 CGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRD------RYSPLMIDG--PLR--DVNVV 251
Query: 239 FTGVY---NTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
Y + IS G++ +G LG D V K P L+ +L +
Sbjct: 252 HVACYENHSAVISEDGNLYTWGKAG-PFLGYMDDSVTKQTK-----PRLVDALYGTRIVQ 305
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+A G+ H+L ++ EG++Y+FG + +G LG + + +T+PT +P+L +I ++CG
Sbjct: 306 VACGRSHTLVIDEEGRVYSFGINKFGELG-QGHDKAITKPTMVPNLV--SICKVSCGRHH 362
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------------LNSEG 389
S AID +GVL+ WG G QLG G+ + + + G
Sbjct: 363 SAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANG 422
Query: 390 KIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
Y +G + + G+ +V ++ P I T I CG + + S G L+ WG
Sbjct: 423 VAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWG 482
Query: 449 MGNGYQLGNGKEDDIL-EPMKIEGKQLNNYTVLQVASGGQH 488
QLGNG+ +PM +E L+ V VA G H
Sbjct: 483 CNMSGQLGNGEAKKTFSQPMPVE--SLSEKRVKMVACGEDH 521
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 175/415 (42%), Gaps = 62/415 (14%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGA 100
G GD G+LG D R +VE L NV + GG HT+ L G+V++WG +G
Sbjct: 168 GGGDRGRLGHKDD-KPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGC 226
Query: 101 LGREAEGDSEFIPQTVNLPKK---AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLK 157
LG D + P ++ P + V ++ ++HS + EDG +Y WG G M
Sbjct: 227 LGHGNLRD-RYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMD-D 284
Query: 158 GEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
Q P ++++ G IV++A G H +++ G + + G + G+LG+ ++ ++
Sbjct: 285 SVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITK- 343
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKS 274
P VP I V G +++ I G + +G QLG+ + +
Sbjct: 344 ---------PTMVP-NLVSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKS--- 390
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVT 333
F+P + +D+ ++ G H+ A+ + G Y +G + + G+ +V ++
Sbjct: 391 ----LFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELS 446
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
P I T I CG + + S G L+ WG QLGNG+
Sbjct: 447 SPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGE------------- 493
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
+ ++P P+ SL +K + +ACG D G L G G
Sbjct: 494 -------------AKKTFSQPMPVESLSEKRVKMVACGE------DHIGCLVGHG 529
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 32/240 (13%)
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
F P++++SL + TM+A G H++ALNS+G+++++G G LG N+ + +
Sbjct: 184 FLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDG 243
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN---GY---------------------- 374
L+D + +AC S I +G LY WG GY
Sbjct: 244 PLRDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRI 303
Query: 375 -QLGNGKEDD-ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 432
Q+ G+ +++ EG++Y+FG + +G LG + + +T+PT +P+L +I ++CG
Sbjct: 304 VQVACGRSHTLVIDEEGRVYSFGINKFGELG-QGHDKAITKPTMVPNLV--SICKVSCGR 360
Query: 433 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S AID +GVL+ WG G QLG G+ + P + G N+ + V+ G H+ +
Sbjct: 361 HHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNG--FNDQPLEDVSCGYGHTAAI 418
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 375 QLGNGKEDDIL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 433
QLG K +L ++ +Y +G D GRLG K+ +P P + SL + +T IACG
Sbjct: 147 QLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHKD-DKPRFLPNVVESLLGQNVTMIACGGS 205
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ A++S+G ++ WG G LG+G D P+ I+G L + V+ VA HS +++
Sbjct: 206 HTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGP-LRDVNVVHVACYENHSAVIS 264
Query: 494 K 494
+
Sbjct: 265 E 265
>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
Length = 338
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 33/335 (9%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
+ G QLG G +R + V++LD+V+ + GG + + DG + WG N
Sbjct: 1 MWAWGANSNAQLGDGTKT-DRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLF 59
Query: 99 GALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG 158
G LG D P V V + AG SHS+A+ DG+V+AWG +++G +G
Sbjct: 60 GQLGDGTTYD-RLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWG--WNTYGQLGDGT 116
Query: 159 EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR 218
+ TP+++E + +V +A+G+ H + + + G++ G GQLG T ++
Sbjct: 117 TDSRSTPVQVEGLDSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTEST----- 171
Query: 219 GMSFLEPGEVPLKRKHIDDVFT-GVYNTFIS---SKGSILAFGLNNYSQLGEADSEVQKS 274
VP++ + V + NTF S S G++ A+G N+ QLG SE S
Sbjct: 172 ---------VPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLG---SETAAS 219
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
+P ++ ++SG +SLAL ++G ++A+G + G+LG + +
Sbjct: 220 N-----SPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTT---SS 271
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
P+ + ++ S+A G A+ S G ++ WG
Sbjct: 272 SAPVQVTRLGSVVSVAAGPLHGLAVQSGGTVWDWG 306
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 126/287 (43%), Gaps = 22/287 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G GQLG G +R T V+ L +VV + G H++ + DG V+ WG N
Sbjct: 49 GTAWAWGSNLFGQLGDGT-TYDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWN 107
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + DS P V V ++AG HS+A+ DG+V+AWG+ + G +G
Sbjct: 108 TYGQLG-DGTTDSRSTPVQVEGLDSVVAVAAGSGHSLAVKADGSVWAWGA--NWSGQLGD 164
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P+++ + +V +++G L S G + G + GQLG T S S
Sbjct: 165 GTYTESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSP-- 222
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P +V Y+ + + G++ A+G N+ QLG +
Sbjct: 223 -------SPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTT------- 268
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
T P + L +A+G H LA+ S G ++ +G + YG+L
Sbjct: 269 TSSSAPVQVTRLG--SVVSVAAGPLHGLAVQSGGTVWDWGNNTYGQL 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 145/309 (46%), Gaps = 46/309 (14%)
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEA 267
A+ NA+ G P+ K++D V G + + S G+ A+G N + QLG+
Sbjct: 6 ANSNAQLGDGTKTDRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDG 65
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ + TP ++ L L +G HSLA+ ++G ++A+G + YG+LG
Sbjct: 66 TTYDR-------LTPVQVQGL--HSVVALEAGSSHSLAVKADGSVWAWGWNTYGQLG-DG 115
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---- 383
++ + P + L ++ ++A G+ S A+ ++G ++ WG QLG+G +
Sbjct: 116 TTDSRSTPVQVEGL--DSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVP 173
Query: 384 --------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
L S+G ++A+G +D G+LG + + P+P+
Sbjct: 174 VQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAAS--NSPSPVQVTGMA 231
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+ +I+ G+ S A+ ++G ++ WG + QLGNG P+++ +L +V+ VA
Sbjct: 232 SAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPVQV--TRLG--SVVSVA 287
Query: 484 SGGQHSVIL 492
+G H + +
Sbjct: 288 AGPLHGLAV 296
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 52/333 (15%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
++AWG+ ++ G K + + +P+ ++++ ++ I++G + S G G
Sbjct: 1 MWAWGANSNAQLGDGTKTD--RYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNL 58
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
GQLG T L P +V + ++ + + GS+ A+G N
Sbjct: 59 FGQLGDGTT----------YDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWNT 108
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y QLG+ ++ + TP ++ L +A+G HSLA+ ++G ++A+G +
Sbjct: 109 YGQLGDGTTDSRS-------TPVQVEGL--DSVVAVAAGSGHSLAVKADGSVWAWGANWS 159
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
G+LG +E T P + L ++ S++ GN S A+ S+G ++ WG + QLG+
Sbjct: 160 GQLGDGTYTES-TVPVQVTGL--GSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSET 216
Query: 381 EDD-------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 415
L ++G ++A+G + G+LG + +
Sbjct: 217 AASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTT---SSSA 273
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
P+ + ++ S+A G A+ S G ++ WG
Sbjct: 274 PVQVTRLGSVVSVAAGPLHGLAVQSGGTVWDWG 306
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 312 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 371
++A+G + +LG ++ +PIP ++ I+ G SFA+ S+G + WG
Sbjct: 1 MWAWGANSNAQLGDGTKTD---RYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSN 57
Query: 372 NGYQLGNGKEDDILN------------------------SEGKIYAFGRHDYGRLGLKNV 407
QLG+G D L ++G ++A+G + YG+LG
Sbjct: 58 LFGQLGDGTTYDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWNTYGQLG-DGT 116
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
++ + P + L ++ ++A G+ S A+ ++G ++ WG QLG+G + P+
Sbjct: 117 TDSRSTPVQVEGL--DSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPV 174
Query: 468 KIEG 471
++ G
Sbjct: 175 QVTG 178
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
++A+G + +LG ++ +PIP ++ I+ G SFA+ S+G + WG
Sbjct: 1 MWAWGANSNAQLGDGTKTD---RYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSN 57
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G D L P++++G ++V+ + +G HS+ +
Sbjct: 58 LFGQLGDGTTYDRLTPVQVQGL----HSVVALEAGSSHSLAV 95
>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
echinatior]
Length = 771
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 167/365 (45%), Gaps = 36/365 (9%)
Query: 13 AENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKTFAL 64
A+N + F+ + V ++C G + G D GQLGLG + + + +
Sbjct: 70 ADNIASHFFIRKDPVVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHISKPSCVK 129
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAE--GDSEFIPQTVN----L 118
+ + V V G HT+ T K++ G N EG LGRE GDS P +
Sbjct: 130 ILKPERVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILIYDCGLA 189
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGIVKI 177
+ +Q++AG HS+AL DG V AWGS + G +GL + G+ P+K+ + +I
Sbjct: 190 GPRIIQLAAGSHHSMALTSDGGVVAWGS--NLEGQLGLPEISGLVYKPMKVPIPEPVKEI 247
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
++G H V LT G + G E G+LG + +++ A + M P
Sbjct: 248 SAGYYHSVFLTESGLIYICGESESGKLG-LNINFSTQVAPKQMQLPAPAL---------H 297
Query: 238 VFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK--SLSDKKFT 294
V G ++TFI + G+I G N QLG + + TP L+ +L D+K
Sbjct: 298 VACGGHHTFILAENGNIYCSGSNASGQLGMGINVNETP------TPKLLPRGALQDEKII 351
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ G+ HS L GK++ G +G+LGL+ V E T Q+ ++++ACG C
Sbjct: 352 KIVCGESHSAILTESGKLFTCGDGRHGKLGLEENENNVHEVTFAVKYQELFVSNVACGGC 411
Query: 355 VSFAI 359
+ +
Sbjct: 412 HTILV 416
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 65/385 (16%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQ 124
D VV + G H+ + + G+++ +G ND G LG G I P V + P++
Sbjct: 82 DPVVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGL---GHRNHISKPSCVKILKPERVTH 138
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESV----SGIVKI 177
++ G +H++ ++A GS + G +G + I +P+ + I+++
Sbjct: 139 VACGRAHTLICTGAQKIFACGS--NQEGQLGRENSVIGDSSSSPILIYDCGLAGPRIIQL 196
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
A+G+ H + LTS G ++ G +GQLG + + S G+ + +P +VP+ + +
Sbjct: 197 AAGSHHSMALTSDGGVVAWGSNLEGQLG-LPEIS-------GLVY-KPMKVPIPEP-VKE 246
Query: 238 VFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM- 295
+ G Y++ F++ G I G + +LG N F T K + +
Sbjct: 247 ISAGYYHSVFLTESGLIYICGESESGKLG---------LNINFSTQVAPKQMQLPAPALH 297
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGL-KNVSE-PVTEPTPIPSLQDKTITSIACGN 353
+A G HH+ L G IY G + G+LG+ NV+E P + P +LQD+ I I CG
Sbjct: 298 VACGGHHTFILAENGNIYCSGSNASGQLGMGINVNETPTPKLLPRGALQDEKIIKIVCGE 357
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
S IL GK++ G +G+LGL+ V E
Sbjct: 358 SHSA--------------------------ILTESGKLFTCGDGRHGKLGLEENENNVHE 391
Query: 414 PTPIPSLQDKTITSIACGNCVSFAI 438
T Q+ ++++ACG C + +
Sbjct: 392 VTFAVKYQELFVSNVACGGCHTILV 416
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 152/353 (43%), Gaps = 50/353 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+V I G +H ++ G L G + GQLG + S+ + + LK +
Sbjct: 84 VVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHISKPSCVKI---------LKPE 134
Query: 234 HIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS--LSD 290
+ V G +T I + I A G N QLG +S + S ++ P LI L+
Sbjct: 135 RVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSS----PILIYDCGLAG 190
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP--TPIPSLQDKTITS 348
+ LA+G HHS+AL S+G + A+G + G+LGL +S V +P PIP + +
Sbjct: 191 PRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLVYKPMKVPIP----EPVKE 246
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLG-------------------------NGKEDD 383
I+ G S + G++Y G +LG G
Sbjct: 247 ISAGYYHSVFLTESGLIYICGESESGKLGLNINFSTQVAPKQMQLPAPALHVACGGHHTF 306
Query: 384 ILNSEGKIYAFGRHDYGRLGL-KNVSE-PVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
IL G IY G + G+LG+ NV+E P + P +LQD+ I I CG S +
Sbjct: 307 ILAENGNIYCSGSNASGQLGMGINVNETPTPKLLPRGALQDEKIIKIVCGESHSAILTES 366
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G L+ G G +LG + ++ + + K V VA GG H++++ +
Sbjct: 367 GKLFTCGDGRHGKLGLEENENNVHEVTFAVK-YQELFVSNVACGGCHTILVGR 418
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 147/316 (46%), Gaps = 41/316 (12%)
Query: 25 EAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEV 74
E V +C GG G V CG + GQLG G ALV DLD VV V
Sbjct: 64 EDVDVTQCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALV-DLDVEVVRV 122
Query: 75 VVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSH 131
G HT+C+ DG V+ +G N+ G LG + D F P +T+ L K V +++G H
Sbjct: 123 AAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDG-FQPRRIETLALEGKIVDVASGAEH 181
Query: 132 SVALLEDGTVYAWGSFRD---SHGSMGLKGEGIQKTP--------LKLESVSGIVKIASG 180
S+AL ED VY+WG+ D HGS +T L+ S + + IA+G
Sbjct: 182 SLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAG 241
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H + RG L T G QLG+ ++ A + + L + + V
Sbjct: 242 HMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTL---------RFVHQVTC 292
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G +T S+ ++++G N + +LG + KS P IK LS + ++ L++G
Sbjct: 293 GGLHTLASTSAGVVSWGANQHGELGHGSNSDAKSA-----IPKPIK-LSSRGWSKLSAGW 346
Query: 301 HHSLALNSEGKIYAFG 316
HS ++++GK++A+G
Sbjct: 347 KHSAGVSNDGKLFAWG 362
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 177/382 (46%), Gaps = 38/382 (9%)
Query: 38 VVLTCGQGDTGQLGLGP-----DVMERKTFAL-----VEDLDNVVEVVVGGMHTVCLTED 87
L+ G GD G+LG G DV R + +ED+D V + GG H++ L
Sbjct: 26 TALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVD-VTQCAAGGAHSIFLAHG 84
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQT--VNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
G V+ G N+ G LG S +P+ V+L + V+++AG++H++ + DG V+A+G
Sbjct: 85 GFVFACGLNNYGQLGHGKH--SAHVPEAALVDLDVEVVRVAAGNNHTLCVDVDGGVWAFG 142
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS---GIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
GL +G Q P ++E+++ IV +ASGA+H + L+ + + G G
Sbjct: 143 KNEGGQLGTGLDLDGFQ--PRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADG 200
Query: 203 QLGRITQR-SASRNARRGMSFLEPGEV-PLKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
LG ++ + R + +P + L + + G +++ + +G + +G
Sbjct: 201 VLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTWGQG 260
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT-MLASGQHHSLALNSEGKIYAFGRH 318
++QLG+ V P KS+ +F + G H+LA S G + ++G +
Sbjct: 261 RFNQLGQTSKYVDHE-----TAP---KSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGAN 311
Query: 319 DYGRLGLKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+G LG + S+ + P PI L + + ++ G S + ++G L+ WG G
Sbjct: 312 QHGELGHGSNSDAKSAIPKPIK-LSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGGSV--- 367
Query: 378 NGKEDDILNSEGKIYAFGRHDY 399
D+ L+S G++ DY
Sbjct: 368 GSHSDEKLSSGGQLGLGNDFDY 389
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 146/355 (41%), Gaps = 68/355 (19%)
Query: 165 PLK-LESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFL 223
P++ LE V + + A+G H + L G + G GQLG + +
Sbjct: 59 PVRGLEDVD-VTQCAAGGAHSIFLAHGGFVFACGLNNYGQLG---------HGKHSAHVP 108
Query: 224 EPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
E V L + + + + G + AFG N QLG + + G F P
Sbjct: 109 EAALVDLDVEVVRVAAGNNHTLCVDVDGGVWAFGKNEGGQLG---TGLDLDG----FQPR 161
Query: 284 LIKSLS-DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG----------LKNVSEPV 332
I++L+ + K +ASG HSLAL+ + ++Y++G G LG ++ V
Sbjct: 162 RIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTV 221
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+P + +L + + SIA G+ S +D G L+ WG G QLG
Sbjct: 222 AKPRLLRALSETKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSV 281
Query: 379 -----------GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTE-PTPIPSLQDKTIT 426
G + ++ + ++G + +G LG + S+ + P PI L + +
Sbjct: 282 DTLRFVHQVTCGGLHTLASTSAGVVSWGANQHGELGHGSNSDAKSAIPKPIK-LSSRGWS 340
Query: 427 SIACGNCVSFAIDSEGVLYGWGMG------------NGYQLGNGKEDDILEPMKI 469
++ G S + ++G L+ WG G +G QLG G + D EP ++
Sbjct: 341 KLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEV 395
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 49/274 (17%)
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
FG + Q+ D +S N +F P ++ L D T A+G HS+ L G ++A
Sbjct: 35 FGRLGHGQVLTDDDVSFRSSN--YFHP--VRGLEDVDVTQCAAGGAHSIFLAHGGFVFAC 90
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G ++YG+LG S V E + D + +A GN + +D +G ++ +G G Q
Sbjct: 91 GLNNYGQLGHGKHSAHVPEAALVD--LDVEVVRVAAGNNHTLCVDVDGGVWAFGKNEGGQ 148
Query: 376 LGNGKEDD---------------------------ILNSEGKIYAFGRHDYGRLG----- 403
LG G + D L+ + ++Y++G G LG
Sbjct: 149 LGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLGHGSET 208
Query: 404 -----LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
++ V +P + +L + + SIA G+ S +D G L+ WG G QLG
Sbjct: 209 WNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQT 268
Query: 459 KE--DDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ D P ++ + V QV GG H++
Sbjct: 269 SKYVDHETAPKSVDTLRF----VHQVTCGGLHTL 298
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 24/237 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDV--MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G+ + GQLG G D+ + + + +V+V G H++ L+ED +VY+WG
Sbjct: 136 GGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWG 195
Query: 95 CNDEGALGREAEGDSE----FIPQTVNLPK--------KAVQISAGDSHSVALLEDGTVY 142
+ +G LG +E +E +TV P+ K I+AG HS + E G ++
Sbjct: 196 TSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELF 255
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
WG R + K + P ++++ + ++ G H + TS G +++ G + G
Sbjct: 256 TWGQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGANQHG 314
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGL 258
+LG ++ +A+ + P + L + + G ++ +S+ G + A+G
Sbjct: 315 ELG----HGSNSDAKSAI----PKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGF 363
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTF-ALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
C G + T GQG QLG ++ +T V+ L V +V GG+HT+ T G V
Sbjct: 247 CVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-V 305
Query: 91 YTWGCNDEGALGREAEGDSE-FIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAW---- 144
+WG N G LG + D++ IP+ + L + ++SAG HS + DG ++AW
Sbjct: 306 VSWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGG 365
Query: 145 --GSFRD----SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRG 191
GS D S G +GL + P ++ V ++ G +H + L G
Sbjct: 366 SVGSHSDEKLSSGGQLGLGNDFDYWEPTEVWLPGDAVGVSCGFNHTLALVRLG 418
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 36/186 (19%)
Query: 316 GRHDYGRLGLKNV--SEPVTEPT-----PIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
G D+GRLG V + V+ + P+ L+D +T A G
Sbjct: 31 GNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAG---------------- 74
Query: 369 GMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 428
G L G ++A G ++YG+LG S V E + D + +
Sbjct: 75 ----------GAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVD--LDVEVVRV 122
Query: 429 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
A GN + +D +G ++ +G G QLG G + D +P +IE L ++ VASG +H
Sbjct: 123 AAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEG-KIVDVASGAEH 181
Query: 489 SVILAK 494
S+ L++
Sbjct: 182 SLALSE 187
>gi|30695429|ref|NP_199644.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26450138|dbj|BAC42188.1| regulator of chromosome condensation like [Arabidopsis thaliana]
gi|28973207|gb|AAO63928.1| putative regulator of chromosome condensation (cell cycle
regulatory protein) [Arabidopsis thaliana]
gi|332008269|gb|AED95652.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 455
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 205/472 (43%), Gaps = 83/472 (17%)
Query: 39 VLTCGQGDTGQLGLGPDV-----MERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYT 92
V++ G G+ G LGL M+ +V +L ++ + G H++ +T G+++
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWA 105
Query: 93 WGCNDEGALGR---EAEGDSEFIPQTVN-LPKKAVQIS-AGDSHSVALLEDGTVYAWGSF 147
WG NDEG LGR ++ DS P+ V L VQ + A S A+ +DG+++ WG
Sbjct: 106 WGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWG-- 163
Query: 148 RDSHGSMGLKGEGI--QKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
R G +GL G GI + P ++E+++ +VK++ G H + LT G + G G+
Sbjct: 164 RSKRGQLGL-GNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGR 222
Query: 204 LGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
+G + +PL+ +D + G S KG A LN +
Sbjct: 223 VGNVG-------------------LPLEASLLDSITDG------SMKGHHAAGDLNLEAA 257
Query: 264 LGEADSEVQKSGNTCF-FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ + K + + P L++ ++K +A G HSL L +G + + G + YG+
Sbjct: 258 EKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQ 317
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV--LYGWGMGNGYQLGNGK 380
LG ++ + +P I ++ SIA G S AI + G + WG QLG GK
Sbjct: 318 LG-RSKQDLGMKPVDIT----ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGK 372
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
+++ P + ++ S++ G S +
Sbjct: 373 PENL-----------------------------PREVEGFDGESPASVSAGRVHSLCVTE 403
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+G + WG G +LG G D EPM +E + VLQ +G HS+IL
Sbjct: 404 KGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVE---GCVLQAVAGFDHSLIL 452
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 74/325 (22%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWG 94
G + G+ GQLGLG ++E + + VE+L ++VV+V +G H + LT DGKV+ WG
Sbjct: 157 GSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWG 216
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G +G V LP +A +LL+ T GS + H +
Sbjct: 217 YVADGRVG------------NVGLPLEA-----------SLLDSITD---GSMKGHHAAG 250
Query: 155 GLKGEGIQK-----------TPLKLESV-------SGIVKIASGADHFVMLTSRGNLLTA 196
L E +K P+ E + IA G+DH ++L G LL+A
Sbjct: 251 DLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSA 310
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKG--SI 253
G GQLGR Q GM ++ E P+ + G+ ++ I ++G +I
Sbjct: 311 GSNIYGQLGRSKQ-------DLGMKPVDITESPIS------IAAGLGHSLAICNRGERNI 357
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
L++G N QLG E P ++ + +++G+ HSL + +G+ +
Sbjct: 358 LSWGWNRSRQLGRGKPE---------NLPREVEGFDGESPASVSAGRVHSLCVTEKGEAW 408
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPI 338
+G GRLGL + S+ EP P+
Sbjct: 409 VWGCGKNGRLGLGSSSD---EPEPM 430
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
C G +L+ G + QLG G P+ + R+ D ++ V G +H++C+TE G+
Sbjct: 350 CNRGERNILSWGWNRSRQLGRGKPENLPREVEGF--DGESPASVSAGRVHSLCVTEKGEA 407
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ WGC G LG + D ++ +Q AG HS+ L+ +
Sbjct: 408 WVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVAGFDHSLILVAE 455
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 58/362 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
I +A G + +T +G + ++G GQLG S G++ ++ + K
Sbjct: 75 IRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGL-----GSLKEVEGITLIDS----IPEK 125
Query: 234 HIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS--DK 291
I ++ F++ +G + + G +LG + TP L++SL+ ++
Sbjct: 126 VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRME------TPQLVESLAREEE 179
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS------EPV-------TEPTPI 338
K +A+G S+AL+ GK+Y+FG + G LG V EP T P I
Sbjct: 180 KIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLI 239
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------- 384
+L+ + + I+CG+ +FAI+ EGV +GWG G + E +
Sbjct: 240 RALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPGPWK 299
Query: 385 -----------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT---ITSIAC 430
L G+++A+G + +G LG+ EP + L + I IA
Sbjct: 300 QIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAA 359
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+DSEG +Y WG G+ LG G+E+D EP+ I+ +Q V ++ +G +++
Sbjct: 360 GWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYAI 419
Query: 491 IL 492
+
Sbjct: 420 AV 421
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 32/339 (9%)
Query: 64 LVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK 121
+V L N + +V G T+ +T+ G+VY+ G G LG + + E I ++P+K
Sbjct: 66 IVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLIDSIPEK 125
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS----GIVKI 177
+ +AGD HS+ + E G +Y+ G + +G ++ TP +ES++ I+K+
Sbjct: 126 VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRME-TPQLVESLAREEEKIIKV 184
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGR---------ITQRSASRNARRGMSFLEPGEV 228
A+G + L+ G + + G G LG + RN +
Sbjct: 185 AAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIR---- 240
Query: 229 PLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+++ ++ + G + F I+ +G +G Y D+EV F HL
Sbjct: 241 ALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFA-TDNEVNWEQPQALF--HL--- 294
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-- 345
+ + SG H+L L G+++A+G + +G LG+ EP + L +
Sbjct: 295 --PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKE 352
Query: 346 -ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
I IA G S A+DSEG +Y WG G+ LG G+E+D
Sbjct: 353 PIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEED 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 47/274 (17%)
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
L + E SG T + P ++ SL +K +A GQ +L + +G++Y+ G YG+
Sbjct: 45 HLPSEEYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQ 104
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--- 379
LGL ++ E V T I S+ +K IT A G+ S + +G LY G G +LG G
Sbjct: 105 LGLGSLKE-VEGITLIDSIPEKVIT-CAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTIS 162
Query: 380 --------------KEDDI------------LNSEGKIYAFGRHDYGRLGLKNVS----- 408
+E+ I L+ GK+Y+FG + G LG V
Sbjct: 163 RRMETPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFL 222
Query: 409 -EPV-------TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 460
EP T P I +L+ + + I+CG+ +FAI+ EGV +GWG G + E
Sbjct: 223 WEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNE 282
Query: 461 DDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ +P + L Q+ SGG H++ L K
Sbjct: 283 VNWEQPQAL--FHLPG-PWKQIVSGGAHTLGLTK 313
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL----DNVVEVVVGGMHTVCLTEDGKVYT 92
G + +CG G G+LGLG +T LVE L + +++V G ++ L+E GKVY+
Sbjct: 143 GHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYS 202
Query: 93 WGCNDEGALGR-------------EAEGDSEFIPQTVN-LPKKAVQ-ISAGDSHSVALLE 137
+G ++G LG + + E P+ + L K+ ++ IS G H+ A+ +
Sbjct: 203 FGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINK 262
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK-IASGADHFVMLTSRGNLLTA 196
+G + WG R + E + P L + G K I SG H + LT G +
Sbjct: 263 EGVAFGWGCGR--YHCFATDNEVNWEQPQALFHLPGPWKQIVSGGAHTLGLTKGGQVWAW 320
