BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1173
(498 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 256/399 (64%), Gaps = 26/399 (6%)
Query: 5 LKKVLRKQAENPSQKVFVTSEAVPTLKCK---TGGGVVLTCGQGDTGQLGLGPDVMERKT 61
LK+ + + N + V T +A+P + T GG VLT GQGD GQLGLG D+MERK
Sbjct: 7 LKRTIAAEESNGTSDVKKT-KALPIVTHPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKK 65
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGRE-AEGDSEFIPQTVNLPK 120
ALV +++V+ GGMHTVCL G +YT+GCNDEGALGR+ +E SE P V L +
Sbjct: 66 PALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAE 125
Query: 121 KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKT--PLKLESVSGIVKIA 178
K VQ+SAGDSH+ AL EDG V+ +GSFRD++G +GL E ++K+ P++++ + ++KIA
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL-EPMKKSMVPVQVQINTPVIKIA 184
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS-FLEPGEVPLK-----R 232
SG DH V+LT G+L T+GC EQGQLGR+ +R +R R+G+ L P + LK R
Sbjct: 185 SGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGR 244
Query: 233 KHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--S 289
H DVF G Y TF +S +G + FGL+NY QLG +++ C + P + S S
Sbjct: 245 VHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQA------C-YAPQNLTSFKNS 297
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K + + GQHH++ ++SEGK Y+ GR +YGRLGL +E +EPTPIP L I S+
Sbjct: 298 TKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL--PKINSV 355
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSE 388
A G VS+A+ ++G ++ WGMG QLG G+E+D+ + E
Sbjct: 356 ASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPE 394
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 190/393 (48%), Gaps = 69/393 (17%)
Query: 152 GSMGLKGEGI--QKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL GE I +K P + IV+ A+G H V L + G++ T GC ++G LGR T
Sbjct: 52 GQLGL-GEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTS 110
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEA 267
S ++PG+V L K + + ++ G + FG +N +G
Sbjct: 111 EEGSE--------MQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL 162
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
+ ++KS P ++ + +ASG H + L +G +Y G + G+LG
Sbjct: 163 EP-MKKS-----MVP--VQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG--R 212
Query: 328 VSEPVT--------EPTPIPS---LQDK-----TITSIACGNCVSFAIDSEGVLYGWGMG 371
V E T E +P L+ K + CG +FA+ EG +YG+G+
Sbjct: 213 VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 272
Query: 372 NGYQLGN---------------------------GKEDDI-LNSEGKIYAFGRHDYGRLG 403
N +QLG G+ + ++SEGK Y+ GR +YGRLG
Sbjct: 273 NYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLG 332
Query: 404 LKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
L +E +EPTPIP L I S+A G VS+A+ ++G ++ WGMG QLG G+E+D+
Sbjct: 333 LGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDV 390
Query: 464 LEPMKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
P ++ GK L + VL V+SGGQH+V+L + +
Sbjct: 391 WSPEQMTGKHLEDREVLSVSSGGQHTVLLVRKR 423
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 233/364 (64%), Gaps = 23/364 (6%)
Query: 33 KTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
KT G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL + G+VY+
Sbjct: 31 KTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVYS 90
Query: 93 WGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
+GCNDEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNN 150
Query: 152 GSMGLKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +GL E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ +
Sbjct: 151 GVIGLL-EPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPE 209
Query: 210 RSASRNARRGMS-FLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNY 261
A+R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY
Sbjct: 210 LFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNY 269
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
QLG G F P + S S K + + GQHH++ ++SEGK Y+ GR +
Sbjct: 270 HQLG-------TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAE 322
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YGRLGL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Query: 380 KEDD 383
+++D
Sbjct: 381 QDED 384
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 202/434 (46%), Gaps = 77/434 (17%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHKTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT--------EPTPIP 339
D +ASG H + L ++G +Y G + G+LG V E E +P
Sbjct: 169 QLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG--RVPELFANRGGRQGLERLLVP 226
Query: 340 S---LQDK------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN------------ 378
L+ + CG ++FAI EG +YG+G+ N +QLG
Sbjct: 227 KCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNL 286
Query: 379 ---------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD 422
G+ I ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 344
Query: 423 KTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQV 482
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V
Sbjct: 345 PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Query: 483 ASGGQHSVILAKPK 496
+SGGQH+V+L K K
Sbjct: 405 SSGGQHTVLLVKDK 418
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 308 bits (790), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 233/360 (64%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG V+ERK ALV L +VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL EDG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ + +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGM-SFLEPGEVPLK------RKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
G F P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 -------TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 384
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 73/430 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S H E G V G + G +GL GE + +K P +
Sbjct: 12 PPEDAIPKSKKVKVS----HRSHNTEPGLVLTLG--QGDVGQLGL-GESVLERKKPALVP 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ +V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG--------------LKNVSEPVT 333
D +ASG H + L ++G +Y G + G+LG L + P
Sbjct: 169 QLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRC 228
Query: 334 EPTPIPSLQDKTITSIA-CGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ + A CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PV 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSS 406
Query: 485 GGQHSVILAK 494
GGQH+V+L K
Sbjct: 407 GGQHTVLLVK 416
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +++DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ------ISAGDSHSVALLED 138
WG LG G E V + K ++ +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 308 bits (790), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 238/360 (66%), Gaps = 23/360 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G+VLT GQGD GQLGLG +VMERK ALV ++VV+ GGMHTVCL++ G+VY++GCN
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 97 DEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMG 155
DEGALGR+ + SE +P V L +K VQ+SAGDSH+ AL +DG V+ WGSFRD++G +G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG 154
Query: 156 LKGEGIQKT--PLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L E ++K+ P++++ +VK+ASG DH VMLT+ G+L T GC EQGQLGR+ + A+
Sbjct: 155 LL-EPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 213
Query: 214 RNARRGMS-FLEPGEVPLK----RKHI--DDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R R+G+ L P V LK R H+ D F G Y TF IS +G + FGL+NY QLG
Sbjct: 214 RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Query: 266 EADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
+E +CF P + S S K + + GQHH++ ++SEGK Y+ GR +YGRL
Sbjct: 274 TPGTE------SCFI-PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
GL +E + PT I L ++S+ACG V +A+ +G ++ WGMG YQLG G+++D
Sbjct: 327 GLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 113 PQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLE 169
P +PK K V++S SHS E G V G + G +GL GE + +K P +
Sbjct: 12 PPADAIPKSKKVKVSH-RSHST---EPGLVLTLG--QGDVGQLGL-GENVMERKKPALVS 64
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+V+ +G H V L+ G + + GC ++G LGR T S + PG+V
Sbjct: 65 IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVE 116
Query: 230 LKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
L+ K + + ++ G + +G +N +G + ++KS P ++
Sbjct: 117 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKS-----MVP--VQV 168
Query: 288 LSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL----------KNVSEPVTEPTP 337
D +ASG H + L ++G +Y G + G+LG + E + P
Sbjct: 169 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 228
Query: 338 IP-----SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------------- 378
+ S CG +FAI EG +YG+G+ N +QLG
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 379 -------------GKEDDI-LNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 424
G+ + ++SEGK Y+ GR +YGRLGL +E + PT I L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PA 346
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVAS 484
++S+ACG V +A+ +G ++ WGMG YQLG G+++D P+++ GKQL N VL V+S
Sbjct: 347 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSS 406
Query: 485 GGQHSVILAKPK 496
GGQH+V+L K K
Sbjct: 407 GGQHTVLLVKDK 418
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
C G + G+ + G+LGLG E+ L+ L V V G +T+DG+V+
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF 367
Query: 92 TWGCNDEGALGREAEGDS----EFIPQTVNLPKKAVQISAGDSHSVALLED 138
WG LG + D+ E + + + + + +S+G H+V L++D
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLE-NRVVLSVSSGGQHTVLLVKD 417
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 222/360 (61%), Gaps = 14/360 (3%)
Query: 31 KCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
K +T G VL CG GD GQLGLG D++ERK + V + + V++ GGMH + LT+ G +
Sbjct: 36 KRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 91 YTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
Y++GCNDEGALGR+ D SE P ++LP KA+ ISAGDSHS LLEDG V+AWGSFRD
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
SHG+MGL +G ++TP+ L + IASGADH V+LT+ G + T GC EQGQLGR+++
Sbjct: 156 SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 210 RSASRNARRG-MSFLEPGEVPLKR-KHIDDVFTGVYNTFI--SSKGSILAFGLNNYSQLG 265
RS S RRG L P ++ + R K + ++ Y TF+ S I A GLNN+ QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLA 275
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
+ G TP IK+ K +A GQHH++ L ++ K GR +YGRLGL
Sbjct: 276 H-----ETKGKEFALTP--IKT-ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 326 KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDIL 385
+V + V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD L
Sbjct: 328 GDVKDVVEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 386
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 176/384 (45%), Gaps = 61/384 (15%)
Query: 152 GSMGLKGEGIQKTPLKLESVSGI---VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
G +GL GE I + +L V+GI V I++G H ++LT G++ + GC ++G LGR T
Sbjct: 53 GQLGL-GEDILERK-RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG--LNNYSQLGE 266
S + +P + L K + ++ + G + A+G +++ +G
Sbjct: 111 SEDGSES--------KPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG- 161
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG---RHDYGRL 323
+ GN TP I + +ASG H + L + GK++ G + GRL
Sbjct: 162 ----LTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 324 GLKNVS-------EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG-VLYGWGMGNGYQ 375
+++S + PT + + K +I N +F +S+ V++ G+ N Q
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQ 273
Query: 376 LGN---GKE----------------------DDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
L + GKE IL ++ K GR +YGRLGL +V +
Sbjct: 274 LAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 333
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
V +PT + L +K I S+ CG S+A+ +G LY WG G QLG G DD LEP+ +
Sbjct: 334 VEKPTIVKKLTEK-IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
K +L + GGQH++ L K
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLVK 416
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 182/380 (47%), Gaps = 48/380 (12%)
Query: 39 VLTCGQGDTGQLGLGPDVME-----RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
V G G +LG+G + M+ R L D VV++ VGGMH+ L+ DG+VYTW
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 94 GCNDEGALGR------EAEGDS------EFIPQTVN---LPKKAVQISAGDSHSVALLED 138
G ND+ ALGR + GD E P V + ++ D+ + A+ ++
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 139 GTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGC 198
G + WG+FR S G +G + + I ++A+G DH + LT+ G + T G
Sbjct: 193 GCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGN 252
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+Q QLGR RR + L P PL K+I V G Y++F I +KG + A+G
Sbjct: 253 GQQFQLGRRMLE------RRRLQGLTPQ--PLALKNIISVGAGSYHSFAIDNKGRVYAWG 304
Query: 258 LNNYSQLGEADSEVQKSGNTCFFT-PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
LN Q G EV+ T P L+ +L + G+HH+LAL +G++ A+G
Sbjct: 305 LNITRQCG---IEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWG 361
Query: 317 RHDYGRLGLKNVSEPVT-------------EPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
R D +LG+ + + P T PT IP L + + + CG + A+ S+G
Sbjct: 362 RDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN--VIQVVCGTHHNLAVTSDG 419
Query: 364 VLYGWGMGNGYQLGNGKEDD 383
+Y WG Y++G G D+
Sbjct: 420 KVYSWGSAENYEVGQGDNDE 439
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 182/447 (40%), Gaps = 83/447 (18%)
Query: 112 IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-------- 163
+P+ V +P A +I+ L VY +GS GSM G G ++
Sbjct: 47 LPKPVRVPGSAKRINKIPELPTERL---NVYVFGS-----GSMNELGMGEEEMDVVYRPR 98
Query: 164 -TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARR-GMS 221
P+ G+V +A G H L+ G + T G + LGR+T+ N +
Sbjct: 99 LNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDND 158
Query: 222 FLE--PGEVPLKRKHI---DDVFTGVYNTFISSKGSILAFGLNNYSQ--LGEADSEVQKS 274
LE P +V H+ + + I+ G +G S LG +DS+ + +
Sbjct: 159 LLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTA 218
Query: 275 GNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTE 334
T P + + LA+G H +AL + GK+Y +G +LG + + +
Sbjct: 219 EPTQMRLPEICQ---------LATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQ 269
Query: 335 -PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------- 383
TP P L K I S+ G+ SFAID++G +Y WG+ Q G ED+
Sbjct: 270 GLTPQP-LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 384 ---------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVT---------- 412
L +G++ A+GR D +LG+ + + P T
Sbjct: 329 LVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNY 388
Query: 413 ---EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMK 468
PT IP L + + + CG + A+ S+G +Y WG Y++G G D D+ P
Sbjct: 389 YLSTPTIIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTL 446
Query: 469 IEGKQLNNYTVLQVASGGQHSVILAKP 495
+ K + + +GGQ S+I P
Sbjct: 447 VRSKAIKEVAIRVAGAGGQFSIIAGIP 473
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 37 GVVLTCGQGDTGQLGLGPD-------VMERK-------TFALVEDLDNVVEVVVGGMHTV 82
G VL G+ D QLG+ PD V + K T ++ L NV++VV G H +
Sbjct: 355 GRVLAWGRDDRHQLGI-PDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNL 413
Query: 83 CLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
+T DGKVY+WG + +G+ + +P V
Sbjct: 414 AVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 181/398 (45%), Gaps = 64/398 (16%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ G G +LGLGP ++ L D ++ VGGMHT+ L E+ V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 93 WGCNDEGALGR--------------------------EAEGDSEFIPQTVNLP----KKA 122
WGCND GALGR E E IP+ P K
Sbjct: 108 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKV 167
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE--GIQKTPLKLESVS--GIVKIA 178
VQ++A D+ S AL +G VYAWG+FR + G +G + IQKTP K+ + S IV++A
Sbjct: 168 VQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLA 227
Query: 179 SGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
G DH + L G + G +Q QLGR R + L+P P +H+ +
Sbjct: 228 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVME------RFRLKTLDPR--PFGLRHVKYI 279
Query: 239 FTGVYNTFISSK-GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G + F +K ++++GLN + Q G SE + G P + + +A
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGV--SEDVEDG-ALVTKPKRLALPDNVVIRSIA 336
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT--I 346
+G+HHSL L+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 347 TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDD 383
S+A G+ S A+ G+ Y WG G Y +G G EDD
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 434
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 89/427 (20%)
Query: 141 VYAWGSFRDSHGSMGL----KGEGIQK---TPLKLESVSGIVKIASGADHFVMLTSRGNL 193
++ WG+ S +GL K + +++ P + I+ A G H + L N+
Sbjct: 48 IFCWGT--GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 194 LTAGCPEQGQLGRITQRSASR-----------NARRGMSFLE--PGEVPLK--------R 232
+ GC + G LGR T + + + ++ LE P ++P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 233 KHIDDVFTGVYNTFISSKGSILAFGLNNYSQ--LG--EADSEVQKSGNTCFFTPHLIKSL 288
K + T + + S G + A+G ++ LG + ++QK TP + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK-------TPWKVPTF 218
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE---PVTEPTPIPSLQDKT 345
S LA G+ H L L+ EG ++A+G +LG K + +P P +
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGL---RH 275
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------- 383
+ IA G FA+ + L WG+ Q G ++ +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 384 --------ILNSEGKIYAFGRHDYGRLGLKNVSEP---------VTEPTPIPSLQDKT-- 424
IL+ +G +Y+ GR D +G+ + P P+P+ +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK-EDDILEPMKIEGKQLNNYTVLQVA 483
S+A G+ S A+ G+ Y WG G Y +G G EDD P +I+ ++ ++ V
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVG 455
Query: 484 SGGQHSV 490
GGQ SV
Sbjct: 456 CGGQFSV 462
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLGLKNVSEPVTE-PTPIPSLQDKTITS 348
K LA+ + S AL S G++YA+G R + G LG + + P +P+ I
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
+A G +D EG+++ WG G QLG R R LK +
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLG------------------RKVMERFRLKTL- 266
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK--EDDILEP 466
+P P + + IA G FA+ + L WG+ Q G + ED L
Sbjct: 267 ----DPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 319
Query: 467 MKIEGKQLNNYTVLQVASGGQHSVILAK 494
+N + +A+G HS+IL++
Sbjct: 320 KPKRLALPDNVVIRSIAAGEHHSLILSQ 347
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 62/274 (22%)
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKI 312
I +G + +LG K P L + + K A G H+LAL+ E +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD--EAKIISFAVGGMHTLALDEESNV 105
Query: 313 YAFGRHDYGRLG--LKNVSEPVT------------------EPTPI--------PSLQDK 344
+++G +D G LG N E + E TP P +
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL 404
+ +A + +S A+ S G +Y WG R + G LG
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF------------------------RCNEGILGF 201
Query: 405 KNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI 463
+ + P +P+ I +A G +D EG+++ WG G QLG +
Sbjct: 202 YQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR----KV 257
Query: 464 LEPMK---IEGKQLNNYTVLQVASGGQHSVILAK 494
+E + ++ + V +ASG H L K
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTK 291
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFA----------LVEDLDNVVE---VVVGGMHTVC 83
G + +CG+ D ++G+ D + T+ L L+NV + V G H+V
Sbjct: 349 GDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVA 408
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
+ ++G Y+WG + A+G D +P +
Sbjct: 409 VAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRI 441
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 182/404 (45%), Gaps = 60/404 (14%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKT-------FALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
V G G +LGLGP ++ + E L +V+ VGGMHT+ L +
Sbjct: 26 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 85
Query: 90 VYTWGCNDEGALGREA--------------------------EGDSEFIPQTV-NLPK-K 121
+++WG ND LGR+ ++E P V NLP+ +
Sbjct: 86 IWSWGGNDSEVLGRDTCQAKEVLKDIDGKNGNDDDDDDEDGDLNEAESTPALVENLPEGE 145
Query: 122 AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGI--QKTPLKLESVSGIVKIAS 179
VQ++A D+ S ALL +G VY+WG FR + G +G + I QKTPLK++ + I
Sbjct: 146 IVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKKHCPIMR 205
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGR-ITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
++ + +Q QLGR I +R R+ LEP + L +I +
Sbjct: 206 SVKIILLALDSKEWMPGVNGQQYQLGRRILERHRYRS-------LEPQQFGLY--NIKYI 256
Query: 239 FTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
+G ++ F I ++ A+GLN Y Q + + P LI LS K +A
Sbjct: 257 ASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKEIA 316
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT----------EPTPIPSLQDKTIT 347
+G+HH+LAL +G++YA+GR+D +G+ P + + + +L I
Sbjct: 317 AGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFAVKIK 376
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKI 391
+I G+ SFA+ +GV+Y WG Y G G D + +I
Sbjct: 377 TIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 420
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 281 TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG-LKNVSEPVTEPTP 337
TP L+++L + + LA+ + S AL S G +Y++G R + G LG L++ + P
Sbjct: 134 TPALVENLPEGEIVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQKTPLK 193
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD-------------- 383
I L+ K + + A+DS+ + G G YQLG +
Sbjct: 194 IKELK-KHCPIMRSVKIILLALDSKEWMPGVN-GQQYQLGRRILERHRYRSLEPQQFGLY 251
Query: 384 -------------ILNSEGKIYAFGRHDYGRLGLKNVS------EPVTEPTPIPSLQDKT 424
++ +YA+G + YG+ L + + +PT IP L K
Sbjct: 252 NIKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKG 311
Query: 425 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
I IA G + A+ +G +Y WG + ++G K+ KI +++ LQ
Sbjct: 312 IKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQ 368
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 16 PSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVE 73
P +KV + S G +V + G+G+ GQLG G D +R + + LD +V
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVS 71
Query: 74 VVVGGMHTVCLTEDG-KVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------QIS 126
V G HTV ++ G +VY+WG D G LG D F P LP KA+ QI+
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL-FTP----LPIKALHGIRIKQIA 126
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-VK-IASGADHF 184
GDSH +A+ +G V +WG R+ +G +GL P K+++ GI +K +A+GA+H
Sbjct: 127 CGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 184
Query: 185 VMLTSRGNLLTAGCPEQGQLG------RITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
+T G+L G G LG R+ + MS + G
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW----------- 233
Query: 239 FTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLAS 298
+ +S G++ +G + Y QLG D E PH +++LS+ + ++
Sbjct: 234 ---RHTISVSYSGALYTYGWSKYGQLGHGDLEDH-------LIPHKLEALSNSFISQISG 283
Query: 299 GQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
G H++AL S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A
Sbjct: 284 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLA 342
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDD 383
+ ++ WG G QLG G+ D
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVD 367
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 179/391 (45%), Gaps = 61/391 (15%)
Query: 119 PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVK 176
P+K + ISAG SHSVALL V +WG R G +G + +P +L ++ G IV
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWG--RGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 71
Query: 177 IASGADHFVMLTSRG-NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH- 234
+ GADH V + G + + G G GR+ ++S P +P+K H
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGW---GDFGRLGHGNSS-------DLFTP--LPIKALHG 119
Query: 235 --IDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDK 291
I + G + ++ +G + ++G N QLG D+E P I++
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS-------LVPQKIQAFEGI 172
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ M+A+G H+ A+ +G +Y +G YG LGL + ++ + P + S + ++ +AC
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVAC 231
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------IL 385
G + ++ G LY +G QLG+G +D L
Sbjct: 232 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Query: 386 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 445
S+GK+Y +G + +G++G+ N + + P + D+ + ++CG + A+ ++
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 446 GWGMGNGYQLGNGKEDD-----ILEPMKIEG 471
WG G QLG G+ D I+E + ++G
Sbjct: 351 AWGRGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+K ++++G HS+AL S + ++GR + G+LG + +E PT + +L I S+
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRPSPTQLSALDGHQIVSVT 73
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG + A G+ ++Y++G D+GRLG N S+
Sbjct: 74 CGADHTVAYSQSGM-------------------------EVYSWGWGDFGRLGHGNSSDL 108
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
T P PI +L I IACG+ A+ EG + WG QLG G +D L P KI+
Sbjct: 109 FT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
+ VA+G +H+ + +
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTE 189
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 37 GVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G V + G+ GQLGLG D + + E + + V G HT +TEDG +Y WG
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
G LG D +P+ V +K ++ G H++++ G +Y +G + +G
Sbjct: 198 WGRYGNLGLGDRTD-RLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK--YG 254
Query: 153 SMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
+G P KLE++S I +I+ G H + LTS G L G + GQ+G
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG----- 309
Query: 211 SASRNARRGMSFLEPGEVPL-KRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ P +V + + V G +T ++ + ++ A+G QLG
Sbjct: 310 -----VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG--- 361
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ +S + F P +I++LS ASGQH
Sbjct: 362 --IGESVDRNF--PKIIEALSVDG----ASGQH 386
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 185/384 (48%), Gaps = 39/384 (10%)
Query: 36 GGVVLTCGQGDT-GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
G VL+CG+G+ G G RK E+ ++ V GG+H+ LT +G+VY G
Sbjct: 151 GDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCG 210
Query: 95 CNDEG---ALGREAEGDS-EF----IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
N++G A G E EG + EF + + K V ++AG S + AL + G+V AWG+
Sbjct: 211 INEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGN 270