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
G G LG QR++ R L+ + P++ F+ + S+G + ++
Sbjct: 321 GVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFS----MAVDSEGYVYSW 376
Query: 257 GLNNYSQLGEADSE 270
G + LG + E
Sbjct: 377 GRGHAGALGTGEEE 390
>gi|339245265|ref|XP_003378558.1| acyl CoA binding protein [Trichinella spiralis]
gi|316972520|gb|EFV56197.1| acyl CoA binding protein [Trichinella spiralis]
Length = 539
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 123/256 (48%), Gaps = 53/256 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDE 98
+ CG GD GQLGLG DV E F +V + GCNDE
Sbjct: 168 LFVCGVGDMGQLGLGDDVRECHKFR-------------------------RVLSCGCNDE 202
Query: 99 GALGREA-EGDSE-----------FIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
GALGR E D E F + +N + ISAGDSH AL +G+V+ WG
Sbjct: 203 GALGRAVFENDEEVDEDCTFAKVQFDQEDLNEHGEIAMISAGDSHGAALTVNGSVFIWGR 262
Query: 147 FRDSHGSMGL-------KGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
FR +G++GL K KTP+ L S IVKI+SG +H + L G + T G
Sbjct: 263 FRGKNGALGLMVDQKTNKVISQSKTPVLLWSYKNHKIVKISSGCNHLMCLDESGKVWTIG 322
Query: 198 CPEQGQLGRITQ----RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
GQLGRI + + R RR +S L+ E+ K K++ V G + I+ ++
Sbjct: 323 DGSDGQLGRIFRFDFDLESIRVTRRLLS-LDCVELKHKCKNVFAVAQGSFA--ITVDDNV 379
Query: 254 LAFGLNNYSQLGEADS 269
+ +GLN Y+QLG+A S
Sbjct: 380 IVWGLNGYAQLGKAYS 395
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 32/170 (18%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG----LKNVSEPVTEPT 336
TP L+ S + K ++SG +H + L+ GK++ G G+LG E +
Sbjct: 287 TPVLLWSYKNHKIVKISSGCNHLMCLDESGKVWTIGDGSDGQLGRIFRFDFDLESIRVTR 346
Query: 337 PIPSL-------QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILNSE 388
+ SL + K + ++A G SFAI + + WG+ NGY QL
Sbjct: 347 RLLSLDCVELKHKCKNVFAVAQG---SFAITVDDNVIVWGL-NGYAQL------------ 390
Query: 389 GKIYAFGRHDYGRLGLKNVSE--PVTEPTPIPSLQDKTITSIACGNCVSF 436
GK Y++G + G LGL V E +T PT IP QD ++ I C +SF
Sbjct: 391 GKAYSWGANIGGMLGLP-VEEDLSITTPTEIPVPQDFSLIFI-CYLFISF 438
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 159/367 (43%), Gaps = 52/367 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V +CG + GQLG + + +E+ + ++ G H ++ G+++TWGCN
Sbjct: 61 GEVYSCGGNEFGQLGRSDSPSDFRRITALEN-HTITDIACGAYHNAAISYTGRLFTWGCN 119
Query: 97 DEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
G LGR EGD + +L + + VQ+S G HS+ L + ++ +GS +G
Sbjct: 120 SNGQLGR--EGDDSSVKMIRSLAEHRVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLGLG 177
Query: 156 LKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
+ + P +L ++G I I++G H +LT G L G + GQLG
Sbjct: 178 FRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLG-------- 229
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI---LAFGLNNYSQLGE---- 266
LEP E T T S+ SI + N Y QLG
Sbjct: 230 ---------LEPIE------------TVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIE 268
Query: 267 ---------ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
+ S ++ + P ++SL ++ + G+ H++ L EG ++ +G
Sbjct: 269 TVAAETVSGSRSSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGG 328
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQL 376
+ +G+LG S+ V+ P + L D T +ACG + + S G +Y +G G+ QL
Sbjct: 329 NQFGQLGHGESSKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPSLGCVYAFGAGSEGQL 388
Query: 377 GNGKEDD 383
G D
Sbjct: 389 GTNTNTD 395
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 177/460 (38%), Gaps = 66/460 (14%)
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFI----PQTVNLPKKAVQISAGDSHSVALLE 137
+C ++ WG D+ LG E DS+ I P TV P ++ G H++ L
Sbjct: 1 MCAAPKCILFGWGACDDNQLGPH-EQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNA 59
Query: 138 DGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAG 197
DG VY+ G + G +G + I IA GA H ++ G L T G
Sbjct: 60 DGEVYSCGG--NEFGQLGRSDSPSDFRRITALENHTITDIACGAYHNAAISYTGRLFTWG 117
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAF 256
C GQLGR S+ + R L + V G+ ++ + + S + F
Sbjct: 118 CNSNGQLGREGDDSSVKMIRS-----------LAEHRVVQVSLGLEHSLVLTDTSRLFVF 166
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G N + QLG + + P + L+ +++G HS L G +Y +G
Sbjct: 167 GSNIWGQLG-----LGFRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYVWG 221
Query: 317 RHDYGRLGLKNVSEPVTEPT------------------------PIPSLQDKTI--TSIA 350
+ YG+LGL+ + E PI ++ +T+ + +
Sbjct: 222 GNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAETVSGSRSS 281
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-ILNSEGKIYAFGRHDYGRLGLKNVSE 409
N ++ + + G+ +L EG ++ +G + +G+LG S+
Sbjct: 282 IENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLGHGESSK 341
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
V+ P + L D T +ACG + + S G +Y +G G+ QLG D P
Sbjct: 342 SVSIPRKVADLMDNPTTQVACGRMHTLVLVPSLGCVYAFGAGSEGQLGTNTNTDSSRPTL 401
Query: 469 IEGKQLNN--------------YTVLQVASGGQHSVILAK 494
++G L V ++ +GG H+ L +
Sbjct: 402 VKGPWLTRGFSSNQSTNSPDVPLEVARLYAGGDHAYALTR 441
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 180/409 (44%), Gaps = 56/409 (13%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFR 148
VY WG ND+ LG + + L K K + I+ G + ++G +YA G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG--E 3318
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLLTAGCPEQGQL 204
++G +GL + P + +S I K+A SG H + LT G + + G E G+L
Sbjct: 3319 GTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKL 3378
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQ 263
G S S + R + LK K I D+ G ++ I+S G + +GL Y +
Sbjct: 3379 GH--GNSVSLDKPRLIE-------SLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3429
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYG 321
LG D+ Q P L++SL ++ +A G ++AL ++G +Y++G D+G
Sbjct: 3430 LGHGDTATQ-------MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFG 3482
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+LG + S+ P I L + I CG S A+ G ++ WG G+ ++LG+G +
Sbjct: 3483 KLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3541
Query: 382 DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
V +PT + L+ K + +A G A+
Sbjct: 3542 HH---------------------------VRKPTLVEGLRGKKVVHVAVGALHCLAVTDT 3574
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P + +L++ V +V+ G HS+
Sbjct: 3575 GQVYAWGDNDHGQQGNGSTIVNKKPSLVH--ELDDARVNRVSCGSSHSI 3621
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 172/398 (43%), Gaps = 69/398 (17%)
Query: 139 GTVYAWGSFRDSHGSMG-LKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLT 195
G +Y WG + G +G L+G + K P+ ES+S + V++ G + +T+ G +
Sbjct: 4292 GAIYGWG--HNHRGQLGGLEGAKV-KLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4348
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT--------GVYNTFI 247
G G GR+ G+ + VP + I VF G + +
Sbjct: 4349 TG---YGAAGRL-----------GIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLAL 4394
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLAL 306
SS+G + ++G + +LG GN + P LI+ L + +A G HHS A+
Sbjct: 4395 SSEGHVYSWGEGDDGKLGH--------GNRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4446
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGV 364
S G +Y +G+ YGRLG + + +T P + +LQD + +ACG + + + +
Sbjct: 4447 TSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDYKVIDVACGSGDAQTLCVTDDDN 4505
Query: 365 LYGWGMGNGYQLGNGKEDDI--------------------------LNSEGKIYAFGRHD 398
++ WG G+ +LG G D L G IY +G+ D
Sbjct: 4506 VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGD 4565
Query: 399 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
Y RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4566 YHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4624
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ P + L + +VA G H++ + K
Sbjct: 4625 TTSALQRPRLVHA--LQGKKITRVACGSAHTLAWSTMK 4660
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 180/417 (43%), Gaps = 65/417 (15%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K L E L + V + GG T+ +T DGKVY
Sbjct: 4290 GSGAIYGWGHNHRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4348
Query: 93 WGCNDEGALGREAEG--DSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G GA GR G DS +P + ++ K V +++G H +AL +G VY+WG
Sbjct: 4349 TG---YGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4405
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
D G +G + P +E + G IV IA G H +TS G L T G +G+
Sbjct: 4406 GDD--GKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG---KGRY 4460
Query: 205 GRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---VYNTFISSKGSILAFGLNN 260
GR+ + L P V L+ + DV G ++ ++ ++G +
Sbjct: 4461 GRLGHGDSEDQ-------LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4513
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG S+ K P I+SL+ + G S+AL G IY +G+ DY
Sbjct: 4514 YGKLGRGGSDGCK-------IPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4566
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
RLG + V P + +LQ K I SIA G+ A +G ++ WG + QLG+G
Sbjct: 4567 HRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG- 4624
Query: 381 EDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K IT +ACG+ + A
Sbjct: 4625 --------------------------TTSALQRPRLVHALQGKKITRVACGSAHTLA 4655
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 113/243 (46%), Gaps = 34/243 (13%)
Query: 282 PHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
P + S+K TM+AS H LAL + +Y++G D GRLG + EP +
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW-YDEPKLVE 552
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL-------------- 385
+L DK IT IACG+ S + S G LY WG GN +LG+G D++L
Sbjct: 553 ALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVV 612
Query: 386 --------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+ G ++++G +YG+LG T P + L D + + CG
Sbjct: 613 HVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT-PKIVDKLLDINVAKVYCG 671
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
S A+ + G +Y WG G GY+LG+G E+ I P IE L V ++ G H +
Sbjct: 672 GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIE--VLXTKKVKELCVGNFHVLA 729
Query: 492 LAK 494
L +
Sbjct: 730 LTE 732
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 44/347 (12%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPD--VMERKTFA-LVEDLDNVVEVVVGGMHTVCLT 85
TL + G + CG+G G+LGLG D V E K L + + + V GG H + LT
Sbjct: 3303 TLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALT 3362
Query: 86 EDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
+DGK+++WG ++G LG D + +++ K+ I+ G HS A+ G +Y
Sbjct: 3363 QDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK-SKRIRDIACGSGHSAAITSSGELYT 3421
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGAD--HFVMLTSRGNLLTAGCP 199
WG +G +G Q P ++S+ G ++++A G+ + LT+ G++ + G
Sbjct: 3422 WG--LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3479
Query: 200 EQGQLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSI 253
+ G+LGR T R G+ +E G ++ ++ G +
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECG--------------AQFSLALTKYGEV 3525
Query: 254 LAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+G +Y +LG D V+K P L++ L KK +A G H LA+ G++
Sbjct: 3526 WTWGKGDYFRLGHGNDHHVRK--------PTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3577
Query: 313 YAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACGNCVSFA 358
YA+G +D+G+ G N S V +P+ + L D + ++CG+ S A
Sbjct: 3578 YAWGDNDHGQQG--NGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3622
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 163/353 (46%), Gaps = 56/353 (15%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHT 81
TL T G V G G G+LG+G P ++E V+ V V GG H
Sbjct: 4336 TLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKK----VAVNSGGKHC 4391
Query: 82 VCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLED 138
+ L+ +G VY+WG D+G LG R + I + L + V I+ G HS A+
Sbjct: 4392 LALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACGGHHSAAITSA 4449
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTSRGNLL 194
G +Y WG R +G +G Q TP +E++ ++ +A SG + +T N+
Sbjct: 4450 GWLYTWGKGR--YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4507
Query: 195 TAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--------YNTF 246
+ G + G+LG RG S + ++P+K + + + GV ++
Sbjct: 4508 SWGDGDYGKLG------------RGGS--DGCKIPMKIESLAGL--GVIKVECGSQFSVA 4551
Query: 247 ISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G+I +G +Y +LG D V++ P + +L KK +A+G H +A
Sbjct: 4552 LTRSGAIYTWGKGDYHRLGHGTDDHVRR--------PRKVAALQGKKIISIATGSLHCVA 4603
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G+++ +G +D G+LG + + P + +LQ K IT +ACG+ + A
Sbjct: 4604 CTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4655
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 55/310 (17%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
+ IAS +D H++ LT ++ + G + G+LG + + + EP V L
Sbjct: 505 VTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDR----------VWYDEPKLVEAL 554
Query: 231 KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K+I + G Y+ +SS G + +G NY +LG +S+ P L+ +L+
Sbjct: 555 VDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSD-------NVLIPTLVTALN 607
Query: 290 DKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
+A SG +L + + G ++++G +YG+LG T P + L D +
Sbjct: 608 GHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKT-PKIVDKLLDINVA 666
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------------------- 384
+ CG S A+ + G +Y WG G GY+LG+G E+ I
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFH 726
Query: 385 ---LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 441
L + +Y +GR+DYG++ + V EPT P+L K I +ACG SFA +
Sbjct: 727 VLALTEDQLVYGWGRNDYGQID-PALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS 785
Query: 442 GVLYGWGMGN 451
W + N
Sbjct: 786 ----AWSVAN 791
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + ++ S+ ++G + +LG D + P L+++L DK T +A G
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGD-------RVWYDEPKLVEALVDKNITFIACGS 566
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFA 358
+S L+S G++Y +GR +YGRLG N S+ V PT + +L + +ACG + +
Sbjct: 567 TYSAVLSSNGELYTWGRGNYGRLGHGN-SDNVLIPTLVTALNGHMVVHVACGSGDSQTLC 625
Query: 359 IDSEGVLYGWGMGNGYQLGNGKED------------DI--------------LNSEGKIY 392
+ + G+++ WG GN +LG G D DI L + G++Y
Sbjct: 626 VTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVY 685
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 452
+G+ + RLG N E + P I L K + + GN A+ + ++YGWG +
Sbjct: 686 TWGKGEGYRLGHGN-EEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDY 744
Query: 453 YQLGNGKEDDILEP 466
Q+ + EP
Sbjct: 745 GQIDPALGTVVPEP 758
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSV 133
G H + LT+D VY+WG D G LG GD + P+ V + K I+ G ++S
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLG---HGDRVWYDEPKLVEALVDKNITFIACGSTYSA 570
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFVMLTS 189
L +G +Y WG R ++G +G P + +++G +V +A SG + +T+
Sbjct: 571 VLSSNGELYTWG--RGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTA 628
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFIS 248
G + + G G+LGR S+ + L+ ++ V+ G ++ ++
Sbjct: 629 SGIVFSWGDGNYGKLGR-GGCDGSKTPKIVDKLLD--------INVAKVYCGGQFSAALT 679
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G + +G +LG + E + P +I+ L KK L G H LAL
Sbjct: 680 AYGEVYTWGKGEGYRLGHGNEEHIR-------YPKVIEVLXTKKVKELCVGNFHVLALTE 732
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+ +Y +GR+DYG++ + V EPT P+L K I +ACG SFA + W
Sbjct: 733 DQLVYGWGRNDYGQID-PALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS----AW 787
Query: 369 GMGN 372
+ N
Sbjct: 788 SVAN 791
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 303 SLALNSEGKIYAFGRHDYGRL-GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
+L+ + G IY +G + G+L GL+ V P SL + G A+ +
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGGLEGAK--VKLPVLCESLSALRPVQLTGGEQTLLAVTA 4342
Query: 362 EGVLYGWGMGNGYQLGNGKEDDI----------------------------LNSEGKIYA 393
+G +Y G G +LG G D + L+SEG +Y+
Sbjct: 4343 DGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4402
Query: 394 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+G D G+LG N P I L I IACG S AI S G LY WG G
Sbjct: 4403 WGEGDDGKLGHGN-RLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4461
Query: 454 QLGNGKEDDILEPMKIEGKQLNNYTVLQVASG 485
+LG+G +D L P +E L +Y V+ VA G
Sbjct: 4462 RLGHGDSEDQLTPKLVEA--LQDYKVIDVACG 4491
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+V + G G+ G+LG G KT +V+ L NV +V GG + LT G+
Sbjct: 625 CVTASGIVFSWGDGNYGKLGRG-GCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGE 683
Query: 90 VYTWGCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWG 145
VYTWG +G R G+ E I P+ + + KK ++ G+ H +AL ED VY WG
Sbjct: 684 VYTWG---KGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWG 740
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASG-ADHFVMLTS 189
R+ +G + + P ++SG I+ +A G F TS
Sbjct: 741 --RNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS 785
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 29/276 (10%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V + G GD G+LG G V + LVE L N+ + G ++ L+ +G++YTWG
Sbjct: 526 VYSWGNGDGGRLGHGDRVWYDEP-KLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRG 584
Query: 97 DEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
+ G LG D+ IP V V +GDS ++ + G V++WG ++G
Sbjct: 585 NYGRLG-HGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGD--GNYG 641
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G G KTP ++ + I K+ G LT+ G + T G E +LG +
Sbjct: 642 KLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEE 701
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADS 269
+ + + EV L K + ++ G ++ ++ + +G N+Y Q+ A
Sbjct: 702 H--------IRYPKVIEV-LXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA-- 750
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
T P L +LS K LA G S A
Sbjct: 751 -----LGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 356 SFAIDSEGVLYGWGMGNGYQLG------------------------NGKEDDIL--NSEG 389
+ + D G +YGWG + QLG G E +L ++G
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4344
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGW 447
K+YA G GRLG+ ++ V PT + S+Q + +A G A+ SEG +Y W
Sbjct: 4345 KVYATGYGAAGRLGIGG-TDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSW 4403
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G G+ +LG+G P IE +L ++ +A GG HS +
Sbjct: 4404 GEGDDGKLGHGNRLMYDRPKLIE--ELLGTEIVDIACGGHHSAAI 4446
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 178/405 (43%), Gaps = 80/405 (19%)
Query: 141 VYAWGSFRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WG+ SHG +GL G E TP ++ + S + +IA G H + LT+ G +
Sbjct: 3 LYCWGN--ASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYAC 60
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD-VFTGV-----YNTFISSK 250
G + QLG P + PL+ + D V T + ++ +S
Sbjct: 61 GSNDYSQLGHEL----------------PTKRPLQIPELQDYVITQIACGSRHSMALSEW 104
Query: 251 GSILAFGLNNYSQLGEA-DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + ++G N QLG A D ++ K P ++++L K +A G +HSLAL
Sbjct: 105 GQVFSWGDNECGQLGHASDQDIVK-------LPKIVRNLVSKTVVQIACGSNHSLALTCC 157
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
G++Y++G + YG+LG+ + ++ TP + +L +++IACG SF I ++G
Sbjct: 158 GELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFG 217
Query: 368 WGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGR 401
WG N QLG E + L EG ++ G YG+
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQ 277
Query: 402 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKE 460
LG S P + L TI+ +ACGN + A + S G +YG+G+G+ QLG
Sbjct: 278 LG-HGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNT 336
Query: 461 DDILEPMKIEGK----------QLNNYTVL----QVASGGQHSVI 491
+ P + G Q N+ + Q+ SGG S++
Sbjct: 337 KSLNLPQLVIGPWVSPSGSTLLQSNDAKIASVIHQIFSGGDQSIV 381
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 159/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PS+ + AV + C T G V CG D QLG ++ ++
Sbjct: 22 EQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLG--HELPTKRPLQ 79
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E D V+ ++ G H++ L+E G+V++WG N+ G LG ++ D +P+ V + K
Sbjct: 80 IPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSK 139
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG-EGIQK--TPLKLESVSGI--V 175
VQI+ G +HS+AL G +Y+WGS + +G +G+ +Q+ TP++L ++ GI
Sbjct: 140 TVVQIACGSNHSLALTCCGELYSWGS--NLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVS 197
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARR----GMSFLEPGEVP 229
IA G +H +++ + G GQLG T R+ + G+ F+ G+
Sbjct: 198 AIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGD-- 255
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++ +G + G Y QLG S + P ++ L
Sbjct: 256 ------------EFSVFLTIEGGVFTCGAGAYGQLGHGFSSNE-------MLPRMVMELM 296
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
+ +A G H+LAL S G+IY FG G+LG +N
Sbjct: 297 GSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRN 335
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 43/305 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P +P K ++ + G +T F+++ G + A G N+YSQLG +
Sbjct: 25 LTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKR-------- 76
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P I L D T +A G HS+AL+ G+++++G ++ G+LG + + V P + +
Sbjct: 77 -PLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRN 135
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------- 383
L KT+ IACG+ S A+ G LY WG QLG +D
Sbjct: 136 LVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIP 195
Query: 384 ------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
+++ ++ +GR++ G+LGL + + PT + +L+ + +ACG
Sbjct: 196 VSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY-PTQLKTLRTLGVRFVACG 254
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ S + EG ++ G G QLG+G + + P + +L T+ QVA G +H++
Sbjct: 255 DEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLA 312
Query: 492 LAKPK 496
L +
Sbjct: 313 LVPSR 317
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 162/377 (42%), Gaps = 54/377 (14%)
Query: 40 LTC-GQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
L C G GQLGLG ++ D V ++ G HT+ LT GKVY G
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPD-SAVNQIACGHRHTLFLTASGKVYACG 61
Query: 95 CNDEGALGREAEGDSEF-IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
ND LG E IP+ + QI+ G HS+AL E G V++WG + G
Sbjct: 62 SNDYSQLGHELPTKRPLQIPELQDY--VITQIACGSRHSMALSEWGQVFSWGD--NECGQ 117
Query: 154 MG-LKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G + I K P + ++ +V+IA G++H + LT G L + G GQLG ++
Sbjct: 118 LGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLG-VSSP 176
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS-ILAFGLNNYSQLGEADS 269
+ + + M +P + + G ++F+ SK S + +G NN QLG D
Sbjct: 177 NDLQQSNTPMRLTTLLGIP-----VSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLND- 230
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
E ++ P +K+L +A G S+ L EG ++ G YG+LG S
Sbjct: 231 ETNRA------YPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLG-HGFS 283
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
P + L TI+ +ACGN + A+ + S G
Sbjct: 284 SNEMLPRMVMELMGSTISQVACGNRHTLAL-------------------------VPSRG 318
Query: 390 KIYAFGRHDYGRLGLKN 406
+IY FG G+LG +N
Sbjct: 319 RIYGFGLGSSGQLGTRN 335
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ IP D + IACG+
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGH---------------- 45
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L + GK+YA G +DY +LG + P P IP LQD IT IA
Sbjct: 46 ----------RHTLFLTASGKVYACGSNDYSQLGHE---LPTKRPLQIPELQDYVITQIA 92
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G ++ WG QLG+ + DI++ KI + L + TV+Q+A G HS
Sbjct: 93 CGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKI-VRNLVSKTVVQIACGSNHS 151
Query: 490 VIL 492
+ L
Sbjct: 152 LAL 154
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 162/368 (44%), Gaps = 31/368 (8%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGP-DVMERKTF 62
K AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 21 KFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTC 80
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEG--ALGREAEGDSEFIPQTVNLPK 120
+ V G HT+ TE G VY G N+EG LG E ++ +
Sbjct: 81 VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH 140
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
K Q+SAG + S AL EDG ++ WG +S G +GLK P ++ + I+ G
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD--NSEGQIGLKNVSNVCVPQQVTIGKPVSWISCG 198
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H +T+ G L G PE G+LG Q + + +S E+P K + V
Sbjct: 199 YYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-----EIPEK---VIQVAC 250
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G +T + ++ ++ FGL + QLG + S P +I+++ D+ + ++ G+
Sbjct: 251 GGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETS------EPKVIENIRDQTISYISCGE 304
Query: 301 HHSLALNSEGKIYAF--GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC--VS 356
+H+ + G +Y F GRH LGL+N + PT + + +ACG C V
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFI-PTLCSNFLRFIVKLVACGGCHMVV 363
Query: 357 FAIDSEGV 364
FA GV
Sbjct: 364 FAAPHRGV 371
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 47/349 (13%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V ++ G +H ++T L G GQLG ++ + S+ + L+P +V L
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPT--CVKALKPEKVKLAA-- 93
Query: 235 IDDVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEVQKSGNTC-FFTPHLIKSLSDKK 292
G +T +S++G ++ A G NN QLG D+E + + + FFT S+ K
Sbjct: 94 -----CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT-------SEHK 141
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
L++G + S AL +G+++ +G + G++GLKNVS P K ++ I+CG
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCV---PQQVTIGKPVSWISCG 198
Query: 353 NCVSFAIDSEGVLYGWG-------------MGNG-------------YQLGNGKEDDILN 386
S + ++G LY +G +GN Q+ G E ++
Sbjct: 199 YYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL 258
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+E +Y FG +G+LGL +EP I +++D+TI+ I+CG + I G++Y
Sbjct: 259 TENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+G G +LG G E+ + + V VA GG H V+ A P
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAP 367
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 165/396 (41%), Gaps = 62/396 (15%)
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKI 177
K A +S G H+ + DG ++ WG+ GL Q TP+++ES+ + I+ +
Sbjct: 1194 KHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMM 1253
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR----- 232
+ G +H V++ ++ + G + GQLG G+S P +P KR
Sbjct: 1254 SLGGEHTVVIDRSFHIYSWGNGKYGQLGH------------GVS--TPHNLP-KRIEEFA 1298
Query: 233 -KHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ I + TG ++T + S G + AFG N + QLG D + T T + +
Sbjct: 1299 GQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQP 1358
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ T + G HS+ S G +Y+FG + G+LG +E P I L+ K I I
Sbjct: 1359 TRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLG-HGSTESCRYPKLIQGLKGKNIKRIT 1417
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------------------- 385
CG + +Y WG G LG G + L
Sbjct: 1418 CGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTAT 1477
Query: 386 --------NSEGKIYAFGRHDYGRLGL----KNVSEPVTEPTPIPSLQDKTITSIACGNC 433
N+ G +Y G ++G+LG+ ++ S P IPS+ + +A G
Sbjct: 1478 LTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAE 1537
Query: 434 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+ I S G LY WG G Q+GNGK D P ++
Sbjct: 1538 FNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV 1573
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 167/382 (43%), Gaps = 57/382 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFAL-VEDLDN--VVEVVVGGMHTVCLTEDGKV 90
T G + T G +GQLG G + ++ + VE L ++ + +GG HTV + +
Sbjct: 1210 TVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHI 1269
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--------KAVQISAGDSHSVALLEDGTVY 142
Y+WG G LG NLPK K I+ G H++ L G ++
Sbjct: 1270 YSWGNGKYGQLGHGVSTPH-------NLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLF 1322
Query: 143 AWGSFRDSHGSMGLKG-EGIQKTPLKLESV--------SGIVKIASGADHFVMLTSRGNL 193
A+GS + HG +GL + P ++ + + + I G H V+ TS G++
Sbjct: 1323 AFGS--NEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDV 1380
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSK-GS 252
+ G +GQLG S + R ++ LK K+I + G Y+T +++ S
Sbjct: 1381 YSFGANAKGQLGH-----GSTESCRYPKLIQ----GLKGKNIKRITCGPYHTVVTTDLDS 1431
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL------ 306
+ +G + LG ++ + P L++ +K+ + G +H+ L
Sbjct: 1432 VYCWGQGEHMCLGTGSNKNE-------LVPKLVELFVNKRVERVVCGLYHTATLTQPMGD 1484
Query: 307 -NSEGKIYAFGRHDYGRLGL----KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
N+ G +Y G ++G+LG+ ++ S P IPS+ + +A G + I S
Sbjct: 1485 SNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITS 1544
Query: 362 EGVLYGWGMGNGYQLGNGKEDD 383
G LY WG G Q+GNGK D
Sbjct: 1545 NGALYMWGAGTHGQIGNGKNQD 1566
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 129/325 (39%), Gaps = 48/325 (14%)
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID 236
++ G +H ++T G L T G GQLG +A ++ M + P+ +
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGH--GLAAGKHQSTPMRVESLKQTPIMMMSLG 1256
Query: 237 DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
G + I I ++G Y QLG S T P I+ + +K + +
Sbjct: 1257 ----GEHTVVIDRSFHIYSWGNGKYGQLGHGVS-------TPHNLPKRIEEFAGQKISSI 1305
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL------QDKTITSIA 350
A+G H+L L S G ++AFG +++G+LGL ++ + PT + + Q +T I
Sbjct: 1306 ATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIF 1365
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG+ S S G +Y +G QLG+G +E
Sbjct: 1366 CGHSHSVLRTSHGDVYSFGANAKGQLGHGS---------------------------TES 1398
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P I L+ K I I CG + +Y WG G LG G + L P +E
Sbjct: 1399 CRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVE 1458
Query: 471 GKQLNNYTVLQVASGGQHSVILAKP 495
N V +V G H+ L +P
Sbjct: 1459 --LFVNKRVERVVCGLYHTATLTQP 1481
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 107/263 (40%), Gaps = 30/263 (11%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG--------PDVMERKTFALVEDLDNVVEVVVGGMH 80
TL ++GG + G + GQLGL P + V + G H
Sbjct: 1312 TLVLRSGGDL-FAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSH 1370
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDG 139
+V T G VY++G N +G LG + + L K + +I+ G H+V +
Sbjct: 1371 SVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLD 1430
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLT-------SR 190
+VY WG + H +G + P +E + ++ G H LT +
Sbjct: 1431 SVYCWG--QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTG 1488
Query: 191 GNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGV-YNTFI 247
GN+ G E G+LG RS S + P +P + ++ D+ +G +N I
Sbjct: 1489 GNVYICGSSEHGKLGIGGDPRSPSLDKAY------PAIIPSINSANVVDLASGAEFNALI 1542
Query: 248 SSKGSILAFGLNNYSQLGEADSE 270
+S G++ +G + Q+G ++
Sbjct: 1543 TSNGALYMWGAGTHGQIGNGKNQ 1565
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 332 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+ P P +K S++CG + I +G L+ WG QLG+G
Sbjct: 1182 LVHPMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHG------------ 1229
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
A G+H + P + SL+ I ++ G + ID +Y WG G
Sbjct: 1230 LAAGKHQ-------------STPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGK 1276
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
QLG+G P +IE + + +A+G H+++L
Sbjct: 1277 YGQLGHGVSTPHNLPKRIE--EFAGQKISSIATGYWHTLVL 1315
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 36 GGVVLTCGQGDTGQLGLGPD----VMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGK 89
GG V CG + G+LG+G D +++ A++ ++ NVV++ G +T +G
Sbjct: 1488 GGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGA 1547
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ 124
+Y WG G +G D+ +IP V+L + Q
Sbjct: 1548 LYMWGAGTHGQIGNGKNQDT-WIPTRVSLSSEKNQ 1581
>gi|162453643|ref|YP_001616010.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161164225|emb|CAN95530.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1134
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 201/544 (36%), Gaps = 118/544 (21%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V+ G+G G+LG G + T V +L + V+V GG HT L G V WG
Sbjct: 538 GAVVCWGEGQWGRLGNG-STADATTPVTVSNLTDAVDVDAGGGHTCALRATGAVVCWGRG 596
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG GD + P TV A+ ISAG HS AL G WG R +HG +G
Sbjct: 597 TNGQLGNGISGD-QSAPVTVFGLNDAISISAGWGHSCALRATGGAVCWG--RGNHGQLGN 653
Query: 157 KGEGIQKTPLKLESVSGIVKIASGA-----------DHFVMLTSRGNLLTAGCPEQGQLG 205
TP+++ ++S V I + H L G + G GQLG
Sbjct: 654 GSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLG 713
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQL 264
S E G L V G+ +T + S G I +G + Q+
Sbjct: 714 -----------YGAFSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQI 762
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G + P + +L D +A+G H+ AL G++ +G ++GRLG
Sbjct: 763 GNGSAATA-------LLPAPVVNLGDA--VEIAAGYAHTCALRRNGQVECWGEGEFGRLG 813
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD- 383
+ ++ T PTP+ +L D I G + A+ G + WG G +LGNG +DD
Sbjct: 814 NGSGADRTT-PTPVLNLTDA--AHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDR 870
Query: 384 -----------------------ILNSEGKIYAFGRHDYGRLGLKNVSE---PVT----- 412
+ G++ +G GRLG + ++ PVT
Sbjct: 871 NTPVAVSGLTDAVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQTAPVTVLDIA 930
Query: 413 -----------------------------------------EPTPIPSLQDKTITSIACG 431
P + L D +A G
Sbjct: 931 DAVAVAAGGEHTCALRASGAVSCWGGGGSGRLGNASTANSLRPVAVTGLSDA--IGLAAG 988
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ A+ S G + WG G +LGNG P+ + G LQV++G H+
Sbjct: 989 RLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATIPIPVSGLG----DALQVSAGTSHTCA 1044
Query: 492 LAKP 495
+ P
Sbjct: 1045 ITAP 1048
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 193/479 (40%), Gaps = 72/479 (15%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C GG V G + G+LG G M V +L++ V V VG H L G V
Sbjct: 433 CAVVGGKVDCWGNNENGELGDGT-TMTTGRATPVSNLNDAVAVGVGRFHACALRATGAVV 491
Query: 92 TWGCNDEGALGREAEGDS--EFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG GA GR G + P V+ AV + AG+SH+ AL G V WG +
Sbjct: 492 CWG---SGANGRLGNGSTAGRTTPTPVSGLSDAVALDAGESHTCALRATGAVVCWGEGQ- 547
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +G TP+ + +++ V + +G H L + G ++ G GQLG
Sbjct: 548 -WGRLGNGSTADATTPVTVSNLTDAVDVDAGGGHTCALRATGAVVCWGRGTNGQLG---- 602
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLG 265
G+S + P+ ++D + ++ + + G + +G N+ QLG
Sbjct: 603 --------NGISGDQ--SAPVTVFGLNDAISISAGWGHSCALRATGGAVCWGRGNHGQLG 652
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDK---------KFTMLASGQHHSLALNSEGKIYAFG 316
+ +TP + +LSD + L + H+ AL G + +G
Sbjct: 653 NGSTSS-------VYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWG 705
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
G+LG S + + L ++A G + A+ S G + WG + Q+
Sbjct: 706 YGVDGQLGYGAFS---SSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQI 762
Query: 377 GNGKE-------------DDI-----------LNSEGKIYAFGRHDYGRLGLKNVSEPVT 412
GNG D + L G++ +G ++GRLG + ++ T
Sbjct: 763 GNGSAATALLPAPVVNLGDAVEIAAGYAHTCALRRNGQVECWGEGEFGRLGNGSGADRTT 822
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
PTP+ +L D I G + A+ G + WG G +LGNG +DD P+ + G
Sbjct: 823 -PTPVLNLTDA--AHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDRNTPVAVSG 878
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 177/446 (39%), Gaps = 67/446 (15%)
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
C GKV WG N+ G LG + NL AV + G H+ AL G V
Sbjct: 432 TCAVVGGKVDCWGNNENGELGDGTTMTTGRATPVSNL-NDAVAVGVGRFHACALRATGAV 490
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WGS ++G +G + TP + +S V + +G H L + G ++ C +
Sbjct: 491 VCWGS--GANGRLGNGSTAGRTTPTPVSGLSDAVALDAGESHTCALRATGAVV---CWGE 545
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
GQ GR+ S + P V +D G + + + G+++ +G
Sbjct: 546 GQWGRLGNGSTA-------DATTPVTVSNLTDAVDVDAGGGHTCALRATGAVVCWGRGTN 598
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
QLG S Q + P + L+D +++G HS AL + G +GR ++G
Sbjct: 599 GQLGNGISGDQSA-------PVTVFGLNDA--ISISAGWGHSCALRATGGAVCWGRGNHG 649
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF-----------AIDSEGVLYGWGM 370
+LG + S V P +P+L D +I N ++ A+ G + WG
Sbjct: 650 QLGNGSTSS-VYTPVEVPNLSDA--VAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGY 706
Query: 371 GNGYQLGNGKED------DILN------------------SEGKIYAFGRHDYGRLGLKN 406
G QLG G D+L+ S G+I +G D G++G +
Sbjct: 707 GVDGQLGYGAFSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGS 766
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+ + P P+ +L D IA G + A+ G + WG G +LGNG D P
Sbjct: 767 AATALL-PAPVVNLGDA--VEIAAGYAHTCALRRNGQVECWGEGEFGRLGNGSGADRTTP 823
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVIL 492
+ LN + +G H+ L
Sbjct: 824 TPV----LNLTDAAHITAGTAHTCAL 845
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 198/499 (39%), Gaps = 82/499 (16%)
Query: 33 KTGGGVVLTCGQGDTGQLGLG-----------PDV-----MERKTFALVEDLDNVVEVVV 76
TGG V G+G+ GQLG G P++ +E F +LD
Sbjct: 636 ATGGAVCW--GRGNHGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFG--- 690
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
HT L +G V WG +G LG A SE ++L A ++AG SH+ A+
Sbjct: 691 ---HTCALRRNGTVRCWGYGVDGQLGYGAFSSSEAGVDVLDL-SDARAVAAGMSHTCAMR 746
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTA 196
G + WG+ DS G +G P + ++ V+IA+G H L G +
Sbjct: 747 STGEIRCWGAA-DS-GQIGNGSAATALLPAPVVNLGDAVEIAAGYAHTCALRRNGQVE-- 802
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILA 255
C +G+ GR+ S G P V L + G +T + G +
Sbjct: 803 -CWGEGEFGRLGNGS-------GADRTTPTPV-LNLTDAAHITAGTAHTCALLQSGQVRC 853
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G Y +LG + + TP + L+D +++G H+ A+ G++ +
Sbjct: 854 WGEGAYGRLGNGSQDDRN-------TPVAVSGLTDA--VAISAGDAHTCAVRQNGQVSCW 904
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW------- 368
G GRLG + ++ + P+ L ++A G + A+ + G + W
Sbjct: 905 GYAALGRLGNGSTTD---QTAPVTVLDIADAVAVAAGGEHTCALRASGAVSCWGGGGSGR 961
Query: 369 ----------------GMGNGYQLGNGK-EDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G+ + L G+ ++S G + +G GRLG +
Sbjct: 962 LGNASTANSLRPVAVTGLSDAIGLAAGRLHTCAVHSTGAVSCWGSGLDGRLG-NGATTSA 1020
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
T P P+ L D ++ G + AI + G + WG+G +LG+G L P+ +
Sbjct: 1021 TIPIPVSGLGDAL--QVSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATALTPVPVA- 1077
Query: 472 KQLNNYTVLQVASGGQHSV 490
N + +++G ++SV
Sbjct: 1078 ---NVADAVMISAGRRNSV 1093
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 113/292 (38%), Gaps = 50/292 (17%)
Query: 236 DDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
D + NT G + +G N +LG D +G TP + +L+D
Sbjct: 423 DPISANQRNTCAVVGGKVDCWGNNENGELG--DGTTMTTGRA---TP--VSNLNDA--VA 473
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 355
+ G+ H+ AL + G + +G GRLG + T PTP+ L D ++ G
Sbjct: 474 VGVGRFHACALRATGAVVCWGSGANGRLG-NGSTAGRTTPTPVSGLSDAV--ALDAGESH 530
Query: 356 SFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------ILNSEGKI 391
+ A+ + G + WG G +LGNG D L + G +
Sbjct: 531 TCALRATGAVVCWGEGQWGRLGNGSTADATTPVTVSNLTDAVDVDAGGGHTCALRATGAV 590
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+GR G+LG +S + P + L D S G+ S A+ + G WG GN
Sbjct: 591 VCWGRGTNGQLG-NGISGDQSAPVTVFGLNDAISISAGWGH--SCALRATGGAVCWGRGN 647
Query: 452 GYQLGNGKEDDILEPMK---------IEGKQLNNYTVLQVASGGQHSVILAK 494
QLGNG + P++ IE NY L G H+ L +
Sbjct: 648 HGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFG--HTCALRR 697
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 142/351 (40%), Gaps = 73/351 (20%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G+G+ G+LG G +R T V +L + + G HT L + G+V WG EGA G
Sbjct: 805 GEGEFGRLGNGSGA-DRTTPTPVLNLTDAAHITAGTAHTCALLQSGQVRCWG---EGAYG 860
Query: 103 REAEG--DSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG 160
R G D P V+ AV ISAGD+H+ A+ ++G V WG + ++G G G
Sbjct: 861 RLGNGSQDDRNTPVAVSGLTDAVAISAGDAHTCAVRQNGQVSCWG-----YAALGRLGNG 915
Query: 161 I---QKTPLKLESVSGIVKIASGADHFVMLTSRGNL------------------------ 193
Q P+ + ++ V +A+G +H L + G +
Sbjct: 916 STTDQTAPVTVLDIADAVAVAAGGEHTCALRASGAVSCWGGGGSGRLGNASTANSLRPVA 975
Query: 194 ---------LTAG----CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD--- 237
L AG C G ++ + + R G +P+ + D
Sbjct: 976 VTGLSDAIGLAAGRLHTCAVH-STGAVSCWGSGLDGRLGNGATTSATIPIPVSGLGDALQ 1034
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
V G +T I++ G +GL +LG+ TP + +++D M+
Sbjct: 1035 VSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATA-------LTPVPVANVADA--VMI 1085
Query: 297 ASGQH------HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
++G+ H++ L G + A+G GRLG N S V+ P + L
Sbjct: 1086 SAGRRNSVGASHTVVLRRTGSVAAWGAVGVGRLG--NGSPKVSFPIAVVGL 1134
>gi|358458193|ref|ZP_09168405.1| regulator of chromosome condensation RCC1 [Frankia sp. CN3]
gi|357078539|gb|EHI87986.1| regulator of chromosome condensation RCC1 [Frankia sp. CN3]
Length = 405
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 167/389 (42%), Gaps = 65/389 (16%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIP-QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
G V WG N +G LG + P QT + + ++AG+S A+ G V AWG
Sbjct: 59 GLVLPWGANGQGQLG-DGTTTGRLTPVQTAGI-DEITAVAAGESTGYAM-AFGAVQAWGD 115
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+SH +G + TP+++ + +V + +GA + + S G G G +G
Sbjct: 116 --NSHNELGDGTTTDRLTPVQVSDLVDVVAVGAGAHNGYAVRSDGTAWAWGLNNHGSVGD 173
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTF-ISSKGSILAFGLNNYS 262
T + S P++ + DV G++ + + S G+ A+G NN
Sbjct: 174 GTTINRS--------------TPVQVSDLTDVTAVAGGLHTGYAVRSDGTAWAWGFNNAG 219
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
LG+ + T TP + L+D T +A G + AL S+G ++A+G + +G
Sbjct: 220 ALGDGTT-------TDSPTPVQVSGLTD--VTAVAGGVYRGYALRSDGTVWAWGSNSFGA 270
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + +T P P+ L I +IA G+ +A+ +G ++ WG QLGNG
Sbjct: 271 LGDGTTTGRLT-PVPVAGLTQ--IIAIAAGSNSGYALRGDGTVWAWGYNYEGQLGNGTTT 327
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
+ PTP+ +T+IA G +A+ S G
Sbjct: 328 N-----------------------------SPTPVQVSGLTGVTAIAAGAYTGYALRSNG 358
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
++ WG G G LGNG + L P+++ G
Sbjct: 359 TVWAWGSGAGGALGNGTTTNRLTPVRVTG 387
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 41/377 (10%)
Query: 14 ENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVE 73
E P+ + +S+ V G G+VL G GQLG G R T +D +
Sbjct: 40 EGPAPALLGSSDQVQ----YPGPGLVLPWGANGQGQLGDG-TTTGRLTPVQTAGIDEITA 94
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSV 133
V G T G V WG N LG D P V+ V + AG +
Sbjct: 95 VAA-GESTGYAMAFGAVQAWGDNSHNELGDGTTTD-RLTPVQVSDLVDVVAVGAGAHNGY 152
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGN 192
A+ DGT +AWG ++HGS+G G I + TP+++ ++ + +A G + S G
Sbjct: 153 AVRSDGTAWAWG--LNNHGSVG-DGTTINRSTPVQVSDLTDVTAVAGGLHTGYAVRSDGT 209
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT---GVYNTF-IS 248
G G LG T + P++ + DV GVY + +
Sbjct: 210 AWAWGFNNAGALGDGTTTDS--------------PTPVQVSGLTDVTAVAGGVYRGYALR 255
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
S G++ A+G N++ LG+ + T TP + L+ + +A+G + AL
Sbjct: 256 SDGTVWAWGSNSFGALGDGTT-------TGRLTPVPVAGLT--QIIAIAAGSNSGYALRG 306
Query: 309 EGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGW 368
+G ++A+G + G+LG + PTP+ +T+IA G +A+ S G ++ W
Sbjct: 307 DGTVWAWGYNYEGQLGNGTTTN---SPTPVQVSGLTGVTAIAAGAYTGYALRSNGTVWAW 363
Query: 369 GMGNGYQLGNGKEDDIL 385
G G G LGNG + L
Sbjct: 364 GSGAGGALGNGTTTNRL 380
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V G G LG G R T V L ++ + G L DG V+ WG N
Sbjct: 258 GTVWAWGSNSFGALGDG-TTTGRLTPVPVAGLTQIIAIAAGSNSGYALRGDGTVWAWGYN 316
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
EG LG +S P V+ I+AG AL +GTV+AWGS G+ G
Sbjct: 317 YEGQLGNGTTTNSP-TPVQVSGLTGVTAIAAGAYTGYALRSNGTVWAWGS-----GAGGA 370
Query: 157 KGEGIQK---TPLKLESVSGIVKIASG 180
G G TP+++ +SGI IA G
Sbjct: 371 LGNGTTTNRLTPVRVTGLSGINTIAGG 397
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 165/366 (45%), Gaps = 37/366 (10%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPD-VMERKTF 62
K AEN K ++ ++ + L C TG + G + GQLGLG + + T
Sbjct: 107 KFAENIPSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTC 166
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNLPK- 120
+ V G HT+ TE G VY G N +G LG + E + F + +
Sbjct: 167 VKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRY 226
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
K Q+SAG + S AL EDG +Y WG +S G +GL E P ++ + ++ G
Sbjct: 227 KIKQLSAGSNTSAALTEDGELYMWGD--NSEGQIGLASESNVCVPCRVVIGKPVSWVSCG 284
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H ++T+ G L T G PE G+LG +++ + P VP ++ V
Sbjct: 285 YYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRI--------PQLVPGISGKVNQVAC 336
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF---TPHLIKSLSDKKFTMLA 297
G +T ++ + FGL + QLG TC F P +++ L +K +A
Sbjct: 337 GGGHTVALTEEDVYTFGLGEFGQLGLG---------TCIFETSVPKVVEHLRKQKIHYVA 387
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNC- 354
G++H+ ++ G +Y FG +G+LGL +N + PT + ++ +ACG C
Sbjct: 388 CGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFI-PTLCSNFLRFSVHLVACGGCH 446
Query: 355 -VSFAI 359
+ FAI
Sbjct: 447 MLVFAI 452
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 184/448 (41%), Gaps = 66/448 (14%)
Query: 56 VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT 115
V E++ + +D E+ G V+T+G +E IP
Sbjct: 66 VEEKRETMIYDDFRKKDELRANTYRKFRTRHSGAVFTFG----------KSKFAENIPSK 115
Query: 116 VNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-G 173
L + Q+S GD H+ + + +Y GS ++ G +GL + P ++++
Sbjct: 116 FWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGS--NNWGQLGLGSKTTVNKPTCVKALKPE 173
Query: 174 IVKIAS-GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
VK A+ G +H ++ T GN+ AG GQLG + R +SF R
Sbjct: 174 KVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLG--LGDTEERTTFHQISFF------TSR 225
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ G + +G N+ Q+G A N C + + K
Sbjct: 226 YKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE-----SNVCV----PCRVVIGK 276
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE---PTPIPSLQDKTITS 348
+ ++ G +HS + ++G++Y FG + G+LGL SE + P +P + K +
Sbjct: 277 PVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLS--SEQLKNHRIPQLVPGISGK-VNQ 333
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+ACG + A+ E V Y FG ++G+LGL
Sbjct: 334 VACGGGHTVALTEEDV---------------------------YTFGLGEFGQLGLGTCI 366
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ P + L+ + I +ACG + I G++Y +G G +LG G+E+ + +
Sbjct: 367 FETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIP 426
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAKPK 496
++V VA GG H ++ A P+
Sbjct: 427 TLCSNFLRFSVHLVACGGCHMLVFAIPR 454
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 88/245 (35%), Gaps = 59/245 (24%)
Query: 270 EVQKSGNTCFFTPHLIK------SLSDKKFTM----------LASGQHHSLALNSEGKIY 313
E+ G FF K S+ +K+ TM L + + G ++
Sbjct: 42 EIHSLGKKLFFHSFRSKPFQANLSVEEKRETMIYDDFRKKDELRANTYRKFRTRHSGAVF 101
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPS---LQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
FG+ + IPS L++ T+ ++CG+ + + LY G
Sbjct: 102 TFGKSKFAE--------------NIPSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGS 147
Query: 371 GNGYQLGNGKEDDI--------LNSE------------------GKIYAFGRHDYGRLGL 404
N QLG G + + L E G +YA G + G+LGL
Sbjct: 148 NNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGL 207
Query: 405 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
+ E T I ++ G+ S A+ +G LY WG + Q+G E ++
Sbjct: 208 GDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVC 267
Query: 465 EPMKI 469
P ++
Sbjct: 268 VPCRV 272
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 170/376 (45%), Gaps = 48/376 (12%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKT------FALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
V G GD G+LGLG +E + F L D + GG HT+ LT++G+V+
Sbjct: 29 VAALWGNGDYGRLGLGS--LESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVF 86
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDS 150
G ND G LG P ++ ++ V++SAG+ HS A+ DG ++ WG R+S
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWG--RNS 144
Query: 151 HGSMGL-KGEG-IQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
G +GL KG G + TP K++ ++ + +A G++H + +T G +L+ G G+LG
Sbjct: 145 GGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGH 204
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG------VYNTFISSKGSILAFGLNN 260
Q S G S P K+ D + +++ I KG++ FG
Sbjct: 205 GRQSSI-----LGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT 259
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
G + E F P++++ + + +A G +H+ + G +Y++G ++
Sbjct: 260 EKGFGRPNEE---------FRPNIVEEIPFSE--EVACGGYHTCVVTDSGDLYSWGSNEN 308
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL-YGWGMGNGY----- 374
G LGL + SL ++ ++CG + + + + +GWG NG
Sbjct: 309 GCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWGWGGANGTFFEEG 368
Query: 375 -----QLGNGKEDDIL 385
QLG+G + D
Sbjct: 369 HSSGGQLGHGNDVDYF 384
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 36/255 (14%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
G + F++ G + A GLN++ QLG S T P I ++ +++G
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSV------THMLEPVEISGFHER-VVEVSAGN 125
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
HHS A+ ++GK++ +GR+ G+LGL K + V+ PT + L D + ++A G+ S A+
Sbjct: 126 HHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAV 185
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP--I 417
EG + WG +LG+G++ IL S TE TP I
Sbjct: 186 TEEGEVLSWGAAGSGRLGHGRQSSIL--------------------GFSLTSTEYTPRLI 225
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY 477
+ I IA G S ID +G L+ +G + G G+ ++ P +E +
Sbjct: 226 KNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGFGRPNEEFRPNIVEEIPFSE- 282
Query: 478 TVLQVASGGQHSVIL 492
+VA GG H+ ++
Sbjct: 283 ---EVACGGYHTCVV 294
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+G +Y +LG E + S C P + +D + LA G H+L L G+++A
Sbjct: 33 WGNGDYGRLGLGSLESRWSPTVC---PFFLARAADPPAS-LACGGAHTLFLTQNGRVFAT 88
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
G +D+G+LG+ + EP I ++ + ++ GN S A+ ++G L+ WG +G Q
Sbjct: 89 GLNDFGQLGIGTSVTHMLEPVEISGFHER-VVEVSAGNHHSCAVTADGKLFVWGRNSGGQ 147
Query: 376 LGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 435
LG GK GK+ V+ PT + L D + ++A G+ S
Sbjct: 148 LGLGK------GAGKV-------------------VSTPTKVDCLTDLRVKTVALGSEHS 182
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDIL---------EPMKIEGKQLNNYTVLQVASGG 486
A+ EG + WG +LG+G++ IL P I K + + ++A+G
Sbjct: 183 IAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLI--KNFDGIKIKKIAAGM 240
Query: 487 QHSVIL 492
HS +
Sbjct: 241 LHSACI 246
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 145/357 (40%), Gaps = 58/357 (16%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
+A G H + LT G + G + GQLG T + LEP E+ +
Sbjct: 67 ASLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVT---------HMLEPVEISGFHER 117
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ +V G +++ +++ G + +G N+ QLG + K TP + L+D +
Sbjct: 118 VVEVSAGNHHSCAVTADGKLFVWGRNSGGQLG-----LGKGAGKVVSTPTKVDCLTDLRV 172
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLG------LKNVSEPVTEPTP--IPSLQDKT 345
+A G HS+A+ EG++ ++G GRLG + S TE TP I +
Sbjct: 173 KTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIK 232
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
I IA G S ID +G L+ +G G E+
Sbjct: 233 IKKIAAGMLHSACIDEKGTLFIFGQKTEKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTC 292
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
++ G +Y++G ++ G LGL + SL ++ ++CG + + + +
Sbjct: 293 VVTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDI 352
Query: 444 L-YGWGMGNGY----------QLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
+GWG NG QLG+G + D EPM + N + V+ G H+
Sbjct: 353 YTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFG--TNARAVHVSCGFNHT 407
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 142/345 (41%), Gaps = 47/345 (13%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL-DNVVEVVVGGMHTVCLTEDGKVYT 92
T G V G D GQLG+G V + + VVEV G H+ +T DGK++
Sbjct: 80 TQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFV 139
Query: 93 WGCNDEGALGR-EAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAW---GS 146
WG N G LG + G P V+ + ++ G HS+A+ E+G V +W GS
Sbjct: 140 WGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS 199
Query: 147 FRDSHGS----MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
R HG +G + TP +++ G I KIA+G H + +G L G
Sbjct: 200 GRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT 259
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLN 259
+ GR + E+P ++V G Y+T ++ G + ++G N
Sbjct: 260 EKGFGRPNEEFRPNIVE---------EIPFS----EEVACGGYHTCVVTDSGDLYSWGSN 306
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIK-SLSDKKFTMLASGQHHSLALN----------- 307
LG +++ +S P ++K SL + ++ G H+ ++
Sbjct: 307 ENGCLGLGGTDMVRS-------PEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWGWGG 359
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ G + G G+LG N + EP +P + ++CG
Sbjct: 360 ANGTFFEEGHSSGGQLGHGNDVD-YFEPMMVPFGTNARAVHVSCG 403
>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1190
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 164/372 (44%), Gaps = 51/372 (13%)
Query: 42 CGQGDTGQLGLGPDVM----ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
G G T + VM +RKT+ + V+V G H++ + DG Y WG ND
Sbjct: 704 LGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRND 763
Query: 98 EGALGREAEGDSEFIPQTVNLPKKA------VQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+G LG D + P V P VQ+SAG HS+AL DG YAWG ++
Sbjct: 764 DGRLGDGTSTD-QHTPVRVKKPAGTSTDFTYVQVSAGYHHSLALGSDGNAYAWG--YNNS 820
Query: 152 GSMGLKGEGIQKTPLKLESVSGI------VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
G +G + T ++++ +G V++++GA H + L S GN G GQLG
Sbjct: 821 GQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLG 880
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
T + + G P P + +++ + S G A+G N QLG
Sbjct: 881 DGTSTDRATPVKVGT----PAGTPTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLG 936
Query: 266 EADSEVQKSGNTCFFTPH---------LIKSLSDK--KFTMLASGQHHSLALNSEGKIYA 314
K G FF+P+ + +DK K + +G HSLAL S+G YA
Sbjct: 937 NN----SKGG---FFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHSLALGSDGNAYA 989
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITS-------IACGNCVSFAIDSEGVLYG 367
+G + G+LG N S+ T P + T TS ++ G S A+ S+G Y
Sbjct: 990 WGFNSNGQLG-NNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQYHSLALGSDGNAYA 1048
Query: 368 WGMGNGY-QLGN 378
WG NGY QLGN
Sbjct: 1049 WG-DNGYGQLGN 1059
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 150/332 (45%), Gaps = 36/332 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPD------VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
G G+ D G+LG G V +K D V+V G H++ L DG
Sbjct: 754 GNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDF-TYVQVSAGYHHSLALGSDGNA 812
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPKKA--------VQISAGDSHSVALLEDGTVY 142
Y WG N+ G LG +G S +V + K A VQ+SAG HS+AL DG Y
Sbjct: 813 YAWGYNNSGQLG---DGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLALGSDGNAY 869
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI------VKIASGADHFVMLTSRGNLLTA 196