Query: 147 FRDSHGSMGLKG--EGIQKTPLKL--ESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R+S+G++ + +Q+ P+ + ++ IVKIA+G +H VML +G LLT G E G
Sbjct: 271 LRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMG 330
Query: 203 QLGRITQRSASRNARRGMSFLEPGE---VPLKRKHIDDVF---------TGVYNTFISSK 250
QLGR S ++ R E G+ VPL+ KH F +G +
Sbjct: 331 QLGR---SSRTKTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGED 387
Query: 251 GSILAFGLNNYSQLG----EAD--SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
G AFGLNNY+QLG EAD + Q + F P + ++ + G H +
Sbjct: 388 GKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVV 447
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNVSEPVTEP----TPIPSLQ-DKTITSIACGNCVSFAI 359
L S+GK++A G++ LGL N + + I ++ D I ++ S A
Sbjct: 448 ILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAW 507
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDD 383
+G Y WG QLG G +D+
Sbjct: 508 SEDGTAYAWGFDTTGQLGLGLKDE 531
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 173/414 (41%), Gaps = 72/414 (17%)
Query: 121 KAVQISAGDSHSVALLEDGTVYAWG-SFRDSHGSMGLKGEGIQKTPLK------LESVSG 173
K +Q AG HS L +G VY G + + + + G++ EG K +E
Sbjct: 186 KPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGK 245
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL--- 230
IV +A+GA LT +G+++ G R+++ N + E P+
Sbjct: 246 IVMLAAGASFTAALTDQGSVIAWG----------NLRNSNGNVDVHPLLHKMQEAPVVIV 295
Query: 231 ---KRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFT-PHLI 285
KRK + + + KG +L FG QLG + ++ +S C + HL+
Sbjct: 296 HQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLL 355
Query: 286 KSLSDK---KF------TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
L K KF + ASG ++ +GK YAFG ++Y +LG+K V E
Sbjct: 356 VPLRFKHKGKFFDVVAKNVFASG-FWTIVHGEDGKYYAFGLNNYAQLGIK-----VDEAD 409
Query: 337 PIPSLQDKTITSI-------ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
QD + A G +F ++ EGV + IL S+G
Sbjct: 410 VGQDGQDNRELRVFLPAEAPAFGAERTF-VNIEGVQHVV---------------ILGSDG 453
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEP----TPIPSLQ-DKTITSIACGNCVSFAIDSEGVL 444
K++A G++ LGL N + + I ++ D I ++ S A +G
Sbjct: 454 KVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTA 513
Query: 445 YGWGMGNGYQLGNGKEDD----ILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
Y WG QLG G +D+ + +P +I L+ Y+++ + QH++I+AK
Sbjct: 514 YAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAK 567
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
R+ ++ R+ F E G PL+ V GV++ ++S+G + G+N + G +
Sbjct: 168 RTTTKKPRKVDIFEEEGLKPLQA-----VAGGVHSAVLTSEGEVYMCGIN---EKGTVPA 219
Query: 270 E-VQKSGNTCFFTPHLIKSLSDK--KFTMLASGQHHSLALNSEGKIYAFG--RHDYGRLG 324
E V+K G+T F + +K K MLA+G + AL +G + A+G R+ G +
Sbjct: 220 EGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVD 279
Query: 325 LKNVSEPVTE-PTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
+ + + E P I + I IA G +D +G L +G G QLG
Sbjct: 280 VHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTK 339
Query: 384 ILNS-------------------------------------------EGKIYAFGRHDYG 400
+ S +GK YAFG ++Y
Sbjct: 340 TIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYA 399
Query: 401 RLGLK 405
+LG+K
Sbjct: 400 QLGIK 404
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 13 AENPS---QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG----PDVMERKTFALV 65
AE P+ ++ FV E V + G V G+ LGLG D + + +
Sbjct: 426 AEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTI 485
Query: 66 EDLD---NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALG 102
++++ +V V ++ +EDG Y WG + G LG
Sbjct: 486 QEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLG 525
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 172/351 (49%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG +
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CQKQTSPQLIKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL E ++T P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G E P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 171/351 (48%), Gaps = 31/351 (8%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E RK+ + V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--RVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V +S G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL G E + P ++S+S IV++A G H + L+ + G + GQLG T
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADS 269
+ + S L +P + G ++ ++ G+I +G N + QLG D
Sbjct: 175 CKKQTSPQLLKSLL---GIPFMQVAAG----GAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
+ + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG + S
Sbjct: 228 NDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 330 EPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ P + L +T IACG S + S G +Y +G+G QLG G
Sbjct: 281 HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 155/361 (42%), Gaps = 52/361 (14%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S G +GL G E I P K + + + G H V + G + T GC
Sbjct: 3 CWGN--ASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLVGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P + SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T IACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 G 471
G
Sbjct: 343 G 343
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQKT-PLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL + ++T P L+S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----- 224
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 281 HE-------INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G ++ QLG D E+ P +K+ + G H++ + +G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEI-------VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I +++CG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P + K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHS 202
Query: 490 VILA 493
+L
Sbjct: 203 FVLT 206
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G +G+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I +++
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVS 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 39 VLTCGQGDTGQLGLG----PDVME-RKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
+L G GQLGLG V+E R++ V V +V G HTV + +DG VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNK--KVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 94 GCNDEGALGREAEGDSEFIPQTVNL-PKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
GCND G LG E Q V L + V ++ G++H++AL + G VYAWG DS G
Sbjct: 59 GCNDLGQLGHEKSRKKP--EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDG 114
Query: 153 SMGLKG-EGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--I 207
+GL+G E + P ++S+S IV++A G H + L+ + G + GQLG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID 174
Query: 208 TQRSASRNARR---GMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQL 264
Q+ S + G+ F++ G ++ ++ G+I +G N + QL
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAA------------GGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 265 GEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
G D + + P+L+KSL +K + G+ H+ AL EG ++ FG YG+LG
Sbjct: 223 GLNDENDR-------YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 325 LKNVSEPVTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+ S + P + L +T +ACG S + S G +Y +G+G QLG G
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 165/392 (42%), Gaps = 65/392 (16%)
Query: 143 AWGSFRDSHGSMGLKG--EGIQKTPLKLESV--SGIVKIASGADHFVMLTSRGNLLTAGC 198
WG+ S+G +GL G E I P + + + + G H V + G + T GC
Sbjct: 3 CWGN--ASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 199 PEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFG 257
+ GQLG R V L ++I V G +T ++ KG + A+G
Sbjct: 61 NDLGQLGHEKSRKKPEQV-----------VALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 258 LNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGR 317
L++ QLG SE C P IKSLSD + +A G +HSLAL+ +++ +G+
Sbjct: 110 LDSDGQLGLQGSE------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
+ YG+LGL + T P I SL +A G SF + G ++GWG QLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 378 NGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
E+D L EG ++ FG YG+LG + S +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 412 TEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P + L +T +ACG S + S G +Y +G+G QLG G + P ++
Sbjct: 284 N-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Query: 471 GKQL-------------NNYTVLQVASGGQHS 489
G + + V ++ SGG S
Sbjct: 343 GNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQS 374
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
G V TCG D GQLG ++ + D N+V V G HT+ L + G+VY WG +
Sbjct: 53 GTVYTCGCNDLGQLG-HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
+G LG + + +P+ + + VQ++ G HS+AL + V+ WG ++ +G +
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG--QNKYGQL 169
Query: 155 GLKGEGIQK--TPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQR 210
GL G QK +P ++S+ GI +++A+G H +LT G + G + GQLG
Sbjct: 170 GL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL---- 224
Query: 211 SASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADS 269
N R + L+ L+ + I + G +T ++ +G + FG Y QLG +
Sbjct: 225 -NDENDRYVPNLLK----SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 270 EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL-NSEGKIYAFGRHDYGRLG 324
+ P + L T +A G+ H+ A S G+IY+FG G+LG
Sbjct: 280 SHE-------INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 253 ILAFGLNNYSQLGEA--DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
+L +G +Y QLG D E+ P +KK + G H++ + +G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEI-------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG 53
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+Y G +D G+LG + + +P + +L + I ++ACG + A
Sbjct: 54 TVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLA------------ 98
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
LN +G++YA+G G+LGL+ E + P I SL D I +AC
Sbjct: 99 --------------LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLNNYTVLQVASGGQHS 489
G S A+ ++ WG QLG G + P I K L +QVA+GG HS
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHS 202
Query: 490 VIL 492
+L
Sbjct: 203 FVL 205
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 312 IYAFGRHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACG-NCVSFAIDSEGVLYGWG 369
+ +G YG+LGL + E V EP +K + + CG F +D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD--------- 51
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+G +Y G +D G+LG + + +P + +L + I ++A
Sbjct: 52 ------------------DGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVA 90
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLG-NGKEDDILEPMKIEGKQLNNYTVLQVASGGQH 488
CG + A++ +G +Y WG+ + QLG G E+ I P I K L++ ++QVA G H
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYH 148
Query: 489 SVILAK 494
S+ L+K
Sbjct: 149 SLALSK 154
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 33/352 (9%)
Query: 39 VLTCGQGDTGQLGLGPD----VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWG 94
+L G GQ G+ + V E + + D +V EV GG H+V L EDG+VYT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD-RSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 95 CNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N +G LG E EG+ P+ + + + ++ G+SHS+AL + G +++WG+ D G
Sbjct: 60 LNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--G 114
Query: 153 SMGL-KGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
+GL E P ++ ++ I++++ G H + L + G T G GQLG +
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD 268
+ + +R S +PL + V G ++F +S G++ +G+NN QLG +D
Sbjct: 175 FPSQASPQRVRSL---EGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 269 SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNV 328
+ ++S P +K L +K ++ G+ H+ L G ++ FG G+LG ++
Sbjct: 227 EKDRES-------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 329 SEPVTEPTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNG 379
++ V P + L +T IACG + A + S G++Y +G G QLG G
Sbjct: 280 NDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 61/399 (15%)
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPE 200
WG + + +GI P +S + ++A G +H V L G + T G
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLN 259
+GQLG +R ++ + G L +HI V G ++ +S +G + ++G
Sbjct: 63 KGQLGH--EREGNKPEQIG---------ALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHD 319
+ QLG +E + P LI+ L+ + ++ G H LAL ++G+ + +G++
Sbjct: 112 SDGQLGLMTTEDSVA------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
+G+LGL P + SL+ + +A G SFA+ G ++GWGM N QLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 380 KEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTE 413
E D +L G ++ FG G+LG ++++ V
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 414 PTPIPSLQDKTITSIACGNCVSFA-IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEG- 471
P + L +T IACG + A + S G++Y +G G QLG G ++ P ++G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Query: 472 ------------KQLNNYTVLQVASGGQHSVILAKPKPN 498
+ + V Q+ SGG + +L N
Sbjct: 345 WAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)
Query: 21 FVTSEAVPTLKCKTGG---------GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV 71
F++ +V + C GG G V TCG GQLG + + + + D ++
Sbjct: 30 FISDRSVKEVAC--GGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD-QHI 86
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAV-QISAGD 129
+ V G H++ L++ G++++WG +G LG DS +P+ + L ++ + Q+S G+
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVM 186
H +AL DG + WG ++SHG +GL E Q +P ++ S+ GI ++A+G H
Sbjct: 147 WHCLALAADGQFFTWG--KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 204
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTGVYNT 245
L+ G + G GQLG ++ P V L R + + + G +T
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRE----------SPCHVKLLRTQKVVYISCGEEHT 254
Query: 246 FISSK-GSILAFGLNNYSQLGE--ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
+ +K G + FG + QLG + EV P + L + T +A G+ H
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------NPRRVLELMGSEVTQIACGRQH 305
Query: 303 SLAL-NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
+LA S G IYAFG G+LG + V P+P+
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPV 341
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 10 RKQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLG---LGPDVMER 59
K E+P + ++ V + C T G V T G G GQLG + +V R
Sbjct: 227 EKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 60 KTFALVEDLDNVVEVVVGGMHTVCLT-EDGKVYTWGCNDEGALG 102
+ L+ V ++ G HT+ G +Y +GC G LG
Sbjct: 287 RVLELMG--SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4013 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4071 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4123 GRLGHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4176 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4226
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4227 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4267
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4322
Query: 497 P 497
P
Sbjct: 4323 P 4323
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 479 NSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 537
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 656
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 714
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 715 VAAGSTHCLALTE 727
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 61/413 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VY+ G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 146 SFRDSHGSMGL-KGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPE 200
++G +GL G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3019 --EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLN 259
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 DGKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 260 NYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGR 317
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 EYGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3180
Query: 318 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 377
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 GDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------ 3233
Query: 378 NGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
DY RLG V +P + L+ K I +A G A
Sbjct: 3234 --------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 438 IDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
+ G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V +CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3126
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3187 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3231
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3232 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3284 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 83/363 (22%)
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
+Q++ + + L +G VY D ++G + IVKIA+ +D
Sbjct: 455 MQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASR----------NIVKIAAHSD 504
Query: 183 --HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT 240
H++ L + G + + GC + G+LG VPL+ + F+
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFS 546
Query: 241 G--------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK 286
G Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVA 599
Query: 287 SLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDL 658
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI-------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 385 ------LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
L + +++++G +D + V++P EPT +P L K I IACG SFA
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIACGPAQSFA 776
Query: 438 IDS 440
S
Sbjct: 777 WSS 779
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4071 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4125
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4126 GHSDSEDQ-------LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4179 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4231
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4232 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4286
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4287 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2953 ESTATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY+ G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3068 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3126 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3226 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3284
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3285 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3318 GSSHSVA 3324
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4113
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + + I+ +GD+ ++ L +D TV++
Sbjct: 4114 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4171 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4229 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4279 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4330
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4331 AQVPMEYNHL 4340
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 551
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 658
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D + + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 711
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EPT +P L K I IAC
Sbjct: 712 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPTALPGLDSKHIVGIAC 769
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 770 GPAQSFAWSS 779
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+Y+ G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3056
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3057 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3106
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3164
Query: 490 VILA 493
LA
Sbjct: 3165 QTLA 3168
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD V++V G ++ LT+
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VIKVRCGSQFSIALTK 675
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 146 S 146
S
Sbjct: 736 S 736
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L +++ G S+AL +DG VY+WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVIKVRCGSQFSIALTKDGQVYSWG- 683
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 684 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 743 FDTLRVTKP-------------EPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLR 788
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 515 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 573 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + ++K+ G+ + LT G + + G + +
Sbjct: 632 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 204 LGRITQ 209
LG T+
Sbjct: 690 LGHGTE 695
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4273
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4274 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 62/421 (14%)
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
G +Y WG N G LG EG +P + VQ+ G+ A+ DG +YA G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQ 201
+ E + TP LES+ + V + SG H + L+S G + + G E
Sbjct: 4011 -YGAGGRLGIGGTESV-STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNY 261
G+LG + R R + L EV +D G ++ +++ G + +G Y
Sbjct: 4069 GKLGHGNRSPCDRP--RVIESLRGIEV------VDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 262 SQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHD 319
+LG +DSE Q P L+++L + +A SG +L L + ++++G D
Sbjct: 4121 GRLGHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 320 YGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
YG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4174 YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG-------- 4224
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
DY RLG + V P + LQ K + +IA G+
Sbjct: 4225 ------------------DYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4265
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEP---MKIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+G +Y WG + QLG+G + I P ++GK++N +VA G H++ + K
Sbjct: 4266 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN-----RVACGSAHTLAWSTSK 4320
Query: 497 P 497
P
Sbjct: 4321 P 4321
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 276 NTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVT 333
N+ P L++ L+ + +A S HH LAL + G++Y++G D GRLG + + P+
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLE 536
Query: 334 EPTPIPSLQDKT----ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD------ 383
EP I + K + IACG+ S AI +EG LY WG GN +LG+G +D
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 384 ----------------------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQ 421
+ G+++++G DYG+LG + S+ P I LQ
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQ 655
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQ 481
D + + CG+ S A+ +G +Y WG G+ +LG+G E+ + P +EG L V+
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVID 713
Query: 482 VASGGQHSVILAK 494
VA+G H + L +
Sbjct: 714 VAAGSTHCLALTE 726
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 59/412 (14%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWG 145
KV+ WG ND+ LG +G +P +T++ VQ++ G A+ +G VYA G
Sbjct: 2960 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLS-ALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIA--SGADHFVMLTSRGNLLTAGCPEQ 201
+ +G+ G P ++ ++S V K+A SG H LT G + + G +
Sbjct: 3018 EATNGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNN 260
G+LG ++ + + +E LK K I D+ G ++ ++S G + +GL
Sbjct: 3077 GKLGHFSRMNCDKP-----RLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH--HSLALNSEGKIYAFGRH 318
Y +LG D NT P ++K L + +A G +LAL EG ++++G
Sbjct: 3128 YGRLGHGD-------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
D+G+LG + SE P I L + + I CG S A+ GV++ WG G
Sbjct: 3181 DFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG------- 3232
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
DY RLG V +P + L+ K I +A G A+
Sbjct: 3233 -------------------DYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G +Y WG + Q GNG +P ++G L + +VA G HSV
Sbjct: 3273 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3322
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 37 GVVLTCGQGDTGQLGLGPDV----MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+ G+LGLG + R+ AL + V V GG H LT DGKV++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDSH 151
WG D+G LG + + + L K ++ I+ G SHS AL G +Y WG
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL----- 3125
Query: 152 GSMGLKGEGIQKTPLKLESVS-----GIVKIASGAD--HFVMLTSRGNLLTAGCPEQGQL 204
G G G G T LK + V ++++A G+ + LT G + + G + G+L
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 205 GR-------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFG 257
GR I Q N +G+ +E G ++ ++ G + +G
Sbjct: 3186 GRGGSEGCNIPQNIERLNG-QGVCQIECG--------------AQFSLALTKSGVVWTWG 3230
Query: 258 LNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
+Y +LG +D V+K P +++ L KK +A G H LA+ G++YA+G
Sbjct: 3231 KGDYFRLGHGSDVHVRK--------PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 317 RHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+D+G+ G + +PT + L+ + IT +ACG+ S A
Sbjct: 3283 DNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 83/362 (22%)
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD- 182
QI+ + + L +G VY D+ ++G + IVKIA+ +D
Sbjct: 455 QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASR----------NIVKIAAHSDG 504
Query: 183 -HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H++ L + G + + GC + G+LG VPL+ + F+G
Sbjct: 505 HHYLALAATGEVYSWGCGDGGRLG------------------HGDTVPLEEPKVISAFSG 546
Query: 242 --------------VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS 287
Y+ I+++G + +G NY +LG SE + P L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-------IPMLVAG 599
Query: 288 LSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT 345
L K +A SG +LA+ G+++++G DYG+LG + S+ P I LQD
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLD 658
Query: 346 ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDI--------------------- 384
+ + CG+ S A+ +G +Y WG G+ +LG+G E+ +
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 385 -----LNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
L + +++++G +D + V++P EP +P L K I IACG SFA
Sbjct: 719 THCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIACGPAQSFAW 776
Query: 439 DS 440
S
Sbjct: 777 SS 778
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 59/414 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVVEV-VVGGMHTV-CLTEDGKVYT 92