AWG ++ G +G + TP+K+ + +G +I +G H + + S G
Sbjct: 870 AWG--LNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAVGSDGYAYAW 927
Query: 197 GCPEQGQLGRITQ---RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGS 252
G GQLG ++ S + N R + P + K ++ V G +++ + S G+
Sbjct: 928 GYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVN-VTAGFWHSLALGSDGN 986
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
A+G N+ QLG S+ + + K ++++GQ+HSLAL S+G
Sbjct: 987 AYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQYHSLALGSDGNA 1046
Query: 313 YAFGRHDYGRLGLKNV-----SEPVTEPTPIP 339
YA+G + YG+LG ++ + P P+P
Sbjct: 1047 YAWGDNGYGQLGNNSIPTGSNNNEARSPVPVP 1078
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 163/384 (42%), Gaps = 50/384 (13%)
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL-----------KLESVSGIVKIASG 180
S+A+ DG YAWG + G E + TP+ L + V++++G
Sbjct: 684 SLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVSAG 743
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
+ H + + S GN G + G+LG T S + + +P ++ V
Sbjct: 744 SQHSLAVGSDGNAYAWGRNDDGRLGDGT----STDQHTPVRVKKPAGTSTDFTYV-QVSA 798
Query: 241 GVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +++ + S G+ A+G NN QLG+ S + T + +D + +++G
Sbjct: 799 GYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRA---TSVRVKKPAGTSTDFTYVQVSAG 855
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
HSLAL S+G YA+G +++G+LG + + PV TP + D T I G S
Sbjct: 856 AFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHS 915
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
A+ S+G Y WG QLGN NS+G ++ PV P
Sbjct: 916 LAVGSDGYAYAWGYNFSGQLGN-------NSKGGFFSPN------------PNPVRVRNP 956
Query: 417 I-PSLQDKTI--TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQ 473
P+ DK + ++ G S A+ S+G Y WG + QLGN D P+ +
Sbjct: 957 ASPNDADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSA 1016
Query: 474 LNNYT-----VLQVASGGQHSVIL 492
T + V++G HS+ L
Sbjct: 1017 SPTDTSKGLKAVLVSTGQYHSLAL 1040
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 138/327 (42%), Gaps = 58/327 (17%)
Query: 187 LTSRGNLLTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
L SR + + + QLG T + +ARRG+ F + + V ++
Sbjct: 631 LKSRNSTWSISPDKGSQLGGESTTITPPDSARRGIRFSQ-----VSASSFVSVTDFGFSL 685
Query: 246 FISSKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSL---------SDKKFTM 295
+ S G+ A+G N +LG+ SE +S TP ++K +D +
Sbjct: 686 AVGSDGNAYAWGGNKKGELGDGTTSENARS------TPVMVKQPDRKTYPDLPADFTYVQ 739
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKTITSIACG 352
+++G HSLA+ S+G YA+GR+D GRLG ++ PV P + D T ++ G
Sbjct: 740 VSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAG 799
Query: 353 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------------------- 383
S A+ S+G Y WG N QLG+G D
Sbjct: 800 YHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHS 859
Query: 384 -ILNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
L S+G YA+G +++G+LG + + PV TP + D T I G S A+
Sbjct: 860 LALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAVG 919
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP 466
S+G Y WG QLGN + P
Sbjct: 920 SDGYAYAWGYNFSGQLGNNSKGGFFSP 946
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 64 LVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK-- 121
LV D + + H + + ++GKV+ W +G E+ G + ++LP++
Sbjct: 287 LVSDSTTYASIAIAADHLIAVGQNGKVHVWTN-----MG-ESTG------KAISLPRQAL 334
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGA 181
AV+++ +AL G V+ W + Q P+KL + IV++ S
Sbjct: 335 AVKVTGNADRLLALDNKGQVWTWKP---------AATDAKQIQPIKL--ANRIVQV-SAM 382
Query: 182 DH-FVMLTSRG--NLLTAG--------CPEQGQLGRI---TQRSASRNARRGMSFLEPGE 227
DH FV+L S G + L G P + I T ++A +++ + +PGE
Sbjct: 383 DHGFVLLDSTGQTSYLDNGQSQTESLFLPNHSAVTAISVNTTQAALVDSKGRIWAWKPGE 442
Query: 228 VPLK-----RKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
P++ ++++ V G T I +G++ A+ L+ Q G+
Sbjct: 443 TPIRADDGSQQYMQAVKAGSRITAIDRQGNMFAWSLDEQGQPGK 486
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 221/523 (42%), Gaps = 100/523 (19%)
Query: 39 VLTCGQGDTGQLGLGP--DVME-RKTFALVEDLDNVVE-VVVGGMHTVCLTEDGKVYTWG 94
+ + G G G LG G D+ E R +D +E + G H++CLT K+ TWG
Sbjct: 310 LFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWG 369
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKA-VQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
G LG E D + +L KK + ISAG+SHS A+ E +Y WG+ ++G
Sbjct: 370 QGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGT--GTYGR 427
Query: 154 MGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG-RITQR 210
+G + +K P +E + I+ ++ GA H + +T +G + G + G+LG QR
Sbjct: 428 LGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQR 487
Query: 211 SASRNARRGMSF----LEPGEVPLKRKHIDDVFTGVYN--TFISSKGSILAFGLNNYSQL 264
+ +SF +EP E+ ++ K+ + YN ++ G I ++G N L
Sbjct: 488 EGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLL 547
Query: 265 GEADS-------EV-QKSGNTCFFTPHLIKSLS------DKKFT----MLASGQHHSLAL 306
G E+ Q G P++ + + ++ F+ +A G ++++L
Sbjct: 548 GRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSL 607
Query: 307 NSEGKIYAFGRHDYGRLGLK------------------------NVSEPVTEPTPIPSLQ 342
+ G++Y FG + YG+L + SE ++ P
Sbjct: 608 TNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMS-LIKFPGET 666
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
I IACG FAI L+GWG R+D G+L
Sbjct: 667 TVRINYIACGGEHIFAISRMNELFGWG--------------------------RNDEGQL 700
Query: 403 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 462
GL VS+ EPT I + K I IACG+ S A+ + G L+ G +LG G+
Sbjct: 701 GLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQ--- 757
Query: 463 ILEPMKIEGKQLNNYTVLQ-------VASGGQHSVILAKPKPN 498
++ L ++T++Q VA G H + +A P+
Sbjct: 758 -----ALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPD 795
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 215/511 (42%), Gaps = 119/511 (23%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCN 96
+ T G G G+LG G D E+K L+EDLD ++ V G HT+ +T G VY +G
Sbjct: 417 LYTWGTGTYGRLGHGMDTSEKKP-KLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQG 475
Query: 97 DEGALG---REAEG---DSEFI--------PQTVNLPKK--AVQISAGDSHSVALLEDGT 140
G LG ++ EG E I PQ + + K A+ +AG +HS+ L + G
Sbjct: 476 KYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGK 535
Query: 141 VYAWGSFRDSHGSMG---------------LKGEGIQKTP----------LKLESVSG-- 173
+Y+WG + G +G + GE I K P LK E
Sbjct: 536 IYSWGY--NGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYE 593
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR-----------------NA 216
++++A G + V LT+ G + G GQL + ++ R ++
Sbjct: 594 VIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDS 653
Query: 217 RRGMSFLE-PGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKS 274
MS ++ PGE ++ I+ + G + F IS + +G N+ QLG
Sbjct: 654 SEQMSLIKFPGETTVR---INYIACGGEHIFAISRMNELFGWGRNDEGQLG--------L 702
Query: 275 GNTCFFT--PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP- 331
G FT P LI+ ++ K M+A G ++S A+++ G+++ G + G+LGL +
Sbjct: 703 GFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKG 762
Query: 332 -VTEPTPIPSLQDKTITSIACGNCVSFAID--------SEGVLYGWGMGNGYQLGNGKED 382
+ T I +L I S+ACG AI +G+ Y WG QLG G ++
Sbjct: 763 FLLSFTLIQNL--APIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKE 820
Query: 383 D------ILNSE-------------------GKIYAFGRHDYGRLGLKNVSEPVTEPTPI 417
D I N++ ++Y +G + Y +++ V P +
Sbjct: 821 DSNVPKKIHNAKERFKKVACGQDFSIGLTYGNQVYLWGNNKY--FCDSKITKDVDIPQLL 878
Query: 418 PSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
+L+ I IAC ++ +G + WG
Sbjct: 879 QALEQAQIKDIACSYKFCSVLNDKGEILIWG 909
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 215/515 (41%), Gaps = 121/515 (23%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGP--DVMERKTFALVEDLDNVVEVVV--GGMHTVCLTED 87
C T +LT GQG G+LG G DV+ K + DL + + G H+ ++E
Sbjct: 358 CLTRKKKILTWGQGQGGRLGHGDEDDVLVPKE---IYDLSKKKPIFISAGESHSAAISEK 414
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPK-KAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG G LG + SE P+ + +L + + + +S G H++A+ GTVYA+G
Sbjct: 415 LNLYTWGTGTYGRLGHGMDT-SEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFG 473
Query: 146 SFRDSHGSMGL---KGEGIQKTPLKL--------------ESVSGIVKIASGADHFVMLT 188
+ +G +G+ + EG+ P K+ + + + A+G +H + L
Sbjct: 474 --QGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLA 531
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD----------- 237
G + + G +G LGR Q+ + + + PGE+ K +ID+
Sbjct: 532 KSGKIYSWGYNGKGLLGR--QKGFEEHLPIEIGQI-PGELIGKIPNIDELIQRGDLKQEE 588
Query: 238 --------VFTGVYNTF-ISSKGSILAFGLNNYSQLGE---------------------- 266
V GV NT +++ G + FG N Y QL +
Sbjct: 589 TFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNS 648
Query: 267 --ADSEVQKSGNTCFFTPHLIKSLSDK--KFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
DS Q S LIK + + +A G H A++ +++ +GR+D G+
Sbjct: 649 QALDSSEQMS---------LIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQ 699
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LGL VS+ EPT I + K I IACG+ S A+ + G L+ G +LG G+
Sbjct: 700 LGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQA- 758
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID--- 439
+G + +F T I +L I S+ACG AI
Sbjct: 759 ---LKKGFLLSF--------------------TLIQNL--APIKSVACGPNHMLAIADYN 793
Query: 440 -----SEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+G+ Y WG QLG G ++D P KI
Sbjct: 794 PDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKI 828
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 189/478 (39%), Gaps = 86/478 (17%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-----I 125
+ +V G H + +TED ++++WG GALG D F P+ + + KK I
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDI-FEPRHLIIEKKDYTYFIEGI 349
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK-----IASG 180
+ G HS+ L + WG G G G G + L + + + K I++G
Sbjct: 350 ACGKYHSMCLTRKKKILTWG-----QGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAG 404
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVF 239
H ++ + NL T G G+LG S + P + L + I V
Sbjct: 405 ESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKK----------PKLIEDLDQYEIIHVS 454
Query: 240 TGVYNTF-ISSKGSILAFGLNNYSQLG----EADSEVQKSGNTCFFT----PHLIKSLSD 290
G ++T I+ +G++ AFG Y +LG + + + F+ P +
Sbjct: 455 CGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDK 514
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE----------PVTEPTPIPS 340
+ + A+G +HSL L GKIY++G + G LG + E P IP+
Sbjct: 515 NEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPN 574
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYG 400
+ D+ I +F+ E + G+ N L NG G++Y FG + YG
Sbjct: 575 I-DELIQRGDLKQEETFSY--EVIQVACGVLNTVSLTNG---------GEVYVFGSNAYG 622
Query: 401 RLGLK------------------------NVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
+L + SE ++ P I IACG F
Sbjct: 623 QLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMS-LIKFPGETTVRINYIACGGEHIF 681
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDIL-EPMKIEGKQLNNYTVLQVASGGQHSVILA 493
AI L+GWG + QLG G D EP I +Q+ + + +A G +S ++
Sbjct: 682 AISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLI--RQIAHKNIQMIACGDNYSAAVS 737
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 27/164 (16%)
Query: 332 VTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK 390
V+ PT I K IT +ACG+ AI + L+ WG G LG G DDI E +
Sbjct: 276 VSRPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIF--EPR 333
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
+ DY I IACG S + + + WG G
Sbjct: 334 HLIIEKKDYTYF----------------------IEGIACGKYHSMCLTRKKKILTWGQG 371
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G +LG+G EDD+L P +I L+ + +++G HS +++
Sbjct: 372 QGGRLGHGDEDDVLVPKEI--YDLSKKKPIFISAGESHSAAISE 413
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 31/318 (9%)
Query: 43 GQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGA 100
G+ D GQLGLG D T N+ + G ++ ++ G+++ G + G
Sbjct: 693 GRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGK 752
Query: 101 LGREAEGDSEFIPQTV---NL-PKKAVQISAGDSHSVAL--------LEDGTVYAWGSFR 148
LG F+ NL P K+V + G +H +A+ ++DG Y+WG R
Sbjct: 753 LGLGQALKKGFLLSFTLIQNLAPIKSV--ACGPNHMLAIADYNPDHPIKDGMCYSWG--R 808
Query: 149 DSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+ G +G+ + P K+ + K+A G D + LT + G + +I
Sbjct: 809 NWKGQLGIGSKEDSNVPKKIHNAKERFKKVACGQDFSIGLTYGNQVYLWGNNKYFCDSKI 868
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
T+ + + + LE ++ D + + + ++ KG IL +G ++ +
Sbjct: 869 TK---DVDIPQLLQALEQAQIK------DIACSYKFCSVLNDKGEILIWGSYLTDRIKQN 919
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL-- 325
+ +KS N T ++ D +++GQ+HS A++ + +Y +G + GRLGL
Sbjct: 920 QKKDKKSQNHLAITKFPMRKF-DFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLGLNE 978
Query: 326 KNVSEPVTEPTPIPSLQD 343
K EP + S+ D
Sbjct: 979 KEYKNAKIEPILVQSIHD 996
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 50/333 (15%)
Query: 74 VVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQ-ISAGDSH 131
+ GG H ++ +++ WG NDEG LG D P + + K +Q I+ GD++
Sbjct: 673 IACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNY 732
Query: 132 SVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLK----LESVSGIVKIASGADHFVML 187
S A+ G ++ G+ + G +GL G+ ++K L +++++ I +A G +H + +
Sbjct: 733 SAAVSAFGELFVTGNLEN--GKLGL-GQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAI 789
Query: 188 TSR--------GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G + G +GQLG + E VP K + + F
Sbjct: 790 ADYNPDHPIKDGMCYSWGRNWKGQLG--------------IGSKEDSNVPKKIHNAKERF 835
Query: 240 TGV-----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
V ++ ++ + +G N Y DS++ K + P L+++L +
Sbjct: 836 KKVACGQDFSIGLTYGNQVYLWGNNKYF----CDSKITKDVDI----PQLLQALEQAQIK 887
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP----TPIPSLQ-DKTITSI 349
+A LN +G+I +G + R+ + ++ T P + D + +I
Sbjct: 888 DIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETI 947
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKE 381
+ G S A+ + LY WG G +LG N KE
Sbjct: 948 SAGQNHSAAVSVKRSLYTWGHAEGGRLGLNEKE 980
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 27/269 (10%)
Query: 37 GVVLTCGQGDTGQLGLGPDVME--RKTFALVEDLDNVVEVVVGGMHTVCLTE-------- 86
G + G + G+LGLG + + +F L+++L + V G H + + +
Sbjct: 740 GELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIK 799
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
DG Y+WG N +G LG ++ DS + N ++ +++ G S+ L VY WG+
Sbjct: 800 DGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFKKVACGQDFSIGLTYGNQVYLWGN 859
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ S K I + LE I IA +L +G +L G R
Sbjct: 860 NKYFCDSKITKDVDIPQLLQALEQAQ-IKDIACSYKFCSVLNDKGEILIWGSY---LTDR 915
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-----YNTFISSKGSILAFGLNNY 261
I Q + ++ + L + P+++ D + + ++ +S K S+ +G
Sbjct: 916 IKQN--QKKDKKSQNHLAITKFPMRK--FDFLMETISAGQNHSAAVSVKRSLYTWGHAEG 971
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+LG + E + + P L++S+ D
Sbjct: 972 GRLGLNEKEYKNAK----IEPILVQSIHD 996
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 411 VTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP--M 467
V+ PT I K IT +ACG+ AI + L+ WG G LG G DDI EP +
Sbjct: 276 VSRPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHL 335
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAKPK 496
IE K Y + +A G HS+ L + K
Sbjct: 336 IIEKKDY-TYFIEGIACGKYHSMCLTRKK 363
>gi|270002180|gb|EEZ98627.1| hypothetical protein TcasGA2_TC001150 [Tribolium castaneum]
Length = 766
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 29/304 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGD 129
+++ +G H++ +T D V+TWG ND G LG F +L +K ++ +AG
Sbjct: 309 IIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGINNTQKQTFATIVKSLQHEKIIRCAAGR 368
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVML 187
+ S+ L +G V++ G + G +G ++P +E++ I KI+ G +H V L
Sbjct: 369 NFSLFLNAEGVVFSCGDAQ--QGCLGHGNWDSVQSPTIIEALMHEKIAKISCGDEHVVAL 426
Query: 188 TSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT- 245
++ G + T G + GQLG+ Q S A + ++ + I D+F G T
Sbjct: 427 STEGRVFTWGSSKNGQLGQGHMQYRCSPLAIKLLNLTK----------IKDIFCGENETV 476
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G +L GLNNY +LG AD E FTP I+ +K ++ G +H++
Sbjct: 477 LLTINGQVLVSGLNNYRKLGVADQE-----KIYLFTPVPIR----EKIKFVSIGLNHTMM 527
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L G + A GR+ G+LG N + P P IT IACG + A D+ V+
Sbjct: 528 LTENGVLIALGRNSEGQLGKGNF---INYPQPQTIKLRNKITMIACGLNFTVAADNRNVV 584
Query: 366 YGWG 369
+ WG
Sbjct: 585 WFWG 588
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 35/287 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA-LVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V T G+ D GQLG+ +++TFA +V+ L + ++ G ++ L +G V++ G
Sbjct: 328 VHTWGENDFGQLGINN--TQKQTFATIVKSLQHEKIIRCAAGRNFSLFLNAEGVVFSCGD 385
Query: 96 NDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
+G LG DS P + + +K +IS GD H VAL +G V+ WGS ++ G
Sbjct: 386 AQQGCLGH-GNWDSVQSPTIIEALMHEKIAKISCGDEHVVALSTEGRVFTWGSSKN--GQ 442
Query: 154 MGLKGEGIQKTPL--KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + +PL KL +++ I I G + V+LT G +L +G +LG Q
Sbjct: 443 LGQGHMQYRCSPLAIKLLNLTKIKDIFCGENETVLLTINGQVLVSGLNNYRKLGVADQEK 502
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
+ P VP++ K I V G+ +T ++ G ++A G N+ QLG+
Sbjct: 503 --------IYLFTP--VPIREK-IKFVSIGLNHTMMLTENGVLIALGRNSEGQLGK---- 547
Query: 271 VQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
GN + P IK + K TM+A G + ++A ++ ++ +G
Sbjct: 548 ----GNFINYPQPQTIKLRN--KITMIACGLNFTVAADNRNVVWFWG 588
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
+ L K + G HS+ + + ++ +G +D+G+LG+ N ++ T T + SLQ +
Sbjct: 302 QELPHKTIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGINN-TQKQTFATIVKSLQHEK 360
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
I A G S +++EGV++ G LG+G D
Sbjct: 361 IIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHGNWDS---------------------- 398
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
V PT I +L + I I+CG+ A+ +EG ++ WG QLG G
Sbjct: 399 -----VQSPTIIEALMHEKIAKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCS 453
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVIL 492
P+ I K LN + + G +V+L
Sbjct: 454 PLAI--KLLNLTKIKDIFCGENETVLL 478
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 138/366 (37%), Gaps = 98/366 (26%)
Query: 108 DSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL 166
D + IPQ LP K + S G SHS+ + D V+ WG + G +G+ Q
Sbjct: 296 DQQIIPQ--ELPHKTIIDFSIGYSHSIVVTIDHCVHTWG--ENDFGQLGINNTQKQ---- 347
Query: 167 KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG 226
+ + IVK Q +I + +A RN
Sbjct: 348 ---TFATIVK------------------------SLQHEKIIRCAAGRN----------- 369
Query: 227 EVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
++ F++++G + + G LG + + +S P +I+
Sbjct: 370 ----------------FSLFLNAEGVVFSCGDAQQGCLGHGNWDSVQS-------PTIIE 406
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+L +K ++ G H +AL++EG+++ +G G+LG ++ + P I L I
Sbjct: 407 ALMHEKIAKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCS-PLAIKLLNLTKI 465
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI---------------------- 384
I CG + + G + G+ N +LG ++ I
Sbjct: 466 KDIFCGENETVLLTINGQVLVSGLNNYRKLGVADQEKIYLFTPVPIREKIKFVSIGLNHT 525
Query: 385 --LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L G + A GR+ G+LG N + P P IT IACG + A D+
Sbjct: 526 MMLTENGVLIALGRNSEGQLGKGNF---INYPQPQTIKLRNKITMIACGLNFTVAADNRN 582
Query: 443 VLYGWG 448
V++ WG
Sbjct: 583 VVWFWG 588
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 37 GVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GVV +CG G LG G D ++ T + + ++ G H V L+ +G+V+TWG
Sbjct: 378 GVVFSCGDAQQGCLGHGNWDSVQSPTIIEALMHEKIAKISCGDEHVVALSTEGRVFTWGS 437
Query: 96 NDEGALGREAEGDSEF--IPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+ G LG +G ++ P + L K I G++ +V L +G V G +++
Sbjct: 438 SKNGQLG---QGHMQYRCSPLAIKLLNLTKIKDIFCGENETVLLTINGQVLVSG--LNNY 492
Query: 152 GSMGLKG-EGIQK-TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G+ E I TP+ + V I G +H +MLT G L+ G +GQLG+
Sbjct: 493 RKLGVADQEKIYLFTPVPIREKIKFVSI--GLNHTMMLTENGVLIALGRNSEGQLGK 547
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G VL G + +LG+ D + F V + + V +G HT+ LTE+G +
Sbjct: 479 TINGQVLVSGLNNYRKLGVA-DQEKIYLFTPVPIREKIKFVSIGLNHTMMLTENGVLIAL 537
Query: 94 GCNDEGALGREAEGDSEFI----PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G N EG LG+ FI PQT+ L K I+ G + +VA V+ WGS
Sbjct: 538 GRNSEGQLGK-----GNFINYPQPQTIKLRNKITMIACGLNFTVAADNRNVVWFWGSSYK 592
Query: 150 SHGSM 154
++ +M
Sbjct: 593 TYKNM 597
>gi|408501216|ref|YP_006865135.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466040|gb|AFU71569.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1086
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 164/365 (44%), Gaps = 44/365 (12%)
Query: 58 ERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN 117
+RKT+ + V+V GG H++ L DG Y WG N +G LG + G P V
Sbjct: 609 DRKTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVQGQLG-DGTGTGRNTPVRVK 667
Query: 118 LPKKA-----------VQISAGDSHSVALLEDGTVYAWGSFRDSHGSM-GLKGEGIQKTP 165
P + VQ+SAG HS+AL DG YAWG + +G + G ++TP
Sbjct: 668 TPDRKTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWG--YNVNGQLGGGTSNDYRRTP 725
Query: 166 LKLESVS-----------GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL--GRITQRSA 212
+++E+ V++++G H + L S GN G +GQL G T R+
Sbjct: 726 VRVETPDRKTYPDLPADFTYVQVSAGRYHSLALGSDGNAWAWGSNFEGQLGDGTGTNRNT 785
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
+ P ++P ++ +++ + S G+ A+G N QLG+ S
Sbjct: 786 PVMVKTPDRSTYP-DLPADFTYVQVSAGWLHSLALGSDGNAWAWGRNTNGQLGDGTSGTD 844
Query: 273 KSGNTCFFTP--HLIKSL-SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
++ P + L D + +++ HSLA+ S+G +A+G + YG LG N +
Sbjct: 845 RTAPVRVKMPDRNTYPDLPKDFTYAQVSAEGDHSLAVGSDGNAWAWGCNFYGPLG-NNTT 903
Query: 330 EPVTEPTPIP-------SLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
+ P+P + DK+ T ++ G S A+ S+G Y WG + QLG+
Sbjct: 904 NWQGDANPVPKRVRDSANPTDKSKGQQATQVSGGYHYSLALGSDGNAYAWGYNSSGQLGD 963
Query: 379 GKEDD 383
G +D
Sbjct: 964 GTTND 968
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 182/441 (41%), Gaps = 88/441 (19%)
Query: 81 TVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA-----------VQISAGD 129
++ + DG Y WG N G LG + P V +P + VQ+SAG
Sbjct: 571 SLAVGSDGNAYAWGYNYNGQLG-DGTSTERHAPVMVWMPDRKTYPDLPADFTYVQVSAGG 629
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESVS-----------GIV 175
HS+AL DG YAWG + G G+G + TP+++++ V
Sbjct: 630 QHSLALGSDGNAYAWG-----YNVQGQLGDGTGTGRNTPVRVKTPDRKTYPDLPADFTYV 684
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
++++G H + L S GN G GQLG T R R E P ++ +
Sbjct: 685 QVSAGGQHSLALGSDGNAYAWGYNVNGQLGGGTSNDYRRTPVR-------VETPDRKTYP 737
Query: 236 D--------DVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
D V G Y++ + S G+ A+G N QLG+ T TP ++K
Sbjct: 738 DLPADFTYVQVSAGRYHSLALGSDGNAWAWGSNFEGQLGDGTG-------TNRNTPVMVK 790
Query: 287 S---------LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
+ +D + +++G HSLAL S+G +A+GR+ G+LG T P
Sbjct: 791 TPDRSTYPDLPADFTYVQVSAGWLHSLALGSDGNAWAWGRNTNGQLGDGTSGTDRTAPVR 850
Query: 338 I--------PSL-QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
+ P L +D T ++ S A+ S+G + WG LGN + N +
Sbjct: 851 VKMPDRNTYPDLPKDFTYAQVSAEGDHSLAVGSDGNAWAWGCNFYGPLGN----NTTNWQ 906
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
G + +++ + P + + + T ++ G S A+ S+G Y WG
Sbjct: 907 GDANPVPKR------VRDSANPTDK------SKGQQATQVSGGYHYSLALGSDGNAYAWG 954
Query: 449 MGNGYQLGNGKEDDILEPMKI 469
+ QLG+G +D P+ +
Sbjct: 955 YNSSGQLGDGTTNDKSVPVPV 975
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 148/365 (40%), Gaps = 84/365 (23%)
Query: 198 CPEQG-QLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-----ISSK 250
P++G QLGR T + +A RG+ F + + G+ + + + S
Sbjct: 531 SPDRGSQLGREPTTITPPDSASRGIRFSQ-------------ISGGINSNYGFSLAVGSD 577
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH---LIKSLSDKKFTMLASGQHHSLALN 307
G+ A+G N QLG+ S ++ + P +D + +++G HSLAL
Sbjct: 578 GNAYAWGYNYNGQLGDGTS-TERHAPVMVWMPDRKTYPDLPADFTYVQVSAGGQHSLALG 636
Query: 308 SEGKIYAFGRHDYGRLGL---KNVSEPVTEPTP----IPSL-QDKTITSIACGNCVSFAI 359
S+G YA+G + G+LG + PV TP P L D T ++ G S A+
Sbjct: 637 SDGNAYAWGYNVQGQLGDGTGTGRNTPVRVKTPDRKTYPDLPADFTYVQVSAGGQHSLAL 696
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDI----------------------------------- 384
S+G Y WG QLG G +D
Sbjct: 697 GSDGNAYAWGYNVNGQLGGGTSNDYRRTPVRVETPDRKTYPDLPADFTYVQVSAGRYHSL 756
Query: 385 -LNSEGKIYAFGRHDYGRLGL---KNVSEPVTEPTP----IPSL-QDKTITSIACGNCVS 435
L S+G +A+G + G+LG N + PV TP P L D T ++ G S
Sbjct: 757 ALGSDGNAWAWGSNFEGQLGDGTGTNRNTPVMVKTPDRSTYPDLPADFTYVQVSAGWLHS 816
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNY-------TVLQVASGGQ 487
A+ S+G + WG QLG+G D P++++ N Y T QV++ G
Sbjct: 817 LALGSDGNAWAWGRNTNGQLGDGTSGTDRTAPVRVKMPDRNTYPDLPKDFTYAQVSAEGD 876
Query: 488 HSVIL 492
HS+ +
Sbjct: 877 HSLAV 881
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 162/361 (44%), Gaps = 68/361 (18%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA------VQISAGDS 130
G HTV + DG ++TWG NDEG LG P +N+P K +AG
Sbjct: 27 GYSHTVAVRNDGTLWTWGNNDEGQLGNST-------PAAINIPTKMGTANNWKTAAAGWG 79
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT----PLKLESVSGIVKIASGADHFVM 186
H+VAL DGT++AWG +G +G G G T P ++ + + IA+G H V
Sbjct: 80 HTVALKTDGTLWAWG-----YGRLGQLGNGNYNTNFNLPQQIGTENDWQTIAAGHGHTVA 134
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
L + G L G GQLG T S RN P ++ + G+Y
Sbjct: 135 LKNDGTLWAWGNNFSGQLGNGT--SFDRNT--------PTKIGSDSNWLAISAGGLYTIA 184
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+ G++ A+G N Y LG+ + + P I + +D K +A+G H++A+
Sbjct: 185 LKKDGTLWAWGKNTYGTLGDGTTTNNR-------VPKQIGTDTDWK--TIAAGSDHTIAI 235
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++G ++ +G++ YG LG + + PT I + D S G + AI ++G L+
Sbjct: 236 KNDGSLWIWGKNTYGALGDNTTIDKIV-PTKIGT--DTDWKSAEGGVDYTVAIKTDGTLW 292
Query: 367 GWG------MGNG--------YQLGNGKEDDILN----------SEGKIYAFGRHDYGRL 402
WG GNG Q+G K +++ ++ ++++G + YG+L
Sbjct: 293 AWGYNADGVFGNGSKINSLIPVQIGTEKNWQMVSGGSVHTVAVKTDESLWSWGNNSYGQL 352
Query: 403 G 403
G
Sbjct: 353 G 353
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 158/369 (42%), Gaps = 64/369 (17%)
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFV 185
+AG SH+VA+ DGT++ WG + G +G P K+ + + A+G H V
Sbjct: 25 AAGYSHTVAVRNDGTLWTWG--NNDEGQLGNSTPAAINIPTKMGTANNWKTAAAGWGHTV 82
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
L + G L G GQLG N +F P ++ + +
Sbjct: 83 ALKTDGTLWAWGYGRLGQLG---------NGNYNTNFNLPQQIGTENDWQTIAAGHGHTV 133
Query: 246 FISSKGSILAFGLNNYS-QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+ + G++ A+G NN+S QLG S + TP I SD + +++G +++
Sbjct: 134 ALKNDGTLWAWG-NNFSGQLGNGTSFDRN-------TPTKIG--SDSNWLAISAGGLYTI 183
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL--QDKTITSIACGNCVSFAIDSE 362
AL +G ++A+G++ YG LG + T +P D +IA G+ + AI ++
Sbjct: 184 ALKKDGTLWAWGKNTYGTLG-----DGTTTNNRVPKQIGTDTDWKTIAAGSDHTIAIKND 238
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G L+ W G++ YG LG + + PT I + D
Sbjct: 239 GSLWIW--------------------------GKNTYGALGDNTTIDKIV-PTKIGT--D 269
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
S G + AI ++G L+ WG GNG + + L P++I G + N Q+
Sbjct: 270 TDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNGSKINSLIPVQI-GTEKN----WQM 324
Query: 483 ASGGQ-HSV 490
SGG H+V
Sbjct: 325 VSGGSVHTV 333
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 149/344 (43%), Gaps = 27/344 (7%)
Query: 37 GVVLTCGQGDTGQLGLG-PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
G + T G D GQLG P + T + +N G HTV L DG ++ WG
Sbjct: 38 GTLWTWGNNDEGQLGNSTPAAINIPT--KMGTANNWKTAAAGWGHTVALKTDGTLWAWGY 95
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
G LG + +PQ + I+AG H+VAL DGT++AWG + G +G
Sbjct: 96 GRLGQLGNGNYNTNFNLPQQIGTENDWQTIAAGHGHTVALKNDGTLWAWG--NNFSGQLG 153
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
+ TP K+ S S + I++G + + L G L G G LG T + +R
Sbjct: 154 NGTSFDRNTPTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGKNTYGTLGDGTTTN-NRV 212
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSG 275
++ + + + H I + GS+ +G N Y LG+ ++ + K
Sbjct: 213 PKQIGTDTDWKTIAAGSDHT---------IAIKNDGSLWIWGKNTYGALGD-NTTIDK-- 260
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P I + +D K G +++A+ ++G ++A+G + G G +
Sbjct: 261 ----IVPTKIGTDTDWK--SAEGGVDYTVAIKTDGTLWAWGYNADGVFG---NGSKINSL 311
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
P+ +K ++ G+ + A+ ++ L+ WG + QLG+G
Sbjct: 312 IPVQIGTEKNWQMVSGGSVHTVAVKTDESLWSWGNNSYGQLGDG 355
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 14/233 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G +GQLG G +R T + N + + GG++T+ L +DG ++ WG N
Sbjct: 139 GTLWAWGNNFSGQLGNGTS-FDRNTPTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGKN 197
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG ++ +P+ + I+AG H++A+ DG+++ WG ++++G++G
Sbjct: 198 TYGTLGDGTTTNNR-VPKQIGTDTDWKTIAAGSDHTIAIKNDGSLWIWG--KNTYGALGD 254
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ P K+ + + G D+ V + + G L G G G ++
Sbjct: 255 NTTIDKIVPTKIGTDTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNGSK------- 307
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
++ L P ++ ++ V+ + + S+ ++G N+Y QLG+ S
Sbjct: 308 ---INSLIPVQIGTEKNWQMVSGGSVHTVAVKTDESLWSWGNNSYGQLGDGTS 357
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
A+G H++A+ ++G ++ +G +D G+LG + + PT + + + + G+ V
Sbjct: 25 AAGYSHTVAVRNDGTLWTWGNNDEGQLG-NSTPAAINIPTKMGTANNWKTAAAGWGHTV- 82
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGK-------------EDD------------ILNSEGKI 391
A+ ++G L+ WG G QLGNG E+D L ++G +
Sbjct: 83 -ALKTDGTLWAWGYGRLGQLGNGNYNTNFNLPQQIGTENDWQTIAAGHGHTVALKNDGTL 141
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
+A+G + G+LG S PT I S D +I+ G + A+ +G L+ WG
Sbjct: 142 WAWGNNFSGQLG-NGTSFDRNTPTKIGS--DSNWLAISAGGLYTIALKKDGTLWAWGKNT 198
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
LG+G + P +I G + T +A+G H++ +
Sbjct: 199 YGTLGDGTTTNNRVPKQI-GTDTDWKT---IAAGSDHTIAI 235
>gi|379721973|ref|YP_005314104.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
gi|378570645|gb|AFC30955.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
Length = 337
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 33/325 (10%)
Query: 49 QLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD 108
QLG G +R + V++LD+V+ + GG + + DG + WG N G LG D
Sbjct: 10 QLGDGTKT-DRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYD 68
Query: 109 SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL 168
P V V + AG SHS+A+ DG+V+AWG +++G +G + TP+++
Sbjct: 69 -RLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWG--WNTYGQLGDGTTDSRSTPVQV 125
Query: 169 ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV 228
+++ +V +A+G+ H + + + G++ G GQLG T ++ V
Sbjct: 126 QALDSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTEST--------------V 171
Query: 229 PLKRKHIDDVFT-GVYNTFIS---SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
P++ + V + NTF S S G++ A+G N+ QLG SE S +P
Sbjct: 172 PVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLG---SETAASN-----SPSP 223
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
++ ++SG +SLAL ++G ++A+G + G+LG + + P+ +
Sbjct: 224 VQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTT---SSSAPVQVTRLG 280
Query: 345 TITSIACGNCVSFAIDSEGVLYGWG 369
++ S+A G A+ S G ++ WG
Sbjct: 281 SVVSVAAGPLHGLAVQSGGTVWDWG 305
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 22/287 (7%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G G GQLG G +R T V+ L +VV + G H++ + DG V+ WG N
Sbjct: 48 GTAWAWGSNLFGQLGDGT-TYDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWN 106
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG + DS P V V ++AG HS+A+ DG+V+AWG+ + G +G
Sbjct: 107 TYGQLG-DGTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADGSVWAWGA--NWSGQLGD 163
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
P+++ + +V +++G L S G + G + GQLG T S S +
Sbjct: 164 GTYTESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPS- 222
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
P +V Y+ + + G++ A+G N+ QLG +
Sbjct: 223 --------PVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTT------- 267
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
T P + L +A+G H LA+ S G ++ +G + YG+L
Sbjct: 268 TSSSAPVQVTRLG--SVVSVAAGPLHGLAVQSGGTVWDWGNNTYGQL 312
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 140/292 (47%), Gaps = 46/292 (15%)
Query: 229 PLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
P+ K++D V G + + S G+ A+G N + QLG+ + + TP
Sbjct: 22 PIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDR-------LTPVQ 74
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
++ L L +G HSLA+ ++G ++A+G + YG+LG ++ + P + +L
Sbjct: 75 VQGL--HSVVALEAGSSHSLAVKADGSVWAWGWNTYGQLG-DGTTDSRSTPVQVQAL--D 129
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------- 383
++ ++A G+ S A+ ++G ++ WG QLG+G +
Sbjct: 130 SVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGSVVSVSAGNT 189
Query: 384 ---ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L S+G ++A+G +D G+LG + + P+P+ + +I+ G+ S A+ +
Sbjct: 190 FSSALKSDGTVWAWGANDSGQLGSETAAS--NSPSPVQVTGMASAAAISSGSDYSLALKN 247
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
+G ++ WG + QLGNG P+++ +L +V+ VA+G H + +
Sbjct: 248 DGTVWAWGYNSSGQLGNGTTTSSSAPVQV--TRLG--SVVSVAAGPLHGLAV 295
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 140/323 (43%), Gaps = 50/323 (15%)
Query: 151 HGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
H +G + + +P+ ++++ ++ I++G + S G G GQLG T
Sbjct: 8 HAQLGDGTKTDRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTT- 66
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSE 270
L P +V + ++ + + GS+ A+G N Y QLG+ ++
Sbjct: 67 ---------YDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTD 117
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ TP +++L +A+G HSLA+ ++G ++A+G + G+LG +E
Sbjct: 118 SRS-------TPVQVQAL--DSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTE 168
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------- 383
T P + L ++ S++ GN S A+ S+G ++ WG + QLG+
Sbjct: 169 S-TVPVQVTGL--GSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQ 225
Query: 384 ------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 425
L ++G ++A+G + G+LG + + P+ + ++
Sbjct: 226 VTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTT---SSSAPVQVTRLGSV 282
Query: 426 TSIACGNCVSFAIDSEGVLYGWG 448
S+A G A+ S G ++ WG
Sbjct: 283 VSVAAGPLHGLAVQSGGTVWDWG 305
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN--------- 386
+PIP ++ I+ G SFA+ S+G + WG QLG+G D L
Sbjct: 21 SPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQGLHS 80
Query: 387 ---------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
++G ++A+G + YG+LG ++ + P + +L ++ ++A G
Sbjct: 81 VVALEAGSSHSLAVKADGSVWAWGWNTYGQLG-DGTTDSRSTPVQVQAL--DSVVAVAAG 137
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG 471
+ S A+ ++G ++ WG QLG+G + P+++ G
Sbjct: 138 SGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVTG 177
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 415 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL 474
+PIP ++ I+ G SFA+ S+G + WG QLG+G D L P++++G
Sbjct: 21 SPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQGL-- 78
Query: 475 NNYTVLQVASGGQHSVIL 492
++V+ + +G HS+ +
Sbjct: 79 --HSVVALEAGSSHSLAV 94
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 36/242 (14%)
Query: 282 PHLIKSLSDKKFTMLAS---GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P + +L DK+ +A+ G+H+ LAL + ++Y++G D GRLG + S EPT I
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHY-LALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLI 561
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL------------- 385
+L+ K I + CG S AI + G LY WG GN +LG+G +D L
Sbjct: 562 QALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHI 621
Query: 386 ---------------NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
S+GK+Y++G DYG+LG + S+ P I LQ+ I + C
Sbjct: 622 IKVACGSFYAHTLCITSQGKVYSWGDGDYGKLG-RGGSDGSKLPRLIEKLQNVKIVQVYC 680
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S A+ +G +Y WG G G++LG+ E+++ P +E L + V+ V+ G H +
Sbjct: 681 GAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVL 738
Query: 491 IL 492
L
Sbjct: 739 AL 740
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 140/304 (46%), Gaps = 51/304 (16%)
Query: 174 IVKIASGAD--HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PL 230
++KIA+ + H++ LT + + G + G+LG + EP + L
Sbjct: 515 VIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKE----------EPTLIQAL 564
Query: 231 KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
K K I DV G Y+ IS+ G++ +G NY +LG +E C TP +I +LS
Sbjct: 565 KGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAE------DCL-TPTMISALS 617
Query: 290 DKKFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 347
D+ +A G H+L + S+GK+Y++G DYG+LG + S+ P I LQ+ I
Sbjct: 618 DEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLG-RGGSDGSKLPRLIEKLQNVKIV 676
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+ CG S A+ +G +Y WG G G++LG+ E++
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEEN------------------------ 712
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
V P + L+D+ + ++ G A+ +G +YGWG Q+ + E + +P
Sbjct: 713 ---VRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPR 769
Query: 468 KIEG 471
IE
Sbjct: 770 LIEA 773
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 33/291 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSV 133
G H + LT+D +VY+WG D G LG GD+ + + K + + G ++S
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGH---GDTSTKEEPTLIQALKGKDIIDVECGGTYSA 580
Query: 134 ALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGA--DHFVMLTS 189
A+ +G +Y WG R ++G +G TP + ++S I+K+A G+ H + +TS
Sbjct: 581 AISANGALYTWG--RGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITS 638
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFIS 248
+G + + G + G+LGR + + +E L+ I V+ G ++ +S
Sbjct: 639 QGKVYSWGDGDYGKLGR-----GGSDGSKLPRLIE----KLQNVKIVQVYCGAQFSVALS 689
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
G + +G +LG E N F P +++ L D+K ++ G H LAL
Sbjct: 690 EDGHVYTWGKGEGWKLGHPTEE-----NVRF--PEMVEVLRDRKVVGVSLGVSHVLALTD 742
Query: 309 EGKIYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFA 358
+G++Y +G+++ ++ + SE V +P I +L+ + + + CG SFA
Sbjct: 743 QGEVYGWGKNENKQIC--DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFA 791
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGM--HTVCLTEDGK 89
+ G + T G+G+ G+LG G D + + + D +++++V G HT+C+T GK
Sbjct: 583 SANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSD-EHIIKVACGSFYAHTLCITSQGK 641
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
VY+WG D G LGR D +P+ + + K VQ+ G SVAL EDG VY WG
Sbjct: 642 VYSWGDGDYGKLGR-GGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWG-- 698
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
+ +G E + P +E + +V ++ G H + LT +G + G E Q+
Sbjct: 699 KGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 38/320 (11%)
Query: 1 MTHLLKKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERK 60
MT L K + K A +P K ++ T V + G GD G+LG G D ++
Sbjct: 507 MTALDDKEVIKIAAHPEGKHYLA---------LTKDYEVYSWGNGDGGRLGHG-DTSTKE 556
Query: 61 TFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL 118
L++ L ++++V GG ++ ++ +G +YTWG + G LG D P ++
Sbjct: 557 EPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC-LTPTMISA 615
Query: 119 --PKKAVQISAGD--SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG- 173
+ ++++ G +H++ + G VY+WG +G +G G K P +E +
Sbjct: 616 LSDEHIIKVACGSFYAHTLCITSQGKVYSWGD--GDYGKLGRGGSDGSKLPRLIEKLQNV 673
Query: 174 -IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR 232
IV++ GA V L+ G++ T G E +LG T+ N R F E EV L+
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTE----ENVR----FPEMVEV-LRD 724
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
+ + V GV + ++ +G + +G N Q+ ++ + P LI++L +
Sbjct: 725 RKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQ-------PRLIEALKGQ 777
Query: 292 KFTMLASGQHHSLALNSEGK 311
K + G S A + +
Sbjct: 778 KVVGVCCGPAQSFAWTDDNE 797
>gi|189234725|ref|XP_973452.2| PREDICTED: similar to nimA-like kinase CG10951-PA [Tribolium
castaneum]
Length = 715
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 29/304 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGD 129
+++ +G H++ +T D V+TWG ND G LG F +L +K ++ +AG
Sbjct: 309 IIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGINNTQKQTFATIVKSLQHEKIIRCAAGR 368
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADHFVML 187
+ S+ L +G V++ G + G +G ++P +E++ I KI+ G +H V L
Sbjct: 369 NFSLFLNAEGVVFSCGDAQ--QGCLGHGNWDSVQSPTIIEALMHEKIAKISCGDEHVVAL 426
Query: 188 TSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT- 245
++ G + T G + GQLG+ Q S A + ++ + I D+F G T
Sbjct: 427 STEGRVFTWGSSKNGQLGQGHMQYRCSPLAIKLLNLTK----------IKDIFCGENETV 476
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ G +L GLNNY +LG AD E FTP I+ +K ++ G +H++
Sbjct: 477 LLTINGQVLVSGLNNYRKLGVADQE-----KIYLFTPVPIR----EKIKFVSIGLNHTMM 527
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
L G + A GR+ G+LG N + P P IT IACG + A D+ V+
Sbjct: 528 LTENGVLIALGRNSEGQLGKGNF---INYPQPQTIKLRNKITMIACGLNFTVAADNRNVV 584
Query: 366 YGWG 369
+ WG
Sbjct: 585 WFWG 588
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 35/287 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA-LVEDL--DNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V T G+ D GQLG+ + +++TFA +V+ L + ++ G ++ L +G V++ G
Sbjct: 328 VHTWGENDFGQLGI--NNTQKQTFATIVKSLQHEKIIRCAAGRNFSLFLNAEGVVFSCGD 385
Query: 96 NDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGS 153
+G LG DS P + + +K +IS GD H VAL +G V+ WGS ++ G
Sbjct: 386 AQQGCLGH-GNWDSVQSPTIIEALMHEKIAKISCGDEHVVALSTEGRVFTWGSSKN--GQ 442
Query: 154 MGLKGEGIQKTPL--KLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+G + +PL KL +++ I I G + V+LT G +L +G +LG Q
Sbjct: 443 LGQGHMQYRCSPLAIKLLNLTKIKDIFCGENETVLLTINGQVLVSGLNNYRKLGVADQEK 502
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
+ P VP++ K I V G+ +T ++ G ++A G N+ QLG+
Sbjct: 503 --------IYLFTP--VPIREK-IKFVSIGLNHTMMLTENGVLIALGRNSEGQLGK---- 547
Query: 271 VQKSGNTCFF-TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
GN + P IK + K TM+A G + ++A ++ ++ +G
Sbjct: 548 ----GNFINYPQPQTIKLRN--KITMIACGLNFTVAADNRNVVWFWG 588
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 286 KSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
+ L K + G HS+ + + ++ +G +D+G+LG+ N ++ T T + SLQ +
Sbjct: 302 QELPHKTIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGINN-TQKQTFATIVKSLQHEK 360
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
I A G S +++EGV++ G LG+G D
Sbjct: 361 IIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHGNWDS---------------------- 398
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
V PT I +L + I I+CG+ A+ +EG ++ WG QLG G
Sbjct: 399 -----VQSPTIIEALMHEKIAKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCS 453
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILA 493
P+ I K LN + + G +V+L
Sbjct: 454 PLAI--KLLNLTKIKDIFCGENETVLLT 479
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 147/368 (39%), Gaps = 55/368 (14%)
Query: 105 AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT 164
A +++I T+ +PK A + A + E +Y +F D + Q+
Sbjct: 252 ARPSAKYIHDTI-VPKTAKKFEAQSAKISVSRERSILYKINNFGDDQQIIP------QEL 304
Query: 165 PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
P K I+ + G H +++T + T G + GQLG N + +F
Sbjct: 305 PHK-----TIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGI--------NNTQKQTFAT 351
Query: 225 PGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
+ K I ++ F++++G + + G LG + + +S P +
Sbjct: 352 IVKSLQHEKIIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHGNWDSVQS-------PTI 404
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
I++L +K ++ G H +AL++EG+++ +G G+LG ++ + P I L
Sbjct: 405 IEALMHEKIAKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCS-PLAIKLLNLT 463
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
I I CG + + G + G+ N +LG ++ I
Sbjct: 464 KIKDIFCGENETVLLTINGQVLVSGLNNYRKLGVADQEKIYLFTPVPIREKIKFVSIGLN 523
Query: 385 ----LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 440
L G + A GR+ G+LG N + P P IT IACG + A D+
Sbjct: 524 HTMMLTENGVLIALGRNSEGQLGKGNF---INYPQPQTIKLRNKITMIACGLNFTVAADN 580
Query: 441 EGVLYGWG 448
V++ WG
Sbjct: 581 RNVVWFWG 588
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 37 GVVLTCGQGDTGQLGLGP-DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GVV +CG G LG G D ++ T + + ++ G H V L+ +G+V+TWG
Sbjct: 378 GVVFSCGDAQQGCLGHGNWDSVQSPTIIEALMHEKIAKISCGDEHVVALSTEGRVFTWGS 437
Query: 96 NDEGALGREAEGDSEF--IPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+ G LG +G ++ P + L K I G++ +V L +G V G +++
Sbjct: 438 SKNGQLG---QGHMQYRCSPLAIKLLNLTKIKDIFCGENETVLLTINGQVLVSG--LNNY 492
Query: 152 GSMGLKGEG--IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+G+ + TP+ + V I G +H +MLT G L+ G +GQLG+
Sbjct: 493 RKLGVADQEKIYLFTPVPIREKIKFVSI--GLNHTMMLTENGVLIALGRNSEGQLGK 547
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
T G VL G + +LG+ D + F V + + V +G HT+ LTE+G +
Sbjct: 479 TINGQVLVSGLNNYRKLGVA-DQEKIYLFTPVPIREKIKFVSIGLNHTMMLTENGVLIAL 537
Query: 94 GCNDEGALGREAEGDSEFI----PQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G N EG LG+ FI PQT+ L K I+ G + +VA V+ WGS
Sbjct: 538 GRNSEGQLGK-----GNFINYPQPQTIKLRNKITMIACGLNFTVAADNRNVVWFWGSSYK 592
Query: 150 SHGSM 154
++ +M
Sbjct: 593 TYKNM 597
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 179/414 (43%), Gaps = 75/414 (18%)
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLK--LESVSGIVK 176
A ++ A S A GT AWG ++G G+G + TP+ L + + I
Sbjct: 43 AARVLAQSVPSAAAGTPGTGLAWG-----FNALGQLGDGTTTNRNTPVTVDLPADTTITA 97
Query: 177 IASGAD-HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KH 234
IA+G + H + +TS +L G GQLG T + +RN P V L
Sbjct: 98 IAAGVNGHSLAVTSASTMLAWGFNTWGQLGDGT--TTNRN--------TPVAVDLPTGTT 147
Query: 235 IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
I + G ++ ++S G++LA+GLN+ QLG+ + + TP + +
Sbjct: 148 ITAIAAGKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTNRN-------TPVAVDLPTGTTI 200
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIA 350
T +A+G HSLAL S G + A+G + +G+LG N + PVT P TIT++A
Sbjct: 201 TAIAAGNGHSLALTSAGTMLAWGENTWGQLGDGTTTNRNTPVTVDLP----TGTTITALA 256
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------- 383
G S A+ S G + WG QLG+G +
Sbjct: 257 GGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGHSL 316
Query: 384 ILNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCV--SFAI 438
S G + A+G + +G+LG N S PVT P TIT+IA G S A
Sbjct: 317 AATSTGTMLAWGLNSFGQLGDGTTSNRSTPVTVDLP----AGTTITAIAAGGGSGHSLAA 372
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
S G + WG QLG+G + P+ ++ T+ V +GG HS+ +
Sbjct: 373 TSTGTMLAWGANTLGQLGDGTTSNRSTPVTVDLPA--GTTITAVTAGGFHSLAI 424
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 153/339 (45%), Gaps = 37/339 (10%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL---DNVVEVVVGGMHTVCLTEDGKV 90
T +L G GQLG G R T V DL + + G H++ +T G +
Sbjct: 110 TSASTMLAWGFNTWGQLGDG-TTTNRNTPVAV-DLPTGTTITAIAAGKSHSLAVTSAGTM 167
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG N G LG + + P V+LP I+AG+ HS+AL GT+ AWG
Sbjct: 168 LAWGLNSAGQLG-DGTTTNRNTPVAVDLPTGTTITAIAAGNGHSLALTSAGTMLAWG--E 224
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
++ G +G + TP+ ++ +G I +A G H + +TS G +L G GQLG
Sbjct: 225 NTWGQLGDGTTTNRNTPVTVDLPTGTTITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGD 284
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLG 265
T + +RN + ++P G ++ +S G++LA+GLN++ QLG
Sbjct: 285 GT--TTNRNTPVAV------DLPTGTTITAIAGGGGGHSLAATSTGTMLAWGLNSFGQLG 336
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG--QHHSLALNSEGKIYAFGRHDYGRL 323
+ + + TP + + T +A+G HSLA S G + A+G + G+L
Sbjct: 337 DGTTSNRS-------TPVTVDLPAGTTITAIAAGGGSGHSLAATSTGTMLAWGANTLGQL 389
Query: 324 G---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
G N S PVT P TIT++ G S AI
Sbjct: 390 GDGTTSNRSTPVTVDLP----AGTTITAVTAGGFHSLAI 424
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 47/339 (13%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPDVMERKTFA 63
+Q PSQ + A+ + C T G V CG D QLG D+ ++
Sbjct: 26 EQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLG--HDLPTKRPLL 83
Query: 64 LVEDLDNVV-EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPK 120
+ E LD VV ++ G H++ L+E G+V +WG ND G LG+ + D +P+ V + K
Sbjct: 84 IPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSK 143
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESVSGI--V 175
VQI+ G++HS+AL G +Y+WGS + +G +G+ K P++L ++ GI
Sbjct: 144 TVVQIACGNNHSLALTSCGELYSWGS--NIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVA 201
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR------RGMSFLEPGEVP 229
IA G +H +++ + G GQLG + S S + G+ F+ G+
Sbjct: 202 AIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGD-- 259
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS 289
++ F++++G + G Y QLG + P ++ L
Sbjct: 260 ------------EFSVFLTNEGGVFTCGAGAYGQLGHGFGANE-------MLPRMVMELM 300
Query: 290 DKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLGLKN 327
T +A G H+LAL S G++Y FG G+LG ++
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRS 339
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 143/306 (46%), Gaps = 45/306 (14%)
Query: 223 LEPGEVPLK-RKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
L P +VP I V G +T F++S G + A G N++SQLG D ++
Sbjct: 29 LTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLGH-DLPTKR------- 80
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS 340
P LI L D +A G HS+AL+ G++ ++G +D G+LG + V P +
Sbjct: 81 -PLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQ 139
Query: 341 LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG----------------------- 377
L KT+ IACGN S A+ S G LY WG QLG
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIP 199
Query: 378 ------NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
G I++ ++ +GR++ G+LGL N + PT + +L+ + +ACG
Sbjct: 200 VAAIACGGNHSFIISKSSAVFGWGRNNCGQLGL-NDETSRSYPTQLKTLRTLGVRFVACG 258
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ S + +EG ++ G G QLG+G +++L M +E L T+ QVA G +H++
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMVME---LMGSTITQVACGNRHTL 315
Query: 491 ILAKPK 496
L +
Sbjct: 316 ALVPSR 321
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 67/430 (15%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPKKAV-QISAGDSHSVALLEDGT 140
+T ++Y WG G LG D + + Q P A+ Q++ G H++ L G
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGC 198
VYA GS + H +G + K PL + + +V+IA G+ H + L+ G +L+ G
Sbjct: 61 VYACGS--NDHSQLG--HDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGD 116
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG+ T + + L L K + + G ++ ++S G + ++G
Sbjct: 117 NDCGQLGQATDQDIVQ--------LPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168
Query: 258 LNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
N Y QLG EV S P + +L +A G +HS ++ ++ +G
Sbjct: 169 SNIYGQLGVNTPKEVTHSNQ-----PVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWG 223
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 376
R++ G+LGL N + PT + +L+ + +ACG+ S + +EG ++ G G QL
Sbjct: 224 RNNCGQLGL-NDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 377 GNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 436
G+G FG ++ P + L TIT +ACGN +
Sbjct: 283 GHG--------------FGANE-------------MLPRMVMELMGSTITQVACGNRHTL 315
Query: 437 A-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN--------------NYTVLQ 481
A + S G +YG+G+G+ QLG + P + G ++ + + Q
Sbjct: 316 ALVPSRGRVYGFGLGSSGQLGTRSTKSLTLPQVVIGPWVSPSGSALLQSSDAKVSVVIHQ 375
Query: 482 VASGGQHSVI 491
+ SGG S +
Sbjct: 376 IFSGGDQSFV 385
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 311 KIYAFGRHDYGRLGLKNVS-EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
++Y +G +G+LGL + E + P+ +P D I +ACG+
Sbjct: 6 ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGH---------------- 49
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ L S G++YA G +D+ +LG P P IP L D + IA
Sbjct: 50 ----------RHTLFLTSSGRVYACGSNDHSQLGH---DLPTKRPLLIPELLDYVVVQIA 96
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ G + WG + QLG + DI++ KI +QL + TV+Q+A G HS
Sbjct: 97 CGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIV-RQLVSKTVVQIACGNNHS 155
Query: 490 VIL 492
+ L
Sbjct: 156 LAL 158
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 213/515 (41%), Gaps = 87/515 (16%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-NVVEVVVGGMHTVCLTED 87
++ C T G + T G G G+LGLG + + LD +VV V G H+ C+
Sbjct: 264 SMAC-TSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQ 322
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--------AVQISAGDSHSVALLEDG 139
G +YTWG G GR GD IP +P+K +Q++ G H++AL G
Sbjct: 323 GVLYTWG---SGGFGRLGHGDQGEIP----VPRKVEGFGGVPVLQVACGTFHTLALTHKG 375
Query: 140 TVYAWGS-FRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVMLTSRGNLLTAG 197
TV+AWG+ G G G+ P L + ++ +A+G H +T G+LL G
Sbjct: 376 TVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWG 435
Query: 198 CPEQGQLGRITQRS-------ASRNARRGMSFLEP--GEVPLKRKHIDDVFTGV------ 242
+LG Q++ A R ++ L+ G L+R + D G
Sbjct: 436 VGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAG 495
Query: 243 ----------------YNTFISSKGSILAFGLNNYSQLGEADS----EVQKSGNTCFFTP 282
+ ++ G++ +G N+ QLG + + + CF TP
Sbjct: 496 ANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTP 555
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 342
+A G H LA+ G ++A+G +D G+LGL V P EP + +L
Sbjct: 556 ----------IRRIACGSKHCLAVAQYGDVFAWGANDDGQLGL-GVLRPSFEPAAVTAL- 603
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRL 402
+ + CG+ S I S G + L +G E G ++ +G + G+L
Sbjct: 604 -RQAIDVFCGDDYSACITSNGGAQTVSLA----LESGTE------FGDLWTWGAAESGKL 652
Query: 403 GLKN--VSEPVTEPTPIPSLQDKTITSIAC--GNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
GL S + P +P ++ AC G + AI + G Y WG G +LG G
Sbjct: 653 GLGEDVASGSILTPQKVPF----SVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIG 708
Query: 459 KEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
+ P K + + + VA+G HS+ L+
Sbjct: 709 TTANAYAPTKCDFPK--GVRIRSVAAGASHSLALS 741
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 165/398 (41%), Gaps = 57/398 (14%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNLPKKAV-QISAGDSHSVA 134
G HTV LT G V+ WG NDEG LG E + ++ P ++ + +I+ G H +A
Sbjct: 509 GENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKHCLA 568
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLL 194
+ + G V+AWG+ D G +GL P + ++ + + G D+ +TS G
Sbjct: 569 VAQYGDVFAWGANDD--GQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQ 626
Query: 195 TAGCP-EQG-QLGRITQRSASRNARRGM-------SFLEPGEVPLKRKHIDDVFTGVYNT 245
T E G + G + A+ + + G+ S L P +VP +
Sbjct: 627 TVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCACSLGTSHAL 686
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
I+++G A+G Y +LG + + C F P ++ S +A+G HSLA
Sbjct: 687 AITARGECYAWGAGYYGRLGIGTTANAYAPTKCDF-PKGVRIRS------VAAGASHSLA 739
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEP-----VTEPTPIPSLQDKTITSIACGNCVSFAID 360
L+ +G ++ +G+ + N + P + P+ +P + SIA S A+
Sbjct: 740 LSMDGDLWIWGKKE-DTCSTTNYNSPRIFMQLESPSGVPK-----VKSIAAAEHHSLAVT 793
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G ++ WG YQ G GK +E + P I L
Sbjct: 794 ETGEVFAWGDNKLYQTGCGKRQ-------------------------AERLDRPEMIAGL 828
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