G G + G GQLG G + + K E L + V ++GG T+ +T DGK+Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 93 WG---CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G G G E+ + ++ K V +++G H +AL +G VY+WG D
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
G +G P +ES+ GI V +A+G H +T+ G+L T G +G+ GR+
Sbjct: 4069 --GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG---KGRYGRL 4123
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTG---VYNTFISSKGSILAFGLNNYSQ 263
+ L+P V + H + D+ G ++ ++ ++G +Y +
Sbjct: 4124 GHSDSEDQ-------LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 264 LGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRL 323
LG S+ K P I SL+ + G S+AL G +Y +G+ DY RL
Sbjct: 4177 LGRGGSDGCK-------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4229
Query: 324 GLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDD 383
G + V P + LQ K + +IA G+ +G +Y WG + QLG+G
Sbjct: 4230 G-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG---- 4284
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 437
+ + P + +LQ K + +ACG+ + A
Sbjct: 4285 -----------------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 174/427 (40%), Gaps = 69/427 (16%)
Query: 25 EAVPTLKCKTGGGVVLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVC 83
E+ T++ K V G D QLG L ++ +F+ NVV+V G
Sbjct: 2952 ESAATIRTK-----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK----KAVQISAGDSHSVALLEDG 139
+T +GKVY G G LG + IP+ + K V + +G H+ AL DG
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAG 197
V++WG D G +G P +E++ I IA G+ H LTS G L T G
Sbjct: 3067 KVFSWGEGDD--GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 198 CPEQGQLGR---ITQRSASRNARRGMSFLEPGEVPLKRKH-IDDVFTGVYNT---FISSK 250
E G+LG TQ L+P V + H + V G + ++ +
Sbjct: 3125 LGEYGRLGHGDNTTQ-------------LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + ++G ++ +LG SE C P I+ L+ + + G SLAL G
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSE------GCNI-PQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
++ +G+ DY RLG V +P + L+ K I +A G A+ G +Y WG
Sbjct: 3225 VVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 371 GNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 430
+ Q GNG + +PT + L+ + IT +AC
Sbjct: 3284 NDHGQQGNG---------------------------TTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 431 GNCVSFA 437
G+ S A
Sbjct: 3317 GSSHSVA 3323
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 52/310 (16%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G+ + G+LG G P V+E + +E VV+V GG H+ C+T G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIE----VVDVAAGGAHSACVTAAGD 4111
Query: 90 VYTWGCNDEGALGREAEGDSE--FIPQTVNLPK--KAVQIS--AGDSHSVALLEDGTVYA 143
+YTWG +G GR DSE P+ V + + V I+ +GD+ ++ L +D TV++
Sbjct: 4112 LYTWG---KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQ 201
WG +G +G G K P+K++S++ G+VK+ G+ V LT G + T G +
Sbjct: 4169 WGD--GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLN 259
+LG + + RR P +V L+ K + + TG ++ + G + +G N
Sbjct: 4227 HRLG----HGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 260 NYSQLGEADSE-VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN-----SEGKIY 313
+ QLG+ + +Q+ P L+ +L KK +A G H+LA + S GK+
Sbjct: 4277 DEGQLGDGTTNAIQR--------PRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Query: 314 AFGRHDYGRL 323
A +Y L
Sbjct: 4329 AQVPMEYNHL 4338
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 70 NVVEVVV--GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN------LP 119
N+V++ G H + L G+VY+WGC D G LG GD+ + P+ ++
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG---HGDTVPLEEPKVISAFSGKQAG 550
Query: 120 KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI----V 175
K V I+ G ++S A+ +G +Y WG R ++G +G + P+ + + G+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWG--RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 176 KIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHI 235
SG + +T G + + G + G+LGR + + +E K + +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGR-----GGSDGCKTPKLIE------KLQDL 657
Query: 236 DDVFTGVYNTF---ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKK 292
D V + F ++ G + ++G + +LG E + P L++ L KK
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR-------YPKLLEGLQGKK 710
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+A+G H LAL + +++++G +D + V++P EP +P L K I IAC
Sbjct: 711 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKP--EPAALPGLDTKHIVGIAC 768
Query: 352 GNCVSFAIDS 361
G SFA S
Sbjct: 769 GPAQSFAWSS 778
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
+ + +GLN+ QLG K P ++LS +A G A+ E
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
GK+YA G GRLGL S V PIP + IT+++ S+ + V G
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTV----PIP----RQITALS-----SYVVKKVAVHSG-- 3055
Query: 370 MGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
G+ L +GK++++G D G+LG + +P I +L+ K I IA
Sbjct: 3056 ---------GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIA 3105
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHS 489
CG+ S A+ S G LY WG+G +LG+G L+P + K L + V+QVA G + +
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--KVLLGHRVIQVACGSRDA 3163
Query: 490 VILA 493
LA
Sbjct: 3164 QTLA 3167
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P ++E+ ++DLD VV+V G ++ LT+
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-----LQDLD-VVKVRCGSQFSIALTK 674
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWG 145
DG+VY+WG D LG E + L KK + ++AG +H +AL ED V++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 146 S 146
S
Sbjct: 735 S 735
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGG--MHTVCLTEDGK 89
T G + T G+G+ G+LG G E LV L V++V G T+ +TE+G+
Sbjct: 567 TAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 90 VYTWGCNDEGALGR---EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
V++WG D G LGR + + I + +L V++ G S+AL +DG VY+WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL--DVVKVRCGSQFSIALTKDGQVYSWG- 682
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQ- 203
+ + +G E + P LE + G ++ +A+G+ H + LT + + G +Q Q
Sbjct: 683 -KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 204 --LGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTFISSKGSILAFGLN 259
R+T+ EP +P L KHI + G +F S S + GL
Sbjct: 742 FDTLRVTKP-------------EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLR 787
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 37 GVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGK 89
G V + G GD G+LG G P V+ F+ + +VV + G ++ +T +G+
Sbjct: 514 GEVYSWGCGDGGRLGHGDTVPLEEPKVI--SAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTV----NLPKKAVQISAGDSHSVALLEDGTVYAWG 145
+YTWG + G LG + D E IP V L V +GD+ ++A+ E+G V++WG
Sbjct: 572 LYTWGRGNYGRLGHGSSED-EAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 146 SFRDSHGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
+G +G G KTP +E + +VK+ G+ + LT G + + G + +
Sbjct: 631 D--GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 204 LGRITQ 209
LG T+
Sbjct: 689 LGHGTE 694
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D R+ V+ L V+ + G +H VC TEDG+VY
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ-VQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 92 TWGCNDEGALGREAEGDSEFI--PQTVNLP--KKAVQISAGDSHSVA 134
TWG NDEG LG +G + I P+ V KK +++ G +H++A
Sbjct: 4272 TWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 157/356 (44%), Gaps = 33/356 (9%)
Query: 13 AENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKTFAL 64
AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 23 AENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82
Query: 65 VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-EAEGDSEF-IPQTVNLPKKA 122
+ V G HT+ TE GKVY G N+EG LG + E S F + +K
Sbjct: 83 ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKI 142
Query: 123 VQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGAD 182
Q+SAG + S AL EDG ++ WG +S G +GL+ P ++ I I+ G
Sbjct: 143 KQLSAGSNTSAALTEDGELFMWGD--NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYY 200
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H +T+ G L T G PE G+LG Q + P VP + V G
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM--------PQPVPGIPGKVVQVACGG 252
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLASGQ 300
+T + ++ ++ FGL + QLG G F T P I+ + D+K + +A G+
Sbjct: 253 GHTVVLTEKAVYTFGLGQFGQLG--------LGTFLFETSVPKAIEHIKDQKISFIACGE 304
Query: 301 HHSLALNSEGKIYAFGRHDYGR--LGLKNVSEPVTEPTPIPSLQDKTITSIACGNC 354
+H+ + G +Y FG +G+ LGL+N + PT + + ++CG C
Sbjct: 305 NHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFI-PTLCSNFLRFIVQLVSCGGC 359
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 168/378 (44%), Gaps = 55/378 (14%)
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS-GIVKIAS-GAD 182
+S GD H+ + + +Y +GS ++ G +GL + P ++++ VK A+ G +
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGS--NNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H ++ T G + AG +GQLG + R+ +SF ++ I + G
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLG--LGDTEERSTFHLISFF------TSQRKIKQLSAGS 149
Query: 243 YNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
+ ++ G + +G N+ Q+G ++ N C P + K + ++ G +
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIG-----LENVTNVC--VPQQV--TVGKPISWISCGYY 200
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKN---VSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
HS + +EG++Y FG + G+LGL N V+ + P P+P + K + +ACG +
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM--PQPVPGIPGK-VVQVACGGGHTVV 257
Query: 359 IDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 418
+ +E +Y FG +G+LGL + P I
Sbjct: 258 L---------------------------TEKAVYTFGLGQFGQLGLGTFLFETSVPKAIE 290
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
++D+ I+ IACG + I G++Y +G G +LG G E+ + + +
Sbjct: 291 HIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI 350
Query: 479 VLQVASGGQHSVILAKPK 496
V V+ GG H+++ A P+
Sbjct: 351 VQLVSCGGCHTLVFATPR 368
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 33/315 (10%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVA 134
G HT +T + K+Y +G N+ G LG ++ + P V P+K + G +H++
Sbjct: 43 GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKS-TVSKPTCVKALKPEKVKFAACGRNHTLV 101
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL----ESVSGIVKIASGADHFVMLTSR 190
E G VYA G ++ G +GL G+ +++ L S I ++++G++ LT
Sbjct: 102 STEGGKVYAAGG--NNEGQLGL-GDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 191 GNLLTAGCPEQGQLG--RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FI 247
G L G +GQ+G +T + G K I + G Y++ F+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTVG-------------KPISWISCGYYHSAFV 205
Query: 248 SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALN 307
+++G + FG +LG + + P + + K +A G H++ L
Sbjct: 206 TTEGQLYTFGEPECGKLGLPNQLL-----VNHRMPQPVPGIPGK-VVQVACGGGHTVVL- 258
Query: 308 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 367
+E +Y FG +G+LGL + P I ++D+ I+ IACG + I G++Y
Sbjct: 259 TEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYT 318
Query: 368 WGMGNGYQLGNGKED 382
+G G +LG G E+
Sbjct: 319 FGDGRHGKLGLGLEN 333
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 42/233 (18%)
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
T L+ G H+ + K+Y FG +++G+LGL + S V++PT + +L+ + + ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKS-TVSKPTCVKALKPEKVKFAACGR 96
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKEDD---------------------------ILN 386
+ G +Y G N QLG G ++ L
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+G+++ +G + G++GL+NV+ P K I+ I+CG S + +EG LY
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVC---VPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 447 WGMGNGYQLGNGKE----DDILEPMK-IEGKQLNNYTVLQVASGGQHSVILAK 494
+G +LG + + +P+ I GK V+QVA GG H+V+L +
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMPQPVPGIPGK------VVQVACGGGHTVVLTE 260
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 38 VVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGC 95
V T G G GQLGLG + E +E + + + + G HT +T+ G +YT+G
Sbjct: 262 AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGD 321
Query: 96 NDEGALGREAEGDS-EFIPQTV-NLPKKAVQ-ISAGDSHSVAL 135
G LG E + +FIP N + VQ +S G H++
Sbjct: 322 GRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 165/373 (44%), Gaps = 41/373 (10%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLG-PDVMERKTF 62
K AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 21 KFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTC 80
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSE-----FIPQTVN 117
+ V G HT+ TE G VY G N+EG LG GD+E +
Sbjct: 81 VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGL---GDTEERNTFHVISFFT 137
Query: 118 LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI 177
K Q+SAG + S AL EDG ++ WG +S G +GLK P ++ + I
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGD--NSEGQIGLKNVSNVCVPQQVTIGKPVSWI 195
Query: 178 ASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDD 237
+ G H +T+ G L G PE G+LG Q + + +S E+P K +
Sbjct: 196 SCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-----EIPEK---VIQ 247
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTM 295
V G +T + ++ ++ FGL + QLG G F T P +I+++ D+ +
Sbjct: 248 VACGGEHTVVLTENAVYTFGLGQFGQLG--------LGTFLFETSEPKVIENIRDQTISY 299
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGR--LGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
++ G++H+ + G +Y FG +G+ LGL+N + PT + + +ACG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFI-PTLCSNFLRFIVKLVACGG 358
Query: 354 C--VSFAIDSEGV 364
C V FA GV
Sbjct: 359 CHMVVFAAPHRGV 371
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 47/349 (13%)
Query: 175 VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKH 234
V ++ G +H ++T L G GQLG ++ + S+ + L+P +V L
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPT--CVKALKPEKVKL---- 91
Query: 235 IDDVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEVQKSGNT-CFFTPHLIKSLSDKK 292
G +T +S++G ++ A G NN QLG D+E + + + FFT S+ K
Sbjct: 92 ---AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT-------SEHK 141
Query: 293 FTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 352
L++G + S AL +G+++ +G + G++GLKNVS P K ++ I+CG
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCV---PQQVTIGKPVSWISCG 198
Query: 353 NCVSFAIDSEGVLYGWG-------------MGNGY-------------QLGNGKEDDILN 386
S + ++G LY +G +GN Q+ G E ++
Sbjct: 199 YYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL 258
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
+E +Y FG +G+LGL +EP I +++D+TI+ I+CG + I G++Y
Sbjct: 259 TENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
+G G +LG G E+ + + V VA GG H V+ A P
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAP 367
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 180/428 (42%), Gaps = 70/428 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIP---QTVNLPKKAVQISAGDSHSVALLEDGTVYAWGS 146
+Y WG N G LG EG P + ++L + VQ++ G+ A+ DG ++A G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSRIKTPTPCEALSL-LRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGI----VKIASGADHFVMLTSRGNLLTAGCPEQG 202
+G P L S+ + V + SG H + LT+ G + G E G
Sbjct: 4109 GSGGRLGVGGSDS--WAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 203 QLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTG-VYNTFISSKGSILAFGLNN 260
+LG + MS+ P V L + D+ G ++ I++ G +L +G
Sbjct: 4167 KLGHGNR----------MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4216
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRH 318
Y +LG DSE Q P L+++L + +A SG +L + + ++++G
Sbjct: 4217 YGRLGHGDSEDQ-------LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDG 4269
Query: 319 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 378
DYG+LG + S+ P I SL + + CG+ S A+ G +Y WG G
Sbjct: 4270 DYGKLG-RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG------- 4321
Query: 379 GKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAI 438
D+ RLG +V V P + +LQ K I SIA G+ A
Sbjct: 4322 -------------------DFHRLGHGSVDH-VRRPKKVAALQGKKIISIATGSLHCVAC 4361
Query: 439 DSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA----- 493
G +Y WG + QLG+G I P + L +++V G H++ L+
Sbjct: 4362 SDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCGSAHTLALSTSQLS 4419
Query: 494 ---KPKPN 498
+P PN
Sbjct: 4420 ERLRPLPN 4427
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 157/357 (43%), Gaps = 42/357 (11%)
Query: 39 VLTCGQGDTGQLG-LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCND 97
V+ G D QLG L ++ TF+ + + G +++DGKVY G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG--- 3044
Query: 98 EGALGREAEGDSEFIPQTVNLPK------KAVQISAGDSHSVALLEDGTVYAWGSFRDSH 151
EG GR G + +P LP K V + +G H++AL DG V++WG D
Sbjct: 3045 EGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED-- 3102
Query: 152 GSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR--- 206
G +G P +E++ I +A G+ H ++S+G L T G E G+LG
Sbjct: 3103 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 207 ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNT---FISSKGSILAFGLNNYS 262
TQ L+P V L + + V G + ++ G++ ++G ++
Sbjct: 3163 TTQ-------------LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG 3209
Query: 263 QLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+LG SE TPH I+ LS + G SLAL G+++ +G+ DY R
Sbjct: 3210 KLGRGGSEGSD-------TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR 3262
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
LG + V +P PI L+ + + +A G A+ G +Y WG + Q G+G
Sbjct: 3263 LG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 170/390 (43%), Gaps = 57/390 (14%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAG 197
TV WG D GLKG + K P +++S + + IA G+ +++ G + G
Sbjct: 2987 TVMVWG-LNDKEQLGGLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG 3044
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT----GVYNTFISSKGSI 253
G+LG + P ++P+ R+++ G + ++ G +
Sbjct: 3045 EGTNGRLGLGVTHNVPL----------PHQLPVLRQYVVKKVAVHSGGKHALALTLDGKV 3094
Query: 254 LAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
++G +LG + T P L+++L KK +A G HS A++S+G++Y
Sbjct: 3095 FSWGEGEDGKLGHGN-------RTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELY 3147
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMG 371
+G +YGRLG + + + +P + +L + + +ACG + + A+ +G ++ WG G
Sbjct: 3148 TWGLGEYGRLGHGDNTTQL-KPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3206
Query: 372 NGYQLGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLK 405
+ +LG G + L G+++ +G+ DY RLG
Sbjct: 3207 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG-H 3265
Query: 406 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE 465
+ V +P PI L+ + + +A G A+ G +Y WG + Q G+G +
Sbjct: 3266 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK 3325
Query: 466 PMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
P + G L+ V +VA G HS+ P
Sbjct: 3326 PALVIG--LDAVFVNRVACGSSHSIAWGLP 3353
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 156/358 (43%), Gaps = 61/358 (17%)
Query: 37 GVVLTCGQGDTGQLGLGPD---VMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V CG+G G+LGLG + + L + + V V GG H + LT DGKV++W
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097
Query: 94 GCNDEGALGREAEGDSEFI--PQTVNL--PKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G ++G LG G+ + P+ V KK ++ G SHS A+ G +Y WG
Sbjct: 3098 GEGEDGKLG---HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGL--- 3151
Query: 150 SHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGAD--HFVMLTSRGNLLTAGCPEQG 202
G G G G T LK + V+ +V++A G+ + LT G + + G + G
Sbjct: 3152 --GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG 3209
Query: 203 QLGR------ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAF 256
+LGR T R + G+ +E G ++ ++ G + +
Sbjct: 3210 KLGRGGSEGSDTPHEIERLSGIGVVQIECG--------------AQFSLALTRAGEVWTW 3255
Query: 257 GLNNYSQLGE-ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAF 315
G +Y +LG D V+K P I L ++ +A G H LA+ G++YA+
Sbjct: 3256 GKGDYYRLGHGGDQHVRK--------PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 3307
Query: 316 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNG 373
G +D+G+ G N +P + L + +ACG+ S A WG+ N
Sbjct: 3308 GDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA---------WGLPNA 3355
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 156/359 (43%), Gaps = 70/359 (19%)
Query: 107 GDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL 166
G+S +P T++ + Q++ ++ + L ++G +Y W + + PL
Sbjct: 560 GESAGVP-TLSCRFQIKQVACCETQMLILSQEGKLYTWRLAKP------------EAEPL 606
Query: 167 KLESVSGIVKIASGAD----HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSF 222
+E V+ V I+ HF+ + S N + G E +LG +AR
Sbjct: 607 PMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH-----GDTHARA---- 657
Query: 223 LEPGEVPLKRKH-IDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
P ++ +H + V+ G Y+ I+ G++L +G Y++LG +S+ +
Sbjct: 658 -VPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRS------- 709
Query: 281 TPHLIKSLSDKKFT--MLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P L+ +LSD L SG HSLAL SEG ++A+G DYG+LG N + + +P +
Sbjct: 710 LPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSL-QPILV 768
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN--GYQLGNGKEDDILNSEGKIYAFGR 396
SL + + G+ S A+ SEG LY WG G+QL
Sbjct: 769 ESL--PRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL-------------------- 806
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL 455
++ + + P + SLQ K I +A A+ S G ++GWG + Q+
Sbjct: 807 -------VERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 41/304 (13%)
Query: 72 VEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGD 129
V V GG H + LT +G+VY WG ++G LG D + + +N I+ G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLN-GMSVADIACGS 4197
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKI----ASGADHFV 185
+HS A+ G V WG R +G +G Q P +E++ G I SG +
Sbjct: 4198 AHSAAITASGHVLTWGKGR--YGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4255
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV--- 242
+T N+ + G + G+LG RG S + ++P K + + + GV
Sbjct: 4256 CITDDDNVWSWGDGDYGKLG------------RGGS--DGCKLPYKIESLAGL--GVVKV 4299
Query: 243 -----YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
++ ++ G++ +G ++ +LG + + P + +L KK +A
Sbjct: 4300 ECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR-------PKKVAALQGKKIISIA 4352
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSF 357
+G H +A + G++Y +G +D G+LG V+ + P + +LQ K I + CG+ +
Sbjct: 4353 TGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTA-IQRPRLVAALQGKHIVKVTCGSAHTL 4411
Query: 358 AIDS 361
A+ +
Sbjct: 4412 ALST 4415
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 48/233 (20%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
+ +A + L L+ EGK+Y + +++P EP P+ + SIA
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTW-----------RLAKPEAEPLPMEEVAHDVFISIA- 620
Query: 352 GNCVS---FAIDSEGVLYGWGMGNGYQLGNGK-------------EDDILNSE------- 388
G+C AIDS Y WG G ++LG+G E + S
Sbjct: 621 GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYS 680
Query: 389 ------GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG--NCVSFAIDS 440
G + +GR Y RLG N S+ + PT + +L D + +A G + S A+ S
Sbjct: 681 AAITCGGNLLTWGRGTYARLGHGN-SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTS 739
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
EG+++ WG G+ +LGNG + L+P+ +E V +V +G Q SV L+
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP----RVQRVFAGSQFSVALS 788
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 140/317 (44%), Gaps = 41/317 (12%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQIS--A 127
+ +V + L+++GK+YTW R A+ ++E +P + I+
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTW---------RLAKPEAEPLPMEEVAHDVFISIAGHC 623
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFV 185
H +A+ + Y+WG+ D +G + P K+ ++ + + G +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG---V 242
+T GNLLT G +LG + R + L V L + DV G
Sbjct: 682 AITCGGNLLTWGRGTYARLGH------GNSDDRSLPTLV---VALSDHMVVDVALGSGDA 732
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ ++S+G + A+G +Y +LG + +G+ P L++SL + + +G
Sbjct: 733 HSLALTSEGLVFAWGDGDYGKLGNGNC----NGS---LQPILVESL--PRVQRVFAGSQF 783
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPV---TEPTPIPSLQDKTITSIACGNCVSFAI 359
S+AL+SEG++Y +G+ LG + V V + P + SLQ K I +A A+
Sbjct: 784 SVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLAL 841
Query: 360 DSEGVLYGWGMGNGYQL 376
S G ++GWG + Q+
Sbjct: 842 SSSGEVFGWGRNDSQQI 858
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 154/354 (43%), Gaps = 42/354 (11%)
Query: 24 SEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPD---------VMERKTFALVEDLDNVVEV 74
S VPTL C+ V C +T L L + E + + E +V
Sbjct: 562 SAGVPTLSCRFQIKQVACC---ETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHDVFIS 618
Query: 75 VVG---GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN-LPKKAVQ-ISAGD 129
+ G G H + + + Y+WG ++ LG + + +P + L + VQ + G
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLG-HGDTHARAVPTKIAALEQHCVQSVYCGC 677
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIA--SGADHFV 185
S+S A+ G + WG R ++ +G + P + ++S +V +A SG H +
Sbjct: 678 SYSAAITCGGNLLTWG--RGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YN 244
LTS G + G + G+LG + N + + +P + VF G ++
Sbjct: 736 ALTSEGLVFAWGDGDYGKLG-------NGNCNGSLQPILVESLP----RVQRVFAGSQFS 784
Query: 245 TFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSL 304
+SS+G + +G + LG V++S C P L+ SL K+ +A H L
Sbjct: 785 VALSSEGQLYTWG--KATCLGH--QLVERSVQGCS-VPRLVSSLQHKRIVDVAVSVAHCL 839
Query: 305 ALNSEGKIYAFGRHDYGRLGLKNV-SEPVTEPTPIPSLQDKTITSIACGNCVSF 357
AL+S G+++ +GR+D ++ +V SEP+ + SL + IAC + S
Sbjct: 840 ALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSL 893
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTE 86
T G V + G GD G+LG G P +ER + VV++ G ++ LT
Sbjct: 3195 TEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI------GVVQIECGAQFSLALTR 3248
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFI--PQTVN--LPKKAVQISAGDSHSVALLEDGTVY 142
G+V+TWG D LG G + + PQ + ++ + ++ G H +A+ + G VY
Sbjct: 3249 AGEVWTWGKGDYYRLG---HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVY 3305
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFV 185
AWG + HG G + K P + + + ++A G+ H +
Sbjct: 3306 AWGD--NDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3348
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGK 89
C T V + G GD G+LG G + + +E L VV+V G +V LT+ G
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK-IESLAGLGVVKVECGSQFSVALTKSGA 4314
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGTVYAWGSFR 148
VYTWG D LG + + L KK + I+ G H VA + G VY WG