+ +A G SF + G +Y G+ NG +LG G
Sbjct: 829 PN-VCQWVATGPQASFFVLCSGEVYAAGVINGGRLGTG 865
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 165/384 (42%), Gaps = 60/384 (15%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-IVKIASGADH 183
+ G++H+VAL G V+ WGS + +G + E Q P+KL+ S I +IA G+ H
Sbjct: 506 LGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKH 565
Query: 184 FVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-V 242
+ + G++ G + GQLG R + EP V R+ I DVF G
Sbjct: 566 CLAVAQYGDVFAWGANDDGQLGLGVLRPS----------FEPAAVTALRQAI-DVFCGDD 614
Query: 243 YNTFISSKG--SILAFGLNNYSQLGE----ADSEVQKSG------NTCFFTPHLIKSLSD 290
Y+ I+S G ++ L + ++ G+ +E K G + TP K
Sbjct: 615 YSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQ--KVPFS 672
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ G H+LA+ + G+ YA+G YGRLG+ + PT + I S+A
Sbjct: 673 VPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYA-PTKCDFPKGVRIRSVA 731
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G S A+ +G L+ W GK++D ++ ++ R+ ++
Sbjct: 732 AGASHSLALSMDGDLWIW----------GKKEDTCSTTN-------YNSPRIFMQ----- 769
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE--DDILEPMK 468
+ P+ +P + SIA S A+ G ++ WG YQ G GK + + P
Sbjct: 770 LESPSGVPK-----VKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRPEM 824
Query: 469 IEGKQLNNYTVLQVASGGQHSVIL 492
I G L N VA+G Q S +
Sbjct: 825 IAG--LPN-VCQWVATGPQASFFV 845
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 206/550 (37%), Gaps = 115/550 (20%)
Query: 26 AVPTLKCKTGGGVVLTCGQGDTGQLGL----------------------GPDVMERKTFA 63
AV + + GG V T G G+ G+LG GP K
Sbjct: 115 AVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPAR 174
Query: 64 L-VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL---- 118
+ D + + G HT+ L++ G +Y WG G LG+ D+ + P V L
Sbjct: 175 VRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDA-YSPVRVLLGSEK 233
Query: 119 -----------------PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI 161
P +AG HS+A DGT++ WG HG G G G
Sbjct: 234 GSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWG-----HGGNGRLGLGH 288
Query: 162 QKTPLKLESVSGI-----VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ L V I V +++G H + +G L T G G+LG Q
Sbjct: 289 NRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQ------- 341
Query: 217 RRGMSFLEPGEVPLKRK-------HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
GE+P+ RK + V G ++T ++ KG++ A+G + L
Sbjct: 342 ---------GEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG----AGLALGL 388
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTML--ASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
E + G P K LSD + +L A+G +HS A+ G + +G RLG
Sbjct: 389 GEGEDGGGGMVTVP---KHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHG 445
Query: 327 NVSEPVTEPTP-----------IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY- 374
+ +P P + LQ S + F + E +
Sbjct: 446 DQQ---NQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWT 502
Query: 375 --QLGNGKEDDI-LNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKTITSIAC 430
LG G+ + L G ++ +G +D G+LGL + V E EP + I IAC
Sbjct: 503 LQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIAC 561
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQL-------NNYTVLQVA 483
G+ A+ G ++ WG + QLG G EP + + ++Y+ +
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITS 621
Query: 484 SGGQHSVILA 493
+GG +V LA
Sbjct: 622 NGGAQTVSLA 631
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 128/533 (24%), Positives = 211/533 (39%), Gaps = 108/533 (20%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTED-----GKVY 91
+L G+ LGLG + ER LV V EV G ++ L + GKVY
Sbjct: 70 LLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVY 129
Query: 92 TWGCNDEGALGR-------------------EAEGDSEFIPQTVNL----PKKAVQISAG 128
T+G + G LG + +G S F P+ + K +IS G
Sbjct: 130 TFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCG 189
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL----ESVSG----------- 173
H++AL + G +YAWG S+G++G +P+++ E SG
Sbjct: 190 ADHTLALSDGGALYAWGV--GSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRR 247
Query: 174 ------IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
+ A+GA H + TS G L T G G+LG R + L P
Sbjct: 248 GTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGS----------LSPAV 297
Query: 228 VP--LKRKHIDDVFTGV---YNTFISSKGSILAFGLNNYSQLGEADS-EVQKSGNTCFFT 281
V L R D VF ++ I +G + +G + +LG D E+
Sbjct: 298 VDYILDR---DVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP--------V 346
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR--HDYGRLGLKNVSEPVTEPTPIP 339
P ++ +A G H+LAL +G ++A+G G VT P +
Sbjct: 347 PRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLS 406
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ILNSEGKIYA 393
++ + ++A G S A+ G L WG+G +LG+G + + + + ++Y
Sbjct: 407 DIE-VAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV 465
Query: 394 FG----------RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
R DY + S + T+ S+ CG + A+ G
Sbjct: 466 ADLQSMLGVSRLRRDYSDFDVLGESAGGAGA----NAAAWTLQSLGCGENHTVALTGTGA 521
Query: 444 LYGWGMGNGYQLGNGK--EDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
++ WG + QLG G+ E+D EP+K++ + + ++A G +H + +A+
Sbjct: 522 VWVWGSNDEGQLGLGEQVEEDQYEPVKLD---CFSTPIRRIACGSKHCLAVAQ 571
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVM-------ERKTFALVEDLDNVVEVVVGGMHT 81
L+ T G + T G ++G+LGLG DV ++ F++ V +G H
Sbjct: 631 ALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSV-----PVCACSLGTSHA 685
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDG 139
+ +T G+ Y WG G LG ++ + P + PK + ++AG SHS+AL DG
Sbjct: 686 LAITARGECYAWGAGYYGRLGIGTTANA-YAPTKCDFPKGVRIRSVAAGASHSLALSMDG 744
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVK---IASGADHFVMLTSRGNLLTA 196
++ WG D+ + I ++LES SG+ K IA+ H + +T G +
Sbjct: 745 DLWIWGKKEDTCSTTNYNSPRIF---MQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAW 801
Query: 197 GCPEQGQLGRITQRSASRNARRGM 220
G + Q G +R A R R M
Sbjct: 802 GDNKLYQTG-CGKRQAERLDRPEM 824
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 166/436 (38%), Gaps = 76/436 (17%)
Query: 70 NVVEVVVGGMHTVCLTEDG---KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--AVQ 124
+V V +G HT+ + G ++ WG N LG E P V + +
Sbjct: 47 SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106
Query: 125 ISAGDSHSVALLED-----GTVYAWG-------SFRDSHGSMGLK------GEGIQKTP- 165
+S G ++S L++ G VY +G + S G + G+G + P
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166
Query: 166 --------LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
++ I +I+ GADH + L+ G L G G LG+ A R
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVR 226
Query: 218 RGM-----SFLEPGEVPLKRKHIDDVFT------GVYNTFISSKGSILAFGLNNYSQLGE 266
+ S + + + R+ D V ++ +S G++ +G +LG
Sbjct: 227 VLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
N +P ++ + D+ +++G HS ++ +G +Y +G +GRLG
Sbjct: 287 GH-------NRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHG 339
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
+ E + P + + +ACG + A+ +G ++ WG G LG G+
Sbjct: 340 DQGE-IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGE------ 392
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
VT P + ++ + ++A G S A+ G L
Sbjct: 393 ------------------DGGGGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVTVGGDLLV 433
Query: 447 WGMGNGYQLGNGKEDD 462
WG+G +LG+G + +
Sbjct: 434 WGVGGSSRLGHGDQQN 449
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEG---KIYAFGRHDYGRLGLKNVSEPVTEPTP 337
T + I L +A G +H+L + +G ++ A+G++ LGL + P
Sbjct: 36 TANRIARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGL 95
Query: 338 IPSLQDKTITSIACGN-----CVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
+P + ++CG V A S G +Y +G+GN +LG K +EG
Sbjct: 96 VPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKS----KAEG--- 148
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPS---LQDKT-ITSIACGNCVSFAIDSEGVLYGWG 448
G G + + TP P+ +DK I I+CG + A+ G LY WG
Sbjct: 149 --GARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWG 206
Query: 449 MGNGYQLGNGKEDDILEPMKI 469
+G+ LG G D P+++
Sbjct: 207 VGSYGNLGQGDTSDAYSPVRV 227
>gi|444918725|ref|ZP_21238787.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444709515|gb|ELW50526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 394
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 154/360 (42%), Gaps = 48/360 (13%)
Query: 22 VTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHT 81
V+S TL +T G V G+ D QLG V+ R V L V V G +
Sbjct: 64 VSSRGQHTLALRTDGSV-WAWGRNDAAQLG-DETVVNRSAPTRVAGLSGVQSVASGYFQS 121
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTV 141
+ L DG V+ WG + D + P + + ISAG HS+AL + G+V
Sbjct: 122 LALGGDGSVWAWGLTN--------SSDIQMTPAKLPELSDIIAISAGTFHSLALQQSGSV 173
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ WG D TP+ +E +SGI IA+G H + L G + G
Sbjct: 174 WFWGELLDQS----------SDTPVLVEGLSGITTIAAGNSHSLALDKSGVVWAWGDNTL 223
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV----FTGVYNTFISSKGSILAFG 257
GQLG TQ ++ P+K + + + G ++ + ++ + +G
Sbjct: 224 GQLGNGTQDEST--------------TPVKVQGLPTIKLIAAGGAHSLALDTENRVWTWG 269
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N+ QLG +GN I+ L+ K LA+G HSLAL ++G + A+G
Sbjct: 270 SNDEGQLG--------NGNKGGLRTLPIQVLNLKDVKQLAAGIRHSLALTNDGNVMAWGS 321
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
G+LG + P SL + + +I+ G+ S A+ S G L+ WG + QLG
Sbjct: 322 DSAGQLGDDLSLKEQLSPVETSSLTN--VIAISAGHSHSLALLSNGALFAWGSNSYGQLG 379
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 169/387 (43%), Gaps = 69/387 (17%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS 130
V +V G HT+ L DG V+ WG ND LG E + P V +++G
Sbjct: 61 VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLGDETVVNRS-APTRVAGLSGVQSVASGYF 119
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSR 190
S+AL DG+V+AWG S IQ TP KL +S I+ I++G H + L
Sbjct: 120 QSLALGGDGSVWAWGLTNSSD---------IQMTPAKLPELSDIIAISAGTFHSLALQQS 170
Query: 191 GNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISS 249
G++ G+L + Q S + G+S I + G ++ +
Sbjct: 171 GSVWF-----WGEL--LDQSSDTPVLVEGLS------------GITTIAAGNSHSLALDK 211
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + A+G N QLG + TP ++ L K ++A+G HSLAL++E
Sbjct: 212 SGVVWAWGDNTLGQLGNGTQDEST-------TPVKVQGLPTIK--LIAAGGAHSLALDTE 262
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
+++ +G +D G+LG N T P + +L+D + +A G S A+ ++G + WG
Sbjct: 263 NRVWTWGSNDEGQLGNGNKGGLRTLPIQVLNLKD--VKQLAAGIRHSLALTNDGNVMAWG 320
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ QLG DD L LK + +P+ + + +I+
Sbjct: 321 SDSAGQLG----DD------------------LSLKE------QLSPVETSSLTNVIAIS 352
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G+ S A+ S G L+ WG + QLG
Sbjct: 353 AGHSHSLALLSNGALFAWGSNSYGQLG 379
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 43 GQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
G G GL + T A + +L +++ + G H++ L + G V+ WG
Sbjct: 126 GDGSVWAWGLTNSSDIQMTPAKLPELSDIIAISAGTFHSLALQQSGSVWFWG-------- 177
Query: 103 REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
E S P V I+AG+SHS+AL + G V+AWG ++G G G Q
Sbjct: 178 -ELLDQSSDTPVLVEGLSGITTIAAGNSHSLALDKSGVVWAWGD-----NTLGQLGNGTQ 231
Query: 163 ---KTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
TP+K++ + I IA+G H + L + + T G ++GQLG N +G
Sbjct: 232 DESTTPVKVQGLPTIKLIAAGGAHSLALDTENRVWTWGSNDEGQLG---------NGNKG 282
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTC 278
P +V L K + + G+ ++ +++ G+++A+G ++ QLG+ S ++
Sbjct: 283 GLRTLPIQV-LNLKDVKQLAAGIRHSLALTNDGNVMAWGSDSAGQLGDDLSLKEQ----- 336
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+P SL++ +++G HSLAL S G ++A+G + YG+LG + P+ P
Sbjct: 337 -LSPVETSSLTN--VIAISAGHSHSLALLSNGALFAWGSNSYGQLGGSTPTMPIPLPVMF 393
Query: 339 P 339
P
Sbjct: 394 P 394
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
+ ++S H+LAL ++G ++A+GR+D +LG + V + PT + L + S+A G
Sbjct: 61 VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLGDETVVNR-SAPTRVAGLSG--VQSVASG 117
Query: 353 NCVSFAIDSEGVLYGWGMGNG--YQLGNGK----EDDILNSEGKIYAFGRHDYGRLGLKN 406
S A+ +G ++ WG+ N Q+ K D I S G ++ G +
Sbjct: 118 YFQSLALGGDGSVWAWGLTNSSDIQMTPAKLPELSDIIAISAGTFHSLALQQSGSVWFWG 177
Query: 407 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP 466
+ TP+ IT+IA GN S A+D GV++ WG QLGNG +D+ P
Sbjct: 178 ELLDQSSDTPVLVEGLSGITTIAAGNSHSLALDKSGVVWAWGDNTLGQLGNGTQDESTTP 237
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVIL 492
+K++G T+ +A+GG HS+ L
Sbjct: 238 VKVQGLP----TIKLIAAGGAHSLAL 259
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 154/353 (43%), Gaps = 86/353 (24%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLK 231
+ +++S H + L + G++ G + QLG + RSA G+S
Sbjct: 61 VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLGDETVVNRSAPTRVA-GLS---------- 109
Query: 232 RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSD 290
+ V +G + + + GS+ A+GL N S++Q TP + LSD
Sbjct: 110 --GVQSVASGYFQSLALGGDGSVWAWGLTN-------SSDIQ-------MTPAKLPELSD 153
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITS 348
+++G HSLAL G ++ +G E + + + P L + IT+
Sbjct: 154 --IIAISAGTFHSLALQQSGSVWFWG-------------ELLDQSSDTPVLVEGLSGITT 198
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------------------------I 384
IA GN S A+D GV++ WG QLGNG +D+
Sbjct: 199 IAAGNSHSLALDKSGVVWAWGDNTLGQLGNGTQDESTTPVKVQGLPTIKLIAAGGAHSLA 258
Query: 385 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 444
L++E +++ +G +D G+LG N T P + +L+D + +A G S A+ ++G +
Sbjct: 259 LDTENRVWTWGSNDEGQLGNGNKGGLRTLPIQVLNLKD--VKQLAAGIRHSLALTNDGNV 316
Query: 445 YGWGMGNGYQLGNGKEDDI-----LEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
WG + QLG DD+ L P +E L N V+ +++G HS+ L
Sbjct: 317 MAWGSDSAGQLG----DDLSLKEQLSP--VETSSLTN--VIAISAGHSHSLAL 361
>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
Length = 386
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 153/326 (46%), Gaps = 32/326 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V + G GQLG G V R A V L V + G +++ G+V WG N
Sbjct: 88 GTVQSWGGNAAGQLGDGSTV-GRSFPAAVTGLSGVSKTAAG-VNSAYAVRGGRVLAWGDN 145
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG G S P V K I+AG H++AL EDGTV+ WG R+ +G +GL
Sbjct: 146 TYGQLGNGTAGASPR-PVAVQSLNKVEDIAAGCFHAIALREDGTVWTWG--RNHYGQLGL 202
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP ++ ++ +V++++G H + T+ G + G GQLG + AS
Sbjct: 203 GTTTDRNTPQRVPDLTDVVEVSAGCHHSLARTADGTVKAWGYNASGQLGNGSTAHAS--- 259
Query: 217 RRGMSFLEPGEVPLKRKHIDDV---FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQ 272
P+ H+ DV F Y++F + G + A+G N+ LG+ S V
Sbjct: 260 -----------APVDVAHLADVSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDG-STVS 307
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
++ TP + L+D T LA G +H++A+ ++G + A+G + G+LG +
Sbjct: 308 RT------TPVPVPGLTD--VTALAGGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNSS 359
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFA 358
T T +P T +++ + S+A
Sbjct: 360 TPVTALPPGSGATRVAVSTVSRTSYA 385
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 166/389 (42%), Gaps = 62/389 (15%)
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ--ISAGDSHS----VALLEDG 139
D V WG N G LG + L + V+ + GDS + VALL DG
Sbjct: 29 RDPWVRAWGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDG 88
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCP 199
TV +WG ++ G +G + P + +SG+ K A+G + + G +L G
Sbjct: 89 TVQSWGG--NAAGQLGDGSTVGRSFPAAVTGLSGVSKTAAGVNSAYAVRG-GRVLAWGDN 145
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
GQLG T ++ R P V K ++D+ G ++ + G++ +G
Sbjct: 146 TYGQLGNGTAGASPR----------PVAVQSLNK-VEDIAAGCFHAIALREDGTVWTWGR 194
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH 318
N+Y QLG + + TP + L+D +++G HHSLA ++G + A+G +
Sbjct: 195 NHYGQLGLGTTTDRN-------TPQRVPDLTD--VVEVSAGCHHSLARTADGTVKAWGYN 245
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
G+LG + + + P + L D ++ I SFA+ +G L WG + LG+
Sbjct: 246 ASGQLGNGSTAH-ASAPVDVAHLAD--VSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGD 302
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
G VS T P P+P L D +T++A G + A+
Sbjct: 303 G-------------------------STVSR--TTPVPVPGLTD--VTALAGGYNHTVAV 333
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
++G + WG QLG+G + P+
Sbjct: 334 LADGSVLAWGENTLGQLGDGTTTNSSTPV 362
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 101/233 (43%), Gaps = 18/233 (7%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
GG VL G GQLG G + A V+ L+ V ++ G H + L EDG V+TWG
Sbjct: 136 GGRVLAWGDNTYGQLGNGTAGASPRPVA-VQSLNKVEDIAAGCFHAIALREDGTVWTWGR 194
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
N G LG D PQ V V++SAG HS+A DGTV AWG ++ G +G
Sbjct: 195 NHYGQLGLGTTTDRN-TPQRVPDLTDVVEVSAGCHHSLARTADGTVKAWG--YNASGQLG 251
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
P+ + ++ + +I + H + G L G G LG
Sbjct: 252 NGSTAHASAPVDVAHLADVSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLG---------- 301
Query: 216 ARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS--SKGSILAFGLNNYSQLGE 266
G + VP+ G YN ++ + GS+LA+G N QLG+
Sbjct: 302 --DGSTVSRTTPVPVPGLTDVTALAGGYNHTVAVLADGSVLAWGENTLGQLGD 352
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 145/363 (39%), Gaps = 65/363 (17%)
Query: 137 EDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV--SGIVKIASGADH-----FVMLTS 189
D V AWG + G +G Q+TP + + + + +A+G D V L +
Sbjct: 29 RDPWVRAWGG--NGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLN 86
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
G + + G GQLG + G SF P V + GV + +
Sbjct: 87 DGTVQSWGGNAAGQLGD--------GSTVGRSF--PAAV-TGLSGVSKTAAGVNSAYAVR 135
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G +LA+G N Y QLG T +P + S K +A+G H++AL +
Sbjct: 136 GGRVLAWGDNTYGQLGNG---------TAGASPRPVAVQSLNKVEDIAAGCFHAIALRED 186
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
G ++ +GR+ YG+LGL ++ T P +P L D S C + S A ++G + WG
Sbjct: 187 GTVWTWGRNHYGQLGLGTTTDRNT-PQRVPDLTDVVEVSAGCHH--SLARTADGTVKAWG 243
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
QLGNG + + P + L D ++ I
Sbjct: 244 YNASGQLGNGS---------------------------TAHASAPVDVAHLAD--VSRIF 274
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
SFA+ +G L WG + LG+G P+ + G L + T L A G H+
Sbjct: 275 AAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSRTTPVPVPG--LTDVTAL--AGGYNHT 330
Query: 490 VIL 492
V +
Sbjct: 331 VAV 333
>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1828
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 26/315 (8%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAG 128
+ V G +++ L DG VYTWG N +G LG G P QT N K ISAG
Sbjct: 837 IAVSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSEPVKAQTDN--AKITAISAG 894
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLT 188
++++AL DGTVY WG ++ G +G+ TP K+ ++S I I++G L
Sbjct: 895 RAYAMALASDGTVYTWGD--NTQGQLGIGNYDSHSTPTKVTALSNITAISAGFTSGTALD 952
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
S+G+ T G ++GQLG + R + L+ G+ P R +I + Y ++
Sbjct: 953 SQGHAWTWGQNDKGQLGNGAPNRSPTPTR--VQDLDTGQ-PDTRFYI--AISAGYQHVLA 1007
Query: 249 SKGSILAFGLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDK--KFTMLASGQHHSLA 305
+G + + +G D+ V K G+T S D+ T +++G S A
Sbjct: 1008 LDTDHDLYGWGSGTAIGSTTDTNVSKRGSTAI-------SFGDEPVNITAISAGDDGSEA 1060
Query: 306 LNSEGKIYAFGRHDYGRLG---LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
++ GKIY +G+ YG+LG N + + P I Q +++ + AI S+
Sbjct: 1061 IDDSGKIYTWGKEAYGQLGNGVYDNTAWQI-NPKTITLAQSVKACTVSTSSHHQTAIGSD 1119
Query: 363 GVLYGWGMGNGYQLG 377
G+LY WG QLG
Sbjct: 1120 GLLYTWGYSYYNQLG 1134
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 164/366 (44%), Gaps = 67/366 (18%)
Query: 115 TVNLPK----KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL-- 168
T+ PK + Q SAG H++A+ DG VYAWG+ + S G K G TP+++
Sbjct: 769 TLTPPKPRAVRFAQASAGRYHTLAVGSDGHVYAWGN-QASGGLGNSKNSGTATTPVRITE 827
Query: 169 -ESVSGIVKIA-SGADHFVM-LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
+++ G + IA S D + M L S G + T G +GQLG T S S EP
Sbjct: 828 NDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSS---------EP 878
Query: 226 GEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
+ I + G Y ++S G++ +G N QLG + + TP
Sbjct: 879 VKAQTDNAKITAISAGRAYAMALASDGTVYTWGDNTQGQLGIGNYDSHS-------TPTK 931
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD- 343
+ +LS+ T +++G AL+S+G + +G++D G+LG P PTP +QD
Sbjct: 932 VTALSN--ITAISAGFTSGTALDSQGHAWTWGQNDKGQLG---NGAPNRSPTPT-RVQDL 985
Query: 344 -------KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
+ +I+ G A+D++ LYGWG G +G+ + ++ +FG
Sbjct: 986 DTGQPDTRFYIAISAGYQHVLALDTDHDLYGWGSGTA--IGSTTDTNVSKRGSTAISFG- 1042
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
EPV IT+I+ G+ S AID G +Y WG QLG
Sbjct: 1043 -----------DEPVN------------ITAISAGDDGSEAIDDSGKIYTWGKEAYGQLG 1079
Query: 457 NGKEDD 462
NG D+
Sbjct: 1080 NGVYDN 1085
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 172/422 (40%), Gaps = 95/422 (22%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-----------K 120
+V G HT+ + DG VY WG N +G L GDS I + N P K
Sbjct: 221 AQVSAGHDHTLAVGSDGHVYAWGDNSKGEL-----GDSTTINK--NTPVRITENEAIKGK 273
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
+ +SAG + S+AL DGTVY WG +S G +G P+K + I I++G
Sbjct: 274 TFISVSAGTTFSMALASDGTVYTWGD--NSRGELGNGSTTNSSVPVKANLNATITAISAG 331
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF-LEPGEVPLKRKHIDDVF 239
H + L+S G + T G E GQLG N G++ P V +
Sbjct: 332 YWHAMALSSSGTIYTWGDNEYGQLG---------NGHTGVNVNASPAAVSSSGVTFTTIS 382
Query: 240 TGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK-----F 293
G + T + S+G A+G N QL + SG+ +TP I S +
Sbjct: 383 AGYDFQTALDSQGHAYAWGRNQGGQLSIGTMDGTSSGSNV-YTPSRIYGDSTGNPDSTVY 441
Query: 294 TMLASGQHHSLALNSEGKIYAFGR-------------HD-YGRLGLKNVSEPVTEPTPIP 339
T + +G H LAL++ GK+Y +G H Y L VS P TP+
Sbjct: 442 TDIDAGYLHVLALSNSGKVYYWGYPLTKGDDPNADSVHSFYPSL----VSLPTGAATPV- 496
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDY 399
S + G+ S +DS G LY +G + QLG+G
Sbjct: 497 --------SASAGDYSSAVVDSAGSLYMFGSNSSGQLGDG-------------------- 528
Query: 400 GRLGLKNVSEPVTEPTPIPSLQDKTITSI-ACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
++P + T + SL T+ + C + S AI S+G+ Y WG +LG G
Sbjct: 529 -------TTKPKSTMTEV-SLTGVTVAAFDVCRH--SLAIGSDGLPYSWGEAKSGKLGQG 578
Query: 459 KE 460
+
Sbjct: 579 SK 580
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 184/448 (41%), Gaps = 80/448 (17%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-----KKAVQIS 126
+ G HT+ + DG VY WG G LG + P + K + +S
Sbjct: 781 AQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVS 840
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT-PLKLESVSG-IVKIASGADHF 184
AGD++S+AL DGTVY WG + G +G G + P+K ++ + I I++G +
Sbjct: 841 AGDAYSMALASDGTVYTWG--NNGKGQLGNGTTGSYSSEPVKAQTDNAKITAISAGRAYA 898
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV------ 238
+ L S G + T G QGQL G+ + P K + ++
Sbjct: 899 MALASDGTVYTWGDNTQGQL--------------GIGNYDSHSTPTKVTALSNITAISAG 944
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLS----DKKFT 294
FT T + S+G +G N+ QLG TP ++ L D +F
Sbjct: 945 FTS--GTALDSQGHAWTWGQNDKGQLGNGAPNRSP-------TPTRVQDLDTGQPDTRFY 995
Query: 295 M-LASGQHHSLALNSEGKIYAFGR-HDYGRLGLKNVSEPVTEPTPIPSLQDK--TITSIA 350
+ +++G H LAL+++ +Y +G G NVS+ + S D+ IT+I+
Sbjct: 996 IAISAGYQHVLALDTDHDLYGWGSGTAIGSTTDTNVSK---RGSTAISFGDEPVNITAIS 1052
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G+ S AID G +Y WG QLGNG D N+ +I
Sbjct: 1053 AGDDGSEAIDDSGKIYTWGKEAYGQLGNGVYD---NTAWQI------------------- 1090
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P I Q +++ + AI S+G+LY WG QL G+ I P +
Sbjct: 1091 --NPKTITLAQSVKACTVSTSSHHQTAIGSDGLLYTWGYSYYNQL--GRTGAISVPGTTQ 1146
Query: 471 GKQLNNYTVLQVASGGQHSVILAKPKPN 498
Q+ T+++V G S KP N
Sbjct: 1147 SPQI---TLIKVVFGTMASST--KPATN 1169
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 168/387 (43%), Gaps = 68/387 (17%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS------GI 174
+ Q+S G +HS+A+ DG YAWG +S G +G + KTP++++ S
Sbjct: 1327 RFAQVSTGKNHSLAVGSDGNAYAWGD--NSTGQLGNGSKDSSKTPVQVKKPSDAGTDFAY 1384
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
++++G + L S GN G +GQLG + A G + P++ K
Sbjct: 1385 TQVSAGYGFSLALGSDGNAYAWGDNGRGQLG--------KGAAGGTN-----TTPVQVKK 1431
Query: 235 IDDVFTGVYNTFISSKG-SILAFGLNN--YSQLGEADSEVQKSGNTCFFTPHLI---KSL 288
T T +S+ G LA G ++ Y+ ++ GNT P + S
Sbjct: 1432 PSGAGTDFAYTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASA 1491
Query: 289 SDKKFTM--LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQD 343
+ F + +++G HSL + G+ YA+G D GRLG S PV+ +P+ +D
Sbjct: 1492 TSPGFQVRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPV-KYED 1550
Query: 344 KTI----TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------- 384
+I T ++ G S AI +G Y WG +LG G +D
Sbjct: 1551 GSIGFFATQVSAGGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDAAIPTLVANPDGGSDG 1610
Query: 385 ---------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
++ +GKIY +G + + LG ++S ++E +P+ +D + T I+
Sbjct: 1611 FKPTEISAGGWFCAGIDDKGKIYTWGSNGHNALGNVSISGSISE-SPVLVSKDGSTTQIS 1669
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG 456
G IDS + YGWG + QLG
Sbjct: 1670 AGERQVLVIDSNDMAYGWGDNSSRQLG 1696
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP---SLQDKTITS 348
+F ++G++H+LA+ S+G +YA+G G LG S T P I +++ K +
Sbjct: 779 RFAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIA 838
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNG------------KEDD------------- 383
++ G+ S A+ S+G +Y WG QLGNG + D+
Sbjct: 839 VSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSEPVKAQTDNAKITAISAGRAYA 898
Query: 384 -ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L S+G +Y +G + G+LG+ N T PT + +L + IT+I+ G A+DS+G
Sbjct: 899 MALASDGTVYTWGDNTQGQLGIGNYDSHST-PTKVTALSN--ITAISAGFTSGTALDSQG 955
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEG---KQLNNYTVLQVASGGQHSVIL 492
+ WG + QLGNG + P +++ Q + + +++G QH + L
Sbjct: 956 HAWTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQHVLAL 1008
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 51/372 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-----VVEVVVGGMHTVCLTEDGKVY 91
G G TGQLG G + + + D +V G ++ L DG Y
Sbjct: 1345 GNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFAYTQVSAGYGFSLALGSDGNAY 1404
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKA------VQISAGDSHSVALLEDGTVYAWG 145
WG N G LG+ A G + P V P A Q+SAG HS+A+ +D YAWG
Sbjct: 1405 AWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQVSAGGYHSLAVGKDHQAYAWG 1464
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTAGCP 199
R + G +G G P+ + + + + ++++G H +++ G G
Sbjct: 1465 D-RSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGYG 1523
Query: 200 EQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGS------- 252
+ G+LG NA+ + P+K +D G + T +S+ GS
Sbjct: 1524 DSGRLG--------NNAKSSQATPVSVSSPVK---YEDGSIGFFATQVSAGGSHSLAIGR 1572
Query: 253 ---ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL---SDK-KFTMLASGQHHSLA 305
A+G N +LG D+ P L+ + SD K T +++G
Sbjct: 1573 DGKAYAWGANTDGRLGTGDTNDAA-------IPTLVANPDGGSDGFKPTEISAGGWFCAG 1625
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL 365
++ +GKIY +G + + LG ++S ++E +P+ +D + T I+ G IDS +
Sbjct: 1626 IDDKGKIYTWGSNGHNALGNVSISGSISE-SPVLVSKDGSTTQISAGERQVLVIDSNDMA 1684
Query: 366 YGWGMGNGYQLG 377
YGWG + QLG
Sbjct: 1685 YGWGDNSSRQLG 1696
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-----PSLQDKTI 346
+F +++G H+LA+ S+G +YA+G + G LG S + + TP+ +++ KT
Sbjct: 219 RFAQVSAGHDHTLAVGSDGHVYAWGDNSKGELG---DSTTINKNTPVRITENEAIKGKTF 275
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------------- 383
S++ G S A+ S+G +Y WG + +LGNG +
Sbjct: 276 ISVSAGTTFSMALASDGTVYTWGDNSRGELGNGSTTNSSVPVKANLNATITAISAGYWHA 335
Query: 384 -ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
L+S G IY +G ++YG+LG + V S T T+I+ G A+DS+G
Sbjct: 336 MALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQG 395
Query: 443 VLYGWGMGNGYQLGNGKED------DILEPMKIEGKQLNN 476
Y WG G QL G D ++ P +I G N
Sbjct: 396 HAYAWGRNQGGQLSIGTMDGTSSGSNVYTPSRIYGDSTGN 435
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 157/374 (41%), Gaps = 31/374 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDL----DNVVEVVVGGMHTVCLTEDGKVYT 92
G V G G+LG + + + E+ + V G ++ L DG VYT
Sbjct: 237 GHVYAWGDNSKGELGDSTTINKNTPVRITENEAIKGKTFISVSAGTTFSMALASDGTVYT 296
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
WG N G LG + +S +P NL ISAG H++AL GT+Y WG
Sbjct: 297 WGDNSRGELGNGSTTNSS-VPVKANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQL 355
Query: 153 SMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
G G + +P + S SG+ I++G D L S+G+ G + GQL T
Sbjct: 356 GNGHTGVNVNASPAAVSS-SGVTFTTISAGYDFQTALDSQGHAYAWGRNQGGQLSIGTMD 414
Query: 211 SASRNARRGMSFLEPGEV-------PLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQ 263
S G + P + P + D ++ +S+ G + +G
Sbjct: 415 GTS----SGSNVYTPSRIYGDSTGNPDSTVYTDIDAGYLHVLALSNSGKVYYWGY----P 466
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS-GQHHSLALNSEGKIYAFGRHDYGR 322
L + D S ++ F P L+ + + AS G + S ++S G +Y FG + G+
Sbjct: 467 LTKGDDPNADSVHS--FYPSLVSLPTGAATPVSASAGDYSSAVVDSAGSLYMFGSNSSGQ 524
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSI-ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
LG ++P + T + SL T+ + C + S AI S+G+ Y WG +LG G +
Sbjct: 525 LG-DGTTKPKSTMTEV-SLTGVTVAAFDVCRH--SLAIGSDGLPYSWGEAKSGKLGQGSK 580
Query: 382 DDILNSEGKIYAFG 395
S+ K A G
Sbjct: 581 GPQSGSQTKPAAVG 594
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 54/269 (20%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK----KFTMLASGQHH 302
+ S G+ A+G N+ QLG + K TP +K SD +T +++G
Sbjct: 1341 VGSDGNAYAWGDNSTGQLGNGSKDSSK-------TPVQVKKPSDAGTDFAYTQVSAGYGF 1393
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNV----SEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
SLAL S+G YA+G + G+LG + PV P + D T ++ G S A
Sbjct: 1394 SLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQVSAGGYHSLA 1453
Query: 359 IDSEGVLYGWG-MGNGYQLGNG------------------------------KEDDILNS 387
+ + Y WG NG Q+G+G + I+
Sbjct: 1454 VGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAGYQHSLIIGI 1513
Query: 388 EGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKTI----TSIACGNCVSFAIDS 440
G+ YA+G D GRLG S PV+ +P+ +D +I T ++ G S AI
Sbjct: 1514 SGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPV-KYEDGSIGFFATQVSAGGSHSLAIGR 1572
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+G Y WG +LG G +D P +
Sbjct: 1573 DGKAYAWGANTDGRLGTGDTNDAAIPTLV 1601
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 81/353 (22%)
Query: 158 GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR 217
G I TP K V ++++G DH + + S G++ G +G+LG T + + R
Sbjct: 205 GSAITLTPPKPRGVR-FAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTPVR 263
Query: 218 RGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGN 276
+ E +K K V G ++ ++S G++ +G N+ +LG +
Sbjct: 264 -----ITENEA-IKGKTFISVSAGTTFSMALASDGTVYTWGDNSRGELGNGST------- 310
Query: 277 TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
T P +K+ + T +++G H++AL+S G IY +G ++YG+LG + V
Sbjct: 311 TNSSVP--VKANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASP 368
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-------------- 382
S T T+I+ G A+DS+G Y WG G QL G D
Sbjct: 369 AAVSSSGVTFTTISAGYDFQTALDSQGHAYAWGRNQGGQLSIGTMDGTSSGSNVYTPSRI 428
Query: 383 --------------DI---------LNSEGKIYAFGR-------------HD-YGRLGLK 405
DI L++ GK+Y +G H Y L
Sbjct: 429 YGDSTGNPDSTVYTDIDAGYLHVLALSNSGKVYYWGYPLTKGDDPNADSVHSFYPSL--- 485
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 458
VS P TP+ S + G+ S +DS G LY +G + QLG+G
Sbjct: 486 -VSLPTGAATPV---------SASAGDYSSAVVDSAGSLYMFGSNSSGQLGDG 528
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 181/491 (36%), Gaps = 94/491 (19%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPK--KAVQI 125
N+ + G + + + GK+YTWG G LG ++ + P+T+ L + KA +
Sbjct: 1047 NITAISAGDDGSEAIDDSGKIYTWGKEAYGQLGNGVYDNTAWQINPKTITLAQSVKACTV 1106
Query: 126 SAGDSHSVALLEDGTVYAWG-SFRDSHGSMG-LKGEGIQKTP--LKLESVSGIVKIASGA 181
S H A+ DG +Y WG S+ + G G + G ++P ++ V G +AS
Sbjct: 1107 STSSHHQTAIGSDGLLYTWGYSYYNQLGRTGAISVPGTTQSPQITLIKVVFGT--MASST 1164
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
LT GN + +A + +F+ P P +T
Sbjct: 1165 KPATNLTQTGN-------------------DTWDANQDWTFVTP-AYPYGPSSFTITWTI 1204
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTP------HLIKSLSDKKFTM 295
+T S + + + + D E G +T L+ + K
Sbjct: 1205 ADDTGDSRQRQQFDYTFDRTKKRITLDPE---GGTGAAWTSKDIEEGELVPRQTLTKTDF 1261
Query: 296 LASGQHHSLALNSEGKIYAFGRH--------DYGRLGLKNVSEPVTEP---------TPI 338
L G A S Y FG+ + L + +P P TP
Sbjct: 1262 LFDGWFVKAADGSSNVAYDFGKPVTEPLTLVAHWTLSTQMTVDPTVSPSTGGYQVTITP- 1320
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------- 383
PS + ++ G S A+ S+G Y WG + QLGNG +D
Sbjct: 1321 PSQRGIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGT 1380
Query: 384 ---------------ILNSEGKIYAFGRHDYGRLGLKNV----SEPVTEPTPIPSLQDKT 424
L S+G YA+G + G+LG + PV P + D
Sbjct: 1381 DFAYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFA 1440
Query: 425 ITSIACGNCVSFAIDSEGVLYGWG-MGNGYQLGNGKED-DILEPMKIEGKQLN-NYTVLQ 481
T ++ G S A+ + Y WG NG Q+G+G + P+ + + + V Q
Sbjct: 1441 YTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQ 1500
Query: 482 VASGGQHSVIL 492
V++G QHS+I+
Sbjct: 1501 VSAGYQHSLII 1511
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 131/341 (38%), Gaps = 80/341 (23%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
++++G +H + + S GN G GQLG ++ S+ + P++ K
Sbjct: 1328 FAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSS--------------KTPVQVK 1373
Query: 234 HIDDVFTGVYNTFIS----------SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
D T T +S S G+ A+G N QLG+ +G T TP
Sbjct: 1374 KPSDAGTDFAYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKG-----AAGGTNT-TPV 1427
Query: 284 LIKSLS----DKKFTMLASGQHHSLALNSEGKIYAFG-RHDYGRLGLKNVSEPVTEPTPI 338
+K S D +T +++G +HSLA+ + + YA+G R + G++G N + P +
Sbjct: 1428 QVKKPSGAGTDFAYTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAV 1487
Query: 339 ------PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
P Q + ++ G S I G Y WG G+ +LGN
Sbjct: 1488 NASATSPGFQ---VRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSS 1544
Query: 379 -------------------GKEDDILNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTP 416
G + +GK YA+G + GRLG + ++ P P
Sbjct: 1545 PVKYEDGSIGFFATQVSAGGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDAAIPTLVANP 1604
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
T I+ G ID +G +Y WG LGN
Sbjct: 1605 DGGSDGFKPTEISAGGWFCAGIDDKGKIYTWGSNGHNALGN 1645
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V T G GQLG+G + T V L N+ + G L G +TWG N
Sbjct: 905 GTVYTWGDNTQGQLGIG-NYDSHSTPTKVTALSNITAISAGFTSGTALDSQGHAWTWGQN 963
Query: 97 DEGALGREAEGDSEFIPQTVNL------PKKAVQISAGDSHSVALLEDGTVYAWGSFRD- 149
D+G LG A S + +L + + ISAG H +AL D +Y WGS
Sbjct: 964 DKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQHVLALDTDHDLYGWGSGTAI 1023
Query: 150 -SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR-I 207
S + G E V+ I I++G D + G + T G GQLG +
Sbjct: 1024 GSTTDTNVSKRGSTAISFGDEPVN-ITAISAGDDGSEAIDDSGKIYTWGKEAYGQLGNGV 1082
Query: 208 TQRSASRNARRGMSFLEPGEVPLKR--KHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
+A + + P + L + K + + T I S G + +G + Y+QLG
Sbjct: 1083 YDNTAWQ--------INPKTITLAQSVKACTVSTSSHHQTAIGSDGLLYTWGYSYYNQLG 1134
Query: 266 E 266
Sbjct: 1135 R 1135
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 172/421 (40%), Gaps = 66/421 (15%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGS 146
+ WG ND G LG DS P V+LP ++ GD H +AL GTV AWG
Sbjct: 55 TILAWGENDGGQLGNGTMIDSSE-PVAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWG- 112
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
R+ G +G TP+ + +G V +A+GADH + LTS G +L G GQL
Sbjct: 113 -RNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQL 171
Query: 205 G------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG-SILAFG 257
G R T + S A ++ + G R H N ++S G ++L +G
Sbjct: 172 GDGSTTDRSTPVAVSLPAGTTVAAIAAG-----RDH---------NLVLTSTGPTLLTWG 217
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
N QLG+ + T TP + T +A G+ HSL L S+ A+G
Sbjct: 218 KNTRGQLGDGTT-------TGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGG 270
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ +G+LG ++ + P + T+IA G S A+ SEG + WG QLG
Sbjct: 271 NSFGQLGNGTTTDSLV-PIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLG 329
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC-VSF 436
NG D SEPV P D +T+IA + +
Sbjct: 330 NGSTTD-----------------------SSEPVAVSLP----ADTRLTAIAGRDSDHNV 362
Query: 437 AIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
I S G WG +LG+G D P+ + V +A+G S+ L
Sbjct: 363 TITSAGAALAWGANANGELGDGSTTDRSTPVAVSLPA--GTRVAAIAAGDDQSMALPTLP 420
Query: 497 P 497
P
Sbjct: 421 P 421
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 30 LKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGM-HTVCLTEDG 88
L + G +LT G+ GQLG G A+ V V GG H++ LT D
Sbjct: 204 LVLTSTGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDD 263
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGS 146
WG N G LG DS +P V LP +A I+AG HS AL +G +AWG
Sbjct: 264 TALAWGGNSFGQLGNGTTTDS-LVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWG- 321
Query: 147 FRDSHGSMGLKGEG-----IQKTPLKLESVSGIVKIA-SGADHFVMLTSRGNLLTAGCPE 200
H G G G + + L + + + IA +DH V +TS G L G
Sbjct: 322 ----HNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANA 377
Query: 201 QGQLG 205
G+LG
Sbjct: 378 NGELG 382
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAG 128
+ G +H+ LT +G + WG N G LG + DS P V+LP + I+
Sbjct: 298 ATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSE-PVAVSLPADTRLTAIAGR 356
Query: 129 DS-HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
DS H+V + G AWG+ +++G +G + TP+ + +G + IA+G D +
Sbjct: 357 DSDHNVTITSAGAALAWGA--NANGELGDGSTTDRSTPVAVSLPAGTRVAAIAAGDDQSM 414
Query: 186 ML 187
L
Sbjct: 415 AL 416
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 32/336 (9%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCL 84
TL T GVVLTCG +GQ G G +M R AL + G H + L
Sbjct: 365 TLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIAL 424
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLED-GTVY 142
T+ G Y+WG ND G LG E +P+ + +L K ++ ++ H A++ D G +Y
Sbjct: 425 TDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELY 484
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPE 200
A+G + G +GL Q TP ++ G I +A G H ++ T+ G L G +
Sbjct: 485 AFG--MNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKND 542
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLN 259
GQLG N + ++ L V L + + V +G Y++ +++ G +FG N
Sbjct: 543 YGQLG------LGHNRQIKVASL----VSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRN 592
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+Y QLG + Q P+++ ++ + G +H++ L+ +G+++ FGR++
Sbjct: 593 DYGQLGIGNKVHQN-------VPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNN 645
Query: 320 YGRLGLKNVSEPVTEPTPI---PSLQDKTITSIACG 352
G+LG + ++ + P P+ P + +A G
Sbjct: 646 KGQLGNRGSADALL-PVPLKVRPEKNSRRCVDVAAG 680
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 168/376 (44%), Gaps = 53/376 (14%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE--DLDNVVEVVVGGMHTVCLTEDG 88
KC+ G + +CGQ G+LG G D+ ER + D++ +V G LT DG
Sbjct: 316 KCE-ASGELYSCGQNSYGELGTGDDI-ERHQLTSISLCGWDDIRQVASGNETLAVLTNDG 373
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDGTVYAW 144
V T G N G G+ + + + V + K + S G H +AL + G Y+W
Sbjct: 374 VVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSW 433
Query: 145 GSFRDSHGSMGLKG-----------EGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNL 193
G + G +G + E ++ L+ SVS H ++T G L
Sbjct: 434 G--YNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVS--------YHHSAVITDSGEL 483
Query: 194 LTAGCPEQGQLG-RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSKG 251
G + GQLG TQ ++ +G E I V G+Y+T I ++ G
Sbjct: 484 YAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTE----------ISMVACGLYHTIICTATG 533
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
+ A G N+Y QLG + K + + SL ++ + +ASG +HS+ + + G+
Sbjct: 534 GLFACGKNDYGQLGLGHNRQIKVAS--------LVSLPNEMVSYVASGYYHSVVVTNSGR 585
Query: 312 IYAFGRHDYGRLGLKN-VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++FGR+DYG+LG+ N V + V P + + + CG + + +G ++ +G
Sbjct: 586 TFSFGRNDYGQLGIGNKVHQNV--PNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGR 643
Query: 371 GNGYQLGN-GKEDDIL 385
N QLGN G D +L
Sbjct: 644 NNKGQLGNRGSADALL 659
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 57/393 (14%)
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG---IVKIASGADHFVMLTSRGNLLT 195
G +Y+ G ++S+G +G G+ I++ L S+ G I ++ASG + +LT+ G +LT
Sbjct: 321 GELYSCG--QNSYGELG-TGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLT 377
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN-----TFISSK 250
G + GQ G+ R M L P + L+ + + F N ++
Sbjct: 378 CGLNKSGQCGQ------GHFDERVM-MLRPVQA-LRSQRVK--FIAASNGCEHMIALTDS 427
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G ++G N+ QLG ++ T P LI+SL DKK + HHS + G
Sbjct: 428 GLAYSWGYNDRGQLG------HENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSG 481
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++YAFG +D G+LGL + T P + + I+ +ACG + + G L+ G
Sbjct: 482 ELYAFGMNDCGQLGLDHTQHQST-PQLVKGFEGTEISMVACGLYHTIICTATGGLFACGK 540
Query: 371 GNGYQLGNGKEDDI-------------------------LNSEGKIYAFGRHDYGRLGLK 405
+ QLG G I + + G+ ++FGR+DYG+LG+
Sbjct: 541 NDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIG 600
Query: 406 N-VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 464
N V + V P + + + CG + + +G ++ +G N QLGN D L
Sbjct: 601 NKVHQNV--PNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADAL 658
Query: 465 EPMKIEGK-QLNNYTVLQVASGGQHSVILAKPK 496
P+ ++ + + N+ + VA+G + ++ + K
Sbjct: 659 LPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERK 691
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 169/343 (49%), Gaps = 40/343 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G +L+CGQ GQLG + + + +E +V+V G H+V + ++G +Y+WG
Sbjct: 53 GTLLSCGQNPYGQLGRKGNNSRIEQISSLEA-QTIVDVSCGTNHSVAMCDEGNIYSWGDG 111
Query: 97 DEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
EG LG F P+ + L +K +QIS G+ HSVAL EDG V++WG ++ G +
Sbjct: 112 SEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWG--QNKCGQL 169
Query: 155 GLKGEGI-QKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + I Q TP ++S+ GI V++ +G L+ G + G GQLG
Sbjct: 170 GLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLG------ 223
Query: 212 ASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTFISSK-GSILAFGLNNYSQLGEADS 269
+A++G +P V L+ + + G +T + +K G + FG + Y QLG
Sbjct: 224 FKNDAKKGT--FKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG---- 277
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA-LNSEGKIYAFGRHDYGRLGLKNV 328
Q+SGN P I+ S ++ + +A G++H+L + + +I +FG+ + G +
Sbjct: 278 --QQSGNQT-SVPQKIEEYS-RQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQG-NDE 332
Query: 329 SEPVTEPTPIPS------------LQDKTITSIACGNCVSFAI 359
S E + +PS L+D + I GN V FA+
Sbjct: 333 SSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNNVGFAV 375
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 174/376 (46%), Gaps = 40/376 (10%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA-VQISA 127
++V +V +G H++ L +DG + + G N G LGR +G++ I Q +L + V +S
Sbjct: 34 ESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGR--KGNNSRIEQISSLEAQTIVDVSC 91
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESV--SGIVKIASGADHF 184
G +HSVA+ ++G +Y+WG S G +G K TP ++ + I++I+ G H
Sbjct: 92 GTNHSVAMCDEGNIYSWGD--GSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHS 149
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
V L G + + G + GQLG +Q + S LK + V G
Sbjct: 150 VALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKS--------LKGIPLVQVTAGGSQ 201
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
TF +S G++ A+G NN QLG + K G F P+ + SL D ++ G+ H+
Sbjct: 202 TFALSMSGTVFAWGRNNAGQLGFKNDA--KKGT---FKPYAVDSLRDLGVAYISCGEEHT 256
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSE 362
LN +G +Y FG YG+LG ++ ++ + P I + ++ +ACG + + +
Sbjct: 257 AVLNKDGIVYTFGDDTYGQLGQQSGNQ-TSVPQKIEEY-SRQVSQVACGRYHTLLYVFTC 314
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
+ +G G+ Q GN + D + AF ++ P L+D
Sbjct: 315 NRIVSFGKGSQRQQGNDESSDQAEASQLPSAFD---------------ISSLVPANDLKD 359
Query: 423 KTITSIACGNCVSFAI 438
+ I GN V FA+
Sbjct: 360 VNVKWIFAGNNVGFAV 375
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 160/360 (44%), Gaps = 60/360 (16%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLK----LESVSGIVKIASGADHFVMLTSRGNLLTA 196
+Y WG + G + + E + K + + K++ G H + L G LL+
Sbjct: 1 MYCWGD--NCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSC 58
Query: 197 GCPEQGQLGRITQRSASRNAR-RGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSIL 254
G GQLGR N+R +S LE + I DV G ++ + +G+I
Sbjct: 59 GQNPYGQLGR-----KGNNSRIEQISSLEA-------QTIVDVSCGTNHSVAMCDEGNIY 106
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
++G + QLG + FTP I L ++K ++ G HS+AL +G++++
Sbjct: 107 SWGDGSEGQLGTGKFSSKN------FTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFS 160
Query: 315 FGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+G++ G+LGL S+ + + TP + SL+ + + G +FA+ G ++ WG N
Sbjct: 161 WGQNKCGQLGLG--SQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNN 218
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVT-EPTPIPSLQDKTITSIACG 431
G+LG KN ++ T +P + SL+D + I+CG
Sbjct: 219 A--------------------------GQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCG 252
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVI 491
+ ++ +G++Y +G QLG + P KIE + V QVA G H+++
Sbjct: 253 EEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEY---SRQVSQVACGRYHTLL 309
>gi|72390898|ref|XP_845743.1| regulator of chromosome condensation [Trypanosoma brucei TREU927]
gi|62175841|gb|AAX69968.1| regulator of chromosome condensation, putative [Trypanosoma brucei]
gi|70802279|gb|AAZ12184.1| regulator of chromosome condensation, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261329163|emb|CBH12142.1| regulator of chromosome condensation, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1152
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 185/455 (40%), Gaps = 59/455 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V + G G+LG G E K L++ L N V + G HT LT+ G+++
Sbjct: 568 TSSGAVYSWGVERNGRLGHGSGKNEEK-MRLIDALSNQVVTDASCGSFHTAVLTKQGQIF 626
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+G N G LG +P+ + LPK+A+ +S G H+ LLEDG V A GS R S
Sbjct: 627 VFGENTYGQLGLPTR-QPRLLPEILPLPKRAISVSCGREHTCILLEDGDVMACGSLRCSG 685
Query: 152 GSMGLKGEGIQKTPLKLESVSGIVKIASGADHFV---MLTSRGNLLTAGCPEQGQLGRIT 208
+G + P + I+ +ASG H + +L + + PE L +
Sbjct: 686 VGVGFGSRFV--APRRAVQNYLILTLASGDLHVLAAGLLRTMALTVVQTPPESPILDDLP 743
Query: 209 Q--RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ A R+ RG+S + FT ++ G + G QLG
Sbjct: 744 KVNEVARRHGLRGVS-------------AGNGFT----IILAETGEAFSIGQGENGQLGM 786
Query: 267 ADSEV-QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG- 324
D+ + QK+ P ++ + G + ++A+ S G +Y++G + +G+LG
Sbjct: 787 GDTSLSQKTALRKVVVPDF------EELCAVECGFNFAIAIGSSGALYSWGWNTHGQLGH 840
Query: 325 --LKNVSEPVTEPTPIPSLQD-KTITSIACGNCVSFAIDSEGVLYGW--------GMGNG 373
N+ E V P I +L+ + +ACG A+ G +Y W G G
Sbjct: 841 GVAVNLGEAVFTPKEISALKSLAQVVQVACGGTFVIALTQCGEVYSWGETLYCGHGTGGE 900
Query: 374 YQLGNGKEDDILNSEGKIYAFGRH-----------DYGRLGLKNVSEPVT-EPTPIPSLQ 421
L N K L + A RH +GR + + P T P P+
Sbjct: 901 RCLTNPKRIAALQDIAAVAAGDRHAAAVSYDHVIYAWGRGPVGDGGSPSTVVPVPVAVKF 960
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
+ + C +F I G LY WG+ N Q G
Sbjct: 961 AHPVRQLVCCQVNTFIITDVGDLYVWGLNNNGQCG 995
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 205/526 (38%), Gaps = 108/526 (20%)
Query: 39 VLTCGQGDTGQLGLG-------PDVME------RKTFALVEDLDNVVEVVVGGMHTVCL- 84
+L+CG D GQLG G P ++ R + D + ++ G V +
Sbjct: 393 ILSCGNDDWGQLGAGKSKDSQPPGAVKGSEGKYRLYRVPLRSGDQICKLAAGSAFAVAIG 452
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP---KKAVQISAGDSHSVALLEDGTV 141
++Y WG N G EG + P V++P + V ++ G ++ G+V
Sbjct: 453 LRSRRMYLWGQNSFGQC-LVHEGMTVRTPVLVDIPGQYTEVVDVACGGFYAALSFTCGSV 511
Query: 142 YAWG------------SFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIASGADHFVMLT 188
WG RD+ K KT + ++ +V + +G H + +T
Sbjct: 512 GTWGLSTMLATNVSPDQLRDADAPNNQK---CAKTINLFKPLNEKVVALRAGPCHCLAIT 568
Query: 189 SRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFIS 248
S G + + G G+LG + ++ + M ++ L + + D G ++T +
Sbjct: 569 SSGAVYSWGVERNGRLGHGSGKNEEK-----MRLID----ALSNQVVTDASCGSFHTAVL 619
Query: 249 SK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLA 305
+K G I FG N Y QLG + P L+ + K+ ++ G+ H+
Sbjct: 620 TKQGQIFVFGENTYGQLGLPTRQ-----------PRLLPEILPLPKRAISVSCGREHTCI 668
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA------- 358
L +G + A G +G+ S V P ++Q+ I ++A G+ A
Sbjct: 669 LLEDGDVMACGSLRCSGVGVGFGSRFV---APRRAVQNYLILTLASGDLHVLAAGLLRTM 725
Query: 359 ----------------------IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGR 396
+ L G GNG+ + IL G+ ++ G+
Sbjct: 726 ALTVVQTPPESPILDDLPKVNEVARRHGLRGVSAGNGFTI-------ILAETGEAFSIGQ 778
Query: 397 HDYGRLGLKNVS---EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 453
+ G+LG+ + S + +P ++ + ++ CG + AI S G LY WG
Sbjct: 779 GENGQLGMGDTSLSQKTALRKVVVPDFEE--LCAVECGFNFAIAIGSSGALYSWGWNTHG 836
Query: 454 QLGNGKE----DDILEPMKIEG-KQLNNYTVLQVASGGQHSVILAK 494
QLG+G + + P +I K L V+QVA GG + L +
Sbjct: 837 QLGHGVAVNLGEAVFTPKEISALKSLAQ--VVQVACGGTFVIALTQ 880
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 181/477 (37%), Gaps = 94/477 (19%)
Query: 55 DVMERKTFALVEDLDNVVEVVVGGMHTVCLT-----EDGKVYTWGCNDEGALGRE----- 104
D + T V D VE VV G L G V TWG G++
Sbjct: 290 DAIASPTPERVGDGGEAVEEVVAGEKPPDLLLSRYLAKGAVLTWGNIASVKTGKKLQLAS 349
Query: 105 -------AEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA-----WGSF----- 147
+G P + +P V S G + + + + WG
Sbjct: 350 PSDGESPPQGSYTLSPTRLAIPVPVVSFSCGAYSCYFVTMERKILSCGNDDWGQLGAGKS 409
Query: 148 RDSHGSMGLKG-EG---IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+DS +KG EG + + PL+ S I K+A+G+ V + R + Q
Sbjct: 410 KDSQPPGAVKGSEGKYRLYRVPLR--SGDQICKLAAGSAFAVAIGLRSRRMYLW--GQNS 465
Query: 204 LGRITQRSASRNARRGMSFLEPG--EVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNN 260
G+ GM+ P ++P + + DV G Y + GS+ +GL+
Sbjct: 466 FGQCL-------VHEGMTVRTPVLVDIPGQYTEVVDVACGGFYAALSFTCGSVGTWGLST 518
Query: 261 Y-------SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
QL +AD+ + C T +L K L ++K L +G H LA+ S G +Y
Sbjct: 519 MLATNVSPDQLRDADA---PNNQKCAKTINLFKPL-NEKVVALRAGPCHCLAITSSGAVY 574
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
++G GRLG + + I +L ++ +T +CG SF
Sbjct: 575 SWGVERNGRLG-HGSGKNEEKMRLIDALSNQVVTDASCG---SF---------------- 614
Query: 374 YQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL--QDKTITSIACG 431
+L +G+I+ FG + YG+LGL P +P +P + K S++CG
Sbjct: 615 -------HTAVLTKQGQIFVFGENTYGQLGL-----PTRQPRLLPEILPLPKRAISVSCG 662
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
+ + +G + G +G G + P + + NY +L +ASG H
Sbjct: 663 REHTCILLEDGDVMACGSLRCSGVGVGFGSRFVAPR----RAVQNYLILTLASGDLH 715
>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
Length = 911
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 192/459 (41%), Gaps = 57/459 (12%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G M+R+T + N V V G +T+ L DG +++WG N
Sbjct: 138 GELWGWGYNSNGQLGDGT-TMDRRTPVKIGIDINWVAVATGSSYTLALKADGTLWSWGKN 196
Query: 97 DEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL 156
G LG D P + + I+A S + + +GT++ WG ++ G +G+
Sbjct: 197 QRGQLGDGTTIDRHS-PVQIGTEQTWTGIAACFSSGIGIKANGTLWTWG--FNNGGELGI 253
Query: 157 KGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+ TP+++ + + +G++H V L G+L G E G++G
Sbjct: 254 GNNDEKHTPVQVGADQNWLYAVAGSNHIVALKVDGSLWGWGLNEAGEIGNGNTVQQDSPV 313
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
R G + G +T I S G++ A+G N LG + + +
Sbjct: 314 RVGTD-----------NDWTTLAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGTATLDPA- 361
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
P ++ +D + +++G HS+AL + G ++A+G + G+LG + ++ +
Sbjct: 362 ----TLP--VQVGTDADWIRVSAGLDHSVALKANGTLWAWGYNVRGQLGYGSGTD---KH 412
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI----------- 384
P+ T +I G + + ++G L+ WG QLG+G D
Sbjct: 413 LPVQIGTAHTWVAINAGTYHTIGVKADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD 472
Query: 385 --------------LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
L + G I+ +G + + G S PV + D+ SIA
Sbjct: 473 DWISIAASNAFSMGLKANGTIWTWGLNPFETDGQYKNSSPVQTGS------DQNWKSIAT 526
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
G+ A+ ++G L+ WG QLG+G E + P +I
Sbjct: 527 GSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLPKQI 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 193/458 (42%), Gaps = 64/458 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G + G GQLG G ++ + V + G HT+ + DG ++TWG N
Sbjct: 390 GTLWAWGYNVRGQLGYGSGT-DKHLPVQIGTAHTWVAINAGTYHTIGVKADGSLWTWGDN 448
Query: 97 DEGALGREAEGDSEFIPQTV-NLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
LG D + +P ++ P + I+A ++ S+ L +GT++ WG
Sbjct: 449 TNAQLGDGGTAD-QPVPHSIRTAPDDWISIAASNAFSMGLKANGTIWTWGL-----NPFE 502
Query: 156 LKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRN 215
G+ +P++ S IA+G+++ + L + G L G GQLG T++
Sbjct: 503 TDGQYKNSSPVQTGSDQNWKSIATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPR--- 559
Query: 216 ARRGMSFLEPGEVPLKRKHID-DVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKS 274
+ P ++ + +GV + I + GS+ ++G +NY D E+
Sbjct: 560 -------MLPKQIGTATTWVSIAAASGVQSFGIQADGSLWSWG-HNY------DGELGLG 605
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
N P + + +D + + +G H+L + S+G ++ +G + G+LG + V +
Sbjct: 606 TNLKTLVPTRVGTGTD--WISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDGTL---VNK 660
Query: 335 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAF 394
P+ D+ +IA G + + S G L+ W
Sbjct: 661 YVPVQLGTDRDWINIAGGTIHNICLKSNGTLWAW-------------------------- 694
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 454
GR++YG++G N+ +T+ + ++ + SFAI ++G L+ G+ + Q
Sbjct: 695 GRNNYGQVGTGNL---ITQDRMVQISAEQNWIDVYASLDQSFAIRADGSLWACGLNSSGQ 751
Query: 455 LGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVIL 492
LG+G D + + Q + +A+G H++ L
Sbjct: 752 LGDGTSVDRAAMVAVGTNQ----KWISLAAGNYHTLAL 785
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 39/203 (19%)
Query: 292 KFTMLASGQH--HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
+ +A+G + HS + S G+++ +G + G+LG + TP+ D ++
Sbjct: 119 NYQRMATGNNSDHSFEIRS-GELWGWGYNSNGQLGDGTTMD---RRTPVKIGIDINWVAV 174
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSE 409
A G+ + A+ ++G L+ WG QLG+G D RH
Sbjct: 175 ATGSSYTLALKADGTLWSWGKNQRGQLGDGTTID------------RH------------ 210
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+P+ ++T T IA I + G L+ WG NG +LG G D+ P+++
Sbjct: 211 -----SPVQIGTEQTWTGIAACFSSGIGIKANGTLWTWGFNNGGELGIGNNDEKHTPVQV 265
Query: 470 EGKQLNNYTVLQVASGGQHSVIL 492
Q L +G H V L
Sbjct: 266 GADQ----NWLYAVAGSNHIVAL 284
>gi|440492611|gb|ELQ75163.1| RCC1 domain protein [Trachipleistophora hominis]
Length = 356
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 159/360 (44%), Gaps = 51/360 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT---FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGC 95
V T G QLG G + T DL V + G +HT+ L E G VY++GC
Sbjct: 3 VYTFGSNLLSQLGTGDEPGSSSTPLELPAFTDL-KVDKACCGSLHTLILAE-GSVYSFGC 60
Query: 96 NDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