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGD-- 4372
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
+ G +G + P + ++ G IVK+ G+ H + L++
Sbjct: 4373 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V T G+GD +LG G D RK + L V+ V VG +H + +T+ G+VY
Sbjct: 3247 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCLAVTDAGQVY 3305
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVA 134
WG ND G G ++ + L V +++ G SHS+A
Sbjct: 3306 AWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 48/383 (12%)
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPE 200
VY WG+ R HG + G + P S S ++ G + ++ + G +L G
Sbjct: 3999 VYLWGAGR--HGQLAEAGRNVM-VPAAAPSFSQAQQVICGQNCTFVIQANGTVLACG--- 4052
Query: 201 QGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNN 260
+G GR+ Q + + ++ + + + + + + ++ ++ G + ++G +
Sbjct: 4053 EGSYGRLGQ--GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4110
Query: 261 YSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDY 320
Y +LG +S+ Q+ P I++L ++ ++ G HS + S+GK++ FG DY
Sbjct: 4111 YGKLGHGNSDRQRR-------PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDY 4163
Query: 321 GRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVL--------YG-WGMG 371
GRLGL N S P + +L+ I +ACG + A+ ++G + YG G+G
Sbjct: 4164 GRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLG 4222
Query: 372 NGYQLGNGKEDDI------------------LNSEGKIYAFGRHDYGRLGL-KNVSEPVT 412
N + ++ D+ L +G +Y FG+ +GL + +
Sbjct: 4223 NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHN 4280
Query: 413 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGK 472
P IP L I +A G + A+ S G +Y WG + QLG G + + EP + G
Sbjct: 4281 RPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGL 4340
Query: 473 QLNNYTVLQVASGGQHSVILAKP 495
Q N V Q+++G HS P
Sbjct: 4341 QGKN--VRQISAGRCHSAAWTAP 4361
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 29/331 (8%)
Query: 37 GVVLTCGQGDTGQLGLG----PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V CG+G G+LGLG +++ TF + V HT+ T +G+V++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 93 WGCNDEGALGREAEGDSEFIPQTVNLP---KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG D G LG ++ P+ + P K V +SAG HS A+ EDG +Y WG
Sbjct: 482 WGDGDYGKLG-HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG--EG 538
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGN-LLTAGCPEQGQLGRIT 208
G +G + P ++ +S + +++ G+ H + L+ G + + G + G+LG
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH-- 596
Query: 209 QRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEA 267
N +E L+ I V G ++ ++S G + A+G + LG
Sbjct: 597 ---GDTNRVYKPKVIEA----LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 647
Query: 268 DSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
SE P LI+ L+ + ++ G H LAL+ + ++YA+G + G+ G N
Sbjct: 648 SSEATA------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+ P+T+P + L I I+ G S A
Sbjct: 702 STGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 238 VFTGVYNTF-ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTML 296
+ G Y TF IS+ GS+ A G +Y +LG DS Q + F PH S KK +
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR----SIKKVSSS 463
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
H+LA +EG+++++G DYG+LG N S LQ K + ++ G S
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKED---------DI---------------LNSEGK-I 391
A+ +G LY WG G+ +LG+G + DI L+ +G+ +
Sbjct: 524 AAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583
Query: 392 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
++FG D G+LG + + V +P I +LQ I + G+ S A+ S G +Y WG G
Sbjct: 584 WSFGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILA 493
G+ E L P IE +L ++ V+ G H + L+
Sbjct: 643 CLGCGSS-EATALRPKLIE--ELAATRIVDVSIGDSHCLALS 681
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 158/344 (45%), Gaps = 50/344 (14%)
Query: 35 GGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN-VVEVVVGGM----HTVCLTEDGK 89
G VL CG+G G+LG G + + ++ L VV +V H++ LTE G+
Sbjct: 4044 ANGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4102
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSF 147
V++WG D G LG D + P+ + + + VQ+S G HS + DG ++ +G+
Sbjct: 4103 VFSWGDGDYGKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN- 4160
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTA-GCPEQGQL 204
+G +GL +K P ++ ++ G I ++A G +H + +++ G+++ A G + G+L
Sbjct: 4161 -GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV----------YNTFISSKGSIL 254
G + S P ++ DV G+ ++ ++ G +
Sbjct: 4220 GLGNSTAKS----------SPQKI--------DVLCGIGIKKVACGTQFSVALTKDGHVY 4261
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYA 314
FG + L E + P I L+ +A G H+LAL S G +YA
Sbjct: 4262 TFGQDRLIGLPEGRARNHNR-------PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYA 4314
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFA 358
+G + G+LGL + + V EPT + LQ K + I+ G C S A
Sbjct: 4315 WGSNSEGQLGLGHTNH-VREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 180/417 (43%), Gaps = 63/417 (15%)
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTV 141
++E +VY WG N L EG E I Q P A I AG + + DG+V
Sbjct: 368 VSETCEVYVWGSNSSHQL---VEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKL--ESVSGIVKIAS--GAD-HFVMLTSRGNLLTA 196
A G + S+G +GL Q T KL E I K++S G+D H + T+ G + +
Sbjct: 425 RACG--KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILA 255
G + G+LG ++ + L G PL+ K + V G ++ ++ G +
Sbjct: 483 GDGDYGKLGH------GNSSTQKYPKLIQG--PLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK-IYA 314
+G ++ +LG DS + P L+K +S+ ++ G H++AL+ +G+ +++
Sbjct: 535 WGEGDFGRLGHGDSNSRN-------IPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWS 585
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY 374
FG D G+LG + + V +P I +LQ I + G+ S A+ S G +Y WG G
Sbjct: 586 FGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--- 641
Query: 375 QLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCV 434
LG + P I L I ++ G+
Sbjct: 642 -------------------------ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH 676
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKED-DILEPMKIEGKQLNNYTVLQVASGGQHSV 490
A+ + +Y WG + Q G G I +P K+ G L+ + Q+++G HS+
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG--LDGIAIQQISAGTSHSL 731
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 26/282 (9%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGKVY 91
T G V + G GD G+LG G +R+ +E L + VV++ G H+ +T DGK++
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQ-IEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAV-QISAGDSHSVALLEDGTVYAWGSFRDS 150
T+G D G LG + + + L + Q++ G +H++A+ DG++ W
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VWAFGDGD 4215
Query: 151 HGSMGLKGEGIQKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRIT 208
+G +GL + +P K++ + GI K+A G V LT G++ T G Q +L +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG---QDRLIGLP 4272
Query: 209 QRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
+ A RN R P ++P L I+DV G +T ++S G + A+G N+ QLG
Sbjct: 4273 EGRA-RNHNR------PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ + P L+ L K +++G+ HS A +
Sbjct: 4326 GHTNHVRE-------PTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 41/251 (16%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+S + +G N+ QL E E P L S SD + + +GQ+ +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEK-------ILQPKLAPSFSDAQ--TIEAGQYCTFV 417
Query: 306 LNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
++++G + A G+ YGRLGL N + + T P K ++S + + A +EG
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 477
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 423
++ WG G DYG+LG N S LQ K
Sbjct: 478 EVFSWGDG--------------------------DYGKLGHGNSSTQKYPKLIQGPLQGK 511
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+ ++ G S A+ +G LY WG G+ +LG+G + P + K ++N V +V+
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN--VGEVS 567
Query: 484 SGGQHSVILAK 494
G H++ L+K
Sbjct: 568 CGSSHTIALSK 578
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTE 86
T+ G V + G GD G+LG G D ++E L + +V G ++ LT
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLEDGTVYAW 144
G+VY WGC LG + + P+ + + V +S GDSH +AL D VYAW
Sbjct: 632 TGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAW 689
Query: 145 GSFRDSHGSMGLKGEGIQKTPL-KLESVSG-----IVKIASGADHFVMLTS 189
G + SMG G+G P+ K + VSG I +I++G H + T+
Sbjct: 690 G-----NNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 29 TLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD-----NVVEVVVGGMHTVC 83
TL G +V G GD G+LGLG + + +D + +V G +V
Sbjct: 4198 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP----QKIDVLCGIGIKKVACGTQFSVA 4253
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTV 141
LT+DG VYT+G + L E + PQ + + + ++ G H++AL +G V
Sbjct: 4254 LTKDGHVYTFGQDRLIGLP-EGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDV 4312
Query: 142 YAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTS 189
YAWGS +S G +GL + P + + G + +I++G H T+
Sbjct: 4313 YAWGS--NSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 44/245 (17%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+G + ++ G + +G N YSQLG + N H+ +LS+K+ +A G
Sbjct: 107 SGPHIVLATTDGEVFTWGHNAYSQLGNGTT------NHGLVPCHISTNLSNKQVIEVACG 160
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP-----SLQDKTITSIACGNC 354
+HSL L S+G+++A+G ++ G++G + T PIP LQ+K + SIACG
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVGSGS-----TANQPIPRRVTGCLQNKVVMSIACGQM 215
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSE 388
S A+ G +Y WG QLG G + +L E
Sbjct: 216 CSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE 275
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGW 447
G+IYA+G + YG+LG N S + PTP+ +D+ I AC + + A S+ G +Y W
Sbjct: 276 GQIYAWGANSYGQLGTGNKSNQ-SYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMW 334
Query: 448 GMGNG 452
G G
Sbjct: 335 GQCRG 339
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLT 85
P + T G V T G QLG G + +L N V+EV G H++ LT
Sbjct: 109 PHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQ-ISAGDSHSVALLEDGTVY 142
DG+V+ WG N+ G +G + + IP+ V L K V I+ G S+A+++ G VY
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQP-IPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVY 227
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPE 200
WG + +G +GL G Q TP ++ ++ GI ++A G H ++LT G + G
Sbjct: 228 VWG--YNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 201 QGQLG 205
GQLG
Sbjct: 286 YGQLG 290
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 147/330 (44%), Gaps = 28/330 (8%)
Query: 55 DVMERKTFALV--EDLDNVVEVVV---GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS 109
DV + F+L E+L + + V G + T + +++ G N G LG + S
Sbjct: 27 DVGKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGV-GDIQS 85
Query: 110 EFIPQTVN--LPKKAVQISAGD-SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL 166
P+ ++ KK +S G H V DG V+ WG S G G+ +
Sbjct: 86 TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHI 145
Query: 167 KLE-SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
S ++++A G+ H ++LTS G + G GQ+G + +A++ R ++
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGC-- 201
Query: 226 GEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
L+ K + + G + + + G + +G N QLG S Q TP
Sbjct: 202 ----LQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQP-------TPCR 250
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
+ +L + +A G H+L L EG+IYA+G + YG+LG N S + PTP+ +D+
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ-SYPTPVVVEKDR 309
Query: 345 TITSIACGNCVSFAIDSE-GVLYGWGMGNG 373
I AC + + A S+ G +Y WG G
Sbjct: 310 IIEIAACHSAHTSAAKSQGGHVYMWGQCRG 339
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 48/254 (18%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHS 303
+ + I G N LG D +Q + P + SL+ KK L+ SG H
Sbjct: 60 YTTVNDEIFVLGTNCSGCLGVGD--IQST-----IEPRRLDSLTGKKIASLSYGSGPHIV 112
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LA ++G+++ +G + Y +LG + + +L +K + +ACG+ S
Sbjct: 113 LA-TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL------ 165
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP----- 418
+L S+G+++A+G ++ G++G + T PIP
Sbjct: 166 --------------------VLTSDGEVFAWGYNNSGQVGSGS-----TANQPIPRRVTG 200
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
LQ+K + SIACG S A+ G +Y WG QLG G + P ++ L
Sbjct: 201 CLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAA--LQGIR 258
Query: 479 VLQVASGGQHSVIL 492
V +VA G H+++L
Sbjct: 259 VQRVACGYAHTLVL 272
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGLG + T V L V V G HT+ LT++G++Y WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH--SVALLEDGTVYAWGSFR 148
N G LG + + + V + ++I+A S S A + G VY WG R
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCR 338
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 159/359 (44%), Gaps = 35/359 (9%)
Query: 11 KQAENPSQKVFVTSEAVPTLKC-------KTGGGVVLTCGQGDTGQLGLGPD-VMERKTF 62
K AEN K + ++ L C TG + G + GQLGLG + + T
Sbjct: 21 KFAENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTC 80
Query: 63 ALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-PKK 121
+ V G HT+ T+ G VY G N+EG LG D + Q V P
Sbjct: 81 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD 140
Query: 122 AV-QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASG 180
+ Q+SAG + S AL EDG ++ WG +S G +GL+ + P ++ I I+ G
Sbjct: 141 TIKQLSAGANTSAALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 198
Query: 181 ADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS-RNARRGMSFLEPGEVPLKRKHIDDVF 239
H +T G L T G PE G+LG + + R+ +R + E + V
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE---------RVIQVA 249
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT--PHLIKSLSDKKFTMLA 297
G +T + ++ + AFGL + QLG G F T P +I+ + D+K ++
Sbjct: 250 CGGGHTVVLTEKVVYAFGLGQFGQLG--------LGTFLFETSEPKIIERIKDQKICHIS 301
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNC 354
G++H+ + G +Y FG +G+LGL +N + PT + + IACG C
Sbjct: 302 CGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFF-PTLCSNFLRFAVQLIACGGC 359
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 164/389 (42%), Gaps = 54/389 (13%)
Query: 117 NLPKK-------AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLE 169
N+P K + +S GD H+ + + +Y +GS +G K I+ T +K
Sbjct: 25 NIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKAL 84
Query: 170 SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP 229
+ A G +H ++ T G + AG +GQLG + R+ + F P +
Sbjct: 85 KPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLG--LGDTDDRDTFHQIVFFTPADT- 141
Query: 230 LKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL 288
I + G + ++ G + +G N+ Q+G ++ N C PH +
Sbjct: 142 -----IKQLSAGANTSAALTEDGKLFMWGDNSEGQIG-----LEDKSNVCI--PHEV--T 187
Query: 289 SDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN-VSEPVTEPTPIPSLQDKTIT 347
K + ++ G +HS + +G++Y FG + G+LGL N + P + + ++ I
Sbjct: 188 VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVI- 246
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNV 407
+ACG + + +E V+Y +G+G +G+LGL
Sbjct: 247 QVACGGGHTVVL-TEKVVYAFGLGQ--------------------------FGQLGLGTF 279
Query: 408 SEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPM 467
+EP I ++D+ I I+CG + + G+LY +G G +LG G E+ +
Sbjct: 280 LFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFF 339
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAKPK 496
+ V +A GG H ++ A P+
Sbjct: 340 PTLCSNFLRFAVQLIACGGCHMLVFATPR 368
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 27/312 (8%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVA 134
G HT +T + K+Y +G N+ G LG ++ + P + P+K + G +H++
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKA-AIIKPTCIKALKPEKVKLAACGRNHTLV 101
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL---ESVSGIVKIASGADHFVMLTSRG 191
+ G VYA G ++ G +GL + T ++ I ++++GA+ LT G
Sbjct: 102 STDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDG 159
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSK 250
L G +GQ+G + + P EV + K I + G Y++ F++
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCI----------PHEVTVG-KPISWISCGYYHSAFVTMD 208
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G + FG +LG + + +P + + ++ +A G H++ L +E
Sbjct: 209 GELYTFGEPENGKLGLPNELLMNHR-----SPQRVLGIPER-VIQVACGGGHTVVL-TEK 261
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+YAFG +G+LGL +EP I ++D+ I I+CG + + G+LY +G
Sbjct: 262 VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGD 321
Query: 371 GNGYQLGNGKED 382
G +LG G E+
Sbjct: 322 GRHGKLGLGMEN 333
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 44/245 (17%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+G + ++ G + +G N YSQLG + N H+ +LS+K+ +A G
Sbjct: 107 SGPHIVLATTDGEVFTWGHNAYSQLGNGTT------NHGLVPCHISTNLSNKQVIEVACG 160
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP-----SLQDKTITSIACGNC 354
+HSL L S+G+++A+G ++ G++G + T PIP LQ+K + +IACG
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVGSGS-----TANQPIPRRVTGCLQNKVVMNIACGQM 215
Query: 355 VSFAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSE 388
S A+ G +Y WG QLG G + +L E
Sbjct: 216 CSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE 275
Query: 389 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGW 447
G+IYA+G + YG+LG N S + PTP+ +D+ I AC + + A ++ G +Y W
Sbjct: 276 GQIYAWGANSYGQLGTGNKSNQ-SYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMW 334
Query: 448 GMGNG 452
G G
Sbjct: 335 GQCRG 339
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLT 85
P + T G V T G QLG G + +L N V+EV G H++ LT
Sbjct: 109 PHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAV-QISAGDSHSVALLEDGTVY 142
DG+V+ WG N+ G +G + + IP+ V L K V I+ G S+A+++ G VY
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQP-IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVY 227
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPE 200
WG + +G +GL G Q TP ++ ++ GI ++A G H ++LT G + G
Sbjct: 228 VWG--YNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 201 QGQLG 205
GQLG
Sbjct: 286 YGQLG 290
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 148/330 (44%), Gaps = 28/330 (8%)
Query: 55 DVMERKTFALV--EDLDNVVEVVV---GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS 109
DV + F+L E+L + + V G + T + +++ G N G LG + S
Sbjct: 27 DVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGV-GDIQS 85
Query: 110 EFIPQTVN--LPKKAVQISAGD-SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPL 166
P+ ++ KK +S G H V DG V+ WG S G G+ +
Sbjct: 86 TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHI 145
Query: 167 KLE-SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEP 225
S ++++A G+ H ++LTS G + G GQ+G + +A++ R ++
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGC-- 201
Query: 226 GEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHL 284
L+ K + ++ G + + + G + +G N QLG S Q TP
Sbjct: 202 ----LQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQP-------TPCR 250
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
+ +L + +A G H+L L EG+IYA+G + YG+LG N S + PTP+ +D+
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ-SYPTPVVVEKDR 309
Query: 345 TITSIACGNCVSFAIDSE-GVLYGWGMGNG 373
I AC + + A ++ G +Y WG G
Sbjct: 310 IIEIAACHSAHTSAAKTQGGHVYMWGQCRG 339
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 48/254 (18%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHS 303
+ + I G N LG D +Q + P + SL+ KK L+ SG H
Sbjct: 60 YTTVNDEIFVLGTNCSGCLGVGD--IQST-----IEPRRLDSLTGKKIASLSYGSGPHIV 112
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LA ++G+++ +G + Y +LG + + +L +K + +ACG+ S
Sbjct: 113 LA-TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL------ 165
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP----- 418
+L S+G+++A+G ++ G++G + T PIP
Sbjct: 166 --------------------VLTSDGEVFAWGYNNSGQVGSGS-----TANQPIPRRVTG 200
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYT 478
LQ+K + +IACG S A+ G +Y WG QLG G + P ++ L
Sbjct: 201 CLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAA--LQGIR 258
Query: 479 VLQVASGGQHSVIL 492
V +VA G H+++L
Sbjct: 259 VQRVACGYAHTLVL 272
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGLG + T V L V V G HT+ LT++G++Y WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSH--SVALLEDGTVYAWGSFR 148
N G LG + + + V + ++I+A S S A + G VY WG R
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCR 338
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 34/295 (11%)
Query: 190 RGNLLTAGCPEQGQLGR---ITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---V 242
+G LL G +GR Q++A RN G + P L + V +G
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNL--GQNLWGPHRYGCLSGVRVRTVVSGSCAA 158
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ I+++G + ++G N QLG D++ ++ P LI++LS + + A G++H
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-------PRLIEALSHEAIVLAACGRNH 211
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+LAL G ++AFG + G+LGL N ++ V P I + IT +ACG S +D +
Sbjct: 212 TLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCK 270
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG-RHDYG------RLGLKNVSEPVTEPT 415
G LY +G QLG+ NS+GK A R +Y R+ + +
Sbjct: 271 GNLYSFGCPEYGQLGH-------NSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQIL 323
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
P+P++ + +ACG + +DS+ ++ WG G +LG+ ++ D + P ++
Sbjct: 324 PVPNV---VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK 375
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 43/322 (13%)
Query: 72 VEVVVGG---MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVN-LPKKAVQI 125
V VV G H++ +T +GK+++WG N++G LG GD++ + P+ + L +A+ +
Sbjct: 148 VRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG---HGDTKRVEAPRLIEALSHEAIVL 204
Query: 126 SA-GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
+A G +H++AL + G+V+A+G + +G + + + + + I K+A GA+
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFS 264
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNA-----------RRGMSFLEPGE----VP 229
+++ +GNL + GCPE GQLG + A RR F+E + +P
Sbjct: 265 MLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP 324
Query: 230 LKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-- 286
+ + DV G +T + S+ + ++G Y +LG A+ + + P L+K
Sbjct: 325 VPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE-------MVPRLVKLF 377
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+ T + +G S A++ G ++ +G + R E P + L I
Sbjct: 378 DFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSR-------ESTMYPKAVQDLCGWRI 430
Query: 347 TSIACG-NCVSFAIDSEGVLYG 367
S+ACG + + A D + +G
Sbjct: 431 RSLACGKSSIIVAADESTISWG 452
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL----PKKAVQIS 126
V +V G HT+ L +V++WG G LG AE E +P+ V L + A QI
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLG-HAEQKDEMVPRLVKLFDFPGRGATQIY 388
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF 184
AG + S A+ E G ++ WG+ S S P ++ + G I +A G
Sbjct: 389 AGYTCSFAVSEVGGLFFWGATNTSREST--------MYPKAVQDLCGWRIRSLACGKSSI 440
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
++ + P G+LG + S A + + L+
Sbjct: 441 IVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 40/243 (16%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+G + +++G + +G N YSQLG + N H+ +LS+K+ +A G
Sbjct: 107 SGPHIVLATTEGEVFTWGHNAYSQLGNGTT------NHGLVPCHISTNLSNKQVIEVACG 160
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP---IPSLQDKTITSIACGNCVS 356
+HSL L S+G+++A+G ++ G++G V +P P LQ+K + +IACG
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCC 217
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGK 390
A+ G +Y WG QLG G + +L EG+
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGWGM 449
+YA+G + YG+LG N S + PTP+ +D+ I AC + + A ++ G +Y WG
Sbjct: 278 VYAWGANSYGQLGTGNKSNQ-SYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Query: 450 GNG 452
G
Sbjct: 337 CRG 339
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLT 85
P + T G V T G QLG G + +L N V+EV G H++ LT
Sbjct: 109 PHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVN---LPKKAVQISAGDSHSVALLEDGTVY 142
DG+V+ WG N+ G +G + + IP+ V K V I+ G +A+++ G VY
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQP-IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPE 200
WG + +G +GL G Q TP ++ ++ GI ++A G H ++LT G + G
Sbjct: 228 VWG--YNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 201 QGQLG 205
GQLG
Sbjct: 286 YGQLG 290
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHS 303
+ + I G N LG D VQ + P + SL+ KK L+ SG H
Sbjct: 60 YTTVNDEIFVLGTNCCGCLGLGD--VQST-----IEPRRLDSLNGKKIACLSYGSGPHIV 112
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LA +EG+++ +G + Y +LG + + +L +K + +ACG+ S
Sbjct: 113 LA-TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL------ 165
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP---IPSL 420
+L S+G+++A+G ++ G++G V +P P L
Sbjct: 166 --------------------VLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCL 202
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
Q+K + +IACG A+ G +Y WG QLG G + P ++ L V
Sbjct: 203 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA--LQGIRVQ 260
Query: 481 QVASGGQHSVIL 492
+VA G H+++L
Sbjct: 261 RVACGYAHTLVL 272
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV--NLP-KKAVQISAGDSHSVA 134
G H V T +G+V+TWG N LG + +P + NL K+ ++++ G HS+
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGN-GTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRG 191
L DG V+AWG ++ G +G Q P ++ +V IA G + + G
Sbjct: 167 LTSDGEVFAWG--YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTG 224
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSK 250
+ G GQLG + R L+ + V G +T + + +
Sbjct: 225 EVYVWGYNGNGQLGLGNSGNQPTPCRVA---------ALQGIRVQRVACGYAHTLVLTDE 275
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE- 309
G + A+G N+Y QLG + N + TP ++ D+ + A H+ A ++
Sbjct: 276 GQVYAWGANSYGQLGTGN-----KSNQSYPTPVTVE--KDRIIEIAACHSTHTSAAKTQG 328
Query: 310 GKIYAFGR 317
G +Y +G+
Sbjct: 329 GHVYMWGQ 336
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V G ++GQ+G G V + + L N VV + G M + + + G+VY
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N G LG G+ + L VQ ++ G +H++ L ++G VYAWG+ +S
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA--NS 285
Query: 151 HGSMGLKGEGIQK--TPLKLESVSGIVKIAS 179
+G +G + Q TP+ +E I++IA+
Sbjct: 286 YGQLGTGNKSNQSYPTPVTVEK-DRIIEIAA 315
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGLG + + T V L V V G HT+ LT++G+VY WG
Sbjct: 224 GEVYVWGYNGNGQLGLG-NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDS--HSVALLEDGTVYAWGSFR 148
N G LG + + + P V + K + ++I+A S S A + G VY WG R
Sbjct: 283 ANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR 338
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 40/243 (16%)
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASG 299
+G + +++G + +G N YSQLG + N H+ +LS+K+ +A G