NDE ALGRE + E +P V LP++ I AG S S + G +Y WG+FRD G +G
Sbjct: 61 NDEFALGREGD---ENVPIRVQLPERITHIGAGQSASFCIGSSGKLYGWGTFRDKGGVIG 117
Query: 156 LK-GEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASR 214
K + QK P+ L + ++A G++H V+ RG + G E G+ G R
Sbjct: 118 FKPNKKFQKVPVVLHR-GPVRQLAVGSNH-VLYNVRGEVYAIGANEFGEKG------VHR 169
Query: 215 NARRGMSFLEPGEVPLKRKH-----IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
N R E G V + + +F G +F +S +G AFG N +QLG +
Sbjct: 170 NTRMARC-RELGAVLVANRRSMFSKCGRMFCGAGTSFMVSERGDAFAFGQNANAQLGLGN 228
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTM-----LASGQHHSLALNSEGKIYAFGRHDYGRL 323
+ +S +K + ++SG+ H+L + +YA G + +G+L
Sbjct: 229 TH---------------GGISKRKVPLDDVQSISSGELHTLFVTRNNALYAVGHNMFGQL 273
Query: 324 GL-KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
G N V +P+++ + S A +G +Y WG + + G +D
Sbjct: 274 GTGDNADRHVLTRIDLPNVRTASTKGF-----FSVAYTDDG-MYSWGFNSHGECGYAGQD 327
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 108/273 (39%), Gaps = 48/273 (17%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
+ FG N SQLG D S TP + + +D K G H+L L +EG +
Sbjct: 3 VYTFGSNLLSQLGTGDEPGSSS------TPLELPAFTDLKVDKACCGSLHTLIL-AEGSV 55
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM-- 370
Y+FG +D LG + E PI + IT I G SF I S G LYGWG
Sbjct: 56 YSFGCNDEFALGREG-----DENVPIRVQLPERITHIGAGQSASFCIGSSGKLYGWGTFR 110
Query: 371 -----------------------GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
G QL G + N G++YA G +++G G+
Sbjct: 111 DKGGVIGFKPNKKFQKVPVVLHRGPVRQLAVGSNHVLYNVRGEVYAIGANEFGEKGVHRN 170
Query: 408 SE--PVTEPTPIPSLQDKTITS----IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
+ E + +++ S + CG SF + G + +G QLG G
Sbjct: 171 TRMARCRELGAVLVANRRSMFSKCGRMFCGAGTSFMVSERGDAFAFGQNANAQLGLGNTH 230
Query: 462 DILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
+ K+ L++ V ++SG H++ + +
Sbjct: 231 GGISKRKVP---LDD--VQSISSGELHTLFVTR 258
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 31/357 (8%)
Query: 11 KQAENPSQKVFVTSEAVPTLKCK-------TGGGVVLTCGQGDTGQLGLGP-DVMERKTF 62
K AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 59 KFAENIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTC 118
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQT-VNLPKK 121
+ V G HT+ T+ G VY G N+EG LG D + Q P
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSD 178
Query: 122 AV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
+ Q+SAG + S AL EDG ++ WG +S G +GLK + P ++ I I+ G
Sbjct: 179 IIKQLSAGANTSAALTEDGKLFMWGD--NSEGQIGLKNKSNVCIPHEVTVGKPISWISCG 236
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-RNARRGMSFLEPGEVPLKRKHIDDVF 239
H +T+ G L T G PE G+LG Q + R+ +R + +P K + V
Sbjct: 237 YYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG------IPDK---VIQVA 287
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
G +T + ++ + AFGL + QLG + S P +I + D+K + ++ G
Sbjct: 288 CGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETS------EPKIIDRIKDQKISHISCG 341
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNC 354
++H+ + G +Y FG +G+LGL +N + PT + T+ IACG C
Sbjct: 342 ENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFF-PTLCSNFLKFTVQLIACGGC 397
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 58/391 (14%)
Query: 117 NLPKK-------AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
N+P K + +S GD H+ + + +Y +GS ++ G +GL + P ++
Sbjct: 63 NIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGS--NNWGQLGLGSKSAISKPTCIK 120
Query: 170 SVSG-IVKIAS-GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE 227
++ VK+A+ G +H ++ T G + AG +GQLG + R+ + F P +
Sbjct: 121 ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLG--LGDTDDRDTFHQIGFFTPSD 178
Query: 228 VPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
+ I + G + ++ G + +G N+ Q+G ++ N C PH +
Sbjct: 179 I------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIG-----LKNKSNVCI--PHEVT 225
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-VSEPVTEPTPIPSLQDKT 345
K + ++ G +HS + ++G++Y FG + G+LGL N + P + + DK
Sbjct: 226 --VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKV 283
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK 405
I +ACG + + +E V+Y +G+G +G+LGL
Sbjct: 284 I-QVACGGGHTVVL-TEKVVYAFGLG--------------------------QFGQLGLG 315
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+EP I ++D+ I+ I+CG + + G++Y +G G +LG G E+ +
Sbjct: 316 TFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQ 375
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+TV +A GG H ++ A P+
Sbjct: 376 FFPTLCSNFLKFTVQLIACGGCHMLVFATPR 406
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 31/322 (9%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL----PKKAVQ 124
D + + G HT +T + K+Y +G N+ G LG G I + + P+K
Sbjct: 73 DVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGL---GSKSAISKPTCIKALKPEKVKL 129
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVK-IASGA 181
+ G +H++ + G VYA G ++ G +GL + T + + S I+K +++GA
Sbjct: 130 AACGRNHTLVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGA 187
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
+ LT G L G +GQ+G + + P EV + K I + G
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIG----------LKNKSNVCIPHEVTVG-KPISWISCG 236
Query: 242 VYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y++ F+++ G + FG +LG + + +P + + DK +A G
Sbjct: 237 YYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHR-----SPQRVLGIPDK-VIQVACGG 290
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H++ L +E +YAFG +G+LGL +EP I ++D+ I+ I+CG + +
Sbjct: 291 GHTVVL-TEKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMT 349
Query: 361 SEGVLYGWGMGNGYQLGNGKED 382
G++Y +G G +LG G E+
Sbjct: 350 DIGLMYTFGDGRHGKLGLGMEN 371
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLT------CGQGDTGQLGLGPDVMERKTFALVEDLDN- 70
Q+V + V + C G VVLT G G GQLGLG + E +++ + +
Sbjct: 274 QRVLGIPDKVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQ 333
Query: 71 -VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEFIPQTV-NLPKKAVQ-IS 126
+ + G HT +T+ G +YT+G G LG E ++F P N K VQ I+
Sbjct: 334 KISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIA 393
Query: 127 AGDSHSVAL 135
G H +
Sbjct: 394 CGGCHMLVF 402
>gi|410940026|ref|ZP_11371847.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
noguchii str. 2006001870]
gi|410784889|gb|EKR73859.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
noguchii str. 2006001870]
Length = 505
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 174/390 (44%), Gaps = 54/390 (13%)
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDS--EFIPQTVNLPKKAVQISAGD 129
++ GG H+ L +GK+YT G N+ G LG + GD+ + I + V+L + I
Sbjct: 129 KLSAGGGHSGFLI-NGKLYTVGRNNFGQLGTGISTGDNINDRIVK-VDLIQDIFSIHFNQ 186
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE----------GIQKTPLKLESVSGIVKIAS 179
++S+A+ + G VY WG+ +S G +G+ G ++ P ++ + V A
Sbjct: 187 NNSMAISKSGRVYTWGA--NSKGQLGIGNNNTDPAKASDPGNRQPPTEINGIDNAVMGAY 244
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
G +H ++L S G ++ G GQLG + + N R P V R I +
Sbjct: 245 GFNHALVLKSDGTVVAFGQNNVGQLG-----NGANNLDRNSFSSIPVNVAQLRNVIQIIA 299
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
++ ++ G + +G N Y LG + NT TP ++ LS K +A+G
Sbjct: 300 GSEHSAALTENGDVYVWGRNQYGNLGNG---ITSPANTIQSTPLKVEGLS--KIKQIANG 354
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 359
+ H LAL S+GKIY++G + G+LG+ P+ P P L + SI G SFAI
Sbjct: 355 RDHILALTSDGKIYSWGLNASGQLGIGGNGNPLPTPIPTQVLNIQDAESIWAGGTQSFAI 414
Query: 360 DSEGVLYGWGM-GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
G + GWG GN L G+ + K+Y + +G+ NV
Sbjct: 415 LKNGEVKGWGANGNMASLALGESN-----TPKVY---EPNKAVVGIDNV----------- 455
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWG 448
CG +FA+ G +YGWG
Sbjct: 456 -------VHFGCGATHNFALLGNGEIYGWG 478
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 155/358 (43%), Gaps = 52/358 (14%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL---KGEGIQKTPLKLESVSGIVKIASG 180
++SAG HS L +G +Y G R++ G +G G+ I +K++ + I I
Sbjct: 129 KLSAGGGHS-GFLINGKLYTVG--RNNFGQLGTGISTGDNINDRIVKVDLIQDIFSIHFN 185
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPG--EVPLKRKHIDDV 238
++ + ++ G + T G +GQLG + A +PG + P + ID+
Sbjct: 186 QNNSMAISKSGRVYTWGANSKGQLGIGNNNTDPAKAS------DPGNRQPPTEINGIDNA 239
Query: 239 FTGVYN----TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT 294
G Y + S G+++AFG NN QLG + + ++ F+ + +
Sbjct: 240 VMGAYGFNHALVLKSDGTVVAFGQNNVGQLGNGANNLDRNS----FSSIPVNVAQLRNVI 295
Query: 295 MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+ +G HS AL G +Y +GR+ YG LG ++ P P L+ + ++ I
Sbjct: 296 QIIAGSEHSAALTENGDVYVWGRNQYGNLG-NGITSPANTIQSTP-LKVEGLSKIK---- 349
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
Q+ NG++ + L S+GKIY++G + G+LG+ P+
Sbjct: 350 --------------------QIANGRDHILALTSDGKIYSWGLNASGQLGIGGNGNPLPT 389
Query: 414 PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM-GN--GYQLGNGKEDDILEPMK 468
P P L + SI G SFAI G + GWG GN LG + EP K
Sbjct: 390 PIPTQVLNIQDAESIWAGGTQSFAILKNGEVKGWGANGNMASLALGESNTPKVYEPNK 447
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 170/376 (45%), Gaps = 46/376 (12%)
Query: 37 GVVLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G + T G+ + GQLG G ++ +R V+ + ++ + +++ +++ G+VYT
Sbjct: 143 GKLYTVGRNNFGQLGTGISTGDNINDR--IVKVDLIQDIFSIHFNQNNSMAISKSGRVYT 200
Query: 93 WGCNDEGALG---------REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
WG N +G LG + ++ + P +N AV + G +H++ L DGTV A
Sbjct: 201 WGANSKGQLGIGNNNTDPAKASDPGNRQPPTEINGIDNAVMGAYGFNHALVLKSDGTVVA 260
Query: 144 WGSF---RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
+G + +G+ L P+ + + +++I +G++H LT G++ G +
Sbjct: 261 FGQNNVGQLGNGANNLDRNSFSSIPVNVAQLRNVIQIIAGSEHSAALTENGDVYVWGRNQ 320
Query: 201 QGQLGR-ITQRSASRNAR----RGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G LG IT + + + G+S ++ ++ R HI ++S G I +
Sbjct: 321 YGNLGNGITSPANTIQSTPLKVEGLSKIK--QIANGRDHI---------LALTSDGKIYS 369
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
+GLN QLG + +GN TP + L+ + + +G S A+ G++ +
Sbjct: 370 WGLNASGQLG-----IGGNGNP-LPTPIPTQVLNIQDAESIWAGGTQSFAILKNGEVKGW 423
Query: 316 GRH-DYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
G + + L L + P V EP D + CG +FA+ G +YGWG
Sbjct: 424 GANGNMASLALGESNTPKVYEPNKAVVGIDN-VVHFGCGATHNFALLGNGEIYGWGWNFK 482
Query: 374 YQLGNGKEDDILNSEG 389
LG +D+ N+ G
Sbjct: 483 GSLG---RNDLQNNWG 495
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLG---PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
T G V G+ G LG G P + T VE L + ++ G H + LT DGK+
Sbjct: 308 TENGDVYVWGRNQYGNLGNGITSPANTIQSTPLKVEGLSKIKQIANGRDHILALTSDGKI 367
Query: 91 YTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSF 147
Y+WG N G LG G+ P Q +N+ + A I AG + S A+L++G V WG
Sbjct: 368 YSWGLNASGQLGIGGNGNPLPTPIPTQVLNI-QDAESIWAGGTQSFAILKNGEVKGWG-- 424
Query: 148 RDSHGSMGLKGEGIQKTPLKLE------SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
++G+M G TP E + +V GA H L G + G +
Sbjct: 425 --ANGNMASLALGESNTPKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFK 482
Query: 202 GQLGR 206
G LGR
Sbjct: 483 GSLGR 487
>gi|269125261|ref|YP_003298631.1| regulator of chromosome condensation RCC1 [Thermomonospora curvata
DSM 43183]
gi|268310219|gb|ACY96593.1| regulator of chromosome condensation RCC1 [Thermomonospora curvata
DSM 43183]
Length = 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 195/438 (44%), Gaps = 75/438 (17%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA-----VQISAGDSHSVALLEDGTVY 142
G+V++ G N+ G LGRE+ + + L K V ++AG HS+A+L DG V
Sbjct: 51 GEVWSSGLNENGQLGRESREMDLSLGPVLGLGGKGRLRNVVAVAAGGRHSLAVLSDGRVV 110
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLES-------VSGIVKIASGADHFVMLTSRGNLLT 195
AWG+ + HG +G + P+ + + + G V +A+ +D + L G ++T
Sbjct: 111 AWGA--NDHGQLGDGTRRDSRHPVLVRAPGSGKGHLRGAVAVAADSDFSMALLKDGRVVT 168
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEV--PLKRKHIDDVFT----GVYNTFISS 249
G + GQ G I ++ A L P V P RK + DV G +
Sbjct: 169 WGKGDAGQRG-IGRKEAP---------LLPTVVLRPDGRKPLTDVVQIAADGRTELVLRK 218
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF----TMLASGQHHSLA 305
GS+LA+G N+Y +G+ + Q+S P ++ L+ +++ + +A G H LA
Sbjct: 219 DGSVLAWGANDYGMVGDG-TRKQRS------LPVRVRGLNGRRWLSGVSKIAIGGQHGLA 271
Query: 306 LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT----ITSIACGNCVSFAIDS 361
L +G++ A+GR++ G+LG ++ T P P+ + K I +I+ +FA+
Sbjct: 272 LLRDGRVVAWGRNELGQLGNGTRTDS-TVPKPVSGVGGKGELSGIVAISAAEKHNFALTK 330
Query: 362 EGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
L WG QLG+G + + + G H P LQ
Sbjct: 331 NATLVAWGNNTAGQLGDGT---LTLRDTPVNVVGTHG-------------------PLLQ 368
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYT 478
+ + G AI S+G WG G QLG GK P + ++G+ ++
Sbjct: 369 G--VAQVHAGEAHGVAILSDGSALSWGAGRKGQLGWGKRLHRSRPGPLITVDGRAPSD-- 424
Query: 479 VLQVASGGQHSVILAKPK 496
V+ A+G +H ++L P+
Sbjct: 425 VMTAAAGERHLLLLMAPQ 442
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 167/400 (41%), Gaps = 62/400 (15%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVE-----DLDNVV 72
Q+ + EA P G G V + G + GQLG M+ ++ L NVV
Sbjct: 32 QRGYGPDEAPPPGDRAHGPGEVWSSGLNENGQLGRESREMDLSLGPVLGLGGKGRLRNVV 91
Query: 73 EVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-------KKAVQI 125
V GG H++ + DG+V WG ND G LG DS P V P + AV +
Sbjct: 92 AVAAGGRHSLAVLSDGRVVAWGANDHGQLGDGTRRDSRH-PVLVRAPGSGKGHLRGAVAV 150
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL---------KLESVSGIVK 176
+A S+ALL+DG V WG G G +G G ++ PL + ++ +V+
Sbjct: 151 AADSDFSMALLKDGRVVTWGK-----GDAGQRGIGRKEAPLLPTVVLRPDGRKPLTDVVQ 205
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNAR-RGMSFLEPGEVPLKRKHI 235
IA+ ++L G++L G + G +G T++ S R RG++ R+ +
Sbjct: 206 IAADGRTELVLRKDGSVLAWGANDYGMVGDGTRKQRSLPVRVRGLN---------GRRWL 256
Query: 236 DDV----FTGVYNTFISSKGSILAFGLNNYSQLG---EADSEVQKSGNTCFFTPHLIKSL 288
V G + + G ++A+G N QLG DS V K + L
Sbjct: 257 SGVSKIAIGGQHGLALLRDGRVVAWGRNELGQLGNGTRTDSTVPKPVSGVGGKGEL---- 312
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI-------PSL 341
+++ + H+ AL + A+G + G+LG ++ TP+ P L
Sbjct: 313 --SGIVAISAAEKHNFALTKNATLVAWGNNTAGQLGDGTLT---LRDTPVNVVGTHGPLL 367
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
Q + + G AI S+G WG G QLG GK
Sbjct: 368 QG--VAQVHAGEAHGVAILSDGSALSWGAGRKGQLGWGKR 405
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 37 GVVLTCGQGDTGQLGLGP--DVMERKTFALVE---DLDNVVEVVVGGMHTVCLTEDGKVY 91
G V+ G+ + GQLG G D K + V +L +V + H LT++ +
Sbjct: 276 GRVVAWGRNELGQLGNGTRTDSTVPKPVSGVGGKGELSGIVAISAAEKHNFALTKNATLV 335
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVN-------LPKKAVQISAGDSHSVALLEDGTVYAW 144
WG N G LG +G VN L + Q+ AG++H VA+L DG+ +W
Sbjct: 336 AWGNNTAGQLG---DGTLTLRDTPVNVVGTHGPLLQGVAQVHAGEAHGVAILSDGSALSW 392
Query: 145 GSFRDSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTS 189
G+ R G +G + P L +V G ++ A+G H ++L +
Sbjct: 393 GAGRK--GQLGWGKRLHRSRPGPLITVDGRAPSDVMTAAAGERHLLLLMA 440
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 39/326 (11%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFA--LVEDLDN--VVEVVVGGMHTVCLTEDGKVYT 92
G + T G G+LG+G ++ +F LV L V++V G HT + + G++++
Sbjct: 41 GYLYTMGSNALGKLGIGQQSLQN-SFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFS 99
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKK------AVQISAGDSHSVALLEDGTVYAWGS 146
WG + EG LG + G S + PQ VN +S G H+VA+L++G V ++GS
Sbjct: 100 WGDSSEGQLGINSNG-SHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGS 158
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+ G +G + Q P L S+S I+K+ G H + L G + + G ++GQLG+
Sbjct: 159 GKK--GQLGTGNQNKQYKPFLLNSLSQIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQ 216
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGE 266
+ R + L+ I +F G ++ I+ I FG SQLG+
Sbjct: 217 GHNEGNISSPRLVL--------ELEHSFIKKIFAGSHSAAITDANEIYFFG---KSQLGQ 265
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
F P L++ + ++ G H +A+ +GK+Y++G + G+LG +
Sbjct: 266 ------------FLYPQLVR-ICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLG-Q 311
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACG 352
S+ P+ + L +K + S CG
Sbjct: 312 GDSDVRIIPSLVEPLNEKKVISATCG 337
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 40/322 (12%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG-DSEFIPQTVN-LPK-KAVQISA 127
+ ++ G HT + ++G +YT G N G LG + + F PQ V+ L K K +Q+S
Sbjct: 24 IHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSC 83
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP--LKLESVSGI----VKIASGA 181
G SH+ A+++ G +++WG S G +G+ G P + + GI ++ G
Sbjct: 84 GHSHTCAIIDSGELFSWGD--SSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGY 141
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H V + G + + G ++GQLG + ++N + L +K K G
Sbjct: 142 YHTVAVLKNGQVCSFGSGKKGQLG-----TGNQNKQYKPFLLNSLSQIIKVK------CG 190
Query: 242 VYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
Y+T F+ G + + GLN+ QLG+ +E GN +P L+ L + +G
Sbjct: 191 FYHTLFLDESGRVYSCGLNDEGQLGQGHNE----GNIS--SPRLVLELEHSFIKKIFAGS 244
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
HS A+ +IY FG+ G+ P + Q + I+ GN A+
Sbjct: 245 -HSAAITDANEIYFFGKSQLGQF---------LYPQLVRICQG-DVNEISIGNHFGVAVT 293
Query: 361 SEGVLYGWGMGNGYQLGNGKED 382
+G +Y WG+ QLG G D
Sbjct: 294 YDGKVYSWGINQQGQLGQGDSD 315
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 162/399 (40%), Gaps = 60/399 (15%)
Query: 101 LGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEG 160
LG + P+ + Q++ G H+ + ++G +Y GS ++ G +G+ +
Sbjct: 3 LGENKRNSVFYYPRVCSFQIVIHQLACGLDHTAFVAKNGYLYTMGS--NALGKLGIGQQS 60
Query: 161 IQKT--PLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA 216
+Q + P + ++S +++++ G H + G L + G +GQLG I + N
Sbjct: 61 LQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLG-INSNGSHYNP 119
Query: 217 RRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSG 275
+ + ++ + DV G Y+T + G + +FG QLG + Q
Sbjct: 120 Q----LVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQ--- 172
Query: 276 NTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP 335
+ P L+ SLS + + G +H+L L+ G++Y+ G +D G+LG + ++ P
Sbjct: 173 ----YKPFLLNSLS--QIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSP 226
Query: 336 TPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG 395
+ L+ I I G+ + D+ +IY FG
Sbjct: 227 RLVLELEHSFIKKIFAGSHSAAITDAN---------------------------EIYFFG 259
Query: 396 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
+ G+ P + Q + I+ GN A+ +G +Y WG+ QL
Sbjct: 260 KSQLGQF---------LYPQLVRICQG-DVNEISIGNHFGVAVTYDGKVYSWGINQQGQL 309
Query: 456 GNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G G D + P +E LN V+ G + + L +
Sbjct: 310 GQGDSDVRIIPSLVE--PLNEKKVISATCGENYVICLGQ 346
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 144/312 (46%), Gaps = 46/312 (14%)
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYN--TFISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
S LEP + R I V+ N ++ + G N Y LG D++ +T
Sbjct: 15 FSLLEPKFISNVRMAI--VYGKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQ-----ST 67
Query: 278 CFFTPHLIKSLSDKKFTMLASGQ-HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
+ P I++L K A G+ H LAL EGK+Y++G +DY LG K+ +E +T PT
Sbjct: 68 IY--PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLT-PT 124
Query: 337 PIPS-LQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG------------------ 377
+PS L DK + IACG S A+ ++G +Y WG Q+G
Sbjct: 125 LVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVG 184
Query: 378 -NGKE----------DDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
NGK+ + G++Y++G + G+LGL N + V EP + + I
Sbjct: 185 LNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQV-EPQKVATFAKIVIE 243
Query: 427 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGG 486
+ CG + A+ EGVLY WG + QLG + ++ P K+E ++ +L + +
Sbjct: 244 KVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGR--ILDIVTSH 301
Query: 487 QHSVILAKPKPN 498
H + LA + N
Sbjct: 302 YHHISLAMSEGN 313
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLG-----------LGPDVMERKTFALVEDLDNVVEVVV 76
P + T G V + G D +LG L P V++ K VV++
Sbjct: 90 PHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKF---------VVDIAC 140
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNL---PKKAVQISAGDSHS 132
GG H++ LT G++Y WG N G +G + IP+ +N+ KK V IS GDS S
Sbjct: 141 GGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSS 200
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSR 190
VA+ + G VY+WG + G +GL Q P K+ + + IV K+ G H + L+
Sbjct: 201 VAVTDSGEVYSWG--HNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDE 258
Query: 191 GNLLTAGCPEQGQLG 205
G L G GQLG
Sbjct: 259 GVLYVWGANSYGQLG 273
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREA--EGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
G H + LTE+GKVY+WG ND LG ++ EG + + +V K V I+ G HS+AL
Sbjct: 89 GPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLAL 148
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV----SGIVKIASGADHFVMLTSRG 191
G +YAWG G +Q P KL +V +V I+ G V +T G
Sbjct: 149 TNKGEIYAWGHNVSGQVGCGTILSTVQPIP-KLLNVGLNGKKVVHISCGDSSSVAVTDSG 207
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISS 249
+ + G GQLG S +EP +V + I+ V G +T +S
Sbjct: 208 EVYSWGHNGVGQLG----------LGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSD 257
Query: 250 KGSILAFGLNNYSQLG-EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH-SLALN 307
+G + +G N+Y QLG DS V T P + + L ++ S HH SLA++
Sbjct: 258 EGVLYVWGANSYGQLGLNTDSNVWIP--TKLEVPEMGRILD-----IVTSHYHHISLAMS 310
Query: 308 SEGKIYAFGR 317
+I+ +G+
Sbjct: 311 EGNRIFMWGQ 320
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVE-VVVGGMHTVCLTEDGKVYT 92
T G V + G GQLGLG + + + V+E VV G MHT+ L+++G +Y
Sbjct: 204 TDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYV 263
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH----SVALLEDGTVYAWG 145
WG N G LG + + +IP + +P+ + SH S+A+ E ++ WG
Sbjct: 264 WGANSYGQLGLNTDSNV-WIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 177/401 (44%), Gaps = 62/401 (15%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALG---REAEGDSEFIPQTVNLPKKAV-QISAGDSHS 132
GG H++ + DG V+ WG N G LG +A + P V +++AG+ HS
Sbjct: 63 GGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHS 122
Query: 133 VALLEDGTVYAWGSFRDSHGSMGLKGEGI---QKTPLKLESV-----SGIVKIASGADHF 184
+AL G V+ WG S G G+G +++P+K+ + IV A G H
Sbjct: 123 LALTAKGEVWTWGD-----NSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHS 177
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYN 244
+ + S G + G GQ+G T ++ +N R+ M F +P + V G +
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKN-RQNPRQVMRFGKP------LAGVKAVAAGFAH 230
Query: 245 TF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHS 303
+ +S G++ A+G N + QLG+ +K+ H + D +A+G+ S
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVM---HSVDRPLD-NVVAIAAGRAFS 286
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD---KTITSIACGNCVSFAID 360
LAL +G+++A+G + G+LG+ + V +P P+ + K + +I S A+
Sbjct: 287 LALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALM 346
Query: 361 SEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
++G + WG G+ QLG G ++ H+ PT + SL
Sbjct: 347 NDGSVLAWGAGDRGQLGQGAQN--------------HE-------------DHPT-LASL 378
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 461
++ +A G S A+ G + WG QLG GK D
Sbjct: 379 H--SVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKAD 417
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 161/360 (44%), Gaps = 30/360 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVED----LDNVVEVVVGGMHTVCLTEDGKVYT 92
G V G +GQLG+G + ++ L+ V++V G H++ LT G+V+T
Sbjct: 74 GTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWT 133
Query: 93 WGCNDEGALG----REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG N +G LG E + N + V + G HS+A+ DGTV+AWGS
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193
Query: 149 DSH-GSMGLKGEGIQKTPLKL-ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
D G LK + ++ + ++G+ +A+G H + L+ G + G E GQLG
Sbjct: 194 DGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGD 253
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLG 265
+ + + + + + PL ++ + G ++ ++ G + A+G N QLG
Sbjct: 254 CSD----YDRKAPVQVMHSVDRPL--DNVVAIAAGRAFSLALTRDGEVWAWGNNGVGQLG 307
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSD---KKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
N P +++ + K + + HSLAL ++G + A+G D G+
Sbjct: 308 MGPH------NGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
LG + PT + SL ++ +A G S A+ G + WG QLG GK D
Sbjct: 362 LG-QGAQNHEDHPT-LASLH--SVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKAD 417
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 30/305 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVED-----LDNVVEVVVGGMHTVCLTEDG 88
T G V T G GQLG G ER++ V L+N+V GG H++ + DG
Sbjct: 126 TAKGEVWTWGDNSKGQLGDG-FFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDG 184
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQ-ISAGDSHSVALLEDGTVYAWG 145
V+ WG N +G +G + + Q + P V+ ++AG +HS+AL DGTV+AWG
Sbjct: 185 TVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWG 244
Query: 146 SFRDSHGSMGLKGEGIQKTPLKL-----ESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
+ G +G + +K P+++ + +V IA+G + LT G + G
Sbjct: 245 D--NEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNG 302
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
GQLG R+ + VPLK G ++ + + GS+LA+G +
Sbjct: 303 VGQLGMGPHNGFVRDP---LPVRAANGVPLKGVRAITA-NGRHSLALMNDGSVLAWGAGD 358
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
QLG+ + P L S LA+G++HSLA+ G + A+G +
Sbjct: 359 RGQLGQGAQNHEDH-------PTLA---SLHSVICLAAGRYHSLAVAENGAVLAWGDNQK 408
Query: 321 GRLGL 325
G+LG+
Sbjct: 409 GQLGI 413
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 48/291 (16%)
Query: 241 GVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFT---MLA 297
G ++ + + G++ A+G N+ QLG N +P + S +A
Sbjct: 64 GYHSLVVKNDGTVWAWGDNSSGQLGIGT-------NKASLSPVRVMHKSGAPLNGVLKVA 116
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI---ACGNC 354
+G+ HSLAL ++G+++ +G + G+LG E P + ++ + +I ACG
Sbjct: 117 AGERHSLALTAKGEVWTWGDNSKGQLGDGFFYER-RSPVKVRHIRTNPLENIVGAACGGK 175
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD----------------------------ILN 386
S A+ S+G ++ WG + Q+G+G + L+
Sbjct: 176 HSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALS 235
Query: 387 SEGKIYAFGRHDYGRLGL---KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+G ++A+G +++G+LG + PV + D + +IA G S A+ +G
Sbjct: 236 VDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLD-NVVAIAAGRAFSLALTRDGE 294
Query: 444 LYGWGMGNGYQLGNGKEDDIL-EPMKIEGKQ-LNNYTVLQVASGGQHSVIL 492
++ WG QLG G + + +P+ + + V + + G+HS+ L
Sbjct: 295 VWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLAL 345
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-----KTITS 427
G G G ++ ++G ++A+G + G+LG+ ++ P+ + +
Sbjct: 58 GIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLS---PVRVMHKSGAPLNGVLK 114
Query: 428 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY-TVLQVASGG 486
+A G S A+ ++G ++ WG + QLG+G + P+K+ + N ++ A GG
Sbjct: 115 VAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGG 174
Query: 487 QHSVILA 493
+HS+ +A
Sbjct: 175 KHSLAVA 181
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,358,190,410
Number of Sequences: 23463169
Number of extensions: 382051739
Number of successful extensions: 805593
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3622
Number of HSP's successfully gapped in prelim test: 2091
Number of HSP's that attempted gapping in prelim test: 657518
Number of HSP's gapped (non-prelim): 43405
length of query: 498
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 351
effective length of database: 8,910,109,524
effective search space: 3127448442924
effective search space used: 3127448442924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)