Sbjct: 107 SGPHIVLATTEGEVFTWGHNAYSQLGNGTT------NHGLVPCHISTNLSNKQVIEVACG 160
Query: 300 QHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP---IPSLQDKTITSIACGNCVS 356
+HSL L S+G+++A+G ++ G++G V +P P LQ+K + +IACG
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCC 217
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGK 390
A+ G +Y WG QLG G + +L EG+
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGWGM 449
+YA+G + YG+LG N S + PTP+ +D+ I AC + + A ++ G +Y WG
Sbjct: 278 VYAWGANSYGQLGTGNKSNQ-SYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Query: 450 GNG 452
G
Sbjct: 337 CRG 339
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLT 85
P + T G V T G QLG G + +L N V+EV G H++ LT
Sbjct: 109 PHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVN---LPKKAVQISAGDSHSVALLEDGTVY 142
DG+V+ WG N+ G +G + + IP+ V K V I+ G +A+++ G VY
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQP-IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 143 AWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPE 200
WG + +G +GL G Q TP ++ ++ GI ++A G H ++LT G + G
Sbjct: 228 VWG--YNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 201 QGQLG 205
GQLG
Sbjct: 286 YGQLG 290
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 246 FISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA--SGQHHS 303
+ + I G N LG D VQ + P + SL+ KK L+ SG H
Sbjct: 60 YTTVNDEIFVLGTNCCGCLGLGD--VQST-----IEPRRLDSLNGKKIACLSYGSGPHIV 112
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
LA +EG+++ +G + Y +LG + + +L +K + +ACG+ S
Sbjct: 113 LA-TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL------ 165
Query: 364 VLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP---IPSL 420
+L S+G+++A+G ++ G++G V +P P L
Sbjct: 166 --------------------VLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCL 202
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
Q+K + +IACG A+ G +Y WG QLG G + P ++ L V
Sbjct: 203 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA--LQGIRVQ 260
Query: 481 QVASGGQHSVIL 492
+VA G H+++L
Sbjct: 261 RVACGYAHTLVL 272
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV--NLP-KKAVQISAGDSHSVA 134
G H V T +G+V+TWG N LG + +P + NL K+ ++++ G HS+
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGN-GTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 135 LLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRG 191
L DG V+AWG ++ G +G Q P ++ +V IA G + + G
Sbjct: 167 LTSDGEVFAWG--YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTG 224
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI-SSK 250
+ G GQLG + R L+ + V G +T + + +
Sbjct: 225 EVYVWGYNGNGQLGLGNSGNQPTPCRVA---------ALQGIRVQRVACGYAHTLVLTDE 275
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE- 309
G + A+G N+Y QLG + N + TP ++ D+ + A H+ A ++
Sbjct: 276 GQVYAWGANSYGQLGTGN-----KSNQSYPTPVTVE--KDRIIEIAACHSTHTSAAKTQG 328
Query: 310 GKIYAFGR 317
G +Y +G+
Sbjct: 329 GHVYMWGQ 336
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVY 91
T G V G ++GQ+G G V + + L N VV + G M + + + G+VY
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGDSHSVALLEDGTVYAWGSFRDS 150
WG N G LG G+ + L VQ ++ G +H++ L ++G VYAWG+ +S
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA--NS 285
Query: 151 HGSMGLKGEGIQK--TPLKLESVSGIVKIAS 179
+G +G + Q TP+ +E I++IA+
Sbjct: 286 YGQLGTGNKSNQSYPTPVTVEK-DRIIEIAA 315
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGLG + + T V L V V G HT+ LT++G+VY WG
Sbjct: 224 GEVYVWGYNGNGQLGLG-NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDS--HSVALLEDGTVYAWGSFR 148
N G LG + + + P V + K + ++I+A S S A + G VY WG R
Sbjct: 283 ANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR 338
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 40/280 (14%)
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYN--TFISSKGSILAFGLNNYSQLGEADSEVQKSGNT 277
+ L P E RK VF N +++ + FGLN + LG D N
Sbjct: 10 FTLLSPQEAGSIRKAC--VFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGD-------NQ 60
Query: 278 CFFTPHLIKSLSDKKFTMLASGQ-HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPT 336
P +++L KK L+ G H L +G +YA+G + Y +LG ++ +
Sbjct: 61 STLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQ 120
Query: 337 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---------KEDDILNS 387
+L K + +ACG+ S A+ ++G L+ WG N Q+G+G K + L++
Sbjct: 121 VCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHT 180
Query: 388 E------------------GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 429
+ G++Y +G + G+LGL N +T P + +L + I
Sbjct: 181 KRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGMCVNQIV 239
Query: 430 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
CG + A+ EG+LY WG QLG G ++++L P +I
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLT 85
P + T GVV G QLG G + +L V+EV G H++ L
Sbjct: 85 PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA 144
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYA 143
DG+++ WG N+ G +G + + + N K+ V I+ G + S+A+L+ G VY
Sbjct: 145 ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYG 204
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQ 201
WG + +G +GL G Q TP+++ ++ G+ +I G H + LT G L G
Sbjct: 205 WG--YNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
GQLG + S+N + L P ++ ++++ + ++
Sbjct: 263 GQLG-----TGSKN-----NLLSPTQIMVEKERVIEI 289
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 27/248 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
G H + TEDG VY WG N LG +G + T L K+ ++++ G HS+AL
Sbjct: 84 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV---SGIVKIASGADHFVMLTSRGN 192
DG ++AWG ++ G +G Q TP K+ + +V IA G + + G
Sbjct: 144 AADGELFAWG--YNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGE 201
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSK 250
+ G GQLG N + L P V L ++ + G +T ++ +
Sbjct: 202 VYGWGYNGNGQLG------LGNNGNQ----LTPVRVAALHGMCVNQIVCGYAHTLALTDE 251
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE- 309
G + A+G N Y QLG S N +P I ++ + A H+ A ++
Sbjct: 252 GLLYAWGANTYGQLGTG------SKNN-LLSPTQIMVEKERVIEIAACHSTHTSAAKTQG 304
Query: 310 GKIYAFGR 317
G +Y +G+
Sbjct: 305 GHVYMWGQ 312
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGLG + + T V L V ++V G HT+ LT++G +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNN-GNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDS--HSVALLEDGTVYAWGSFR 148
N G LG ++ + Q + ++ ++I+A S S A + G VY WG R
Sbjct: 259 ANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
Query: 220 MSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCF 279
+ L P E+ RK + +++ + FGLN + LG D N
Sbjct: 10 FTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGD-------NQST 62
Query: 280 FTPHLIKSLSDKKFTMLASGQ-HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P ++ L KK L+ G H L +G +YA+G + Y +LG ++ +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG---------KEDDILN--- 386
+L K + +ACG+ S A+ ++G ++ WG N Q+G+G K + L+
Sbjct: 123 TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR 182
Query: 387 ---------------SEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG 431
G++Y +G + G+LGL N +T P + +L + I CG
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVNQIVCG 241
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
+ A+ EG+LY WG QLG G ++++L P I
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 28 PTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLT 85
P + T GVV G QLG G + +L VVEV G H++ L
Sbjct: 85 PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALA 144
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL--PKKAVQISAGDSHSVALLEDGTVYA 143
DG+V+ WG N+ G +G + + + N K+ V I+ G + S+A+L++G VY
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204
Query: 144 WGSFRDSHGSMGLKGEGIQKTPLKLESVSGIV--KIASGADHFVMLTSRGNLLTAGCPEQ 201
WG + +G +GL G Q TP+++ ++ + +I G H + LT G L G
Sbjct: 205 WG--YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 202 GQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDV 238
GQLG + ++N + L P + ++++ + ++
Sbjct: 263 GQLG-----TGNKN-----NLLSPAHIMVEKERVVEI 289
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 27/248 (10%)
Query: 78 GMHTVCLTEDGKVYTWGCNDEGALGR--EAEGDSEFIPQTVNLPKKAVQISAGDSHSVAL 135
G H + TEDG VY WG N LG +G + T L K+ V+++ G HS+AL
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLES---VSGIVKIASGADHFVMLTSRGN 192
DG V+AWG ++ G +G Q TP K+ + + +V IA G + + G
Sbjct: 144 AADGEVFAWG--YNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 193 LLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTGVYNTF-ISSK 250
+ G GQLG N + L P V L ++ + G +T ++ +
Sbjct: 202 VYGWGYNGNGQLG------LGNNGNQ----LTPVRVAALHSVCVNQIVCGYAHTLALTDE 251
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE- 309
G + A+G N Y QLG + +P I ++ + A H+ A ++
Sbjct: 252 GLLYAWGANTYGQLGTGNKNN-------LLSPAHIMVEKERVVEIAACHSAHTSAAKTQG 304
Query: 310 GKIYAFGR 317
G +Y +G+
Sbjct: 305 GHVYMWGQ 312
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTWG 94
G V G GQLGLG + + T V L +V ++V G HT+ LT++G +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNN-GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPK-KAVQISAGDSH--SVALLEDGTVYAWGSFR 148
N G LG ++ P + + K + V+I+A S S A + G VY WG R
Sbjct: 259 ANTYGQLGT-GNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCR 314
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 154/331 (46%), Gaps = 53/331 (16%)
Query: 69 DNVVEVVVGG---MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPKKAV 123
D V VV G H++ +T +GK+++WG ND+G LG GD++ + P+ + + V
Sbjct: 120 DVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGH---GDTKRLEAPKLIEGLGEEV 176
Query: 124 QISA--GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK----TPLKLE-SVSGIVK 176
++A G +H++AL E+GTVY +G +G G+G Q +P ++ + IVK
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFG-----ENKLGQLGQGNQTDAVLSPATIQYNGQPIVK 231
Query: 177 IASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNA-----------RRGMSFLEP 225
+A GA+ +++ +GNL + GCPE GQLG + A RR F+E
Sbjct: 232 VACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEK 291
Query: 226 ---GEV-PLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFF 280
G+V P+ DV G +T + S+ + ++G Y +LG A+ + +
Sbjct: 292 TKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE-------M 344
Query: 281 TPHLIK--SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
P L+K + T + G S AL+ G ++ +G + R E P +
Sbjct: 345 VPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR-------ESTMYPKAV 397
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWG 369
L I S+ACG S + ++ WG
Sbjct: 398 QDLCGWKIRSLACGKS-SIIVAADDSTISWG 427
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 34/319 (10%)
Query: 190 RGNLLTAGCPEQGQLGRI---TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG---V 242
+G LL G +GR Q++A RN G + P L + V +G
Sbjct: 76 KGQLLIFGATNWDLIGRKEVPKQQAAFRNL--GQNLWGPHRYGCLSDVQVSCVVSGPCAA 133
Query: 243 YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHH 302
++ I+++G + ++G N+ QLG D++ ++ P LI+ L ++ A G++H
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEA-------PKLIEGLGEEVIVAAACGRNH 186
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
+LAL G +Y FG + G+LG N ++ V P I + I +ACG S +D +
Sbjct: 187 TLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATI-QYNGQPIVKVACGAEFSMIVDCK 245
Query: 363 GVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFG-RHDYGRLGLKNVSEPVTEPT------ 415
G LY +G QLG+ NS+GK A R ++ + E T
Sbjct: 246 GNLYSFGCPEYGQLGH-------NSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVL 298
Query: 416 PIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLN 475
P+P++ +ACG + +DS+ ++ WG G +LG+ ++ D + P ++
Sbjct: 299 PVPNV---VARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 355
Query: 476 NYTVLQVASGGQHSVILAK 494
Q+ G Q S L++
Sbjct: 356 GRGATQIYCGYQCSFALSE 374
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 150/330 (45%), Gaps = 43/330 (13%)
Query: 73 EVVVGGMHTVCLTEDGKVYTW-----GCNDEGALGREAEGDSEFIPQTVNLPKKAV-QIS 126
+V G H +T + ++YTW G G LG + L KA+ Q+S
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 432
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSGIVKIASGAD 182
GD +V + ++G +YA+GS D +G MG+ E ++ L + + +++ G +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGS--DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDN 490
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV 242
H V+LT + + GC E G+LG ++ R +VP K I V G
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV--------DVP-KALIIVAVQCGC 541
Query: 243 YNTF-ISSKGSILAFGLNNYSQLG-----------EADSEVQKSGNTCFFTPHLIKSLSD 290
TF ++ G +LA GLN +++LG EA EV T FT L K LS
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPY---TTSFT--LAKQLSF 596
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
K +A G+ H+ A++ G++ FG + G+LG+ N + + L K + ++
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVS 656
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
CG+ + A + ++ WG G GNG+
Sbjct: 657 CGDEFTIAATDDNHIFAWGNG-----GNGR 681
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 141/356 (39%), Gaps = 53/356 (14%)
Query: 48 GQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA 105
GQLG G R+ VE L + +V G TVC+T++G++Y +G + G +G +
Sbjct: 404 GQLGHGDKASYRQP-KHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 106 EGDSEFI-PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
E + P +N L Q+S GD+H V L + VY+WG +G +GL E
Sbjct: 463 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGC--GEYGRLGLDSEEDY 520
Query: 163 KTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR------ITQRSASR 214
TP +++ IV + G D +LT G +L G E +LG I A
Sbjct: 521 YTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
SF ++ + I + G + I +G +L FG N QLG + + +
Sbjct: 581 EVPYTTSFTLAKQLSFYK--IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL 638
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-- 331
N L L K+ ++ G ++A + I+A+G GRL + P
Sbjct: 639 GINL------LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHG 692
Query: 332 ----VTEPTPI----------------------PSLQDKTITSIACGNCVSFAIDS 361
+ P PI L KTI S + G + + S
Sbjct: 693 SDICTSWPRPIFGSLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQS 748
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 32 CKTGGGVVLTCGQGDTGQLGL----GPDVMERKTFALVEDLDNVVE-VVVGGMHTVCLTE 86
C T G + G G +G+ GP+V+E L N VE V G H V LT
Sbjct: 440 CVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFF--LSNPVEQVSCGDNHVVVLTR 497
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAW 144
+ +VY+WGC + G LG ++E D + PQ V++PK V + G + L + G V A
Sbjct: 498 NKEVYSWGCGEYGRLGLDSEEDY-YTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 145 GSFRDSHGSMGLKG--------EGIQKTPL-------KLESVSGIVKIASGADHFVMLTS 189
G + +GL E + P K S I IA G H +
Sbjct: 557 G--LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
RG LLT GC + GQLG + R G++ L PL K + V G T ++
Sbjct: 615 RGRLLTFGCNKCGQLG-----VGNYKKRLGINLLGG---PLGGKQVIRVSCGDEFTIAAT 666
Query: 250 KGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
+ I A+G +L +E + C P I
Sbjct: 667 DDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI 703
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 47/273 (17%)
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + QLG D + P ++ L K ++ G ++ + EG++YAFG
Sbjct: 399 GTKLHGQLGHGD-------KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFG 451
Query: 317 RHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
YG +G+ VS P V EP + + ++CG+ + +Y WG G +
Sbjct: 452 SDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR 511
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG E+D +L GK+ A G +++ +LGL
Sbjct: 512 LGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMS 571
Query: 410 PV------------TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ T T L I +IA G + AID G L +G QLG
Sbjct: 572 GIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV 631
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G L + + G L V++V+ G + ++
Sbjct: 632 GNYKKRLG-INLLGGPLGGKQVIRVSCGDEFTI 663
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 45/331 (13%)
Query: 73 EVVVGGMHTVCLTEDGKVYTW-----GCNDEGALGREAEGDSEFIPQTVNLPKKAV-QIS 126
+V G H +T + ++YTW G G LG + L KA+ Q+S
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 432
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKG----EGIQKTPLKLESVSGIVKIASGAD 182
GD +V + ++G +YA+GS D +G MG+ E ++ L + + +++ G +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGS--DYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDN 490
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHID-DVFTG 241
H V+LT + + GC E G+LG ++ + P +V + + I V G
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGLDSEE----------DYYTPQKVDVPKALIIVAVQCG 540
Query: 242 VYNTF-ISSKGSILAFGLNNYSQLG-----------EADSEVQKSGNTCFFTPHLIKSLS 289
TF ++ G +LA GLN +++LG EA EV T FT L K LS
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPY---TTSFT--LAKQLS 595
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K +A G+ H+ A++ G++ FG + G+LG+ N + + L K + +
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+CG+ + A + ++ WG G GNG+
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNG-----GNGR 681
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 131/311 (42%), Gaps = 31/311 (9%)
Query: 48 GQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA 105
GQLG G R+ VE L + +V G TVC+T++G++Y +G + G +G +
Sbjct: 404 GQLGHGDKASYRQP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 106 EGDSEFI-PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
E + P +N L Q+S GD+H V L + VY+WG +G +GL E
Sbjct: 463 VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGC--GEYGRLGLDSEEDY 520
Query: 163 KTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR------ITQRSASR 214
TP K++ IV + G D +LT G +L G E +LG I A
Sbjct: 521 YTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 215 NARRGMSFLEPGEVPLKRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQK 273
SF ++ + I + G + I +G +L FG N QLG + + +
Sbjct: 581 EVPYTTSFTLAKQLSFYK--IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL 638
Query: 274 SGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEP-- 331
N L L K+ ++ G ++A + I+A+G GRL + P
Sbjct: 639 GINL------LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHG 692
Query: 332 ----VTEPTPI 338
+ P PI
Sbjct: 693 SDICTSWPRPI 703
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 32 CKTGGGVVLTCGQGDTGQLGL----GPDVMERKTFALVEDLDNVVE-VVVGGMHTVCLTE 86
C T G + G G +G+ GP+V+E L N VE V G H V LT
Sbjct: 440 CVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF--LSNPVEQVSCGDNHVVVLTR 497
Query: 87 DGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYAW 144
+ +VY+WGC + G LG ++E D + PQ V++PK V + G + L + G V A
Sbjct: 498 NKEVYSWGCGEYGRLGLDSEEDY-YTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 145 GSFRDSHGSMGLKG--------EGIQKTPL-------KLESVSGIVKIASGADHFVMLTS 189
G + +GL E + P K S I IA G H +
Sbjct: 557 G--LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
RG LLT GC + GQLG + R G++ L PL K + V G T ++
Sbjct: 615 RGRLLTFGCNKCGQLG-----VGNYKKRLGINLLGG---PLGGKQVIRVSCGDEFTIAAT 666
Query: 250 KGS-ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLI 285
+ I A+G +L +E + C P I
Sbjct: 667 DDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI 703
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 105/273 (38%), Gaps = 47/273 (17%)
Query: 257 GLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFG 316
G + QLG D + P ++ L K ++ G ++ + EG++YAFG
Sbjct: 399 GTKLHGQLGHGD-------KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 451
Query: 317 RHDYGRLGLKNVSEP-VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQ 375
YG +G+ V+ P V EP + + ++CG+ + +Y WG G +
Sbjct: 452 SDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR 511
Query: 376 LGNGKEDD--------------------------ILNSEGKIYAFGRHDYGRLGLKNVSE 409
LG E+D +L GK+ A G +++ +LGL
Sbjct: 512 LGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMS 571
Query: 410 PV------------TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
+ T T L I +IA G + AID G L +G QLG
Sbjct: 572 GIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV 631
Query: 458 GKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G L + + G L V++V+ G + ++
Sbjct: 632 GNYKKRLG-INLLGGPLGGKQVIRVSCGDEFTI 663
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 40/311 (12%)
Query: 80 HTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPKKAVQISA--GDSHSVAL 135
H++ +T +GK+++WG ND+G LG GD + I P+ + K V + A G +H++AL
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLG---HGDIKRIDVPKLIESLKGEVFVHAACGRNHTLAL 208
Query: 136 LEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLT 195
E+G+VYA+G + +G K + + L + I K+A GA+ +++ +GNL +
Sbjct: 209 TENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYS 268
Query: 196 AGCPEQGQLGRIT--------QR---SASRNARRGMSFLEPGE----VPLKRKHIDDVFT 240
GCPE GQLG + QR ARR F+E + +P+ + D+
Sbjct: 269 FGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIAC 328
Query: 241 GVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK--SLSDKKFTMLA 297
G+ ++ I S+ + ++G Y +LG ++ + P L+K + +
Sbjct: 329 GINHSLILDSQKRVFSWGFGGYGRLGHSEQRDE-------MVPRLVKLFDFPGRGAAQIY 381
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACG-NCVS 356
+G S A++ G ++ +G + R + P + L + S+ACG + +
Sbjct: 382 AGATCSFAVSEMGGLFFWGATNTSR-------DSTMYPKAVQDLCGWKVRSLACGKSSII 434
Query: 357 FAIDSEGVLYG 367
A D + +G
Sbjct: 435 VAADESTISWG 445
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 147/363 (40%), Gaps = 77/363 (21%)
Query: 189 SRGNLLTAGCPEQGQLGRI---TQRSASRNARRGMSFLEPGEV-PLKRKHIDDVFTG--- 241
++G LL G +GR Q++A RN G + P L + V +G
Sbjct: 93 AKGQLLIFGATNWDLIGRKEVPKQQAAYRNL--GQNLWGPHRYGCLTGVQVRSVASGSCA 150
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQH 301
++ I+ +G + ++G N+ QLG D + P LI+SL + F A G++
Sbjct: 151 AHSLLITVEGKLWSWGRNDKGQLGHGDIKR-------IDVPKLIESLKGEVFVHAACGRN 203
Query: 302 HSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDS 361
H+LAL G +YAFG + G+LGL N ++ V P I + IT +ACG S +D
Sbjct: 204 HTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFSMIMDC 262
Query: 362 EGVLYGWGMGNGYQLGNGKEDD-------------------------------------- 383
+G LY +G QLG+ +
Sbjct: 263 KGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVV 322
Query: 384 ------------ILNSEGKIYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQDKTITSIAC 430
IL+S+ +++++G YGRLG + E V + + I
Sbjct: 323 VRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYA 382
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G SFA+ G L+ WG N + D + P ++ L + V +A G+ S+
Sbjct: 383 GATCSFAVSEMGGLFFWGATNTSR------DSTMYPKAVQ--DLCGWKVRSLAC-GKSSI 433
Query: 491 ILA 493
I+A
Sbjct: 434 IVA 436
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 62/304 (20%)
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSG----NTCFFTPHLIKSLSDKKFTMLASGQ--HH 302
+KG +L FG N+ +G + Q++ + PH L+ + +ASG H
Sbjct: 93 AKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLTGVQVRSVASGSCAAH 152
Query: 303 SLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE 362
SL + EGK++++GR+D G+LG ++ + P I SL+ + ACG + A+
Sbjct: 153 SLLITVEGKLWSWGRNDKGQLGHGDIKR-IDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 363 GVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGR 396
G +Y +G QLG G + D I++ +G +Y+FG
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGC 271
Query: 397 HDYGRLGLKNVSEPVTEPT--------------------------PIPSLQDKTITSIAC 430
+YG+LG + + + P+P++ + IAC
Sbjct: 272 PEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNV---VVRDIAC 328
Query: 431 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
G S +DS+ ++ WG G +LG+ ++ D + P ++ Q+ +G S
Sbjct: 329 GINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSF 388
Query: 491 ILAK 494
+++
Sbjct: 389 AVSE 392
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFA-LVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
T G V G+ GQLGLG + A ++ + + +V G ++ + G +Y+
Sbjct: 209 TENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYS 268
Query: 93 WGCNDEGALGREAEG-----------DSEFIP-------------QTVNLPKKAVQ-ISA 127
+GC + G LG ++G D E I Q + +P V+ I+
Sbjct: 269 FGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIAC 328
Query: 128 GDSHSVALLEDGTVYAWG 145
G +HS+ L V++WG
Sbjct: 329 GINHSLILDSQKRVFSWG 346
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 150/322 (46%), Gaps = 43/322 (13%)
Query: 72 VEVVVGG---MHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLPKKAVQIS 126
V VV G H++ +T +GK+++WG N++G LG GD++ + P+ + V +S
Sbjct: 150 VRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG---HGDTKRVEAPRLIEGLSHEVIVS 206
Query: 127 A--GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHF 184
A G +H++AL E G+V+A+G + +G + + + + + I K+A GA+
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFS 266
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNA-----------RRGMSFLEPGE----VP 229
+++ +GNL + GCPE GQLG + A RR F+E + +P
Sbjct: 267 MIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP 326
Query: 230 LKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIK-- 286
+ + DV G +T + S+ + ++G Y +LG A+ + + P L+K
Sbjct: 327 VPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE-------MVPRLVKLF 379
Query: 287 SLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTI 346
+ + + +G S A++ G ++ +G + R E P + L I
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSR-------ESTMYPKAVQDLCGWRI 432
Query: 347 TSIACG-NCVSFAIDSEGVLYG 367
S+ACG + + A D + +G
Sbjct: 433 RSLACGKSSIIVAADESTISWG 454
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 151/387 (39%), Gaps = 67/387 (17%)
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVML 187
+HS+ + +G +++WG R+ G +G + P +E +S IV A G +H + L
Sbjct: 160 AHSLLITTEGKLWSWG--RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLAL 217
Query: 188 TSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGV-YNTF 246
T G++ G + GQLG Q A P ++ + I + G ++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDA---------VPSPAQIMYNGQPITKMACGAEFSMI 268
Query: 247 ISSKGSILAFGLNNYSQLGEAD-----SEVQKSGNTCFFTPHLIKSLSDKK--------- 292
+ KG++ +FG Y QLG + Q+ C P + +K
Sbjct: 269 MDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVP 328
Query: 293 ---FTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-LKNVSEPVTEPTPIPSLQDKTITS 348
+A G +H+L L+S+ +++++G YGRLG + E V + + +
Sbjct: 329 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQ 388
Query: 349 IACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVS 408
I G SFA+ G L+ WG N + E +Y
Sbjct: 389 IYAGYTCSFAVSEVGGLFFWGATN------------TSRESTMY---------------- 420
Query: 409 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGY-QLGNGKEDDILEPM 467
P + L I S+ACG S + ++ WG + +LG G
Sbjct: 421 -----PKAVQDLCGWRIRSLACGKS-SIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 474
Query: 468 KIEGKQLNNYTVLQVASGGQHSVILAK 494
E K L+ QVA G HS+++A+
Sbjct: 475 AQEVKTLDGIFSEQVAMGYSHSLVIAR 501
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 56/276 (20%)
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSG----NTCFFTPHLIKSLSDKKFTMLASGQ--HHS 303
KG +L FG N+ +G + Q++ + PH L+ + + SG HS
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 304 LALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 363
L + +EGK++++GR++ G+LG + V P I L + I S ACG + A+ G
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKR-VEAPRLIEGLSHEVIVSAACGRNHTLALTETG 221
Query: 364 VLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAFGRH 397
++ +G QLG G + D I++ +G +Y+FG
Sbjct: 222 SVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCP 281
Query: 398 DYGRLGLKNVSEPVTE-----------PTPIPSLQDKT------------ITSIACGNCV 434
+YG+LG + + + P + +KT + +ACG
Sbjct: 282 EYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANH 341
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+ +DS+ ++ WG G +LG+ ++ D + P ++
Sbjct: 342 TLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK 377
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL----PKKAVQIS 126
V +V G HT+ L +V++WG G LG AE E +P+ V L + A QI
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLG-HAEQKDEMVPRLVKLFDFPGRGASQIY 390
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHF 184
AG + S A+ E G ++ WG+ S S P ++ + G I +A G
Sbjct: 391 AGYTCSFAVSEVGGLFFWGATNTSREST--------MYPKAVQDLCGWRIRSLACGKSSI 442
Query: 185 VMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
++ + P G+LG + S A + + L+
Sbjct: 443 IVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 482
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 388 EGKIYAFGRHDYGRLGLK----------NVSEPVTEPTPIPSLQDKTITSIACGNCV--S 435
+G++ FG ++ +G K N+ + + P L + ++ G+C S
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 436 FAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
I +EG L+ WG QLG+G + P IEG L++ ++ A G H++ L +
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEG--LSHEVIVSAACGRNHTLALTE 219
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 176/431 (40%), Gaps = 70/431 (16%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA---VQISAGDSHSVALLEDGTVYAWGS 146
++ WG N G LG + D F+PQ ++ +A ++ G HS + + G ++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDV-FLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 147 FRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGR 206
+D +G E ++ T K I ++A G D +MLT +G +L+ G GQLG
Sbjct: 76 NKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLG- 134
Query: 207 ITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLG 265
R+ + P + R+ + V G+ + ++ GS+ +G + L
Sbjct: 135 -----VPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWG----TGLA 182
Query: 266 EADSEVQKSGNTCFF----TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYG 321
+ + N F P + L + +G HS +L G++Y +GR+ +G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 322 RLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE 381
+L + V P+ + QD+ +T+ V GW
Sbjct: 243 QLASRAVFLPLPQRIEAHYFQDEKVTA---------------VWSGW------------T 275
Query: 382 DDILNSE-GKIYAFGRHDYGRLGLK----NVSEPVTE-------------PTPIPSLQDK 423
+ +E GK++ +GR DYG+LG + +PV + P+P+ L
Sbjct: 276 HLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGA 335
Query: 424 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
T I+CG+ + A+ + WG G+G E ++ P ++ + +L V
Sbjct: 336 --TEISCGSEHNLAVIRDKCC-SWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVG 392
Query: 484 SGGQHSVILAK 494
G HS+ + +
Sbjct: 393 CGAGHSLAVCQ 403
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 178/428 (41%), Gaps = 61/428 (14%)
Query: 34 TGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVY 91
+ V+ G GQLGLG DV + + + V GG H+ +T+ G ++
Sbjct: 12 SAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLF 71
Query: 92 TWGCNDEGALGREAEGDSEFIPQ-TVNLPKKAV---QISAGDSHSVALLEDGTVYAWGSF 147
G N +G LG G +E + + T+ P + Q++ G ++ L E G V + GS
Sbjct: 72 VCGLNKDGQLGL---GHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGS- 127
Query: 148 RDSHGSMGLKGEGIQK--TPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAG------- 197
++ G +G+ G +K P +E + +V +A+G H + T+ G++ G
Sbjct: 128 -NAFGQLGVP-HGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSG 185
Query: 198 ---CPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSIL 254
CP Q +T + SR ++ LE + V ++ ++ G +
Sbjct: 186 RRLCPGQNLPLFLTAKEPSR-----VTGLE------NSTAVCAVAGSDHSASLTDTGELY 234
Query: 255 AFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKS--LSDKKFTMLASGQHHSLALNSEGKI 312
+G N + QL S P I++ D+K T + SG H +A GK+
Sbjct: 235 VWGRNKHGQLA--------SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKV 286
Query: 313 YAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 372
+ +GR DYG+LG + EP P+ QD ++ N V + +
Sbjct: 287 FTWGRADYGQLGRR--LEPPEAQKPVE--QDSSLAFQGPQNSVPSPLHC--------LTG 334
Query: 373 GYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL--QDKTITSIAC 430
++ G E ++ K ++G +++G G S V PTP+ +L + + C
Sbjct: 335 ATEISCGSEHNLAVIRDKCCSWGWNEHGMCGDGTESN-VWTPTPVQALPPSPSRLLLVGC 393
Query: 431 GNCVSFAI 438
G S A+
Sbjct: 394 GAGHSLAV 401
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 100/253 (39%), Gaps = 43/253 (16%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
+S+ + A+G N+Y QLG E F L + G HS +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKE------DVFLPQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
G ++ G + G+LGL + E V T L+ I +ACG F I
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACG--WDFTI------- 114
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTIT 426
+L +G++ + G + +G+LG+ + P I L++K +
Sbjct: 115 -----------------MLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREK-VV 156
Query: 427 SIACGNCVSFAIDSEGVLYGWGMG---NGYQLGNGKEDDIL----EPMKIEGKQLNNYTV 479
+A G + A + G ++ WG G +G +L G+ + EP ++ G L N T
Sbjct: 157 CVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTG--LENSTA 214
Query: 480 LQVASGGQHSVIL 492
+ +G HS L
Sbjct: 215 VCAVAGSDHSASL 227
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 432 NCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNY----TVLQVASGGQ 487
+C S + + VL+ WG + QLG G ++D+ P +QL+++ + V GG
Sbjct: 5 SCASETVSAAAVLFAWGANSYGQLGLGHKEDVFLP-----QQLSDFCQAGCIKSVTGGGG 59
Query: 488 HSVIL 492
HS ++
Sbjct: 60 HSAVV 64
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 23/141 (16%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLG--LGP-----DVMERKTFAL------ 64
+KV L KT G V T G+ D GQLG L P V + + A
Sbjct: 265 EKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNS 324
Query: 65 ----VEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNL-- 118
+ L E+ G H + + D K +WG N+ G G E + + P V
Sbjct: 325 VPSPLHCLTGATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNV-WTPTPVQALP 382
Query: 119 --PKKAVQISAGDSHSVALLE 137
P + + + G HS+A+ +
Sbjct: 383 PSPSRLLLVGCGAGHSLAVCQ 403
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 161/355 (45%), Gaps = 66/355 (18%)
Query: 156 LKGEGIQKTP--LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSAS 213
L G G +TP +KL I + GA+H ++L+S G
Sbjct: 79 LAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF----------------EYD 122
Query: 214 RNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKG-SILAFGLNNYSQLGEADSEVQ 272
+ + + F E L+ K I + G Y++ SKG + A+G N + QLG +
Sbjct: 123 NYSMKHLRF----ESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG----R 174
Query: 273 KSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV 332
K +T TP +++ L+ +++G+ HS+AL+ G IY++G+++ G+LGL + +E
Sbjct: 175 KFPSTT--TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGH-TESK 231
Query: 333 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIY 392
+P+ I L ++ + +ACG S + +G+L+ +G G QLG+
Sbjct: 232 DDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGH-------------- 277
Query: 393 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSE-GVLYGWGMGN 451
N ++ P + L +T IACG + A S+ G ++ +G G
Sbjct: 278 -------------NSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 452 GYQLGNGKEDDILEPMKI-----EGKQLNNYTV---LQVASGGQHSVILAKPKPN 498
QLGNG D L P+ + E +L ++T L + +GG S++L K N
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKEN 379
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 33/253 (13%)
Query: 77 GGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALL 136
G H + L+ DGK + + L E ++ KK +QI+ GD HS+AL
Sbjct: 105 GAEHMLILSSDGKPFEYDNYSMKHLRFE----------SILQEKKIIQITCGDYHSLALS 154
Query: 137 EDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNL 193
+ G ++AWG ++ HG +G+ + TP +E ++G+ +I++G H + L+ GN+
Sbjct: 155 KGGELFAWG--QNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFISSKGS 252
+ G E GQLG ++ S +E L + ++ V G ++ ++ G
Sbjct: 213 YSWGKNECGQLGL-----GHTESKDDPSLIE----GLDNQKVEFVACGGSHSALLTQDGL 263
Query: 253 ILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE-GK 311
+ FG + QLG ++ + P L+ L + T +A G+ H+LA S+ GK
Sbjct: 264 LFTFGAGKHGQLGHNSTQNE-------LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGK 316
Query: 312 IYAFGRHDYGRLG 324
+++FG G+LG
Sbjct: 317 VFSFGSGKDGQLG 329
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 57 MERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTV 116
M+ F + ++++ G H++ L++ G+++ WG N G LG + S PQ V
Sbjct: 126 MKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIV 185
Query: 117 N----LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVS 172
+P QISAG++HS+AL G +Y+WG ++ G +GL + P +E +
Sbjct: 186 EHLAGVP--LAQISAGEAHSMALSMSGNIYSWG--KNECGQLGLGHTESKDDPSLIEGLD 241
Query: 173 G--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPL 230
+ +A G H +LT G L T G + GQLG ++++N R E L
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLG----HNSTQNELRPCLVAE-----L 292
Query: 231 KRKHIDDVFTGVYNT--FISSKGSILAFGLNNYSQLG 265
+ + G ++T ++S G + +FG QLG
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNV--VEVVVGGMHTVCLTEDGKVY 91
+ GG + GQ GQLG+G T +VE L V ++ G H++ L+ G +Y
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 213
Query: 92 TWGCNDEGALG---REAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
+WG N+ G LG E++ D I N +K ++ G SHS L +DG ++ +G+
Sbjct: 214 SWGKNECGQLGLGHTESKDDPSLIEGLDN--QKVEFVACGGSHSALLTQDGLLFTFGA-- 269
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADH-FVMLTSRGNLLTAGCPEQGQLG 205
HG +G + P + + G + +IA G H ++ G + + G + GQLG
Sbjct: 270 GKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 36 GGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDN--VVEVVVGGMHTVCLTEDGKVYTW 93
G + + G+ + GQLGLG + +L+E LDN V V GG H+ LT+DG ++T+
Sbjct: 209 SGNIYSWGKNECGQLGLG-HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 94 GCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISAGDSHSVALLED-GTVYAWGSFRDS 150
G G LG + +E P V + + QI+ G H++A + D G V+++GS +D
Sbjct: 268 GAGKHGQLGHNS-TQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKD- 325
Query: 151 HGSMGLKGEGIQKTPLKLE-SVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQ 209
G +G G Q PL ++ S S +K+ S TS L+ Q L I +
Sbjct: 326 -GQLGNGGTRDQLMPLPVKVSSSEELKLESH-------TSEKELIMIAGGNQSILLWIKK 377
Query: 210 RSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT 245
++ N +R + L G V ++ I DV T + +
Sbjct: 378 ENSYVNLKRTIPTLNEGTV---KRWIADVETKRWQS 410
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 170/430 (39%), Gaps = 86/430 (20%)
Query: 112 IPQTVNLPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL--------KGEGI-- 161
I NLP + ++ G++ + ED + WG+F ++ M + + + +
Sbjct: 693 ISNHANLPN-FLPLAGGNNCGATITEDDRLMIWGNFTNAQQRMEMPQMNAKSKRSDSVTN 751
Query: 162 -------------QKTPLKLESVSGIVK-IASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
Q P LE G + IA GA+H ++L+S G L G GQ G
Sbjct: 752 GAPTLPPPAPKPEQHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCG-- 809
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGE 266
+ R G+ P I+ + G +++ FI S GS+ FG + QLG
Sbjct: 810 ----VGHSFRIANLHQVDGDWPA----IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGH 861
Query: 267 ADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLK 326
N+ P + L K T +A G+ H++ L G++ G YG++G+
Sbjct: 862 GGR-----NNSNQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVD 915
Query: 327 NVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILN 386
+ + V TP+P L + IA S I + ++ WG
Sbjct: 916 DDIKKVFAFTPLP-LGPLRVRDIATHYYHSICITEDNRVFEWGRNP-------------- 960
Query: 387 SEGKIYAFGRHDYGRLGLKNVSEPVTEPTP----------------IPS----------L 420
E K+ F LKN +P + P+P IP
Sbjct: 961 QELKMRMFVMKKIRSAQLKNTEDP-SSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHF 1019
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
D I S+ACG S I SEG LY WG G YQLG+G +++ +EP ++ + N +
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQV--FEPNGAKWV 1077
Query: 481 QVASGGQHSV 490
V+ G H++
Sbjct: 1078 NVSLGNNHTI 1087
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 143/365 (39%), Gaps = 91/365 (24%)
Query: 110 EFIPQTVNLPK-KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL 168
+ +P+ + P + I+ G H + L G + AWG R G G G L
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNR-----FGQCGVGHSFRIANL 819
Query: 169 ESVSG----IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE 224
V G I KIA G H + S G+L T G GQLG R + L
Sbjct: 820 HQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGH--------GGRNNSNQLV 871
Query: 225 PGEVPLKRKHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPH 283
P V + + G +T + + G +L G +Y Q+G D +++K FTP
Sbjct: 872 PTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG-VDDDIKK---VFAFTPL 927
Query: 284 LIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRH------------DYGRLGLKNVSEP 331
+ L + +A+ +HS+ + + +++ +GR+ LKN +P
Sbjct: 928 PLGPLRVRD---IATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDP 984
Query: 332 VTEPTP----------------IPS----------LQDKTITSIACGNCVSFAIDSEGVL 365
+ P+P IP D I S+ACG S I SEG L
Sbjct: 985 -SSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTL 1043
Query: 366 YGWGMGNGYQLGNGKEDDIL--------------------------NSEGKIYAFGRHDY 399
Y WG G YQLG+G +++ + +G ++A+G++D+
Sbjct: 1044 YTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDF 1103
Query: 400 GRLGL 404
G+ G+
Sbjct: 1104 GQCGV 1108
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 163/391 (41%), Gaps = 52/391 (13%)
Query: 48 GQLGLGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEG 107
GQ G+G + D + ++ G H+ + DG ++T+G G LG
Sbjct: 806 GQCGVGHSFRIANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRN 865
Query: 108 DS-EFIPQTVN-LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQK-- 163
+S + +P VN L K QI+ G +H+V L + G V GS S+G MG+ + I+K
Sbjct: 866 NSNQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGS--GSYGQMGV-DDDIKKVF 922
Query: 164 --TPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMS 221
TPL L + + IA+ H + +T + G Q R+ R+A+
Sbjct: 923 AFTPLPLGPLR-VRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQ---- 977
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
L+ E P + S+ GS LN +++ D +++
Sbjct: 978 -LKNTEDP-------------SSPSPSTNGSTPRVNLNLPAEIPREDLGLRE-------- 1015
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 341
+K D +A G HS + SEG +Y +G+ +LG N +E + EP +
Sbjct: 1016 ---VKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERM-EPHQVFEP 1071
Query: 342 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG-----NGKEDDILNSEGKIYAFGR 396
+++ GN + A +G ++ WG + Q G NG D+ K + F
Sbjct: 1072 NGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADV----TKKFFFQA 1127
Query: 397 HDYGRLGLKNVSEP--VTEPTPIPSLQDKTI 425
D GR + NV E V +P IP ++ + +
Sbjct: 1128 RD-GRRFMPNVDESQFVQKPGLIPDVRVRNL 1157
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 40/204 (19%)
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD-----KTITSIA 350
+A G H L L+S G++ A+G + +G+ G V I +L I IA
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCG-------VGHSFRIANLHQVDGDWPAIEKIA 833
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
CG S I S+G L+ +G G QLG+G GR++ +L
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHG---------------GRNNSNQL-------- 870
Query: 411 VTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
PT + L K +T IACG + + G + G G+ Q+ G +DDI +
Sbjct: 871 --VPTRVNGLICK-VTQIACGRAHTVVLTDTGRVLVCGSGSYGQM--GVDDDIKKVFAFT 925
Query: 471 GKQLNNYTVLQVASGGQHSVILAK 494
L V +A+ HS+ + +
Sbjct: 926 PLPLGPLRVRDIATHYYHSICITE 949
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 37 GVVLTCGQGDTGQLGLGP----DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
G V G G GQLG+G M K AL +++V G H++ L+EDG V++
Sbjct: 93 GKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI--KIIQVSCGHYHSLALSEDGHVFS 150
Query: 93 WGCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLEDGTVYAWGSFR 148
WG N EG LG S+ IPQ V +P Q++AG +HS AL GT + WGS R
Sbjct: 151 WGRNSEGQLGLGKNSRSQAIPQKVKSLEGIP--LAQVAAGGTHSFALSLTGTSFGWGSNR 208
Query: 149 DSHGSMGLKGEGIQKTPLKLESVSG-----IVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G + L G +++ K S+ ++ I+ G +H +LT G + T G GQ
Sbjct: 209 S--GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
Query: 204 LGRITQRSASRNARRGMSFLE 224
L + + R+ +RG +E
Sbjct: 267 L-----QPSPRSGQRGPQLIE 282
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 163 KTPLKLES-VSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRG 219
+ P +L++ SGI ++ ASG H ++L S + + G GQLG+ +S R
Sbjct: 10 RKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERP---- 65
Query: 220 MSFLEPGEVPLKRKHIDDVFTGV-YNTFISSKGSILAFGLNNYSQLGEAD-SEVQKSGNT 277
EP + L H+D V G ++ + KG + A+G + QLG + E+
Sbjct: 66 ----EPIQA-LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS----- 115
Query: 278 CFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 337
F P IK+L+ K ++ G +HSLAL+ +G ++++GR+ G+LGL S P
Sbjct: 116 --FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 173
Query: 338 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRH 397
+ SL+ + +A G SFA+ G +GWG QL
Sbjct: 174 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA-------------------- 213
Query: 398 DYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN 457
L V E + +P I +L++ ++ I+CG + + EG ++ +G + QL
Sbjct: 214 ----LSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQP 269
Query: 458 GKEDDILEPMKIEG 471
P IEG
Sbjct: 270 SPRSGQRGPQLIEG 283
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)
Query: 39 VLTCGQGDTGQLGLGPD-VMER-KTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCN 96
V +CG GQLG D ER + + DL +V V G H+V + GKV+ WG
Sbjct: 43 VYSCGDNSWGQLGQRRDQSTERPEPIQALNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAG 101
Query: 97 DEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSM 154
EG LG + F+P + K +Q+S G HS+AL EDG V++WG R+S G +
Sbjct: 102 SEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG--RNSEGQL 159
Query: 155 GL-KGEGIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
GL K Q P K++S+ GI ++A+G H L+ G G GQL +
Sbjct: 160 GLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------A 213
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT-FISSKGSILAFGLNNYSQLGEADSE 270
S N + + LK + + G +T ++ +G + FG N+ QL +
Sbjct: 214 LSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRS 273
Query: 271 VQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA-LNSEGKIYAFGRHDYGRLGLKNVS 329
Q+ P LI+ + + + + +H++A + + G++ + GR G + S
Sbjct: 274 GQRG-------PQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGR------GPSHTS 319
Query: 330 EPVTEPTP 337
P + P
Sbjct: 320 NPTHQEAP 327
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
ASG+HHSL L S ++Y+ G + +G+LG + + P PI +L D + ++CG S
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRR-DQSTERPEPIQALNDLHVDLVSCGKEHS 86
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
A+ +G ++ WG G+ G+LG+ E PT
Sbjct: 87 VAVCHKGKVFAWGAGSE--------------------------GQLGIGEFKEISFMPTK 120
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILE-PMKIEGKQLN 475
I +L I ++CG+ S A+ +G ++ WG + QLG GK P K+ K L
Sbjct: 121 IKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV--KSLE 178
Query: 476 NYTVLQVASGGQHSVILA 493
+ QVA+GG HS L+
Sbjct: 179 GIPLAQVAAGGTHSFALS 196
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 132/258 (51%), Gaps = 19/258 (7%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-ISAGD 129
+++ G H++ L + +VY+ G N G LG+ + +E L V +S G
Sbjct: 24 LLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGK 83
Query: 130 SHSVALLEDGTVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESVSG--IVKIASGADHFVM 186
HSVA+ G V+AWG+ S G +G+ + + I P K+++++G I++++ G H +
Sbjct: 84 EHSVAVCHKGKVFAWGA--GSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLA 141
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF 246
L+ G++ + G +GQLG + + S S+ + + LE +PL + V G ++F
Sbjct: 142 LSEDGHVFSWGRNSEGQLG-LGKNSRSQAIPQKVKSLEG--IPLAQ-----VAAGGTHSF 193
Query: 247 -ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
+S G+ +G N QL + ++V++ + PH I +L + ++ G H+
Sbjct: 194 ALSLTGTSFGWGSNRSGQLALSGNKVKEQ----IYKPHSIGALKNLSVIYISCGYEHTAV 249
Query: 306 LNSEGKIYAFGRHDYGRL 323
L EG+++ FG + G+L
Sbjct: 250 LTEEGQVFTFGGNSSGQL 267
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 32/298 (10%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAG 128
+ V G + T CLT+ G + T+G G LG D S+ L + VQ++ G
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 129 DSHSVALLEDGTVYAWGSF---------RDSHGSMGLKGEGIQKTPLKLESVSGIVKIAS 179
SH +AL DG ++AWG R+SH Q+ P+ + ++
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCP-------QQVPVAPGQEAQ--RVVC 508
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRI-----TQRSASRNARRGMSFLEPGEVPLKRKH 234
G D ++LTS G +L G +LG + + +SF G PL ++
Sbjct: 509 GIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEP 568
Query: 235 IDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKF 293
+ V G ++ I++ G FG N + QLG + V ++ P ++ L K
Sbjct: 569 LLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA-------PCRVQGLEGIKM 621
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
M+A G ++A+ +EG++Y++G+ GRLG ++ + P + +TS++C
Sbjct: 622 VMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSC 679
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 146/340 (42%), Gaps = 48/340 (14%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------ 123
VV+V G +T G++ W GA G +P V LP+
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGA------GGGTLLPGAVELPQPQFVSRFLE 392
Query: 124 --------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-- 173
++ GD + L + G + +GS S+G +G P +E++ G
Sbjct: 393 GQSGVTIKHVACGDLFTACLTDRGIIMTFGS--GSNGCLGHGNLTDISQPTIVEALLGYE 450
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR- 232
+V++A GA H + L++ G L G + G+LG T+ S + P +VP+
Sbjct: 451 MVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC----------PQQVPVAPG 500
Query: 233 KHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLG-------EADSEVQKSGNTCFFTPHL 284
+ V G+ ++ I +S G +LA G N +++LG E Q+ FTP
Sbjct: 501 QEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLG 560
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSEPVTEPTPIPSLQ 342
L + + G HS A+ + G Y FG + +G+LG + VS P + L+
Sbjct: 561 SAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSR---APCRVQGLE 617
Query: 343 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ +ACG+ + A+ +EG +Y WG G +LG ED
Sbjct: 618 GIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDED 657
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 159/392 (40%), Gaps = 80/392 (20%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGC 198
+VYAWG G +PL+L + + +V++A+G +T G L+
Sbjct: 319 SVYAWG--------------GGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEA 364
Query: 199 PEQGQLGRITQRSASRNARRGM--SFLEPGEVPLKRKHID--DVFTGVYNTFISSKGSIL 254
P G G A + FLE G+ + KH+ D+FT ++ +G I+
Sbjct: 365 PPLGAGGGTLLPGAVELPQPQFVSRFLE-GQSGVTIKHVACGDLFTAC----LTDRGIIM 419
Query: 255 AFGLNNYSQLGEADSEVQKSGN-TCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIY 313
FG + LG GN T P ++++L + +A G H LAL+++G+++
Sbjct: 420 TFGSGSNGCLGH--------GNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELF 471
Query: 314 AFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN- 372
A+GR D GRLG E P +P + + CG S + S G + G
Sbjct: 472 AWGRGDGGRLG-LGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRF 530
Query: 373 ---------------GYQ----------LGNGKEDD--------------ILNSEGKIYA 393
YQ LG+ D + + G Y
Sbjct: 531 NKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYT 590
Query: 394 FGRHDYGRLGL--KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGN 451
FG + +G+LG + VS P + L+ + +ACG+ + A+ +EG +Y WG G
Sbjct: 591 FGSNQHGQLGTSSRRVSR---APCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGT 647
Query: 452 GYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+LG ED L P ++ + + Y V V+
Sbjct: 648 RGRLGRRDEDAGL-PRPVQLDETHPYMVTSVS 678
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 98/250 (39%), Gaps = 42/250 (16%)
Query: 280 FTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIP 339
F ++ S +A G + L G I FG G LG N+++ +++PT +
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTD-ISQPTIVE 444
Query: 340 SLQDKTITSIACGNCVSFAIDSEGVLYGW----------------GMGNGYQLGNGKEDD 383
+L + +ACG A+ ++G L+ W + G+E
Sbjct: 445 ALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQ 504
Query: 384 ----------ILNSEGKIYAFGRHDYGRLGLKNVS---EPVTEP--------TPIPS--L 420
IL S G++ A G + + +LGL ++S EPV TP+ S L
Sbjct: 505 RVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPL 564
Query: 421 QDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVL 480
+ + + G S AI + G Y +G QLG P +++G L ++
Sbjct: 565 DQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG--LEGIKMV 622
Query: 481 QVASGGQHSV 490
VA G +V
Sbjct: 623 MVACGDAFTV 632
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 34/260 (13%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+++T G G G LG G ++ + +VE L +V+V G H + L+ DG+
Sbjct: 411 CLTDRGIIMTFGSGSNGCLGHG-NLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGE 469
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSF 147
++ WG D G LG +S PQ V + ++A ++ G S+ L G V A GS
Sbjct: 470 LFAWGRGDGGRLGLGTR-ESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSN 528
Query: 148 RDSHGSMGLKGEGIQKTPLKLESV----------------SGIVKIASGADHFVMLTSRG 191
R +GL + + P+ + V ++ + G H +T+ G
Sbjct: 529 R--FNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASG 586
Query: 192 NLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGE-VPLKRKHIDDVFTGVYNTFISSK 250
+ T G + GQLG ++SR R ++ E + + D FT + ++
Sbjct: 587 DCYTFGSNQHGQLG-----TSSRRVSRAPCRVQGLEGIKMVMVACGDAFT----VAVGAE 637
Query: 251 GSILAFGLNNYSQLGEADSE 270
G + ++G +LG D +
Sbjct: 638 GEVYSWGKGTRGRLGRRDED 657
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 140/299 (46%), Gaps = 42/299 (14%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRK 233
+++ ASG H ++L + +L+ G +GQLGR R A+RG EP + L+
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR-------RGAQRG-ELPEPIQA-LETL 75
Query: 234 HIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGEAD-SEVQKSGNTCFFTPHLIKSLSDK 291
+D V G ++ + KG + A+G + QLG + E+ FTP I +L+D
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-------FTPKKIMTLNDI 128
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
K ++ G +HSLAL+ + +++++G++ +G+LGL P + SL+ + +A
Sbjct: 129 KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 352 GNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPV 411
G SFA+ G +GWG NS G++ GR NV
Sbjct: 189 GGAHSFALSLCGTSFGWGS---------------NSAGQLALSGR---------NVPVQS 224
Query: 412 TEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
+P + +L++ + I+CG+ + + +G ++ +G QLG + P +E
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE 283
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 39 VLTCGQGDTGQLG--------LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKV 90
VL+CG GQLG L + +T L+ DL V G H++ + G+V
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGELPEPIQALET--LIVDL-----VSCGKEHSLAVCHKGRV 96
Query: 91 YTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWGSFR 148
+ WG EG LG + F P+ + K +Q+S G HS+AL +D V++WG +
Sbjct: 97 FAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWG--K 154
Query: 149 DSHGSMGLKGE-GIQKTPLKLESVSGI--VKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
+SHG +GL E Q +P ++ S+ GI ++A+G H L+ G G GQL
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 206 RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
++ R+ + + +S + + D T V ++ G + FG N QLG
Sbjct: 215 -LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAV----LTQDGKVFTFGDNRSGQLG 269
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA-LNSEGKIYAFG 316
+ + +K G P L++ + D + + G +H+LA +++ G++ +FG
Sbjct: 270 YSPTP-EKRG------PQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 37 GVVLTCGQGDTGQLGLGP---DVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTW 93
G V G G GQLG+G K + D+ +++V G H++ L++D +V++W
Sbjct: 94 GRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHSLALSKDSQVFSW 152
Query: 94 GCNDEGALGREAEGDSEFIPQTVN----LPKKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
G N G LG E S+ PQ V +P Q++AG +HS AL GT + WGS +
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIP--LAQVAAGGAHSFALSLCGTSFGWGS--N 208
Query: 150 SHGSMGLKGEGI---QKTPLKLESVS--GIVKIASGADHFVMLTSRGNLLTAGCPEQGQL 204
S G + L G + PL + ++ G+V I+ G H +LT G + T G GQL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 205 GRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNT--FISSKGSILAFG 257
G + +RG P V + + G Y+T ++ + G +++FG
Sbjct: 269 G-----YSPTPEKRG-----PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 30/198 (15%)
Query: 297 ASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVS 356
ASG+ HSL L + ++ + G + G+LG + P PI +L+ + ++CG S
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVSCGKEHS 87
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTP 416
A+ +G ++ WG G+ G+LG+ E P
Sbjct: 88 LAVCHKGRVFAWGAGSE--------------------------GQLGIGEFKEISFTPKK 121
Query: 417 IPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKE-DDILEPMKIEGKQLN 475
I +L D I ++CG+ S A+ + ++ WG + QLG GKE P ++ + L
Sbjct: 122 IMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV--RSLE 179
Query: 476 NYTVLQVASGGQHSVILA 493
+ QVA+GG HS L+
Sbjct: 180 GIPLAQVAAGGAHSFALS 197
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGV 443
+L + ++ + G + G+LG + P PI +L+ + ++CG S A+ +G
Sbjct: 37 LLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVSCGKEHSLAVCHKGR 95
Query: 444 LYGWGMGNGYQLGNGKEDDI-LEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
++ WG G+ QLG G+ +I P KI LN+ ++QV+ G HS+ L+K
Sbjct: 96 VFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHYHSLALSK 145
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 137/319 (42%), Gaps = 47/319 (14%)
Query: 48 GQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA 105
GQLG G R+ VE L +V +V G TVC+T++G++Y++G + G LG
Sbjct: 386 GQLGHGDRASYRQP-KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQ 444
Query: 106 EGDSEFI-PQTVN--LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQ 162
SE + P V+ L + Q+S GDSH +AL +VY+WG +G +GL E
Sbjct: 445 SAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGC--GEYGRLGLDSEDDV 502
Query: 163 KTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA-------- 212
+P K+E G IV + G+D +LT G +L G E +LG + Q +A
Sbjct: 503 YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLG-LNQYTAGIINHEAF 561
Query: 213 -------SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLG 265
S + +SF + + R H I +G +L FG N QLG
Sbjct: 562 QEVPYTTSLTLAKQLSFYKIRSISPGRTH---------TAAIDERGRLLTFGSNKCGQLG 612
Query: 266 EADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL 325
D N L L K+ ++ G + A ++ I+A+G GRL +
Sbjct: 613 VGDYRKHLGINL------LGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Query: 326 KNVSEP------VTEPTPI 338
P + P PI
Sbjct: 667 TPNERPQGSDICTSWPRPI 685
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 45/331 (13%)
Query: 73 EVVVGGMHTVCLTEDGKVYTW-----GCNDEGALGREAEGDSEFIPQTVNLPKKAVQ-IS 126
+V G H +T + ++YTW G G LG L K+VQ +S
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVS 414
Query: 127 AGDSHSVALLEDGTVYAWGSFRDSHGSMGLK----GEGIQKTPLKLESVSGIVKIASGAD 182
G +V + ++G +Y++GS D +G +G+ E ++ + + +++ G
Sbjct: 415 CGSDFTVCITDEGQLYSFGS--DYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDS 472
Query: 183 HFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR-KHIDDVFTG 241
H + LT ++ + GC E G+LG ++ P +V ++R I +V G
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLGLDSEDDV----------YSPQKVEVQRGLCIVNVCCG 522
Query: 242 VYNTFISS-KGSILAFGLNNYSQLG-----------EADSEVQKSGNTCFFTPHLIKSLS 289
+F+ + G +LA GLN +++LG EA EV + + L K LS
Sbjct: 523 SDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLT-----LAKQLS 577
Query: 290 DKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSI 349
K ++ G+ H+ A++ G++ FG + G+LG+ + + + L K + +
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRV 637
Query: 350 ACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 380
+CG+ + A ++ ++ WG G GNG+
Sbjct: 638 SCGDEFTTAATADNHIFAWGNG-----GNGR 663
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 155/401 (38%), Gaps = 83/401 (20%)
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK---KAVQISAGDSHSVALLED 138
V + +VY WG + PQ +++ K +A Q+ AGD+H + +
Sbjct: 323 VVTSRSSEVYVWG-------------GGKTTPQKLDVFKGGWRARQVCAGDAHFAVVTVE 369
Query: 139 GTVYAWGSFR---DSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVMLTSRGNL 193
+Y W + + HG +G + P +E + G + K++ G+D V +T G L
Sbjct: 370 KELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQL 429
Query: 194 LTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGVYNTF-ISSKG 251
+ G G LG N G LEP V + +D V G + ++
Sbjct: 430 YSFGSDYYGCLG--------VNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSK 481
Query: 252 SILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
S+ ++G Y +LG DSE ++P ++ + G S L GK
Sbjct: 482 SVYSWGCGEYGRLG-LDSEDD------VYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGK 534
Query: 312 IYAFGRHDYGRLGLKNVSEPV------------TEPTPIPSLQDKTITSIACGNCVSFAI 359
+ A G +++ +LGL + + T T L I SI+ G + AI
Sbjct: 535 VLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAI 594
Query: 360 DSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGR-LGLKNVSEPVTEPTPIP 418
D G L +G QLG G DY + LG+ + P
Sbjct: 595 DERGRLLTFGSNKCGQLGVG------------------DYRKHLGINLLGGP-------- 628
Query: 419 SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGK 459
L K + ++CG+ + A ++ ++ WG G GNG+
Sbjct: 629 -LGGKQVIRVSCGDEFTTAATADNHIFAWGNG-----GNGR 663
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 32 CKTGGGVVLTCGQGDTGQLGL----GPDVME--RKTFALVEDLDNVVEVVVGGMHTVCLT 85
C T G + + G G LG+ G +V+E F L E +D +V G H + LT
Sbjct: 422 CITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVD---QVSCGDSHIMALT 478
Query: 86 EDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKK--AVQISAGDSHSVALLEDGTVYA 143
VY+WGC + G LG ++E D + PQ V + + V + G S L G V A
Sbjct: 479 RSKSVYSWGCGEYGRLGLDSEDDV-YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLA 537
Query: 144 WGSFRDSHGSMGLKG--------EGIQKTPL-------KLESVSGIVKIASGADHFVMLT 188
G + H +GL E Q+ P K S I I+ G H +
Sbjct: 538 CG--LNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAID 595
Query: 189 SRGNLLTAGCPEQGQLG 205
RG LLT G + GQLG
Sbjct: 596 ERGRLLTFGSNKCGQLG 612
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 296 LASGQHHSLALNSEGKIYAF-----GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA 350
+ +G H + E ++Y + G +G+LG + + +P + LQ K++ ++
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRAS-YRQPKHVEKLQGKSVQKVS 414
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGL-KNVSE 409
CG+ + I EG++Y+FG YG LG+ ++
Sbjct: 415 CGSDFTVCI--------------------------TDEGQLYSFGSDYYGCLGVNQSAGS 448
Query: 410 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI 469
V EP + ++ + ++CG+ A+ +Y WG G +LG EDD+ P K+
Sbjct: 449 EVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKV 508
Query: 470 EGKQLNNYTVLQVASGGQHSVIL 492
E ++ ++ V G S +L
Sbjct: 509 EVQR--GLCIVNVCCGSDGSFLL 529
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 166/407 (40%), Gaps = 36/407 (8%)
Query: 96 NDEGALGREAEGDSEFIPQTVN---LPKKAVQISAGDSHSVALLEDGTVYAWGSFRDSHG 152
N G LG + D +PQ +N P+ +I+ G HS + + G ++ G +D
Sbjct: 23 NSYGQLGLGHKEDV-LLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQL 81
Query: 153 SMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSA 212
+G + TP K I ++A G D +MLT G +L+ G GQLG
Sbjct: 82 GLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLG------V 135
Query: 213 SRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQ 272
RR + P + L ++ + + G+ + ++ I+ + G Q
Sbjct: 136 PHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQ 192
Query: 273 KSGNTCFFT---PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVS 329
FFT P + L + K + +G HS +L G++Y +G + +G+L +
Sbjct: 193 TL--PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF 250
Query: 330 EPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
PV + Q++ +T+I G A G ++ WG + QLG E EG
Sbjct: 251 LPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLE----TYEG 306
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQD--KTITSIACGNCVSFAIDSEGVLYGW 447
+ + D S P P +PS T ++CG+ + AI GV Y W
Sbjct: 307 --WKLEKQD----SFLPCSRP---PNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSW 356
Query: 448 GMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G G+G E ++ P ++ L + + L V G HS+ L +
Sbjct: 357 GWNEHGMCGDGTEANVWAPKPVQA--LLSSSGLLVGCGAGHSLALCQ 401
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 157/378 (41%), Gaps = 72/378 (19%)
Query: 48 GQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREA 105
GQLGLG DV+ + +V + GG H+ +T+ G ++ G N +G LG
Sbjct: 26 GQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGL-- 83
Query: 106 EGDSEFIPQTVNLPKKAV------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGL-KG 158
G +E IP P K++ Q++ G ++ L E+G V + GS +S G +G+ G
Sbjct: 84 -GHTEDIPYFT--PCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGS--NSFGQLGVPHG 138
Query: 159 EGIQKTPLKLE-SVSGIVKIASGADHFVMLTSRGNLLTAG----------CPEQGQLGRI 207
P +E +V IA+G H V T+ G + G CP Q
Sbjct: 139 PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFF 198
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEA 267
T + SR ++ LE K + + ++ ++ G + +G N + QL
Sbjct: 199 TAKEPSR-----VTGLE------NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE 247
Query: 268 DSEV---QKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG 324
+ + QK CF ++K T + SG H +A GK++ +GR DYG+LG
Sbjct: 248 AAFLPVPQKIEAHCF---------QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Query: 325 LK----------------NVSEPVTEPTPIPSLQD--KTITSIACGNCVSFAIDSEGVLY 366
K S P P +PS T ++CG+ + AI GV Y
Sbjct: 299 RKLETYEGWKLEKQDSFLPCSRP---PNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCY 354
Query: 367 GWGMGNGYQLGNGKEDDI 384
WG G+G E ++
Sbjct: 355 SWGWNEHGMCGDGTEANV 372
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 26/171 (15%)
Query: 6 KKVLRKQAENPSQKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLGPDVMERKTFAL- 64
+ V+ + E +KV + + T G+V Q TG G + +T L
Sbjct: 141 RCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF---QWGTGLASCGRRLCPGQTLPLF 197
Query: 65 --------VEDLDN--VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQ 114
V L+N + V+ G H+ LT+ G+VY WG N G L EA F+P
Sbjct: 198 FTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA----AFLPV 253
Query: 115 TVNLP------KKAVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGE 159
+ +K I +G +H VA E G ++ WG R +G +G K E
Sbjct: 254 PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG--RADYGQLGRKLE 302
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 24/139 (17%)
Query: 69 DNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR--------EAEGDSEFIPQTV---N 117
+ V + G H V TE GK++TWG D G LGR + E F+P + +
Sbjct: 265 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNS 324
Query: 118 LPKK------AVQISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV 171
+P A ++S G H++A++ G Y+WG + HG G E P ++++
Sbjct: 325 MPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWG--WNEHGMCGDGTEANVWAPKPVQAL 381
Query: 172 ---SGIVKIASGADHFVML 187
SG++ + GA H + L
Sbjct: 382 LSSSGLL-VGCGAGHSLAL 399
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 18/291 (6%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGD-SEFIPQTVNLPKKAVQISAG 128
+ V G T CLT+ G + T+G G LG + D S+ L + VQ++ G
Sbjct: 392 TIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACG 451
Query: 129 DSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGADHFVM 186
SH +AL + ++AWG R G +GL P ++ G ++ G D ++
Sbjct: 452 ASHVLALSTERELFAWG--RGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMI 509
Query: 187 LTSRGNLLTAGCPEQGQLGRI-----TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
LT G L G +LG + + +SF G PL ++ + + G
Sbjct: 510 LTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLG 569
Query: 242 -VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQ 300
++ +++ G FG N + QLG ++ P ++ L K M+A G
Sbjct: 570 TAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRA-------PCKVQGLEGIKMAMVACGD 622
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
++A+ +E ++Y++G+ GRLG ++ + P + T+TS++C
Sbjct: 623 AFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 138/338 (40%), Gaps = 44/338 (13%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV------ 123
VV+V G +T G++ W GA G +P V P+
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGA------GGGSLLPGAVEQPQPQFISRFLE 386
Query: 124 --------QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG-- 173
++ GD + L + G + +GS S+G +G P +E++ G
Sbjct: 387 GQSGVTIKHVACGDFFTACLTDRGIIMTFGS--GSNGCLGHGSLTDISQPTIVEALLGYE 444
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKR- 232
+V++A GA H + L++ L G + G+LG T+ S S P +VP+
Sbjct: 445 MVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSC----------PQQVPMPPG 494
Query: 233 KHIDDVFTGVYNTFI-SSKGSILAFGLNNYSQLG-------EADSEVQKSGNTCFFTPHL 284
+ V G+ ++ I + G LA G N +++LG E Q+ FT
Sbjct: 495 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLG 554
Query: 285 IKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK 344
L + + G HS A+ + G Y FG + +G+LG N P + L+
Sbjct: 555 SAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLG-TNTRRGSRAPCKVQGLEGI 613
Query: 345 TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ +ACG+ + AI +E +Y WG G +LG ED
Sbjct: 614 KMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDED 651
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 157/393 (39%), Gaps = 82/393 (20%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGC 198
+VYAWG G +G TPL+L + + +V++A+G +T G L+
Sbjct: 313 SVYAWG------GGLG--------TPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEA 358
Query: 199 PEQGQ------LGRITQRSASRNARRGMSFLEPGEVPLKRKHID--DVFTGVYNTFISSK 250
P G G + Q +R FLE G+ + KH+ D FT ++ +
Sbjct: 359 PPLGAGGGSLLPGAVEQPQPQFISR----FLE-GQSGVTIKHVACGDFFTAC----LTDR 409
Query: 251 GSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEG 310
G I+ FG + LG T P ++++L + +A G H LAL++E
Sbjct: 410 GIIMTFGSGSNGCLGHGSL-------TDISQPTIVEALLGYEMVQVACGASHVLALSTER 462
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGM 370
+++A+GR D GRLGL E + P +P + + CG S + G G
Sbjct: 463 ELFAWGRGDSGRLGL-GTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGS 521
Query: 371 GNGYQLGN-----GKE-----------------------------------DDILNSEGK 390
+LG G+E + + G
Sbjct: 522 NRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGD 581
Query: 391 IYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG 450
Y FG + +G+LG N P + L+ + +ACG+ + AI +E +Y WG G
Sbjct: 582 CYTFGSNQHGQLG-TNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKG 640
Query: 451 NGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVA 483
+LG ED L P ++ + + YTV V+
Sbjct: 641 ARGRLGRRDEDAGL-PRPVQLDETHPYTVTSVS 672
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTEDGK 89
C T G+++T G G G LG G + + +VE L +V+V G H + L+ + +
Sbjct: 405 CLTDRGIIMTFGSGSNGCLGHG-SLTDISQPTIVEALLGYEMVQVACGASHVLALSTERE 463
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSF 147
++ WG D G LG +S PQ V +P ++A ++ G S+ L G A GS
Sbjct: 464 LFAWGRGDSGRLGLGTR-ESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSN 522
Query: 148 RDSHGSMGLKGEGIQKTPLKLESV----------------SGIVKIASGADHFVMLTSRG 191
R +GL + + P+ + V ++ I G H +T+ G
Sbjct: 523 R--FNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASG 580
Query: 192 NLLTAGCPEQGQLGRITQR 210
+ T G + GQLG T+R
Sbjct: 581 DCYTFGSNQHGQLGTNTRR 599
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 37 GVVLTCGQGDTGQLGLG-----------PDVMERKTFALV----EDLDNVVEVVVGGMHT 81
G L CG +LGL V E +F L+ D + ++ + +G H+
Sbjct: 514 GQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHS 573
Query: 82 VCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLP-KKAVQISAGDSHSVALLEDGT 140
+T G YT+G N G LG S + L K ++ GD+ +VA+ +
Sbjct: 574 AAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESE 633
Query: 141 VYAWGSFRDSHGSMGLKGE 159
VY+WG + + G +G + E
Sbjct: 634 VYSWG--KGARGRLGRRDE 650
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 31/329 (9%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTW-----GCNDEGALGREAEGDSEFIPQTVNLPKKAV-- 123
V++V +G + +T+ G++ TW G + G + +FI + +
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIK 401
Query: 124 QISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSG--IVKIASGA 181
+S GD + L + G + +GS S+G +G P +E++ G +V+++ GA
Sbjct: 402 SVSCGDLFTTCLTDRGIIMTFGS--GSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGA 459
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
H + +T+ + + G + G+LG TQ S N + +S P + +R V G
Sbjct: 460 SHVLAVTNEREVFSWGRGDNGRLGLATQDS--HNCPQQVSL--PADFEAQR-----VLCG 510
Query: 242 VYNTFI-SSKGSILAFGLNNYSQLG-EADSEVQKSGNTC----FFTPHLIKS--LSDKKF 293
V + I S++ ILA G N +++LG + S ++ + C L++S L+ +K
Sbjct: 511 VDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKI 570
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGN 353
+ G HS+A+ +G+ + FG + +G+LG + P + LQ IT ACG+
Sbjct: 571 VYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSH-RRSSRVPYQVSGLQG--ITMAACGD 627
Query: 354 CVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
+ AI +EG +Y WG G +LG +ED
Sbjct: 628 AFTLAIGAEGEVYTWGKGARGRLGRKEED 656
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 30/296 (10%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVN--LPKKAVQISA 127
+ V G + T CLT+ G + T+G G LG D P+ V L + VQ+S
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVT-QPKIVEALLGYELVQVSC 457
Query: 128 GDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTP--LKLESVSGIVKIASGADHFV 185
G SH +A+ + V++WG R +G +GL + P + L + ++ G D +
Sbjct: 458 GASHVLAVTNEREVFSWG--RGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSM 515
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEV---------PLKRKHID 236
+++++ +L G +LG + + S + SF + EV PL + I
Sbjct: 516 IMSTQHQILACGNNRFNKLG-LDKVSGTEEPS---SFCQVEEVHLFQLVQSAPLNTEKIV 571
Query: 237 DVFTGV-YNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTM 295
+ G ++ ++ KG FG N + QLG + + P+ + L + TM
Sbjct: 572 YIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSR-------VPYQVSGL--QGITM 622
Query: 296 LASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIAC 351
A G +LA+ +EG++Y +G+ GRLG K + +P + T+TS+AC
Sbjct: 623 AACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVAC 678
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 171/409 (41%), Gaps = 93/409 (22%)
Query: 140 TVYAWGSFRDSHGSMGLKGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAGC 198
+VY WGS GI TPL+L + + +++++ G + +T G L+T
Sbjct: 321 SVYTWGS-------------GI-STPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEA 366
Query: 199 PEQGQ-----LGRITQRSASRNARRGMSFLE-PGEVPLKRKHIDDVFTGVYNTFISSKGS 252
P G G + Q +R FLE V +K D+FT T ++ +G
Sbjct: 367 PSVGSGEPTLPGAVEQMQPQFISR----FLEGQSGVTIKSVSCGDLFT----TCLTDRGI 418
Query: 253 ILAFGLNNYSQLGEAD-SEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSEGK 311
I+ FG + LG + ++V + P ++++L + ++ G H LA+ +E +
Sbjct: 419 IMTFGSGSNGCLGHGNFNDVTQ--------PKIVEALLGYELVQVSCGASHVLAVTNERE 470
Query: 312 IYAFGRHDYGRLGL-----KNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++++GR D GRLGL N + V+ P D + CG S + ++ +
Sbjct: 471 VFSWGRGDNGRLGLATQDSHNCPQQVSLPA------DFEAQRVLCGVDCSMIMSTQHQIL 524
Query: 367 GWGMGNGYQLGNGK----------------------EDDILNSE---------------- 388
G +LG K + LN+E
Sbjct: 525 ACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVT 584
Query: 389 --GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYG 446
G+ + FG + +G+LG + P + LQ IT ACG+ + AI +EG +Y
Sbjct: 585 EKGQCFTFGSNQHGQLGCSH-RRSSRVPYQVSGLQG--ITMAACGDAFTLAIGAEGEVYT 641
Query: 447 WGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAKP 495
WG G +LG KE+D P ++ + + +TV VA ++++ KP
Sbjct: 642 WGKGARGRLGR-KEEDFGIPKPVQLDESHAFTVTSVACCHGNTLLAVKP 689
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 32 CKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDL--DNVVEVVVGGMHTVCLTED 87
C T G+++T G G G LG G DV + K +VE L +V+V G H + +T +
Sbjct: 412 CLTDRGIIMTFGSGSNGCLGHGNFNDVTQPK---IVEALLGYELVQVSCGASHVLAVTNE 468
Query: 88 GKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--KAVQISAGDSHSVALLEDGTVYAWG 145
+V++WG D G LG A DS PQ V+LP +A ++ G S+ + + A G
Sbjct: 469 REVFSWGRGDNGRLGL-ATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACG 527
Query: 146 SFRDSHGSMGLKG-------------------EGIQKTPLKLESVSGIVKIASGADHFVM 186
+ R +GL + +Q PL E IV I G H V
Sbjct: 528 NNR--FNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEK---IVYIDIGTAHSVA 582
Query: 187 LTSRGNLLTAGCPEQGQLGRITQRSASR 214
+T +G T G + GQLG + R +SR
Sbjct: 583 VTEKGQCFTFGSNQHGQLG-CSHRRSSR 609
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 21/148 (14%)
Query: 39 VLTCGQGDTGQLGLGP-----------DVMERKTFALVE----DLDNVVEVVVGGMHTVC 83
+L CG +LGL V E F LV+ + + +V + +G H+V
Sbjct: 523 ILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVA 582
Query: 84 LTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGTVYA 143
+TE G+ +T+G N G LG S +P V+ + + GD+ ++A+ +G VY
Sbjct: 583 VTEKGQCFTFGSNQHGQLGCSHRRSSR-VPYQVSGLQGITMAACGDAFTLAIGAEGEVYT 641
Query: 144 WGSFRDSHGSMGLKGE--GIQKTPLKLE 169
WG + + G +G K E GI K P++L+
Sbjct: 642 WG--KGARGRLGRKEEDFGIPK-PVQLD 666
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 168/412 (40%), Gaps = 34/412 (8%)
Query: 90 VYTWGCNDEGALGREAEGDSEFIPQTVNLPKKAV--QISAGDSHSVALLEDGTVYAWGSF 147
++ WG N G LG + D Q + K +I+ G HS + ++G+++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 148 RDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRI 207
+D +G E + TP K I ++A G D ++LT G +L+ G GQLG
Sbjct: 77 KDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLG-- 134
Query: 208 TQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGLNNYSQLGE 266
RR + P + L R+ + + G+ + ++ G++ +G + L
Sbjct: 135 ----VPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWG----TGLAS 183
Query: 267 ADSEVQKSGNTCFF----TPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGR 322
+ + F P + L + + + +G HS +L G++Y +G + +G+
Sbjct: 184 SGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQ 243
Query: 323 LGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKED 382
L + + + Q++ I ++ G A G ++ WG + QLG E
Sbjct: 244 LASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVE- 302
Query: 383 DILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEG 442
EG + + D L P+ +P L T I+CG+ + A+ G
Sbjct: 303 ---TREG--WESEKQDP---SLPGSGPQKGTPSCLPCLTGA--TEISCGSEHNLAVIG-G 351
Query: 443 VLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
V + WG G+G E D+ P + G L + L V G HS+ L +
Sbjct: 352 VCHSWGWNEHGMCGDGTEADVWAPKPVPG--LRFFLGLHVGCGAGHSLALCQ 401
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 162/388 (41%), Gaps = 48/388 (12%)
Query: 23 TSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG--PDVMERKTFALVEDLDNVVEVVVGGMH 80
+SEAVPT + G GQLGLG DV+ + + + + GG H
Sbjct: 7 SSEAVPT------AAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGH 60
Query: 81 TVCLTEDGKVYTWGCNDEGALGR-EAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDG 139
+ +T++G ++ G N +G LG E F P L Q++ G ++ L E+G
Sbjct: 61 SAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENG 120
Query: 140 TVYAWGSFRDSHGSMGL-KGEGIQKTPLKLESV-SGIVKIASGADHFVMLTSRGNLLTAG 197
V + GS +S G +G+ G P +E + +V IA+G H + T+ G + G
Sbjct: 121 QVLSCGS--NSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWG 178
Query: 198 CPEQGQLGRITQRSASRNARRGMSFLEPGEVP-LKRKHIDDVFTGV-YNTFISSKGSILA 255
G + + ++ EP V L+ V G ++ ++ G +
Sbjct: 179 ---TGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYV 235
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLI--KSLSDKKFTMLASGQHHSLALNSEGKIY 313
+G N + QL S P I + ++K + SG H +A GK++
Sbjct: 236 WGSNKHGQLA--------SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVF 287
Query: 314 AFGRHDYGRLGL------------KNVSEPVTEP---TP--IPSLQDKTITSIACGNCVS 356
+GR DYG+LG ++ S P + P TP +P L T I+CG+ +
Sbjct: 288 TWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGA--TEISCGSEHN 345
Query: 357 FAIDSEGVLYGWGMGNGYQLGNGKEDDI 384
A+ GV + WG G+G E D+
Sbjct: 346 LAVIG-GVCHSWGWNEHGMCGDGTEADV 372
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 301 HHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
H S A+ + ++A+G + YG+LGL + + ++ + I I G S +
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD--------------------------ILNSEGKIYAF 394
EG L+ G+ QLG G ++ IL G++ +
Sbjct: 66 DEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSC 125
Query: 395 GRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMG---N 451
G + +G+LG+ + P I L++K + SIA G + A + G ++ WG G +
Sbjct: 126 GSNSFGQLGVPHGPRRCVIPQAIELLREK-VVSIAAGLRHALAATASGTVFQWGTGLASS 184
Query: 452 GYQLGNGKEDDIL----EPMKIEGKQLNNYTVLQVASGGQHSVIL 492
G +L G+ + EP + G L N + V +G HS L
Sbjct: 185 GRRLCPGQTLPLFLTAKEPSTVTG--LENSQAVCVLAGSDHSASL 227
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 84/214 (39%), Gaps = 45/214 (21%)
Query: 34 TGGGVVLTCGQGDTGQLG------LGPDVMERKTFALVEDLDNVVEVVVGGMHTVCLTED 87
T G + G GQL L P +E + F + + V G H V T
Sbjct: 228 TDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCF----QNEKIAAVWSGWTHLVAQTVT 283
Query: 88 GKVYTWGCNDEGALGREAE-----------------GDSEFIPQTVNLPKKAVQISAGDS 130
GKV+TWG D G LGR E G + P + A +IS G
Sbjct: 284 GKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSE 343
Query: 131 HSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-----VKIASGADHFV 185
H++A++ G ++WG + H G+ G+G + + V G+ + + GA H +
Sbjct: 344 HNLAVI-GGVCHSWG--WNEH---GMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSL 397
Query: 186 MLTSRGNLLTAGCPEQGQLGRITQRS--ASRNAR 217
L L P GQ +T S A++ AR
Sbjct: 398 ALCQLPAL-----PALGQHPSVTSPSPDATKEAR 426
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 178/406 (43%), Gaps = 76/406 (18%)
Query: 18 QKVFVTSEAVPTLKCKTGGGVVLTCGQGDTGQLGLG-------PDVMERKTFALVEDLDN 70
QK+ + S T G + T G G G+LG G P ++E F +
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVE---FFQTKPSLR 244
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCND--EGALGREAEGDSEFIPQTVNL---------- 118
VV + GG H++ LT GKVY+WG ND + LG + +PQ +N
Sbjct: 245 VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNN 304
Query: 119 --------------------------------PKKAVQISAGDSHSVALLEDGTVYAWGS 146
K V++S G + S + + G ++ +G
Sbjct: 305 NNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFG- 363
Query: 147 FRDSHGSMGLKGEGI--QKTPLKLESVSG--IVKIASGADHFVMLTSRGNLLTAGCPEQG 202
R HG +GL + + Q TP ++S+ G I+ ++SG H ++LT++G + + G +QG
Sbjct: 364 -RGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQG 422
Query: 203 QLG---RITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTF-ISSKGSILAFGL 258
QLG Q++ + + + + + P+ +I V G Y++ IS A+G
Sbjct: 423 QLGIGCFSNQQTIPKQIQWFQTSQQQQQQPI---NIIKVSAGGYHSIAISDNNDTYAWGR 479
Query: 259 NNYSQLGEADSEVQKSGNTCFFTPHLIKS----LSDKKFTMLASGQHHSLALNSEGKIYA 314
++Y LG + +VQ N P LI S + + KF ++SG H++A++ +G +Y+
Sbjct: 480 SDYGVLGTS-IDVQGDRNL----PVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYS 534
Query: 315 FGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 360
+G + RLG K+ +T + +D CG ++ ++
Sbjct: 535 WGCNAGQRLGFKSDENQLTPKKCFINSKDSKPLLFTCGEIITIIVE 580
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 247 ISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLAL 306
I+ KG + FG ++ +LG + + TP L++SL ++SG HSL L
Sbjct: 353 ITDKGLLFTFGRGDHGRLGLGEQSLLMQS-----TPKLVQSLQGHFIIDMSSGGGHSLVL 407
Query: 307 NSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLY 366
++G +++FGR+D G+LG+ S T P I Q N + +
Sbjct: 408 TNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVS-------- 459
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLK-NVSEPVTEPTPIPS----LQ 421
G ++ YA+GR DYG LG +V P I S +
Sbjct: 460 ----------AGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVD 509
Query: 422 DKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMK 468
+ ++ G + A+ +G LY WG G +LG +++ L P K
Sbjct: 510 NVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPV-TEPTPIPSLQDKTITSIA 350
K L+ G + S + +G ++ FGR D+GRLGL S + + P + SLQ I ++
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMS 398
Query: 351 CGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEP 410
G G +L ++G +++FGR+D G+LG+ S
Sbjct: 399 SG--------------------------GGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQ 432
Query: 411 VTEPTPIPSLQDK--------TITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG--KE 460
T P I Q I ++ G S AI Y WG + LG +
Sbjct: 433 QTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQ 492
Query: 461 DDILEPMKIEGKQ--LNNYTVLQVASGGQHSVILA 493
D P+ I ++N + V+SG QH+V ++
Sbjct: 493 GDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMS 527
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 62 FALVEDLDNVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFI--PQTVNLP 119
F+ + + +V + G +H+ +T+ G +YT+G +G LG+ G+ E P+ V
Sbjct: 181 FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFG---DGLLGKLGHGNLESYSSPKLVEFF 237
Query: 120 K-----KAVQISAGDSHSVALLEDGTVYAWG 145
+ + V I+ G HS+AL G VY+WG
Sbjct: 238 QTKPSLRVVSIANGGKHSLALTICGKVYSWG 268
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 291 KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK---TIT 347
+K ++++G HS + +G +Y FG G+LG N+ E + P + Q K +
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNL-ESYSSPKLVEFFQTKPSLRVV 246
Query: 348 SIACGNCVSFAIDSEGVLYGWGMGNGYQLGNG 379
SIA G S A+ G +Y WG + QLG G
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK---TITSIACGNCVSFAIDS 440
+ +G +Y FG G+LG N+ E + P + Q K + SIA G S A+
Sbjct: 202 FITDQGNLYTFGDGLLGKLGHGNL-ESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTI 260
Query: 441 EGVLYGWGMGNGYQLGNG 458
G +Y WG + QLG G
Sbjct: 261 CGKVYSWGGNDSCQLGLG 278
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 155/385 (40%), Gaps = 70/385 (18%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLT----AGCPEQGQLGRITQRSASRNA 216
IQ P +LE I A G F +L+S+ +T G + QLG R ++
Sbjct: 96 IQPVPYRLELDQKISSAACGYG-FTLLSSKTADVTKVWGMGLNKDSQLGFHRSR---KDK 151
Query: 217 RRGMSF-LEPGEV--PLKRKHIDDVFT----GVYNTFISSKGSILAFGLNNYSQLGEADS 269
RG + LEP V PL R V ++ ++ + + + G N+Y Q G
Sbjct: 152 TRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVV 211
Query: 270 EVQKSGNTCFFTPHLIKSLSD--KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
E N + H + + D + +A GQ HSL L +G++Y+ G G+ GL +
Sbjct: 212 E-----NEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGH 266
Query: 328 VSEPVTEPTPIP-SLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGN-------- 378
+ + PT + L + +A A+ ++G L+GWG QL +
Sbjct: 267 YN-ITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVN 325
Query: 379 -------------------GKEDDILNSEGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIP 418
G +LN EG ++ +G YG LG N+ E P
Sbjct: 326 VPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPP 382
Query: 419 SLQDKT-------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIE- 470
+L T ++ I CG A+ ++G L+ WG LG G+ +D P ++
Sbjct: 383 TLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM 442
Query: 471 -GKQLNNYTVLQVASGGQHSVILAK 494
G+ ++ VA G H V LAK
Sbjct: 443 PGEPVD------VACGVDHMVTLAK 461
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 34/277 (12%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-----EAEGDSEFIPQTVNLPKKAVQ 124
V++V G H++ LT+ V++ G N G GR E +S + + + + VQ
Sbjct: 175 RVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQ 234
Query: 125 ISAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKL-ESVSG--IVKIASGA 181
++ G HS+ L + G VY+ G D G GL I +P KL ++G ++++A+
Sbjct: 235 VACGQDHSLFLTDKGEVYSCGWGAD--GQTGLGHYNITSSPTKLGGDLAGVNVIQVATYG 292
Query: 182 DHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTG 241
D + +++ G L G E QL +T S N R + F G+V G
Sbjct: 293 DCCLAVSADGGLFGWGNSEYLQLASVTD-STQVNVPRCLHFSGVGKVR------QAACGG 345
Query: 242 VYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--------SDKKF 293
++ +G + +G Y LG+ + V+ + P +I + +
Sbjct: 346 TGCAVLNGEGHVFVWG---YGILGKGPNLVESA------VPEMIPPTLFGLTEFNPEIQV 396
Query: 294 TMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + G H AL ++G+++ +G++ G LG+ + +
Sbjct: 397 SRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLED 433
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 47/323 (14%)
Query: 89 KVYTWGCNDEGALG-----REAEGDSEFI--PQTVNLP------KKAVQISAGDSHSVAL 135
KV+ G N + LG ++ E++ P V+LP + +Q+S G +HS+ L
Sbjct: 130 KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVL 189
Query: 136 LEDGTVYAWGSFRDSHGSMGLK---GEGIQKTPL--KLESVSG-IVKIASGADHFVMLTS 189
+ V++ G+ +S+G G K E ++ +++ G +V++A G DH + LT
Sbjct: 190 TDREGVFSMGN--NSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTD 247
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFT-GVYNTFIS 248
+G + + G GQ G S + G L ++ V T G +S
Sbjct: 248 KGEVYSCGWGADGQTGLGHYNITSSPTKLGGD--------LAGVNVIQVATYGDCCLAVS 299
Query: 249 SKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNS 308
+ G + +G + Y QL Q + P + K A G LN
Sbjct: 300 ADGGLFGWGNSEYLQLASVTDSTQVN------VPRCLHFSGVGKVRQAACGGTGCAVLNG 353
Query: 309 EGKIYAFGRHDYGRLGL-KNVSEPVTEPTPIPSLQDKT-------ITSIACGNCVSFAID 360
EG ++ +G YG LG N+ E P+L T ++ I CG A+
Sbjct: 354 EGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALT 410
Query: 361 SEGVLYGWGMGNGYQLGNGKEDD 383
++G L+ WG LG G+ +D
Sbjct: 411 NKGELFVWGKNIRGCLGIGRLED 433
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG G GQ GLG + L DL NV++V G + ++ DG ++
Sbjct: 246 TDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLF 305
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG ++ L + +P+ ++ K Q + G + L +G V+ WG
Sbjct: 306 GWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGIL 365
Query: 150 SHGSMGLKGEGIQKTPLKLESVS------GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G ++ + P L ++ + +I G HF LT++G L G +G
Sbjct: 366 GKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGC 425
Query: 204 LG 205
LG
Sbjct: 426 LG 427
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 168/424 (39%), Gaps = 77/424 (18%)
Query: 39 VLTCGQGDTGQLGLG--PDVMERKTFAL----VEDLDNVVEVVVGGMHTVCLTEDGKVYT 92
+ + G G+ GQLG+G D + T L +D + V ++V GG H++ + ++G +YT
Sbjct: 3 IYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLYT 62
Query: 93 WGCNDEGALGREAE-----------------------GDSEFIPQTVNLPK----KAVQI 125
+G ND G LG + + IP +N K K
Sbjct: 63 FGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKNC 122
Query: 126 SAGDSHSVALLEDGTVYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGIVKIASGADHFV 185
S G +HS+A +G +Y+WGS +SHG +G+ + L + + ++
Sbjct: 123 SGGWAHSLACDNNGNIYSWGS--NSHGQLGIDTTCSLNSTLSTSNNKNNNNNNNNNNNNN 180
Query: 186 MLTSRGNLLTAGCPEQ--GQLGRITQRSASRNARRGMSFLEPGEVPLKRK-HIDDVFTGV 242
+ N G + + + R+ ++ + E+ K I V G+
Sbjct: 181 NNNNNNNNNNNNNNNNSGGVIKKKIVLKKKKVERKNLNEPKLIEILFNNKIRIVSVSCGM 240
Query: 243 YNTF-ISSKGSILAFGLNNYSQLGE-------------------ADSEVQKSGNTCFFTP 282
++ +SS+ + +G N + QL AD VQ S P
Sbjct: 241 RHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQDS-------P 293
Query: 283 HLIKSLSDKKFTMLASGQHHSLALNSEGK-IYAFGRHDYGRLGLKN-----------VSE 330
LI ++ K ++ G H+L L+ K + +FG++ +G+LG N +S
Sbjct: 294 KLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVIDISS 353
Query: 331 PVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGK 390
+ + SL D I I CG S + ++ LY G G LG+ ++ + NS
Sbjct: 354 FILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNSNSN 413
Query: 391 IYAF 394
+
Sbjct: 414 QFKL 417
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 49/296 (16%)
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLE--------- 224
IV ++ G H + L+S ++ GC + GQL + ++ ++ + +
Sbjct: 233 IVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQDS 292
Query: 225 PGEVPLKRK-HIDDVFTGVYNTFISSKG--SILAFGLNNYSQLGEADSEVQKSGNTC--- 278
P + K + I + G +T + ++L+FG N + QLG + Q N C
Sbjct: 293 PKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQS--NPCVID 350
Query: 279 ---FFTP-HLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLG-LKNVSEPVT 333
F P KSL+D K + G +S L ++ K+Y GR +YG LG +++S +
Sbjct: 351 ISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNS 410
Query: 334 EPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEGKIYA 393
L ++ N F+I SE +L Q+ + ++ N+ IY+
Sbjct: 411 NSNQFKLLNSESFNENKIKN---FSIGSEHIL--------IQVYSNDNNNNNNNNNNIYS 459
Query: 394 FGRHDYGRLGLKNVSEPV---------TEPTPIPSLQ--DKTITSIACGNCVSFAI 438
FG +++ +LGL EP+ + P +PS++ DK++ GN SF I
Sbjct: 460 FGWNEHYQLGL---CEPIIIGKDGDNKSFPQLLPSIKGNDKSLVKAGGGN--SFFI 510
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 55/301 (18%)
Query: 58 ERKTF---ALVEDLDN----VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDS- 109
ERK L+E L N +V V G H++ L+ + VY WGCN G L +G+S
Sbjct: 213 ERKNLNEPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSL 272
Query: 110 -----------------EFIPQTVNLPK--KAVQISAGDSHSVAL-LEDGTVYAWGSFRD 149
+ P+ +N K +QIS G H++ L + V ++G ++
Sbjct: 273 KSNNNNNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFG--QN 330
Query: 150 SHGSMGLKGEGIQKTPLKLESVSGIV--------------KIASGADHFVMLTSRGNLLT 195
G +G Q P ++ S I+ +I G + +LT++ L
Sbjct: 331 KFGQLGNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYI 390
Query: 196 AGCPEQGQLG---RITQRSASRNARRGMSFLEPGEVPLKR-----KHI-DDVFTGVYNTF 246
G E G LG ++ +++ N + ++ E +K +HI V++ N
Sbjct: 391 CGRGEYGILGDNRDLSLDNSNSNQFKLLNSESFNENKIKNFSIGSEHILIQVYSNDNNNN 450
Query: 247 ISSKGSILAFGLNNYSQLGEADS-EVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLA 305
++ +I +FG N + QLG + + K G+ F P L+ S+ +++ +G +S
Sbjct: 451 NNNNNNIYSFGWNEHYQLGLCEPIIIGKDGDNKSF-PQLLPSIKGNDKSLVKAGGGNSFF 509
Query: 306 L 306
+
Sbjct: 510 I 510
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 311 KIYAFGRHDYGRLGLKNVSEPVTEPT---PIPSLQD-KTITSIACGNCVSFAIDSEGVLY 366
KIY++G + G+LG+ N + V+ PT P +D + + I G C S I G LY
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 367 GWGMGNGYQLGNGKEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDK-TI 425
+G + QLG +NS + + + + + + IP++ + I
Sbjct: 62 TFGSNDSGQLG-------INSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKI 114
Query: 426 TSIACGNCV-----SFAIDSEGVLYGWGMGNGYQLG 456
SI NC S A D+ G +Y WG + QLG
Sbjct: 115 NSIKIKNCSGGWAHSLACDNNGNIYSWGSNSHGQLG 150
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 282 PHLIKSLSDKKFTMLA--SGQHHSLALNSEGKIYAFGRHDYGRL-------GLK------ 326
P LI+ L + K +++ G HS+AL+SE +Y +G + +G+L LK
Sbjct: 220 PKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNN 279
Query: 327 ---NVSEPVTEPTP--IPSLQDKTITSIACG--NCVSFAIDSEGVLYGWGMGNGYQLGNG 379
++++P+ + +P I + I I+CG + + I+ + VL +G QLGNG
Sbjct: 280 NINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVL-SFGQNKFGQLGNG 338
Query: 380 KEDDILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAID 439
D N + ++S + + SL D I I CG S +
Sbjct: 339 NFIDQSNP---------------CVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLT 383
Query: 440 SEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSV 490
++ LY G G LG+ ++ + ++ N + +L S ++ +
Sbjct: 384 NQDKLYICGRGEYGILGDNRD------LSLDNSNSNQFKLLNSESFNENKI 428
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 332 VTEPTPIPSLQDKTI--TSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILNSEG 389
+ EP I L + I S++CG S A+ SE +YGWG QL N + + L S
Sbjct: 217 LNEPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNN 276
Query: 390 KIYAFGRHDYGRLGLKNVSEPVTEPTP--IPSLQDKTITSIACG--NCVSFAIDSEGVLY 445
+ ++++P+ + +P I + I I+CG + + I+ + VL
Sbjct: 277 NNNN----------INDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVL- 325
Query: 446 GWGMGNGYQLGNGKEDDILEPMKIE----------GKQLNNYTVLQVASGGQHSVILAK 494
+G QLGNG D P I+ K LN+ + ++ G +S +L
Sbjct: 326 SFGQNKFGQLGNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTN 384
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 38/152 (25%)
Query: 89 KVYTWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQ----ISAGDSHSVALLEDGTVY 142
K+Y+WG + G LG DS P V P KK + I G HS+ ++++G +Y
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 143 AWGSFRDSHGSMGLKGE------------------------GIQKTP-----LKLESVSG 173
+GS + G +G+ Q P K+ S+
Sbjct: 62 TFGS--NDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIK- 118
Query: 174 IVKIASGADHFVMLTSRGNLLTAGCPEQGQLG 205
I + G H + + GN+ + G GQLG
Sbjct: 119 IKNCSGGWAHSLACDNNGNIYSWGSNSHGQLG 150
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 157/383 (40%), Gaps = 66/383 (17%)
Query: 161 IQKTPLKLESVSGIVKIASGADHFVMLTSRGNLLT----AGCPEQGQLGRITQRSASRNA 216
IQ P +LE I A G F +L+S+ +T G + QLG R ++
Sbjct: 93 IQPVPYRLELDHKISSAACGYG-FTLLSSKTKDVTKVWGMGLNKDSQLGFHRSR---KDK 148
Query: 217 RRGMSF-LEPGEVPL-----KRKHIDDVFTG-VYNTFISSKGSILAFGLNNYSQLGEADS 269
RG + LEP VPL + + V G ++ ++ + + + G N++ Q G
Sbjct: 149 TRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVV 208
Query: 270 EVQKSGNTCFFTPHLIKSLSD--KKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKN 327
E + + H + + D + + GQ HSL L +G++Y+ G G+ GL +
Sbjct: 209 E-----DEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGH 263
Query: 328 VSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQL----------- 376
+ T L T+ +A A+ ++G ++GWG QL
Sbjct: 264 YNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV 323
Query: 377 -------GNGKEDD---------ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSL 420
G GK +LN+EG ++ +G G+ G K + + E P P+L
Sbjct: 324 PRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGK-GPKLLETAIPEMIP-PTL 381
Query: 421 QDKT-------ITSIACGNCVSFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKI--EG 471
T ++ I CG A+ ++G L+ WG LG G+ +D P ++ G
Sbjct: 382 FGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPG 441
Query: 472 KQLNNYTVLQVASGGQHSVILAK 494
+ ++ VA G H V LAK
Sbjct: 442 EPVD------VACGVDHMVTLAK 458
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 38/279 (13%)
Query: 70 NVVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGR-----EAEGDSEFIPQTVNLPKKAVQ 124
V++V G H++ LT+ V++ G N G GR E +S + + + + VQ
Sbjct: 172 KVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQ 231
Query: 125 ISAGDSHSVALLEDGTVYA--WGSFRDSHGSMGLKGEGIQKTPLKL-ESVSG--IVKIAS 179
+ G HS+ L + G VY+ WG + G GL I TP KL ++G +V++A+
Sbjct: 232 VVCGQDHSLFLTDKGEVYSCGWG----ADGQTGLGHYNITSTPSKLGGDLAGVTVVQVAT 287
Query: 180 GADHFVMLTSRGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVF 239
D + L++ G + G E QL +T S N R + F G+V K +
Sbjct: 288 YGDCCLALSADGGVFGWGNSEYLQLASVTD-STQVNVPRCLPFSGVGKV----KQVACGG 342
Query: 240 TGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--------SDK 291
TG ++++G + +G Y LG+ ++ + P +I +
Sbjct: 343 TGC--AVLNAEGHVFVWG---YGILGKGPKLLETA------IPEMIPPTLFGLTEFNPEV 391
Query: 292 KFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSE 330
+ + + G H AL ++G+++ +G++ G LG+ + +
Sbjct: 392 QVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLED 430
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 43/321 (13%)
Query: 89 KVYTWGCNDEGALG-----REAEGDSEFI--PQTVNLP------KKAVQISAGDSHSVAL 135
KV+ G N + LG ++ E++ P V LP K +Q+S G +HS+ L
Sbjct: 127 KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVL 186
Query: 136 LEDGTVYAWGSFRDSHGSMGLK--GEGIQKTPLKLESVSG----IVKIASGADHFVMLTS 189
+ V++ G+ +SHG G K + + K+ + +V++ G DH + LT
Sbjct: 187 TDREGVFSMGN--NSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTD 244
Query: 190 RGNLLTAGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISS 249
+G + + G GQ G S ++ G G ++ D +S+
Sbjct: 245 KGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLA--GVTVVQVATYGDCCLA-----LSA 297
Query: 250 KGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLASGQHHSLALNSE 309
G + +G + Y QL Q + P + K +A G LN+E
Sbjct: 298 DGGVFGWGNSEYLQLASVTDSTQVN------VPRCLPFSGVGKVKQVACGGTGCAVLNAE 351
Query: 310 GKIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKT-------ITSIACGNCVSFAIDSE 362
G ++ +G G+ G K + + E P P+L T ++ I CG A+ ++
Sbjct: 352 GHVFVWGYGILGK-GPKLLETAIPEMIP-PTLFGLTEFNPEVQVSQIRCGLSHFAALTNK 409
Query: 363 GVLYGWGMGNGYQLGNGKEDD 383
G L+ WG LG G+ +D
Sbjct: 410 GELFVWGKNIRGCLGIGRLED 430
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 10/182 (5%)
Query: 34 TGGGVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVY 91
T G V +CG G GQ GLG + L DL VV+V G + L+ DG V+
Sbjct: 243 TDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 92 TWGCNDEGALGREAEGDSEFIPQTVNLP--KKAVQISAGDSHSVALLEDGTVYAWGSFRD 149
WG ++ L + +P+ + K Q++ G + L +G V+ WG
Sbjct: 303 GWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGIL 362
Query: 150 SHGSMGLKGEGIQKTPLKLESVS------GIVKIASGADHFVMLTSRGNLLTAGCPEQGQ 203
G L+ + P L ++ + +I G HF LT++G L G +G
Sbjct: 363 GKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGC 422
Query: 204 LG 205
LG
Sbjct: 423 LG 424
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 29/126 (23%)
Query: 39 VLTCGQGDTGQLGLGPDVMERKTFA------LVEDLD-NVVEVVVGGMHTVCLTEDGKVY 91
V + G GQ G V+E + ++ ++D D VV+VV G H++ LT+ G+VY
Sbjct: 192 VFSMGNNSHGQCGR--KVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVY 249
Query: 92 T--WGCNDEGALGREAEGDSEFIPQTVNLPKK---------AVQISAGDSHSVALLEDGT 140
+ WG + + LG + P K VQ++ +AL DG
Sbjct: 250 SCGWGADGQTGLGHY---------NITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGG 300
Query: 141 VYAWGS 146
V+ WG+
Sbjct: 301 VFGWGN 306
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 27/256 (10%)
Query: 85 TEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPKKA----VQISAGDSHSVALLEDGT 140
T+ VYTWG N LG ++ +S+ P+ V+L ++ Q+ HSV L + G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQ-NSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQ 197
Query: 141 VYAWGSFRDSHGSMGLKGEGIQKTPLKLESVSGI-----VKIASGADHFVMLTSRGNLLT 195
VY G HG G G G ++T L V G+ ++A+ DH V+LT G + T
Sbjct: 198 VYTCG-----HGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYT 252
Query: 196 AGCPEQGQLGRITQRSASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILA 255
G QLG I S+ R+ + LK + I V G ++T + ++ ++
Sbjct: 253 FGLNIFHQLGIIPPPSSCNVPRQIQAKY------LKGRTIIGVAAGRFHTVLWTREAVYT 306
Query: 256 FGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSL--SDKKFTMLASGQHHSLALNSEGKIY 313
GLN G+ + +G C P + +L D +++A+ ++ + + G IY
Sbjct: 307 MGLNG----GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIY 362
Query: 314 AFGRHDYGRLGLKNVS 329
+ ++ K ++
Sbjct: 363 LLADYQCKKMASKQLN 378
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLD--NVVEVVVGGMHTVCLTEDGKVYTWG 94
G V TCG G G+LG G D LVE L+ N +V HTV LTEDG VYT+G
Sbjct: 196 GQVYTCGHGPGGRLGHG-DEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 95 CNDEGALGREAEGDSEFIPQTVNLP----KKAVQISAGDSHSVALLEDGTVYAWG 145
N LG S +P+ + + + ++AG H+V L VY G
Sbjct: 255 LNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMG 308
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 238 VFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFTPHLIKSLSDKKFTMLA 297
V ++ F+S KG + G +LG D + TC P L++ L+ + +A
Sbjct: 183 VLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQ------TCL-VPRLVEGLNGHNCSQVA 235
Query: 298 SGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPIPS--LQDKTITSIACGNCV 355
+ + H++ L +G +Y FG + + +LG+ P I + L+ +TI +A G
Sbjct: 236 AAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFH 295
Query: 356 SFAIDSEGVLYGWGMGNGYQLG 377
+ E V Y G+ NG QLG
Sbjct: 296 TVLWTREAV-YTMGL-NGGQLG 315
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 71 VVEVVVGGMHTVCLTEDGKVYTWGCNDEGALGREAEGDSEFIPQTVNLPK--------KA 122
+ +VV+ H+V L++ G+VYT G G GR GD QT +P+
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCG---HGPGGRLGHGDE----QTCLVPRLVEGLNGHNC 231
Query: 123 VQISAGDSHSVALLEDGTVYAWG 145
Q++A H+V L EDG VY +G
Sbjct: 232 SQVAAAKDHTVVLTEDGCVYTFG 254
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 435 SFAIDSEGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
S + +G +Y G G G +LG+G E L P +EG LN + QVA+ H+V+L +
Sbjct: 189 SVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEG--LNGHNCSQVAAAKDHTVVLTE 246
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 30/159 (18%)
Query: 365 LYGWGMGNGYQLGNGKEDD----------------------------ILNSEGKIYAFGR 396
+Y WG + LG+G ++ L+ +G++Y G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 397 HDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG 456
GRLG + + P + L + +A + + +G +Y +G+ +QLG
Sbjct: 204 GPGGRLGHGD-EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Query: 457 NGKEDDILE-PMKIEGKQLNNYTVLQVASGGQHSVILAK 494
P +I+ K L T++ VA+G H+V+ +
Sbjct: 263 IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTR 301
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 37 GVVLTCGQGDTGQLGLGPDVMERKTFALVEDLDNVV--EVVVGGMHTVCLTEDGKVYTWG 94
G V + G G GQLG G E + L+E L +V EV GG H+VC++E G +Y WG
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEP-RLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 95 CNDEGALGREAEGDSEFIPQTVNLPKKAVQISAGDSHSVALLEDGT-VYAWGSFRDSHGS 153
N+ G L +P T NL + ++ + L EDG+ V G D +
Sbjct: 236 WNESGQLA---------LP-TRNLAEDGETVA---REATELNEDGSQVKRTGGAEDGAPA 282
Query: 154 MGLKGEGIQKTP--LKLESVSGIVKIASGADHFVMLTSRGNLLTAGCPEQGQLGRITQRS 211
+ +Q P L L S VK + G+ H ++T G L T G + GQLG S
Sbjct: 283 PFI---AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 212 ASRNARRGMSFLEPGEVPLKRKHIDDVFTGVYNTFI 247
R RR F++ K+ + V G +NT++
Sbjct: 340 LDR-PRRVEYFVD------KQLQVKAVTCGPWNTYV 368
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 28/209 (13%)
Query: 279 FFTPHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGLKNVSEPVTEPTPI 338
F+ P L L ++ + G H+L L++ G+++++G +G+LG + E EP +
Sbjct: 150 FYRP-LAPELRARQLEL---GAEHALLLDAAGQVFSWGGGRHGQLGHGTL-EAELEPRLL 204
Query: 339 PSLQDKTITSIACGNCVSFAIDSEGVLYGWGMGNGYQLG------------NGKEDDILN 386
+LQ + +A G S + G +Y WG QL +E LN
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELN 264
Query: 387 SEG-KIYAFGRHDYGRLGLKNVSEPVTEPTPIPSLQDKTITSIA----CGNCVSFAIDSE 441
+G ++ G + G P P P+L D + S A CG+ + +
Sbjct: 265 EDGSQVKRTGGAEDG------APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRT 318
Query: 442 GVLYGWGMGNGYQLGNGKEDDILEPMKIE 470
G LY WG G QLG+ + P ++E
Sbjct: 319 GELYTWGWGKYGQLGHEDTTSLDRPRRVE 347
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 46/194 (23%)
Query: 222 FLEPGEVPLKRKHIDDVFTGVYNTFISSKGSILAFGLNNYSQLGEADSEVQKSGNTCFFT 281
F P L+ + ++ + + + G + ++G + QLG E +
Sbjct: 150 FYRPLAPELRARQLE--LGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE-------LE 200
Query: 282 PHLIKSLSDKKFTMLASGQHHSLALNSEGKIYAFGRHDYGRLGL--KNVSE--------- 330
P L+++L +A+G HS+ ++ G IY +G ++ G+L L +N++E
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 331 ----------------------PVTEPTPIPSLQDKTITSIA----CGNCVSFAIDSEGV 364
P P P+L D + S A CG+ + + G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 320
Query: 365 LYGWGMGNGYQLGN 378
LY WG G QLG+
Sbjct: 321 LYTWGWGKYGQLGH 334
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 384 ILNSEGKIYAFGRHDYGRLGLKNVSEPVTEP-TPI--PSLQDKTITSIACGNCVSFAIDS 440
+ +EG+ G GRL L + P P P + + G + +D+
Sbjct: 116 VPEAEGEDDPAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDA 175
Query: 441 EGVLYGWGMGNGYQLGNGKEDDILEPMKIEGKQLNNYTVLQVASGGQHSVILAK 494
G ++ WG G QLG+G + LEP +E L + +VA+GG HSV +++
Sbjct: 176 AGQVFSWGGGRHGQLGHGTLEAELEPRLLEA--LQGLVMAEVAAGGWHSVCVSE 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,582,167
Number of Sequences: 539616
Number of extensions: 9208009
Number of successful extensions: 17689
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 15456
Number of HSP's gapped (non-prelim): 576
length of query: 498
length of database: 191,569,459
effective HSP length: 122
effective length of query: 376
effective length of database: 125,736,307
effective search space: 47276851432
effective search space used: 47276851432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)